Query 019226
Match_columns 344
No_of_seqs 210 out of 1473
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 07:44:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019226.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019226hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02779 haloacid dehalogenase 100.0 5.9E-33 1.3E-37 254.9 24.9 242 63-338 36-278 (286)
2 PLN03243 haloacid dehalogenase 100.0 6.2E-29 1.3E-33 224.9 23.3 216 64-335 21-237 (260)
3 PLN02575 haloacid dehalogenase 100.0 1.5E-28 3.3E-33 230.3 24.1 218 65-338 129-347 (381)
4 PLN02770 haloacid dehalogenase 100.0 9.1E-29 2E-33 223.0 21.8 215 64-331 19-234 (248)
5 TIGR03351 PhnX-like phosphonat 100.0 4.5E-28 9.8E-33 214.6 23.6 204 67-325 1-212 (220)
6 PRK13288 pyrophosphatase PpaX; 100.0 3.1E-28 6.7E-33 214.8 22.4 210 65-339 1-212 (214)
7 PRK13226 phosphoglycolate phos 100.0 2.1E-28 4.7E-33 218.1 20.7 190 65-310 10-199 (229)
8 COG0637 Predicted phosphatase/ 100.0 2.3E-28 5E-33 216.4 20.0 217 66-339 1-218 (221)
9 PRK10826 2-deoxyglucose-6-phos 100.0 5.6E-28 1.2E-32 214.4 21.1 210 65-329 5-216 (222)
10 COG0546 Gph Predicted phosphat 100.0 2.9E-27 6.2E-32 209.5 24.3 214 65-338 2-218 (220)
11 TIGR01422 phosphonatase phosph 100.0 1.3E-27 2.9E-32 216.1 21.8 191 67-310 2-205 (253)
12 PRK13478 phosphonoacetaldehyde 100.0 2.5E-27 5.4E-32 216.1 23.1 194 64-310 1-207 (267)
13 TIGR01449 PGP_bact 2-phosphogl 100.0 1.5E-27 3.1E-32 210.1 19.9 204 70-326 1-207 (213)
14 PRK11587 putative phosphatase; 100.0 2.1E-27 4.5E-32 210.2 20.2 204 65-330 1-205 (218)
15 PLN02940 riboflavin kinase 100.0 3.8E-27 8.2E-32 224.4 21.3 211 65-332 9-220 (382)
16 PRK13223 phosphoglycolate phos 100.0 1.5E-26 3.3E-31 211.1 21.8 217 65-338 11-230 (272)
17 TIGR01454 AHBA_synth_RP 3-amin 99.9 4.3E-26 9.4E-31 199.8 22.6 200 70-337 1-203 (205)
18 TIGR01990 bPGM beta-phosphoglu 99.9 3.4E-26 7.4E-31 196.9 19.9 182 69-305 1-184 (185)
19 TIGR02253 CTE7 HAD superfamily 99.9 1.9E-26 4.1E-31 204.2 18.7 192 66-311 1-200 (221)
20 PRK13222 phosphoglycolate phos 99.9 1.2E-25 2.6E-30 199.6 23.6 217 64-338 3-222 (226)
21 PRK10563 6-phosphogluconate ph 99.9 2.3E-26 5E-31 203.8 17.9 186 65-309 2-189 (221)
22 PRK13225 phosphoglycolate phos 99.9 4.7E-26 1E-30 207.4 19.9 210 65-341 60-271 (273)
23 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 8.7E-26 1.9E-30 194.4 20.2 184 67-305 1-185 (185)
24 PRK10725 fructose-1-P/6-phosph 99.9 9.8E-26 2.1E-30 194.7 20.0 184 64-306 2-186 (188)
25 TIGR01428 HAD_type_II 2-haloal 99.9 6.1E-26 1.3E-30 197.7 16.4 106 178-310 91-196 (198)
26 PLN02919 haloacid dehalogenase 99.9 8.7E-25 1.9E-29 230.8 26.8 219 63-336 71-293 (1057)
27 PRK09449 dUMP phosphatase; Pro 99.9 1.7E-25 3.7E-30 198.6 17.9 128 178-338 94-223 (224)
28 TIGR02252 DREG-2 REG-2-like, H 99.9 4E-25 8.7E-30 193.3 19.0 187 68-304 1-203 (203)
29 TIGR02254 YjjG/YfnB HAD superf 99.9 2E-25 4.3E-30 197.8 17.2 185 67-310 1-202 (224)
30 PRK10748 flavin mononucleotide 99.9 1.1E-24 2.3E-29 195.4 21.3 219 64-337 7-238 (238)
31 PRK14988 GMP/IMP nucleotidase; 99.9 1E-24 2.2E-29 193.6 20.2 132 176-341 90-222 (224)
32 PRK06698 bifunctional 5'-methy 99.9 1.4E-24 3E-29 212.4 21.3 216 64-339 238-455 (459)
33 PF13419 HAD_2: Haloacid dehal 99.9 3E-24 6.6E-29 181.9 16.7 174 70-305 1-176 (176)
34 PLN02811 hydrolase 99.9 1.5E-23 3.3E-28 185.7 20.4 204 74-332 1-210 (220)
35 COG1011 Predicted hydrolase (H 99.9 1.4E-23 3.1E-28 186.6 18.3 131 177-339 97-228 (229)
36 TIGR02247 HAD-1A3-hyp Epoxide 99.9 1.8E-23 3.9E-28 184.0 15.5 112 177-315 92-205 (211)
37 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 3.2E-22 7E-27 174.2 18.2 180 68-298 1-197 (197)
38 TIGR01993 Pyr-5-nucltdase pyri 99.9 1.3E-22 2.8E-27 174.7 15.3 99 177-305 82-184 (184)
39 KOG2914 Predicted haloacid-hal 99.9 1.6E-21 3.4E-26 170.1 21.6 212 63-329 6-219 (222)
40 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 9.9E-22 2.1E-26 168.5 18.9 100 178-305 84-183 (183)
41 PRK09456 ?-D-glucose-1-phospha 99.9 1.4E-21 3E-26 170.5 18.6 112 178-315 83-194 (199)
42 PHA02597 30.2 hypothetical pro 99.9 9.6E-22 2.1E-26 171.1 16.9 189 66-327 1-193 (197)
43 TIGR01549 HAD-SF-IA-v1 haloaci 99.9 1.1E-21 2.3E-26 164.0 16.4 154 69-299 1-154 (154)
44 KOG3085 Predicted hydrolase (H 99.9 1.8E-22 4E-27 176.5 10.5 207 64-315 4-222 (237)
45 TIGR00338 serB phosphoserine p 99.8 8.9E-20 1.9E-24 161.3 18.3 110 178-304 84-193 (219)
46 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 1E-20 2.2E-25 161.4 10.6 166 69-298 1-175 (175)
47 TIGR01656 Histidinol-ppas hist 99.8 5.6E-20 1.2E-24 152.5 11.5 106 178-308 26-147 (147)
48 TIGR01691 enolase-ppase 2,3-di 99.8 3.8E-19 8.2E-24 156.5 16.9 122 159-310 76-200 (220)
49 PRK08942 D,D-heptose 1,7-bisph 99.8 3.7E-19 7.9E-24 152.9 15.6 109 178-311 28-152 (181)
50 PLN02954 phosphoserine phospha 99.8 7.1E-19 1.5E-23 156.1 17.9 213 64-337 9-223 (224)
51 PRK06769 hypothetical protein; 99.8 3.2E-19 7E-24 152.0 14.6 107 178-311 27-142 (173)
52 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 5.6E-19 1.2E-23 153.8 15.4 114 178-308 79-192 (201)
53 TIGR00213 GmhB_yaeD D,D-heptos 99.8 2.9E-19 6.3E-24 152.8 12.9 125 178-327 25-173 (176)
54 PRK11133 serB phosphoserine ph 99.8 2.2E-18 4.8E-23 160.0 17.9 138 178-339 180-317 (322)
55 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 2.1E-18 4.6E-23 140.4 11.4 98 178-306 24-131 (132)
56 TIGR01685 MDP-1 magnesium-depe 99.8 1.2E-18 2.7E-23 147.3 9.3 108 177-311 43-162 (174)
57 TIGR01261 hisB_Nterm histidino 99.8 3.5E-18 7.6E-23 143.5 11.6 112 178-314 28-155 (161)
58 PRK09552 mtnX 2-hydroxy-3-keto 99.8 6.4E-18 1.4E-22 149.6 13.3 101 178-303 73-184 (219)
59 KOG3109 Haloacid dehalogenase- 99.8 1.6E-17 3.4E-22 140.7 14.3 189 65-309 13-208 (244)
60 TIGR01452 PGP_euk phosphoglyco 99.7 1.3E-17 2.8E-22 153.0 11.2 123 180-327 144-278 (279)
61 TIGR01672 AphA HAD superfamily 99.7 1.2E-16 2.5E-21 141.9 16.2 101 177-311 112-216 (237)
62 PRK13582 thrH phosphoserine ph 99.7 4.8E-16 1E-20 135.9 18.3 102 178-303 67-168 (205)
63 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 5.9E-17 1.3E-21 136.9 11.5 97 179-304 42-160 (166)
64 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.7 1.2E-16 2.5E-21 144.8 10.9 108 180-311 121-229 (257)
65 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.7 3E-16 6.6E-21 141.4 12.3 99 228-326 139-247 (249)
66 PRK10444 UMP phosphatase; Prov 99.7 4.2E-16 9.2E-21 140.1 13.1 226 67-328 1-245 (248)
67 TIGR02137 HSK-PSP phosphoserin 99.7 2.9E-15 6.3E-20 130.7 17.6 104 178-306 67-171 (203)
68 TIGR01668 YqeG_hyp_ppase HAD s 99.7 8.4E-16 1.8E-20 130.6 12.8 101 178-314 42-144 (170)
69 cd01427 HAD_like Haloacid deha 99.7 6.6E-16 1.4E-20 124.9 11.3 117 178-305 23-139 (139)
70 TIGR03333 salvage_mtnX 2-hydro 99.6 3.7E-15 7.9E-20 131.5 15.0 99 178-300 69-177 (214)
71 COG0560 SerB Phosphoserine pho 99.6 6.1E-15 1.3E-19 129.3 16.3 110 178-304 76-185 (212)
72 COG0647 NagD Predicted sugar p 99.6 2.3E-15 5E-20 135.2 13.2 244 63-338 4-266 (269)
73 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 1.7E-14 3.6E-19 125.9 15.9 112 178-305 86-197 (202)
74 TIGR01489 DKMTPPase-SF 2,3-dik 99.6 2.8E-14 6.2E-19 122.7 16.4 111 178-302 71-185 (188)
75 PRK05446 imidazole glycerol-ph 99.6 9.1E-15 2E-19 136.8 13.3 109 178-311 29-153 (354)
76 TIGR01488 HAD-SF-IB Haloacid D 99.6 3.7E-14 8E-19 120.9 14.3 106 177-298 71-177 (177)
77 PLN02645 phosphoglycolate phos 99.6 4E-14 8.8E-19 131.7 14.8 80 259-338 227-308 (311)
78 PHA02530 pseT polynucleotide k 99.6 1.7E-14 3.8E-19 133.6 11.9 104 178-308 186-298 (300)
79 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 1.5E-14 3.3E-19 116.9 9.5 88 179-297 29-126 (128)
80 COG2179 Predicted hydrolase of 99.6 2.5E-14 5.3E-19 116.8 10.5 93 179-307 46-139 (175)
81 TIGR01670 YrbI-phosphatas 3-de 99.6 2.4E-14 5.3E-19 119.6 10.6 115 187-342 36-150 (154)
82 PRK11009 aphA acid phosphatase 99.5 7.7E-14 1.7E-18 123.8 13.4 100 177-312 112-217 (237)
83 PF00702 Hydrolase: haloacid d 99.5 6.7E-14 1.4E-18 122.7 12.7 89 179-299 127-215 (215)
84 PRK10530 pyridoxal phosphate ( 99.5 1E-13 2.3E-18 126.4 13.7 228 66-340 2-270 (272)
85 TIGR02726 phenyl_P_delta pheny 99.5 1.5E-13 3.3E-18 116.0 12.3 112 187-337 42-154 (169)
86 PRK11590 hypothetical protein; 99.5 8.5E-13 1.8E-17 116.1 16.4 192 66-304 5-201 (211)
87 COG0241 HisB Histidinol phosph 99.5 4.5E-13 9.7E-18 113.0 13.0 112 178-311 30-154 (181)
88 PRK09484 3-deoxy-D-manno-octul 99.5 1.9E-13 4.1E-18 117.5 11.0 112 187-337 56-168 (183)
89 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.5 7.2E-14 1.6E-18 125.5 6.6 99 181-307 140-242 (242)
90 KOG2882 p-Nitrophenyl phosphat 99.5 8.1E-13 1.8E-17 117.9 12.7 88 252-339 214-305 (306)
91 KOG1615 Phosphoserine phosphat 99.4 2.5E-12 5.4E-17 107.3 12.4 133 175-328 84-221 (227)
92 TIGR01482 SPP-subfamily Sucros 99.4 3.2E-13 6.8E-18 119.8 7.1 69 256-327 142-210 (225)
93 PRK01158 phosphoglycolate phos 99.4 4.6E-13 1E-17 119.2 6.9 67 258-327 152-218 (230)
94 TIGR01460 HAD-SF-IIA Haloacid 99.4 2.8E-12 6E-17 114.8 11.3 50 259-308 185-236 (236)
95 TIGR01686 FkbH FkbH-like domai 99.4 2.4E-12 5.2E-17 120.3 11.2 91 179-301 31-125 (320)
96 TIGR01456 CECR5 HAD-superfamil 99.4 1.2E-11 2.6E-16 115.7 15.7 85 228-312 187-297 (321)
97 PF13242 Hydrolase_like: HAD-h 99.4 9.9E-13 2.1E-17 96.1 6.2 68 260-327 2-74 (75)
98 PF06888 Put_Phosphatase: Puta 99.4 2.7E-11 5.8E-16 107.1 16.2 156 177-341 69-234 (234)
99 PRK08238 hypothetical protein; 99.3 3.4E-11 7.4E-16 117.6 17.2 100 178-311 71-170 (479)
100 smart00577 CPDc catalytic doma 99.3 1.8E-12 3.9E-17 107.5 6.3 96 178-303 44-139 (148)
101 TIGR01663 PNK-3'Pase polynucle 99.3 6.2E-12 1.3E-16 123.3 10.7 94 179-301 197-306 (526)
102 PRK00192 mannosyl-3-phosphogly 99.3 1.6E-11 3.5E-16 112.3 12.5 54 258-312 186-240 (273)
103 PRK10513 sugar phosphate phosp 99.3 1.2E-10 2.6E-15 106.2 15.2 78 257-340 190-267 (270)
104 COG4229 Predicted enolase-phos 99.3 3.7E-10 8E-15 93.3 16.1 107 178-311 102-209 (229)
105 PTZ00445 p36-lilke protein; Pr 99.3 3.2E-11 6.9E-16 103.2 9.9 108 179-308 75-207 (219)
106 TIGR01544 HAD-SF-IE haloacid d 99.2 2E-10 4.3E-15 103.8 14.5 107 171-298 113-230 (277)
107 TIGR01487 SPP-like sucrose-pho 99.2 3.1E-11 6.8E-16 106.4 8.4 65 259-326 143-207 (215)
108 PF12689 Acid_PPase: Acid Phos 99.2 2.6E-11 5.6E-16 101.8 7.3 108 177-310 43-155 (169)
109 PLN02887 hydrolase family prot 99.2 4.9E-10 1.1E-14 111.5 16.8 78 257-340 501-578 (580)
110 PRK15126 thiamin pyrimidine py 99.2 3.3E-10 7.2E-15 103.5 14.5 78 258-341 183-262 (272)
111 KOG3120 Predicted haloacid deh 99.2 7.4E-10 1.6E-14 94.4 14.8 160 177-343 82-249 (256)
112 PRK10976 putative hydrolase; P 99.2 7.4E-10 1.6E-14 100.8 15.6 78 258-341 185-264 (266)
113 COG0561 Cof Predicted hydrolas 99.2 3.3E-10 7.1E-15 103.1 11.9 77 258-340 184-260 (264)
114 TIGR01545 YfhB_g-proteo haloac 99.1 3.9E-09 8.4E-14 92.7 17.9 107 178-304 93-200 (210)
115 TIGR02244 HAD-IG-Ncltidse HAD 99.1 1E-09 2.2E-14 102.2 14.3 122 177-307 182-324 (343)
116 PRK03669 mannosyl-3-phosphogly 99.1 2.7E-09 5.8E-14 97.5 16.1 82 258-343 182-270 (271)
117 PF09419 PGP_phosphatase: Mito 99.0 2.2E-09 4.8E-14 89.8 11.3 94 179-309 59-167 (168)
118 KOG3040 Predicted sugar phosph 99.0 3E-10 6.4E-15 95.9 5.9 55 258-312 177-232 (262)
119 PF08645 PNK3P: Polynucleotide 99.0 1.3E-09 2.7E-14 91.4 9.0 104 178-303 27-153 (159)
120 TIGR00099 Cof-subfamily Cof su 99.0 9.7E-09 2.1E-13 93.0 14.6 67 258-327 183-249 (256)
121 TIGR02463 MPGP_rel mannosyl-3- 99.0 6.5E-09 1.4E-13 91.9 11.7 43 261-303 177-219 (221)
122 TIGR01485 SPP_plant-cyano sucr 99.0 7.1E-09 1.5E-13 93.5 11.9 54 256-309 160-213 (249)
123 PF12710 HAD: haloacid dehalog 99.0 6.4E-09 1.4E-13 89.6 10.9 98 182-296 92-192 (192)
124 TIGR01533 lipo_e_P4 5'-nucleot 98.9 1.6E-08 3.5E-13 91.3 13.7 87 176-295 115-204 (266)
125 TIGR02471 sucr_syn_bact_C sucr 98.9 5.6E-09 1.2E-13 93.4 10.1 49 256-304 152-200 (236)
126 PF08282 Hydrolase_3: haloacid 98.9 1.4E-09 3.1E-14 97.2 6.1 66 259-327 182-247 (254)
127 COG1778 Low specificity phosph 98.9 1.1E-09 2.4E-14 88.6 3.5 82 187-304 43-124 (170)
128 TIGR01684 viral_ppase viral ph 98.9 5.8E-09 1.2E-13 94.1 7.8 49 179-230 145-194 (301)
129 COG4359 Uncharacterized conser 98.8 9.3E-08 2E-12 79.5 13.5 111 177-302 71-182 (220)
130 TIGR01484 HAD-SF-IIB HAD-super 98.8 3E-08 6.6E-13 86.5 9.3 46 258-303 158-203 (204)
131 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 2.2E-07 4.7E-12 84.1 13.4 50 258-307 171-222 (256)
132 TIGR01525 ATPase-IB_hvy heavy 98.7 1.1E-07 2.3E-12 95.7 10.5 106 178-324 383-489 (556)
133 PRK14502 bifunctional mannosyl 98.6 4.3E-07 9.3E-12 90.9 13.3 44 261-304 611-656 (694)
134 TIGR02461 osmo_MPG_phos mannos 98.6 4.2E-07 9.2E-12 80.7 11.3 41 263-303 181-223 (225)
135 PHA03398 viral phosphatase sup 98.6 2.7E-07 5.9E-12 83.5 8.8 102 179-292 147-266 (303)
136 TIGR01512 ATPase-IB2_Cd heavy 98.5 4.2E-07 9E-12 91.0 10.6 104 178-322 361-466 (536)
137 TIGR02251 HIF-SF_euk Dullard-l 98.5 5.6E-08 1.2E-12 81.8 3.3 98 178-306 41-139 (162)
138 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.5 5.2E-07 1.1E-11 81.0 9.7 92 177-300 22-116 (242)
139 TIGR01511 ATPase-IB1_Cu copper 98.5 9.3E-07 2E-11 88.9 10.7 104 178-323 404-507 (562)
140 PLN02382 probable sucrose-phos 98.4 4.1E-06 8.9E-11 80.9 13.3 47 258-304 170-220 (413)
141 TIGR00685 T6PP trehalose-phosp 98.4 3.8E-06 8.1E-11 75.6 11.1 68 264-340 168-242 (244)
142 KOG2630 Enolase-phosphatase E- 98.4 1.1E-05 2.5E-10 69.6 13.3 124 179-328 123-248 (254)
143 PF06941 NT5C: 5' nucleotidase 98.3 4.2E-06 9.2E-11 72.3 10.2 104 177-328 71-181 (191)
144 PF13344 Hydrolase_6: Haloacid 98.3 4.3E-06 9.3E-11 64.5 9.0 38 179-216 14-51 (101)
145 PRK10671 copA copper exporting 98.3 3.4E-06 7.3E-11 88.8 10.8 88 179-304 650-737 (834)
146 COG4087 Soluble P-type ATPase 98.3 4.2E-06 9.1E-11 65.9 8.3 110 178-324 29-138 (152)
147 TIGR01675 plant-AP plant acid 98.3 1.5E-05 3.2E-10 70.3 12.6 33 176-208 117-149 (229)
148 PF05116 S6PP: Sucrose-6F-phos 98.3 5.3E-06 1.2E-10 74.7 9.9 51 259-310 161-211 (247)
149 PF03767 Acid_phosphat_B: HAD 98.3 9E-07 2E-11 78.7 4.8 41 176-216 112-152 (229)
150 PRK12702 mannosyl-3-phosphogly 98.3 1.9E-05 4.2E-10 71.7 13.1 50 261-311 206-257 (302)
151 COG4996 Predicted phosphatase 98.2 7.1E-06 1.5E-10 64.5 8.6 80 177-290 39-127 (164)
152 TIGR01680 Veg_Stor_Prot vegeta 98.2 2.2E-05 4.7E-10 70.5 11.9 41 176-216 142-182 (275)
153 PRK10187 trehalose-6-phosphate 98.2 4.5E-05 9.7E-10 69.5 14.1 71 259-341 170-244 (266)
154 TIGR01522 ATPase-IIA2_Ca golgi 98.2 8.5E-06 1.8E-10 86.2 10.3 115 179-304 528-642 (884)
155 PRK11033 zntA zinc/cadmium/mer 98.1 8.1E-06 1.8E-10 84.7 9.0 86 179-304 568-653 (741)
156 PTZ00174 phosphomannomutase; P 98.1 2.4E-06 5.3E-11 76.9 4.5 47 256-306 181-231 (247)
157 PF11019 DUF2608: Protein of u 98.1 0.00021 4.6E-09 64.4 16.8 126 178-310 80-213 (252)
158 PLN02423 phosphomannomutase 98.0 1.9E-06 4E-11 77.6 2.0 50 258-312 184-237 (245)
159 smart00775 LNS2 LNS2 domain. T 98.0 4.9E-05 1.1E-09 63.5 10.0 108 179-302 27-142 (157)
160 TIGR01116 ATPase-IIA1_Ca sarco 97.9 7.1E-05 1.5E-09 79.6 10.1 133 179-324 537-672 (917)
161 PF05761 5_nucleotid: 5' nucle 97.8 0.00015 3.3E-09 70.3 9.7 122 178-308 182-326 (448)
162 TIGR01497 kdpB K+-transporting 97.7 0.00018 4E-09 73.2 9.6 88 179-304 446-533 (675)
163 PLN02177 glycerol-3-phosphate 97.7 0.002 4.2E-08 63.7 16.4 99 180-303 111-212 (497)
164 COG3700 AphA Acid phosphatase 97.6 0.00028 6.1E-09 58.7 8.3 100 180-309 115-214 (237)
165 PRK14501 putative bifunctional 97.6 0.0006 1.3E-08 70.9 12.6 69 260-341 654-724 (726)
166 COG2217 ZntA Cation transport 97.6 0.00039 8.5E-09 71.2 10.4 88 179-304 537-624 (713)
167 PRK01122 potassium-transportin 97.6 0.00037 8E-09 71.2 9.8 89 179-305 445-533 (679)
168 COG3882 FkbH Predicted enzyme 97.5 0.00074 1.6E-08 64.6 10.5 93 180-300 256-348 (574)
169 PRK14010 potassium-transportin 97.5 0.00083 1.8E-08 68.6 11.1 89 179-305 441-529 (673)
170 PF03031 NIF: NLI interacting 97.4 0.00011 2.4E-09 61.4 3.2 85 178-292 35-119 (159)
171 PRK10517 magnesium-transportin 97.4 0.00042 9.2E-09 73.4 8.2 113 179-304 550-662 (902)
172 TIGR01524 ATPase-IIIB_Mg magne 97.4 0.00058 1.3E-08 72.3 8.9 113 179-304 515-627 (867)
173 PLN02645 phosphoglycolate phos 97.4 0.0011 2.5E-08 61.7 9.6 91 179-304 44-136 (311)
174 TIGR01517 ATPase-IIB_Ca plasma 97.3 0.00062 1.4E-08 72.7 8.6 115 179-304 579-693 (941)
175 PRK15122 magnesium-transportin 97.3 0.00076 1.6E-08 71.6 8.5 113 179-304 550-662 (903)
176 TIGR01689 EcbF-BcbF capsule bi 97.3 0.0008 1.7E-08 53.8 6.6 31 179-209 24-54 (126)
177 TIGR01647 ATPase-IIIA_H plasma 97.3 0.0012 2.7E-08 68.8 9.5 117 179-304 442-559 (755)
178 PF05152 DUF705: Protein of un 97.3 0.0019 4.2E-08 58.0 9.2 104 180-292 143-260 (297)
179 PLN02205 alpha,alpha-trehalose 97.2 0.0049 1.1E-07 64.9 13.0 40 260-299 759-801 (854)
180 PF08235 LNS2: LNS2 (Lipin/Ned 97.2 0.0068 1.5E-07 50.3 11.1 104 179-302 27-142 (157)
181 COG5663 Uncharacterized conser 97.2 0.0061 1.3E-07 50.4 10.6 94 179-311 72-166 (194)
182 COG2503 Predicted secreted aci 97.2 0.0049 1.1E-07 54.1 10.4 89 176-296 119-210 (274)
183 TIGR02250 FCP1_euk FCP1-like p 97.1 0.0014 2.9E-08 54.7 6.4 79 178-290 57-138 (156)
184 PF06437 ISN1: IMP-specific 5' 97.1 0.0018 3.9E-08 60.4 7.6 55 66-121 146-206 (408)
185 TIGR01523 ATPase-IID_K-Na pota 97.1 0.002 4.3E-08 69.5 9.1 112 179-304 646-770 (1053)
186 COG5610 Predicted hydrolase (H 97.1 0.0025 5.5E-08 60.5 8.3 124 155-305 69-201 (635)
187 COG0474 MgtA Cation transport 96.8 0.004 8.7E-08 66.3 8.2 119 179-306 547-665 (917)
188 TIGR01106 ATPase-IIC_X-K sodiu 96.7 0.0054 1.2E-07 66.1 8.9 114 179-304 568-708 (997)
189 TIGR01658 EYA-cons_domain eyes 96.6 0.12 2.7E-06 45.6 14.4 48 264-311 215-262 (274)
190 KOG2470 Similar to IMP-GMP spe 96.6 0.0056 1.2E-07 56.3 6.3 116 178-305 239-374 (510)
191 KOG0207 Cation transport ATPas 96.5 0.0091 2E-07 61.5 8.3 88 179-304 723-810 (951)
192 COG3769 Predicted hydrolase (H 96.3 0.0054 1.2E-07 53.1 4.3 38 65-102 5-44 (274)
193 KOG3107 Predicted haloacid deh 96.3 0.5 1.1E-05 44.3 17.1 44 265-309 411-454 (468)
194 COG0647 NagD Predicted sugar p 96.2 0.085 1.8E-06 47.9 11.8 40 177-216 22-61 (269)
195 TIGR01494 ATPase_P-type ATPase 96.2 0.039 8.5E-07 54.9 10.4 85 179-304 347-431 (499)
196 COG4030 Uncharacterized protei 96.1 0.46 9.9E-06 41.6 15.2 42 176-219 80-121 (315)
197 KOG0202 Ca2+ transporting ATPa 96.1 0.027 5.8E-07 57.7 8.9 105 179-305 584-703 (972)
198 TIGR01652 ATPase-Plipid phosph 96.1 0.037 7.9E-07 60.2 10.3 38 179-216 631-668 (1057)
199 TIGR01657 P-ATPase-V P-type AT 96.0 0.027 5.9E-07 61.1 9.1 40 179-219 656-695 (1054)
200 TIGR01452 PGP_euk phosphoglyco 95.9 0.13 2.7E-06 47.2 11.9 89 179-303 18-108 (279)
201 PLN02151 trehalose-phosphatase 95.8 0.2 4.3E-06 47.3 12.8 70 262-341 268-345 (354)
202 PLN03190 aminophospholipid tra 95.8 0.059 1.3E-06 58.9 10.4 37 179-215 726-762 (1178)
203 TIGR02245 HAD_IIID1 HAD-superf 95.8 0.066 1.4E-06 46.3 8.7 38 178-216 44-81 (195)
204 PF05822 UMPH-1: Pyrimidine 5' 95.7 0.046 9.9E-07 48.7 7.5 115 169-298 80-198 (246)
205 KOG2961 Predicted hydrolase (H 95.4 0.13 2.9E-06 42.0 8.5 48 265-312 124-173 (190)
206 KOG2134 Polynucleotide kinase 94.6 0.079 1.7E-06 49.8 6.1 96 179-303 104-230 (422)
207 COG2216 KdpB High-affinity K+ 94.1 0.2 4.3E-06 48.9 7.8 88 180-305 448-535 (681)
208 PLN03017 trehalose-phosphatase 94.1 0.089 1.9E-06 49.8 5.2 70 263-341 283-359 (366)
209 KOG0206 P-type ATPase [General 93.7 0.33 7.2E-06 52.3 9.2 37 179-215 651-687 (1151)
210 KOG1618 Predicted phosphatase 93.7 0.26 5.7E-06 45.2 7.2 90 179-304 51-144 (389)
211 PRK10444 UMP phosphatase; Prov 93.6 0.48 1E-05 42.6 9.0 38 179-216 17-54 (248)
212 PLN02499 glycerol-3-phosphate 93.5 1.3 2.8E-05 43.6 12.2 33 187-220 101-133 (498)
213 PLN02580 trehalose-phosphatase 93.5 0.13 2.9E-06 49.0 5.4 36 178-214 140-175 (384)
214 COG1877 OtsB Trehalose-6-phosp 92.2 1.5 3.3E-05 39.8 10.0 46 264-309 183-231 (266)
215 KOG2469 IMP-GMP specific 5'-nu 91.2 0.39 8.5E-06 45.5 5.3 123 180-307 199-334 (424)
216 COG4502 5'(3')-deoxyribonucleo 90.9 0.31 6.8E-06 39.3 3.7 38 178-216 67-106 (180)
217 KOG3128 Uncharacterized conser 90.2 0.49 1.1E-05 42.1 4.6 107 177-298 136-247 (298)
218 TIGR01460 HAD-SF-IIA Haloacid 90.1 2.3 4.9E-05 37.8 9.2 38 179-216 14-51 (236)
219 KOG2882 p-Nitrophenyl phosphat 89.1 3.7 8.1E-05 37.6 9.5 38 179-216 38-75 (306)
220 PLN02580 trehalose-phosphatase 88.9 1.5 3.3E-05 41.9 7.3 71 261-341 299-377 (384)
221 KOG0210 P-type ATPase [Inorgan 88.7 1.3 2.9E-05 44.9 7.0 96 180-308 712-809 (1051)
222 KOG0204 Calcium transporting A 88.4 2.3 5.1E-05 44.2 8.5 98 179-306 647-765 (1034)
223 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.3 0.81 1.7E-05 41.3 4.9 37 179-215 21-57 (257)
224 PF05690 ThiG: Thiazole biosyn 87.4 6.4 0.00014 34.9 9.6 97 178-309 103-207 (247)
225 TIGR01457 HAD-SF-IIA-hyp2 HAD- 86.9 1.1 2.4E-05 40.2 5.0 38 179-216 17-57 (249)
226 KOG2116 Protein involved in pl 86.0 7.5 0.00016 39.4 10.3 137 182-343 561-710 (738)
227 PF06189 5-nucleotidase: 5'-nu 85.7 9.5 0.00021 34.3 10.0 77 195-310 186-262 (264)
228 CHL00162 thiG thiamin biosynth 85.6 11 0.00024 33.8 10.3 98 178-310 117-222 (267)
229 TIGR00099 Cof-subfamily Cof su 85.4 1.9 4.2E-05 38.6 5.8 38 179-216 16-53 (256)
230 PRK10513 sugar phosphate phosp 84.4 2.3 4.9E-05 38.4 5.8 40 179-219 20-59 (270)
231 PF02358 Trehalose_PPase: Treh 83.6 1 2.2E-05 40.0 3.0 38 264-301 166-206 (235)
232 PLN03064 alpha,alpha-trehalose 83.4 2.2 4.7E-05 45.6 5.7 38 178-215 621-659 (934)
233 PRK11840 bifunctional sulfur c 82.9 18 0.00039 33.8 10.8 101 177-310 176-282 (326)
234 KOG0209 P-type ATPase [Inorgan 81.2 3.9 8.4E-05 42.6 6.3 39 178-216 674-712 (1160)
235 PF08282 Hydrolase_3: haloacid 81.1 3.3 7.2E-05 36.2 5.4 53 178-236 14-66 (254)
236 cd04728 ThiG Thiazole synthase 80.4 29 0.00063 31.0 10.8 102 177-311 102-209 (248)
237 PRK10976 putative hydrolase; P 80.4 2.9 6.3E-05 37.6 4.9 38 179-216 19-56 (266)
238 PLN03063 alpha,alpha-trehalose 79.8 3.4 7.5E-05 43.7 5.7 38 178-215 531-569 (797)
239 TIGR02461 osmo_MPG_phos mannos 79.4 4.2 9.1E-05 35.9 5.4 53 180-238 16-68 (225)
240 PRK00192 mannosyl-3-phosphogly 78.9 3.2 6.9E-05 37.7 4.7 40 179-219 21-60 (273)
241 KOG1618 Predicted phosphatase 78.6 2.9 6.2E-05 38.7 4.0 53 259-311 268-345 (389)
242 COG0561 Cof Predicted hydrolas 78.5 3.9 8.4E-05 36.8 5.1 41 179-220 20-60 (264)
243 PRK15126 thiamin pyrimidine py 78.1 3.8 8.3E-05 37.0 4.9 38 179-216 19-56 (272)
244 PRK00208 thiG thiazole synthas 77.0 43 0.00094 30.0 10.9 101 178-311 103-209 (250)
245 TIGR01487 SPP-like sucrose-pho 76.5 4.4 9.5E-05 35.2 4.7 38 179-216 18-55 (215)
246 TIGR02463 MPGP_rel mannosyl-3- 74.2 5.4 0.00012 34.8 4.6 38 181-219 18-55 (221)
247 COG2022 ThiG Uncharacterized e 74.2 40 0.00087 29.9 9.7 98 178-310 110-215 (262)
248 PRK01158 phosphoglycolate phos 72.8 6.2 0.00014 34.5 4.7 38 179-216 20-57 (230)
249 TIGR01486 HAD-SF-IIB-MPGP mann 72.4 7.6 0.00016 34.8 5.2 35 182-216 19-53 (256)
250 COG0731 Fe-S oxidoreductases [ 70.1 8.1 0.00017 35.6 4.8 38 176-213 89-127 (296)
251 TIGR01456 CECR5 HAD-superfamil 70.1 17 0.00037 33.9 7.2 29 179-207 16-48 (321)
252 TIGR01482 SPP-subfamily Sucros 69.3 8.2 0.00018 33.5 4.7 38 179-216 15-52 (225)
253 PTZ00174 phosphomannomutase; P 69.0 8.7 0.00019 34.3 4.8 36 179-214 22-57 (247)
254 PRK10530 pyridoxal phosphate ( 68.9 8.3 0.00018 34.6 4.8 38 179-216 20-57 (272)
255 TIGR02468 sucrsPsyn_pln sucros 68.1 14 0.00031 40.0 6.8 52 256-307 949-1002(1050)
256 KOG0323 TFIIF-interacting CTD 66.1 9.6 0.00021 38.8 4.8 51 178-230 200-250 (635)
257 TIGR01361 DAHP_synth_Bsub phos 66.0 1E+02 0.0022 27.8 12.7 126 185-341 122-258 (260)
258 PRK03669 mannosyl-3-phosphogly 65.9 10 0.00022 34.3 4.7 39 180-219 25-63 (271)
259 COG4850 Uncharacterized conser 64.9 38 0.00082 31.6 7.9 34 177-210 194-228 (373)
260 KOG3189 Phosphomannomutase [Li 64.6 4.7 0.0001 34.7 2.0 29 67-95 11-39 (252)
261 PRK13762 tRNA-modifying enzyme 64.3 20 0.00043 33.6 6.4 32 176-207 139-170 (322)
262 PRK12702 mannosyl-3-phosphogly 62.4 14 0.0003 34.1 4.8 54 180-239 19-72 (302)
263 PRK13398 3-deoxy-7-phosphohept 61.2 1.3E+02 0.0028 27.3 12.9 48 289-342 214-261 (266)
264 COG5083 SMP2 Uncharacterized p 61.0 5.5 0.00012 38.4 2.0 18 65-82 373-390 (580)
265 cd00733 GlyRS_alpha_core Class 60.9 9.1 0.0002 34.1 3.2 46 261-307 80-132 (279)
266 TIGR03586 PseI pseudaminic aci 60.8 53 0.0011 30.8 8.5 126 185-342 124-252 (327)
267 KOG3040 Predicted sugar phosph 60.2 19 0.00042 31.4 4.9 38 179-216 23-60 (262)
268 KOG4549 Magnesium-dependent ph 59.6 48 0.001 26.5 6.6 39 178-216 43-82 (144)
269 TIGR03470 HpnH hopanoid biosyn 59.6 1.5E+02 0.0033 27.6 12.1 32 176-207 81-112 (318)
270 PRK09348 glyQ glycyl-tRNA synt 59.2 9.9 0.00022 33.9 3.1 46 261-307 84-136 (283)
271 PHA02575 1 deoxynucleoside mon 59.1 64 0.0014 28.6 8.1 63 278-342 154-226 (227)
272 PRK07709 fructose-bisphosphate 58.9 1.1E+02 0.0025 28.0 10.1 105 183-310 5-111 (285)
273 smart00577 CPDc catalytic doma 58.8 5.7 0.00012 32.5 1.5 15 68-82 3-17 (148)
274 PRK08610 fructose-bisphosphate 58.7 1.5E+02 0.0033 27.3 11.0 101 183-310 5-111 (286)
275 PRK13397 3-deoxy-7-phosphohept 58.5 1.4E+02 0.003 26.9 11.2 130 185-342 112-249 (250)
276 TIGR00388 glyQ glycyl-tRNA syn 58.1 11 0.00024 33.9 3.2 46 261-307 81-133 (293)
277 TIGR02329 propionate_PrpR prop 57.9 63 0.0014 32.5 9.0 34 270-308 139-172 (526)
278 PF06506 PrpR_N: Propionate ca 57.7 16 0.00036 30.7 4.2 40 266-310 112-154 (176)
279 TIGR02251 HIF-SF_euk Dullard-l 56.8 6.1 0.00013 32.9 1.4 15 68-82 2-16 (162)
280 PF03102 NeuB: NeuB family; I 56.1 19 0.0004 32.3 4.4 126 184-342 102-231 (241)
281 COG2089 SpsE Sialic acid synth 55.7 55 0.0012 30.5 7.4 124 185-341 137-264 (347)
282 PRK08185 hypothetical protein; 55.6 74 0.0016 29.2 8.3 99 185-310 2-102 (283)
283 TIGR03569 NeuB_NnaB N-acetylne 55.2 63 0.0014 30.4 8.0 125 185-342 123-253 (329)
284 TIGR01858 tag_bisphos_ald clas 54.3 1.6E+02 0.0035 27.0 10.3 98 184-310 4-106 (282)
285 KOG0207 Cation transport ATPas 53.0 2.6E+02 0.0057 30.0 12.5 29 176-204 683-711 (951)
286 PRK15424 propionate catabolism 51.8 85 0.0018 31.7 8.7 35 269-308 148-182 (538)
287 TIGR00715 precor6x_red precorr 50.7 1.9E+02 0.0041 26.1 11.7 29 178-206 109-140 (256)
288 COG0191 Fba Fructose/tagatose 50.0 86 0.0019 28.8 7.6 103 183-310 5-109 (286)
289 KOG0203 Na+/K+ ATPase, alpha s 49.9 7.5 0.00016 40.6 1.0 38 179-216 590-627 (1019)
290 PRK12595 bifunctional 3-deoxy- 48.2 2.5E+02 0.0055 26.7 12.4 126 185-341 215-351 (360)
291 PRK07084 fructose-bisphosphate 48.1 1.2E+02 0.0027 28.3 8.6 102 182-310 10-119 (321)
292 TIGR00262 trpA tryptophan synt 47.8 1.7E+02 0.0036 26.4 9.3 102 179-309 124-230 (256)
293 PF12522 UL73_N: Cytomegalovir 46.5 11 0.00024 20.9 0.9 21 6-26 5-25 (27)
294 TIGR01485 SPP_plant-cyano sucr 46.5 30 0.00064 30.8 4.3 35 182-216 24-58 (249)
295 TIGR02250 FCP1_euk FCP1-like p 46.5 13 0.00028 30.9 1.7 17 66-82 5-21 (156)
296 PF02350 Epimerase_2: UDP-N-ac 46.2 1.9E+02 0.0042 27.2 9.9 65 266-341 250-316 (346)
297 PLN02951 Molybderin biosynthes 45.5 1.3E+02 0.0029 28.7 8.7 31 176-206 115-147 (373)
298 PRK14502 bifunctional mannosyl 45.3 38 0.00082 35.1 5.1 56 180-241 434-489 (694)
299 PRK12737 gatY tagatose-bisphos 44.5 2.5E+02 0.0055 25.7 10.4 99 183-310 5-108 (284)
300 PRK00994 F420-dependent methyl 44.0 2.4E+02 0.0052 25.3 11.3 44 261-307 72-117 (277)
301 PLN02887 hydrolase family prot 43.7 35 0.00076 34.7 4.7 40 179-219 325-364 (580)
302 COG0752 GlyQ Glycyl-tRNA synth 43.1 24 0.00051 31.4 2.9 46 261-307 85-137 (298)
303 PRK10187 trehalose-6-phosphate 43.0 30 0.00064 31.3 3.7 37 179-215 36-73 (266)
304 PF06014 DUF910: Bacterial pro 42.6 17 0.00036 25.1 1.5 24 269-296 8-31 (62)
305 cd00947 TBP_aldolase_IIB Tagat 42.2 2.4E+02 0.0052 25.8 9.4 97 185-310 2-103 (276)
306 PRK05835 fructose-bisphosphate 41.6 2.6E+02 0.0057 26.0 9.7 98 183-309 4-107 (307)
307 TIGR00167 cbbA ketose-bisphosp 41.3 2.9E+02 0.0063 25.4 11.4 105 183-310 5-111 (288)
308 PRK12738 kbaY tagatose-bisphos 41.0 2.9E+02 0.0063 25.4 9.9 101 184-310 6-108 (286)
309 PF03332 PMM: Eukaryotic phosp 40.6 45 0.00099 29.3 4.3 29 184-213 1-29 (220)
310 PF02358 Trehalose_PPase: Treh 40.5 40 0.00086 29.7 4.1 12 71-82 1-12 (235)
311 PRK15317 alkyl hydroperoxide r 39.7 3.8E+02 0.0081 26.7 11.4 29 279-307 211-242 (517)
312 PRK06806 fructose-bisphosphate 39.7 3E+02 0.0065 25.2 10.9 99 183-310 5-108 (281)
313 PF13580 SIS_2: SIS domain; PD 39.2 2E+02 0.0043 22.9 9.3 110 179-306 19-137 (138)
314 COG0761 lytB 4-Hydroxy-3-methy 39.2 1.2E+02 0.0027 27.8 6.9 47 265-315 227-273 (294)
315 PRK07315 fructose-bisphosphate 38.3 2.1E+02 0.0045 26.4 8.5 102 183-311 5-111 (293)
316 TIGR03365 Bsubt_queE 7-cyano-7 37.6 31 0.00068 30.6 2.9 31 177-207 82-112 (238)
317 KOG0208 Cation transport ATPas 37.4 1.1E+02 0.0023 33.1 7.0 38 179-216 705-742 (1140)
318 PF04413 Glycos_transf_N: 3-De 36.6 2.7E+02 0.0058 23.7 8.8 89 184-310 37-129 (186)
319 PTZ00317 NADP-dependent malic 36.3 3.5E+02 0.0075 27.5 10.1 37 179-216 105-144 (559)
320 cd01445 TST_Repeats Thiosulfat 35.4 1.3E+02 0.0028 24.1 6.0 51 260-310 75-133 (138)
321 PLN03017 trehalose-phosphatase 35.2 1.5E+02 0.0033 28.2 7.2 30 67-96 111-145 (366)
322 TIGR02826 RNR_activ_nrdG3 anae 35.0 84 0.0018 25.7 4.9 28 180-207 73-100 (147)
323 PF06189 5-nucleotidase: 5'-nu 34.5 2.8E+02 0.0061 25.1 8.3 77 195-309 36-112 (264)
324 PRK12857 fructose-1,6-bisphosp 34.4 3.7E+02 0.008 24.7 9.6 99 183-310 5-108 (284)
325 COG2896 MoaA Molybdenum cofact 34.4 1E+02 0.0023 28.8 5.9 32 175-206 67-99 (322)
326 PRK13125 trpA tryptophan synth 34.0 3.4E+02 0.0073 24.1 9.8 25 182-206 116-140 (244)
327 PF01116 F_bP_aldolase: Fructo 33.9 62 0.0014 29.8 4.3 101 184-310 5-107 (287)
328 TIGR01290 nifB nitrogenase cof 33.7 1.3E+02 0.0028 29.6 6.7 28 179-206 91-121 (442)
329 PRK13361 molybdenum cofactor b 33.5 1.7E+02 0.0037 27.2 7.4 31 176-206 70-102 (329)
330 PRK09195 gatY tagatose-bisphos 33.5 3.8E+02 0.0083 24.6 9.7 101 184-310 6-108 (284)
331 KOG0024 Sorbitol dehydrogenase 32.4 1.3E+02 0.0029 28.2 6.1 76 266-341 156-238 (354)
332 PRK11070 ssDNA exonuclease Rec 31.7 5.6E+02 0.012 26.2 11.1 111 179-317 50-168 (575)
333 PRK10017 colanic acid biosynth 31.6 5E+02 0.011 25.3 11.8 59 283-341 330-390 (426)
334 COG2241 CobL Precorrin-6B meth 31.5 3.6E+02 0.0077 23.6 9.0 49 261-309 99-150 (210)
335 PRK06552 keto-hydroxyglutarate 31.0 3.6E+02 0.0078 23.5 10.9 84 186-304 5-93 (213)
336 PF02091 tRNA-synt_2e: Glycyl- 30.6 13 0.00029 33.3 -0.6 46 261-307 79-131 (284)
337 KOG2469 IMP-GMP specific 5'-nu 30.6 37 0.0008 32.6 2.2 20 63-82 23-42 (424)
338 PF05761 5_nucleotid: 5' nucle 30.5 60 0.0013 31.9 3.8 38 64-101 9-52 (448)
339 PRK10076 pyruvate formate lyas 30.5 53 0.0011 28.7 3.1 30 178-207 49-79 (213)
340 PF04413 Glycos_transf_N: 3-De 30.4 48 0.001 28.2 2.8 74 186-292 109-184 (186)
341 KOG0780 Signal recognition par 30.3 3.4E+02 0.0073 26.4 8.4 42 256-297 190-232 (483)
342 PF06925 MGDG_synth: Monogalac 30.1 2.3E+02 0.0049 23.4 6.9 25 261-286 142-166 (169)
343 COG2897 SseA Rhodanese-related 30.0 93 0.002 28.6 4.7 53 259-311 69-127 (285)
344 TIGR01521 FruBisAldo_II_B fruc 29.9 4.9E+02 0.011 24.7 9.6 97 184-309 4-106 (347)
345 cd05008 SIS_GlmS_GlmD_1 SIS (S 29.9 74 0.0016 24.6 3.7 28 180-207 58-85 (126)
346 PRK09196 fructose-1,6-bisphosp 29.6 4.9E+02 0.011 24.7 10.3 99 183-310 5-109 (347)
347 PRK13789 phosphoribosylamine-- 29.5 2.5E+02 0.0053 27.4 7.9 56 74-141 69-124 (426)
348 TIGR00236 wecB UDP-N-acetylglu 29.3 2.8E+02 0.006 25.9 8.2 32 278-309 86-120 (365)
349 cd06537 CIDE_N_B CIDE_N domain 29.2 39 0.00084 24.7 1.7 18 67-84 39-56 (81)
350 cd06539 CIDE_N_A CIDE_N domain 29.1 39 0.00086 24.5 1.7 18 67-84 40-57 (78)
351 PRK08649 inosine 5-monophospha 28.9 4.9E+02 0.011 24.9 9.6 43 263-309 174-218 (368)
352 KOG0205 Plasma membrane H+-tra 28.8 1.5E+02 0.0033 30.6 6.2 106 180-303 493-608 (942)
353 COG2099 CobK Precorrin-6x redu 28.8 4.4E+02 0.0095 23.8 8.6 31 176-206 109-139 (257)
354 COG1168 MalY Bifunctional PLP- 28.6 2E+02 0.0043 27.6 6.7 127 158-294 66-205 (388)
355 PF14336 DUF4392: Domain of un 28.6 3.2E+02 0.0068 25.2 8.0 26 181-206 62-87 (291)
356 PLN02591 tryptophan synthase 28.5 4.4E+02 0.0095 23.7 9.5 29 280-308 189-220 (250)
357 TIGR03151 enACPred_II putative 28.4 4E+02 0.0087 24.7 8.8 42 263-307 148-191 (307)
358 PRK07998 gatY putative fructos 28.1 4.7E+02 0.01 24.0 9.8 99 183-310 5-108 (283)
359 cd05014 SIS_Kpsf KpsF-like pro 28.1 70 0.0015 24.8 3.3 29 179-207 58-86 (128)
360 PRK14021 bifunctional shikimat 28.0 5E+02 0.011 26.2 10.0 35 273-307 263-303 (542)
361 smart00266 CAD Domains present 27.8 43 0.00093 24.0 1.7 18 67-84 38-55 (74)
362 COG3769 Predicted hydrolase (H 27.8 86 0.0019 27.7 3.8 37 183-220 27-63 (274)
363 PF04123 DUF373: Domain of unk 27.8 2.3E+02 0.0051 26.8 7.1 26 268-295 90-115 (344)
364 TIGR03278 methan_mark_10 putat 27.7 5.7E+02 0.012 24.8 12.5 29 177-205 84-113 (404)
365 smart00540 LEM in nuclear memb 27.6 64 0.0014 20.6 2.3 32 185-216 9-40 (44)
366 KOG0210 P-type ATPase [Inorgan 27.5 2.4E+02 0.0051 29.6 7.3 36 179-214 658-693 (1051)
367 TIGR02193 heptsyl_trn_I lipopo 27.2 4.8E+02 0.01 23.8 12.3 58 283-340 257-318 (319)
368 TIGR02495 NrdG2 anaerobic ribo 27.2 1.3E+02 0.0028 25.2 5.0 30 177-206 72-101 (191)
369 PRK14908 glycyl-tRNA synthetas 27.0 58 0.0013 35.3 3.2 46 261-307 85-137 (1000)
370 COG4850 Uncharacterized conser 26.9 5.4E+02 0.012 24.3 10.4 14 69-82 163-176 (373)
371 PRK08005 epimerase; Validated 26.7 4.3E+02 0.0093 23.0 10.2 95 182-306 93-191 (210)
372 KOG1605 TFIIF-interacting CTD 26.6 35 0.00077 30.9 1.4 95 178-302 130-224 (262)
373 COG0602 NrdG Organic radical a 25.9 40 0.00086 29.5 1.5 31 177-207 81-111 (212)
374 COG4087 Soluble P-type ATPase 25.4 3.6E+02 0.0078 21.9 6.6 53 266-318 57-112 (152)
375 cd05710 SIS_1 A subgroup of th 25.3 99 0.0021 24.0 3.6 28 180-207 59-86 (120)
376 cd00381 IMPDH IMPDH: The catal 25.3 5E+02 0.011 24.2 8.9 47 259-307 177-227 (325)
377 PF10113 Fibrillarin_2: Fibril 24.9 85 0.0018 30.4 3.5 46 264-309 207-256 (505)
378 TIGR01615 A_thal_3542 uncharac 24.5 2.5E+02 0.0055 22.5 5.7 84 186-289 3-86 (131)
379 cd06533 Glyco_transf_WecG_TagA 24.3 3.7E+02 0.008 22.4 7.1 31 185-216 36-66 (171)
380 PF01380 SIS: SIS domain SIS d 24.1 1.2E+02 0.0026 23.3 4.0 28 180-207 65-92 (131)
381 COG1911 RPL30 Ribosomal protei 24.0 1.5E+02 0.0033 22.4 4.0 43 179-221 19-61 (100)
382 cd01766 Ufm1 Urm1-like ubiquit 23.8 1.3E+02 0.0028 21.5 3.4 45 258-302 22-66 (82)
383 COG1180 PflA Pyruvate-formate 23.7 85 0.0018 28.4 3.3 28 180-207 97-124 (260)
384 PRK11145 pflA pyruvate formate 23.5 91 0.002 27.6 3.5 30 177-206 80-110 (246)
385 cd01615 CIDE_N CIDE_N domain, 23.5 57 0.0012 23.7 1.7 18 67-84 40-57 (78)
386 cd02071 MM_CoA_mut_B12_BD meth 23.4 3.5E+02 0.0077 20.9 9.0 43 261-304 63-107 (122)
387 KOG4584 Uncharacterized conser 23.2 3.2E+02 0.0069 25.4 6.7 122 177-339 117-255 (348)
388 KOG0391 SNF2 family DNA-depend 23.2 1.9E+02 0.0041 32.3 5.9 92 186-311 1267-1358(1958)
389 PRK04940 hypothetical protein; 23.1 1.9E+02 0.0042 24.6 5.1 57 280-336 60-119 (180)
390 TIGR00221 nagA N-acetylglucosa 23.0 5E+02 0.011 24.9 8.6 37 179-215 174-211 (380)
391 TIGR02471 sucr_syn_bact_C sucr 23.0 1.2E+02 0.0026 26.5 4.1 43 186-233 22-64 (236)
392 PRK13529 malate dehydrogenase; 23.0 8.2E+02 0.018 24.9 10.8 22 262-283 169-191 (563)
393 PRK13790 phosphoribosylamine-- 23.0 2.7E+02 0.0059 26.5 6.8 57 73-141 27-83 (379)
394 PF01321 Creatinase_N: Creatin 22.7 3.3E+02 0.0071 20.7 6.3 22 185-206 3-24 (132)
395 PF13382 Adenine_deam_C: Adeni 22.6 2.9E+02 0.0063 23.3 6.1 36 274-309 60-99 (171)
396 cd06536 CIDE_N_ICAD CIDE_N dom 22.3 61 0.0013 23.6 1.7 18 67-84 42-59 (80)
397 PRK05752 uroporphyrinogen-III 22.2 3.4E+02 0.0073 24.1 6.9 21 180-200 11-31 (255)
398 PRK00286 xseA exodeoxyribonucl 22.0 6.9E+02 0.015 24.3 9.6 70 196-292 136-208 (438)
399 COG2237 Predicted membrane pro 22.0 1.5E+02 0.0033 28.0 4.6 18 277-294 97-114 (364)
400 TIGR02109 PQQ_syn_pqqE coenzym 21.9 1.1E+02 0.0023 28.8 3.8 31 176-206 62-92 (358)
401 TIGR03140 AhpF alkyl hydropero 21.7 8E+02 0.017 24.4 11.2 30 277-306 210-242 (515)
402 COG0378 HypB Ni2+-binding GTPa 21.7 5.4E+02 0.012 22.4 7.6 73 185-289 31-106 (202)
403 PRK10964 ADP-heptose:LPS hepto 21.5 6.3E+02 0.014 23.1 10.8 59 283-341 256-320 (322)
404 PRK06801 hypothetical protein; 21.5 6.4E+02 0.014 23.1 10.3 99 183-310 5-108 (286)
405 PRK09140 2-dehydro-3-deoxy-6-p 21.4 5.4E+02 0.012 22.2 9.4 15 291-305 75-89 (206)
406 COG1533 SplB DNA repair photol 21.2 5.3E+02 0.011 23.8 8.0 23 184-206 105-127 (297)
407 COG0541 Ffh Signal recognition 21.2 5.6E+02 0.012 25.2 8.3 99 179-306 138-247 (451)
408 PLN02151 trehalose-phosphatase 21.0 1.3E+02 0.0028 28.6 4.0 36 178-214 119-154 (354)
409 PF03808 Glyco_tran_WecB: Glyc 20.9 4.5E+02 0.0097 21.8 7.0 75 184-289 37-111 (172)
410 TIGR03127 RuMP_HxlB 6-phospho 20.7 1.3E+02 0.0027 25.1 3.6 28 180-207 84-111 (179)
411 PRK07114 keto-hydroxyglutarate 20.6 5.9E+02 0.013 22.4 10.6 118 185-338 6-130 (222)
412 cd06538 CIDE_N_FSP27 CIDE_N do 20.5 71 0.0015 23.2 1.7 18 67-84 39-56 (79)
413 COG4018 Uncharacterized protei 20.4 85 0.0018 29.4 2.5 44 265-308 208-255 (505)
414 COG1126 GlnQ ABC-type polar am 20.3 2.8E+02 0.006 24.7 5.6 35 180-215 171-205 (240)
No 1
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=100.00 E-value=5.9e-33 Score=254.89 Aligned_cols=242 Identities=53% Similarity=0.923 Sum_probs=186.5
Q ss_pred CCCCccEEEEecCccccccc-hhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCc
Q 019226 63 SSQSLQALIFDCDGVIIESE-HLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSS 141 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 141 (344)
....+++|||||||||+|+. ..+.++|.+++.++|++.. .|..+.+..+.. +|.+...+.+++...+++..
T Consensus 36 ~~~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~-------~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 107 (286)
T PLN02779 36 ASALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPV-------EWDVELYDELLN-IGGGKERMTWYFNENGWPTS 107 (286)
T ss_pred cccCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCC-------CCCHHHHHHHHc-cCCChHHHHHHHHHcCCCcc
Confidence 34568999999999999999 9999999999999998421 133444444444 67666666666666666533
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
+. ...+..++..++..+.+.+.+.+.|...+....+.++||+.++|+.|+++|++++|+||+....+...++.+.+...
T Consensus 108 ~~-~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~ 186 (286)
T PLN02779 108 TI-EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPER 186 (286)
T ss_pred cc-ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccc
Confidence 22 11222233334445556666666777665544568999999999999999999999999999888888877532233
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
+..++.+ . +++++..||+|++|..+++++|++|++|+||||+.+|+++|+++||.
T Consensus 187 ~~~~~~v-~------------------------~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~ 241 (286)
T PLN02779 187 AQGLDVF-A------------------------GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMR 241 (286)
T ss_pred cCceEEE-e------------------------ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCE
Confidence 3223444 5 78888899999999999999999999999999999999999999999
Q ss_pred EEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 302 CVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 302 ~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
+|++.++....+.+..++++++++.++...++..++-
T Consensus 242 ~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~~~~~~~ 278 (286)
T PLN02779 242 CIVTKSSYTADEDFSGADAVFDCLGDVPLEDFDLLFC 278 (286)
T ss_pred EEEEccCCccccccCCCcEEECChhhcchhhhHHHHH
Confidence 9999888776666777899999999999999987754
No 2
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.97 E-value=6.2e-29 Score=224.86 Aligned_cols=216 Identities=24% Similarity=0.365 Sum_probs=163.0
Q ss_pred CCCccEEEEecCccccccc-hhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESE-HLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (344)
...+|+|||||||||+|+. ..+.++|.+++.++|++... .+.++...|.........+. ++.
T Consensus 21 ~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~------------~e~~~~~~G~~~~~~~~~l~--~~~--- 83 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPP------------AFLLKRAEGMKNEQAISEVL--CWS--- 83 (260)
T ss_pred cCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCH------------HHHHHHhcCCCHHHHHHHHh--ccC---
Confidence 3579999999999999996 56778999999999987543 12234455665554333221 111
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
...+ ....+...+...+... ......++||+.++|+.|+++|++++|+||+....++..++++ ++..+
T Consensus 84 ------~~~~----~~~~l~~~~~~~~~~~-~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~-gl~~~ 151 (260)
T PLN03243 84 ------RDFL----QMKRLAIRKEDLYEYM-QGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV-GMEGF 151 (260)
T ss_pred ------CCHH----HHHHHHHHHHHHHHHH-HccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc-CCHhh
Confidence 0111 1233333344444322 2245689999999999999999999999999999999999997 77777
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ ++++..+||+|++|..+++++|+++++|+||||+..|+++|+++||.+
T Consensus 152 --Fd~ii~------------------------~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 152 --FSVVLA------------------------AEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred --CcEEEe------------------------cccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEE
Confidence 788988 899988999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 303 VITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 303 v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
|++. +......+..+++++.++.++....+..
T Consensus 206 i~v~-g~~~~~~l~~ad~vi~~~~el~~~~~~~ 237 (260)
T PLN03243 206 VAVA-GKHPVYELSAGDLVVRRLDDLSVVDLKN 237 (260)
T ss_pred EEEe-cCCchhhhccCCEEeCCHHHHHHHHHhh
Confidence 9997 4444455556777777777765544443
No 3
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.97 E-value=1.5e-28 Score=230.25 Aligned_cols=218 Identities=22% Similarity=0.291 Sum_probs=170.7
Q ss_pred CCccEEEEecCccccccch-hHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (344)
..+++|||||||||+|+.. .+.++|.+++.++|++... ...++...|.+.......+.....
T Consensus 129 ~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~------------~e~~~~~~G~~~~~~l~~ll~~~~----- 191 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPP------------AFILRRVEGMKNEQAISEVLCWSR----- 191 (381)
T ss_pred CCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCH------------HHHHHHhcCCCHHHHHHHHhhccC-----
Confidence 4689999999999999986 6667999999999987543 223455566665554332211110
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
++. ..+.+.+.+.+.|.+... ....++||+.++|+.|+++|++++|+||.....++..++.+ ++..+
T Consensus 192 ------~~~----~~e~l~~~~~~~y~~~~~-~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l-gL~~y- 258 (381)
T PLN02575 192 ------DPA----ELRRMATRKEEIYQALQG-GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI-GIRGF- 258 (381)
T ss_pred ------CHH----HHHHHHHHHHHHHHHHhc-cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCHHH-
Confidence 111 133444555666655543 34689999999999999999999999999999999999997 88887
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ ++++...||+|++|..+++++|+.|++|+||||+..|+++|+++||.+|
T Consensus 259 -Fd~Iv~------------------------sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~I 313 (381)
T PLN02575 259 -FSVIVA------------------------AEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV 313 (381)
T ss_pred -ceEEEe------------------------cCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 799988 8998889999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 304 ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 304 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
++.++.. ...+..+++++.++.++.+..|..+..
T Consensus 314 gV~~~~~-~~~l~~Ad~iI~s~~EL~~~~l~~l~~ 347 (381)
T PLN02575 314 AVASKHP-IYELGAADLVVRRLDELSIVDLKNLAD 347 (381)
T ss_pred EECCCCC-hhHhcCCCEEECCHHHHHHHHHhhhhh
Confidence 9987543 334556788899999888777766554
No 4
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.97 E-value=9.1e-29 Score=223.02 Aligned_cols=215 Identities=24% Similarity=0.364 Sum_probs=159.1
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (344)
..++|+|+|||||||+|+...+.++|.+++.++|..... .+..+. ..+...|.+..... .... +
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~------~~~~~~--~~~~~~G~~~~~~~---~~~~-~---- 82 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGV------PITEEF--FVENIAGKHNEDIA---LGLF-P---- 82 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCC------CCCHHH--HHHHcCCCCHHHHH---HHHc-C----
Confidence 456899999999999999999999999999999754110 011111 12233444433322 2110 0
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
. ..+. ...+...+...|..... ....++||+.++|+.|+++|++++|+||+....++..++++ ++..+
T Consensus 83 --~---~~~~----~~~~~~~~~~~y~~~~~-~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~-gl~~~- 150 (248)
T PLN02770 83 --D---DLER----GLKFTDDKEALFRKLAS-EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL-GLSDF- 150 (248)
T ss_pred --c---chhh----HHHHHHHHHHHHHHHHH-hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CChhh-
Confidence 0 0001 11122233444444432 34789999999999999999999999999999999999997 78777
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ ++++..+||+|++|..+++++|++|++|+||||+..|+++|+++|+.+|
T Consensus 151 -Fd~iv~------------------------~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 151 -FQAVII------------------------GSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred -CcEEEe------------------------cCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 788888 9999899999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhc-cccccccCCccccCHH
Q 019226 304 ITYTSSTAEQDF-KDAIAIYPDLSNVRLK 331 (344)
Q Consensus 304 ~v~~~~~~~~~l-~~~~~~~~~~~~~~~~ 331 (344)
++.++....... ..+++++.++.++++.
T Consensus 206 ~v~~g~~~~~l~~~~a~~vi~~~~e~~~~ 234 (248)
T PLN02770 206 GLTTRNPESLLMEAKPTFLIKDYEDPKLW 234 (248)
T ss_pred EEeCCCCHHHHhhcCCCEEeccchhhHHH
Confidence 998875432222 3578889998885543
No 5
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.96 E-value=4.5e-28 Score=214.59 Aligned_cols=204 Identities=19% Similarity=0.288 Sum_probs=155.4
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHH-hhCCChhhH-HHHHHHcCCCCcccc
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-QIGGGKPKM-RWYFKEHGWPSSTIF 144 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~g~~~~~~~ 144 (344)
+|+|+||+||||+|+.+.+.++|.++++++|.+.+. .++.. ..|.....+ ..++...|.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~~----- 62 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTP-------------EEVQSAWMGQSKIEAIRALLALDGAD----- 62 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCH-------------HHHHHhhcCCCHHHHHHHHHhccCCC-----
Confidence 589999999999999999999999999999987543 22223 445554443 3333343422
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc--hh
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME--RF 222 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~--~~ 222 (344)
.+. .+.+...+.+.+...+......++||+.++|+.|+++|++++|+||+....+...++.+ ++. .+
T Consensus 63 ------~~~----~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~-~l~~~~~ 131 (220)
T TIGR03351 63 ------EAE----AQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL-GWTVGDD 131 (220)
T ss_pred ------HHH----HHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh-hhhhhcc
Confidence 111 23333333444444433344689999999999999999999999999999999999987 776 55
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCe
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
|+.+++ +++....||+|++|..+++++|+. |++|+||||+..|+++|+++||.
T Consensus 132 --f~~i~~------------------------~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~ 185 (220)
T TIGR03351 132 --VDAVVC------------------------PSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAG 185 (220)
T ss_pred --CCEEEc------------------------CCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCC
Confidence 688888 888888999999999999999997 79999999999999999999999
Q ss_pred E-EEEeCCCchhhhcc--ccccccCCc
Q 019226 302 C-VITYTSSTAEQDFK--DAIAIYPDL 325 (344)
Q Consensus 302 ~-v~v~~~~~~~~~l~--~~~~~~~~~ 325 (344)
+ |++.++......+. .+++++.++
T Consensus 186 ~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 186 AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 9 89988766554442 345555444
No 6
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.96 E-value=3.1e-28 Score=214.80 Aligned_cols=210 Identities=18% Similarity=0.273 Sum_probs=157.2
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
|++++|+||+||||+|+...+.++|.+++.+++..... .+++....|.+... .+...+
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~------------~~~~~~~~G~~~~~---~~~~~~------- 58 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYK------------REDVLPFIGPSLHD---TFSKID------- 58 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCC------------HHHHHHHhCcCHHH---HHHhcC-------
Confidence 36899999999999999999999999999998764221 22344455544322 222211
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
+... +.+...+.+.+..... ....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+
T Consensus 59 ------~~~~----~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~-gl~~~-- 124 (214)
T PRK13288 59 ------ESKV----EEMITTYREFNHEHHD-ELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT-GLDEF-- 124 (214)
T ss_pred ------HHHH----HHHHHHHHHHHHHhhh-hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhc--
Confidence 1121 2222223333332221 34689999999999999999999999999999999999997 77776
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ ++++...||+|++|..+++++|+++++|+||||+.+|+++|+++|+.+|+
T Consensus 125 f~~i~~------------------------~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~ 180 (214)
T PRK13288 125 FDVVIT------------------------LDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAG 180 (214)
T ss_pred eeEEEe------------------------cCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEE
Confidence 688888 88888899999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhcc--ccccccCCccccCHHHHHHHHHH
Q 019226 305 TYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 305 v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
+.++......+. .++++++ ++.+|.++++.
T Consensus 181 v~~g~~~~~~l~~~~~~~~i~-----~~~~l~~~i~~ 212 (214)
T PRK13288 181 VAWTIKGREYLEQYKPDFMLD-----KMSDLLAIVGD 212 (214)
T ss_pred EcCCCCCHHHHhhcCcCEEEC-----CHHHHHHHHhh
Confidence 988865544432 3445554 45566666554
No 7
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=2.1e-28 Score=218.07 Aligned_cols=190 Identities=23% Similarity=0.283 Sum_probs=145.0
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
.++|+|+||+||||+|+...+.++++++++++|.+... .+.+....|.+...... .....
T Consensus 10 ~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~---~~~~~----- 69 (229)
T PRK13226 10 RFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPIT------------LAQLRPVVSKGARAMLA---VAFPE----- 69 (229)
T ss_pred ccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhhhHHHHHHH---HHhcc-----
Confidence 45799999999999999999999999999999986322 23344445544333222 11100
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
...+..++.. +.+.+.|..... ....++||+.++|+.|+++|++++++||+........++.+ ++..+
T Consensus 70 ----~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~-~l~~~-- 137 (229)
T PRK13226 70 ----LDAAARDALI----PEFLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL-GWEQR-- 137 (229)
T ss_pred ----CChHHHHHHH----HHHHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-Cchhc--
Confidence 1112222222 333344443322 23689999999999999999999999999998888888886 66655
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ +++++..||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|+
T Consensus 138 f~~i~~------------------------~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~ 193 (229)
T PRK13226 138 CAVLIG------------------------GDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVA 193 (229)
T ss_pred ccEEEe------------------------cCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEE
Confidence 677777 78888899999999999999999999999999999999999999999999
Q ss_pred EeCCCc
Q 019226 305 TYTSST 310 (344)
Q Consensus 305 v~~~~~ 310 (344)
+.++..
T Consensus 194 v~~g~~ 199 (229)
T PRK13226 194 ALWGYR 199 (229)
T ss_pred EeecCC
Confidence 988765
No 8
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.96 E-value=2.3e-28 Score=216.36 Aligned_cols=217 Identities=30% Similarity=0.482 Sum_probs=165.0
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHH-HHcCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~ 144 (344)
++++|||||||||+|++..+.++|.+++.++|+..+. +......|.........+ +..+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~--- 64 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISD-------------EEIRELHGGGIARIIDLLRKLAAGEDP--- 64 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCH-------------HHHHHHHCCChHHHHHHHHHHhcCCcc---
Confidence 4799999999999999999999999999999988653 234444555544433333 33221100
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.+. ....+...+.... ......+.||+.++|++|+++|++++++|++.+..++..++.+ ++.++
T Consensus 65 -------~~~----~~~~~~~~~~~~~--~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~-gl~~~-- 128 (221)
T COG0637 65 -------ADL----AELERLLYEAEAL--ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL-GLLDY-- 128 (221)
T ss_pred -------cCH----HHHHHHHHHHHHh--hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc-cChhh--
Confidence 000 1111111111111 1245799999999999999999999999999999999999997 77776
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ ++++..+||+|++|..++++||+.|++|++|+|+.+++++|++|||.+|+
T Consensus 129 f~~~v~------------------------~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 129 FDVIVT------------------------ADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred cchhcc------------------------HHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 688888 89999999999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 305 TYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 305 v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
+..+... ...........+....++.++...+.+
T Consensus 185 v~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 218 (221)
T COG0637 185 VPAGHDR-PHLDPLDAHGADTVLLDLAELPALLEA 218 (221)
T ss_pred ecCCCCc-cccchhhhhhcchhhccHHHHHHHHHh
Confidence 9873332 234445667778888888888877664
No 9
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.96 E-value=5.6e-28 Score=214.38 Aligned_cols=210 Identities=23% Similarity=0.384 Sum_probs=157.3
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHH-HHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~ 143 (344)
.++|+|+||+||||+|+...+..++.+++.++|.+... .+.+...+|......... ....++.
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~---- 68 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISR------------REELPDTLGLRIDQVVDLWYARQPWN---- 68 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCH------------HHHHHHhhCCCHHHHHHHHHHhcCCC----
Confidence 46899999999999999999999999999999986432 123445555554443332 2222221
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
........+.+.+. +...+. ....++||+.++|+.|+++|++++|+||+....++..++.+ ++..+
T Consensus 69 -------~~~~~~~~~~~~~~----~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~- 134 (222)
T PRK10826 69 -------GPSRQEVVQRIIAR----VISLIE-ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF-DLRDY- 134 (222)
T ss_pred -------CCCHHHHHHHHHHH----HHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC-cchhc-
Confidence 11112222222222 222222 34689999999999999999999999999999999999986 77777
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++++.+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|
T Consensus 135 -f~~~~~------------------------~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i 189 (222)
T PRK10826 135 -FDALAS------------------------AEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSI 189 (222)
T ss_pred -ccEEEE------------------------cccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEE
Confidence 688888 8888899999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhh-hccccccccCCccccC
Q 019226 304 ITYTSSTAEQ-DFKDAIAIYPDLSNVR 329 (344)
Q Consensus 304 ~v~~~~~~~~-~l~~~~~~~~~~~~~~ 329 (344)
++..+....+ ....++.++.++.++.
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 190 VVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred EecCCccCchhhhhhhheeccCHHHHh
Confidence 9988765432 2233555666655554
No 10
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.96 E-value=2.9e-27 Score=209.50 Aligned_cols=214 Identities=24% Similarity=0.396 Sum_probs=164.6
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHH-HHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~ 143 (344)
+++++|+||+||||+|+...+..+++.+++++|.+... ...+....|.+....... +.....
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ig~~~~~~~~~~~~~~~~----- 64 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLD------------EEEIRQLIGLGLDELIERLLGEADE----- 64 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhcCCHHHHHHHHhccccc-----
Confidence 67899999999999999999999999999999998533 355666677766544332 222111
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
+......+.+.+.+.+.+.+.. ...++||+.++|+.|+++|++++|+||.....++..++++ ++..+
T Consensus 65 --------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~-gl~~~- 131 (220)
T COG0546 65 --------EAAAELVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL-GLADY- 131 (220)
T ss_pred --------hhHHHHHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh-CCccc-
Confidence 1111334444444444444432 2579999999999999999999999999999999999997 88887
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++....||+|..+..+++++|++|++++||||+.+|+++|++||+.+|
T Consensus 132 -F~~i~g------------------------~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 132 -FDVIVG------------------------GDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred -cceEEc------------------------CCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEE
Confidence 788887 7888889999999999999999998899999999999999999999999
Q ss_pred EEeCCCchhhhc--cccccccCCccccCHHHHHHHHH
Q 019226 304 ITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 304 ~v~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
.|.++....+.+ ..+++++. ++.+|...++
T Consensus 187 ~v~~g~~~~~~l~~~~~d~vi~-----~~~el~~~l~ 218 (220)
T COG0546 187 GVTWGYNSREELAQAGADVVID-----SLAELLALLA 218 (220)
T ss_pred EEECCCCCCcchhhcCCCEEEC-----CHHHHHHHHh
Confidence 999987532222 33455554 4455555544
No 11
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.96 E-value=1.3e-27 Score=216.13 Aligned_cols=191 Identities=24% Similarity=0.354 Sum_probs=142.3
Q ss_pred ccEEEEecCccccccchh-HHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-----------HHHHH
Q 019226 67 LQALIFDCDGVIIESEHL-HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-----------RWYFK 134 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 134 (344)
+|+|+|||||||+|+... +..++.+++.++|.+.+. +++...+|.+.... ..+..
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 68 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITL-------------EEARGPMGLGKWDHIRALLKMPAVAERWRA 68 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccH-------------HHHHHhcCccHHHHHHHHhcCHHHHHHHHH
Confidence 689999999999998653 578999999999976432 23333444443221 11222
Q ss_pred HcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHH
Q 019226 135 EHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE 214 (344)
Q Consensus 135 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~ 214 (344)
.+|.+ .+.+. .+.+.+.+.+.+..... ....++||+.++|+.|+++|++++|+||+....++.+++
T Consensus 69 ~~~~~---------~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~ 134 (253)
T TIGR01422 69 KFGRL---------PTEAD----IEAIYEAFEPLQLAKLA-EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAP 134 (253)
T ss_pred HhCCC---------CCHHH----HHHHHHHHHHHHHHHHH-hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHH
Confidence 23321 11122 22233333333333322 346899999999999999999999999999999999999
Q ss_pred HhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHH
Q 019226 215 NLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQ 293 (344)
Q Consensus 215 ~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~Di~ 293 (344)
.+ ++..+. ++.+++ ++++...||+|++|..+++++|+. |++|+||||+.+|++
T Consensus 135 ~~-gl~~~f-~d~ii~------------------------~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~ 188 (253)
T TIGR01422 135 EA-ALQGYR-PDYNVT------------------------TDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIE 188 (253)
T ss_pred HH-HhcCCC-CceEEc------------------------cccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHH
Confidence 87 666652 377887 888888999999999999999995 999999999999999
Q ss_pred HHHHcCCeEEEEeCCCc
Q 019226 294 AATRAGMACVITYTSST 310 (344)
Q Consensus 294 ~a~~aG~~~v~v~~~~~ 310 (344)
+|+++||.+|+|.++..
T Consensus 189 aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 189 EGRNAGMWTVGLILSSN 205 (253)
T ss_pred HHHHCCCeEEEEecCCc
Confidence 99999999999988764
No 12
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.96 E-value=2.5e-27 Score=216.05 Aligned_cols=194 Identities=25% Similarity=0.347 Sum_probs=141.7
Q ss_pred CCCccEEEEecCccccccchh-HHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHH---------
Q 019226 64 SQSLQALIFDCDGVIIESEHL-HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWY--------- 132 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------- 132 (344)
++++|+|+||+||||+|+... +..+|.+++.++|.+.+. +++...+|.+... +...
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~ 67 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITL-------------EEARGPMGLGKWDHIRALLKMPRVAAR 67 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHhcHHHHHH
Confidence 356899999999999998654 468999999999976432 2333444444322 1111
Q ss_pred -HHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH
Q 019226 133 -FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (344)
Q Consensus 133 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~ 211 (344)
...+|.+ .+.++. +.+...+.+.+...+. ....++||+.++|+.|+++|++++|+||.....+..
T Consensus 68 ~~~~~g~~---------~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~ 133 (267)
T PRK13478 68 WQAVFGRL---------PTEADV----DALYAAFEPLQIAKLA-DYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDV 133 (267)
T ss_pred HHHHhCCC---------CCHHHH----HHHHHHHHHHHHHHHh-hcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHH
Confidence 1122211 111222 2222333333333322 346899999999999999999999999999998888
Q ss_pred HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHh
Q 019226 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVI 290 (344)
Q Consensus 212 ~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~ 290 (344)
.++.+ ++..+. ++.+++ ++++...||+|++|..+++++|+. +++|+||||+.+
T Consensus 134 ~l~~~-~l~~~~-~d~i~~------------------------~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~ 187 (267)
T PRK13478 134 VVPLA-AAQGYR-PDHVVT------------------------TDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVP 187 (267)
T ss_pred HHHHH-hhcCCC-ceEEEc------------------------CCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHH
Confidence 88886 554442 377777 888888999999999999999996 699999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCc
Q 019226 291 GLQAATRAGMACVITYTSST 310 (344)
Q Consensus 291 Di~~a~~aG~~~v~v~~~~~ 310 (344)
|+++|+++|+.+|+|.++..
T Consensus 188 Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 188 GIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHHHHHHCCCEEEEEccCcc
Confidence 99999999999999988765
No 13
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.96 E-value=1.5e-27 Score=210.12 Aligned_cols=204 Identities=22% Similarity=0.354 Sum_probs=152.6
Q ss_pred EEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCccccCCCC
Q 019226 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDNPP 148 (344)
Q Consensus 70 viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 148 (344)
|+||+||||+|+...+.+++.+++.++|.+... ...+....|.+.... ..++...+..
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~--------- 59 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPAT------------LARVIGFIGNGVPVLMERVLAWAGQE--------- 59 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhcccHHHHHHHHhhccccc---------
Confidence 699999999999999999999999999986322 223444455554433 2333333321
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccccee
Q 019226 149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228 (344)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~ 228 (344)
.+.+. .+.+.+.+.+.|..... ....++||+.++|+.|+++|++++|+||+....++..++++ ++..+ |+.+
T Consensus 60 ~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~~ 131 (213)
T TIGR01449 60 PDAQR----VAELRKLFDRHYEEVAG-ELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKY--FSVL 131 (213)
T ss_pred cChHH----HHHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CcHhh--CcEE
Confidence 11111 23334444444554432 24689999999999999999999999999999999999997 77766 6888
Q ss_pred ecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 229 LADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
++ ++++...||+|++|..+++++|+++++|++|||+.+|+++|+++|+.++++.++
T Consensus 132 ~~------------------------~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g 187 (213)
T TIGR01449 132 IG------------------------GDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYG 187 (213)
T ss_pred Ee------------------------cCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccC
Confidence 87 888888999999999999999999999999999999999999999999999887
Q ss_pred Cchhhhc--cccccccCCcc
Q 019226 309 STAEQDF--KDAIAIYPDLS 326 (344)
Q Consensus 309 ~~~~~~l--~~~~~~~~~~~ 326 (344)
......+ ..+++++.++.
T Consensus 188 ~~~~~~l~~~~a~~~i~~~~ 207 (213)
T TIGR01449 188 YRYGEAIDLLPPDVLYDSLN 207 (213)
T ss_pred CCCCcchhhcCCCeEeCCHH
Confidence 6543333 23455554443
No 14
>PRK11587 putative phosphatase; Provisional
Probab=99.96 E-value=2.1e-27 Score=210.17 Aligned_cols=204 Identities=17% Similarity=0.324 Sum_probs=147.3
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHh-hCCChhhHHHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ-IGGGKPKMRWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~ 143 (344)
|++|+|+|||||||+|+...+..+++++++++|++. ..+... .|.+.... ++.+...
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~---------------~~~~~~~~g~~~~~~---~~~~~~~---- 58 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP---------------DEVLNFIHGKQAITS---LRHFMAG---- 58 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH---------------HHHHHHHcCCCHHHH---HHHHhcc----
Confidence 468999999999999999999999999999999752 122222 34443332 2221100
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
...+ +..+.+... ..+.... .....++||+.++|+.|+++|++++|+||+........++.. ++..
T Consensus 59 -----~~~~---~~~~~~~~~--~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~-~l~~-- 124 (218)
T PRK11587 59 -----ASEA---EIQAEFTRL--EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA-GLPA-- 124 (218)
T ss_pred -----CCcH---HHHHHHHHH--HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc-CCCC--
Confidence 0111 111222111 1111111 245689999999999999999999999999887776666665 5533
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
++.+++ ++++...||+|++|..+++++|+.|++|+||||+..|+++|+++|+.+|
T Consensus 125 -~~~i~~------------------------~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i 179 (218)
T PRK11587 125 -PEVFVT------------------------AERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVI 179 (218)
T ss_pred -ccEEEE------------------------HHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEE
Confidence 466666 7788889999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccccccccCCccccCH
Q 019226 304 ITYTSSTAEQDFKDAIAIYPDLSNVRL 330 (344)
Q Consensus 304 ~v~~~~~~~~~l~~~~~~~~~~~~~~~ 330 (344)
++.++... ..+..+++++.++.++..
T Consensus 180 ~v~~~~~~-~~~~~~~~~~~~~~el~~ 205 (218)
T PRK11587 180 AVNAPADT-PRLDEVDLVLHSLEQLTV 205 (218)
T ss_pred EECCCCch-hhhccCCEEecchhheeE
Confidence 99876532 334457778888777654
No 15
>PLN02940 riboflavin kinase
Probab=99.95 E-value=3.8e-27 Score=224.42 Aligned_cols=211 Identities=21% Similarity=0.374 Sum_probs=164.4
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~ 143 (344)
..+++|+||+||||+|+...+.+++.+++.++|.+... +++...+|..... ...++..++.+.
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~--- 72 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDG-------------REAQKIVGKTPLEAAATVVEDYGLPC--- 72 (382)
T ss_pred ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCCC---
Confidence 44899999999999999999999999999999976432 2345556665544 344555555431
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
..+++.+.+.+.+ .... ....++||+.++|+.|+++|++++|+||.....+...++...++..+
T Consensus 73 ---------~~~~~~~~~~~~~----~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~- 136 (382)
T PLN02940 73 ---------STDEFNSEITPLL----SEQW--CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES- 136 (382)
T ss_pred ---------CHHHHHHHHHHHH----HHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-
Confidence 1222222333222 2222 24689999999999999999999999999998888888733377666
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ ++++...||+|++|..+++++|++|++|++|||+..|+++|+++||.+|
T Consensus 137 -Fd~ii~------------------------~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 137 -FSVIVG------------------------GDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred -CCEEEe------------------------hhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 789988 8999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccccccccCCccccCHHH
Q 019226 304 ITYTSSTAEQDFKDAIAIYPDLSNVRLKD 332 (344)
Q Consensus 304 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~ 332 (344)
++.++.........++..++++.++...+
T Consensus 192 ~v~~g~~~~~~~~~ad~~i~sl~el~~~~ 220 (382)
T PLN02940 192 AVPSIPKQTHLYSSADEVINSLLDLQPEK 220 (382)
T ss_pred EECCCCcchhhccCccEEeCCHhHcCHHH
Confidence 99887654444566788888888876554
No 16
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=1.5e-26 Score=211.14 Aligned_cols=217 Identities=22% Similarity=0.305 Sum_probs=158.2
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHH-HHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 143 (344)
..+|+|+|||||||+|+...+..++.+++.++|.+... .+.+....|.+...+.. .+...
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~l~~~------- 71 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAG------------LEAVRHWVGNGAPVLVRRALAGS------- 71 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhChhHHHHHHHHhccc-------
Confidence 46889999999999999999999999999999986433 23344455555443322 21110
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
+.....++. ..+.+.+.+.+.|... .....++||+.++|+.|+++|++++|+||+....++..++.+ ++..+
T Consensus 72 ~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~-~i~~~- 143 (272)
T PRK13223 72 IDHDGVDDE----LAEQALALFMEAYADS--HELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM-KIGRY- 143 (272)
T ss_pred ccccCCCHH----HHHHHHHHHHHHHHhc--CcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc-CcHhh-
Confidence 001111111 2233334444444432 123578999999999999999999999999998888888886 77776
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++++..||+|++|+.+++++|+++++|++|||+.+|+++|+++|+.++
T Consensus 144 -f~~i~~------------------------~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i 198 (272)
T PRK13223 144 -FRWIIG------------------------GDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCV 198 (272)
T ss_pred -CeEEEe------------------------cCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 677777 8888889999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhcc--ccccccCCccccCHHHHHHHHH
Q 019226 304 ITYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 304 ~v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
+|.++......+. .+++++.+ +.+|.+++.
T Consensus 199 ~v~~G~~~~~~l~~~~~~~vi~~-----l~el~~~~~ 230 (272)
T PRK13223 199 ALSYGYNHGRPIAEESPALVIDD-----LRALLPGCA 230 (272)
T ss_pred EEecCCCCchhhhhcCCCEEECC-----HHHHHHHHh
Confidence 9988765444432 35555544 444544443
No 17
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.95 E-value=4.3e-26 Score=199.78 Aligned_cols=200 Identities=26% Similarity=0.397 Sum_probs=149.0
Q ss_pred EEEecCccccccchhHHHHHHHHHHh-cCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccccCCCC
Q 019226 70 LIFDCDGVIIESEHLHRQAYNDAFSH-FNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPP 148 (344)
Q Consensus 70 viFD~DGTL~d~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 148 (344)
|+|||||||+|+...+.+++++++.+ +|.+... .+.+....|.... ..++..|.+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~---~~~~~~~~~--------- 56 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAP------------FEEYRRHLGRYFP---DIMRIMGLP--------- 56 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCC------------HHHHHHHhCccHH---HHHHHcCCC---------
Confidence 68999999999999999999999998 4764322 2334444554433 333333322
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccccee
Q 019226 149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228 (344)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~ 228 (344)
... .+.+ ..+.+. . .....++||+.++|+.|+++|++++|+||+....++..++++ ++..+ |+.+
T Consensus 57 --~~~----~~~~---~~~~~~-~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-~l~~~--f~~i 121 (205)
T TIGR01454 57 --LEM----EEPF---VRESYR-L--AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL-GLLPL--FDHV 121 (205)
T ss_pred --HHH----HHHH---HHHHHH-h--hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc-CChhh--eeeE
Confidence 010 0111 111121 1 145789999999999999999999999999999899989886 77766 6778
Q ss_pred ecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 229 LADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
++ +++...+||++++|..+++++|+++++|+||||+.+|+++|+++|+.+|++.++
T Consensus 122 ~~------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g 177 (205)
T TIGR01454 122 IG------------------------SDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWG 177 (205)
T ss_pred Ee------------------------cCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEec
Confidence 77 788888999999999999999999999999999999999999999999999988
Q ss_pred Cchhhhcc--ccccccCCccccCHHHHHHHH
Q 019226 309 STAEQDFK--DAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 309 ~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll 337 (344)
....+.+. .+++++.+ +.+|..++
T Consensus 178 ~~~~~~l~~~~~~~~~~~-----~~~l~~~~ 203 (205)
T TIGR01454 178 EGDAGELLAARPDFLLRK-----PQSLLALC 203 (205)
T ss_pred CCChhhhhhcCCCeeeCC-----HHHHHHHh
Confidence 76655553 34555544 44554444
No 18
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.95 E-value=3.4e-26 Score=196.86 Aligned_cols=182 Identities=29% Similarity=0.522 Sum_probs=137.1
Q ss_pred EEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccccCCC
Q 019226 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIFDNP 147 (344)
Q Consensus 69 ~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~ 147 (344)
+|+||+||||+|+...+..++.+++.++|++... . ......+.+... +...+.+.|.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~----------~---~~~~~~g~~~~~~~~~~~~~~~~~-------- 59 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDE----------E---FNESLKGVSREDSLERILDLGGKK-------- 59 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCH----------H---HHHHhcCCChHHHHHHHHHhcCCC--------
Confidence 5899999999999999999999999999986332 1 223334444433 34455555542
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc
Q 019226 148 PVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226 (344)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d 226 (344)
.+++...++. +.+.+.|.+.+.. ....++||+.++|+.|+++|++++|+||+.. ....++.+ ++..+ |+
T Consensus 60 -~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~-~l~~~--f~ 129 (185)
T TIGR01990 60 -YSEEEKEELA----ERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL-GLIDY--FD 129 (185)
T ss_pred -CCHHHHHHHH----HHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc-CcHhh--Cc
Confidence 1222222222 2233333333221 2357899999999999999999999999754 45677776 77766 68
Q ss_pred eeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 227 CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
.+++ +++++..||+|++|..+++++++++++|+||||+.+|+++|+++||.+|+|
T Consensus 130 ~~~~------------------------~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 130 AIVD------------------------PAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred EEEe------------------------hhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence 8888 888889999999999999999999999999999999999999999999986
No 19
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.95 E-value=1.9e-26 Score=204.22 Aligned_cols=192 Identities=21% Similarity=0.367 Sum_probs=135.1
Q ss_pred CccEEEEecCccccccchhHHHHHHHHH---HhcCCCCCCCccCCCCCChHHHHHHHH---hhCCChhh-HHHHHHHcCC
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAF---SHFNVRCDPSSQQSLNWDPEFYDVLQN---QIGGGKPK-MRWYFKEHGW 138 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~g~ 138 (344)
|+++|+||+||||+|+...+.+++..+. .++|++.+. .+.+..+.. ..+..... ....+...+.
T Consensus 1 ~~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T TIGR02253 1 MIKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDF---------EEAYEELLKLIKEYGSNYPTHFDYLIRRLWE 71 (221)
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCH---------HHHHHHHHHHHHHhccccCcchHHHHHHHhh
Confidence 4789999999999999988877776554 456665332 122222211 11111111 1111111110
Q ss_pred CCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhc
Q 019226 139 PSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218 (344)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~ 218 (344)
. ... +.+.+.....+... .....++||+.++|+.|+++|++++|+||+....+...++.+ +
T Consensus 72 ~------------~~~----~~~~~~~~~~~~~~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~-~ 132 (221)
T TIGR02253 72 E------------YNP----KLVAAFVYAYHKLK--FAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL-G 132 (221)
T ss_pred h------------cCH----HHHHHHHHHHHHHH--HHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC-C
Confidence 0 000 11111111111111 123689999999999999999999999999988889899886 7
Q ss_pred cchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHH
Q 019226 219 MERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATR 297 (344)
Q Consensus 219 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~ 297 (344)
+..+ |+.+++ +++++..||+|++|..+++++|+++++|+||||+. +|+.+|++
T Consensus 133 l~~~--f~~i~~------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~ 186 (221)
T TIGR02253 133 VRDF--FDAVIT------------------------SEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKN 186 (221)
T ss_pred hHHh--ccEEEE------------------------eccCCCCCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHH
Confidence 7776 688888 89999999999999999999999999999999998 89999999
Q ss_pred cCCeEEEEeCCCch
Q 019226 298 AGMACVITYTSSTA 311 (344)
Q Consensus 298 aG~~~v~v~~~~~~ 311 (344)
+|+.+|++.++...
T Consensus 187 aG~~~i~~~~~~~~ 200 (221)
T TIGR02253 187 LGMKTVWINQGKSS 200 (221)
T ss_pred CCCEEEEECCCCCc
Confidence 99999999887653
No 20
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=1.2e-25 Score=199.63 Aligned_cols=217 Identities=24% Similarity=0.337 Sum_probs=159.2
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHH-HHHHHcCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 142 (344)
.+++++|+||+||||+|+...+..++.+++.++|.+... ...+....+.+...+. ..+...+.
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~---- 66 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAG------------EERVRTWVGNGADVLVERALTWAGR---- 66 (226)
T ss_pred CCcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhCccHHHHHHHHHhhccC----
Confidence 367999999999999999988899999999999876433 2344445555544332 23333221
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
....++. +.+...+.+.|..... ....++||+.++++.|+++|++++++||+....++..++.+ ++..+
T Consensus 67 -----~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~ 135 (226)
T PRK13222 67 -----EPDEELL----EKLRELFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL-GIADY 135 (226)
T ss_pred -----CccHHHH----HHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCccC
Confidence 1122222 2233334444444321 23689999999999999999999999999998888999886 76655
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ ++++...||+|++|..+++++++++++|++|||+.+|+++|+++|+.+
T Consensus 136 --f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 136 --FSVVIG------------------------GDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPS 189 (226)
T ss_pred --ccEEEc------------------------CCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcE
Confidence 677777 788888999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchhhhc--cccccccCCccccCHHHHHHHHH
Q 019226 303 VITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 303 v~v~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
+++.++......+ ..+.+++.+ +.+|..++.
T Consensus 190 i~v~~g~~~~~~~~~~~~~~~i~~-----~~~l~~~l~ 222 (226)
T PRK13222 190 VGVTYGYNYGEPIALSEPDVVIDH-----FAELLPLLG 222 (226)
T ss_pred EEECcCCCCccchhhcCCCEEECC-----HHHHHHHHH
Confidence 9998876533222 234555544 455555543
No 21
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.94 E-value=2.3e-26 Score=203.83 Aligned_cols=186 Identities=26% Similarity=0.460 Sum_probs=138.7
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~ 143 (344)
+++++|+||+||||+|+...+.++|.+++.++|++.+. ++ .+....|..... ...++..+|.+.
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~---------~~---~~~~~~g~~~~~~~~~~~~~~~~~~--- 66 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSL---------EE---VFKRFKGVKLYEIIDIISKEHGVTL--- 66 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCH---------HH---HHHHhcCCCHHHHHHHHHHHhCCCC---
Confidence 35899999999999999999999999999999986432 11 122233433333 334445555431
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
..+++...+.+ .+.... .....++||+.++|+.| +++++|+||+....++..++.+ ++..+
T Consensus 67 ---------~~~~~~~~~~~----~~~~~~-~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~-~l~~~- 127 (221)
T PRK10563 67 ---------AKAELEPVYRA----EVARLF-DSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKT-GMLHY- 127 (221)
T ss_pred ---------CHHHHHHHHHH----HHHHHH-HccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhc-ChHHh-
Confidence 11222222222 222221 13478999999999999 3899999999988899989886 77766
Q ss_pred ccc-eeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 224 GLD-CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 224 ~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+ .+++ +++++..||+|++|..+++++|++|++|+||||+..|+++|+++|+.+
T Consensus 128 -F~~~v~~------------------------~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 182 (221)
T PRK10563 128 -FPDKLFS------------------------GYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEV 182 (221)
T ss_pred -CcceEee------------------------HHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEE
Confidence 54 5666 778888999999999999999999999999999999999999999999
Q ss_pred EEEeCCC
Q 019226 303 VITYTSS 309 (344)
Q Consensus 303 v~v~~~~ 309 (344)
|++..+.
T Consensus 183 i~~~~~~ 189 (221)
T PRK10563 183 FYFCADP 189 (221)
T ss_pred EEECCCC
Confidence 9886543
No 22
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=4.7e-26 Score=207.40 Aligned_cols=210 Identities=18% Similarity=0.208 Sum_probs=152.9
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
..+++|+||+||||+|+...+..+++++++++|++... . +.+....+... ..+++..+.+
T Consensus 60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~---------~---~~~~~~~g~~~---~~i~~~~~~~----- 119 (273)
T PRK13225 60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPID---------E---RDYAQLRQWSS---RTIVRRAGLS----- 119 (273)
T ss_pred hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCC---------H---HHHHHHhCccH---HHHHHHcCCC-----
Confidence 46999999999999999999999999999999986432 1 22333333322 2333333321
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
++..+++. ..+.+.+.... ...+++||+.++|+.|+++|++++|+||+....+...++++ ++..+
T Consensus 120 ------~~~~~~~~----~~~~~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~-gl~~~-- 184 (273)
T PRK13225 120 ------PWQQARLL----QRVQRQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ-GLRSL-- 184 (273)
T ss_pred ------HHHHHHHH----HHHHHHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhh--
Confidence 12222222 22333333321 34689999999999999999999999999999999999997 77766
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ ++++ +++++.|..+++++++++++|+||||+.+|+++|+++||.+|+
T Consensus 185 F~~vi~------------------------~~~~---~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 185 FSVVQA------------------------GTPI---LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVA 237 (273)
T ss_pred eEEEEe------------------------cCCC---CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEE
Confidence 577666 5554 3457899999999999999999999999999999999999999
Q ss_pred EeCCCchhhhcc--ccccccCCccccCHHHHHHHHHHhh
Q 019226 305 TYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 305 v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
+.++......+. .+++++++ +.+|.+++..++
T Consensus 238 v~~g~~~~~~l~~~~ad~~i~~-----~~eL~~~~~~~~ 271 (273)
T PRK13225 238 VTWGFNDRQSLVAACPDWLLET-----PSDLLQAVTQLM 271 (273)
T ss_pred EecCCCCHHHHHHCCCCEEECC-----HHHHHHHHHHHh
Confidence 998877655442 35555554 455555555543
No 23
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.94 E-value=8.7e-26 Score=194.35 Aligned_cols=184 Identities=29% Similarity=0.504 Sum_probs=139.6
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccccC
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIFD 145 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~ 145 (344)
+|+|+||+||||+|+...+..++.++++++|.+.+ . .......|..... ....+..++..
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~----------~---~~~~~~~g~~~~~~~~~~~~~~~~~------ 61 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD----------K---QYNTSLGGLSREDILRAILKLRKPG------ 61 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC----------H---HHHHHcCCCCHHHHHHHHHHhcCCC------
Confidence 58999999999999999999999999999987532 1 1122333443333 23344433211
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccc
Q 019226 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL 225 (344)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~ 225 (344)
...+. .+.+.+.+.+.|.+.+......++||+.++|+.|+++|++++++||+ ..++..++.+ ++..+ |
T Consensus 62 ---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~-~l~~~--f 129 (185)
T TIGR02009 62 ---LSLET----IHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL-GLTDY--F 129 (185)
T ss_pred ---CCHHH----HHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc-ChHHH--C
Confidence 11122 22333444445554443345789999999999999999999999998 5578888886 77777 6
Q ss_pred ceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 226 DCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
+.+++ +++++..||+|++|..+++++|+++++|++|||+..|+++|+++|+.+|+|
T Consensus 130 ~~v~~------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 130 DAIVD------------------------ADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CEeee------------------------hhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 88887 888888999999999999999999999999999999999999999999864
No 24
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.94 E-value=9.8e-26 Score=194.67 Aligned_cols=184 Identities=27% Similarity=0.469 Sum_probs=141.0
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 142 (344)
+.++++|+||+||||+|+...+.++|.+++.++|.+.+. ..+....|...... ...+..++..
T Consensus 2 ~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~--- 65 (188)
T PRK10725 2 YDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDE-------------QAMVALNGSPTWRIAQAIIELNQAD--- 65 (188)
T ss_pred CCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCC---
Confidence 456899999999999999999999999999999986332 23444455554433 3333333321
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
...++ +...+.+.+..... ....++|+ .++|..|++. ++++|+||+....++..++++ ++..+
T Consensus 66 ---------~~~~~----~~~~~~~~~~~~~~-~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~-~l~~~ 128 (188)
T PRK10725 66 ---------LDPHA----LAREKTEAVKSMLL-DSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL-GLRRY 128 (188)
T ss_pred ---------CCHHH----HHHHHHHHHHHHHh-ccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC-CcHhH
Confidence 11111 22222233333322 34578886 5899999876 899999999999999999997 77777
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ +++++..||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+
T Consensus 129 --fd~i~~------------------------~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 129 --FDAVVA------------------------ADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred --ceEEEe------------------------hhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 688888 889989999999999999999999999999999999999999999999
Q ss_pred EEEe
Q 019226 303 VITY 306 (344)
Q Consensus 303 v~v~ 306 (344)
|++.
T Consensus 183 i~~~ 186 (188)
T PRK10725 183 VDVR 186 (188)
T ss_pred Eeec
Confidence 9874
No 25
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.94 E-value=6.1e-26 Score=197.73 Aligned_cols=106 Identities=23% Similarity=0.388 Sum_probs=98.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.+++ +++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-gl~~~--fd~i~~------------------------s~~ 143 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA-GLDDP--FDAVLS------------------------ADA 143 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC-CChhh--hheeEe------------------------hhh
Confidence 579999999999999999999999999999999999987 77766 688888 899
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
++..||+|++|..+++++|++|++|+||||+.+|+++|+++||.+||++++..
T Consensus 144 ~~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~~ 196 (198)
T TIGR01428 144 VRAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPGE 196 (198)
T ss_pred cCCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999987654
No 26
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.94 E-value=8.7e-25 Score=230.84 Aligned_cols=219 Identities=29% Similarity=0.430 Sum_probs=167.0
Q ss_pred CCCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHH-HHHHcCCCCc
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSS 141 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~ 141 (344)
..+++++|+|||||||+|+...+.++|.++++++|++... +.+...+|.+...+.. ....++++
T Consensus 71 ~~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~-------------e~~~~~~G~~~~~~~~~~~~~~~l~-- 135 (1057)
T PLN02919 71 EWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTV-------------EDFVPFMGTGEANFLGGVASVKGVK-- 135 (1057)
T ss_pred cCCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCCCHHHHHHHHHHhcCCC--
Confidence 3568999999999999999999999999999999986432 2344555655544332 22233321
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc-
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME- 220 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~- 220 (344)
+.+.++..+.+.+.+.+.|... ....++||+.++|+.|+++|++++|+||.....++..++.+ ++.
T Consensus 136 ---------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~-gl~~ 202 (1057)
T PLN02919 136 ---------GFDPDAAKKRFFEIYLEKYAKP---NSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA-GLPL 202 (1057)
T ss_pred ---------CCCHHHHHHHHHHHHHHHhhhc---ccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc-CCCh
Confidence 1111222222322232322211 22357999999999999999999999999999999999887 764
Q ss_pred hhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 221 RFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 221 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
.+ |+.+++ ++++...||+|++|..+++++|++|++|+||||+..|+++|+++||
T Consensus 203 ~~--Fd~iv~------------------------~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 203 SM--FDAIVS------------------------ADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred hH--CCEEEE------------------------CcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCC
Confidence 44 688888 8999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCchhhhc--cccccccCCccccCHHHHHHH
Q 019226 301 ACVITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 301 ~~v~v~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~l 336 (344)
.+|++.++... +.+ ..+++++.++.++++.++...
T Consensus 257 ~~I~v~~~~~~-~~L~~~~a~~vi~~l~el~~~~~~~~ 293 (1057)
T PLN02919 257 RCIAVTTTLSE-EILKDAGPSLIRKDIGNISLSDILTG 293 (1057)
T ss_pred EEEEECCCCCH-HHHhhCCCCEEECChHHCCHHHHHhc
Confidence 99999987643 444 357789999999998777654
No 27
>PRK09449 dUMP phosphatase; Provisional
Probab=99.94 E-value=1.7e-25 Score=198.61 Aligned_cols=128 Identities=22% Similarity=0.384 Sum_probs=104.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+ +|++++|+||+....++..++++ ++..+ |+.+++ +++
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~-~l~~~--fd~v~~------------------------~~~ 145 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT-GLRDY--FDLLVI------------------------SEQ 145 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC-ChHHH--cCEEEE------------------------ECc
Confidence 679999999999999 57999999999999899889886 77776 788888 899
Q ss_pred CCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
++..||+|++|..+++++|+. +++|+||||+. +|+++|+++||.+|++.++...... ...+++..-++.+|.+
T Consensus 146 ~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~-----~~~~~~~i~~~~el~~ 220 (224)
T PRK09449 146 VGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPE-----GIAPTYQVSSLSELEQ 220 (224)
T ss_pred cCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCC-----CCCCeEEECCHHHHHH
Confidence 999999999999999999985 58999999998 6999999999999999754321111 1124444445666666
Q ss_pred HHH
Q 019226 336 LLQ 338 (344)
Q Consensus 336 ll~ 338 (344)
++.
T Consensus 221 ~l~ 223 (224)
T PRK09449 221 LLC 223 (224)
T ss_pred HHh
Confidence 553
No 28
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.94 E-value=4e-25 Score=193.28 Aligned_cols=187 Identities=22% Similarity=0.387 Sum_probs=130.7
Q ss_pred cEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHh------h----CCChhh-----HHHH
Q 019226 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ------I----GGGKPK-----MRWY 132 (344)
Q Consensus 68 k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~-----~~~~ 132 (344)
|+|+||+||||+|+...+..++.++++++|++..... ....+...+... . |..... +...
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDE-----LEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHH-----HHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 5899999999999999999999999999998754310 000111111110 1 111111 1222
Q ss_pred HHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHH
Q 019226 133 FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (344)
Q Consensus 133 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~ 212 (344)
+...|.+ ..+. +...+.+.+..........++||+.++|+.|+++|++++|+||+... ....
T Consensus 76 ~~~~~~~----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~ 137 (203)
T TIGR02252 76 FGRAGVP----------DPES-------FEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGL 137 (203)
T ss_pred HHhcCCC----------Cchh-------HHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHH
Confidence 2222211 0111 11112222222211234578999999999999999999999998875 4667
Q ss_pred HHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hh
Q 019226 213 LENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IG 291 (344)
Q Consensus 213 l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~D 291 (344)
++.+ ++..+ |+.++. +++++..||+|++|..+++++|++|++|+||||+. +|
T Consensus 138 l~~~-~l~~~--fd~i~~------------------------s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~D 190 (203)
T TIGR02252 138 LEAL-GLLEY--FDFVVT------------------------SYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRND 190 (203)
T ss_pred HHHC-CcHHh--cceEEe------------------------ecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHH
Confidence 7775 77666 688888 88888999999999999999999999999999998 79
Q ss_pred HHHHHHcCCeEEE
Q 019226 292 LQAATRAGMACVI 304 (344)
Q Consensus 292 i~~a~~aG~~~v~ 304 (344)
+++|+++||.+||
T Consensus 191 i~~A~~aG~~~i~ 203 (203)
T TIGR02252 191 YQGARAAGWRALL 203 (203)
T ss_pred HHHHHHcCCeeeC
Confidence 9999999999885
No 29
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.93 E-value=2e-25 Score=197.84 Aligned_cols=185 Identities=18% Similarity=0.337 Sum_probs=135.9
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHH-------hhCCChh---h-----HHH
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-------QIGGGKP---K-----MRW 131 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~---~-----~~~ 131 (344)
+|+|+||+||||+|+...+.+++.+++.++|++.+. .....+.. ....+.. . +..
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTE----------DMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSA 70 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccH----------HHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 589999999999999999999999999998876432 11111111 0000000 0 011
Q ss_pred HHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH
Q 019226 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (344)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~ 211 (344)
.+...|.+. . .+.+.+.|..... ....++||+.++|+.|+++ ++++++||+....+..
T Consensus 71 ~~~~~~~~~------------~--------~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~ 128 (224)
T TIGR02254 71 LLKEYNTEA------------D--------EALLNQKYLRFLE-EGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYK 128 (224)
T ss_pred HHHHhCCCC------------c--------HHHHHHHHHHHHh-ccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHH
Confidence 111221100 0 0012222333221 2368999999999999999 9999999999999999
Q ss_pred HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEecCH-
Q 019226 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRL-GISEKDCLVVEDSV- 289 (344)
Q Consensus 212 ~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~l-gv~~~~~i~vGDs~- 289 (344)
.++.+ ++..+ |+.+++ +++++..||+|++|..+++++ |++|++|+||||+.
T Consensus 129 ~l~~~-~l~~~--fd~i~~------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~ 181 (224)
T TIGR02254 129 RLRKS-GLFPF--FDDIFV------------------------SEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLT 181 (224)
T ss_pred HHHHC-CcHhh--cCEEEE------------------------cCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCcH
Confidence 99886 87777 688888 888889999999999999999 99999999999998
Q ss_pred hhHHHHHHcCCeEEEEeCCCc
Q 019226 290 IGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 290 ~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+|+++|+++||.+|++.++..
T Consensus 182 ~di~~A~~~G~~~i~~~~~~~ 202 (224)
T TIGR02254 182 ADIKGGQNAGLDTCWMNPDMH 202 (224)
T ss_pred HHHHHHHHCCCcEEEECCCCC
Confidence 799999999999999987644
No 30
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.93 E-value=1.1e-24 Score=195.39 Aligned_cols=219 Identities=14% Similarity=0.194 Sum_probs=146.4
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCC------------hhhHHH
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG------------KPKMRW 131 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 131 (344)
+.++|+|+||+||||+|+...+..+++++++.++..... ...|.......+...++.. ...+..
T Consensus 7 ~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 82 (238)
T PRK10748 7 LGRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPA----LRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQ 82 (238)
T ss_pred CCCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcc----hhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHH
Confidence 346899999999999999999989888877765321110 0013223233333322111 112333
Q ss_pred HHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH
Q 019226 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (344)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~ 211 (344)
.+..+|++ .+..+ ...+...+.+.... ....++||+.++|+.|+++ ++++++||++..
T Consensus 83 ~~~~~g~~-----------~~~~~----~~~~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~---- 140 (238)
T PRK10748 83 AMLDAGLS-----------AEEAS----AGADAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ---- 140 (238)
T ss_pred HHHHcCCC-----------HHHHH----HHHHHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECCCch----
Confidence 44455432 11111 11111112222211 2368999999999999976 999999998875
Q ss_pred HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-h
Q 019226 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-I 290 (344)
Q Consensus 212 ~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~ 290 (344)
++.. ++..+ |+.+++ +++++..||+|++|..+++++|++|++|+||||+. .
T Consensus 141 -~~~~-gl~~~--fd~i~~------------------------~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~ 192 (238)
T PRK10748 141 -PELF-GLGDY--FEFVLR------------------------AGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTT 192 (238)
T ss_pred -HHHC-CcHHh--hceeEe------------------------cccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHH
Confidence 3444 77776 688888 88888899999999999999999999999999995 8
Q ss_pred hHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 291 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 291 Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
|+++|+++||.++|++.+...... ..+..+.|+....++.+|.++|
T Consensus 193 Di~~A~~aG~~~i~v~~~~~~~~~-~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 193 DVAGAIRCGMQACWINPENGDLMQ-TWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred HHHHHHHCCCeEEEEcCCCccccc-cccccCCCCEEECCHHHHHhhC
Confidence 999999999999999876543111 1234466777766777776653
No 31
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.93 E-value=1e-24 Score=193.56 Aligned_cols=132 Identities=20% Similarity=0.318 Sum_probs=108.4
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
....++||+.++|+.|+++|++++|+||+....++..++++ ++..+ |+.+++ +
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~-~l~~~--fd~iv~------------------------s 142 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT-GLDAH--LDLLLS------------------------T 142 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC-CcHHH--CCEEEE------------------------e
Confidence 34689999999999999999999999999999899888886 77776 688888 8
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEeCCCchhhhccccccccCCccccCHHHHH
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 334 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~-v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 334 (344)
++++..||+|++|..+++++|++|++|+||||+..|+++|+++||.+ ++|.++....+. .+....+ +++++.
T Consensus 143 ~~~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~--~~~~~~~-----~~~~~~ 215 (224)
T PRK14988 143 HTFGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAE--KQYQRHP-----SLNDYR 215 (224)
T ss_pred eeCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccc--hhccCCC-----cHHHHH
Confidence 88889999999999999999999999999999999999999999985 667665543222 2222333 356666
Q ss_pred HHHHHhh
Q 019226 335 LLLQNVV 341 (344)
Q Consensus 335 ~ll~~~~ 341 (344)
++++.++
T Consensus 216 ~~~~~l~ 222 (224)
T PRK14988 216 RLIPSLM 222 (224)
T ss_pred HHhhhhc
Confidence 6666554
No 32
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.93 E-value=1.4e-24 Score=212.38 Aligned_cols=216 Identities=19% Similarity=0.295 Sum_probs=154.2
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCC-hHHHHHHHHhhCCChhhHHHHH-HHcCCCCc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD-PEFYDVLQNQIGGGKPKMRWYF-KEHGWPSS 141 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~ 141 (344)
.+|+++|+||+||||+|+...+.++|++++.+++.... |. ....+.+....|.........+ ...+
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~--------~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~---- 305 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQL--------WDTVTPIDKYREIMGVPLPKVWEALLPDHS---- 305 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcc--------cCCCCCHHHHHHHcCCChHHHHHHHhhhcc----
Confidence 35789999999999999999999999999998742100 00 0002345555665554432222 1111
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
....+.+...+.+.+.+.+......++||+.++|+.|+++|++++|+||+....++..++.+ ++..
T Consensus 306 -------------~~~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~-~l~~ 371 (459)
T PRK06698 306 -------------LEIREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY-DLDQ 371 (459)
T ss_pred -------------hhHHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC-CcHh
Confidence 01122333344444444433345689999999999999999999999999999999999986 7777
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
+ |+.+++ ++++. .||+|++|..++++++ +++|++|||+.+|+++|+++||.
T Consensus 372 ~--f~~i~~------------------------~d~v~-~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~ 422 (459)
T PRK06698 372 W--VTETFS------------------------IEQIN-SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLI 422 (459)
T ss_pred h--cceeEe------------------------cCCCC-CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCe
Confidence 6 688887 77764 4788899999999875 68999999999999999999999
Q ss_pred EEEEeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 302 CVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 302 ~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
+|++.++....+.+..+++++.+ +.+|.+++..
T Consensus 423 ~I~v~~~~~~~~~~~~~d~~i~~-----l~el~~~l~~ 455 (459)
T PRK06698 423 AIGCNFDFAQEDELAQADIVIDD-----LLELKGILST 455 (459)
T ss_pred EEEEeCCCCcccccCCCCEEeCC-----HHHHHHHHHH
Confidence 99998876554444445555544 4555555543
No 33
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.92 E-value=3e-24 Score=181.92 Aligned_cols=174 Identities=26% Similarity=0.487 Sum_probs=133.5
Q ss_pred EEEecCccccccchhHHHHHHHH-HHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccccCCC
Q 019226 70 LIFDCDGVIIESEHLHRQAYNDA-FSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIFDNP 147 (344)
Q Consensus 70 viFD~DGTL~d~~~~~~~a~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~ 147 (344)
|+||+||||+++...+.+++... +++++.+.. .+.++...+..... +..++..++..
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 59 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEIS-------------AEELRELFGKSYEEALERLLERFGID-------- 59 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHH-------------HHHHHHHTTSHHHHHHHHHHHHHHHH--------
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCC-------------HHHHHHHhCCCHHHHHHHhhhccchh--------
Confidence 79999999999998888888874 667776421 23344444333332 22333332210
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccce
Q 019226 148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227 (344)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~ 227 (344)
.....+.+.+........++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.
T Consensus 60 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~-~~~~~--f~~ 122 (176)
T PF13419_consen 60 --------------PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL-GLDDY--FDE 122 (176)
T ss_dssp --------------HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT-THGGG--CSE
T ss_pred --------------HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeecCCccccccccccc-ccccc--ccc
Confidence 1112222222222245799999999999999999999999999999999999997 77765 688
Q ss_pred eecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 228 FLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
+++ +++.+..||++++|+.+++++|++|++|+||||+..|+++|+++||.+|+|
T Consensus 123 i~~------------------------~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 123 IIS------------------------SDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEE------------------------GGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ccc------------------------cchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 888 888999999999999999999999999999999999999999999999986
No 34
>PLN02811 hydrolase
Probab=99.92 E-value=1.5e-23 Score=185.68 Aligned_cols=204 Identities=23% Similarity=0.365 Sum_probs=149.6
Q ss_pred cCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCccccCCCCCCch
Q 019226 74 CDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDNPPVTDD 152 (344)
Q Consensus 74 ~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~ 152 (344)
|||||+|+...+..+|.+++.++|++.+. +.+....|...... ..+....+.+.. .
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~----------~ 57 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDW-------------SLKAKMMGKKAIEAARIFVEESGLSDS----------L 57 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCH-------------HHHHHccCCCHHHHHHHHHHHhCCCCC----------C
Confidence 79999999999999999999999986321 23444556655543 334444454310 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeeccc
Q 019226 153 DQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADC 232 (344)
Q Consensus 153 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~ 232 (344)
..+.+.+ .+...+.... ....++||+.++|+.|+++|++++|+||.........+....++..+ |+.+++
T Consensus 58 ~~~~~~~----~~~~~~~~~~--~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~-- 127 (220)
T PLN02811 58 SPEDFLV----EREAMLQDLF--PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVT-- 127 (220)
T ss_pred CHHHHHH----HHHHHHHHHH--hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEE--
Confidence 1111111 1222222221 23678999999999999999999999999876454433333344444 678887
Q ss_pred chhhhhccCCcCCccccccccCCC--CCCCCCCCHHHHHHHHHHcC---CCCCcEEEEecCHhhHHHHHHcCCeEEEEeC
Q 019226 233 QSYVLMTNGTLMPNRVCVCAHQGD--DVKQKKPDPSIYVTAAKRLG---ISEKDCLVVEDSVIGLQAATRAGMACVITYT 307 (344)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~lg---v~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~ 307 (344)
++ +++.+||+|++|..+++++| +++++|+||||+..|+++|+++|+.+|++.+
T Consensus 128 ----------------------~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~ 185 (220)
T PLN02811 128 ----------------------GDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPD 185 (220)
T ss_pred ----------------------CChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeC
Confidence 77 78889999999999999997 9999999999999999999999999999988
Q ss_pred CCchhhhccccccccCCccccCHHH
Q 019226 308 SSTAEQDFKDAIAIYPDLSNVRLKD 332 (344)
Q Consensus 308 ~~~~~~~l~~~~~~~~~~~~~~~~~ 332 (344)
+......+..++.++.++.++...+
T Consensus 186 ~~~~~~~~~~~d~vi~~~~e~~~~~ 210 (220)
T PLN02811 186 PRLDKSYCKGADQVLSSLLDFKPEE 210 (220)
T ss_pred CCCcHhhhhchhhHhcCHhhCCHHH
Confidence 7655445567788999999888776
No 35
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.91 E-value=1.4e-23 Score=186.56 Aligned_cols=131 Identities=26% Similarity=0.384 Sum_probs=114.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.++++|++.++|+.|+.+ ++++++||+....+...++.+ |+..+ ||.++. ++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~-gl~~~--Fd~v~~------------------------s~ 148 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL-GLLDY--FDAVFI------------------------SE 148 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc-CChhh--hheEEE------------------------ec
Confidence 378999999999999999 999999999998999999997 67777 799998 99
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
+++..||+|++|+.+++++|++|++|+||||+. +|+.+|+++||++||++.+.... .... ..++...-++.+|.+
T Consensus 149 ~~g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~---~~~~-~~~~~~i~~l~~l~~ 224 (229)
T COG1011 149 DVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPL---PDAL-EAPDYEISSLAELLD 224 (229)
T ss_pred ccccCCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCC---CCCc-cCCceEEcCHHHHHH
Confidence 999999999999999999999999999999999 58899999999999998876543 1122 566777777788877
Q ss_pred HHHH
Q 019226 336 LLQN 339 (344)
Q Consensus 336 ll~~ 339 (344)
++..
T Consensus 225 ~~~~ 228 (229)
T COG1011 225 LLER 228 (229)
T ss_pred HHhh
Confidence 7754
No 36
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.91 E-value=1.8e-23 Score=183.96 Aligned_cols=112 Identities=21% Similarity=0.345 Sum_probs=93.0
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhh--HHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~--~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
...++||+.++|+.|+++|++++|+||+.... ....+... ++..+ |+.+++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~-~l~~~--fd~v~~------------------------ 144 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG-DIMAL--FDAVVE------------------------ 144 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh-hhHhh--CCEEEE------------------------
Confidence 46899999999999999999999999986543 22223222 44454 688887
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
+++++..||+|++|..+++++|++|++|+||||+..|+.+|+++||.+|++.++......|
T Consensus 145 s~~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~~~l 205 (211)
T TIGR02247 145 SCLEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDEEQAIHDL 205 (211)
T ss_pred eeecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHHHHH
Confidence 8888889999999999999999999999999999999999999999999987765544443
No 37
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.90 E-value=3.2e-22 Score=174.17 Aligned_cols=180 Identities=21% Similarity=0.206 Sum_probs=125.9
Q ss_pred cEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChh---------hHHHHHHHcCC
Q 019226 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP---------KMRWYFKEHGW 138 (344)
Q Consensus 68 k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~g~ 138 (344)
++|+|||||||+|+...+..+++++++++|..... .+.+....|.+.. .+..++.....
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 68 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVT------------HADIDHTKLAGNANNDWQLTHRLVVDGLNSASS 68 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHcCCCCC------------HHHHHHHHHccCccCchHHHHHHHHHhhhcccc
Confidence 47999999999999999999999999999743222 1234444443321 11122211100
Q ss_pred CCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHH--------HhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHH
Q 019226 139 PSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII--------KSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI 210 (344)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~ 210 (344)
. ....+...+. +.+.+.+.|.... ......+.+++.++|+.|+++|++++|+||+....++
T Consensus 69 ------~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~ 137 (197)
T TIGR01548 69 ------E-RVRDAPTLEA----VTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAA 137 (197)
T ss_pred ------h-hccCCccHHH----HHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHH
Confidence 0 0001122222 2233333332210 0011245566799999999999999999999999999
Q ss_pred HHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 019226 211 LCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 290 (344)
Q Consensus 211 ~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~ 290 (344)
..++.+ ++..+ |+.+++ ++++.. ||+|++|..+++++|+++++|++|||+.+
T Consensus 138 ~~l~~~-gl~~~--f~~~~~------------------------~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~ 189 (197)
T TIGR01548 138 KFLTTH-GLEIL--FPVQIW------------------------MEDCPP-KPNPEPLILAAKALGVEACHAAMVGDTVD 189 (197)
T ss_pred HHHHHc-Cchhh--CCEEEe------------------------ecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeCCHH
Confidence 999997 78777 688887 788776 99999999999999999999999999999
Q ss_pred hHHHHHHc
Q 019226 291 GLQAATRA 298 (344)
Q Consensus 291 Di~~a~~a 298 (344)
|+++|+++
T Consensus 190 Di~aA~~a 197 (197)
T TIGR01548 190 DIITGRKA 197 (197)
T ss_pred HHHHHHhC
Confidence 99999875
No 38
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.89 E-value=1.3e-22 Score=174.73 Aligned_cols=99 Identities=22% Similarity=0.408 Sum_probs=89.5
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...++||+.++|+.|+ ++++|+||+....+...++.+ ++..+ |+.+++ ++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~-gl~~~--fd~i~~------------------------~~ 131 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL-GIEDC--FDGIFC------------------------FD 131 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc-CcHhh--hCeEEE------------------------ee
Confidence 3579999999999998 579999999999999999997 77766 688888 77
Q ss_pred CCCC----CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 257 DVKQ----KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 257 ~~~~----~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
+++. .||+|++|..+++++|++|++|+||||+..|+++|+++|+.+|+|
T Consensus 132 ~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 132 TANPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred cccCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 7765 599999999999999999999999999999999999999999875
No 39
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.89 E-value=1.6e-21 Score=170.10 Aligned_cols=212 Identities=27% Similarity=0.383 Sum_probs=155.2
Q ss_pred CCCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHH-HcCCCCc
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFK-EHGWPSS 141 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~ 141 (344)
....+.+++||+||||+|++..+.++|+.++.++|...+. +......|....+..+.+- ....+.
T Consensus 6 ~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~-------------~~~~~~mG~~~~eaa~~~~~~~~dp~- 71 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPW-------------DVKVKSMGKRTSEAARLFVKKLPDPV- 71 (222)
T ss_pred cccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChH-------------HHHHHHcCCCHHHHHHHHHhhcCCCC-
Confidence 3456889999999999999999999999999999984332 2344456666666555443 333332
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
..++...+. .+.....+ ....+.||+..+++.|+.+|++++++|+.++...+....++.++-.
T Consensus 72 -----------s~ee~~~e~----~~~~~~~~--~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~ 134 (222)
T KOG2914|consen 72 -----------SREEFNKEE----EEILDRLF--MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK 134 (222)
T ss_pred -----------CHHHHHHHH----HHHHHHhc--cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH
Confidence 222222222 22222222 3468999999999999999999999999999989988888744444
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCC
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~-~~~i~vGDs~~Di~~a~~aG~ 300 (344)
+ |+..+.. .+.++..+||+|++|..+++.+|.++ ++|++|+|++..+++|++|||
T Consensus 135 ~--f~~~v~~----------------------d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm 190 (222)
T KOG2914|consen 135 N--FSHVVLG----------------------DDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGM 190 (222)
T ss_pred h--cCCCeec----------------------CCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCC
Confidence 3 3333320 16778889999999999999999998 999999999999999999999
Q ss_pred eEEEEeCCCchhhhccccccccCCccccC
Q 019226 301 ACVITYTSSTAEQDFKDAIAIYPDLSNVR 329 (344)
Q Consensus 301 ~~v~v~~~~~~~~~l~~~~~~~~~~~~~~ 329 (344)
.+|++.+.......-..+..++.++.+.+
T Consensus 191 ~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 191 QVVGVATPDLSNLFSAGATLILESLEDFK 219 (222)
T ss_pred eEEEecCCCcchhhhhccceecccccccC
Confidence 99999885443333344556666655544
No 40
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.89 E-value=9.9e-22 Score=168.48 Aligned_cols=100 Identities=37% Similarity=0.707 Sum_probs=90.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+.... .....++ ++..+ |+.+++ +++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~-~l~~~--f~~i~~------------------------~~~ 135 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL-GLRDL--FDVVIF------------------------SGD 135 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc-CCHHH--CCEEEE------------------------cCC
Confidence 5899999999999999999999999999887 5555554 77666 688888 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
.+.+||+|++|..+++++|++|++|++|||+..|+++|+++|+.+|+|
T Consensus 136 ~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 136 VGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 889999999999999999999999999999999999999999999875
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.88 E-value=1.4e-21 Score=170.52 Aligned_cols=112 Identities=22% Similarity=0.377 Sum_probs=96.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++|+||+........+....++..+ |+.+++ +++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~------------------------s~~ 136 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYL------------------------SQD 136 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEE------------------------ecc
Confidence 368999999999999999999999999887666555443355555 688888 899
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
++..||+|++|..+++++|++|++|+||||+..|+++|+++||.++++.++....+.|
T Consensus 137 ~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l 194 (199)
T PRK09456 137 LGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQTIPDYF 194 (199)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHH
Confidence 9999999999999999999999999999999999999999999999998766554433
No 42
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.88 E-value=9.6e-22 Score=171.14 Aligned_cols=189 Identities=13% Similarity=0.194 Sum_probs=120.8
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccccC
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (344)
|+|+|+|||||||+|+. .++.++++++|++. +++...++....... ...++.
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~---------------~~~~~~~g~~~~~~~--~~~~~~------- 52 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT---------------DHILKMIQDERFRDP--GELFGC------- 52 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhcCCCH---------------HHHHHHHhHhhhcCH--HHHhcc-------
Confidence 47999999999999943 45677788888742 233333333221111 111110
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc--
Q 019226 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE-- 223 (344)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~-- 223 (344)
+.+... +.+..+....+. ....++||+.++|+.|++. ++++++||.........++.+ ++..+.
T Consensus 53 ----~~~~~~---~~~~~~~~~~~~-----~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~-~l~~~f~~ 118 (197)
T PHA02597 53 ----DQELAK---KLIEKYNNSDFI-----RYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQF-NLNALFPG 118 (197)
T ss_pred ----cHHHHH---HHhhhhhHHHHH-----HhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhC-CHHHhCCC
Confidence 011111 111111111111 2357999999999999997 568888997766555556565 555442
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc--CCe
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA--GMA 301 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a--G~~ 301 (344)
-|+.+++ +++ .||+|++|..+++++| +++|+||||+..|+++|++| ||+
T Consensus 119 ~f~~i~~------------------------~~~---~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 119 AFSEVLM------------------------CGH---DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred cccEEEE------------------------ecc---CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 1344554 444 3678999999999999 89999999999999999999 999
Q ss_pred EEEEeCCCchhhhccccccccCCccc
Q 019226 302 CVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 302 ~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
+|+++++.. +..+.+.+.+.++.+
T Consensus 170 ~i~~~~~~~--~~~~~~~~~~~~~~~ 193 (197)
T PHA02597 170 VIHMLRGER--DHIPKLAHRVKSWND 193 (197)
T ss_pred EEEecchhh--ccccchhhhhccHHH
Confidence 999988854 222333455554443
No 43
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.88 E-value=1.1e-21 Score=163.98 Aligned_cols=154 Identities=24% Similarity=0.448 Sum_probs=116.9
Q ss_pred EEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccccCCCC
Q 019226 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPP 148 (344)
Q Consensus 69 ~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 148 (344)
+|+||+||||+|+...+..+|+++++++|.. .+.+....|.....+.++...
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~g~~~~~~~~~~~~------------- 52 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGED---------------FQALKALRGLAEELLYRIATS------------- 52 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhccc---------------HHHHHHHHccChHHHHHHHHH-------------
Confidence 4899999999999999999999999988752 122333333222122111110
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccccee
Q 019226 149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228 (344)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~ 228 (344)
.+.+.. |. .....+||+.++|+.|+++|++++++||+....+...++.+ +..+ |+.+
T Consensus 53 ---------~~~~~~-----~~-----~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~~~--f~~i 109 (154)
T TIGR01549 53 ---------FEELLG-----YD-----AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LGDY--FDLI 109 (154)
T ss_pred ---------HHHHhC-----cc-----hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HHhc--CcEE
Confidence 011110 11 23467799999999999999999999999999999888875 3444 5777
Q ss_pred ecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 019226 229 LADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG 299 (344)
++ +++.+ .||+|++|..+++++|+++ +|+||||+..|+++|+++|
T Consensus 110 ~~------------------------~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 110 LG------------------------SDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred Ee------------------------cCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 77 77887 9999999999999999999 9999999999999999987
No 44
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.88 E-value=1.8e-22 Score=176.53 Aligned_cols=207 Identities=19% Similarity=0.288 Sum_probs=139.7
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcc-
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST- 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~- 142 (344)
.+.+++|+||++|||+.......+.|..+.+.+|++++.+. +...+......+.+....+|.-...
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~-------------~~~~~~~~~~~~~~~~p~~~~~~g~l 70 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSL-------------IETIFRKDFKKMSEKGPFFGLYSGEL 70 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHH-------------HhHhhhHHHHhhcccCCcccccCCcc
Confidence 46799999999999999888888999999999999865421 1111111111111111111100000
Q ss_pred ---------ccCCC-CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHH
Q 019226 143 ---------IFDNP-PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (344)
Q Consensus 143 ---------~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~ 212 (344)
+.... ....+..+++.+.+. ...|.... ...+...+++.++++.||.+|+.++++||.+.. .+..
T Consensus 71 ~~~~ww~~lv~~~f~~~~~~~~~~~~~~~~---~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~ 145 (237)
T KOG3085|consen 71 TLSQWWPKLVESTFGKAGIDYEEELLENFS---FRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLL 145 (237)
T ss_pred cHHHHHHHHHHHHhccccchhHHHHHhhhh---hheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHH
Confidence 00000 000011111111111 11122111 135778899999999999999999999999987 4456
Q ss_pred HHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hh
Q 019226 213 LENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IG 291 (344)
Q Consensus 213 l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~D 291 (344)
+..+ ++..+ ||.++. |++++..||+|++|+.+++++|+.|++|+||||+. ||
T Consensus 146 l~~~-~l~~~--fD~vv~------------------------S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD 198 (237)
T KOG3085|consen 146 LLPL-GLSAY--FDFVVE------------------------SCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLEND 198 (237)
T ss_pred hhcc-CHHHh--hhhhhh------------------------hhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccc
Confidence 6664 77666 799998 99999999999999999999999999999999999 69
Q ss_pred HHHHHHcCCeEEEEeCCCchhhhc
Q 019226 292 LQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 292 i~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
+++|+++||+++.|.+.......+
T Consensus 199 ~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 199 YEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred cHhHHHcCCEEEEEccccchhhhh
Confidence 999999999999988766544333
No 45
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.84 E-value=8.9e-20 Score=161.30 Aligned_cols=110 Identities=20% Similarity=0.239 Sum_probs=84.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++|+||+....++.+++.+ ++..+ ++..+. ..+|.+ +......
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-~i~~~--~~~~~~-------~~~~~~-------~~~~~~~ 146 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL-GLDAA--FANRLE-------VEDGKL-------TGLVEGP 146 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCce--EeeEEE-------EECCEE-------EEEecCc
Confidence 579999999999999999999999999999999999886 66554 222211 001110 0000112
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...++|++.+|+.+++++++++++|+||||+.+|+++|+++|+..++
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~ 193 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF 193 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence 23357899999999999999999999999999999999999998654
No 46
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.84 E-value=1e-20 Score=161.41 Aligned_cols=166 Identities=19% Similarity=0.309 Sum_probs=115.5
Q ss_pred EEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCCh-HHHHHHH-HhhCCChh-------hHHHHHHHcCCC
Q 019226 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDP-EFYDVLQ-NQIGGGKP-------KMRWYFKEHGWP 139 (344)
Q Consensus 69 ~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~-------~~~~~~~~~g~~ 139 (344)
+|+||+||||+|+...+.+++.+++.+.+..... |.. .....+. ...+.... ....+...+|.+
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 73 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDL-------WRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLD 73 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHH-------HHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999989988887765421000 111 1111111 12221111 233344444443
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
.. .+ ..+.+.+.| ..+.++||+.++|+ +++|+||+....+...++++ ++
T Consensus 74 ~~---------~~--------~~~~~~~~~------~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~-~l 122 (175)
T TIGR01493 74 AE---------PK--------YGERLRDAY------KNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQA-GL 122 (175)
T ss_pred CC---------HH--------HHHHHHHHH------hcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC-CC
Confidence 11 00 111111112 23579999999998 37899999999999999997 77
Q ss_pred chhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 019226 220 ERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 220 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a 298 (344)
..+ |+.+++ +++++..||+|++|..+++++|++|++|+||||+.+|+.+|+++
T Consensus 123 ~~~--fd~v~~------------------------~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 123 PWY--FDRAFS------------------------VDTVRAYKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHH--Hhhhcc------------------------HhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 777 687887 88888999999999999999999999999999999999999864
No 47
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.82 E-value=5.6e-20 Score=152.54 Aligned_cols=106 Identities=32% Similarity=0.495 Sum_probs=83.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh---------------hhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---------------~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
+.++||+.++|+.|+++|++++|+||... ..+...++.+ ++... ..++.
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~---~~~~~------------ 89 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL-GVAVD---GVLFC------------ 89 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC-CCcee---EEEEC------------
Confidence 47899999999999999999999999874 3344555554 43311 11221
Q ss_pred cCCccccccccC-CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 243 LMPNRVCVCAHQ-GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 243 ~~~~~~~~~~~~-~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
... +++.+..||+|++|+.+++++|+++++|+||||+..|+++|+++||.+||++.+
T Consensus 90 ---------~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 90 ---------PHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred ---------CCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 000 344566799999999999999999999999999999999999999999999764
No 48
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.82 E-value=3.8e-19 Score=156.53 Aligned_cols=122 Identities=20% Similarity=0.245 Sum_probs=95.3
Q ss_pred HHHHHH-HHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhh--ccchhcccceeecccchh
Q 019226 159 DLIQDW-KTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI--GMERFEGLDCFLADCQSY 235 (344)
Q Consensus 159 ~~l~~~-~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~--~~~~~~~~d~~~~~~~~~ 235 (344)
+.|+.. +.+.|... .....++||+.++|++|+++|++++|+||+.....+..+++.. ++..+ ++.++.
T Consensus 76 k~lqg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--f~~~fd----- 146 (220)
T TIGR01691 76 KTLQGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--FSGYFD----- 146 (220)
T ss_pred HHHHHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--cceEEE-----
Confidence 444444 44444432 2235799999999999999999999999999887777776641 33333 444443
Q ss_pred hhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 236 VLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
. ..+ .||+|++|..+++++|++|++|+||||+..|+++|+++||.++++.++..
T Consensus 147 -------------------~-~~g-~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 147 -------------------T-TVG-LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred -------------------e-Ccc-cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 1 122 69999999999999999999999999999999999999999999987764
No 49
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.82 E-value=3.7e-19 Score=152.87 Aligned_cols=109 Identities=30% Similarity=0.440 Sum_probs=84.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh---------------hhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---------------~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
+.++||+.++|+.|+++|++++|+||... ..+...++.+ ++ .++.++.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~----~f~~i~~------------ 90 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR-GG----RLDGIYY------------ 90 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CC----ccceEEE------------
Confidence 57999999999999999999999999863 1122233332 22 1344332
Q ss_pred cCCccccccccC-CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 243 LMPNRVCVCAHQ-GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 243 ~~~~~~~~~~~~-~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
|.+. +++.+..||+|++|..+++++|+++++|+||||+.+|+++|+++|+.++++.++...
T Consensus 91 --------~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~ 152 (181)
T PRK08942 91 --------CPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGV 152 (181)
T ss_pred --------CCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCc
Confidence 1111 345677999999999999999999999999999999999999999999999876543
No 50
>PLN02954 phosphoserine phosphatase
Probab=99.82 E-value=7.1e-19 Score=156.10 Aligned_cols=213 Identities=15% Similarity=0.170 Sum_probs=126.1
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHH-cCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~ 142 (344)
.+++|+|+||+||||+++ +.+.++++++|.+.. ..+.++...++ ...+.+.+.. .+...
T Consensus 9 ~~~~k~viFDfDGTL~~~-----~~~~~~~~~~g~~~~------------~~~~~~~~~~g-~~~~~~~~~~~~~~~~-- 68 (224)
T PLN02954 9 WRSADAVCFDVDSTVCVD-----EGIDELAEFCGAGEA------------VAEWTAKAMGG-SVPFEEALAARLSLFK-- 68 (224)
T ss_pred HccCCEEEEeCCCcccch-----HHHHHHHHHcCChHH------------HHHHHHHHHCC-CCCHHHHHHHHHHHcC--
Confidence 366899999999999996 445777888886411 11222222332 2233333322 21100
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
.. .+ ...+.+.. ....++||+.++|+.|+++|++++|+|++....++.+++.+ ++...
T Consensus 69 ---------~~----~~----~~~~~~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~-gi~~~ 126 (224)
T PLN02954 69 ---------PS----LS----QVEEFLEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL-GIPPE 126 (224)
T ss_pred ---------CC----HH----HHHHHHHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh-CCChh
Confidence 00 01 11111221 23578999999999999999999999999999999999986 66531
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
..+...+.+ -.+|. +.+....+.....+|+++.+..+++++|. ++|++|||+.+|+++++++|+.+
T Consensus 127 ~~~~~~~~~------~~~g~------~~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~ 192 (224)
T PLN02954 127 NIFANQILF------GDSGE------YAGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADL 192 (224)
T ss_pred hEEEeEEEE------cCCCc------EECccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCE
Confidence 112211110 00111 11000011122457788999999999885 69999999999999999989887
Q ss_pred EEEeCCCchhhhc-cccccccCCccccCHHHHHHHH
Q 019226 303 VITYTSSTAEQDF-KDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 303 v~v~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+...++....+.+ ..+++++.+ +.+|.+++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~-----~~el~~~~ 223 (224)
T PLN02954 193 FIGYGGVQVREAVAAKADWFVTD-----FQDLIEVL 223 (224)
T ss_pred EEecCCCccCHHHHhcCCEEECC-----HHHHHHhh
Confidence 6554433322222 234555544 44554443
No 51
>PRK06769 hypothetical protein; Validated
Probab=99.82 E-value=3.2e-19 Score=151.97 Aligned_cols=107 Identities=21% Similarity=0.343 Sum_probs=83.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhh--------HHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--------VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~--------~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
+.++||+.++|+.|+++|++++|+||..... ....++.. + ++.++.
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~-g------~~~~~~------------------- 80 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF-G------FDDIYL------------------- 80 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC-C------cCEEEE-------------------
Confidence 5789999999999999999999999986421 12223332 2 222221
Q ss_pred cccc-CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 250 VCAH-QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 250 ~~~~-~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
|.. .+++....||+|++|..++++++++|++|+||||+..|+++|+++|+.+|++.++...
T Consensus 81 -~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 81 -CPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred -CcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence 000 1555677999999999999999999999999999999999999999999999887643
No 52
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.81 E-value=5.6e-19 Score=153.83 Aligned_cols=114 Identities=17% Similarity=0.075 Sum_probs=84.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++|+||+....++.+++.+ ++..+ +...+.. -.+|...|... .
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-g~~~~--~~~~~~~------~~~g~~~p~~~--------~ 141 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL-NPDYV--YSNELVF------DEKGFIQPDGI--------V 141 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh-CCCeE--EEEEEEE------cCCCeEeccee--------e
Confidence 589999999999999999999999999999999999887 65554 2332220 01222211100 0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
....+++++.+..+++++|+++++|+||||+.+|+++|+.+|+.++....+
T Consensus 142 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 142 RVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred EEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 011244557899999999999999999999999999999999988764433
No 53
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.81 E-value=2.9e-19 Score=152.81 Aligned_cols=125 Identities=22% Similarity=0.288 Sum_probs=90.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChh---------------hHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKS---------------SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~---------------~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
+.++||+.++|+.|+++|++++|+||.... .....++.+ ++. ++.++.
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~----~~~i~~------------ 87 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER-DVD----LDGIYY------------ 87 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CCC----ccEEEE------------
Confidence 579999999999999999999999998851 111222221 111 233322
Q ss_pred cCCccccccccC-------CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEeCCCchhhh
Q 019226 243 LMPNRVCVCAHQ-------GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQD 314 (344)
Q Consensus 243 ~~~~~~~~~~~~-------~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~-v~v~~~~~~~~~ 314 (344)
|.+. +++...+||+|++|..+++++|+++++|+||||+..|+++|+++|+.+ +++.++......
T Consensus 88 --------~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~ 159 (176)
T TIGR00213 88 --------CPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPE 159 (176)
T ss_pred --------CCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCccccc
Confidence 1111 235667899999999999999999999999999999999999999998 788887653332
Q ss_pred c-cccccccCCccc
Q 019226 315 F-KDAIAIYPDLSN 327 (344)
Q Consensus 315 l-~~~~~~~~~~~~ 327 (344)
. ..+++++.++.+
T Consensus 160 ~~~~ad~~i~~~~e 173 (176)
T TIGR00213 160 AENIADWVLNSLAD 173 (176)
T ss_pred ccccCCEEeccHHH
Confidence 2 235566655443
No 54
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.80 E-value=2.2e-18 Score=160.01 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=99.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
.+++||+.++++.|++.|++++|+|++.....+...+.+ ++... +. +.+++.+|.+. ..+ ..+
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L-gld~~------~a---n~lei~dg~lt---g~v----~g~ 242 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL-RLDAA------VA---NELEIMDGKLT---GNV----LGD 242 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc-CCCeE------EE---eEEEEECCEEE---eEe----cCc
Confidence 689999999999999999999999999998888888776 54432 11 12222333320 000 123
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
...+|||++.+..+++++|+++++|++|||+.||+.|++.||+..++ +. .+.....+++.+. ...+..+..+|
T Consensus 243 iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nA---kp~Vk~~Ad~~i~---~~~l~~~l~~~ 315 (322)
T PRK11133 243 IVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HA---KPKVNEQAQVTIR---HADLMGVLCIL 315 (322)
T ss_pred cCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CC---CHHHHhhCCEEec---CcCHHHHHHHh
Confidence 34579999999999999999999999999999999999999999876 22 2223345566664 23446666665
Q ss_pred HH
Q 019226 338 QN 339 (344)
Q Consensus 338 ~~ 339 (344)
..
T Consensus 316 ~~ 317 (322)
T PRK11133 316 SG 317 (322)
T ss_pred cc
Confidence 43
No 55
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.77 E-value=2.1e-18 Score=140.35 Aligned_cols=98 Identities=33% Similarity=0.472 Sum_probs=82.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC--------hhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT--------KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~--------~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
..++||+.++|+.|+++|++++++||+. ...+...++.+ ++.. +..+.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~-~l~~----~~~~~------------------- 79 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL-GVPI----DVLYA------------------- 79 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC-CCCE----EEEEE-------------------
Confidence 3689999999999999999999999998 66677777775 5432 22323
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEec-CHhhHHHHHHcCCeEEEEe
Q 019226 250 VCAHQGDDVKQKKPDPSIYVTAAKRL-GISEKDCLVVED-SVIGLQAATRAGMACVITY 306 (344)
Q Consensus 250 ~~~~~~~~~~~~KP~~~~~~~~~~~l-gv~~~~~i~vGD-s~~Di~~a~~aG~~~v~v~ 306 (344)
.. ...||++++|..+++++ ++++++|+|||| +..|+++|+++|+.+|+++
T Consensus 80 -----~~--~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 80 -----CP--HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred -----CC--CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 22 46799999999999999 599999999999 6899999999999999985
No 56
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.77 E-value=1.2e-18 Score=147.31 Aligned_cols=108 Identities=14% Similarity=0.055 Sum_probs=93.5
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCC-ChhhHHHHHHHhhccc---------hhcccceeecccchhhhhccCCcCCc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAA-TKSSVILCLENLIGME---------RFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~-~~~~~~~~l~~l~~~~---------~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
...++||+.++|+.|+++|++++|+||+ ....++..++.+ ++. .+ |+.+++
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~-~l~~~~~~~~~~~~--Fd~iv~---------------- 103 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF-EITYAGKTVPMHSL--FDDRIE---------------- 103 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC-CcCCCCCcccHHHh--ceeeee----------------
Confidence 4689999999999999999999999998 777778888886 665 55 678777
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHc--CCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRL--GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~l--gv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
+++....||.+.+++.+.+.+ |++|++|+||||+..|+++|+++|+.++++.++...
T Consensus 104 --------~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~~ 162 (174)
T TIGR01685 104 --------IYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDK 162 (174)
T ss_pred --------ccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCccH
Confidence 777666788888888888887 899999999999999999999999999999877553
No 57
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.77 E-value=3.5e-18 Score=143.48 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=90.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC---------------hhhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~---------------~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
+.++||+.++|+.|+++|++++|+||.. ...+...++.+ ++. |+.++.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----fd~ii~------------ 90 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ-GII----FDDVLI------------ 90 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC-CCc----eeEEEE------------
Confidence 5899999999999999999999999963 23345555554 443 343332
Q ss_pred cCCcccccc-ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhh
Q 019226 243 LMPNRVCVC-AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD 314 (344)
Q Consensus 243 ~~~~~~~~~-~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~ 314 (344)
| .|.+++....||++++|..+++++++++++|+||||+.+|+++|+++||.++++.++..+.+.
T Consensus 91 --------~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~~~~~ 155 (161)
T TIGR01261 91 --------CPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEELNWDM 155 (161)
T ss_pred --------CCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhcCHHH
Confidence 1 112467778999999999999999999999999999999999999999999999888766544
No 58
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.76 E-value=6.4e-18 Score=149.56 Aligned_cols=101 Identities=20% Similarity=0.177 Sum_probs=78.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc-hhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+.|+++|++++|+||+....++.+++++ ... .+...+..+. ++
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~------------------------~~ 127 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFS------------------------GE 127 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEec------------------------CC
Confidence 689999999999999999999999999999999988885 211 1111122223 45
Q ss_pred CCCCCCCCHHH----------HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 257 DVKQKKPDPSI----------YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 257 ~~~~~KP~~~~----------~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
.....||+|.. +..++++++..+++|+||||+.+|+.+|++||+.++
T Consensus 128 ~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 128 YITITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred eeEEeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 55556776654 357889999999999999999999999999999443
No 59
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.76 E-value=1.6e-17 Score=140.70 Aligned_cols=189 Identities=19% Similarity=0.238 Sum_probs=134.0
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHH-----hcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCC
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFS-----HFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWP 139 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 139 (344)
..+++++||+|.||++....+..+.++-+. ++|++.+. ...+ ...+++++|.+
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~------------a~~L----------~~~~yk~YG~t 70 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEE------------AEEL----------RESLYKEYGLT 70 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhh------------hHHH----------HHHHHHHHhHH
Confidence 479999999999999988777666663333 35655332 1111 23455666665
Q ss_pred CccccCCCCCCc-hhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhc
Q 019226 140 SSTIFDNPPVTD-DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218 (344)
Q Consensus 140 ~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~ 218 (344)
...+...+...+ .+.. +...+....+.++|.+..+.+|-.|+.++ .++.||++..++.++++.+ |
T Consensus 71 ~aGL~~~~~~~d~deY~-----------~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L-G 136 (244)
T KOG3109|consen 71 MAGLKAVGYIFDADEYH-----------RFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL-G 136 (244)
T ss_pred HHHHHHhcccCCHHHHH-----------HHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh-C
Confidence 444333333221 1111 11111111233789999999999999875 8899999999999999998 8
Q ss_pred cchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHH
Q 019226 219 MERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATR 297 (344)
Q Consensus 219 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~Di~~a~~ 297 (344)
+.++ |+.++++ +.++| .+....+||.++.|+.+.+..|+. |++++||+||.++|+.|++
T Consensus 137 ieDc--Fegii~~---------e~~np---------~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~ 196 (244)
T KOG3109|consen 137 IEDC--FEGIICF---------ETLNP---------IEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKE 196 (244)
T ss_pred hHHh--ccceeEe---------eccCC---------CCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHh
Confidence 8887 6887772 11111 234456999999999999999998 9999999999999999999
Q ss_pred cCCeEEEEeCCC
Q 019226 298 AGMACVITYTSS 309 (344)
Q Consensus 298 aG~~~v~v~~~~ 309 (344)
.||.+|++....
T Consensus 197 vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 197 VGLKTVLVGREH 208 (244)
T ss_pred ccceeEEEEeee
Confidence 999999886544
No 60
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.74 E-value=1.3e-17 Score=152.96 Aligned_cols=123 Identities=13% Similarity=0.180 Sum_probs=88.9
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHH-HHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVI-LCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~-~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
-++++.++++.|+++|. ++|+||.+..... ..+.. .+...+ ++.+.. ...++..
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~--~~~i~~---------------------~~g~~~~ 198 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSL--VAAIET---------------------ASGRQPL 198 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHH--HHHHHH---------------------HhCCcee
Confidence 47899999999998887 7899998764321 11111 122222 222221 0013445
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhcc----------ccccccCCccc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----------DAIAIYPDLSN 327 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~----------~~~~~~~~~~~ 327 (344)
..+||+|.+|..+++++|+++++|+||||+. .|+++|+++||.+++|.+|....+.+. .++++++++.+
T Consensus 199 ~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~ 278 (279)
T TIGR01452 199 VVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLAD 278 (279)
T ss_pred ccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEeccccc
Confidence 5689999999999999999999999999996 899999999999999999988766553 35666666554
No 61
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.73 E-value=1.2e-16 Score=141.93 Aligned_cols=101 Identities=18% Similarity=0.163 Sum_probs=82.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCC----ChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAA----TKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA 252 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~----~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
...+.+++.++|+.|+++|++++++||. ....++.+++.+ ++..+ ++.++.
T Consensus 112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l-Gi~~~--f~~i~~---------------------- 166 (237)
T TIGR01672 112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF-HIPAM--NPVIFA---------------------- 166 (237)
T ss_pred CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh-CCchh--eeEEEC----------------------
Confidence 3467788999999999999999999998 555677777776 77665 566766
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
+++....||++. .+++++++ ++||||+.+|+.+|+++|+.++.+.++...
T Consensus 167 --~d~~~~~Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s 216 (237)
T TIGR01672 167 --GDKPGQYQYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASNS 216 (237)
T ss_pred --CCCCCCCCCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence 777766788875 35567776 799999999999999999999999877664
No 62
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.72 E-value=4.8e-16 Score=135.94 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=74.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++ ++++|+||+....++..++++ ++..+ +...+.+ .++|.+ . +.+
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~-gl~~~--f~~~~~~------~~~~~i------~----~~~ 126 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL-GWPTL--FCHSLEV------DEDGMI------T----GYD 126 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc-CCchh--hcceEEE------CCCCeE------E----Ccc
Confidence 67899999999999999 999999999999999999987 76655 2222220 001100 0 222
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
++.|.....++++++..+++|+||||+.+|+++++++|+.+.
T Consensus 127 ----~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~ 168 (205)
T PRK13582 127 ----LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL 168 (205)
T ss_pred ----ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence 233344456666777778999999999999999999999754
No 63
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.71 E-value=5.9e-17 Score=136.87 Aligned_cols=97 Identities=15% Similarity=0.210 Sum_probs=80.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChh------------hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKS------------SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~------------~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
.++||+.++|+.|+++|++++|+||.... .+...++++ ++. ++.++.
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~-gl~----~~~ii~---------------- 100 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL-KVP----IQVLAA---------------- 100 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc-CCC----EEEEEe----------------
Confidence 37899999999999999999999997753 345666665 442 134444
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEecCH--------hhHHHHHHcCCeEEE
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLG--ISEKDCLVVEDSV--------IGLQAATRAGMACVI 304 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg--v~~~~~i~vGDs~--------~Di~~a~~aG~~~v~ 304 (344)
+++....||+|++|..+++++| +++++|+||||+. .|+++|+++|+.+++
T Consensus 101 --------~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 101 --------THAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred --------cCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 4455568999999999999999 9999999999996 699999999999875
No 64
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.69 E-value=1.2e-16 Score=144.76 Aligned_cols=108 Identities=12% Similarity=0.107 Sum_probs=82.4
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
.++++.+.++.|++.+++++++||.+........... +...+ ++.+.. +.......
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~-g~g~~--~~~i~~---------------------~~~~~~~~ 176 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLAL-DVGPF--VTALEY---------------------ATDTKATV 176 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCC-CchHH--HHHHHH---------------------HhCCCcee
Confidence 3678888999999999999999998876554444332 44443 233322 00022233
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCch
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.+||+|.+|+.+++++|+++++|+||||+. +|+.+|+++||.+++|.++...
T Consensus 177 ~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~ 229 (257)
T TIGR01458 177 VGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYR 229 (257)
T ss_pred ecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCC
Confidence 479999999999999999999999999996 8999999999999999888643
No 65
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.68 E-value=3e-16 Score=141.43 Aligned_cols=99 Identities=21% Similarity=0.326 Sum_probs=73.3
Q ss_pred eecccchhhhhccCCcCCcccccc-----ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCe
Q 019226 228 FLADCQSYVLMTNGTLMPNRVCVC-----AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMA 301 (344)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~ 301 (344)
++..++|..-.+++.+.|....+. ....+.+..+||+|.+|+.+++++++++++|+||||+. .|+.+|+++||.
T Consensus 139 ~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~ 218 (249)
T TIGR01457 139 FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGID 218 (249)
T ss_pred EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCc
Confidence 344455555555555555444332 33345666789999999999999999999999999997 799999999999
Q ss_pred EEEEeCCCchhhhcc----ccccccCCcc
Q 019226 302 CVITYTSSTAEQDFK----DAIAIYPDLS 326 (344)
Q Consensus 302 ~v~v~~~~~~~~~l~----~~~~~~~~~~ 326 (344)
+++|.++....+++. .++++++++.
T Consensus 219 ~v~v~~G~~~~~~~~~~~~~pd~~v~~l~ 247 (249)
T TIGR01457 219 TLLVHTGVTKAEEVAGLPIAPTHVVSSLA 247 (249)
T ss_pred EEEEcCCCCCHHHHhcCCCCCCEEeCChh
Confidence 999999887655542 2455555544
No 66
>PRK10444 UMP phosphatase; Provisional
Probab=99.68 E-value=4.2e-16 Score=140.09 Aligned_cols=226 Identities=16% Similarity=0.190 Sum_probs=127.0
Q ss_pred ccEEEEecCccccccchhHHHH--HHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 67 LQALIFDCDGVIIESEHLHRQA--YNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
+|+++||+||||++....+..+ +.+.+.+.|.+....+ +........+.+.+...|++..
T Consensus 1 ~~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~T---------------n~~~~~~~~~~~~l~~~G~~~~--- 62 (248)
T PRK10444 1 IKNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLT---------------NYPSQTGQDLANRFATAGVDVP--- 62 (248)
T ss_pred CcEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEe---------------CCCCCCHHHHHHHHHHcCCCCC---
Confidence 5799999999999987544322 2333445666644322 1222223334455555665421
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeE-------EEEeCCChhhHHHHHHHhh
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKV-------AVCSAATKSSVILCLENLI 217 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v-------~ivTn~~~~~~~~~l~~l~ 217 (344)
+++.-.-.....++..+ . .......-|...+.+.|++.|+.+ +++. .+.......+....
T Consensus 63 ------~~~i~ts~~~~~~~L~~----~--~~~~v~~~g~~~l~~~l~~~g~~~~~~~~~~Vvvg-~~~~~~~~~l~~a~ 129 (248)
T PRK10444 63 ------DSVFYTSAMATADFLRR----Q--EGKKAYVIGEGALIHELYKAGFTITDINPDFVIVG-ETRSYNWDMMHKAA 129 (248)
T ss_pred ------HhhEecHHHHHHHHHHh----C--CCCEEEEEcCHHHHHHHHHCcCEecCCCCCEEEEe-CCCCCCHHHHHHHH
Confidence 11100001111111111 0 011123356677888888877763 2333 23322222222221
Q ss_pred ccchhcccceeecccchhhhhccCCcCCcccccc-----ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hh
Q 019226 218 GMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVC-----AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IG 291 (344)
Q Consensus 218 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~D 291 (344)
..-. . --.+++.++|. .. +.+.|.-..++ ....+....+||+|++|+.+++++++++++|+||||+. .|
T Consensus 130 ~~l~-~-g~~~i~~n~D~--~~-~g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tD 204 (248)
T PRK10444 130 YFVA-N-GARFIATNPDT--HG-RGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTD 204 (248)
T ss_pred HHHH-C-CCEEEEECCCC--CC-CCCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHH
Confidence 1001 1 12344434333 22 23555554433 22234455689999999999999999999999999997 79
Q ss_pred HHHHHHcCCeEEEEeCCCchhhhcc----ccccccCCcccc
Q 019226 292 LQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNV 328 (344)
Q Consensus 292 i~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~ 328 (344)
+.+|+++|+.+++|.++....+.+. .++++++++.++
T Consensus 205 i~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 205 ILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred HHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 9999999999999999988776664 355666665544
No 67
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.68 E-value=2.9e-15 Score=130.65 Aligned_cols=104 Identities=15% Similarity=0.125 Sum_probs=76.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhcc-CCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTN-GTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 256 (344)
++++||+.++++.|++.+ +++|+|++....++.+++.+ +++.+...+.. +++ |.+ ++.
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l-gi~~~~an~l~---------~~~~g~~----------tG~ 125 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL-GFPTLLCHKLE---------IDDSDRV----------VGY 125 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc-CCchhhceeeE---------EecCCee----------ECe
Confidence 589999999999999985 99999999999999999987 76655222222 222 222 022
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEe
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~ 306 (344)
.. ..+|.+..+...+++.+. +|++|||+.||+.|++.+|...++..
T Consensus 126 ~~-~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~a 171 (203)
T TIGR02137 126 QL-RQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHA 171 (203)
T ss_pred ee-cCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecC
Confidence 22 345555555555566663 89999999999999999999987644
No 68
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.67 E-value=8.4e-16 Score=130.55 Aligned_cols=101 Identities=21% Similarity=0.316 Sum_probs=82.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC-hhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT-KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~-~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+.|+++|++++++||+. ...+...++.+ ++. .. .
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~-gl~--------~~------------------------~- 87 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL-GIP--------VL------------------------P- 87 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc-CCE--------EE------------------------c-
Confidence 3678999999999999999999999998 45444444432 211 11 1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhh
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQD 314 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~ 314 (344)
...||+|++|..+++++|+++++|+||||+. .|+++|+++||.+|++.++....+.
T Consensus 88 --~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~ 144 (170)
T TIGR01668 88 --HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQW 144 (170)
T ss_pred --CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCccc
Confidence 2369999999999999999999999999998 6999999999999999988765543
No 69
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.66 E-value=6.6e-16 Score=124.87 Aligned_cols=117 Identities=27% Similarity=0.426 Sum_probs=87.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..+++++.++|+.|+++|++++++||+....++..++.+ ++..+ ++.++..........++.. ......
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~-~~~~~--~~~i~~~~~~~~~~~~~~~--------~~~~~~ 91 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL-GLDDY--FDPVITSNGAAIYYPKEGL--------FLGGGP 91 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc-CCchh--hhheeccchhhhhcccccc--------cccccc
Confidence 689999999999999999999999999999999999886 55433 3545441000000000000 001223
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
+..+||++..+..+.++++..++++++|||+.+|+++++++|+.++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 92 FDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred cccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 334599999999999999999999999999999999999999999874
No 70
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.65 E-value=3.7e-15 Score=131.45 Aligned_cols=99 Identities=19% Similarity=0.221 Sum_probs=76.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++++.|+++|++++|+|++....++.+++.+.....+...+..+. ++.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~------------------------~~~ 124 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFS------------------------NEY 124 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEee------------------------CCe
Confidence 68999999999999999999999999999989988887622222111122222 344
Q ss_pred CCCCCCCHHHH----------HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 258 VKQKKPDPSIY----------VTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 258 ~~~~KP~~~~~----------~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
....||++..+ ..++++++..+++|+||||+.+|+.+|+.||+
T Consensus 125 ~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 125 IHIDWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred eEEeCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 44566766654 46777777788999999999999999999998
No 71
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.65 E-value=6.1e-15 Score=129.30 Aligned_cols=110 Identities=23% Similarity=0.261 Sum_probs=86.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++++.++++|++++|+|++....++.+.+.+ +++..... .+.+.||.+- ......
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l-g~d~~~an---------~l~~~dG~lt-------G~v~g~ 138 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL-GIDYVVAN---------ELEIDDGKLT-------GRVVGP 138 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh-CCchheee---------EEEEeCCEEe-------ceeeee
Confidence 689999999999999999999999999999999999997 76665322 2223343220 000222
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...++-+......+++++|+++++++++||+.||+.|...+|...++
T Consensus 139 ~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 139 ICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred ecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 33345578889999999999999999999999999999999999764
No 72
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.64 E-value=2.3e-15 Score=135.20 Aligned_cols=244 Identities=20% Similarity=0.229 Sum_probs=149.4
Q ss_pred CCCCccEEEEecCccccccchhHHHH--HHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHH-cCCC
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQA--YNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWP 139 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 139 (344)
.+..+++++||+||||++....+..+ +.+.+.+.|++... +.+........+...+.. .+.+
T Consensus 4 ~~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~if---------------lTNn~~~s~~~~~~~L~~~~~~~ 68 (269)
T COG0647 4 VMDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIF---------------LTNNSTRSREVVAARLSSLGGVD 68 (269)
T ss_pred hhhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEE---------------EeCCCCCCHHHHHHHHHhhcCCC
Confidence 35679999999999999988766443 44455567776543 333344444445555555 2321
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeC----------CChhhH
Q 019226 140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSA----------ATKSSV 209 (344)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn----------~~~~~~ 209 (344)
.. .++.-.-.....++..+.+. ..-...=|...+.+.|+..|+.+.-..+ .++...
T Consensus 69 ~~---------~~~i~TS~~at~~~l~~~~~-----~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~ 134 (269)
T COG0647 69 VT---------PDDIVTSGDATADYLAKQKP-----GKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLT 134 (269)
T ss_pred CC---------HHHeecHHHHHHHHHHhhCC-----CCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCC
Confidence 10 11111101111222221111 0112334666777888888765433222 222222
Q ss_pred HHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccc-----ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 019226 210 ILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVC-----AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLV 284 (344)
Q Consensus 210 ~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~ 284 (344)
.+.+......-. .+ -.+++.++|..-.+++.+.|...-++ +........+||++.+|+.+++.++.++++|+|
T Consensus 135 ~e~l~~a~~~i~-~g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~m 212 (269)
T COG0647 135 YEKLAEALLAIA-AG-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLM 212 (269)
T ss_pred HHHHHHHHHHHH-cC-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEE
Confidence 233332212111 11 45677788988888888988877665 222233467999999999999999999999999
Q ss_pred EecCHh-hHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 285 VEDSVI-GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 285 vGDs~~-Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
|||+.. ||.+|.++||.+++|.+|....+++... ...|++..-++.++...+.
T Consensus 213 VGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~-~~~p~~v~~sl~~~~~~~~ 266 (269)
T COG0647 213 VGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRA-EVKPTYVVDSLAELITALK 266 (269)
T ss_pred EcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhh-ccCCcchHhhHHHHHhhhh
Confidence 999995 9999999999999999999977665432 3455555555555555443
No 73
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.62 E-value=1.7e-14 Score=125.87 Aligned_cols=112 Identities=18% Similarity=0.134 Sum_probs=84.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++++.++++|++++|+|++....++.+++.+ +++.+...+..+. .||.+. ....+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l-g~~~~~~~~l~~~--------~~g~~~-------g~~~~~ 149 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL-GIDNAIGTRLEES--------EDGIYT-------GNIDGN 149 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc-CCcceEecceEEc--------CCCEEe-------CCccCC
Confidence 478999999999999999999999999999999998886 6655422211211 122110 000112
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
...++++...++.++++.++++++|+++||+.+|+++++.+|..++..
T Consensus 150 ~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 150 NCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 334677888899999999999999999999999999999999987653
No 74
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.61 E-value=2.8e-14 Score=122.68 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=79.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhc-cCCcCCccccccccC--
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAHQ-- 254 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 254 (344)
..++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.+++ +-.... +|.+ .+-++.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~i~~---~~~~~~~~g~~-----~~~~~~~~ 139 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI-GEKDV--FIEIYS---NPASFDNDGRH-----IVWPHHCH 139 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc-CChhh--eeEEec---cCceECCCCcE-----EEecCCCC
Confidence 589999999999999999999999999999999999886 66665 566665 111111 1111 000100
Q ss_pred -CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 255 -GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 255 -~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
......+.+|+++++.+.++. +++|+||||+.+|+.+|+++++-+
T Consensus 140 ~~~~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 140 GCCSCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred ccCcCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 012223455688888887765 799999999999999999986643
No 75
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.60 E-value=9.1e-15 Score=136.77 Aligned_cols=109 Identities=19% Similarity=0.314 Sum_probs=84.1
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC---------------hhhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~---------------~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
..++||+.++|+.|+++|++++|+||.+ ...+...++.+ ++. ++.++.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~-gl~----fd~i~i------------ 91 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQ-GIK----FDEVLI------------ 91 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHc-CCc----eeeEEE------------
Confidence 5899999999999999999999999952 22233334443 321 233322
Q ss_pred cCCcccccccc-CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 243 LMPNRVCVCAH-QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 243 ~~~~~~~~~~~-~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
|++ .+++...+||+|.++..+++++++++++++||||+.+|+++|+++||.+|+++.....
T Consensus 92 --------~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~~~ 153 (354)
T PRK05446 92 --------CPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARETLN 153 (354)
T ss_pred --------eCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCCCC
Confidence 111 1356677899999999999999999999999999999999999999999999665443
No 76
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.58 E-value=3.7e-14 Score=120.89 Aligned_cols=106 Identities=24% Similarity=0.215 Sum_probs=78.4
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCccccccccCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 255 (344)
.+.++||+.++++.++++|++++|+|++....++..++.+ ++..+. ...+. + +||.+. +.+.+
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~-g~~~~~--~~~~~-------~~~~g~~~------g~~~~ 134 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL-GIDDVF--ANRLE-------FDDNGLLT------GPIEG 134 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCchhe--eeeEE-------ECCCCEEe------CccCC
Confidence 3578999999999999999999999999999999999887 665542 22222 1 122210 00011
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a 298 (344)
.....+..|...+..+++++|+++++|++|||+.+|+.|++.+
T Consensus 135 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 135 QVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 1223355667889999999999999999999999999998764
No 77
>PLN02645 phosphoglycolate phosphatase
Probab=99.57 E-value=4e-14 Score=131.74 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=62.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccc-cccccCCccccCHHHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKD-AIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~l 336 (344)
..+||+|.+|..+++++++++++|+||||+. +|+.+|+++||.+++|.++....+++.. .....|++..-++.+|.++
T Consensus 227 ~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~ 306 (311)
T PLN02645 227 VVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTL 306 (311)
T ss_pred cCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHH
Confidence 3479999999999999999999999999997 8999999999999999988876655432 1123355554555666655
Q ss_pred HH
Q 019226 337 LQ 338 (344)
Q Consensus 337 l~ 338 (344)
++
T Consensus 307 ~~ 308 (311)
T PLN02645 307 KA 308 (311)
T ss_pred hh
Confidence 54
No 78
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.57 E-value=1.7e-14 Score=133.64 Aligned_cols=104 Identities=21% Similarity=0.201 Sum_probs=91.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch-hcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+.|+++|++++++||......+..++++ ++.. + |+.+++ .+
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l-~~~~~~--f~~i~~------------------------~~ 238 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL-RQTDIW--FDDLIG------------------------RP 238 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH-HHcCCc--hhhhhC------------------------Cc
Confidence 478999999999999999999999999999999999997 5554 3 566655 44
Q ss_pred -------CCCCCCCCHHHHHHHHHHcCC-CCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 257 -------DVKQKKPDPSIYVTAAKRLGI-SEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 257 -------~~~~~KP~~~~~~~~~~~lgv-~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
+....||+|+++..++++++. ++++|+||||+.+|+.+|+++|+.+++|.+|
T Consensus 239 ~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 239 PDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred chhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 344689999999999999998 5799999999999999999999999999766
No 79
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.56 E-value=1.5e-14 Score=116.95 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=73.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCC-ChhhHHHHHHHhhc-------cchhcccceeecccchhhhhccCCcCCccccc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAA-TKSSVILCLENLIG-------MERFEGLDCFLADCQSYVLMTNGTLMPNRVCV 250 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~-~~~~~~~~l~~l~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 250 (344)
.++||+.++|+.|+++|++++++||+ ....+...++.. + +..+ |+.+++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~-~~~~~i~~l~~~--f~~~~~-------------------- 85 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIF-EDFGIIFPLAEY--FDPLTI-------------------- 85 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhc-cccccchhhHhh--hhhhhh--------------------
Confidence 58899999999999999999999999 777777777775 4 3444 455554
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHH
Q 019226 251 CAHQGDDVKQKKPDPSIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATR 297 (344)
Q Consensus 251 ~~~~~~~~~~~KP~~~~~~~~~~~lg--v~~~~~i~vGDs~~Di~~a~~ 297 (344)
++ .+|+|++|..+++++| +.|++|+||||+..|+...+.
T Consensus 86 ----~~----~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 86 ----GY----WLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ----cC----CCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 43 3589999999999999 999999999999999877654
No 80
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.56 E-value=2.5e-14 Score=116.76 Aligned_cols=93 Identities=27% Similarity=0.413 Sum_probs=80.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
..-|.+.+.+.+++++|+++.|+||+...-+....+.+ + ++.+.
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l-~------v~fi~----------------------------- 89 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL-G------VPFIY----------------------------- 89 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc-C------Cceee-----------------------------
Confidence 45567888999999999999999999998888877775 3 23333
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeC
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYT 307 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~ 307 (344)
...||-+..|+++++++++++++|+||||.. .|+.+++++||.||.|..
T Consensus 90 ~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 90 RAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred cccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 2389999999999999999999999999999 699999999999999864
No 81
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.56 E-value=2.4e-14 Score=119.57 Aligned_cols=115 Identities=12% Similarity=0.139 Sum_probs=86.5
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
++++|+++|++++|+||.....+...++.+ ++.. ++. + .||+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~-gi~~------~~~------------------------~-----~~~k~~ 79 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL-GITH------LYQ------------------------G-----QSNKLI 79 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc-CCCE------EEe------------------------c-----ccchHH
Confidence 799999999999999999998888888876 4433 233 2 378899
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhhh
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
++..+++++|+++++|+||||+.+|+++++.+|+. +.+.+... ...+.+.+++++-..- .-|.+++++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~--~~~~~a~~i~~~~~~~--g~~~~~~~~~~~ 150 (154)
T TIGR01670 80 AFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHP--LLIPRADYVTRIAGGR--GAVREVCELLLL 150 (154)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCH--HHHHhCCEEecCCCCC--cHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 55544433 2233455566443322 226666666554
No 82
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.55 E-value=7.7e-14 Score=123.84 Aligned_cols=100 Identities=16% Similarity=0.177 Sum_probs=77.5
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCC----hhhHHHHHHHhhcc--chhcccceeecccchhhhhccCCcCCccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAAT----KSSVILCLENLIGM--ERFEGLDCFLADCQSYVLMTNGTLMPNRVCV 250 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~----~~~~~~~l~~l~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 250 (344)
...++||+.++|+.|+++|++++++||.. ...++.+++.+ ++ ..+ ++.++.
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~-gip~~~~--f~vil~-------------------- 168 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF-HIPADNM--NPVIFA-------------------- 168 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc-CCCcccc--eeEEEc--------------------
Confidence 36899999999999999999999999964 33455555554 66 444 455555
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchh
Q 019226 251 CAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 251 ~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
++.. .||++.. +++++++ ++||||+.+|+++|++||+.++.+.++....
T Consensus 169 ----gd~~--~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 169 ----GDKP--GQYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAANST 217 (237)
T ss_pred ----CCCC--CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCCCC
Confidence 5543 6777754 5556765 8999999999999999999999998887643
No 83
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.54 E-value=6.7e-14 Score=122.74 Aligned_cols=89 Identities=29% Similarity=0.436 Sum_probs=76.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.++||+.++|+.|+++|++++++|+.+...+..+.+.+ ++. +..+. +...
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l-gi~-----~~~v~------------------------a~~~ 176 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL-GIF-----DSIVF------------------------ARVI 176 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT-TSC-----SEEEE------------------------ESHE
T ss_pred cchhhhhhhhhhhhccCcceeeeecccccccccccccc-ccc-----ccccc------------------------cccc
Confidence 57899999999999999999999999999899888886 652 32222 2222
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG 299 (344)
+||++.+|..+++++++++++|+||||+.||+.|+++||
T Consensus 177 --~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 --GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred --ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 699999999999999999999999999999999999997
No 84
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.54 E-value=1e-13 Score=126.45 Aligned_cols=228 Identities=9% Similarity=0.131 Sum_probs=122.9
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHH---hcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCC---
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFS---HFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWP--- 139 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--- 139 (344)
++|+|+||+||||++....+.+...+++. +.|+.....++|.+.. +..+++..+..
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~------------------~~~~~~~l~~~~~~ 63 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHVA------------------IHPFYQALALDTPA 63 (272)
T ss_pred CccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHH------------------HHHHHHhcCCCCCE
Confidence 58999999999999887655444455554 4577766655544333 33333332221
Q ss_pred ------------CccccCCCCCCchhHHHHHHHHHHHHH----------------HHHHHH--H-H---hCCCccCccHH
Q 019226 140 ------------SSTIFDNPPVTDDDQAKLIDLIQDWKT----------------ERYQQI--I-K---SGTVEPRPGVL 185 (344)
Q Consensus 140 ------------~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------~~~~~~--~-~---~~~~~~~pgv~ 185 (344)
..+++....++.+...++.+.+.+... ..+... + . ......++++.
T Consensus 64 I~~NGa~i~d~~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (272)
T PRK10530 64 ICCNGTYLYDYQAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVD 143 (272)
T ss_pred EEcCCcEEEecCCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcc
Confidence 112333334444444444444322100 000000 0 0 00112356777
Q ss_pred HHHHHHHHcCCeEEEEeCCCh-hhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCC
Q 019226 186 RLMDEAKAAGKKVAVCSAATK-SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPD 264 (344)
Q Consensus 186 ~~l~~Lk~~g~~v~ivTn~~~-~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~ 264 (344)
++++.++..+..+.++++... ...+...+.+. ..+ ++....+. .++ -+-+..+..+
T Consensus 144 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~-~~~~~~s~-~~~-------------------~ei~~~~~~K 200 (272)
T PRK10530 144 SLAQAARQVNAIWKFALTHEDLPQLQHFAKHVE--HEL-GLECEWSW-HDQ-------------------VDIARKGNSK 200 (272)
T ss_pred cHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHh--hhc-CceEEEec-Cce-------------------EEEecCCCCh
Confidence 778877777766667776442 11222222221 111 11111110 000 1122334457
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 265 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 265 ~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+..++.+++++|+++++|++|||+.||++|++.+|+..++ ++...+....+++++++-.+- -+.++++++
T Consensus 201 ~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam---gna~~~lk~~Ad~v~~~n~~d---Gv~~~l~~~ 270 (272)
T PRK10530 201 GKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM---GNADDAVKARADLVIGDNTTP---SIAEFIYSH 270 (272)
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe---cCchHHHHHhCCEEEecCCCC---cHHHHHHHH
Confidence 8899999999999999999999999999999999987655 223333334577777665443 344444443
No 85
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.52 E-value=1.5e-13 Score=116.03 Aligned_cols=112 Identities=19% Similarity=0.256 Sum_probs=84.5
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
.+..|+++|++++|+||.....++..++.+ ++..+ +. . .||+|+
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~l-gi~~~------f~------------------------~-----~kpkp~ 85 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEEL-KIKRF------HE------------------------G-----IKKKTE 85 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHC-CCcEE------Ee------------------------c-----CCCCHH
Confidence 567788899999999999999999999997 65443 22 1 279999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc-CHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV-RLKDLELLL 337 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~-~~~~l~~ll 337 (344)
.|..+++++++++++|++|||+.+|+.|++.+|+..++-+.. ......+.++..+-.+- -+.++.+.+
T Consensus 86 ~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~---~~lk~~A~~I~~~~~~~g~v~e~~e~i 154 (169)
T TIGR02726 86 PYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAV---ADVKEAAAYVTTARGGHGAVREVAELI 154 (169)
T ss_pred HHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCch---HHHHHhCCEEcCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999998764322 23334456665433322 234554444
No 86
>PRK11590 hypothetical protein; Provisional
Probab=99.50 E-value=8.5e-13 Score=116.12 Aligned_cols=192 Identities=10% Similarity=-0.040 Sum_probs=108.8
Q ss_pred CccEEEEecCccccccchhHHHHHHHHH-HhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAF-SHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
..|+++||+||||++. .....+...+ .++|+.... ...+...+|.+......... .+ ...++
T Consensus 5 ~~k~~iFD~DGTL~~~--d~~~~~~~~~~~~~g~~~~~------------~~~~~~~ig~~l~~~~~~~~-~~--~~~~~ 67 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQ--DMFGSFLRYLLRRQPLNLLL------------VLPLLPVIGLGLLVKGRAAR-WP--MSLLL 67 (211)
T ss_pred cceEEEEecCCCCccc--chHHHHHHHHHHhcchhhHH------------HhHHHHHhccCcccchhhhh-hh--HHHHH
Confidence 4579999999999943 3556666666 777765322 23344445544433111100 00 00000
Q ss_pred C--CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHH-HHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 145 D--NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM-DEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 145 ~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l-~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
. ..+.+.++ .+.+.+.+.+.|... ..++||+.++| +.+++.|++++|+||.....++.+++.+ ++..
T Consensus 68 ~~~~~g~~~~~----~~~~~~~f~~~~~~~-----~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l-~~~~ 137 (211)
T PRK11590 68 WGCTFGHSEAR----LQALEADFVRWFRDN-----VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT-PWLP 137 (211)
T ss_pred HHHHcCCCHHH----HHHHHHHHHHHHHHh-----CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc-cccc
Confidence 0 00111121 233333344444332 46799999999 5788899999999999999999999886 4211
Q ss_pred hcccceeecccchhhhhc-cCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 222 FEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
.+.+++. -+++. +|.+ ......+.-|. ..+.+.++.+.+.+.+.|||.+|+.+...+|-
T Consensus 138 ---~~~~i~t---~l~~~~tg~~-----------~g~~c~g~~K~---~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~ 197 (211)
T PRK11590 138 ---RVNLIAS---QMQRRYGGWV-----------LTLRCLGHEKV---AQLERKIGTPLRLYSGYSDSKQDNPLLYFCQH 197 (211)
T ss_pred ---cCceEEE---EEEEEEccEE-----------CCccCCChHHH---HHHHHHhCCCcceEEEecCCcccHHHHHhCCC
Confidence 1333331 01111 2222 11111122122 33334457677888999999999999999999
Q ss_pred eEEE
Q 019226 301 ACVI 304 (344)
Q Consensus 301 ~~v~ 304 (344)
..+.
T Consensus 198 ~~~v 201 (211)
T PRK11590 198 RWRV 201 (211)
T ss_pred CEEE
Confidence 9653
No 87
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.49 E-value=4.5e-13 Score=112.99 Aligned_cols=112 Identities=27% Similarity=0.379 Sum_probs=85.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhh------------HHHHHHHhhccchhcccceeecccchhhhhccCCcCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS------------VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~------------~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 245 (344)
+.+.||+.+.+..|++.||+++++||.+.-. -..++..+ .-.. ..++.
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l-~~~g-v~id~------------------ 89 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL-ASQG-VKIDG------------------ 89 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHH-HHcC-Cccce------------------
Confidence 5788999999999999999999999943211 11111111 0000 01233
Q ss_pred ccccccccCCCC-CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 246 NRVCVCAHQGDD-VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 246 ~~~~~~~~~~~~-~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.-+|+|..++ ..++||++.++..+++++++++++.++|||...|+++|.++|+..+.+.++...
T Consensus 90 --i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~ 154 (181)
T COG0241 90 --ILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGV 154 (181)
T ss_pred --EEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCccc
Confidence 3458888877 678999999999999999999999999999999999999999998877665443
No 88
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.49 E-value=1.9e-13 Score=117.53 Aligned_cols=112 Identities=13% Similarity=0.151 Sum_probs=82.5
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
.++.|+++|++++|+||.....+...++.+ ++..+ +. + .+++++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l-gl~~~------f~------------------------g-----~~~k~~ 99 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTL-GITHL------YQ------------------------G-----QSNKLI 99 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHc-CCcee------ec------------------------C-----CCcHHH
Confidence 567778899999999999999899888886 54332 22 2 356789
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC-ccccCHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD-LSNVRLKDLELLL 337 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~~ll 337 (344)
.+..+++++|+++++|+||||+.+|+.+++++|+.++ +.+ ........++++++. -..-.+.+|.+++
T Consensus 100 ~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~--~~~~~~~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 100 AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VAD--AHPLLLPRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCC--hhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999954 432 222222345666642 3333456666544
No 89
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.46 E-value=7.2e-14 Score=125.55 Aligned_cols=99 Identities=20% Similarity=0.263 Sum_probs=77.1
Q ss_pred CccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccccee--ecccchhhhhccCCcCCccccccccCCCCC
Q 019226 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF--LADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 181 ~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++++.++++.|+++|+++ ++||.+.......+... +...+ +..+ .+ ++..
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~-~~g~~--~~~i~~~g------------------------~~~~ 191 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRY-GAGYY--AELIKQLG------------------------GKVI 191 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEe-cccHH--HHHHHHhC------------------------CcEe
Confidence 689999999998899997 88999887665444443 33333 2222 22 4445
Q ss_pred CCCCCCHHHHHHHHHHcCCC-CCcEEEEecC-HhhHHHHHHcCCeEEEEeC
Q 019226 259 KQKKPDPSIYVTAAKRLGIS-EKDCLVVEDS-VIGLQAATRAGMACVITYT 307 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs-~~Di~~a~~aG~~~v~v~~ 307 (344)
..+||+|.+|+.+++++|.. +++|+||||+ .+|+.+|+++|+.+++|.+
T Consensus 192 ~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 192 YSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred cCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 57999999999999999975 6799999999 5899999999999999853
No 90
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=99.46 E-value=8.1e-13 Score=117.89 Aligned_cols=88 Identities=19% Similarity=0.264 Sum_probs=73.4
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEEeCCCchhhhccc---cccccCCccc
Q 019226 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKD---AIAIYPDLSN 327 (344)
Q Consensus 252 ~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~aG~~~v~v~~~~~~~~~l~~---~~~~~~~~~~ 327 (344)
.++.+....+||++.+++.+.++++++|++++||||+.+ ||.-++++|++++++.+|.+..++... ....+||++.
T Consensus 214 ~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~ 293 (306)
T KOG2882|consen 214 ATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYA 293 (306)
T ss_pred HhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHH
Confidence 445566778999999999999999999999999999996 999999999999999999987666543 3456788887
Q ss_pred cCHHHHHHHHHH
Q 019226 328 VRLKDLELLLQN 339 (344)
Q Consensus 328 ~~~~~l~~ll~~ 339 (344)
-.+.++..++++
T Consensus 294 ~~l~d~~~~~~~ 305 (306)
T KOG2882|consen 294 DSLGDLLPLLNN 305 (306)
T ss_pred hhHHHHhhhccC
Confidence 777777766543
No 91
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.42 E-value=2.5e-12 Score=107.26 Aligned_cols=133 Identities=19% Similarity=0.198 Sum_probs=86.5
Q ss_pred hCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCcccccccc
Q 019226 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNRVCVCAH 253 (344)
Q Consensus 175 ~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (344)
...+.+-||+++++..|+++|.+++++|++++.++..+...| +++.-+ ++. |.++. ++|++.
T Consensus 84 ~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L-gi~~~n----~yA---N~l~fd~~Gk~~--------- 146 (227)
T KOG1615|consen 84 KQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL-GIPKSN----IYA---NELLFDKDGKYL--------- 146 (227)
T ss_pred cCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh-CCcHhh----hhh---heeeeccCCccc---------
Confidence 356789999999999999999999999999999999999997 776621 111 11122 244432
Q ss_pred CCCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc
Q 019226 254 QGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 254 ~~~~----~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
+-+ ...+--+++.+..+.+ +...+.++||||+.+|++|..- |..++.........+...++.+.+.+|+.+
T Consensus 147 -gfd~~~ptsdsggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 147 -GFDTNEPTSDSGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGNVIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred -ccccCCccccCCccHHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCceEcHhhHhccHHHHHHHHHH
Confidence 211 1223335677777766 7888999999999999988765 333333322222223334445555454433
No 92
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.42 E-value=3.2e-13 Score=119.78 Aligned_cols=69 Identities=14% Similarity=0.071 Sum_probs=54.6
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
+.+..+.+|...+..+++++|++++++++|||+.||+.|++.+|+..++ ++...+....++++.++..+
T Consensus 142 ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam---~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV---ANAQPELKEWADYVTESPYG 210 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc---CChhHHHHHhcCeecCCCCC
Confidence 3345567889999999999999999999999999999999999999776 33444444567777765443
No 93
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.40 E-value=4.6e-13 Score=119.16 Aligned_cols=67 Identities=15% Similarity=0.087 Sum_probs=52.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
...+..|+..+..+++++|++++++++|||+.||++|++.+|+..++-+ ...+....++++.++..+
T Consensus 152 ~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N---a~~~vk~~a~~v~~~n~~ 218 (230)
T PRK01158 152 KSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVAN---ADEELKEAADYVTEKSYG 218 (230)
T ss_pred eeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecC---ccHHHHHhcceEecCCCc
Confidence 4456778999999999999999999999999999999999999977633 333333456777765443
No 94
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.39 E-value=2.8e-12 Score=114.79 Aligned_cols=50 Identities=26% Similarity=0.407 Sum_probs=46.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcE-EEEecCH-hhHHHHHHcCCeEEEEeCC
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDC-LVVEDSV-IGLQAATRAGMACVITYTS 308 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~-i~vGDs~-~Di~~a~~aG~~~v~v~~~ 308 (344)
..+||++.+|+.++++++++++++ +||||+. .|+.+|+++|+.+++|.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 468999999999999999998887 9999998 7999999999999999764
No 95
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.38 E-value=2.4e-12 Score=120.33 Aligned_cols=91 Identities=13% Similarity=0.089 Sum_probs=78.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH----hhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN----LIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~----l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
.+++|+.++|+.|+++|++++|+|+++...+..++++ + ++..+ |+.+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~-~~~~~--f~~~~~------------------------ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI-LQAED--FDARSI------------------------ 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc-CcHHH--eeEEEE------------------------
Confidence 4688999999999999999999999999999999988 4 33333 344433
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
+ .||+++.+..+++++|+.+++++||||+..|+.++++++-.
T Consensus 84 ~-----~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 84 N-----WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred e-----cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 2 68999999999999999999999999999999999997764
No 96
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.38 E-value=1.2e-11 Score=115.67 Aligned_cols=85 Identities=16% Similarity=0.090 Sum_probs=60.7
Q ss_pred eecccchhhhhccCCc-CCcccccc----c----cCCCC---CCCCCCCHHHHHHHHHHc--------CC-----CCCcE
Q 019226 228 FLADCQSYVLMTNGTL-MPNRVCVC----A----HQGDD---VKQKKPDPSIYVTAAKRL--------GI-----SEKDC 282 (344)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~~~~~~~----~----~~~~~---~~~~KP~~~~~~~~~~~l--------gv-----~~~~~ 282 (344)
++..++|..-.+++++ .|+-..+. . .++.+ ...+||++.+|+.+++.+ ++ +++++
T Consensus 187 ~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~~~~tg~~~~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 266 (321)
T TIGR01456 187 IYFSNQDLLWANEYKLNRFGQGAFRLLLERIYLELNGKPLQYYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHAL 266 (321)
T ss_pred EEEeCCCEeeccCCCCceechHHHHHHHHHHHHHhcCCCcceEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheE
Confidence 3444666655554443 45444433 1 23333 356999999999998887 43 45799
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEeCCCchh
Q 019226 283 LVVEDSV-IGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 283 i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
+||||+. .|+.+|+++||.+++|.+|....
T Consensus 267 ~mIGD~~~tDI~ga~~~G~~silV~tG~~~~ 297 (321)
T TIGR01456 267 YMVGDNPASDIIGAQNYGWFSCLVKTGVYNG 297 (321)
T ss_pred EEEcCChhhhhhhHHhCCceEEEecccccCC
Confidence 9999999 69999999999999999886544
No 97
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.37 E-value=9.9e-13 Score=96.06 Aligned_cols=68 Identities=29% Similarity=0.503 Sum_probs=60.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEeCCCchhhhcc----ccccccCCccc
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSN 327 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs-~~Di~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~ 327 (344)
++||+|.+|..+++++++++++|+||||+ ..|+.+|+++|+.+|+|.++....+.+. .++++++++.+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 48999999999999999999999999999 6899999999999999999887765543 57888888765
No 98
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.37 E-value=2.7e-11 Score=107.06 Aligned_cols=156 Identities=12% Similarity=0.118 Sum_probs=104.2
Q ss_pred CCccCccHHHHHHHH--HHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhc-cCCcCCcccccccc
Q 019226 177 TVEPRPGVLRLMDEA--KAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAH 253 (344)
Q Consensus 177 ~~~~~pgv~~~l~~L--k~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 253 (344)
.+++.||+.++++.+ ++.|+.+.|+|+++..+++.++++. ++... |+.+++ |...+. +|.+....++ +|
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~-gl~~~--f~~I~T---Npa~~~~~G~l~v~pyh--~h 140 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH-GLRDC--FSEIFT---NPACFDADGRLRVRPYH--SH 140 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC-CCccc--cceEEe---CCceecCCceEEEeCcc--CC
Confidence 478999999999999 4579999999999999999999997 77665 677877 666665 4554322221 12
Q ss_pred CCCCC-CCCCCCHHHHHHHHHH---cCCCCCcEEEEecCHhhHHHHHHcCCe-EEEEeCCCchhhhccc-cccc-cCCcc
Q 019226 254 QGDDV-KQKKPDPSIYVTAAKR---LGISEKDCLVVEDSVIGLQAATRAGMA-CVITYTSSTAEQDFKD-AIAI-YPDLS 326 (344)
Q Consensus 254 ~~~~~-~~~KP~~~~~~~~~~~---lgv~~~~~i~vGDs~~Di~~a~~aG~~-~v~v~~~~~~~~~l~~-~~~~-~~~~~ 326 (344)
. +.. +..-=|...++..++. -|+..++++||||+.||+-.+.+.+-. .|+.-.+..-...+.. +..+ ..=..
T Consensus 141 ~-C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~ 219 (234)
T PF06888_consen 141 G-CSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVP 219 (234)
T ss_pred C-CCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEe
Confidence 2 211 1111146777777766 478889999999999999999998776 4444444443333332 1111 11122
Q ss_pred ccCHHHHHHHHHHhh
Q 019226 327 NVRLKDLELLLQNVV 341 (344)
Q Consensus 327 ~~~~~~l~~ll~~~~ 341 (344)
-.+-.+|.+.|++++
T Consensus 220 W~~g~~i~~~l~~~i 234 (234)
T PF06888_consen 220 WSSGEEILEILLQLI 234 (234)
T ss_pred cCCHHHHHHHHHhhC
Confidence 235678888887764
No 99
>PRK08238 hypothetical protein; Validated
Probab=99.35 E-value=3.4e-11 Score=117.63 Aligned_cols=100 Identities=19% Similarity=0.261 Sum_probs=79.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
.+++||+.+++++++++|++++++|++....++.+++++ ++ ||.+++ +++
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l-Gl-----Fd~Vig------------------------sd~ 120 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL-GL-----FDGVFA------------------------SDG 120 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CC-----CCEEEe------------------------CCC
Confidence 567899999999999999999999999999999998886 43 588887 676
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
....||+++. +.+.+.++ .++++++||+.+|+.+++.+| ..+.|+.+...
T Consensus 121 ~~~~kg~~K~-~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~~l 170 (479)
T PRK08238 121 TTNLKGAAKA-AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASPGV 170 (479)
T ss_pred ccccCCchHH-HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCHHH
Confidence 6667766543 33445665 366899999999999999999 55667655543
No 100
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.33 E-value=1.8e-12 Score=107.53 Aligned_cols=96 Identities=20% Similarity=0.166 Sum_probs=84.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+.++||+.++|+.|+ ++++++|+|++....++.+++++ ++..+ .++.+++ +++
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l-~~~~~-~f~~i~~------------------------~~d 96 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL-DPKKY-FGYRRLF------------------------RDE 96 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh-CcCCC-EeeeEEE------------------------Ccc
Confidence 688999999999999 57999999999999999999887 55432 1577777 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
+...||+ |.++++++|++|++|++|||+.+|++++.++|+.+-
T Consensus 97 ~~~~KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 97 CVFVKGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ccccCCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 8888997 999999999999999999999999999999998753
No 101
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.33 E-value=6.2e-12 Score=123.35 Aligned_cols=94 Identities=20% Similarity=0.285 Sum_probs=76.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCCh------------hhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATK------------SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~------------~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
.++||+.+.|+.|++.||+++|+||... ..+..+++.+ ++. |+.+++
T Consensus 197 ~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l-gip----fdviia---------------- 255 (526)
T TIGR01663 197 IIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL-GVP----FQVFIA---------------- 255 (526)
T ss_pred ecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc-CCc----eEEEEe----------------
Confidence 3689999999999999999999999766 2355566665 432 466666
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHcC----CCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLG----ISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg----v~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
.++...+||++.++..++++++ +++++++||||...|+++++++|..
T Consensus 256 --------~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 256 --------IGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred --------CCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence 5566678999999999999985 8999999999999998887777753
No 102
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.32 E-value=1.6e-11 Score=112.28 Aligned_cols=54 Identities=11% Similarity=0.032 Sum_probs=45.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEEeCCCchh
Q 019226 258 VKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~-~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
+..+ .+...++.+++.+|+++ +++++|||+.||++|++.+|+.+++-+......
T Consensus 186 ~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 186 LGGG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred eCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 3344 67789999999999999 999999999999999999999998866554444
No 103
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.27 E-value=1.2e-10 Score=106.18 Aligned_cols=78 Identities=10% Similarity=0.129 Sum_probs=59.7
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
-+..+-.|...++.+++.+|++++++++|||+.||++|.+.+|...++ ++...+.+..++++.++..+ .-+.+.
T Consensus 190 I~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm---~NA~~~vK~~A~~vt~~n~~---dGva~~ 263 (270)
T PRK10513 190 ILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM---GNAIPSVKEVAQFVTKSNLE---DGVAFA 263 (270)
T ss_pred EeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe---cCccHHHHHhcCeeccCCCc---chHHHH
Confidence 345567789999999999999999999999999999999999999877 34444455567887765443 334455
Q ss_pred HHHh
Q 019226 337 LQNV 340 (344)
Q Consensus 337 l~~~ 340 (344)
++++
T Consensus 264 i~~~ 267 (270)
T PRK10513 264 IEKY 267 (270)
T ss_pred HHHH
Confidence 5444
No 104
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.27 E-value=3.7e-10 Score=93.35 Aligned_cols=107 Identities=19% Similarity=0.269 Sum_probs=83.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh-cccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF-EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..+||++.+.|++.++.|+++.|.|.+.....+..+.+- ...++ ..|+.++.
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs-~agdL~~lfsGyfD-------------------------- 154 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHS-DAGDLNSLFSGYFD-------------------------- 154 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhccc-ccccHHhhhcceee--------------------------
Confidence 479999999999999999999999999987666555443 11111 01232222
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
..-..|-....|.++++..|++|.+++|+.|.++.+.+|+.+||.++.+.++...
T Consensus 155 ttiG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~ 209 (229)
T COG4229 155 TTIGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNA 209 (229)
T ss_pred ccccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCC
Confidence 1222577788999999999999999999999999999999999999988776643
No 105
>PTZ00445 p36-lilke protein; Provisional
Probab=99.26 E-value=3.2e-11 Score=103.15 Aligned_cols=108 Identities=15% Similarity=0.166 Sum_probs=80.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhh---------------HHHHHHHhhccchhcccceeecccchhhhhccCCc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS---------------VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~---------------~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~ 243 (344)
.+.|+...++.+|++.|++++|||-++... ++..++.- ..+ ...+.+++
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s-~~~--~~i~~~~~------------- 138 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKS-KCD--FKIKKVYA------------- 138 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhc-Ccc--ceeeeeee-------------
Confidence 577888999999999999999999887743 33333321 100 01222332
Q ss_pred CCccccccccCCC------CCCCCCCCHHH--H--HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 244 MPNRVCVCAHQGD------DVKQKKPDPSI--Y--VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 244 ~~~~~~~~~~~~~------~~~~~KP~~~~--~--~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
++|..=. .++..||+|.+ | ++++++.|+.|++|+||+|+..++++|++.|+.++.+.++
T Consensus 139 ------yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 139 ------YYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred ------eCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 2222111 24678999999 9 9999999999999999999999999999999999987643
No 106
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.24 E-value=2e-10 Score=103.76 Aligned_cols=107 Identities=15% Similarity=0.176 Sum_probs=80.6
Q ss_pred HHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccc
Q 019226 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCV 250 (344)
Q Consensus 171 ~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 250 (344)
+.+....+.+.||+.++++.|+++|++++|+|++....++.+++++ ++... +..+++ |++.+.
T Consensus 113 ~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l-gl~~~--~~~IvS---N~L~f~----------- 175 (277)
T TIGR01544 113 EIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA-GVYHP--NVKVVS---NFMDFD----------- 175 (277)
T ss_pred HHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc-CCCCc--CceEEe---eeEEEC-----------
Confidence 3333346899999999999999999999999999999999999987 55432 244544 333332
Q ss_pred cccCCCCCCCCCCCH---------HHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHc
Q 019226 251 CAHQGDDVKQKKPDP---------SIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 251 ~~~~~~~~~~~KP~~---------~~~~~~~~~lg--v~~~~~i~vGDs~~Di~~a~~a 298 (344)
.+.+..++|.| ..++.+++.++ +++++|++|||+.+|+.||...
T Consensus 176 ----~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 176 ----EDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ----CCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 12222344555 66777888998 8899999999999999997766
No 107
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.22 E-value=3.1e-11 Score=106.40 Aligned_cols=65 Identities=14% Similarity=0.058 Sum_probs=51.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 326 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~ 326 (344)
..+..+...++.+++++|++++++++|||+.||++|++.+|+..++-+ ..++....++++.++-.
T Consensus 143 ~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~n---a~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 143 KKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVAN---ADDQLKEIADYVTSNPY 207 (215)
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCC---ccHHHHHhCCEEcCCCC
Confidence 345667889999999999999999999999999999999999987743 33333344667766433
No 108
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.22 E-value=2.6e-11 Score=101.84 Aligned_cols=108 Identities=19% Similarity=0.287 Sum_probs=69.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeC-CChhhHHHHHHHhhccchhccc----ceeecccchhhhhccCCcCCcccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSA-ATKSSVILCLENLIGMERFEGL----DCFLADCQSYVLMTNGTLMPNRVCVC 251 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn-~~~~~~~~~l~~l~~~~~~~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (344)
.+.+||++.++|+.|+.+|++++++|- .....++.+++.+ ++...... ..++.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l-~i~~~~~~~~~~~~~F~--------------------- 100 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLL-EIDDADGDGVPLIEYFD--------------------- 100 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHT-T-C----------CCEC---------------------
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhc-CCCccccccccchhhcc---------------------
Confidence 478999999999999999999999994 4566788888886 66511000 01111
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 252 ~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
.-+.. .-.+...|..+.++.|++.++++||+|-..++....+.|..+|.+.+|-+
T Consensus 101 ---~~eI~-~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 101 ---YLEIY-PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp ---EEEES-SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred ---hhhee-cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 11122 23678999999999999999999999999999999999999999987544
No 109
>PLN02887 hydrolase family protein
Probab=99.21 E-value=4.9e-10 Score=111.55 Aligned_cols=78 Identities=14% Similarity=0.079 Sum_probs=59.9
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
-+..+-.|...++.+++.+|++++++++|||+.||++|.+.+|...++ ++...+....++++.++..+ +-+.+.
T Consensus 501 I~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM---gNA~eeVK~~Ad~VT~sNdE---DGVA~a 574 (580)
T PLN02887 501 IVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL---SNGAEKTKAVADVIGVSNDE---DGVADA 574 (580)
T ss_pred EecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe---CCCCHHHHHhCCEEeCCCCc---CHHHHH
Confidence 345566789999999999999999999999999999999999999877 34444445567777765433 445555
Q ss_pred HHHh
Q 019226 337 LQNV 340 (344)
Q Consensus 337 l~~~ 340 (344)
|++.
T Consensus 575 Lek~ 578 (580)
T PLN02887 575 IYRY 578 (580)
T ss_pred HHHh
Confidence 5543
No 110
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.21 E-value=3.3e-10 Score=103.52 Aligned_cols=78 Identities=12% Similarity=0.149 Sum_probs=57.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcccccc--ccCCccccCHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNVRLKDLEL 335 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~ 335 (344)
+..+-.|...++.+++.+|++++++++|||+.||++|.+.+|...++ ++...+....+++ ++++.. ..-+.+
T Consensus 183 ~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm---~Na~~~vK~~A~~~~v~~~n~---edGva~ 256 (272)
T PRK15126 183 LPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM---GNAMPQLRAELPHLPVIGHCR---NQAVSH 256 (272)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec---cCChHHHHHhCCCCeecCCCc---chHHHH
Confidence 44556679999999999999999999999999999999999998776 3333334444443 554432 345566
Q ss_pred HHHHhh
Q 019226 336 LLQNVV 341 (344)
Q Consensus 336 ll~~~~ 341 (344)
.|++.+
T Consensus 257 ~l~~~~ 262 (272)
T PRK15126 257 YLTHWL 262 (272)
T ss_pred HHHHHh
Confidence 665544
No 111
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.19 E-value=7.4e-10 Score=94.45 Aligned_cols=160 Identities=14% Similarity=0.177 Sum_probs=102.7
Q ss_pred CCccCccHHHHHHHHHHcCC-eEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhc-cCCcCCccccccccC
Q 019226 177 TVEPRPGVLRLMDEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAHQ 254 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~-~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 254 (344)
.+.+.||+.++++.+++.|. .+.|+|..+..+++++++++ ++..+ |..+++ |+..+. +|.|.--.++ .+|.
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~-~~~d~--F~~IfT---NPa~~da~G~L~v~pyH-~~hs 154 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA-GIHDL--FSEIFT---NPACVDASGRLLVRPYH-TQHS 154 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc-cHHHH--HHHHhc---CCcccCCCCcEEeecCC-CCCc
Confidence 47899999999999999985 99999999999999999998 77776 567766 555555 5555432232 1121
Q ss_pred CCCCCCCCCCHHHHHHHHHH---cCCCCCcEEEEecCHhhHHHHHHc-CCeEEEEeCCCchhhhcc-ccccccCCccc-c
Q 019226 255 GDDVKQKKPDPSIYVTAAKR---LGISEKDCLVVEDSVIGLQAATRA-GMACVITYTSSTAEQDFK-DAIAIYPDLSN-V 328 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~---lgv~~~~~i~vGDs~~Di~~a~~a-G~~~v~v~~~~~~~~~l~-~~~~~~~~~~~-~ 328 (344)
..-....-=+...++.+... -|+..++.+||||+.||+-..... +...++.-.+........ ++...-.++.+ -
T Consensus 155 C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~ 234 (256)
T KOG3120|consen 155 CNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVLEWS 234 (256)
T ss_pred cCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEEecc
Confidence 11111111134455544433 377788999999999999776665 445555444444332211 12222222222 2
Q ss_pred CHHHHHHHHHHhhhc
Q 019226 329 RLKDLELLLQNVVAA 343 (344)
Q Consensus 329 ~~~~l~~ll~~~~~~ 343 (344)
+-.++..+|++++++
T Consensus 235 sg~d~~~~L~~lik~ 249 (256)
T KOG3120|consen 235 SGEDLERILQQLIKT 249 (256)
T ss_pred cHHHHHHHHHHHHHH
Confidence 568899999988765
No 112
>PRK10976 putative hydrolase; Provisional
Probab=99.18 E-value=7.4e-10 Score=100.83 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=57.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccc--cccCCccccCHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAI--AIYPDLSNVRLKDLEL 335 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~ 335 (344)
+..+-.|...++.+++++|++++++++|||+.||++|.+.+|...++- +...+....++ ++.++. +..-+.+
T Consensus 185 ~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~---NA~~~vK~~A~~~~v~~~n---~edGVa~ 258 (266)
T PRK10976 185 MAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG---NAHQRLKDLLPELEVIGSN---ADDAVPH 258 (266)
T ss_pred EcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec---CCcHHHHHhCCCCeecccC---chHHHHH
Confidence 445666799999999999999999999999999999999999998773 33333334443 555543 2345666
Q ss_pred HHHHhh
Q 019226 336 LLQNVV 341 (344)
Q Consensus 336 ll~~~~ 341 (344)
.|++++
T Consensus 259 ~l~~~~ 264 (266)
T PRK10976 259 YLRKLY 264 (266)
T ss_pred HHHHHh
Confidence 665543
No 113
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.16 E-value=3.3e-10 Score=103.07 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=55.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+..+..|....+.+++++|++++++++|||+.||++|.+.+|...++-+ ..++....++++..+-.+ ..+.+.+
T Consensus 184 ~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~N---a~~~~k~~A~~vt~~n~~---~Gv~~~l 257 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGN---ADEELKELADYVTTSNDE---DGVAEAL 257 (264)
T ss_pred ecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccC---CCHHHHhhCCcccCCccc---hHHHHHH
Confidence 4567778999999999999999999999999999999999999988733 333333344544343332 4455555
Q ss_pred HHh
Q 019226 338 QNV 340 (344)
Q Consensus 338 ~~~ 340 (344)
++.
T Consensus 258 ~~~ 260 (264)
T COG0561 258 EKL 260 (264)
T ss_pred HHH
Confidence 444
No 114
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.15 E-value=3.9e-09 Score=92.68 Aligned_cols=107 Identities=12% Similarity=-0.024 Sum_probs=70.7
Q ss_pred CccCccHHHHHH-HHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMD-EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~-~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+ .++++|++++|+||.....++.+.+..+.+.. +.+++ .-+++.+|+.. ..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~---t~le~~~gg~~----------~g 155 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIA---SQIERGNGGWV----------LP 155 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEE---EEeEEeCCceE----------cC
Confidence 468999999996 78889999999999999989988877411121 23333 12333343211 11
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
....+.-|.. .+.+.++.+.+.+.+.|||.+|+.|...+|-..+.
T Consensus 156 ~~c~g~~Kv~---rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 156 LRCLGHEKVA---QLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred ccCCChHHHH---HHHHHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 1111222222 33334465677889999999999999999999653
No 115
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.14 E-value=1e-09 Score=102.24 Aligned_cols=122 Identities=16% Similarity=0.189 Sum_probs=84.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhc-------cchhcccceeeccc--chhhhhccCCcCCcc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG-------MERFEGLDCFLADC--QSYVLMTNGTLMPNR 247 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~-------~~~~~~~d~~~~~~--~~~~~~~~~~~~~~~ 247 (344)
.+..+||+.++|+.|+++|++++|+||+....++.+++.+++ +..+ ||.+++-+ |.|-. + .+
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y--FD~IIt~a~KP~FF~--~-----~~ 252 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY--FDVVIVDARKPGFFT--E-----GR 252 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh--CcEEEeCCCCCcccC--C-----CC
Confidence 356799999999999999999999999999999999999744 5555 67776621 11100 0 01
Q ss_pred cccc--ccCCCCCC-C---CCC----CHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEEeC
Q 019226 248 VCVC--AHQGDDVK-Q---KKP----DPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYT 307 (344)
Q Consensus 248 ~~~~--~~~~~~~~-~---~KP----~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~-~aG~~~v~v~~ 307 (344)
.+.+ ..++.... . -+| ..--.....+.+|+.+++|+||||+. .|+.+++ .+||.+++|..
T Consensus 253 pf~~v~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 253 PFRQVDVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred ceEEEeCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 1110 10010000 0 011 01235677888999999999999999 5999998 99999999864
No 116
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.12 E-value=2.7e-09 Score=97.52 Aligned_cols=82 Identities=7% Similarity=-0.078 Sum_probs=57.8
Q ss_pred CCCCCCCHHHHHHHHHHcCC---CCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc----cccccccCCccccCH
Q 019226 258 VKQKKPDPSIYVTAAKRLGI---SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNVRL 330 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv---~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l----~~~~~~~~~~~~~~~ 330 (344)
+..+-.|....+.+++.+|+ +++++++|||+.||++|.+.+|...++-+.. ...+.+ ..++++.+. ...
T Consensus 182 ~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~-~~~~~l~~~~~~~~~~~~~---~~~ 257 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLN-REGVHLQDDDPARVYRTQR---EGP 257 (271)
T ss_pred ecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCC-CCCcccccccCCceEeccC---CCc
Confidence 44566788999999999999 9999999999999999999999998764322 111122 234444444 233
Q ss_pred HHHHHHHHHhhhc
Q 019226 331 KDLELLLQNVVAA 343 (344)
Q Consensus 331 ~~l~~ll~~~~~~ 343 (344)
+.+.+.++.++.+
T Consensus 258 ~g~~~~l~~~~~~ 270 (271)
T PRK03669 258 EGWREGLDHFFSA 270 (271)
T ss_pred HHHHHHHHHHHhc
Confidence 5666666665543
No 117
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.05 E-value=2.2e-09 Score=89.84 Aligned_cols=94 Identities=18% Similarity=0.232 Sum_probs=65.7
Q ss_pred ccCccHHHHHHHHHHcCC--eEEEEeCCC-------hhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 179 EPRPGVLRLMDEAKAAGK--KVAVCSAAT-------KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~--~v~ivTn~~-------~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
.+.|.+.+.++++++.+. +++|+||+. ...++.+.+.+ ++ ..+.-
T Consensus 59 ~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l-gI------pvl~h------------------- 112 (168)
T PF09419_consen 59 EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL-GI------PVLRH------------------- 112 (168)
T ss_pred cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh-CC------cEEEe-------------------
Confidence 455566677777777755 599999984 44444444443 32 22221
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHcCC-----CCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCC
Q 019226 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGI-----SEKDCLVVEDSV-IGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 250 ~~~~~~~~~~~~KP~~~~~~~~~~~lgv-----~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~ 309 (344)
...|| ..++.+++.++. .|+++++|||.. .|+.+|...|+.+||+..|.
T Consensus 113 ---------~~kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 113 ---------RAKKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred ---------CCCCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 12566 556666666654 499999999999 59999999999999998774
No 118
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.04 E-value=3e-10 Score=95.93 Aligned_cols=55 Identities=20% Similarity=0.384 Sum_probs=50.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEEeCCCchh
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
...+||++.+|+.+++.+|++|++|+||||..+ |+-+|+++||..+.|.+|-...
T Consensus 177 ~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rp 232 (262)
T KOG3040|consen 177 TVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRP 232 (262)
T ss_pred EEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCC
Confidence 346899999999999999999999999999997 9999999999999998876543
No 119
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=99.03 E-value=1.3e-09 Score=91.40 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=64.4
Q ss_pred Ccc-CccHHHHHHHHHHcCCeEEEEeCCChh-------hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 178 VEP-RPGVLRLMDEAKAAGKKVAVCSAATKS-------SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 178 ~~~-~pgv~~~l~~Lk~~g~~v~ivTn~~~~-------~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
+.. .|++.+.|++|.+.||+++|+||...- ....+.+++..+-.- ++..+. ++
T Consensus 27 ~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~--l~ip~~-----------------~~ 87 (159)
T PF08645_consen 27 WKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE--LGIPIQ-----------------VY 87 (159)
T ss_dssp GEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH--CTS-EE-----------------EE
T ss_pred hhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH--cCCceE-----------------EE
Confidence 344 458999999999999999999996321 222222222111000 111111 12
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHcCC----CCCcEEEEecC-----------HhhHHHHHHcCCeEE
Q 019226 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGI----SEKDCLVVEDS-----------VIGLQAATRAGMACV 303 (344)
Q Consensus 250 ~~~~~~~~~~~~KP~~~~~~~~~~~lgv----~~~~~i~vGDs-----------~~Di~~a~~aG~~~v 303 (344)
+|++. -..+||.+-|++.+++.++. +.++++||||. -.|.+-|.++|++..
T Consensus 88 ~a~~~---d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 88 AAPHK---DPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp ECGCS---STTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred ecCCC---CCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 22222 26799999999999999874 89999999996 579999999999853
No 120
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.00 E-value=9.7e-09 Score=92.95 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=52.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
+..+-.|...++.+++.+|++++++++|||+.||++|++.+|+.+++- .........++++.++..+
T Consensus 183 ~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~---na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 183 TAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG---NADEELKALADYVTDSNNE 249 (256)
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec---CchHHHHHhCCEEecCCCC
Confidence 445667899999999999999999999999999999999999997763 2233333446677665443
No 121
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.96 E-value=6.5e-09 Score=91.92 Aligned_cols=43 Identities=14% Similarity=-0.010 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
+-.++.....+++++|++++++++|||+.||++|.+.+|...+
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 3346678999999999999999999999999999999998865
No 122
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.96 E-value=7.1e-09 Score=93.53 Aligned_cols=54 Identities=17% Similarity=0.121 Sum_probs=46.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
+.+..+.++...++.+++++|+++++|++|||+.||++|++.+|..++.+.+..
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 445678899999999999999999999999999999999999776666665443
No 123
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.95 E-value=6.4e-09 Score=89.55 Aligned_cols=98 Identities=18% Similarity=0.341 Sum_probs=61.4
Q ss_pred ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCC
Q 019226 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQK 261 (344)
Q Consensus 182 pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (344)
|++.++|+.+++.|++++|+|++....++.+++.+ ++.... +++. . +...+|....++.. +...+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~-~i~~~~----v~~~--~-~~~~~~~~~~~~~~-----~~~~~-- 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL-GIDDDN----VIGN--E-LFDNGGGIFTGRIT-----GSNCG-- 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT-TSSEGG----EEEE--E-EECTTCCEEEEEEE-----EEEES--
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCceE----EEEE--e-eeecccceeeeeEC-----CCCCC--
Confidence 55559999999999999999999999999998876 655421 2220 0 00000000000000 00000
Q ss_pred CCCHHHHHHH---HHHcCCCCCcEEEEecCHhhHHHHH
Q 019226 262 KPDPSIYVTA---AKRLGISEKDCLVVEDSVIGLQAAT 296 (344)
Q Consensus 262 KP~~~~~~~~---~~~lgv~~~~~i~vGDs~~Di~~a~ 296 (344)
-+...+..+ ... ++..+.+++|||+.+|+.|++
T Consensus 157 -~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 -GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp -HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred -cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 145555555 334 888999999999999999875
No 124
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.95 E-value=1.6e-08 Score=91.33 Aligned_cols=87 Identities=20% Similarity=0.293 Sum_probs=62.5
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHH---HHHHHhhccchhcccceeecccchhhhhccCCcCCccccccc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA 252 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~---~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
....++||+.++|+.|+++|++++++||....... ..++.+ ++... ..+.++.
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~-Gi~~~-~~d~lll---------------------- 170 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF-GFPQA-DEEHLLL---------------------- 170 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc-CcCCC-CcceEEe----------------------
Confidence 44689999999999999999999999998754433 445554 54432 1344444
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 295 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a 295 (344)
.++ .++++.....+.+..++ +++|||..+|+...
T Consensus 171 --r~~---~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 --KKD---KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred --CCC---CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 322 35667777778776666 89999999999654
No 125
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.93 E-value=5.6e-09 Score=93.40 Aligned_cols=49 Identities=16% Similarity=0.117 Sum_probs=44.3
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+.+..+++|+..++.+++++|++++++++|||+.||+.|++.+|...++
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 3456678999999999999999999999999999999999999988765
No 126
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.93 E-value=1.4e-09 Score=97.21 Aligned_cols=66 Identities=21% Similarity=0.183 Sum_probs=52.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
..+-.+..+.+.+++.+|++++++++|||+.||++|.+.+|...++ ++...+....++++.++-.+
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am---~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM---GNATPELKKAADYITPSNND 247 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE---TTS-HHHHHHSSEEESSGTC
T ss_pred eCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE---cCCCHHHHHhCCEEecCCCC
Confidence 3455678999999999999999999999999999999999999776 44444444556777776554
No 127
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.89 E-value=1.1e-09 Score=88.63 Aligned_cols=82 Identities=17% Similarity=0.304 Sum_probs=69.4
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
-++.|.+.|++++|+|+.+...++.-.+.+ ++..+ +. | .+.+-.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~L-GI~~~------~q------------------------G-----~~dK~~ 86 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDL-GIKHL------YQ------------------------G-----ISDKLA 86 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHc-CCcee------ee------------------------c-----hHhHHH
Confidence 456778889999999999999999999987 65443 33 2 234568
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.|..+++++++.+++|.||||..+|+.+..+.|..++.
T Consensus 87 a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~ 124 (170)
T COG1778 87 AFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV 124 (170)
T ss_pred HHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc
Confidence 89999999999999999999999999999999999764
No 128
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.87 E-value=5.8e-09 Score=94.15 Aligned_cols=49 Identities=18% Similarity=0.405 Sum_probs=43.5
Q ss_pred ccC-ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeec
Q 019226 179 EPR-PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA 230 (344)
Q Consensus 179 ~~~-pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~ 230 (344)
++. ||+.++|++|+++|++++|+|++.+..+...++.+ ++..+ |+.+++
T Consensus 145 ~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l-GLd~Y--FdvIIs 194 (301)
T TIGR01684 145 RIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV-KLDRY--FDIIIS 194 (301)
T ss_pred ccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc-CCCcc--cCEEEE
Confidence 344 89999999999999999999999999999999997 88876 677777
No 129
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.85 E-value=9.3e-08 Score=79.46 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=74.9
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccc-cCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA-HQG 255 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 255 (344)
.+.+.||..++++.+++++++++|+|++-...++.+++.+.+-++....|.+.. |-...|..-..|- +-.
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn---------~~~ih~dg~h~i~~~~d 141 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSN---------NDYIHIDGQHSIKYTDD 141 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeec---------CceEcCCCceeeecCCc
Confidence 378999999999999999999999999999999999999876666533333322 1111111111220 011
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
+..++.|| . ..+.+.-+++.++|.||+..|+.+|+....-+
T Consensus 142 s~fG~dK~--~----vI~~l~e~~e~~fy~GDsvsDlsaaklsDllF 182 (220)
T COG4359 142 SQFGHDKS--S----VIHELSEPNESIFYCGDSVSDLSAAKLSDLLF 182 (220)
T ss_pred cccCCCcc--h----hHHHhhcCCceEEEecCCcccccHhhhhhhHh
Confidence 22334443 2 34455556777999999999999998876543
No 130
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.78 E-value=3e-08 Score=86.50 Aligned_cols=46 Identities=20% Similarity=0.096 Sum_probs=42.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
++.+.+|+..++.++++++++++++++|||+.||+.|++.+|+..+
T Consensus 158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 4567889999999999999999999999999999999999999865
No 131
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.73 E-value=2.2e-07 Score=84.14 Aligned_cols=50 Identities=10% Similarity=-0.021 Sum_probs=43.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCC--CCcEEEEecCHhhHHHHHHcCCeEEEEeC
Q 019226 258 VKQKKPDPSIYVTAAKRLGIS--EKDCLVVEDSVIGLQAATRAGMACVITYT 307 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~--~~~~i~vGDs~~Di~~a~~aG~~~v~v~~ 307 (344)
+..+-.+....+.+++.+|++ .+++++|||+.||+.|.+.+|...++-+.
T Consensus 171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 344567788899999999999 99999999999999999999999887543
No 132
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.67 E-value=1.1e-07 Score=95.70 Aligned_cols=106 Identities=16% Similarity=0.178 Sum_probs=76.8
Q ss_pred CccCccHHHHHHHHHHcC-CeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g-~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+.|+++| ++++++||.....++..++++ ++..+ +. .
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l-gi~~~------f~------------------------~- 430 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL-GIDEV------HA------------------------E- 430 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh-CCCee------ec------------------------c-
Confidence 469999999999999999 999999999999999999997 65433 22 1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
.. ++++++ ++++++..+++|+||||+.||+.++++||+.+.+ +.........++.++.+
T Consensus 431 ~~--p~~K~~----~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~---g~~~~~~~~~Ad~vi~~ 489 (556)
T TIGR01525 431 LL--PEDKLA----IVKELQEEGGVVAMVGDGINDAPALAAADVGIAM---GAGSDVAIEAADIVLLN 489 (556)
T ss_pred CC--HHHHHH----HHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe---CCCCHHHHHhCCEEEeC
Confidence 01 123333 4455555678999999999999999999965544 33333333456666664
No 133
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.63 E-value=4.3e-07 Score=90.91 Aligned_cols=44 Identities=5% Similarity=-0.049 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEE
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~ 304 (344)
+-.|....+.+++.+|++.++++.| ||+.||+.|.+.+|...++
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 5577899999999999999999998 9999999999999998765
No 134
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.61 E-value=4.2e-07 Score=80.68 Aligned_cols=41 Identities=7% Similarity=-0.010 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHcCC--CCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 263 PDPSIYVTAAKRLGI--SEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 263 P~~~~~~~~~~~lgv--~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
.++.....+++.+++ .+++|++|||+.||+.|.+.+|+..+
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 346667777777765 67799999999999999999999865
No 135
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.56 E-value=2.7e-07 Score=83.52 Aligned_cols=102 Identities=23% Similarity=0.295 Sum_probs=66.4
Q ss_pred ccC-ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCc--CC-cccc-----
Q 019226 179 EPR-PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL--MP-NRVC----- 249 (344)
Q Consensus 179 ~~~-pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~-~~~~----- 249 (344)
++. |++.++|++|+++|++++|+||+.+..+...++.+ ++..+ |+.+++ +|.. .. .+.+
T Consensus 147 ~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l-gL~~y--FDvII~---------~g~i~~k~~~~~~~d~~~ 214 (303)
T PHA03398 147 RIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET-KLEGY--FDIIIC---------GGRKAGEYSRRVIVDNKY 214 (303)
T ss_pred ccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc-CCCcc--ccEEEE---------CCCcccccccceeecccc
Confidence 344 89999999999999999999999999999999997 77766 576666 1111 00 0000
Q ss_pred ---cc-ccCCCCCC--CCCC-CHHHHHHHHHHcCCCC-CcEEEEecCH-hhH
Q 019226 250 ---VC-AHQGDDVK--QKKP-DPSIYVTAAKRLGISE-KDCLVVEDSV-IGL 292 (344)
Q Consensus 250 ---~~-~~~~~~~~--~~KP-~~~~~~~~~~~lgv~~-~~~i~vGDs~-~Di 292 (344)
+. .-+--++. ..-| +|+.....+++.|+.. ..+-.|+|-. ||+
T Consensus 215 ~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 215 KMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred eeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 00 00000111 1233 4788888899999874 5555677766 454
No 136
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.55 E-value=4.2e-07 Score=90.96 Aligned_cols=104 Identities=20% Similarity=0.254 Sum_probs=76.0
Q ss_pred CccCccHHHHHHHHHHcCC-eEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~-~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
-.++||+.+++++|+++|+ +++++||.....++..++++ +++.+ +. .
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l-gi~~~------f~-------------------------~ 408 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL-GIDEV------HA-------------------------E 408 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc-CChhh------hh-------------------------c
Confidence 3688999999999999999 99999999999999999997 66543 11 1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC-Cchhhhcccccccc
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS-STAEQDFKDAIAIY 322 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~l~~~~~~~ 322 (344)
.. +.++ ..++++++...++++||||+.||+.++++||+...+ + .........++.++
T Consensus 409 ~~--p~~K----~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~---g~~~~~~~~~~ad~vl 466 (536)
T TIGR01512 409 LL--PEDK----LEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM---GASGSDVAIETADVVL 466 (536)
T ss_pred cC--cHHH----HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe---CCCccHHHHHhCCEEE
Confidence 11 1222 345566666668999999999999999999975443 3 22223333455555
No 137
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.53 E-value=5.6e-08 Score=81.80 Aligned_cols=98 Identities=12% Similarity=0.142 Sum_probs=80.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch-hcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
+...||+.++|+.|++. +.++|.|++....++.+++.+ +... + ++.++. .+
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l-dp~~~~--f~~~l~------------------------r~ 92 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL-DRGGKV--ISRRLY------------------------RE 92 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH-CcCCCE--EeEEEE------------------------cc
Confidence 67899999999999988 999999999999999999987 4332 3 455555 55
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEe
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~ 306 (344)
+....+|+ |.+.+..+|.++++|++|||++.|+.++..+|+.+....
T Consensus 93 ~~~~~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 93 SCVFTNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred ccEEeCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 55445555 677888899999999999999999999999998876443
No 138
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.53 E-value=5.2e-07 Score=81.04 Aligned_cols=92 Identities=14% Similarity=0.229 Sum_probs=71.8
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHH--HHHHHhhccch-hcccceeecccchhhhhccCCcCCcccccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI--LCLENLIGMER-FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~--~~l~~l~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
...++||+.++|+.|+++|++++++||+.+.... ..++++ ++.. . ++.+++
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~-gl~~~~--~~~Ii~----------------------- 75 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL-GINADL--PEMIIS----------------------- 75 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC-CCCccc--cceEEc-----------------------
Confidence 3578999999999999999999999998877655 566775 6554 3 577776
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
+++... ..+..+++++++++++|++|||+..|++....+|.
T Consensus 76 -s~~~~~-----~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 76 -SGEIAV-----QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -cHHHHH-----HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 444321 56777778889999999999999999887755544
No 139
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.46 E-value=9.3e-07 Score=88.90 Aligned_cols=104 Identities=14% Similarity=0.207 Sum_probs=74.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++++.|+++|++++++||.....++...+++ +++ ++. +.
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l-gi~-------~~~-------------------------~~ 450 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL-GIN-------VRA-------------------------EV 450 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc-CCc-------EEc-------------------------cC
Confidence 358999999999999999999999999999999999887 653 222 11
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccC
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP 323 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~ 323 (344)
. ++++.+.+ +++..++++|+||||+.||+.++++||+...+ +.........++.++.
T Consensus 451 ~--p~~K~~~v----~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~---g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 451 L--PDDKAALI----KELQEKGRVVAMVGDGINDAPALAQADVGIAI---GAGTDVAIEAADVVLM 507 (562)
T ss_pred C--hHHHHHHH----HHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe---CCcCHHHHhhCCEEEe
Confidence 1 23344444 44444678999999999999999999986433 2222233344566664
No 140
>PLN02382 probable sucrose-phosphatase
Probab=98.41 E-value=4.1e-06 Score=80.92 Aligned_cols=47 Identities=17% Similarity=0.139 Sum_probs=40.4
Q ss_pred CCCCCCCHHHHHHHHHHc---CCCCCcEEEEecCHhhHHHHHHcC-CeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAG-MACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~l---gv~~~~~i~vGDs~~Di~~a~~aG-~~~v~ 304 (344)
+..+-.|...++.+++++ |++++++++|||+.||++|.+.+| ...++
T Consensus 170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam 220 (413)
T PLN02382 170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV 220 (413)
T ss_pred EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE
Confidence 344556789999999999 999999999999999999999999 56554
No 141
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.36 E-value=3.8e-06 Score=75.56 Aligned_cols=68 Identities=13% Similarity=-0.080 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc-------CCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA-------GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a-------G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
|...+..+++++++.++++++|||+.+|+.|++.+ |..++.+..+. ....+.+++++ +.++.++
T Consensus 168 Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~----~~~~A~~~~~~-----~~~v~~~ 238 (244)
T TIGR00685 168 KGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS----KKTVAKFHLTG-----PQQVLEF 238 (244)
T ss_pred HHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC----cCCCceEeCCC-----HHHHHHH
Confidence 46999999999999999999999999999999999 66677775332 12235666664 4556666
Q ss_pred HHHh
Q 019226 337 LQNV 340 (344)
Q Consensus 337 l~~~ 340 (344)
|+.+
T Consensus 239 L~~l 242 (244)
T TIGR00685 239 LGLL 242 (244)
T ss_pred HHHH
Confidence 6544
No 142
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=98.36 E-value=1.1e-05 Score=69.57 Aligned_cols=124 Identities=16% Similarity=0.177 Sum_probs=89.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
..++++.+.++..+..|++++|.|.+.....+.++.+- +-.. .-.++. |. +....
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s-~~gd---l~~y~~----------gy-----------fDt~i 177 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYS-DAGD---LRKYIS----------GY-----------FDTTI 177 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHccc-Ccch---HHHHhh----------hh-----------hhccc
Confidence 78999999999999999999999999988666665543 1111 111121 00 01122
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc--cccccccCCcccc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV 328 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l--~~~~~~~~~~~~~ 328 (344)
+ .|-....|..+.+.+|.++++++++-|......+|+.+|..+..+.++.+..... ...-.++.+|..+
T Consensus 178 G-~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 178 G-LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL 248 (254)
T ss_pred c-ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence 2 6777899999999999999999999999999999999999998887776643221 2223455555544
No 143
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.33 E-value=4.2e-06 Score=72.33 Aligned_cols=104 Identities=14% Similarity=0.305 Sum_probs=58.2
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChh-------hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKS-------SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~-------~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
..++.||+.++|++|.++|+.+.++|..... .....++++++...+ -+.+++
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~--~~~~~~------------------- 129 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPY--DNLIFT------------------- 129 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHH--CCEEEE-------------------
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCch--heEEEe-------------------
Confidence 4689999999999999999888888776543 223334333222121 122222
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc
Q 019226 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 250 ~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
++ | . .++.+ ++|+|++..+..+...|+.+++...+.+.... ....+.++.|+
T Consensus 130 -----~~-----K--~--------~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei 181 (191)
T PF06941_consen 130 -----GD-----K--T--------LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEI 181 (191)
T ss_dssp -----SS-----G--G--------GC--S----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSH
T ss_pred -----cC-----C--C--------eEecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHH
Confidence 11 1 0 12222 89999999999999999999999877664332 23344455443
No 144
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.32 E-value=4.3e-06 Score=64.51 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=29.6
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++||+.++++.|+++|+++.++||+.........+++
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 68999999999999999999999999866555555554
No 145
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.31 E-value=3.4e-06 Score=88.84 Aligned_cols=88 Identities=17% Similarity=0.252 Sum_probs=71.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.++||+.+.+++|++.|++++++|+.....++.+.+.+ ++.. ++. + -
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l-gi~~------~~~------------------------~-~- 696 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA-GIDE------VIA------------------------G-V- 696 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCCE------EEe------------------------C-C-
Confidence 57899999999999999999999999999888888886 5543 222 1 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
. |+....++++++..+++++||||+.||+.++++||+...+
T Consensus 697 ---~--p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~ 737 (834)
T PRK10671 697 ---L--PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737 (834)
T ss_pred ---C--HHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe
Confidence 1 2334567777887889999999999999999999996554
No 146
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.30 E-value=4.2e-06 Score=65.88 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=85.0
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
-++|+.+.+.+++|++. +.++|.|+.....+....+.. +++. +.+..
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~-gi~~----~rv~a--------------------------- 75 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFV-GIPV----ERVFA--------------------------- 75 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHc-CCce----eeeec---------------------------
Confidence 47999999999999999 999999998887777777665 4322 22322
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
--+++.-..+++.|+-+-+.|+||||+.||+.+.++|....+.+-........+..++.++.+
T Consensus 76 ----~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 76 ----GADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred ----ccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 234677889999998888999999999999999999999877666555544445566666654
No 147
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.29 E-value=1.5e-05 Score=70.31 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=30.2
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS 208 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~ 208 (344)
....+.|++.++++.|+++|++|+++||.....
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 456899999999999999999999999998765
No 148
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.27 E-value=5.3e-06 Score=74.71 Aligned_cols=51 Identities=20% Similarity=0.188 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+.+--|....+.+++++++++++++++|||.||+.|. ..+...|.|.+...
T Consensus 161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQP 211 (247)
T ss_dssp ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-H
T ss_pred cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCCH
Confidence 3444568999999999999999999999999999999 67777777754433
No 149
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.27 E-value=9e-07 Score=78.66 Aligned_cols=41 Identities=29% Similarity=0.366 Sum_probs=32.9
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
....+.||+.++++.++++|++|+++||.........++.|
T Consensus 112 ~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL 152 (229)
T PF03767_consen 112 GKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL 152 (229)
T ss_dssp TGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH
T ss_pred ccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH
Confidence 34589999999999999999999999998766544444444
No 150
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.26 E-value=1.9e-05 Score=71.70 Aligned_cols=50 Identities=10% Similarity=-0.091 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 261 KKPDPSIYVTAAKRLGIS--EKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~--~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.-++....+.+.+.+.-. +-.++.+||++||+.|...+-...| |.++...
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vv-i~~~~~~ 257 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVV-LPSPIAD 257 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEE-ecCCCCC
Confidence 345677777777776543 4478889999999999999999965 5555443
No 151
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.25 E-value=7.1e-06 Score=64.55 Aligned_cols=80 Identities=18% Similarity=0.305 Sum_probs=63.9
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.+.++|.|.+++..+|..|+-+..+|=+....+.+.++.+ ++..+ |+..+.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral-~~~~y--Fhy~Vi-------------------------- 89 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL-DLLQY--FHYIVI-------------------------- 89 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh-chhhh--EEEEEe--------------------------
Confidence 4789999999999999999999999998988898999987 77777 576655
Q ss_pred CCCCCCCCH---HHHHHHHHHc------CCCCCcEEEEecCHh
Q 019226 257 DVKQKKPDP---SIYVTAAKRL------GISEKDCLVVEDSVI 290 (344)
Q Consensus 257 ~~~~~KP~~---~~~~~~~~~l------gv~~~~~i~vGDs~~ 290 (344)
+|.| .|+.++++.+ .+.|.+++|++|..-
T Consensus 90 -----ePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~i 127 (164)
T COG4996 90 -----EPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRI 127 (164)
T ss_pred -----cCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccc
Confidence 4443 4455555543 467999999999874
No 152
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.20 E-value=2.2e-05 Score=70.55 Aligned_cols=41 Identities=22% Similarity=0.253 Sum_probs=33.5
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
...++.|++.++.+.++++|++|+++||.+...-....++|
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL 182 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL 182 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 45689999999999999999999999999875444444444
No 153
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.19 E-value=4.5e-05 Score=69.48 Aligned_cols=71 Identities=11% Similarity=0.068 Sum_probs=50.3
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc----CCeEEEEeCCCchhhhccccccccCCccccCHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA----GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 334 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a----G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 334 (344)
..+..|.....++++.+|+..+++++|||+.||..|.+.+ |.. |.+.... ..+.+.+++ +.++.
T Consensus 170 p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vavg~a~------~~A~~~l~~-----~~~v~ 237 (266)
T PRK10187 170 PRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKVGTGA------TQASWRLAG-----VPDVW 237 (266)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEECCCC------CcCeEeCCC-----HHHHH
Confidence 3445678999999999999999999999999999999988 555 4443332 124555554 44455
Q ss_pred HHHHHhh
Q 019226 335 LLLQNVV 341 (344)
Q Consensus 335 ~ll~~~~ 341 (344)
.+|+.+.
T Consensus 238 ~~L~~l~ 244 (266)
T PRK10187 238 SWLEMIT 244 (266)
T ss_pred HHHHHHH
Confidence 5554443
No 154
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.17 E-value=8.5e-06 Score=86.24 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=78.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
+++||+.+.++.|++.|+++.++|+.....+..+.+.+ ++... .+.+++- ..+..+.+.++. -++ ....
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~-Gi~~~--~~~~v~g-~~l~~~~~~~l~---~~~----~~~~ 596 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL-GMPSK--TSQSVSG-EKLDAMDDQQLS---QIV----PKVA 596 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCC--CCceeEh-HHhHhCCHHHHH---HHh----hcCe
Confidence 57899999999999999999999999999999999887 66543 2223220 000000000000 000 0001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+..|+-...+.+.+....+.+.|+||+.||+.++++|++...+
T Consensus 597 Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~ 642 (884)
T TIGR01522 597 VFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM 642 (884)
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec
Confidence 2355677777888887776678999999999999999999976544
No 155
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.13 E-value=8.1e-06 Score=84.67 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=66.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.++||+.+.+++|++.|++++++|+.+...++.+.+++ +++.+ ....
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l-gi~~~--------------------------------~~~~ 614 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL-GIDFR--------------------------------AGLL 614 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCee--------------------------------cCCC
Confidence 68899999999999999999999999999999999987 65321 1111
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+..| ++ ++++++ ..++|+||||+.||..+++.|++...+
T Consensus 615 p~~K--~~----~v~~l~-~~~~v~mvGDgiNDapAl~~A~vgia~ 653 (741)
T PRK11033 615 PEDK--VK----AVTELN-QHAPLAMVGDGINDAPAMKAASIGIAM 653 (741)
T ss_pred HHHH--HH----HHHHHh-cCCCEEEEECCHHhHHHHHhCCeeEEe
Confidence 1112 22 444454 346899999999999999999977655
No 156
>PTZ00174 phosphomannomutase; Provisional
Probab=98.13 E-value=2.4e-06 Score=76.94 Aligned_cols=47 Identities=6% Similarity=-0.149 Sum_probs=39.1
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEe
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITY 306 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGD----s~~Di~~a~~aG~~~v~v~ 306 (344)
+-+..+-.|....+.++++ ++++++||| +.||++|.+.+|..++.|.
T Consensus 181 eI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 3345566678899999888 599999999 8999999999888877776
No 157
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=98.12 E-value=0.00021 Score=64.37 Aligned_cols=126 Identities=12% Similarity=0.106 Sum_probs=78.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeec-c-cchhh--hhccCCcCCcccccccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA-D-CQSYV--LMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~-~-~~~~~--~~~~~~~~~~~~~~~~~ 253 (344)
...-+++.++++.|+++|+++..+|.....+....++.|..++ ++..-+ + ..+++ ...+... .+..+. .
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~g----i~fs~~~~~~~~~~~~~~~~~~~--~~~~~~-~ 152 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLG----IDFSSSSFPEDGIISFPVFDSAL--SRAPSF-Y 152 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCC----CCccccccccCcceecccccCCC--CCCcee-e
Confidence 3566899999999999999999999999888777777763221 111111 0 00000 0000000 000000 0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH----HcCCeEEEEeCCCc
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT----RAGMACVITYTSST 310 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~----~aG~~~v~v~~~~~ 310 (344)
.|--...+-++..++..++.++|..|+.+|||+|+..++.... ..|+...++.....
T Consensus 153 ~GIlft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 153 DGILFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred cCeEEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 0000223567789999999999999999999999998776544 45888877754443
No 158
>PLN02423 phosphomannomutase
Probab=98.04 E-value=1.9e-06 Score=77.57 Aligned_cols=50 Identities=4% Similarity=-0.158 Sum_probs=38.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEeCCCchh
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGD----s~~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
+..+-.|...++.++ +++++++||| +.||++|.+.-|..++-|.++..+.
T Consensus 184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~ 237 (245)
T PLN02423 184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTR 237 (245)
T ss_pred eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHH
Confidence 444555566666665 8999999999 7999999998899998887654443
No 159
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.02 E-value=4.9e-05 Score=63.54 Aligned_cols=108 Identities=14% Similarity=0.138 Sum_probs=61.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHH---HHHHHhhccc-hhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLIGME-RFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~---~~l~~l~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
...|++.+++++++++|++++++|+....... ..++.+.... .+. ...++. .||.+.+. +
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp-~g~li~--------~~g~~~~~---~---- 90 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLP-HGPVLL--------SPDRLFAA---L---- 90 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-CceEEE--------cCCcchhh---h----
Confidence 35689999999999999999999999877664 3343320000 111 012222 23322100 0
Q ss_pred CCCCCCCCC---CHHHHHHHHHHcCCCCCcE-EEEecCHhhHHHHHHcCCeE
Q 019226 255 GDDVKQKKP---DPSIYVTAAKRLGISEKDC-LVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 255 ~~~~~~~KP---~~~~~~~~~~~lgv~~~~~-i~vGDs~~Di~~a~~aG~~~ 302 (344)
..++...+| +.+....+.+.+.-.-... +.+||+.+|+++=+++|+..
T Consensus 91 ~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 91 HREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred hcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 112223344 3444445444443222233 34788899999999999974
No 160
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.86 E-value=7.1e-05 Score=79.62 Aligned_cols=133 Identities=17% Similarity=0.198 Sum_probs=82.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc---eeecccchhhhhccCCcCCccccccccCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD---CFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
++.||+.+.++.|++.|++++++|+.....+..+.+.+ ++..-. .+ ..+. -..+..+.+-.+ ...+ .
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~-gi~~~~-~~v~~~~~~-g~~l~~~~~~~~----~~~~---~ 606 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI-GIFSPD-EDVTFKSFT-GREFDEMGPAKQ----RAAC---R 606 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc-CCCCCC-ccccceeee-HHHHhhCCHHHH----HHhh---h
Confidence 47999999999999999999999999988888888887 553211 11 1111 000000000000 0000 0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
.....++-.|+--..+++.++-..+.+.|+||+.||+.|.+.|++...+ .++ .......+++++.+
T Consensus 607 ~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~-g~g--~~~ak~aAD~vl~d 672 (917)
T TIGR01116 607 SAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM-GSG--TEVAKEASDMVLAD 672 (917)
T ss_pred cCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC-CCC--cHHHHHhcCeEEcc
Confidence 1112244556666777777776678888999999999999999997654 222 22223346666655
No 161
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.75 E-value=0.00015 Score=70.31 Aligned_cols=122 Identities=16% Similarity=0.240 Sum_probs=75.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc------chhcccceeecccc--hhh---------hhcc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM------ERFEGLDCFLADCQ--SYV---------LMTN 240 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~------~~~~~~d~~~~~~~--~~~---------~~~~ 240 (344)
+...|.+..+|+.||++|.++.++||+.-..+..++..+.|- +.-.-||.+|.-+. .|- ..++
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 456789999999999999999999999999999999999776 55455788776221 110 0011
Q ss_pred CCcCCccccccccCCCCCCCCCC----CHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHc-CCeEEEEeCC
Q 019226 241 GTLMPNRVCVCAHQGDDVKQKKP----DPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRA-GMACVITYTS 308 (344)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~KP----~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~a-G~~~v~v~~~ 308 (344)
|.+.+ +..++.-++ ..--...+.+.+|....+|++|||+.. |+...+.. ||+|+.|-..
T Consensus 262 g~l~~---------~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 262 GKLKW---------GKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp SSEEC---------S---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred Ccccc---------ccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 11111 000111111 123356777888999999999999995 99988887 9999988643
No 162
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.69 E-value=0.00018 Score=73.23 Aligned_cols=88 Identities=13% Similarity=0.196 Sum_probs=67.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.||+.+.+++|++.|+++.++|+.+...+....+.+ +++. ++. .
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l-GI~~------v~a-------------------------~-- 491 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA-GVDD------FIA-------------------------E-- 491 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCE------EEc-------------------------C--
Confidence 57899999999999999999999999999999999887 6543 332 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.. |+-...+.+++.-..+.+.|+||+.||..+.++|+....+
T Consensus 492 --~~--PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm 533 (675)
T TIGR01497 492 --AT--PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAM 533 (675)
T ss_pred --CC--HHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 12 2323333333333345799999999999999999999765
No 163
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.68 E-value=0.002 Score=63.70 Aligned_cols=99 Identities=17% Similarity=0.136 Sum_probs=57.0
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCccccccccCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 258 (344)
+.+++.+ .++++|.. +|+|.+.+..++...+...++ |.+++ .-+++ .+|.+- |.-.
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGi------d~VIg---TeLev~~~G~~T----------G~i~ 167 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGA------DKVLG---TELEVSKSGRAT----------GFMK 167 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCC------CEEEe---cccEECcCCEEe----------eeec
Confidence 5555544 44567754 999999999999888763254 44443 11222 133330 1111
Q ss_pred CCCCC-CHH-HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 259 KQKKP-DPS-IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 259 ~~~KP-~~~-~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
+ ..+ ..+ -...+.+.+|.+... +++||+.+|..+...++-..+
T Consensus 168 g-~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 168 K-PGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred C-CCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 1 001 111 122233556655444 899999999999999998754
No 164
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.65 E-value=0.00028 Score=58.71 Aligned_cols=100 Identities=17% Similarity=0.146 Sum_probs=61.0
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
|.+-++.++.-..++|-+++.+|+.....++.+-..| ...+.++.... ++| ..+-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~L---ak~F~i~~m~p-----------------v~f----~Gdk- 169 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTL---AKNFHITNMNP-----------------VIF----AGDK- 169 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhH---HhhcccCCCcc-----------------eee----ccCC-
Confidence 4445677888888899999999998776555544433 11111121111 111 2221
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
.||...--..+++..++ -+|.||+-+|+.+|+.+|.+.+-+.+..
T Consensus 170 -~k~~qy~Kt~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRilRAa 214 (237)
T COG3700 170 -PKPGQYTKTQWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRAA 214 (237)
T ss_pred -CCcccccccHHHHhcCc----eEEecCCchhhhHHHhcCccceeEEecC
Confidence 13333333345555555 4899999999999999999998775543
No 165
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.63 E-value=0.0006 Score=70.92 Aligned_cols=69 Identities=10% Similarity=-0.035 Sum_probs=47.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC--eEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM--ACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~--~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
.+-.|....+.+++ +++++.+++|||+.||..|.+.++. -+|.+... ...+.+.+++. +++.++|
T Consensus 654 ~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~------~s~A~~~l~~~-----~eV~~~L 720 (726)
T PRK14501 654 AGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG------ESRARYRLPSQ-----REVRELL 720 (726)
T ss_pred CCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC------CCcceEeCCCH-----HHHHHHH
Confidence 34457888888888 7788999999999999999998742 23333221 13456777664 4566666
Q ss_pred HHhh
Q 019226 338 QNVV 341 (344)
Q Consensus 338 ~~~~ 341 (344)
+.+.
T Consensus 721 ~~l~ 724 (726)
T PRK14501 721 RRLL 724 (726)
T ss_pred HHHh
Confidence 6554
No 166
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.60 E-value=0.00039 Score=71.16 Aligned_cols=88 Identities=19% Similarity=0.268 Sum_probs=69.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.|+..+.+++||+.|+++.++|+.+...++.+.+++ |++++ +. +-.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l-GId~v------~A-------------------------ell 584 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL-GIDEV------RA-------------------------ELL 584 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-ChHhh------ec-------------------------cCC
Confidence 58899999999999999999999999999999999997 76554 22 111
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+-.....+++.-.-+.+.||||+.||..+..+|-....+
T Consensus 585 ------PedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm 624 (713)
T COG2217 585 ------PEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM 624 (713)
T ss_pred ------cHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee
Confidence 2333445555554447899999999999999999888655
No 167
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.57 E-value=0.00037 Score=71.17 Aligned_cols=89 Identities=15% Similarity=0.225 Sum_probs=69.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.||+.+.+++||+.|+++.++|+.+...+..+.+++ |++. ++. .
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GId~------v~A-------------------------~-- 490 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA-GVDD------FLA-------------------------E-- 490 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCcE------EEc-------------------------c--
Confidence 46899999999999999999999999999999998887 6543 332 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
. .|+-...+.+++.-.-+-+.|+||+.||..+.++|.....+-
T Consensus 491 --~--~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 533 (679)
T PRK01122 491 --A--TPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 533 (679)
T ss_pred --C--CHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC
Confidence 1 234444555555444467899999999999999999987663
No 168
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.53 E-value=0.00074 Score=64.60 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=71.1
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
+|......+..|+++|+-++|+|-++...++++++.+. |.++.- .++..-..
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp--------~MiLke--------------------edfa~~~i 307 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP--------DMILKE--------------------EDFAVFQI 307 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC--------CeEeeH--------------------hhhhhhee
Confidence 33344567788999999999999999999999998872 223220 00011123
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
.+-|+.+.+++++++||+-.+..+|++|++...+-.++-+-
T Consensus 308 NW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 308 NWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred cCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 47899999999999999999999999999998888888776
No 169
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.49 E-value=0.00083 Score=68.57 Aligned_cols=89 Identities=13% Similarity=0.248 Sum_probs=70.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.||+.+.+++||+.|+++..+|+.+...+..+.+++ |+++ ++. .
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GI~~------v~A-------------------------~-- 486 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA-GVDR------FVA-------------------------E-- 486 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCce------EEc-------------------------C--
Confidence 58899999999999999999999999999999999887 6543 222 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
. .|+-...+.+.+.-.-+.+.|+||+.||..+.++|.....+-
T Consensus 487 --~--~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 487 --C--KPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred --C--CHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 1 244445555555544467889999999999999999987653
No 170
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.42 E-value=0.00011 Score=61.39 Aligned_cols=85 Identities=22% Similarity=0.310 Sum_probs=53.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+...||+.++|+.+.+. +.++|.|.+....+..+++.+..-..+ ++.++. .++
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~--~~~~~~------------------------r~~ 87 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKL--FSRRLY------------------------RDD 87 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSS--EEEEEE------------------------GGG
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccc--cccccc------------------------ccc
Confidence 57899999999999766 999999999999999999998321222 344444 222
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGL 292 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di 292 (344)
....+- .+.+-++.+|.+.+++++|+|++.-.
T Consensus 88 ~~~~~~---~~~KdL~~l~~~~~~vvivDD~~~~~ 119 (159)
T PF03031_consen 88 CTFDKG---SYIKDLSKLGRDLDNVVIVDDSPRKW 119 (159)
T ss_dssp SEEETT---EEE--GGGSSS-GGGEEEEES-GGGG
T ss_pred cccccc---ccccchHHHhhccccEEEEeCCHHHe
Confidence 110010 01145566677899999999999743
No 171
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.41 E-value=0.00042 Score=73.44 Aligned_cols=113 Identities=12% Similarity=0.104 Sum_probs=73.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+ |+.. +.+++ -..+..+++.++. -.+ ....
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~----~~v~~-G~el~~l~~~el~---~~~---~~~~- 616 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV-GLDA----GEVLI-GSDIETLSDDELA---NLA---ERTT- 616 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCc----cCcee-HHHHHhCCHHHHH---HHH---hhCc-
Confidence 57899999999999999999999999999999999887 6642 22222 0000000000000 000 0001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+-...+.+.+.-.-+.+.|+||+.||..+.++|.++..+
T Consensus 617 VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm 662 (902)
T PRK10517 617 LFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV 662 (902)
T ss_pred EEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe
Confidence 1133445555666666654457788999999999999999999765
No 172
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.39 E-value=0.00058 Score=72.26 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=71.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.+++|++.|+++.++|+.....+..+.+++ |+.. +.++. -..+....+.++. -.+ ....
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l-GI~~----~~v~~-g~~l~~~~~~el~---~~~----~~~~ 581 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV-GIDA----NDFLL-GADIEELSDEELA---REL----RKYH 581 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCC----CCeee-cHhhhhCCHHHHH---HHh----hhCe
Confidence 47889999999999999999999999999999988887 6642 11222 0000000000000 000 0000
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+-...+.+.+.-.-+.+.|+||+.||..+.+.|..+..+
T Consensus 582 vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm 627 (867)
T TIGR01524 582 IFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV 627 (867)
T ss_pred EEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe
Confidence 1122344444555555544446788999999999999999999765
No 173
>PLN02645 phosphoglycolate phosphatase
Probab=97.36 E-value=0.0011 Score=61.69 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=64.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhh--ccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI--GMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.++||+.++|+.|+++|++++++||+........++++. |+... .+.+++ +
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~--~~~I~t------------------------s- 96 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT--EEEIFS------------------------S- 96 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCC--hhhEee------------------------h-
Confidence 578999999999999999999999998665555554431 33221 344443 1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.......++..+....+.++|+++..+.+.++.+|+.++.
T Consensus 97 --------~~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 97 --------SFAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred --------HHHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 1244555566666545568888888999999999998764
No 174
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.35 E-value=0.00062 Score=72.74 Aligned_cols=115 Identities=15% Similarity=0.103 Sum_probs=71.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+ ++..-. ..+++- ..+....+.++. .++ ....
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~-GI~~~~--~~vi~G-~~~~~l~~~el~---~~i----~~~~ 647 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC-GILTFG--GLAMEG-KEFRRLVYEEMD---PIL----PKLR 647 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc-CCCCCC--ceEeeH-HHhhhCCHHHHH---HHh----ccCe
Confidence 57889999999999999999999999999999998887 654211 122220 000000000000 000 0001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+-...+.+.+.-.-+.+.|+||+.||..|.++|-.+..+
T Consensus 648 Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 648 VLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec
Confidence 1123345555555555544446789999999999999999888654
No 175
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.30 E-value=0.00076 Score=71.61 Aligned_cols=113 Identities=15% Similarity=0.109 Sum_probs=73.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.+++|++.|+++.++|+.....+..+.+.+ |+.. +.+++ -..+..+.+.++. -.+ ....
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l-GI~~----~~vi~-G~el~~~~~~el~---~~v---~~~~- 616 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV-GLEP----GEPLL-GTEIEAMDDAALA---REV---EERT- 616 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCC----CCccc-hHhhhhCCHHHHH---HHh---hhCC-
Confidence 57899999999999999999999999999999999887 6642 12222 0000000000000 000 0001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+--..+.+.+.-.-+.+.|+||+.||..+.++|-.+..+
T Consensus 617 VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 617 VFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred EEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe
Confidence 1133355656666666655557789999999999999999998655
No 176
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.30 E-value=0.0008 Score=53.84 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=26.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSV 209 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~ 209 (344)
.+.+++.+.|+.|+++|+.++++|+......
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 4677888999999999999999999876543
No 177
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.27 E-value=0.0012 Score=68.80 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=72.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh-cccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF-EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++ |+..- ...+.+..- .....+++.++. -.+ ...+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~~~~~~~~l~~~-~~~~~~~~~~~~---~~~---~~~~ 513 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL-GLGTNIYTADVLLKG-DNRDDLPSGELG---EMV---EDAD 513 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCCCcCHHHhcCC-cchhhCCHHHHH---HHH---HhCC
Confidence 57899999999999999999999999999999999997 66431 000001000 000000000000 000 0000
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+-...+.+.+.-.-+.+.|+||+.||..+.++|..+..+
T Consensus 514 -vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 514 -GFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred -EEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 1133345555566666655557799999999999999999998655
No 178
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.26 E-value=0.0019 Score=58.00 Aligned_cols=104 Identities=21% Similarity=0.275 Sum_probs=67.6
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccc---------cc
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRV---------CV 250 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---------~~ 250 (344)
..|.+.+.|.+|++.|.-+++=|-++++++...++.+ ++..+ ||.+++ ++. ..+-.+.+. .+
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~-~L~~~--Fd~ii~--~G~----~~~~~~~~~~~d~~~~~~f~ 213 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL-KLEGY--FDIIIC--GGN----KAGEYNSRVIVDRQYKVIFV 213 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh-CCccc--cEEEEe--CCc----cCCcCCccceeecccceEEe
Confidence 4567888999999999999999999999999999997 88877 798887 111 000011110 00
Q ss_pred cccCCCCCC--CCCC-CHHHHHHHHHHcCCCC-CcEEEEecCH-hhH
Q 019226 251 CAHQGDDVK--QKKP-DPSIYVTAAKRLGISE-KDCLVVEDSV-IGL 292 (344)
Q Consensus 251 ~~~~~~~~~--~~KP-~~~~~~~~~~~lgv~~-~~~i~vGDs~-~Di 292 (344)
..-+--++. .+-| +|+.....+++.|+.. ..+-.|+|-. ||+
T Consensus 214 ~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 214 SKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred ccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 000000111 1134 4788889999999974 4555677766 454
No 179
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=97.20 E-value=0.0049 Score=64.88 Aligned_cols=40 Identities=10% Similarity=-0.052 Sum_probs=33.1
Q ss_pred CCCCCHHHHHHHHH---HcCCCCCcEEEEecCHhhHHHHHHcC
Q 019226 260 QKKPDPSIYVTAAK---RLGISEKDCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 260 ~~KP~~~~~~~~~~---~lgv~~~~~i~vGDs~~Di~~a~~aG 299 (344)
.+-.|....+.+++ .+|+.++.+++|||+.+|..|.+.++
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 34456788888864 46899999999999999999999886
No 180
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.18 E-value=0.0068 Score=50.27 Aligned_cols=104 Identities=15% Similarity=0.179 Sum_probs=60.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccc-c----
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA-H---- 253 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 253 (344)
...+|+.++++.++++||++.-+|.............+..... +|.-.|.+-.+++ .
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q------------------~~~~lP~Gpv~~sP~~l~~ 88 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQ------------------QGHNLPDGPVLLSPDSLFS 88 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHh------------------CCccCCCCCEEECCcchhh
Confidence 4678999999999999999999999887655555444421111 1111122222221 0
Q ss_pred -CCCCCCCCCCCHHHHHHHH-HHc-CCC--CCcE--EEEecCHhhHHHHHHcCCeE
Q 019226 254 -QGDDVKQKKPDPSIYVTAA-KRL-GIS--EKDC--LVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 254 -~~~~~~~~KP~~~~~~~~~-~~l-gv~--~~~~--i~vGDs~~Di~~a~~aG~~~ 302 (344)
...++- .++|+.|...+ +.+ ..- ...- ..+|+...|+.+=+++|+..
T Consensus 89 al~rEvi--~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 89 ALHREVI--SKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred hhhcccc--ccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCCh
Confidence 012332 23454554433 332 221 1222 24799999999999999973
No 181
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=97.18 E-value=0.0061 Score=50.37 Aligned_cols=94 Identities=19% Similarity=0.160 Sum_probs=61.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
....++...|..+++. .+++.+|.......+..-..+ ..... .++....+ |..
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l-~~q~i-h~~~l~i~-----------------------g~h- 124 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWL-FIQNI-HYDHLEIV-----------------------GLH- 124 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHH-HHhcc-chhhhhhh-----------------------ccc-
Confidence 4555677888888887 678888887776555444443 32221 12333221 111
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCch
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.| ..+++.++++ +++.|+. |-++.|+.+|++.+.++++...
T Consensus 125 --~K------V~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynR 166 (194)
T COG5663 125 --HK------VEAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNR 166 (194)
T ss_pred --cc------chhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccc
Confidence 22 4566778776 7889998 6778888899999999988774
No 182
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.16 E-value=0.0049 Score=54.09 Aligned_cols=89 Identities=19% Similarity=0.216 Sum_probs=58.7
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhh-HHHHHHHh--hccchhcccceeecccchhhhhccCCcCCccccccc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS-VILCLENL--IGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA 252 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~-~~~~l~~l--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
....+.||+.++++..-++|.+|..+||.+... ....++.+ .|+.... -+.++-
T Consensus 119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~-~~~~ll---------------------- 175 (274)
T COG2503 119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL-ESHLLL---------------------- 175 (274)
T ss_pred cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc-ccceEE----------------------
Confidence 446899999999999999999999999998776 44444443 1333321 111221
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT 296 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~ 296 (344)
- ...|++..-+..+.+ ..+-++.|||+..|+-...
T Consensus 176 --k---k~~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 176 --K---KDKKSKEVRRQAVEK----DYKIVMLVGDNLDDFGDNA 210 (274)
T ss_pred --e---eCCCcHHHHHHHHhh----ccceeeEecCchhhhcchh
Confidence 1 234566666666655 3456788999998875443
No 183
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.10 E-value=0.0014 Score=54.74 Aligned_cols=79 Identities=14% Similarity=0.249 Sum_probs=58.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc-hhccc-ceeecccchhhhhccCCcCCccccccccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGL-DCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~-~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
+.++||+.++|+.|++. ++++|+|++....+..+++.+ +.. .+ | +.+++ .
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l-dp~~~~--F~~ri~~------------------------r 108 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI-DPDGKY--FGDRIIS------------------------R 108 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh-CcCCCe--eccEEEE------------------------e
Confidence 68999999999999966 999999999999999999997 444 33 4 44554 4
Q ss_pred CCCCCCCCCHHHHHHHH-HHcCCCCCcEEEEecCHh
Q 019226 256 DDVKQKKPDPSIYVTAA-KRLGISEKDCLVVEDSVI 290 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~-~~lgv~~~~~i~vGDs~~ 290 (344)
++.. .+ +.+-+ .-++.+.+.++.|+|++.
T Consensus 109 d~~~--~~----~~KdL~~i~~~d~~~vvivDd~~~ 138 (156)
T TIGR02250 109 DESG--SP----HTKSLLRLFPADESMVVIIDDRED 138 (156)
T ss_pred ccCC--CC----ccccHHHHcCCCcccEEEEeCCHH
Confidence 4332 11 11123 345778999999999985
No 184
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=97.10 E-value=0.0018 Score=60.37 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=36.9
Q ss_pred CccEEEEecCccccccchh------HHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHh
Q 019226 66 SLQALIFDCDGVIIESEHL------HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~------~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 121 (344)
..+.|-||=|+|||+.... +...+.+.+ +.|+.+...+++.+.-...+++.+...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL-~~gv~VgIVTAAGY~~a~kY~~RL~GL 206 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLL-RRGVKVGIVTAAGYPGAEKYEERLHGL 206 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHH-hcCCeEEEEeCCCCCChHHHHHHHHHH
Confidence 8999999999999986432 333333332 457777777777777766666665443
No 185
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.08 E-value=0.002 Score=69.46 Aligned_cols=112 Identities=12% Similarity=0.101 Sum_probs=72.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccc--------ceeecccchhhhhccCCcCC--c--
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--------DCFLADCQSYVLMTNGTLMP--N-- 246 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~--------d~~~~~~~~~~~~~~~~~~~--~-- 246 (344)
++.|++.+.++.|++.|++++++|+.....+..+.+.+ ++..-... ..+++ +..++- .
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~-Gi~~~~~~~~~~~~~~~~vit---------G~~l~~l~~~~ 715 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV-GIIPPNFIHDRDEIMDSMVMT---------GSQFDALSDEE 715 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCCCccccccccccccceeee---------hHHhhhcCHHH
Confidence 57899999999999999999999999999999999887 65321000 11222 000000 0
Q ss_pred c-ccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 247 R-VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 247 ~-~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
. -.+ .......+=.|+--..+.+.+.-.-+.+.|+||+.||..|.+.|..+..+
T Consensus 716 l~~~~----~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm 770 (1053)
T TIGR01523 716 VDDLK----ALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770 (1053)
T ss_pred HHHHh----hcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec
Confidence 0 000 00001133345555555665554457789999999999999999998765
No 186
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.06 E-value=0.0025 Score=60.55 Aligned_cols=124 Identities=16% Similarity=0.225 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH------hCCCccCccHHHHHHHHHHcCCeEEEEeCCC--hhhHHHHHHHhhccchhcccc
Q 019226 155 AKLIDLIQDWKTERYQQIIK------SGTVEPRPGVLRLMDEAKAAGKKVAVCSAAT--KSSVILCLENLIGMERFEGLD 226 (344)
Q Consensus 155 ~~~~~~l~~~~~~~~~~~~~------~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~--~~~~~~~l~~l~~~~~~~~~d 226 (344)
++....+.+.+...++++.. ...+-+.....++++.+.+.|.+|.++|.-- ....+..+... |.+-. .-
T Consensus 69 Deil~~~~q~~p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~-g~d~~--ni 145 (635)
T COG5610 69 DEILNLLQQNFPLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSF-GPDFN--NI 145 (635)
T ss_pred HHHHHHHHhhCcHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhc-CCCcc--Cc
Confidence 34445555555555555432 1123455677899999999999999999864 44556666553 43322 11
Q ss_pred eeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEE
Q 019226 227 CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVIT 305 (344)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~aG~~~v~v 305 (344)
.++. +.+....|.+...|..+++.-++++.+.+|+||+.+ |..+++..|+.|...
T Consensus 146 piY~------------------------S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 146 PIYM------------------------SSEFRLKKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred eeee------------------------cceeehhcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 2344 667777899999999999999999999999999996 999999999998653
No 187
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.79 E-value=0.004 Score=66.30 Aligned_cols=119 Identities=16% Similarity=0.135 Sum_probs=77.6
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
+|.+++.+.++.|+++|+++..+|+.....+..+.+++ |+..-...+.+++ -..+....+.++ .-.+. .-.
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~-Gi~~~~~~~~vi~-G~el~~l~~~el----~~~~~---~~~ 617 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC-GIEAEAESALVID-GAELDALSDEEL----AELVE---ELS 617 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc-CCCCCCCceeEee-hHHhhhcCHHHH----HHHhh---hCc
Confidence 68899999999999999999999999999999999887 6444210012333 000000000000 00000 001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEe
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~ 306 (344)
..++=.|+-..++.+.+.-.-+-+.|.||+.||+.|.++|-++..+..
T Consensus 618 VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 618 VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 224556666666666666556778899999999999999999976654
No 188
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.75 E-value=0.0054 Score=66.06 Aligned_cols=114 Identities=14% Similarity=0.165 Sum_probs=71.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc-----------------------eeecccchh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD-----------------------CFLADCQSY 235 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d-----------------------~~~~~~~~~ 235 (344)
++.|++.+.+++++++|+++.++|+.....+..+.+.+ ++-.-. .+ .+++
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~-gi~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~vi~----- 640 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV-GIISEG-NETVEDIAARLNIPVSQVNPRDAKACVVH----- 640 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCCC-ccchhhhhhhccccccccccccccceEEE-----
Confidence 56889999999999999999999999999999988887 442110 00 1111
Q ss_pred hhhccCCcCC--c--cccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 236 VLMTNGTLMP--N--RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 236 ~~~~~~~~~~--~--~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+..++- . ..-+.. ........+-.|+-...+.+.+.-..+.+.|+||+.||+.|.+.|..+..+
T Consensus 641 ----G~~l~~l~~~el~~~~~-~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 641 ----GSDLKDMTSEQLDEILK-YHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred ----hHHhhhCCHHHHHHHHH-hcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec
Confidence 111100 0 000000 000012234445555555555544446788999999999999999998765
No 189
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=96.57 E-value=0.12 Score=45.57 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
+...|+++.+++|-+.-.-++|||+...-.+|+..+|+++-|......
T Consensus 215 K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~Dl 262 (274)
T TIGR01658 215 KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPDS 262 (274)
T ss_pred hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecCCCH
Confidence 468899999999997788889999999999999999999988766543
No 190
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=96.57 E-value=0.0056 Score=56.35 Aligned_cols=116 Identities=18% Similarity=0.207 Sum_probs=74.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC---
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ--- 254 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 254 (344)
+.-.|....+++.|+++|.++.++||+...+++..+..+-|-+.-..||++|.- -.+ | . +|++..
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvq--------A~K--P-~-Fftde~rPf 306 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQ--------ANK--P-E-FFTDERRPF 306 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEe--------cCC--C-c-ccccccCcc
Confidence 345567889999999999999999999999999998888665544457777651 000 0 0 000000
Q ss_pred --CCC---------CCCCCCCHH----HHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEE
Q 019226 255 --GDD---------VKQKKPDPS----IYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVIT 305 (344)
Q Consensus 255 --~~~---------~~~~KP~~~----~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~-~aG~~~v~v 305 (344)
-++ +..-.|..- .....++--|..-.++++|||.. .|+.... .+||++-.+
T Consensus 307 R~~dek~~sl~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 307 RKYDEKRGSLLWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred hhhcccccchhhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 000 000001111 12334455578889999999998 5999888 899998655
No 191
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.54 E-value=0.0091 Score=61.48 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=66.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.||+...+..||+.|++++.+|+.+...++.+.+++ | ++.++. +.
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V-G------i~~V~a-------------------------ev- 769 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV-G------IDNVYA-------------------------EV- 769 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh-C------cceEEe-------------------------cc-
Confidence 57899999999999999999999999999999999887 4 344543 22
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+| +--....+++.-....+.||||+.||-.+...|.++..+
T Consensus 770 ---~P--~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIai 810 (951)
T KOG0207|consen 770 ---LP--EQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAI 810 (951)
T ss_pred ---Cc--hhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceee
Confidence 22 222333344444447889999999999999999887543
No 192
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.28 E-value=0.0054 Score=53.06 Aligned_cols=38 Identities=16% Similarity=0.039 Sum_probs=24.4
Q ss_pred CCccEEEEecCccccccchhHHHH--HHHHHHhcCCCCCC
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQA--YNDAFSHFNVRCDP 102 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a--~~~~~~~~g~~~~~ 102 (344)
.++.+|+.|+||||++....+.++ +..-+.+.|.++..
T Consensus 5 ~~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~ 44 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVIL 44 (274)
T ss_pred ccceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEE
Confidence 567889999999999943222222 44445567776543
No 193
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=96.27 E-value=0.5 Score=44.33 Aligned_cols=44 Identities=25% Similarity=0.194 Sum_probs=36.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 265 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 265 ~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
-..|+++.+++|- .-.-++|||+...-.+|++..|.++-++...
T Consensus 411 escFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~h~ 454 (468)
T KOG3107|consen 411 ESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISSHS 454 (468)
T ss_pred HHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeeccCc
Confidence 5789999999997 4455678999999999999999998776543
No 194
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.20 E-value=0.085 Score=47.90 Aligned_cols=40 Identities=28% Similarity=0.302 Sum_probs=34.5
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
...++||+.++|+.|+++|.+++++||+.....+...+++
T Consensus 22 G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4589999999999999999999999999887666555555
No 195
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.16 E-value=0.039 Score=54.91 Aligned_cols=85 Identities=16% Similarity=0.190 Sum_probs=63.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+ ++ .. .
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l-gi---------~~-------------------------~-- 389 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL-GI---------FA-------------------------R-- 389 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-Cc---------ee-------------------------c--
Confidence 68899999999999999999999999998888888876 43 11 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
=.|+....+.+++.-....+.|+||+.||..+.+.|+....+
T Consensus 390 ----~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~ 431 (499)
T TIGR01494 390 ----VTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAM 431 (499)
T ss_pred ----cCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCcccc
Confidence 112333344444333337799999999999999999877443
No 196
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.13 E-value=0.46 Score=41.62 Aligned_cols=42 Identities=14% Similarity=0.085 Sum_probs=31.7
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
...++.||+.++++.|.+. ..-+|+|.+.++.++.....+ ++
T Consensus 80 ~sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~i-g~ 121 (315)
T COG4030 80 LSAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMI-GV 121 (315)
T ss_pred hhcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhc-CC
Confidence 3468999999999999987 555667776777777776665 44
No 197
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.12 E-value=0.027 Score=57.68 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=72.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc-ccc-eeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE-GLD-CFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~-~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
+|.+++.+.++.+++.|++|..+|+.+...+..+.+++ |+-... +++ ..++ +.+. +
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~i-Gi~~~~ed~~~~~~T---------G~ef------------D 641 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREI-GIFSEDEDVSSMALT---------GSEF------------D 641 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHh-CCCcCCccccccccc---------hhhh------------h
Confidence 68899999999999999999999999999888888887 432221 001 1111 1110 1
Q ss_pred CC-------------CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 257 DV-------------KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 257 ~~-------------~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
++ ...+-.|+-..++.+.|.-.-+=+.|-||+.||..+.+.|.++..+=
T Consensus 642 ~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG 703 (972)
T KOG0202|consen 642 DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMG 703 (972)
T ss_pred cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeec
Confidence 11 01223455556666666655577889999999999999999987763
No 198
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.05 E-value=0.037 Score=60.19 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=34.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
++.||+.+.++.|++.|++++++|+.....+..+....
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~ 668 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSC 668 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 68899999999999999999999999888888877765
No 199
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.01 E-value=0.027 Score=61.13 Aligned_cols=40 Identities=13% Similarity=0.249 Sum_probs=36.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++ |+
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~-gi 695 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAREC-GI 695 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CC
Confidence 58899999999999999999999999999999988887 55
No 200
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.92 E-value=0.13 Score=47.16 Aligned_cols=89 Identities=15% Similarity=0.164 Sum_probs=56.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh--hccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.++||+.++|++|+++|++++++||+.........+.+ .|+..- .+.+++
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~--~~~i~t-------------------------- 69 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL--AEQLFS-------------------------- 69 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC--hhhEec--------------------------
Confidence 58899999999999999999999997654444433333 132211 122222
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
........+++......+++++|+.. .....+.+|+..+
T Consensus 70 -------s~~~~~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 70 -------SALCAARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred -------HHHHHHHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 22444455555444457799999863 3445567888754
No 201
>PLN02151 trehalose-phosphatase
Probab=95.84 E-value=0.2 Score=47.33 Aligned_cols=70 Identities=11% Similarity=0.054 Sum_probs=42.6
Q ss_pred CCCHHHHHHHHHHcCCCCC---cEEEEecCHhhHHHHHHc-----CCeEEEEeCCCchhhhccccccccCCccccCHHHH
Q 019226 262 KPDPSIYVTAAKRLGISEK---DCLVVEDSVIGLQAATRA-----GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 333 (344)
Q Consensus 262 KP~~~~~~~~~~~lgv~~~---~~i~vGDs~~Di~~a~~a-----G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l 333 (344)
-.|....+.+++.++..-. -.+|+||...|-.|.+.. |+ .|.|..... -..+.+.+++ +.++
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k----~T~A~y~L~d-----p~eV 337 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAK----ETNASYSLQE-----PDEV 337 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCC----CCcceEeCCC-----HHHH
Confidence 3567889999999886532 379999999887776654 33 244432111 1124455544 4566
Q ss_pred HHHHHHhh
Q 019226 334 ELLLQNVV 341 (344)
Q Consensus 334 ~~ll~~~~ 341 (344)
.++|+.+.
T Consensus 338 ~~~L~~L~ 345 (354)
T PLN02151 338 MEFLERLV 345 (354)
T ss_pred HHHHHHHH
Confidence 66666554
No 202
>PLN03190 aminophospholipid translocase; Provisional
Probab=95.78 E-value=0.059 Score=58.89 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=32.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
++.+|+.+.++.|+++|++++++|+.....+..+...
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 6889999999999999999999999887766666554
No 203
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=95.77 E-value=0.066 Score=46.25 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=34.0
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
....|++.++|+.+.+. |.|+|-|.+....++.++..+
T Consensus 44 ~~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred EEeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHh
Confidence 35779999999999995 999999999999999999886
No 204
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=95.68 E-value=0.046 Score=48.74 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=62.4
Q ss_pred HHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCcc
Q 019226 169 YQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNR 247 (344)
Q Consensus 169 ~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~ 247 (344)
..+......+.+.+|+.++++.|.++++++.|+|.+-...++.++++...... .=.+++ |+... ++|.+.
T Consensus 80 i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~---Nv~VvS---N~M~Fd~~g~l~--- 150 (246)
T PF05822_consen 80 IEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHP---NVKVVS---NFMDFDEDGVLV--- 150 (246)
T ss_dssp HHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BT---TEEEEE---E-EEE-TTSBEE---
T ss_pred HHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCC---CeEEEe---eeEEECCcceEe---
Confidence 33444455688999999999999999999999999999999999999722211 223344 55555 244441
Q ss_pred ccccccCCCCCC-CCCCCHHHHH--HHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 019226 248 VCVCAHQGDDVK-QKKPDPSIYV--TAAKRLGISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 248 ~~~~~~~~~~~~-~~KP~~~~~~--~~~~~lgv~~~~~i~vGDs~~Di~~a~~a 298 (344)
..++.-+. ..|-. ..+. ...+++ -...+++..||+..|+.|+...
T Consensus 151 ----gF~~~lIH~~NKn~-~~l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 151 ----GFKGPLIHTFNKNE-SALEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp ----EE-SS---TT-HHH-HHHTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred ----ecCCCceEEeeCCc-ccccCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence 00011111 11111 1111 011122 1357899999999999998766
No 205
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.39 E-value=0.13 Score=42.00 Aligned_cols=48 Identities=19% Similarity=0.106 Sum_probs=37.1
Q ss_pred HHHHHHHHHHcC-CCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchh
Q 019226 265 PSIYVTAAKRLG-ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 265 ~~~~~~~~~~lg-v~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
.+.+++....-. ..+++++||||.. .|+.+|...|-.+||+..+....
T Consensus 124 ~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~ 173 (190)
T KOG2961|consen 124 AEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAE 173 (190)
T ss_pred HHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccccc
Confidence 455555443223 4689999999999 59999999999999998877643
No 206
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=94.64 E-value=0.079 Score=49.76 Aligned_cols=96 Identities=21% Similarity=0.212 Sum_probs=61.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhh------------HHHHHHHhhccchhcccceeecccchhhhhccCCcCCc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS------------VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~------------~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
.+++.+..=+..|.+.||.+++.||..... ++.+.+.+ ++ .+.....
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl-~v----Pi~~~~A---------------- 162 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL-GV----PIQLLAA---------------- 162 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc-CC----ceEEeee----------------
Confidence 466777788888999999999999864321 12222221 11 0111111
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHcC----CCCCcEEEEecC---------------HhhHHHHHHcCCeEE
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLG----ISEKDCLVVEDS---------------VIGLQAATRAGMACV 303 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg----v~~~~~i~vGDs---------------~~Di~~a~~aG~~~v 303 (344)
......+||..-|++...+.++ +....+++|||- ..|+..|.++|+...
T Consensus 163 --------~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 163 --------IIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred --------ccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 1223468999999999997764 334556677763 247889999998764
No 207
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=94.14 E-value=0.2 Score=48.90 Aligned_cols=88 Identities=14% Similarity=0.230 Sum_probs=67.4
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
+.||++|-+.+||+.|++.+.+|+.++-....+..+. |+++| +.
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA-GVDdf------iA----------------------------- 491 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA-GVDDF------IA----------------------------- 491 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh-Cchhh------hh-----------------------------
Confidence 6789999999999999999999999998777777775 55554 32
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
.++| +-...+.++..-.-+=+.|.||+-||..+..+|.....+.
T Consensus 492 eatP--EdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 492 EATP--EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred cCCh--HHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 1344 3334455555555677789999999999999998886653
No 208
>PLN03017 trehalose-phosphatase
Probab=94.05 E-value=0.089 Score=49.79 Aligned_cols=70 Identities=13% Similarity=-0.004 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHcCCCC---CcEEEEecCHhhHHHHHHcC----CeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 263 PDPSIYVTAAKRLGISE---KDCLVVEDSVIGLQAATRAG----MACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~---~~~i~vGDs~~Di~~a~~aG----~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
.|....+.+++.++... .-.+|+||...|-.|.+.+. --+|.|..... ...+.+.+++ +.++.+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k----~T~A~y~L~d-----p~eV~~ 353 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK----DTDASYSLQD-----PSEVMD 353 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC----CCcceEeCCC-----HHHHHH
Confidence 35677788888877642 35799999998877776552 12345532111 1234555555 455556
Q ss_pred HHHHhh
Q 019226 336 LLQNVV 341 (344)
Q Consensus 336 ll~~~~ 341 (344)
+|+.+.
T Consensus 354 fL~~L~ 359 (366)
T PLN03017 354 FLARLV 359 (366)
T ss_pred HHHHHH
Confidence 665554
No 209
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=93.71 E-value=0.33 Score=52.33 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=30.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
++-+||.+.++.|+++|+|++++|+...+-+-.+.-.
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s 687 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS 687 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh
Confidence 6788999999999999999999999776655555444
No 210
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=93.68 E-value=0.26 Score=45.20 Aligned_cols=90 Identities=19% Similarity=0.193 Sum_probs=53.3
Q ss_pred ccCccHHHHHHHHHHc----CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 179 EPRPGVLRLMDEAKAA----GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~----g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
++.||+.+.++.|.++ .++.+++||+....-....+.+ ... .++-++
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l---S~~--Lgv~Vs------------------------ 101 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL---SAL--LGVEVS------------------------ 101 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH---HHh--hCCccC------------------------
Confidence 5667777888888777 7899999998765433333333 111 222222
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.+.+.... ..|+... ...-++++++|+... -+.|+..|++-|.
T Consensus 102 ~dqviqSH---sP~r~l~---~~~~k~vLv~G~~~v-r~vAegyGFk~Vv 144 (389)
T KOG1618|consen 102 ADQVIQSH---SPFRLLV---EYHYKRVLVVGQGSV-REVAEGYGFKNVV 144 (389)
T ss_pred HHHHHhhc---ChHHHHh---hhhhceEEEecCCcH-HHHhhccCcccee
Confidence 22222111 2244444 233588999997654 5668888998764
No 211
>PRK10444 UMP phosphatase; Provisional
Probab=93.63 E-value=0.48 Score=42.61 Aligned_cols=38 Identities=8% Similarity=0.092 Sum_probs=33.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++||+.++++.|+++|++++++||+.........+++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 68999999999999999999999999887666666665
No 212
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=93.53 E-value=1.3 Score=43.63 Aligned_cols=33 Identities=9% Similarity=0.020 Sum_probs=26.5
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~ 220 (344)
.++..++.| +++|+|...+-+++..++...+.+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 556667788 999999999999999998843433
No 213
>PLN02580 trehalose-phosphatase
Probab=93.50 E-value=0.13 Score=49.03 Aligned_cols=36 Identities=8% Similarity=-0.003 Sum_probs=30.2
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHH
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE 214 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~ 214 (344)
..+.+++.+.|++|.+. .+++|+|+.....++..+.
T Consensus 140 A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~ 175 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVG 175 (384)
T ss_pred ccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhC
Confidence 46778899999999888 6899999999887777764
No 214
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=92.19 E-value=1.5 Score=39.76 Aligned_cols=46 Identities=11% Similarity=-0.018 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC---CeEEEEeCCC
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG---MACVITYTSS 309 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG---~~~v~v~~~~ 309 (344)
+...+..+.+++....+-+++.||...|=.+..... -.+|.+..+.
T Consensus 183 KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~ 231 (266)
T COG1877 183 KGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGS 231 (266)
T ss_pred hHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCc
Confidence 567777788887776667899999998766666654 5556555553
No 215
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=91.24 E-value=0.39 Score=45.50 Aligned_cols=123 Identities=14% Similarity=0.110 Sum_probs=81.8
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecc--cchh-------hhh--ccCCcCCccc
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAD--CQSY-------VLM--TNGTLMPNRV 248 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~--~~~~-------~~~--~~~~~~~~~~ 248 (344)
..+-...++..+++.|.++.+.||++-......+.++.+.++-.-|+.++.. +|.| -++ ..|.+
T Consensus 199 ~d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l----- 273 (424)
T KOG2469|consen 199 YDGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLL----- 273 (424)
T ss_pred ecCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccc-----
Confidence 3445566999999999999999999999999999988663322223443331 1111 011 12222
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHH-HHcCCeEEEEeC
Q 019226 249 CVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAA-TRAGMACVITYT 307 (344)
Q Consensus 249 ~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a-~~aG~~~v~v~~ 307 (344)
..+.+++.--..+++++...+.++..+++.-.+++++||+.. |+... +.-||.++.|..
T Consensus 274 ~~g~~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 274 KNGDNTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred cccccCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 222222333345677888889999999999999999999996 77655 456999887753
No 216
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=90.90 E-value=0.31 Score=39.27 Aligned_cols=38 Identities=21% Similarity=0.091 Sum_probs=29.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCC--ChhhHHHHHHHh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAA--TKSSVILCLENL 216 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~--~~~~~~~~l~~l 216 (344)
+.+.|++.+.+++|-+. |.|.|+|.. -....+...+.+
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl 106 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWL 106 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHH
Confidence 57889999999999988 999999987 444455555555
No 217
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.18 E-value=0.49 Score=42.05 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=65.6
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhc-cCCcCCccccccccCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAHQG 255 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 255 (344)
.+.+.+|+.++++.|+++++++.+.|.+-...++.+..+..++..+ -.+++ +|.+.. .|.+- ++.
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn---~k~vS---N~~~F~edg~l~--------gF~ 201 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPN---VKFVS---NYMDFDEDGNLC--------GFS 201 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCcc---HHhhh---hhhhhcccchhh--------hhh
Confidence 4567788999999999999999999999999999998887554442 22333 333333 22210 000
Q ss_pred CCCC--CCCCCHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHc
Q 019226 256 DDVK--QKKPDPSIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 256 ~~~~--~~KP~~~~~~~~~~~lg--v~~~~~i~vGDs~~Di~~a~~a 298 (344)
.... ..|. -...+...+.+. -....+++.||+..|+.||..+
T Consensus 202 ~~Lihtfnkn-~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 202 QPLIHTFNKN-SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHHHHHHccc-hHHHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 0000 0111 122223233332 2457889999999999998764
No 218
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=90.15 E-value=2.3 Score=37.84 Aligned_cols=38 Identities=26% Similarity=0.365 Sum_probs=31.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++|++.+.|+.++++|+++.++||+.........+.+
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 57889999999999999999999998865555555554
No 219
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=89.07 E-value=3.7 Score=37.60 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=33.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.||+.++++.|++.|.++.++||+.....+..++..
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHH
Confidence 78999999999999999999999999887666666543
No 220
>PLN02580 trehalose-phosphatase
Probab=88.89 E-value=1.5 Score=41.92 Aligned_cols=71 Identities=15% Similarity=0.143 Sum_probs=46.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCc---EEEEecCHhhHHHHHH-----cCCeEEEEeCCCchhhhccccccccCCccccCHHH
Q 019226 261 KKPDPSIYVTAAKRLGISEKD---CLVVEDSVIGLQAATR-----AGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 332 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~---~i~vGDs~~Di~~a~~-----aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~ 332 (344)
+-.|....+.+++.+|+...+ .++|||+.+|..|.+. .|+. |.+..+.. ...+.+.+++ ..+
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~~~----~t~A~y~L~d-----p~e 368 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSVPK----ESNAFYSLRD-----PSE 368 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecCCC----CccceEEcCC-----HHH
Confidence 446789999999999997653 3899999999999986 3554 34432211 1123444544 456
Q ss_pred HHHHHHHhh
Q 019226 333 LELLLQNVV 341 (344)
Q Consensus 333 l~~ll~~~~ 341 (344)
+.++|+.+.
T Consensus 369 V~~~L~~L~ 377 (384)
T PLN02580 369 VMEFLKSLV 377 (384)
T ss_pred HHHHHHHHH
Confidence 666666554
No 221
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=88.72 E-value=1.3 Score=44.89 Aligned_cols=96 Identities=11% Similarity=0.079 Sum_probs=53.5
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
-..++..-|..||.++....++.+..-.++..-.+.- .++-......+++ .
T Consensus 712 sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~E-f~el~~~~~aVv~----------------------------C 762 (1051)
T KOG0210|consen 712 SRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDE-FIELVCELPAVVC----------------------------C 762 (1051)
T ss_pred CchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHH-HHHHHHhcCcEEE----------------------------E
Confidence 3456777788888887766666665554444333332 1111111222322 1
Q ss_pred CCCC--CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 260 QKKP--DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 260 ~~KP--~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
++-| +..+-+.+-++-| .++..|||+.||+.|.+.|..+ |++...
T Consensus 763 RctPtQKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~G-iGI~gk 809 (1051)
T KOG0210|consen 763 RCTPTQKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVG-IGIVGK 809 (1051)
T ss_pred ecChhHHHHHHHHHHHhhC---ceEEEEcCCCccchheeecccc-eeeecc
Confidence 2333 2333333333333 7888999999999999888766 344333
No 222
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=88.39 E-value=2.3 Score=44.22 Aligned_cols=98 Identities=18% Similarity=0.236 Sum_probs=65.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc-eeecccchhhhhccCCcCCccccccccCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD-CFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+..||+.+.++.++..|+.|--||+.+-..++.+..+. |+-.-. -| ..+. |.+
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eC-GILt~~-~d~~~lE------------------------G~e 700 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIAREC-GILTPG-GDFLALE------------------------GKE 700 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHc-ccccCC-Cccceec------------------------chh
Confidence 57899999999999999999999999988888877775 543211 12 1222 221
Q ss_pred C------------------CCCCC-CHHHHHHHHHHcCCCCCcEEEE-ecCHhhHHHHHHcCCeEEEEe
Q 019226 258 V------------------KQKKP-DPSIYVTAAKRLGISEKDCLVV-EDSVIGLQAATRAGMACVITY 306 (344)
Q Consensus 258 ~------------------~~~KP-~~~~~~~~~~~lgv~~~~~i~v-GDs~~Di~~a~~aG~~~v~v~ 306 (344)
. .+.-| |...+-+.++ ...+++.| ||+-||-.+.+.|.....|=-
T Consensus 701 Fr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~----~~g~VVAVTGDGTNDaPALkeADVGlAMGI 765 (1034)
T KOG0204|consen 701 FRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLI----KQGEVVAVTGDGTNDAPALKEADVGLAMGI 765 (1034)
T ss_pred hhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHH----hcCcEEEEecCCCCCchhhhhcccchhccc
Confidence 1 11222 2223333333 34566665 999999999999988876633
No 223
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.25 E-value=0.81 Score=41.35 Aligned_cols=37 Identities=27% Similarity=0.250 Sum_probs=30.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
.++||+.++|++|+++|++++++||+.........+.
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~ 57 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLER 57 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHH
Confidence 4899999999999999999999999876653333333
No 224
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=87.37 E-value=6.4 Score=34.85 Aligned_cols=97 Identities=12% Similarity=0.120 Sum_probs=60.8
Q ss_pred CccCccHHHHHH---HHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~---~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..++|+..++++ .|-+.|+.|.-.++.+.-.++++. .. | ...+...
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~-d~-G------caavMPl----------------------- 151 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLE-DA-G------CAAVMPL----------------------- 151 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHH-HT-T-------SEBEEB-----------------------
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHH-HC-C------CCEEEec-----------------------
Confidence 467788888875 577889999999998887555433 33 2 2333331
Q ss_pred CCCC--CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCC
Q 019226 255 GDDV--KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 255 ~~~~--~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~ 309 (344)
+..+ +.+--++..++.++++.+++ +.|+-+. .|...|...|+..|++|+..
T Consensus 152 gsPIGSg~Gi~n~~~l~~i~~~~~vP----vIvDAGiG~pSdaa~AMElG~daVLvNTAi 207 (247)
T PF05690_consen 152 GSPIGSGRGIQNPYNLRIIIERADVP----VIVDAGIGTPSDAAQAMELGADAVLVNTAI 207 (247)
T ss_dssp SSSTTT---SSTHHHHHHHHHHGSSS----BEEES---SHHHHHHHHHTT-SEEEESHHH
T ss_pred ccccccCcCCCCHHHHHHHHHhcCCc----EEEeCCCCCHHHHHHHHHcCCceeehhhHH
Confidence 3222 33556789999999999875 5665553 69999999999999998654
No 225
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=86.92 E-value=1.1 Score=40.20 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=29.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCCh---hhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATK---SSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---~~~~~~l~~l 216 (344)
.++|++.++|++|+++|++++++||+.. ......++.+
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 4678999999999999999999999653 3344444443
No 226
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=86.04 E-value=7.5 Score=39.35 Aligned_cols=137 Identities=15% Similarity=0.196 Sum_probs=68.3
Q ss_pred ccHHHHHHHHHHcCCeEEEEeCCChhh---HHHHHHHhhccchh--cccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 182 PGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERF--EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 182 pgv~~~l~~Lk~~g~~v~ivTn~~~~~---~~~~l~~l~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.||..|...++++||++..+|...--. .+..|..+.. +.. ..--++++ |-+. |-+- --
T Consensus 561 ~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~Q-dG~~LPdGPViLS--------------Pd~l-f~Al-~R 623 (738)
T KOG2116|consen 561 TGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQ-DGKKLPDGPVILS--------------PDSL-FAAL-HR 623 (738)
T ss_pred hhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhh-cCccCCCCCEEeC--------------CCcc-hHHH-HH
Confidence 378888889999999999999764332 3333433311 111 11111111 0000 0000 01
Q ss_pred CCCCCCCCH---HHHHHHHHHcCCCCCcEE--EEecCHhhHHHHHHcCCeE--EE-EeCCCchhhhccccccccCCcccc
Q 019226 257 DVKQKKPDP---SIYVTAAKRLGISEKDCL--VVEDSVIGLQAATRAGMAC--VI-TYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 257 ~~~~~KP~~---~~~~~~~~~lgv~~~~~i--~vGDs~~Di~~a~~aG~~~--v~-v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
++-..||+. ..+..+.+.+. +-.+-. -||+..+|+..=++.|+.- |. |+..+....++.. -...
T Consensus 624 EVI~RkPe~FKIAcL~DIk~LF~-p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~-------~~~~ 695 (738)
T KOG2116|consen 624 EVIERKPEVFKIACLTDIKNLFP-PSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLK-------TLKS 695 (738)
T ss_pred HHHHcCchhhhHHHHHHHHHhcC-CCCCceeeecCCCcccceeeeeecCCccceEEECCCceehHHHHh-------hhhh
Confidence 233355532 22222222233 223333 3899999999999999863 33 3333332222111 0223
Q ss_pred CHHHHHHHHHHhhhc
Q 019226 329 RLKDLELLLQNVVAA 343 (344)
Q Consensus 329 ~~~~l~~ll~~~~~~ 343 (344)
+...|.++++.||++
T Consensus 696 SY~~l~elVd~mFPp 710 (738)
T KOG2116|consen 696 SYVRLNELVDHMFPP 710 (738)
T ss_pred hhhhHHHHHHHhCCC
Confidence 556777888888876
No 227
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=85.70 E-value=9.5 Score=34.32 Aligned_cols=77 Identities=13% Similarity=0.046 Sum_probs=48.1
Q ss_pred CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHH
Q 019226 195 GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKR 274 (344)
Q Consensus 195 g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 274 (344)
-+++++||..+...-+++++-|-..+-. +|..+.. | +-||..+ ++.
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFL-----------------------g-----G~~K~~v----L~~ 231 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFL-----------------------G-----GLPKGPV----LKA 231 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHh-----------------------C-----CCchhHH----HHh
Confidence 3789999988776667777665211111 1222110 1 3333333 344
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 275 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 275 lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
++- =|||+|...-++.|. .+..++.|..+..
T Consensus 232 ~~p----hIFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 232 FRP----HIFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred hCC----CEeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 432 289999999999987 8889999887754
No 228
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=85.59 E-value=11 Score=33.75 Aligned_cols=98 Identities=12% Similarity=0.065 Sum_probs=69.9
Q ss_pred CccCccHHHHHH---HHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~---~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..++|+..++++ .|-+.|+.|.-.++.+.-.++++. .. | ...+...
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLe-d~-G------c~aVMPl----------------------- 165 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLE-DI-G------CATVMPL----------------------- 165 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHH-Hc-C------CeEEeec-----------------------
Confidence 467888888876 577889999999999987555433 32 2 2333221
Q ss_pred CCCC--CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCCc
Q 019226 255 GDDV--KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 255 ~~~~--~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+... +.+-.++..++.+++...++ +.+|-+. .|+..|...|+..|+++++..
T Consensus 166 gsPIGSg~Gl~n~~~l~~i~e~~~vp----VivdAGIgt~sDa~~AmElGaDgVL~nSaIa 222 (267)
T CHL00162 166 GSPIGSGQGLQNLLNLQIIIENAKIP----VIIDAGIGTPSEASQAMELGASGVLLNTAVA 222 (267)
T ss_pred cCcccCCCCCCCHHHHHHHHHcCCCc----EEEeCCcCCHHHHHHHHHcCCCEEeecceee
Confidence 3322 34566889999999887654 6666554 699999999999999988765
No 229
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=85.42 E-value=1.9 Score=38.58 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=33.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.+...+.|++|+++|++++++|+.....+...++.+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~ 53 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKEL 53 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc
Confidence 46677899999999999999999999988888777775
No 230
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=84.36 E-value=2.3 Score=38.37 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=34.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
.+.+...+.|++|+++|++++++|+.....+...++.+ ++
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~ 59 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKEL-HM 59 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHh-CC
Confidence 45677889999999999999999999998888888876 44
No 231
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=83.57 E-value=1 Score=40.01 Aligned_cols=38 Identities=13% Similarity=-0.032 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHcCCC---CCcEEEEecCHhhHHHHHHcCCe
Q 019226 264 DPSIYVTAAKRLGIS---EKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~---~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
|....+.++++++.. ++-++++||...|-.|.+.+.-.
T Consensus 166 KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 166 KGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred hHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 556777777777765 77899999999999888886553
No 232
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=83.40 E-value=2.2 Score=45.64 Aligned_cols=38 Identities=11% Similarity=0.106 Sum_probs=31.6
Q ss_pred CccCccHHHHHHHHHHc-CCeEEEEeCCChhhHHHHHHH
Q 019226 178 VEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~-g~~v~ivTn~~~~~~~~~l~~ 215 (344)
..+.|++.++|+.|.+. +..|+|+|+.+...++..+..
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~ 659 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGE 659 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCC
Confidence 46778899999999876 678999999999887777754
No 233
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=82.91 E-value=18 Score=33.77 Aligned_cols=101 Identities=14% Similarity=0.123 Sum_probs=67.3
Q ss_pred CCccCccHHHHHHHHHHc---CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccccc
Q 019226 177 TVEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~---g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
....+|+..++++..+.. |+.+.++.+.+....+.+. .+ +-.-...+-.-|
T Consensus 176 ~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~-~~-g~~avmPl~~pI------------------------ 229 (326)
T PRK11840 176 AKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLE-DA-GAVAVMPLGAPI------------------------ 229 (326)
T ss_pred CCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hc-CCEEEeeccccc------------------------
Confidence 346789999999888877 9999777777776555443 32 211000001111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCCc
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~~ 310 (344)
|. +.+-.+|+.++.+.+...+ -+.+|-+. .|+..|...|...|+++++..
T Consensus 230 -Gs--g~gv~~p~~i~~~~e~~~v----pVivdAGIg~~sda~~AmelGadgVL~nSaIa 282 (326)
T PRK11840 230 -GS--GLGIQNPYTIRLIVEGATV----PVLVDAGVGTASDAAVAMELGCDGVLMNTAIA 282 (326)
T ss_pred -cC--CCCCCCHHHHHHHHHcCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEcceec
Confidence 22 2233489999999988543 26677664 599999999999999998765
No 234
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=81.25 E-value=3.9 Score=42.59 Aligned_cols=39 Identities=8% Similarity=0.185 Sum_probs=34.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++.|+....++.|.+.+.+++.+|+.+...+.++.+.+
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v 712 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEV 712 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehhee
Confidence 468899999999999999999999999988787777776
No 235
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=81.06 E-value=3.3 Score=36.23 Aligned_cols=53 Identities=21% Similarity=0.408 Sum_probs=41.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYV 236 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~ 236 (344)
..+.|...+.|++|+++|++++++|+.....+...+..+ ++. +.+++.+|.++
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~-~~~-----~~~I~~nGa~i 66 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKEL-GID-----DYFICSNGALI 66 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHT-THC-----SEEEEGGGTEE
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccc-cch-----hhhccccccee
Confidence 357789999999999999999999999998888888875 433 34555444444
No 236
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=80.43 E-value=29 Score=31.05 Aligned_cols=102 Identities=15% Similarity=0.130 Sum_probs=65.5
Q ss_pred CCccCccHHHHHHHHHHc---CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccccc
Q 019226 177 TVEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~---g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
.-.++|+..++++..+.- |+.+.-+.+.+....+.+.+. + .+.+... | .-+
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~--G------~~~vmPl---------g------~pI--- 155 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA--G------CAAVMPL---------G------SPI--- 155 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc--C------CCEeCCC---------C------cCC---
Confidence 346789999999888777 999995666666655544332 2 2222110 0 000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC---HhhHHHHHHcCCeEEEEeCCCch
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS---VIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs---~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
|.. .+.-+++.++.+.+..++ .+++|-+ +.|+..+...|...|++++....
T Consensus 156 -Gsg--~Gi~~~~~I~~I~e~~~v----pVI~egGI~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 156 -GSG--QGLLNPYNLRIIIERADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred -CCC--CCCCCHHHHHHHHHhCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 222 234458888888776543 2555554 46999999999999999887653
No 237
>PRK10976 putative hydrolase; Provisional
Probab=80.39 E-value=2.9 Score=37.61 Aligned_cols=38 Identities=16% Similarity=0.098 Sum_probs=33.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.+...+.|++|+++|++++++|+.....+...++.+
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l 56 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNL 56 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc
Confidence 46667889999999999999999999998888877775
No 238
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=79.79 E-value=3.4 Score=43.65 Aligned_cols=38 Identities=13% Similarity=0.083 Sum_probs=27.7
Q ss_pred CccCccHHHHHHHHHHc-CCeEEEEeCCChhhHHHHHHH
Q 019226 178 VEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~-g~~v~ivTn~~~~~~~~~l~~ 215 (344)
..+.|++.++|+.|.+. +..|+|+|+.+...++..+..
T Consensus 531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 531 LGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 35667788888888765 677888888877777766643
No 239
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=79.43 E-value=4.2 Score=35.88 Aligned_cols=53 Identities=19% Similarity=0.270 Sum_probs=40.4
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM 238 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~ 238 (344)
..++..+.|++|+++|++++++|+.....+...++.+ ++. +.+++.+|++|..
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~l-g~~-----~~~I~~NGa~I~~ 68 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREEL-GVE-----PPFIVENGGAIFI 68 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCC-----CcEEEcCCcEEEe
Confidence 4567899999999999999999999988888888776 432 2356656666544
No 240
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=78.94 E-value=3.2 Score=37.69 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=34.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
.+.+++.++|+.|+++|++++++||.....+...++.+ ++
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l-~l 60 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL-GL 60 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CC
Confidence 45577899999999999999999999998888888886 44
No 241
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=78.55 E-value=2.9 Score=38.65 Aligned_cols=53 Identities=21% Similarity=0.204 Sum_probs=40.1
Q ss_pred CCCCCCHHHHHHHHHH-------cC-C-CCCcEEEEecCH-hhHHHHH---------------HcCCeEEEEeCCCch
Q 019226 259 KQKKPDPSIYVTAAKR-------LG-I-SEKDCLVVEDSV-IGLQAAT---------------RAGMACVITYTSSTA 311 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~-------lg-v-~~~~~i~vGDs~-~Di~~a~---------------~aG~~~v~v~~~~~~ 311 (344)
..+||.+-.|+.+... .+ . ++.++.+|||++ .|+.+|. .-||.+|+|.+|...
T Consensus 268 t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~ 345 (389)
T KOG1618|consen 268 TLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN 345 (389)
T ss_pred ccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence 5689988777665432 22 2 467888999999 5999996 778999999877665
No 242
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=78.52 E-value=3.9 Score=36.77 Aligned_cols=41 Identities=22% Similarity=0.382 Sum_probs=36.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~ 220 (344)
.+.+.+.+.|++++++|++++++|+.....+...++.+ ++.
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l-~~~ 60 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEEL-GLD 60 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc-CCC
Confidence 47788999999999999999999999999999999887 443
No 243
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=78.10 E-value=3.8 Score=37.04 Aligned_cols=38 Identities=8% Similarity=0.038 Sum_probs=33.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.+...+.|++|+++|++++++|+.....+...++.+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l 56 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGAL 56 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc
Confidence 46677889999999999999999999998888888776
No 244
>PRK00208 thiG thiazole synthase; Reviewed
Probab=76.95 E-value=43 Score=29.99 Aligned_cols=101 Identities=13% Similarity=0.113 Sum_probs=63.6
Q ss_pred CccCccHHHHHHHHHHc---CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~---g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
...+|+..++++..+.- |+.+.-+.+.+....+.+. .+ + .+.+... | .-+
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~-~~-G------~~~vmPl---------g------~pI---- 155 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLE-EA-G------CAAVMPL---------G------API---- 155 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-Hc-C------CCEeCCC---------C------cCC----
Confidence 45789999999887777 9999955555655454433 32 2 1222110 0 000
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCCch
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
|.. .+.-+++.++.+.+..++ .+.+|-+. .|+..+...|...|++++....
T Consensus 156 Gsg--~gi~~~~~i~~i~e~~~v----pVIveaGI~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 156 GSG--LGLLNPYNLRIIIEQADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred CCC--CCCCCHHHHHHHHHhcCC----eEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 222 233357888888776544 35665554 5999999999999999887653
No 245
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=76.48 E-value=4.4 Score=35.21 Aligned_cols=38 Identities=11% Similarity=0.038 Sum_probs=33.6
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.|...+.|++|+++|++++++|+.....++...+.+
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l 55 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLI 55 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHh
Confidence 46778899999999999999999999998888877765
No 246
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=74.24 E-value=5.4 Score=34.75 Aligned_cols=38 Identities=21% Similarity=0.327 Sum_probs=32.9
Q ss_pred CccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 181 ~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
.+...+.|+.|+++|++++++||.....++..++.+ ++
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l-~~ 55 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKAL-GL 55 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CC
Confidence 333789999999999999999999999999999887 54
No 247
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=74.20 E-value=40 Score=29.90 Aligned_cols=98 Identities=12% Similarity=0.102 Sum_probs=68.3
Q ss_pred CccCccHHHHHH---HHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~---~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
-.+.|+..++++ .|-+.|+.|.-.++.+.-..+++.+. | ...+...
T Consensus 110 ~tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee~--G------caavMPl----------------------- 158 (262)
T COG2022 110 KTLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEEA--G------CAAVMPL----------------------- 158 (262)
T ss_pred cccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHhc--C------ceEeccc-----------------------
Confidence 467888888886 56788999999999888655544332 2 1222221
Q ss_pred CCC--CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCCc
Q 019226 255 GDD--VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 255 ~~~--~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+.. .+.+--.+..++.++++..++ +.|+-+. .|...|...|+..|++|+...
T Consensus 159 ~aPIGSg~G~~n~~~l~iiie~a~VP----viVDAGiG~pSdAa~aMElG~DaVL~NTAiA 215 (262)
T COG2022 159 GAPIGSGLGLQNPYNLEIIIEEADVP----VIVDAGIGTPSDAAQAMELGADAVLLNTAIA 215 (262)
T ss_pred cccccCCcCcCCHHHHHHHHHhCCCC----EEEeCCCCChhHHHHHHhcccceeehhhHhh
Confidence 111 223445689999999999876 5665543 699999999999999987654
No 248
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=72.79 E-value=6.2 Score=34.46 Aligned_cols=38 Identities=8% Similarity=0.033 Sum_probs=33.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.|...+.|++|+++|++++++|+.....+...++.+
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l 57 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLI 57 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh
Confidence 46677889999999999999999999998888777775
No 249
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=72.36 E-value=7.6 Score=34.78 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=31.2
Q ss_pred ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 182 pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
+...+.++.|+++|++++++|+.....+...++.+
T Consensus 19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~ 53 (256)
T TIGR01486 19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKEL 53 (256)
T ss_pred hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 45789999999999999999999998888888776
No 250
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=70.10 E-value=8.1 Score=35.58 Aligned_cols=38 Identities=24% Similarity=0.320 Sum_probs=32.1
Q ss_pred CCCccCccHHHHHHHHHHcC-CeEEEEeCCChhhHHHHH
Q 019226 176 GTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCL 213 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g-~~v~ivTn~~~~~~~~~l 213 (344)
+...++|...++++.+|+.| ++++++||+....+.+.+
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L 127 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEEL 127 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHh
Confidence 55789999999999999999 799999999985444444
No 251
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=70.07 E-value=17 Score=33.94 Aligned_cols=29 Identities=7% Similarity=0.014 Sum_probs=26.0
Q ss_pred ccCccHHHHHHHHHHc----CCeEEEEeCCChh
Q 019226 179 EPRPGVLRLMDEAKAA----GKKVAVCSAATKS 207 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~----g~~v~ivTn~~~~ 207 (344)
.+.||+.++++.|+.+ |+++.++||+...
T Consensus 16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~ 48 (321)
T TIGR01456 16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGF 48 (321)
T ss_pred cccHHHHHHHHHHhccccccCCCEEEEecCCCC
Confidence 5699999999999998 9999999998743
No 252
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=69.27 E-value=8.2 Score=33.53 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=32.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.+...+.|++|+++|++++++|+.....+...++.+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l 52 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLI 52 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh
Confidence 35567788999999999999999999998888877776
No 253
>PTZ00174 phosphomannomutase; Provisional
Probab=68.98 E-value=8.7 Score=34.29 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=29.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE 214 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~ 214 (344)
.+.|...+.|++++++|++++++|+.....+...+.
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 466778899999999999999999988775554443
No 254
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=68.95 E-value=8.3 Score=34.62 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=33.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.|...+.|++++++|++++++|+.....+...++.+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l 57 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL 57 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc
Confidence 46778899999999999999999999988888888776
No 255
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=68.14 E-value=14 Score=40.04 Aligned_cols=52 Identities=15% Similarity=0.000 Sum_probs=38.8
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEE-EecCHh-hHHHHHHcCCeEEEEeC
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLV-VEDSVI-GLQAATRAGMACVITYT 307 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~-vGDs~~-Di~~a~~aG~~~v~v~~ 307 (344)
+-++..-.+...++++..++|++.+++++ +||+.+ |+++...---.+|.+..
T Consensus 949 DVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 949 NVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred eeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 44555666789999999999999999955 999999 98877443334555543
No 256
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=66.07 E-value=9.6 Score=38.83 Aligned_cols=51 Identities=18% Similarity=0.172 Sum_probs=42.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeec
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA 230 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~ 230 (344)
+++.|++.++|+.+.+. |.+.|+|-+.+..+..+.+-+..-..++ -+.+++
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF-~dRIis 250 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYF-GDRIIS 250 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccc-cceEEE
Confidence 68999999999999987 9999999999999999988874444443 267777
No 257
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=66.03 E-value=1e+02 Score=27.84 Aligned_cols=126 Identities=13% Similarity=0.108 Sum_probs=73.0
Q ss_pred HHHHHHHHHcCCeEEEEeCCC--hhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC-CCCCC
Q 019226 185 LRLMDEAKAAGKKVAVCSAAT--KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD-DVKQK 261 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~--~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 261 (344)
.++|+.+.+.|.+|.+-++.. ...+...++.+ .....-+.+++ .|-.... .....
T Consensus 122 ~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i---~~~Gn~~i~l~-------------------~rG~s~y~~~~~~ 179 (260)
T TIGR01361 122 FELLKEVGKQGKPVLLKRGMGNTIEEWLYAAEYI---LSSGNGNVILC-------------------ERGIRTFEKATRN 179 (260)
T ss_pred HHHHHHHhcCCCcEEEeCCCCCCHHHHHHHHHHH---HHcCCCcEEEE-------------------ECCCCCCCCCCcC
Confidence 468999999999998888744 33344444443 11111122222 2101011 22334
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecC--------HhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHH
Q 019226 262 KPDPSIYVTAAKRLGISEKDCLVVEDS--------VIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 333 (344)
Q Consensus 262 KP~~~~~~~~~~~lgv~~~~~i~vGDs--------~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l 333 (344)
..+-..+..+.+.++++ +++--|. ..-..+|.++|...+++....+....+ .++-.-+++++|
T Consensus 180 ~~dl~~i~~lk~~~~~p---V~~ds~Hs~G~r~~~~~~~~aAva~Ga~gl~iE~H~t~d~a~------~D~~~sl~p~~l 250 (260)
T TIGR01361 180 TLDLSAVPVLKKETHLP---IIVDPSHAAGRRDLVIPLAKAAIAAGADGLMIEVHPDPEKAL------SDSKQQLTPEEF 250 (260)
T ss_pred CcCHHHHHHHHHhhCCC---EEEcCCCCCCccchHHHHHHHHHHcCCCEEEEEeCCCccccC------CcchhcCCHHHH
Confidence 55667777777766653 2221333 234557888999988887666644333 345566789999
Q ss_pred HHHHHHhh
Q 019226 334 ELLLQNVV 341 (344)
Q Consensus 334 ~~ll~~~~ 341 (344)
.++++++.
T Consensus 251 ~~lv~~i~ 258 (260)
T TIGR01361 251 KRLVKELR 258 (260)
T ss_pred HHHHHHHh
Confidence 99999865
No 258
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=65.91 E-value=10 Score=34.27 Aligned_cols=39 Identities=18% Similarity=0.291 Sum_probs=33.6
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
+.+...+.|++|+++|++++++|+.....+...++.+ ++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l-~~ 63 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL-GL 63 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh-CC
Confidence 4456788999999999999999999999888888886 44
No 259
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=64.94 E-value=38 Score=31.59 Aligned_cols=34 Identities=21% Similarity=0.099 Sum_probs=28.3
Q ss_pred CCccCccHHHHHHHHHHcC-CeEEEEeCCChhhHH
Q 019226 177 TVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVI 210 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g-~~v~ivTn~~~~~~~ 210 (344)
...++|||-.+.+.|.+.| .++.-+||+.-....
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~ 228 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFP 228 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHH
Confidence 3579999999999999987 899999998765433
No 260
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=64.58 E-value=4.7 Score=34.73 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=21.0
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHh
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSH 95 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~ 95 (344)
--.++||+||||........+.+.+.+..
T Consensus 11 ~~l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 11 ETLCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred ceEEEEecCCccccccccCCHHHHHHHHH
Confidence 34899999999998876655555555554
No 261
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=64.35 E-value=20 Score=33.57 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=27.6
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
+...++|.+.++++.++++|+.+.+.||+...
T Consensus 139 GEPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 139 GEPTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred ccccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 34557889999999999999999999999753
No 262
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=62.35 E-value=14 Score=34.09 Aligned_cols=54 Identities=11% Similarity=0.129 Sum_probs=40.4
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhc
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT 239 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~ 239 (344)
.++.+.+.|++|+++|++++++|+.....+..+.+.+ ++.. .+|+.++..|...
T Consensus 19 ~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~L-gl~~-----p~I~eNGA~I~~p 72 (302)
T PRK12702 19 SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQL-RLEH-----PFICEDGSAIYVP 72 (302)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh-CCCC-----eEEEeCCcEEEEc
Confidence 4556889999999999999999999999888888886 5432 3555444444443
No 263
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=61.18 E-value=1.3e+02 Score=27.33 Aligned_cols=48 Identities=13% Similarity=0.196 Sum_probs=35.1
Q ss_pred HhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhhh
Q 019226 289 VIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 289 ~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
.....+|.++|...+++....+....+ .++-.-+++++|+++++++..
T Consensus 214 ~~~~~aAva~Ga~Gl~iE~H~~pd~a~------~D~~~sl~p~~l~~l~~~i~~ 261 (266)
T PRK13398 214 IPMAKAAIAAGADGLMIEVHPEPEKAL------SDARQTLNFEEMKELVDELKP 261 (266)
T ss_pred HHHHHHHHHcCCCEEEEeccCCccccC------CchhhcCCHHHHHHHHHHHHH
Confidence 346788899999988887666654433 345566789999999988653
No 264
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=61.01 E-value=5.5 Score=38.37 Aligned_cols=18 Identities=28% Similarity=0.495 Sum_probs=15.4
Q ss_pred CCccEEEEecCccccccc
Q 019226 65 QSLQALIFDCDGVIIESE 82 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~ 82 (344)
...+.|++|+||||..++
T Consensus 373 ~n~kiVVsDiDGTITkSD 390 (580)
T COG5083 373 NNKKIVVSDIDGTITKSD 390 (580)
T ss_pred CCCcEEEEecCCcEEehh
Confidence 357899999999999875
No 265
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=60.89 E-value=9.1 Score=34.11 Aligned_cols=46 Identities=28% Similarity=0.338 Sum_probs=37.2
Q ss_pred CCCCH----HHHHHHHHHcCCCC--CcEEEEecCH-hhHHHHHHcCCeEEEEeC
Q 019226 261 KKPDP----SIYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYT 307 (344)
Q Consensus 261 ~KP~~----~~~~~~~~~lgv~~--~~~i~vGDs~-~Di~~a~~aG~~~v~v~~ 307 (344)
-||.| +.|..-++.+|++| +++-||.|+. +--.+|...||.+ |++.
T Consensus 80 iKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEV-WldG 132 (279)
T cd00733 80 IKPSPDNIQELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEV-WLDG 132 (279)
T ss_pred ECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEE-EECC
Confidence 46665 67888999999985 6899999998 5888999999984 5653
No 266
>TIGR03586 PseI pseudaminic acid synthase.
Probab=60.83 E-value=53 Score=30.84 Aligned_cols=126 Identities=14% Similarity=0.170 Sum_probs=68.7
Q ss_pred HHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCC
Q 019226 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPD 264 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~ 264 (344)
.++|+.+.+.|.+|.+-|+... ..++.....-+.....-+.++ ++|.. ........-+
T Consensus 124 ~~LL~~va~~gkPvilstG~~t--~~Ei~~Av~~i~~~g~~~i~L-------------------lhC~s-~YP~~~~~~n 181 (327)
T TIGR03586 124 LPLIRYVAKTGKPIIMSTGIAT--LEEIQEAVEACREAGCKDLVL-------------------LKCTS-SYPAPLEDAN 181 (327)
T ss_pred HHHHHHHHhcCCcEEEECCCCC--HHHHHHHHHHHHHCCCCcEEE-------------------EecCC-CCCCCcccCC
Confidence 6899999999999999888743 444443331111111112222 22311 1222222234
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCHhhHHH---HHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhh
Q 019226 265 PSIYVTAAKRLGISEKDCLVVEDSVIGLQA---ATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 265 ~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~---a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
-..+..+.+.++++ +=+.|+..++.+ |.++|.. ++....+....+++++ +..-+++++|.++++++.
T Consensus 182 L~~i~~lk~~f~~p----VG~SDHt~G~~~~~aAva~GA~--iIEkH~tld~~l~G~D----~~~Sl~p~e~~~lv~~ir 251 (327)
T TIGR03586 182 LRTIPDLAERFNVP----VGLSDHTLGILAPVAAVALGAC--VIEKHFTLDRSDGGVD----SAFSLEPDEFKALVKEVR 251 (327)
T ss_pred HHHHHHHHHHhCCC----EEeeCCCCchHHHHHHHHcCCC--EEEeCCChhhcCCCCC----hhccCCHHHHHHHHHHHH
Confidence 45566666666542 324566544443 4445765 5555555555554444 445568899999988765
Q ss_pred h
Q 019226 342 A 342 (344)
Q Consensus 342 ~ 342 (344)
.
T Consensus 252 ~ 252 (327)
T TIGR03586 252 N 252 (327)
T ss_pred H
Confidence 3
No 267
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=60.18 E-value=19 Score=31.39 Aligned_cols=38 Identities=24% Similarity=0.254 Sum_probs=33.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
...||..+.+++|++.+.+|-.+||.....-+.+.+++
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 37899999999999999999999999888777776666
No 268
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=59.63 E-value=48 Score=26.51 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=31.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh-hhHHHHHHHh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK-SSVILCLENL 216 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~-~~~~~~l~~l 216 (344)
...|+++...|..|++.|+.++++|++.. +.+...|+.+
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh
Confidence 67999999999999999999999999864 3444445443
No 269
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=59.57 E-value=1.5e+02 Score=27.56 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=27.8
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
+.+-++|++.++++.++++|..+.++||+...
T Consensus 81 GEPLL~pdl~eiv~~~~~~g~~v~l~TNG~ll 112 (318)
T TIGR03470 81 GEPLLHPEIDEIVRGLVARKKFVYLCTNALLL 112 (318)
T ss_pred ccccccccHHHHHHHHHHcCCeEEEecCceeh
Confidence 44667899999999999999999999999763
No 270
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=59.20 E-value=9.9 Score=33.95 Aligned_cols=46 Identities=28% Similarity=0.328 Sum_probs=37.2
Q ss_pred CCCCH----HHHHHHHHHcCCCC--CcEEEEecCH-hhHHHHHHcCCeEEEEeC
Q 019226 261 KKPDP----SIYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYT 307 (344)
Q Consensus 261 ~KP~~----~~~~~~~~~lgv~~--~~~i~vGDs~-~Di~~a~~aG~~~v~v~~ 307 (344)
-||.| +.|..-++.+|++| +++-||.|+. +--.+|...||.+ |++.
T Consensus 84 lKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEV-WldG 136 (283)
T PRK09348 84 LKPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEV-WLDG 136 (283)
T ss_pred EcCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccceEE-EECC
Confidence 46665 67888999999985 6899999998 5888999999984 6654
No 271
>PHA02575 1 deoxynucleoside monophosphate kinase; Provisional
Probab=59.12 E-value=64 Score=28.56 Aligned_cols=63 Identities=16% Similarity=0.253 Sum_probs=44.6
Q ss_pred CCCcEEEEecCH--hhHHHHHHcCCeEEEEeCCCch------hhhc--cccccccCCccccCHHHHHHHHHHhhh
Q 019226 278 SEKDCLVVEDSV--IGLQAATRAGMACVITYTSSTA------EQDF--KDAIAIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 278 ~~~~~i~vGDs~--~Di~~a~~aG~~~v~v~~~~~~------~~~l--~~~~~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
++...++|-|-- |++++.++.|...|.+.++... +..+ ...+.++.| +-++++|.+.+.++++
T Consensus 154 ~~~~~vVVTDVRf~nEie~lre~Gg~iV~V~R~~~~vd~H~SE~gLd~~~~D~vI~N--dGtleeL~~qV~~ll~ 226 (227)
T PHA02575 154 SDYDYFIVTDVRQDHEMELVRAMGATVIHVVRDTGLVDTHSTEAGLPIQPGDIVITN--NGTLEELKSKILNLIK 226 (227)
T ss_pred ccCCCEEEeCCCChhHHHHHHHcCCEEEEEecCCCCccCCCCccCCCCCCCCEEEEc--CCCHHHHHHHHHHHhh
Confidence 345688999985 7999999999988888776532 1112 124556655 5577899988888764
No 272
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=58.94 E-value=1.1e+02 Score=28.02 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=65.2
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
.+.++|+..++.+|-+..+.-.+.+.++.+++.. . .. ....++.+ ..|.+ ......+
T Consensus 5 ~~~~lL~~A~~~~yAV~AfN~~n~e~~~avi~AA-e--~~-~sPvIiq~-------~~~~~------------~~~~~~~ 61 (285)
T PRK07709 5 SMKEMLNKALEGKYAVGQFNMNNLEWTQAILAAA-E--EE-KSPVILGV-------SEGAA------------RHMTGFK 61 (285)
T ss_pred cHHHHHHHHHHCCceEEEEEECCHHHHHHHHHHH-H--HH-CCCEEEEc-------Ccchh------------hhcCCHH
Confidence 4678999999999999988877888888888776 2 21 12444441 11110 0000011
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
.-..+.+.++++..++--=+++. |.+..++..|..+|+++||+.....
T Consensus 62 ~~~~~~~~~a~~~~~~VPV~lHLDHg~~~e~i~~ai~~GftSVM~DgS~l 111 (285)
T PRK07709 62 TVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHH 111 (285)
T ss_pred HHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCC
Confidence 12245556666665333345666 5556799999999999999986554
No 273
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=58.79 E-value=5.7 Score=32.45 Aligned_cols=15 Identities=27% Similarity=0.594 Sum_probs=13.3
Q ss_pred cEEEEecCccccccc
Q 019226 68 QALIFDCDGVIIESE 82 (344)
Q Consensus 68 k~viFD~DGTL~d~~ 82 (344)
+.+++|+||||+++.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 589999999999874
No 274
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=58.71 E-value=1.5e+02 Score=27.27 Aligned_cols=101 Identities=15% Similarity=0.091 Sum_probs=63.0
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
.+.++|+..++.||-++.+.-.+.+.++.+++.. . .. ....++.+ +......-
T Consensus 5 ~~k~lL~~A~~~~yAV~AfN~~n~e~~~avi~AA-e--e~-~sPvIl~~-----------------------~~~~~~~~ 57 (286)
T PRK08610 5 SMKEMLIDAKENGYAVGQYNLNNLEFTQAILEAS-Q--EE-NAPVILGV-----------------------SEGAARYM 57 (286)
T ss_pred cHHHHHHHHHHCCceEEEEEECCHHHHHHHHHHH-H--HH-CCCEEEEc-----------------------CccHHhhc
Confidence 3678999999999999888777777788777776 2 21 12444441 11110011
Q ss_pred C----CHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 263 P----DPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 263 P----~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+ -..+...++++..++--=+++. |.+..++..|..+|+++||+.....
T Consensus 58 ~~~~~~~~~~~~~A~~~~~~vPV~lHLDHg~~~e~i~~ai~~GftSVM~DgS~l 111 (286)
T PRK08610 58 SGFYTVVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHS 111 (286)
T ss_pred CcHHHHHHHHHHHHHHcCCCCCEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCC
Confidence 1 1344555566665322344555 4556788899999999999986553
No 275
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=58.49 E-value=1.4e+02 Score=26.87 Aligned_cols=130 Identities=12% Similarity=0.098 Sum_probs=70.7
Q ss_pred HHHHHHHHHcCCeEEEEeCC--ChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC-CC
Q 019226 185 LRLMDEAKAAGKKVAVCSAA--TKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK-QK 261 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~--~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 261 (344)
.++|+.+.+.|.+|.+-++. +.+......+.+ .....-+.+++ .. |.+ +.... ..
T Consensus 112 ~~LL~~va~tgkPVilk~G~~~t~~e~~~A~e~i---~~~Gn~~i~L~--------eR----------g~~-~Y~~~~~n 169 (250)
T PRK13397 112 FEFLKTLSHIDKPILFKRGLMATIEEYLGALSYL---QDTGKSNIILC--------ER----------GVR-GYDVETRN 169 (250)
T ss_pred HHHHHHHHccCCeEEEeCCCCCCHHHHHHHHHHH---HHcCCCeEEEE--------cc----------ccC-CCCCcccc
Confidence 68899999999888877762 233333334333 11111122222 00 111 22221 12
Q ss_pred CCCHHHHHHHHHHcCCC--CCcEEEEecCH---hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 262 KPDPSIYVTAAKRLGIS--EKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 262 KP~~~~~~~~~~~lgv~--~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
..+-..+..+.+.++++ .+-.--.|... .=..+|.++|...+++.........+ .+.-..+++++|++|
T Consensus 170 ~~dl~ai~~lk~~~~lPVivd~SHs~G~r~~v~~~a~AAvA~GAdGl~IE~H~~P~~A~------sD~~q~l~~~~l~~l 243 (250)
T PRK13397 170 MLDIMAVPIIQQKTDLPIIVDVSHSTGRRDLLLPAAKIAKAVGANGIMMEVHPDPDHAL------SDAAQQIDYKQLEQL 243 (250)
T ss_pred ccCHHHHHHHHHHhCCCeEECCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCccccc------CchhhhCCHHHHHHH
Confidence 45556666666667765 11111134321 23467778899988887666554333 333455688999999
Q ss_pred HHHhhh
Q 019226 337 LQNVVA 342 (344)
Q Consensus 337 l~~~~~ 342 (344)
++++.+
T Consensus 244 ~~~~~~ 249 (250)
T PRK13397 244 GQELWQ 249 (250)
T ss_pred HHHhcc
Confidence 998754
No 276
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=58.14 E-value=11 Score=33.86 Aligned_cols=46 Identities=30% Similarity=0.364 Sum_probs=37.1
Q ss_pred CCCCH----HHHHHHHHHcCCCC--CcEEEEecCH-hhHHHHHHcCCeEEEEeC
Q 019226 261 KKPDP----SIYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYT 307 (344)
Q Consensus 261 ~KP~~----~~~~~~~~~lgv~~--~~~i~vGDs~-~Di~~a~~aG~~~v~v~~ 307 (344)
-||.| +.|..-++.+|++| +++-||.|+. +--.+|...||. ||++.
T Consensus 81 lKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWE-VWldG 133 (293)
T TIGR00388 81 IKPSPDNIQELYLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWE-VWLDG 133 (293)
T ss_pred ECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccE-EEECC
Confidence 46665 67888899999985 6899999998 588899999998 46654
No 277
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=57.89 E-value=63 Score=32.52 Aligned_cols=34 Identities=29% Similarity=0.445 Sum_probs=26.1
Q ss_pred HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 270 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 270 ~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
.-+++.|++ ++|||... ...|+++|+..|.+.++
T Consensus 139 ~~l~~~G~~----~viG~~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 139 NDLRARGIG----AVVGAGLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHHHCCCC----EEECChHH-HHHHHHcCCceEEEecH
Confidence 334455653 78899976 67889999999999876
No 278
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=57.70 E-value=16 Score=30.72 Aligned_cols=40 Identities=20% Similarity=0.338 Sum_probs=26.5
Q ss_pred HHHHHHHHHc---CCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 266 SIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 266 ~~~~~~~~~l---gv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+-++.+++++ |++ ++||++.. ...|++.|+.++.+.++..
T Consensus 112 ~e~~~~i~~~~~~G~~----viVGg~~~-~~~A~~~gl~~v~i~sg~e 154 (176)
T PF06506_consen 112 EEIEAAIKQAKAEGVD----VIVGGGVV-CRLARKLGLPGVLIESGEE 154 (176)
T ss_dssp HHHHHHHHHHHHTT------EEEESHHH-HHHHHHTTSEEEESS--HH
T ss_pred HHHHHHHHHHHHcCCc----EEECCHHH-HHHHHHcCCcEEEEEecHH
Confidence 3444555544 543 78999875 7889999999999877544
No 279
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=56.84 E-value=6.1 Score=32.91 Aligned_cols=15 Identities=27% Similarity=0.594 Sum_probs=13.1
Q ss_pred cEEEEecCccccccc
Q 019226 68 QALIFDCDGVIIESE 82 (344)
Q Consensus 68 k~viFD~DGTL~d~~ 82 (344)
+++++|+|+||+.+.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 589999999999864
No 280
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=56.11 E-value=19 Score=32.27 Aligned_cols=126 Identities=17% Similarity=0.228 Sum_probs=58.9
Q ss_pred HHHHHHHHHHcCCeEEEEeCCCh-hhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATK-SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~-~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
-.++|+.+.+.|.++.+-|+... ..++..++.+ ..-..-+.++- +|.. +.......
T Consensus 102 n~~lL~~~A~tgkPvIlSTG~stl~EI~~Av~~~---~~~~~~~l~ll-------------------HC~s-~YP~~~e~ 158 (241)
T PF03102_consen 102 NLPLLEYIAKTGKPVILSTGMSTLEEIERAVEVL---REAGNEDLVLL-------------------HCVS-SYPTPPED 158 (241)
T ss_dssp -HHHHHHHHTT-S-EEEE-TT--HHHHHHHHHHH---HHHCT--EEEE-------------------EE-S-SSS--GGG
T ss_pred CHHHHHHHHHhCCcEEEECCCCCHHHHHHHHHHH---HhcCCCCEEEE-------------------ecCC-CCCCChHH
Confidence 36799999999999999998764 2333444332 11111122222 2200 11111111
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHH---HHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQ---AATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~---~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
=.-..+..+.+++++ .+=+.|+..++. +|.+.|... +....+....++++++. .-+++++|.++++.
T Consensus 159 ~NL~~i~~L~~~f~~----~vG~SDHt~g~~~~~~AvalGA~v--IEKHfTldr~~~g~Dh~----~Sl~p~el~~lv~~ 228 (241)
T PF03102_consen 159 VNLRVIPTLKERFGV----PVGYSDHTDGIEAPIAAVALGARV--IEKHFTLDRNLKGPDHK----FSLEPDELKQLVRD 228 (241)
T ss_dssp --TTHHHHHHHHSTS----EEEEEE-SSSSHHHHHHHHTT-SE--EEEEB-S-TTSCSTTGC----CCB-HHHHHHHHHH
T ss_pred cChHHHHHHHHhcCC----CEEeCCCCCCcHHHHHHHHcCCeE--EEEEEECCCCCCCCChh----hcCCHHHHHHHHHH
Confidence 122456666667774 245667664432 444556554 44455544445555543 34688999999887
Q ss_pred hhh
Q 019226 340 VVA 342 (344)
Q Consensus 340 ~~~ 342 (344)
...
T Consensus 229 ir~ 231 (241)
T PF03102_consen 229 IRE 231 (241)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 281
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=55.70 E-value=55 Score=30.55 Aligned_cols=124 Identities=13% Similarity=0.157 Sum_probs=64.9
Q ss_pred HHHHHHHHHcCCeEEEEeCCCh-hhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC
Q 019226 185 LRLMDEAKAAGKKVAVCSAATK-SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP 263 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~-~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 263 (344)
.++|+.+.+.|.++.+.|+-.. ..++..++.+ ......+.++- -+...++-|
T Consensus 137 ~plik~iA~~~kPiIlSTGma~~~ei~~av~~~---r~~g~~~i~LL------------------------hC~s~YPap 189 (347)
T COG2089 137 LPLIKYIAKKGKPIILSTGMATIEEIEEAVAIL---RENGNPDIALL------------------------HCTSAYPAP 189 (347)
T ss_pred hHHHHHHHhcCCCEEEEcccccHHHHHHHHHHH---HhcCCCCeEEE------------------------EecCCCCCC
Confidence 5788888888999999888654 2233333332 23222333333 233333444
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHH---HHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQ---AATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~---~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
--++=...+..+.-..+-.+=+.|+--++. +|.+.|.. ++....+.....+++++.+. +++++|++++++.
T Consensus 190 ~ed~NL~~i~~l~~~Fn~~vGlSDHT~g~~a~l~AvALGA~--viEKHFtldk~~~GpD~~fS----ldP~efk~mv~~i 263 (347)
T COG2089 190 FEDVNLKAIPKLAEAFNAIVGLSDHTLGILAPLAAVALGAS--VIEKHFTLDKSREGPDHAFS----LDPDEFKEMVDAI 263 (347)
T ss_pred HHHhhHHHHHHHHHHhCCccccccCccchhHHHHHHHhccc--ceeeeeeecCCCCCCCccee----cCHHHHHHHHHHH
Confidence 333333333333222222244556654443 45555665 34445555555566665553 4778888887765
Q ss_pred h
Q 019226 341 V 341 (344)
Q Consensus 341 ~ 341 (344)
.
T Consensus 264 r 264 (347)
T COG2089 264 R 264 (347)
T ss_pred H
Confidence 4
No 282
>PRK08185 hypothetical protein; Provisional
Probab=55.60 E-value=74 Score=29.22 Aligned_cols=99 Identities=15% Similarity=0.028 Sum_probs=63.9
Q ss_pred HHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCC
Q 019226 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPD 264 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~ 264 (344)
.++|...++.||-|+.+.-.+.+.++.+++.. . .. ....++.+ ..|. .-..+.+-
T Consensus 2 ~~~L~~A~~~~yaV~AfN~~n~e~~~avi~AA-e--e~-~sPvIl~~-------~~~~--------------~~~~~~~~ 56 (283)
T PRK08185 2 KELLKVAKEHQFAVGAFNVADSCFLRAVVEEA-E--AN-NAPAIIAI-------HPNE--------------LDFLGDNF 56 (283)
T ss_pred HHHHHHHHHcCceEEEEEeCCHHHHHHHHHHH-H--Hh-CCCEEEEe-------Ccch--------------hhhccHHH
Confidence 57888999999999988888888888888776 2 21 12344441 1111 00012223
Q ss_pred HHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 265 PSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 265 ~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
..+...++++..++ =+++. |.+..++..|..+|+++|++.....
T Consensus 57 ~~~~~~~a~~~~vP--V~lHLDHg~~~e~i~~ai~~Gf~SVM~D~S~l 102 (283)
T PRK08185 57 FAYVRERAKRSPVP--FVIHLDHGATIEDVMRAIRCGFTSVMIDGSLL 102 (283)
T ss_pred HHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHcCCCEEEEeCCCC
Confidence 45556666777664 34455 5556789999999999999976654
No 283
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=55.21 E-value=63 Score=30.39 Aligned_cols=125 Identities=13% Similarity=0.154 Sum_probs=68.1
Q ss_pred HHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc---eeecccchhhhhccCCcCCccccccccCCCCCCCC
Q 019226 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD---CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQK 261 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (344)
.++|+.+.+.|.+|.+-|+... ..++....--+... +.+ .++ .+|.. .......
T Consensus 123 ~pLL~~~A~~gkPvilStGmat--l~Ei~~Av~~i~~~-G~~~~~i~l-------------------lhC~s-~YP~~~~ 179 (329)
T TIGR03569 123 APLLKKIARFGKPVILSTGMAT--LEEIEAAVGVLRDA-GTPDSNITL-------------------LHCTT-EYPAPFE 179 (329)
T ss_pred HHHHHHHHhcCCcEEEECCCCC--HHHHHHHHHHHHHc-CCCcCcEEE-------------------EEECC-CCCCCcc
Confidence 6899999999999999988753 33333332111111 111 222 23321 1222222
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH---HHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 262 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQA---ATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 262 KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~---a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
.-+-..+..+.++++++ +-+.|+..++.+ |.++|.. ++....+....+.+++ +..-+++++|.++++
T Consensus 180 ~~nL~~I~~Lk~~f~~p----VG~SdHt~G~~~~~aAvalGA~--iIEkH~tldk~~~G~D----~~~Sl~p~el~~lv~ 249 (329)
T TIGR03569 180 DVNLNAMDTLKEAFDLP----VGYSDHTLGIEAPIAAVALGAT--VIEKHFTLDKNLPGPD----HKASLEPDELKEMVQ 249 (329)
T ss_pred cCCHHHHHHHHHHhCCC----EEECCCCccHHHHHHHHHcCCC--EEEeCCChhhcCCCCC----hhhcCCHHHHHHHHH
Confidence 33456666666666642 333555545444 4445666 4555555554444444 345568899999998
Q ss_pred Hhhh
Q 019226 339 NVVA 342 (344)
Q Consensus 339 ~~~~ 342 (344)
....
T Consensus 250 ~ir~ 253 (329)
T TIGR03569 250 GIRN 253 (329)
T ss_pred HHHH
Confidence 7653
No 284
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=54.34 E-value=1.6e+02 Score=27.00 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=63.9
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP 263 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 263 (344)
+.++|+..++.||-|..+.-.+.+.++.+++.. . .. .-..++.+ +......-+
T Consensus 4 ~k~ll~~A~~~~yAV~AfN~~n~e~~~avi~AA-e--e~-~sPvIlq~-----------------------s~~~~~~~~ 56 (282)
T TIGR01858 4 TKYMLQDAQAGGYAVPAFNIHNLETIQAVVETA-A--EM-RSPVILAG-----------------------TPGTFKHAG 56 (282)
T ss_pred HHHHHHHHHHcCCeEEEEEeCCHHHHHHHHHHH-H--Hh-CCCEEEEe-----------------------CccHHhhCC
Confidence 678899999999999988888888888888776 2 21 12344441 111100111
Q ss_pred ---CHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 264 ---DPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 264 ---~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
-..+...++++..++ =+++. |.+..++..|..+|+++||+.....
T Consensus 57 ~~~~~~~~~~~a~~~~VP--ValHLDHg~~~e~i~~ai~~GFtSVM~DgS~l 106 (282)
T TIGR01858 57 TEYIVALCSAASTTYNMP--LALHLDHHESLDDIRQKVHAGVRSAMIDGSHF 106 (282)
T ss_pred HHHHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHcCCCEEeecCCCC
Confidence 124555666677663 34455 5566789999999999999986554
No 285
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=52.96 E-value=2.6e+02 Score=30.00 Aligned_cols=29 Identities=14% Similarity=0.234 Sum_probs=20.3
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCC
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAA 204 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~ 204 (344)
......+++.+.++.....|..++++.-+
T Consensus 683 ~~~~~~~~i~~~~~~~e~~g~tvv~v~vn 711 (951)
T KOG0207|consen 683 NGCSIPDDILDALTESERKGQTVVYVAVN 711 (951)
T ss_pred cCCCCchhHHHhhhhHhhcCceEEEEEEC
Confidence 34566677888888888888777666543
No 286
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=51.81 E-value=85 Score=31.71 Aligned_cols=35 Identities=31% Similarity=0.481 Sum_probs=26.8
Q ss_pred HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 269 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 269 ~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
..-+++.|++ ++|||+.. ...|..+|+..+++.++
T Consensus 148 v~~lk~~G~~----~vvG~~~~-~~~A~~~g~~g~~~~s~ 182 (538)
T PRK15424 148 INELKANGIE----AVVGAGLI-TDLAEEAGMTGIFIYSA 182 (538)
T ss_pred HHHHHHCCCC----EEEcCchH-HHHHHHhCCceEEecCH
Confidence 3444556664 78899887 77899999999998865
No 287
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=50.66 E-value=1.9e+02 Score=26.06 Aligned_cols=29 Identities=21% Similarity=0.217 Sum_probs=19.6
Q ss_pred CccCccHHHHHHHHHH---cCCeEEEEeCCCh
Q 019226 178 VEPRPGVLRLMDEAKA---AGKKVAVCSAATK 206 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~---~g~~v~ivTn~~~ 206 (344)
+...++..++.+.+++ .+-++.+.|+...
T Consensus 109 ~~~v~~~~ea~~~~~~~~~~~~~i~lttG~k~ 140 (256)
T TIGR00715 109 IIEVPDIEEATRVAYQPYLRGKRVFLTAGASW 140 (256)
T ss_pred eEEeCCHHHHHHHhhhccccCCcEEEecCcch
Confidence 4566677788877776 4456777776655
No 288
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=49.96 E-value=86 Score=28.76 Aligned_cols=103 Identities=18% Similarity=0.204 Sum_probs=66.4
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
.+.++|+..+++||-+.-+--.+.+.+..+++.. . .. .-..++. +.+|.. .-.+..+
T Consensus 5 ~~~~ll~~Ake~~yAvpAfN~~nlE~~~AileaA-~--e~-~sPvIiq-------~S~g~~------------~y~gg~~ 61 (286)
T COG0191 5 SMKELLDKAKENGYAVPAFNINNLETLQAILEAA-E--EE-KSPVIIQ-------FSEGAA------------KYAGGAD 61 (286)
T ss_pred cHHHHHHHHHHcCCceeeeeecCHHHHHHHHHHH-H--Hh-CCCEEEE-------ecccHH------------HHhchHH
Confidence 3588999999999999776656666677777775 2 11 1244444 223321 0011012
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
--..+...+++.++++ =+++. |++..++.-|-++|+++||+.....
T Consensus 62 ~~~~~v~~~a~~~~vP--V~lHlDHg~~~~~~~~ai~~GFsSvMiDgS~~ 109 (286)
T COG0191 62 SLAHMVKALAEKYGVP--VALHLDHGASFEDCKQAIRAGFSSVMIDGSHL 109 (286)
T ss_pred HHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHhcCCceEEecCCcC
Confidence 2235566777788863 35555 6778899999999999999976554
No 289
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=49.86 E-value=7.5 Score=40.64 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=32.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.|.+.+.+.+...|..|+++..+|+.-.-.++...+..
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~v 627 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSV 627 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhhe
Confidence 57778899999999999999999998777777766665
No 290
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=48.20 E-value=2.5e+02 Score=26.73 Aligned_cols=126 Identities=13% Similarity=0.104 Sum_probs=69.5
Q ss_pred HHHHHHHHHcCCeEEEEeCC--ChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccc-cccCCCCCCCC
Q 019226 185 LRLMDEAKAAGKKVAVCSAA--TKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCV-CAHQGDDVKQK 261 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~--~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 261 (344)
.++|+++.+.|.+|.+-|+- +.......++.+ .....-+.+++ . |..+-...+..
T Consensus 215 ~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i---~~~Gn~~i~L~-------------------erg~s~yp~~~~~ 272 (360)
T PRK12595 215 FELLKAAGRVNKPVLLKRGLSATIEEFIYAAEYI---MSQGNGQIILC-------------------ERGIRTYEKATRN 272 (360)
T ss_pred HHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHHH---HHCCCCCEEEE-------------------CCccCCCCCCCCC
Confidence 58999999999999988885 344444444443 11110122222 1 11111112233
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEE-----EecCHh---hHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHH
Q 019226 262 KPDPSIYVTAAKRLGISEKDCLV-----VEDSVI---GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 333 (344)
Q Consensus 262 KP~~~~~~~~~~~lgv~~~~~i~-----vGDs~~---Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l 333 (344)
..+-..+..+-+.++++ +++ .|+... =..+|.++|...+++...... ..+. .++..-+++++|
T Consensus 273 ~ldl~~i~~lk~~~~~P---V~~d~~Hs~G~r~~~~~~a~aAva~GAdg~~iE~H~dp--~~a~----~D~~~sl~p~el 343 (360)
T PRK12595 273 TLDISAVPILKQETHLP---VMVDVTHSTGRRDLLLPTAKAALAIGADGVMAEVHPDP--AVAL----SDSAQQMDIPEF 343 (360)
T ss_pred CcCHHHHHHHHHHhCCC---EEEeCCCCCcchhhHHHHHHHHHHcCCCeEEEEecCCC--CCCC----CchhhhCCHHHH
Confidence 45677777777777764 333 233222 123467889987777655522 2223 234455688999
Q ss_pred HHHHHHhh
Q 019226 334 ELLLQNVV 341 (344)
Q Consensus 334 ~~ll~~~~ 341 (344)
.+|++++.
T Consensus 344 ~~l~~~i~ 351 (360)
T PRK12595 344 DRFLDELK 351 (360)
T ss_pred HHHHHHHH
Confidence 99988764
No 291
>PRK07084 fructose-bisphosphate aldolase; Provisional
Probab=48.12 E-value=1.2e+02 Score=28.34 Aligned_cols=102 Identities=15% Similarity=0.059 Sum_probs=64.1
Q ss_pred ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC-CCC
Q 019226 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD-VKQ 260 (344)
Q Consensus 182 pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 260 (344)
-.+.++|+..++.||-|....-.+.+.++.+++.. . .. .-..++.+ +.. ...
T Consensus 10 v~~k~lL~~A~~~~yAV~AfN~~n~e~~~avi~AA-e--e~-~sPvIlq~-----------------------s~~~~~~ 62 (321)
T PRK07084 10 VNTREMFAKAVKGGYAIPAYNFNNMEQLQAIIQAC-V--ET-KSPVILQV-----------------------SKGARKY 62 (321)
T ss_pred cCHHHHHHHHHHCCceEEEEEeCCHHHHHHHHHHH-H--Hh-CCCEEEEe-----------------------chhHHhh
Confidence 34789999999999999988877888888888776 2 21 12344441 111 111
Q ss_pred -C----CCCHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 261 -K----KPDPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 261 -~----KP~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+ +.-...+...+++.++..-=+++. |++...+..|..+|+++|++.....
T Consensus 63 ~g~~~~~~~~~~~~~~a~~a~~~VPV~lHLDHg~~~e~i~~ai~~GftSVMiD~S~l 119 (321)
T PRK07084 63 ANATLLRYMAQGAVEYAKELGCPIPIVLHLDHGDSFELCKDCIDSGFSSVMIDGSHL 119 (321)
T ss_pred CCchHHHHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHcCCCEEEeeCCCC
Confidence 1 111222344455554333445555 5566788999999999999986654
No 292
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=47.75 E-value=1.7e+02 Score=26.39 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=54.2
Q ss_pred ccCccHHHHHHHHHHcCCeEE-EEeCCCh-hhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVA-VCSAATK-SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~-ivTn~~~-~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.+.+...++++.++++|+..+ +++-... ..++.+.+.. .+|-.++++ +|- +|.
T Consensus 124 lp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~------~gfiy~vs~--------~G~-----------TG~ 178 (256)
T TIGR00262 124 LPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS------QGFVYLVSR--------AGV-----------TGA 178 (256)
T ss_pred CChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC------CCCEEEEEC--------CCC-----------CCC
Confidence 355678889999999999866 4444343 2333444432 123344441 111 021
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCC
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~ 309 (344)
......+-.+.+..+.+..+. -+++|=+. .++..+..+|...|.+.+..
T Consensus 179 ~~~~~~~~~~~i~~lr~~~~~----pi~vgfGI~~~e~~~~~~~~GADgvVvGSai 230 (256)
T TIGR00262 179 RNRAASALNELVKRLKAYSAK----PVLVGFGISKPEQVKQAIDAGADGVIVGSAI 230 (256)
T ss_pred cccCChhHHHHHHHHHhhcCC----CEEEeCCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 111112223334444333332 36676655 48999999999988875443
No 293
>PF12522 UL73_N: Cytomegalovirus glycoprotein N terminal; InterPro: IPR021003 This domain family is found in viruses, and is approximately 30 amino acids in length. The signature is found in association with PF03554 from PFAM. This family is an envelope glycoprotein of (Human herpesvirus 5) [].
Probab=46.53 E-value=11 Score=20.86 Aligned_cols=21 Identities=43% Similarity=0.393 Sum_probs=11.6
Q ss_pred hhhcccccccCCcccccCCCC
Q 019226 6 ILSQTATLSSSSSSTTTTAKF 26 (344)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~ 26 (344)
.+|.++..++.++|+++++.+
T Consensus 5 vlSv~~gSs~n~sSTsts~tt 25 (27)
T PF12522_consen 5 VLSVAAGSSGNNSSTSTSATT 25 (27)
T ss_pred EEEEEeccccCCccccccccC
Confidence 455566665555555555443
No 294
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=46.51 E-value=30 Score=30.79 Aligned_cols=35 Identities=6% Similarity=0.036 Sum_probs=30.0
Q ss_pred ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 182 pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
|.+.+++++++++|+.++++|+.....++.+.+.+
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~ 58 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQK 58 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcC
Confidence 56778888999999999999999988888887765
No 295
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=46.45 E-value=13 Score=30.86 Aligned_cols=17 Identities=24% Similarity=0.397 Sum_probs=14.4
Q ss_pred CccEEEEecCccccccc
Q 019226 66 SLQALIFDCDGVIIESE 82 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~ 82 (344)
.-..+++|+|.||+.+.
T Consensus 5 ~kl~LVLDLDeTLihs~ 21 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTT 21 (156)
T ss_pred CceEEEEeCCCCccccc
Confidence 45689999999999875
No 296
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=46.17 E-value=1.9e+02 Score=27.22 Aligned_cols=65 Identities=20% Similarity=0.243 Sum_probs=35.8
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCHhhHH-HHHHcCCeEEEEeCCCchhhh-ccccccccCCccccCHHHHHHHHHHhh
Q 019226 266 SIYVTAAKRLGISEKDCLVVEDSVIGLQ-AATRAGMACVITYTSSTAEQD-FKDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 266 ~~~~~~~~~lgv~~~~~i~vGDs~~Di~-~a~~aG~~~v~v~~~~~~~~~-l~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
.-|..+++... ++||||. .++ .|-..|..+|-+-......+. .......++ .+.+++.+.+++..
T Consensus 250 ~~~l~ll~~a~------~vvgdSs-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvlv~----~~~~~I~~ai~~~l 316 (346)
T PF02350_consen 250 EEYLSLLKNAD------LVVGDSS-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVLVG----TDPEAIIQAIEKAL 316 (346)
T ss_dssp HHHHHHHHHES------EEEESSH-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEEET----SSHHHHHHHHHHHH
T ss_pred HHHHHHHhcce------EEEEcCc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEEeC----CCHHHHHHHHHHHH
Confidence 34455555443 6899999 888 999999999887333332222 222222233 35566666555544
No 297
>PLN02951 Molybderin biosynthesis protein CNX2
Probab=45.55 E-value=1.3e+02 Score=28.69 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=24.3
Q ss_pred CCCccCccHHHHHHHHHHc-CCe-EEEEeCCCh
Q 019226 176 GTVEPRPGVLRLMDEAKAA-GKK-VAVCSAATK 206 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~-g~~-v~ivTn~~~ 206 (344)
+...+.+++.++++.+++. |+. +.+.||+..
T Consensus 115 GEPllr~dl~eli~~l~~~~gi~~i~itTNG~l 147 (373)
T PLN02951 115 GEPTLRKDIEDICLQLSSLKGLKTLAMTTNGIT 147 (373)
T ss_pred CCCcchhhHHHHHHHHHhcCCCceEEEeeCcch
Confidence 3455678899999999986 885 888899865
No 298
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=45.34 E-value=38 Score=35.07 Aligned_cols=56 Identities=20% Similarity=0.288 Sum_probs=40.8
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNG 241 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~ 241 (344)
..+...+.|++|+++|++++++|+.....+....+.+ ++. +.+++.+|+++...++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~L-gl~-----~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNEL-GIK-----DPFITENGGAIFIPKD 489 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CCC-----CeEEEcCCCEEEECCC
Confidence 3456788999999999999999999998888877776 332 3466655555544443
No 299
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=44.51 E-value=2.5e+02 Score=25.74 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=63.5
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
.+.++|+..++.||-+..+.-.+.+.++.+++.. +.. ....++.+ +......-
T Consensus 5 ~~~~~l~~A~~~~yaV~AfN~~n~e~~~avi~AA---ee~-~sPvIiq~-----------------------~~~~~~~~ 57 (284)
T PRK12737 5 STKNMLKKAQAEGYAVPAFNIHNLETLQVVVETA---AEL-RSPVILAG-----------------------TPGTFSYA 57 (284)
T ss_pred cHHHHHHHHHHcCceEEEEEeCCHHHHHHHHHHH---HHh-CCCEEEEc-----------------------CccHHhhC
Confidence 3678999999999999988888888888888776 221 12444441 11111011
Q ss_pred C---CHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 263 P---DPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 263 P---~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+ -..+...++++..++ =+++. |.+..++..|.++|+++|++.....
T Consensus 58 g~~~~~~~~~~~a~~~~VP--ValHLDH~~~~e~i~~ai~~GftSVMiDgS~l 108 (284)
T PRK12737 58 GTDYIVAIAEVAARKYNIP--LALHLDHHEDLDDIKKKVRAGIRSVMIDGSHL 108 (284)
T ss_pred CHHHHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHcCCCeEEecCCCC
Confidence 1 123455666677663 34454 4445688899999999999976553
No 300
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=44.03 E-value=2.4e+02 Score=25.26 Aligned_cols=44 Identities=25% Similarity=0.375 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHh--hHHHHHHcCCeEEEEeC
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVEDSVI--GLQAATRAGMACVITYT 307 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~--Di~~a~~aG~~~v~v~~ 307 (344)
.-|-|..-+.+++..|+ .|++|||.+. +-......|++.+.+..
T Consensus 72 a~PGP~~ARE~l~~~~i---P~IvI~D~p~~K~~d~l~~~g~GYIivk~ 117 (277)
T PRK00994 72 AAPGPKKAREILKAAGI---PCIVIGDAPGKKVKDAMEEQGLGYIIVKA 117 (277)
T ss_pred CCCCchHHHHHHHhcCC---CEEEEcCCCccchHHHHHhcCCcEEEEec
Confidence 45667777888888887 6899999984 67888999999887754
No 301
>PLN02887 hydrolase family protein
Probab=43.74 E-value=35 Score=34.74 Aligned_cols=40 Identities=20% Similarity=0.291 Sum_probs=35.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
.+.+...+.|++|+++|++++++|+.....+...++.+ ++
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L-~l 364 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMV-DL 364 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-Cc
Confidence 46788899999999999999999999998888888776 44
No 302
>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]
Probab=43.09 E-value=24 Score=31.43 Aligned_cols=46 Identities=30% Similarity=0.345 Sum_probs=35.7
Q ss_pred CCCCH----HHHHHHHHHcCCCC--CcEEEEecCH-hhHHHHHHcCCeEEEEeC
Q 019226 261 KKPDP----SIYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYT 307 (344)
Q Consensus 261 ~KP~~----~~~~~~~~~lgv~~--~~~i~vGDs~-~Di~~a~~aG~~~v~v~~ 307 (344)
-||.| +.|..-++.+|++| +++=||.|+. +--.+|-..||. ||++.
T Consensus 85 lKPsP~NiQeLYL~SL~~lGid~~~HDIRFVEDnWE~PTlGawGlGWE-VWldG 137 (298)
T COG0752 85 IKPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWENPTLGAWGLGWE-VWLDG 137 (298)
T ss_pred ecCCCccHHHHHHHHHHHcCCChhhcceeeeccCCCCCccccccccee-EEEcC
Confidence 47776 56777889999986 6899999998 566688888888 46654
No 303
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=42.97 E-value=30 Score=31.34 Aligned_cols=37 Identities=8% Similarity=-0.014 Sum_probs=31.5
Q ss_pred ccCccHHHHHHHHHH-cCCeEEEEeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKA-AGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~-~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
.+.+.+.+.|+.|++ .|++++|+|+.....+...++.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~ 73 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKP 73 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCc
Confidence 577889999999998 6999999999999877766644
No 304
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=42.63 E-value=17 Score=25.09 Aligned_cols=24 Identities=21% Similarity=0.347 Sum_probs=15.1
Q ss_pred HHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 019226 269 VTAAKRLGISEKDCLVVEDSVIGLQAAT 296 (344)
Q Consensus 269 ~~~~~~lgv~~~~~i~vGDs~~Di~~a~ 296 (344)
.+.++++|+ .+++||..+|+++..
T Consensus 8 qQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 8 QQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHCCE----EEEeCChHHHHHHHH
Confidence 567888887 589999999999875
No 305
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=42.15 E-value=2.4e+02 Score=25.81 Aligned_cols=97 Identities=19% Similarity=0.159 Sum_probs=60.6
Q ss_pred HHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC-
Q 019226 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP- 263 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP- 263 (344)
.++|+..++.||-|....-.+...++.+++.. . .. ....++.+ +.......+
T Consensus 2 k~lL~~A~~~~yaV~AfN~~n~e~~~avi~AA-e--~~-~sPvIi~~-----------------------~~~~~~~~~~ 54 (276)
T cd00947 2 KELLKKAREGGYAVGAFNINNLETLKAILEAA-E--ET-RSPVILQI-----------------------SEGAIKYAGL 54 (276)
T ss_pred HHHHHHHHHCCceEEEEeeCCHHHHHHHHHHH-H--Hh-CCCEEEEc-----------------------CcchhhhCCH
Confidence 57888999999999888777778888887776 2 21 12445442 111111112
Q ss_pred --CHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 264 --DPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 264 --~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
-..+...++++..++ =+++. |.+..++..|.++|+++||+.....
T Consensus 55 ~~~~~~~~~~a~~~~VP--V~lHLDH~~~~~~i~~ai~~GftSVMiD~S~l 103 (276)
T cd00947 55 ELLVAMVKAAAERASVP--VALHLDHGSSFELIKRAIRAGFSSVMIDGSHL 103 (276)
T ss_pred HHHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHhCCCEEEeCCCCC
Confidence 223444555555553 34444 4445788999999999999986554
No 306
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=41.61 E-value=2.6e+02 Score=25.99 Aligned_cols=98 Identities=13% Similarity=0.082 Sum_probs=61.2
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
.+.++|+..++.||-++.+.-.+.+.++.+++.. . .. ....++.+ +......-
T Consensus 4 ~~k~lL~~A~~~~yaV~AfN~~n~e~~~avi~AA-e--~~-~sPvIlq~-----------------------s~~~~~~~ 56 (307)
T PRK05835 4 KGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAG-N--EE-NSPLFIQA-----------------------SEGAIKYM 56 (307)
T ss_pred CHHHHHHHHHHCCceEEEEEECCHHHHHHHHHHH-H--HH-CCCEEEEc-----------------------CccHHhhC
Confidence 3678999999999999988888888888888776 2 21 12444441 11111111
Q ss_pred C---CHHHHHHHHHHcC-CCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 263 P---DPSIYVTAAKRLG-ISEKDCLVV--EDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 263 P---~~~~~~~~~~~lg-v~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
+ -..+...++++.. + .=+++. |.+..++..|..+|+++||+....
T Consensus 57 g~~~~~~~~~~~a~~~~~V--PValHLDHg~~~e~i~~ai~~GftSVM~DgS~ 107 (307)
T PRK05835 57 GIDMAVGMVKIMCERYPHI--PVALHLDHGTTFESCEKAVKAGFTSVMIDASH 107 (307)
T ss_pred ChHHHHHHHHHHHHhcCCC--eEEEECCCCCCHHHHHHHHHcCCCEEEEeCCC
Confidence 1 1233344445443 4 334555 555678889999999999998655
No 307
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=41.26 E-value=2.9e+02 Score=25.43 Aligned_cols=105 Identities=15% Similarity=0.129 Sum_probs=62.5
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
.+.++|+..++.||-|..+.-.+.+.++.+++.. +.. ....++.+ ..+.. ......+
T Consensus 5 ~~k~iL~~A~~~~yAV~AfN~~n~e~~~avi~AA---ee~-~sPvIlq~-------~~~~~------------~~~~g~~ 61 (288)
T TIGR00167 5 DVKELLQDAKEEGYAIPAFNINNLETINAVLEAA---AEE-KSPVIIQF-------SNGAA------------KYIAGLG 61 (288)
T ss_pred cHHHHHHHHHHCCceEEEEEECCHHHHHHHHHHH---HHH-CCCEEEEC-------Ccchh------------hccCCHH
Confidence 4678999999999999888777788788888776 221 12344441 11110 0000011
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
.-..+...++++.+.+-.=+++. |.+..++..|.++|+++|++.....
T Consensus 62 ~~~~~~~~~a~~~~~~VPV~lHLDHg~~~e~i~~ai~~GftSVMiDgS~l 111 (288)
T TIGR00167 62 AISAMVKAMSEAYPYGVPVALHLDHGASEEDCAQAVKAGFSSVMIDGSHE 111 (288)
T ss_pred HHHHHHHHHHHhccCCCcEEEECCCCCCHHHHHHHHHcCCCEEEecCCCC
Confidence 12234445555663322344555 4455688889999999999986554
No 308
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=41.05 E-value=2.9e+02 Score=25.41 Aligned_cols=101 Identities=17% Similarity=0.194 Sum_probs=63.3
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP 263 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 263 (344)
+.++|+..++.||-+..+.-.+.+.++.+++.. +.. .-..++.+ ..|.+ ...+ .+.
T Consensus 6 ~k~iL~~A~~~~yAV~AfN~~n~e~~~avi~AA---ee~-~sPvIlq~-------s~~~~------------~~~~-~~~ 61 (286)
T PRK12738 6 TKYLLQDAQANGYAVPAFNIHNAETIQAILEVC---SEM-RSPVILAG-------TPGTF------------KHIA-LEE 61 (286)
T ss_pred HHHHHHHHHHCCceEEEEEeCCHHHHHHHHHHH---HHH-CCCEEEEc-------Ccchh------------hhCC-HHH
Confidence 678999999999999888877888888888776 221 12344441 11110 0000 111
Q ss_pred CHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 264 DPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
-..+...++++.+++ =+++. |.+...+..|..+|+++|++.....
T Consensus 62 ~~~~~~~~a~~~~VP--ValHLDHg~~~e~i~~ai~~GFtSVM~DgS~l 108 (286)
T PRK12738 62 IYALCSAYSTTYNMP--LALHLDHHESLDDIRRKVHAGVRSAMIDGSHF 108 (286)
T ss_pred HHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHcCCCeEeecCCCC
Confidence 124455566666663 34555 5556788888999999999976554
No 309
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=40.61 E-value=45 Score=29.29 Aligned_cols=29 Identities=14% Similarity=0.184 Sum_probs=22.4
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChhhHHHHH
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCL 213 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l 213 (344)
|.++|..|+++ +.|++|++++-.-..+-+
T Consensus 1 M~~~L~~L~~~-~~vgvVgGsd~~k~~eQl 29 (220)
T PF03332_consen 1 MAELLQKLRKK-VPVGVVGGSDLPKIQEQL 29 (220)
T ss_dssp HHHHHHHHHTT-SEEEEEESS-HHHHHHHH
T ss_pred CHHHHHHHHhc-CeEEEEcchhHHHHHHHH
Confidence 56889999986 999999999876555444
No 310
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=40.46 E-value=40 Score=29.69 Aligned_cols=12 Identities=25% Similarity=0.454 Sum_probs=7.4
Q ss_pred EEecCccccccc
Q 019226 71 IFDCDGVIIESE 82 (344)
Q Consensus 71 iFD~DGTL~d~~ 82 (344)
+||.||||.+..
T Consensus 1 ~lDyDGTL~p~~ 12 (235)
T PF02358_consen 1 FLDYDGTLAPIV 12 (235)
T ss_dssp EEE-TTTSS---
T ss_pred CcccCCccCCCC
Confidence 689999998764
No 311
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=39.74 E-value=3.8e+02 Score=26.74 Aligned_cols=29 Identities=34% Similarity=0.305 Sum_probs=23.4
Q ss_pred CCcEEEEecCHhhHHHHHHc---CCeEEEEeC
Q 019226 279 EKDCLVVEDSVIGLQAATRA---GMACVITYT 307 (344)
Q Consensus 279 ~~~~i~vGDs~~Di~~a~~a---G~~~v~v~~ 307 (344)
.-+++.||-++..+.+|..+ |.+++.+..
T Consensus 211 ~~dvvIIGgGpaGl~aA~~la~~G~~v~li~~ 242 (517)
T PRK15317 211 PYDVLVVGGGPAGAAAAIYAARKGIRTGIVAE 242 (517)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEec
Confidence 45899999999999888765 888877753
No 312
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=39.69 E-value=3e+02 Score=25.19 Aligned_cols=99 Identities=16% Similarity=0.139 Sum_probs=63.1
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
.+.++|+..++.||-|+.+.-.+.+.++.+++.. . .. .-..++.+ +.......
T Consensus 5 ~~~~~l~~A~~~~yaV~Afn~~n~e~~~avi~aA-e--~~-~~Pvii~~-----------------------~~~~~~~~ 57 (281)
T PRK06806 5 QMKELLKKANQENYGVGAFSVANMEMVMGAIKAA-E--EL-NSPIILQI-----------------------AEVRLNHS 57 (281)
T ss_pred cHHHHHHHHHHCCceEEEEEeCCHHHHHHHHHHH-H--Hh-CCCEEEEc-----------------------CcchhccC
Confidence 3678999999999999988888888888888776 2 21 12444441 11111112
Q ss_pred CCH---HHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 263 PDP---SIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 263 P~~---~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
|.. .++..++++..++ =+++. |.+...+..|..+|+++|++.....
T Consensus 58 ~~~~~~~~~~~~a~~~~vp--v~lHlDH~~~~e~i~~Al~~G~tsVm~d~s~~ 108 (281)
T PRK06806 58 PLHLIGPLMVAAAKQAKVP--VAVHFDHGMTFEKIKEALEIGFTSVMFDGSHL 108 (281)
T ss_pred ChHHHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHcCCCEEEEcCCCC
Confidence 222 3455566666663 33343 4445678888889999999976654
No 313
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=39.21 E-value=2e+02 Score=22.94 Aligned_cols=110 Identities=20% Similarity=0.196 Sum_probs=51.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChh-hHHHHHHHhhccchhcc-cceeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKS-SVILCLENLIGMERFEG-LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~-~~~~~l~~l~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.....+.+++.+...+|-++.++-|+... ...+....+.+.-.+.. ....+.. .++. + .. .+.
T Consensus 19 ~~i~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l------~~~~-~----~~----~~~ 83 (138)
T PF13580_consen 19 EAIEKAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIAL------NDDA-L----TA----ISN 83 (138)
T ss_dssp HHHHHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEET------TSTH-H----HH----HHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCccccccccc------ccch-H----hh----hhc
Confidence 33445667777777888889888877543 23444444433221110 0111110 0000 0 00 011
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEE----ecCHhhHH---HHHHcCCeEEEEe
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVV----EDSVIGLQ---AATRAGMACVITY 306 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~v----GDs~~Di~---~a~~aG~~~v~v~ 306 (344)
+.. -++.+-+.+...+.+.|.+++++ |.+++=++ .|+..|+.+|.+.
T Consensus 84 ~~~---~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 84 DLE---YDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp HTT---GGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred ccc---hhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 111 12345567777778889998886 67776554 4555699998764
No 314
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=39.20 E-value=1.2e+02 Score=27.78 Aligned_cols=47 Identities=15% Similarity=0.147 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc
Q 019226 265 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 265 ~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
..-+..++++.|. +. +.| |+..|+....-.|..+|++..|..+++.+
T Consensus 227 s~rL~eiA~~~g~-~a--ylI-d~~~ei~~~w~~~~~~VGvTAGAStPd~l 273 (294)
T COG0761 227 SNRLAEIAKRHGK-PA--YLI-DDAEEIDPEWLKGVKTVGVTAGASTPDWL 273 (294)
T ss_pred HHHHHHHHHHhCC-Ce--EEe-CChHhCCHHHhcCccEEEEecCCCCCHHH
Confidence 4556777788887 33 333 67778888888888899998887765443
No 315
>PRK07315 fructose-bisphosphate aldolase; Provisional
Probab=38.29 E-value=2.1e+02 Score=26.44 Aligned_cols=102 Identities=10% Similarity=0.066 Sum_probs=64.5
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC-CCC-
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD-VKQ- 260 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 260 (344)
.+.++|+..++.||-|..+.-.+.+.++.+++.. . .. ....++.+ +.. ...
T Consensus 5 ~~~~~l~~A~~~~yav~AfN~~n~e~~~avi~aA-e--~~-~sPvIlq~-----------------------s~~~~~~~ 57 (293)
T PRK07315 5 SAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAA-E--AK-KAPVLIQT-----------------------SMGAAKYM 57 (293)
T ss_pred cHHHHHHHHHHCCceEEEEEECCHHHHHHHHHHH-H--HH-CCCEEEEc-----------------------CccHHhhc
Confidence 3678999999999999888777788788887776 2 21 12444441 111 111
Q ss_pred C--CCCHHHHHHHHHHcCCCCCcEEEEec-CHhhHHHHHHcCCeEEEEeCCCch
Q 019226 261 K--KPDPSIYVTAAKRLGISEKDCLVVED-SVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 261 ~--KP~~~~~~~~~~~lgv~~~~~i~vGD-s~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
+ +.-..+...++++.++.-.=++|.+= +...+..|..+|+++|++.....+
T Consensus 58 ~~~~~~~~~~~~~a~~~~~~vPV~lHLDH~~~~~i~~ai~~GftSVm~d~S~l~ 111 (293)
T PRK07315 58 GGYKVCKNLIENLVESMGITVPVAIHLDHGHYEDALECIEVGYTSIMFDGSHLP 111 (293)
T ss_pred CcHHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcCCCCC
Confidence 1 11245566677777443344566632 345788888999999999776543
No 316
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=37.55 E-value=31 Score=30.65 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=26.7
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
..-+.++..++++.+++.|+++.+.||+...
T Consensus 82 EPll~~~l~~li~~l~~~g~~v~leTNGtl~ 112 (238)
T TIGR03365 82 NPALQKPLGELIDLGKAKGYRFALETQGSVW 112 (238)
T ss_pred chhhhHhHHHHHHHHHHCCCCEEEECCCCCc
Confidence 3445678999999999999999999999874
No 317
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=37.40 E-value=1.1e+02 Score=33.09 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=30.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
++.+...+.+++|.+.+++.+.+|+.+-...--+.++.
T Consensus 705 kLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeC 742 (1140)
T KOG0208|consen 705 KLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKEC 742 (1140)
T ss_pred ccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcc
Confidence 57788999999999999999999998876555555553
No 318
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=36.58 E-value=2.7e+02 Score=23.66 Aligned_cols=89 Identities=13% Similarity=0.110 Sum_probs=43.1
Q ss_pred HHHHHHHHHHc--CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCC
Q 019226 184 VLRLMDEAKAA--GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQK 261 (344)
Q Consensus 184 v~~~l~~Lk~~--g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (344)
+.+++++|+++ |+++.+-|.... .....+.... +. ....+. +
T Consensus 37 ~~~Li~~l~~~~p~~~illT~~T~t--g~~~~~~~~~-~~---v~~~~~------------------------------P 80 (186)
T PF04413_consen 37 ARPLIKRLRKQRPDLRILLTTTTPT--GREMARKLLP-DR---VDVQYL------------------------------P 80 (186)
T ss_dssp HHHHHHHHTT---TS-EEEEES-CC--HHHHHHGG-G-GG----SEEE--------------------------------
T ss_pred HHHHHHHHHHhCCCCeEEEEecCCc--hHHHHHHhCC-CC---eEEEEe------------------------------C
Confidence 56788888876 788887777555 2222333211 11 122222 3
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCH--hhHHHHHHcCCeEEEEeCCCc
Q 019226 262 KPDPSIYVTAAKRLGISEKDCLVVEDSV--IGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 262 KP~~~~~~~~~~~lgv~~~~~i~vGDs~--~Di~~a~~aG~~~v~v~~~~~ 310 (344)
-..+......++++. |+-++.++-.. |=+..+++.|+..++++..-.
T Consensus 81 ~D~~~~~~rfl~~~~--P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls 129 (186)
T PF04413_consen 81 LDFPWAVRRFLDHWR--PDLLIWVETELWPNLLREAKRRGIPVVLVNARLS 129 (186)
T ss_dssp -SSHHHHHHHHHHH----SEEEEES----HHHHHH-----S-EEEEEE---
T ss_pred ccCHHHHHHHHHHhC--CCEEEEEccccCHHHHHHHhhcCCCEEEEeeeec
Confidence 334677788887764 78888887776 466777788999999875443
No 319
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=36.30 E-value=3.5e+02 Score=27.48 Aligned_cols=37 Identities=19% Similarity=0.011 Sum_probs=18.6
Q ss_pred ccCccHHHHHHHHHHcCCeE---EEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKV---AVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v---~ivTn~~~~~~~~~l~~l 216 (344)
..-|+|-+..++.... ++- ..+|-.++..+..++++.
T Consensus 105 vYTPtVg~ac~~~s~~-~r~p~Gly~s~~drg~i~~~l~Nw 144 (559)
T PTZ00317 105 IYTPTVGEACQNYSNL-FQRDRGLYLSRAHKGKIREILKNW 144 (559)
T ss_pred ecCcchHHHHHHHHhc-ccccCceEEeecCcchHHHHHhcC
Confidence 3446776666665543 211 123434455566666553
No 320
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=35.38 E-value=1.3e+02 Score=24.09 Aligned_cols=51 Identities=14% Similarity=0.118 Sum_probs=35.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCC-cEEEEecC----H---hhHHHHHHcCCeEEEEeCCCc
Q 019226 260 QKKPDPSIYVTAAKRLGISEK-DCLVVEDS----V---IGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~-~~i~vGDs----~---~Di~~a~~aG~~~v~v~~~~~ 310 (344)
...|.++-+...++.+|++++ .+|+.+++ . .-.-+++.+|..-|.+.+|+.
T Consensus 75 ~~~p~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG~ 133 (138)
T cd01445 75 SMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGF 133 (138)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCCH
Confidence 356778899999999999876 55556653 1 133355667888777766654
No 321
>PLN03017 trehalose-phosphatase
Probab=35.23 E-value=1.5e+02 Score=28.25 Aligned_cols=30 Identities=10% Similarity=0.286 Sum_probs=18.2
Q ss_pred ccEEEEecCccccc----cch-hHHHHHHHHHHhc
Q 019226 67 LQALIFDCDGVIIE----SEH-LHRQAYNDAFSHF 96 (344)
Q Consensus 67 ~k~viFD~DGTL~d----~~~-~~~~a~~~~~~~~ 96 (344)
--+|++|+||||++ .+. .+.+...+++.++
T Consensus 111 ~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~L 145 (366)
T PLN03017 111 QIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKL 145 (366)
T ss_pred CeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHH
Confidence 45778899999992 333 3334444445544
No 322
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=35.04 E-value=84 Score=25.69 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=23.4
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
..+++.++++.++++|+++.+.||...+
T Consensus 73 ~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~ 100 (147)
T TIGR02826 73 NREALLSLLKIFKEKGLKTCLYTGLEPK 100 (147)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCH
Confidence 3356889999999999999999997653
No 323
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=34.55 E-value=2.8e+02 Score=25.11 Aligned_cols=77 Identities=19% Similarity=0.343 Sum_probs=49.1
Q ss_pred CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHH
Q 019226 195 GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKR 274 (344)
Q Consensus 195 g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 274 (344)
-+.|+++|.++.....+++... .++. .+ | .|.+|| ++. ++.-| ++.
T Consensus 36 ~VEVVllSRNspdTGlRv~nSI---~hyg-L~--I----------------tR~~ft---~G~------~~~~Y---l~a 81 (264)
T PF06189_consen 36 LVEVVLLSRNSPDTGLRVFNSI---RHYG-LD--I----------------TRAAFT---GGE------SPYPY---LKA 81 (264)
T ss_pred ceEEEEEecCCHHHHHHHHHhH---HHhC-Cc--c----------------eeeeec---CCC------CHHHH---HHH
Confidence 4788999999887777776654 3331 11 1 123332 222 12223 345
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 275 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 275 lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
++++ +|..-+..|++.|..+|+....+....
T Consensus 82 f~v~----LFLSan~~DV~~Ai~~G~~Aa~v~~~~ 112 (264)
T PF06189_consen 82 FNVD----LFLSANEDDVQEAIDAGIPAATVLPSP 112 (264)
T ss_pred hCCc----eEeeCCHHHHHHHHHcCCCcEEeecCC
Confidence 5664 888899999999999999987775443
No 324
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=34.44 E-value=3.7e+02 Score=24.68 Aligned_cols=99 Identities=16% Similarity=0.157 Sum_probs=61.9
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC-CC-C
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD-VK-Q 260 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~ 260 (344)
.+.++|+..++.+|-+..+.-.+.+.++.+++.. +.. ....++.+ +.. .. .
T Consensus 5 ~~k~iL~~A~~~~yaV~AfNv~n~e~~~avi~AA---ee~-~sPvIlq~-----------------------~~~~~~~~ 57 (284)
T PRK12857 5 TVAELLKKAEKGGYAVGAFNCNNMEIVQAIVAAA---EAE-KSPVIIQA-----------------------SQGAIKYA 57 (284)
T ss_pred cHHHHHHHHHHcCCeEEEEEeCCHHHHHHHHHHH---HHh-CCCEEEEe-----------------------chhHhhhC
Confidence 3678899999999999888777777788877776 221 12344441 111 10 1
Q ss_pred CCC-CHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 261 KKP-DPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 261 ~KP-~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+.+ -..+...++++..++ =+++. |.+..++..|..+|+++|++.....
T Consensus 58 g~~~~~~~~~~~A~~~~VP--ValHLDH~~~~e~i~~ai~~GftSVM~DgS~l 108 (284)
T PRK12857 58 GIEYISAMVRTAAEKASVP--VALHLDHGTDFEQVMKCIRNGFTSVMIDGSKL 108 (284)
T ss_pred CHHHHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHcCCCeEEEeCCCC
Confidence 111 123345566666663 33444 4445688899999999999986654
No 325
>COG2896 MoaA Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism]
Probab=34.43 E-value=1e+02 Score=28.80 Aligned_cols=32 Identities=9% Similarity=0.140 Sum_probs=24.2
Q ss_pred hCCCccCccHHHHHHHHHHcCC-eEEEEeCCCh
Q 019226 175 SGTVEPRPGVLRLMDEAKAAGK-KVAVCSAATK 206 (344)
Q Consensus 175 ~~~~~~~pgv~~~l~~Lk~~g~-~v~ivTn~~~ 206 (344)
.+.+.+..++.++++.+++.++ .+.+-||+..
T Consensus 67 GGEPllR~dl~eIi~~l~~~~~~~islTTNG~~ 99 (322)
T COG2896 67 GGEPLLRKDLDEIIARLARLGIRDLSLTTNGVL 99 (322)
T ss_pred CCCchhhcCHHHHHHHHhhcccceEEEecchhh
Confidence 3556788999999999998765 4666668764
No 326
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=33.99 E-value=3.4e+02 Score=24.08 Aligned_cols=25 Identities=12% Similarity=0.127 Sum_probs=21.0
Q ss_pred ccHHHHHHHHHHcCCeEEEEeCCCh
Q 019226 182 PGVLRLMDEAKAAGKKVAVCSAATK 206 (344)
Q Consensus 182 pgv~~~l~~Lk~~g~~v~ivTn~~~ 206 (344)
++..++++.+++.|.+.+++-|...
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T 140 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKF 140 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCC
Confidence 5778899999999999988877654
No 327
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=33.86 E-value=62 Score=29.75 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=61.1
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP 263 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 263 (344)
+.++|+..++.||-+.-+.-.+...++.+++.. . .. ....++.+.++-+ ... ..+.
T Consensus 5 ~~~ll~~A~~~~yAV~AfN~~n~e~~~avi~AA-e--~~-~sPvIlq~~~~~~-------------------~~~-~~~~ 60 (287)
T PF01116_consen 5 MKELLKKAKEGGYAVPAFNVYNLETARAVIEAA-E--EL-NSPVILQISPSEV-------------------KYM-GLEY 60 (287)
T ss_dssp HHHHHHHHHHHT-BEEEEE-SSHHHHHHHHHHH-H--HT-TS-EEEEEEHHHH-------------------HHH-HHHH
T ss_pred HHHHHHHHHHCCCeEEEEeeCCHHHHHHHHHHH-H--Hh-CCCEEEEcchhhh-------------------hhh-hHHH
Confidence 578888899999999888888888888887776 2 11 1234444211000 000 0111
Q ss_pred CHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 264 DPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
-..+...++++.+++- +++. |.+..++..|..+|+++|++.....
T Consensus 61 ~~~~~~~~a~~~~vPV--alHLDH~~~~e~i~~ai~~GftSVM~DgS~l 107 (287)
T PF01116_consen 61 LAAMVKAAAEEASVPV--ALHLDHGKDFEDIKRAIDAGFTSVMIDGSAL 107 (287)
T ss_dssp HHHHHHHHHHHSTSEE--EEEEEEE-SHHHHHHHHHHTSSEEEEE-TTS
T ss_pred HHHHHHHHHHHcCCCE--EeecccCCCHHHHHHHHHhCcccccccCCcC
Confidence 2345566667777643 6666 5667799999999999999986654
No 328
>TIGR01290 nifB nitrogenase cofactor biosynthesis protein NifB. This model describes NifB, a protein required for the biosynthesis of the iron-molybdenum (or iron-vanadium) cofactor used by the nitrogen-fixing enzyme nitrogenase. Archaeal homologs lack the most C-terminal region and score between the trusted and noise cutoffs of this model.
Probab=33.68 E-value=1.3e+02 Score=29.58 Aligned_cols=28 Identities=7% Similarity=0.126 Sum_probs=21.8
Q ss_pred ccCcc-HHHHHHHHHHc--CCeEEEEeCCCh
Q 019226 179 EPRPG-VLRLMDEAKAA--GKKVAVCSAATK 206 (344)
Q Consensus 179 ~~~pg-v~~~l~~Lk~~--g~~v~ivTn~~~ 206 (344)
-.+++ +.+++..+++. |+++.+.||+..
T Consensus 91 Ll~~e~~~~~l~~~~~~~~~i~i~lsTNG~~ 121 (442)
T TIGR01290 91 LANIGKTFQTLELVARQLPDVKLCLSTNGLM 121 (442)
T ss_pred ccCccccHHHHHHHHHhcCCCeEEEECCCCC
Confidence 34443 67888888887 899999999963
No 329
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=33.53 E-value=1.7e+02 Score=27.25 Aligned_cols=31 Identities=13% Similarity=0.200 Sum_probs=24.7
Q ss_pred CCCccCccHHHHHHHHHHcCC--eEEEEeCCCh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGK--KVAVCSAATK 206 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~--~v~ivTn~~~ 206 (344)
+.+-++++..++++.+++.+. .+.+.||+..
T Consensus 70 GEPllr~dl~~li~~i~~~~~l~~i~itTNG~l 102 (329)
T PRK13361 70 GEPLVRRGCDQLVARLGKLPGLEELSLTTNGSR 102 (329)
T ss_pred cCCCccccHHHHHHHHHhCCCCceEEEEeChhH
Confidence 345677899999999998754 7889999865
No 330
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=33.51 E-value=3.8e+02 Score=24.59 Aligned_cols=101 Identities=17% Similarity=0.194 Sum_probs=63.1
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP 263 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 263 (344)
+.++|+..++.||-++.+.-.+.+.++.+++.. . .. ....++.+ ..+.. ...+ ...
T Consensus 6 ~k~il~~A~~~~yaV~AfN~~n~e~~~avi~AA-e--e~-~sPvIiq~-------~~~~~------------~~~g-~~~ 61 (284)
T PRK09195 6 TKQMLNNAQRGGYAVPAFNIHNLETMQVVVETA-A--EL-HSPVIIAG-------TPGTF------------SYAG-TEY 61 (284)
T ss_pred HHHHHHHHHHcCceEEEEEeCCHHHHHHHHHHH-H--Hh-CCCEEEEc-------ChhHH------------hhCC-HHH
Confidence 678999999999999888777788888888776 2 21 12344441 00000 0000 011
Q ss_pred CHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 264 DPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
-..+...++++..++ =+++. |.+...+..|.++|+++|++.....
T Consensus 62 ~~~~~~~~A~~~~VP--V~lHLDHg~~~e~i~~Ai~~GftSVM~DgS~l 108 (284)
T PRK09195 62 LLAIVSAAAKQYHHP--LALHLDHHEKFDDIAQKVRSGVRSVMIDGSHL 108 (284)
T ss_pred HHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHcCCCEEEeCCCCC
Confidence 234556666776663 34555 4456788899999999999976553
No 331
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.42 E-value=1.3e+02 Score=28.22 Aligned_cols=76 Identities=20% Similarity=0.245 Sum_probs=54.8
Q ss_pred HHHHHHHHHcCCCC-CcEEEEecCHh---hHHHHHHcCCeEEEEeCCCchhhhcc---ccccccCCccccCHHHHHHHHH
Q 019226 266 SIYVTAAKRLGISE-KDCLVVEDSVI---GLQAATRAGMACVITYTSSTAEQDFK---DAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 266 ~~~~~~~~~lgv~~-~~~i~vGDs~~---Di~~a~~aG~~~v~v~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
..=.+++++-++.+ ++++++|-++- -+..|++.|..-|.+..-....-+++ +++.+.++-...+++++.++++
T Consensus 156 sV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~ 235 (354)
T KOG0024|consen 156 SVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVE 235 (354)
T ss_pred hhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHH
Confidence 34457888888875 78888999985 55678888998888877666554443 3566666655557889999888
Q ss_pred Hhh
Q 019226 339 NVV 341 (344)
Q Consensus 339 ~~~ 341 (344)
+.+
T Consensus 236 ~~~ 238 (354)
T KOG0024|consen 236 KAL 238 (354)
T ss_pred hhc
Confidence 765
No 332
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=31.72 E-value=5.6e+02 Score=26.15 Aligned_cols=111 Identities=14% Similarity=0.244 Sum_probs=57.1
Q ss_pred ccCccHHHHHHHH---HHcCCeEEEEeCCChhhHHHHHHHhhccchhcc--cceeecccchhhhhccCCcCCcccccccc
Q 019226 179 EPRPGVLRLMDEA---KAAGKKVAVCSAATKSSVILCLENLIGMERFEG--LDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 179 ~~~pgv~~~l~~L---k~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
..++++.+.++.+ -+++-++.|++..+...+--..--...+..+.. ...++. .|.
T Consensus 50 ~~l~~m~~a~~ri~~ai~~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP---------------~R~----- 109 (575)
T PRK11070 50 QQLSGIEKAVELLYNALREGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVP---------------NRF----- 109 (575)
T ss_pred HHhhCHHHHHHHHHHHHHCCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeC---------------CCC-----
Confidence 4557777777766 445789999998765542221111112222211 112221 111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh---HHHHHHcCCeEEEEeCCCchhhhccc
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG---LQAATRAGMACVITYTSSTAEQDFKD 317 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~D---i~~a~~aG~~~v~v~~~~~~~~~l~~ 317 (344)
.+. .-.+...++.+.+. |. +=+|.|+-+..+ ++.|+..|+.+|.+... ...+.++.
T Consensus 110 -~eG---YGl~~~~i~~~~~~-~~--~LiItvD~Gi~~~e~i~~a~~~gidvIVtDHH-~~~~~~P~ 168 (575)
T PRK11070 110 -EDG---YGLSPEVVDQAHAR-GA--QLIVTVDNGISSHAGVAHAHALGIPVLVTDHH-LPGETLPA 168 (575)
T ss_pred -cCC---CCCCHHHHHHHHhc-CC--CEEEEEcCCcCCHHHHHHHHHCCCCEEEECCC-CCCCCCCC
Confidence 122 23455777776652 33 455666666555 44559999998765543 33334443
No 333
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=31.56 E-value=5e+02 Score=25.33 Aligned_cols=59 Identities=8% Similarity=0.098 Sum_probs=38.8
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccc--cccccCCccccCHHHHHHHHHHhh
Q 019226 283 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD--AIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 283 i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
++||=..+-.-.|..+|..++.+........-+.. ....+-+..+++.++|.+.++.+.
T Consensus 330 l~ig~RlHa~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~ 390 (426)
T PRK10017 330 LTVGTRLHSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTL 390 (426)
T ss_pred EEEEecchHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHH
Confidence 78999999899999999999998764433222211 122334556666666766666554
No 334
>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism]
Probab=31.52 E-value=3.6e+02 Score=23.61 Aligned_cols=49 Identities=29% Similarity=0.202 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE---ecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVV---EDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~v---GDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
--|-+..++.++.++|++.+++.++ |...+++.....-|-..++.....
T Consensus 99 iIPgiSS~q~a~ARlg~~~~~~~~islHgr~~~~l~~~~~~~~~~vil~~~~ 150 (210)
T COG2241 99 IIPGISSVQLAAARLGWPLQDTEVISLHGRPVELLRPLLENGRRLVILTPDD 150 (210)
T ss_pred EecChhHHHHHHHHhCCChHHeEEEEecCCCHHHHHHHHhCCceEEEeCCCC
Confidence 4678899999999999998887776 555667776765666666554433
No 335
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=31.04 E-value=3.6e+02 Score=23.52 Aligned_cols=84 Identities=14% Similarity=0.224 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCC-
Q 019226 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPD- 264 (344)
Q Consensus 186 ~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~- 264 (344)
++++.|.+.++ +.|+.+.+.+....+.+.+.. ..+..++.... -|.
T Consensus 5 ~~~~~l~~~~v-i~vir~~~~~~a~~~~~al~~-~Gi~~iEit~~-------------------------------~~~a 51 (213)
T PRK06552 5 EILTKLKANGV-VAVVRGESKEEALKISLAVIK-GGIKAIEVTYT-------------------------------NPFA 51 (213)
T ss_pred HHHHHHHHCCE-EEEEECCCHHHHHHHHHHHHH-CCCCEEEEECC-------------------------------CccH
Confidence 34566766654 667777777777777776621 11111222222 122
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecC--H--hhHHHHHHcCCeEEE
Q 019226 265 PSIYVTAAKRLGISEKDCLVVEDS--V--IGLQAATRAGMACVI 304 (344)
Q Consensus 265 ~~~~~~~~~~lgv~~~~~i~vGDs--~--~Di~~a~~aG~~~v~ 304 (344)
.+.++.+.++++-.|+ +.||=+ . .+++.|..+|..+++
T Consensus 52 ~~~i~~l~~~~~~~p~--~~vGaGTV~~~~~~~~a~~aGA~Fiv 93 (213)
T PRK06552 52 SEVIKELVELYKDDPE--VLIGAGTVLDAVTARLAILAGAQFIV 93 (213)
T ss_pred HHHHHHHHHHcCCCCC--eEEeeeeCCCHHHHHHHHHcCCCEEE
Confidence 3455566555543333 445443 2 478888888888765
No 336
>PF02091 tRNA-synt_2e: Glycyl-tRNA synthetase alpha subunit; InterPro: IPR002310 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. In eubacteria, glycyl-tRNA synthetase (6.1.1.14 from EC) is an alpha2/beta2 tetramer composed of 2 different subunits [, , ]. In some eubacteria, in archaea and eukaryota, glycyl-tRNA synthetase is an alpha2 dimer (see IPR002315 from INTERPRO). It belongs to class IIc and is one of the most complex synthetases. What is most interesting is the lack of similarity between the two types: divergence at the sequence level is so great that it is impossible to infer descent from common genes. The alpha and beta subunits (see IPR002311 from INTERPRO) also lack significant sequence similarity. However, they are translated from a single mRNA [], and a single chain glycyl-tRNA synthetase from Chlamydia trachomatis has been found to have significant similarity with both domains, suggesting divergence from a single polypeptide chain []. This entry represents the alpha subunit of glycyl-tRNA synthetase.; GO: 0000166 nucleotide binding, 0004820 glycine-tRNA ligase activity, 0005524 ATP binding, 0006426 glycyl-tRNA aminoacylation, 0005737 cytoplasm; PDB: 3RF1_A 3UFG_B 3RGL_B 1J5W_B.
Probab=30.60 E-value=13 Score=33.32 Aligned_cols=46 Identities=30% Similarity=0.359 Sum_probs=31.2
Q ss_pred CCCCH----HHHHHHHHHcCCCC--CcEEEEecCH-hhHHHHHHcCCeEEEEeC
Q 019226 261 KKPDP----SIYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYT 307 (344)
Q Consensus 261 ~KP~~----~~~~~~~~~lgv~~--~~~i~vGDs~-~Di~~a~~aG~~~v~v~~ 307 (344)
-||.| +.|..-++.+|+++ +++-||.|+. +--.+|...||. ||++.
T Consensus 79 lKPsP~niq~lYL~SL~~lGId~~~hDIRFVEDnWEsPtLGAwGlGWE-VWldG 131 (284)
T PF02091_consen 79 LKPSPDNIQELYLESLEALGIDPKEHDIRFVEDNWESPTLGAWGLGWE-VWLDG 131 (284)
T ss_dssp EES--TTHHHHHHHHHHHCT--CCCS-EEEEEE-EEETTTTEEEEEEE-EEETT
T ss_pred EcCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccccE-EEECC
Confidence 36665 78889999999975 6899999998 577788888887 45543
No 337
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=30.58 E-value=37 Score=32.62 Aligned_cols=20 Identities=15% Similarity=0.212 Sum_probs=17.0
Q ss_pred CCCCccEEEEecCccccccc
Q 019226 63 SSQSLQALIFDCDGVIIESE 82 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~ 82 (344)
.+..+.+|-||||+||....
T Consensus 23 ~l~~i~~~GfdmDyTL~~Y~ 42 (424)
T KOG2469|consen 23 NLENIGIVGFDMDYTLARYN 42 (424)
T ss_pred hhhcCcEEeeccccchhhhc
Confidence 35789999999999998765
No 338
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=30.51 E-value=60 Score=31.92 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=20.4
Q ss_pred CCCccEEEEecCccccccch-----hHHHHHHHHHH-hcCCCCC
Q 019226 64 SQSLQALIFDCDGVIIESEH-----LHRQAYNDAFS-HFNVRCD 101 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~-----~~~~a~~~~~~-~~g~~~~ 101 (344)
+..+++|-||+|-||+.... ..++...+.+- +.|.+..
T Consensus 9 l~~i~~iGFDmDyTLa~Y~~~~~~~L~y~~~~~~LV~~~gYP~~ 52 (448)
T PF05761_consen 9 LKDIDVIGFDMDYTLARYKSPELEELIYELARERLVEEKGYPEE 52 (448)
T ss_dssp CCC--EEEE-TBTTTBEE-CCHHHHHHHHHHHHHHHHHTT--GG
T ss_pred cccCCEEEECcccchhhcCHHHHHHHHHHHHHHHHHhccCCCHH
Confidence 57899999999999987643 33344333333 3676643
No 339
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=30.48 E-value=53 Score=28.73 Aligned_cols=30 Identities=17% Similarity=0.195 Sum_probs=24.8
Q ss_pred CccCcc-HHHHHHHHHHcCCeEEEEeCCChh
Q 019226 178 VEPRPG-VLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 178 ~~~~pg-v~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
+.+.++ +.++++.+|+.|+.+++.||+...
T Consensus 49 Pllq~~fl~~l~~~~k~~gi~~~leTnG~~~ 79 (213)
T PRK10076 49 VLMQAEFATRFLQRLRLWGVSCAIETAGDAP 79 (213)
T ss_pred HHcCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 345666 689999999999999999999653
No 340
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=30.44 E-value=48 Score=28.24 Aligned_cols=74 Identities=18% Similarity=0.148 Sum_probs=28.8
Q ss_pred HHHHHHHHcCCeEEEEeCCChhhHHHHHHHhh--ccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC
Q 019226 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLI--GMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP 263 (344)
Q Consensus 186 ~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 263 (344)
.+|..++++|++++++.+.-............ .-.-+..||.+.. -+
T Consensus 109 nll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~a------------------------qs------- 157 (186)
T PF04413_consen 109 NLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILA------------------------QS------- 157 (186)
T ss_dssp HHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEE------------------------SS-------
T ss_pred HHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEE------------------------CC-------
Confidence 67889999999999998754432211111110 1112233566655 11
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSVIGL 292 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~~Di 292 (344)
+.-..-+.++|++++++.+.||--.|.
T Consensus 158 --~~da~r~~~lG~~~~~v~v~GnlKfd~ 184 (186)
T PF04413_consen 158 --EADAERFRKLGAPPERVHVTGNLKFDQ 184 (186)
T ss_dssp --HHHHHHHHTTT-S--SEEE---GGG--
T ss_pred --HHHHHHHHHcCCCcceEEEeCcchhcc
Confidence 223455678999999999999987765
No 341
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.33 E-value=3.4e+02 Score=26.38 Aligned_cols=42 Identities=21% Similarity=0.348 Sum_probs=30.9
Q ss_pred CCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEecCHhhHHHHHH
Q 019226 256 DDVKQKKPDPSIYVTAAKRL-GISEKDCLVVEDSVIGLQAATR 297 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~l-gv~~~~~i~vGDs~~Di~~a~~ 297 (344)
|.-++.|-+...|+...+-- -+.|+++++|-|....-.+...
T Consensus 190 DTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Q 232 (483)
T KOG0780|consen 190 DTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQ 232 (483)
T ss_pred eCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHH
Confidence 55566777888888877654 4679999999998865555443
No 342
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=30.07 E-value=2.3e+02 Score=23.37 Aligned_cols=25 Identities=12% Similarity=0.036 Sum_probs=19.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEe
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVE 286 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vG 286 (344)
.-|+.+....+.+ .|++++++...|
T Consensus 142 ~Vase~~~~~l~~-~Gi~~~~I~vtG 166 (169)
T PF06925_consen 142 FVASEEVKEELIE-RGIPPERIHVTG 166 (169)
T ss_pred EECCHHHHHHHHH-cCCChhHEEEeC
Confidence 4566677777765 899999988776
No 343
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=29.99 E-value=93 Score=28.60 Aligned_cols=53 Identities=26% Similarity=0.310 Sum_probs=41.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH------cCCeEEEEeCCCch
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATR------AGMACVITYTSSTA 311 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~------aG~~~v~v~~~~~~ 311 (344)
...-|+++.|...+.++||..+..|+|=|..+...+++. +|..-|.|..|...
T Consensus 69 ~~~lp~~e~fa~~~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdGG~~ 127 (285)
T COG2897 69 PHMLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGGLP 127 (285)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecCCHH
Confidence 457789999999999999998888877665666666654 69988888776653
No 344
>TIGR01521 FruBisAldo_II_B fructose-bisphosphate aldolase, class II, Calvin cycle subtype. Members of this family are class II examples of the enzyme fructose-bisphosphate aldolase, an enzyme both of glycolysis and (in the opposite direction) of the Calvin cycle of CO2 fixation. A deep split separates the tightly conserved yeast/E. coli/Mycobacterium subtype (all species lacking the Calvin cycle) represented by model TIGR01520 from a broader group of aldolases that includes both tagatose- and fructose-bisphosphate aldolases. This model represents a distinct, elongated, very well conserved subtype within the latter group. Most species with this aldolase subtype have the Calvin cycle.
Probab=29.91 E-value=4.9e+02 Score=24.71 Aligned_cols=97 Identities=15% Similarity=0.127 Sum_probs=60.1
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP 263 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 263 (344)
+.++|+..++.||-|..+.-.+.+.++.+++.. . .. ....++.+ +......-+
T Consensus 4 ~k~iL~~A~~~~yAV~AfN~~n~e~~~aii~AA-E--e~-~sPvIlq~-----------------------s~~~~~~~g 56 (347)
T TIGR01521 4 MRQLLDHAAEFGYGVPAFNVNNMEQMRAIMEAA-D--KT-DSPVILQA-----------------------SRGARSYAG 56 (347)
T ss_pred HHHHHHHHHHcCceEEEEeeCCHHHHHHHHHHH-H--Hh-CCCEEEEC-----------------------CcchhhhCC
Confidence 678899999999999988888888888888776 2 11 12344441 111111111
Q ss_pred ---CHHHHHHHHHHcC-CCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 264 ---DPSIYVTAAKRLG-ISEKDCLVV--EDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 264 ---~~~~~~~~~~~lg-v~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
-..+...++++.. + -=+++. |.+..++..|..+|+++||+....
T Consensus 57 ~~~~~~~~~~~ae~~~~V--PValHLDHg~~~e~i~~Ai~~GFtSVMiDgS~ 106 (347)
T TIGR01521 57 APFLRHLILAAIEEYPHI--PVVMHQDHGNSPATCQRAIQLGFTSVMMDGSL 106 (347)
T ss_pred HHHHHHHHHHHHHhCCCC--cEEEECCCCCCHHHHHHHHHcCCCEEeecCcC
Confidence 1223333444442 3 234555 455678889999999999998664
No 345
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=29.86 E-value=74 Score=24.58 Aligned_cols=28 Identities=21% Similarity=0.213 Sum_probs=23.8
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
-.+++.+.++.++++|.+++.+|+....
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s 85 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGS 85 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 4457889999999999999999998653
No 346
>PRK09196 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=29.64 E-value=4.9e+02 Score=24.67 Aligned_cols=99 Identities=16% Similarity=0.136 Sum_probs=60.6
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
.+.++|+..++.||-|..+.-.+.+.++.+++.. . .. ....++.+ +......-
T Consensus 5 ~~k~lL~~A~~~~yAVgAfN~~n~e~~~avi~AA-e--e~-~sPvIiq~-----------------------s~~~~~~~ 57 (347)
T PRK09196 5 SLRQLLDHAAEHGYGVPAFNVNNLEQVQAIMEAA-D--ET-DSPVILQA-----------------------SAGARKYA 57 (347)
T ss_pred cHHHHHHHHHHcCceEEEeeeCCHHHHHHHHHHH-H--Hh-CCCEEEEC-----------------------CccHhhhC
Confidence 3678999999999999988888888888888776 2 21 12444441 11111111
Q ss_pred C---CHHHHHHHHHHcC-CCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 263 P---DPSIYVTAAKRLG-ISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 263 P---~~~~~~~~~~~lg-v~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+ -..+...++++.. + .=+++. |.+..++..|..+|+++|++.....
T Consensus 58 g~~~~~~~~~~~a~~~~~V--PValHLDHg~~~e~i~~ai~~GftSVMiDgS~l 109 (347)
T PRK09196 58 GEPFLRHLILAAVEEYPHI--PVVMHQDHGNSPATCQRAIQLGFTSVMMDGSLK 109 (347)
T ss_pred CHHHHHHHHHHHHHhCCCC--cEEEECCCCCCHHHHHHHHHcCCCEEEecCCCC
Confidence 1 1223333444332 3 234455 4455688889999999999986643
No 347
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=29.46 E-value=2.5e+02 Score=27.41 Aligned_cols=56 Identities=20% Similarity=0.284 Sum_probs=33.8
Q ss_pred cCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCc
Q 019226 74 CDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSS 141 (344)
Q Consensus 74 ~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 141 (344)
+|+++...+......+.+.++++|++..-. ......+...+......+..+|++..
T Consensus 69 iD~Vv~g~E~~l~~glad~~~~~Gip~~Gp------------~~~aa~le~dK~~~K~~l~~~gIpt~ 124 (426)
T PRK13789 69 FDLIVVGPEDPLVAGFADWAAELGIPCFGP------------DSYCAQVEGSKHFAKSLMKEAKIPTA 124 (426)
T ss_pred CCEEEECCchHHHHHHHHHHHHcCCCcCCC------------HHHHHHHHcCHHHHHHHHHHcCCCCC
Confidence 455555555555566777788888864210 01122344566667778888888754
No 348
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=29.34 E-value=2.8e+02 Score=25.90 Aligned_cols=32 Identities=19% Similarity=0.033 Sum_probs=21.2
Q ss_pred CCCcEEEEecCHh---hHHHHHHcCCeEEEEeCCC
Q 019226 278 SEKDCLVVEDSVI---GLQAATRAGMACVITYTSS 309 (344)
Q Consensus 278 ~~~~~i~vGDs~~---Di~~a~~aG~~~v~v~~~~ 309 (344)
.|+=++..||... -..+|...|+..+.+..+.
T Consensus 86 ~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~ 120 (365)
T TIGR00236 86 KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL 120 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC
Confidence 3555556688764 4456677899988876543
No 349
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=29.23 E-value=39 Score=24.65 Aligned_cols=18 Identities=28% Similarity=0.632 Sum_probs=14.8
Q ss_pred ccEEEEecCccccccchh
Q 019226 67 LQALIFDCDGVIIESEHL 84 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~ 84 (344)
.-.++++-|||.+|++..
T Consensus 39 ~~~lvLeeDGT~Vd~Eey 56 (81)
T cd06537 39 VLTLVLEEDGTAVDSEDF 56 (81)
T ss_pred ceEEEEecCCCEEccHHH
Confidence 468999999999987644
No 350
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=29.11 E-value=39 Score=24.46 Aligned_cols=18 Identities=28% Similarity=0.733 Sum_probs=14.8
Q ss_pred ccEEEEecCccccccchh
Q 019226 67 LQALIFDCDGVIIESEHL 84 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~ 84 (344)
.-.++++-|||.+|++..
T Consensus 40 ~~~lvL~eDGT~Vd~Eey 57 (78)
T cd06539 40 LVTLVLEEDGTVVDTEEF 57 (78)
T ss_pred CcEEEEeCCCCEEccHHH
Confidence 468899999999987644
No 351
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated
Probab=28.89 E-value=4.9e+02 Score=24.90 Aligned_cols=43 Identities=19% Similarity=0.165 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCH--hhHHHHHHcCCeEEEEeCCC
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVVEDSV--IGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~vGDs~--~Di~~a~~aG~~~v~v~~~~ 309 (344)
.++..+...+++.+++ + +.||-. .+...+..+|+..|++..+.
T Consensus 174 ~~~~~i~~~ik~~~ip---V-IaG~V~t~e~A~~l~~aGAD~V~VG~G~ 218 (368)
T PRK08649 174 GEPLNLKEFIYELDVP---V-IVGGCVTYTTALHLMRTGAAGVLVGIGP 218 (368)
T ss_pred CCHHHHHHHHHHCCCC---E-EEeCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 3677788888887654 3 336644 47888888999999886443
No 352
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=28.83 E-value=1.5e+02 Score=30.64 Aligned_cols=106 Identities=18% Similarity=0.160 Sum_probs=65.7
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch--hcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER--FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
|..+..+.+++...-|+.|-.+|+......++.-+++ ++.- |+. ...... -.|+.. | +.+
T Consensus 493 prhdsa~tirral~lGv~VkmitgdqlaI~keTgrrl-gmgtnmyps-s~llG~------~~~~~~-~---------~~~ 554 (942)
T KOG0205|consen 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL-GMGTNMYPS-SALLGL------GKDGSM-P---------GSP 554 (942)
T ss_pred CccchHHHHHHHHhccceeeeecchHHHHHHhhhhhh-ccccCcCCc-hhhccC------CCCCCC-C---------CCc
Confidence 4667888899999999999999998888887777776 4332 210 001100 000000 0 000
Q ss_pred --------CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 --------VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 --------~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
-+...-.|+--..+.++|.-...-|-|-||+.||..+.+.|.....
T Consensus 555 v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigia 608 (942)
T KOG0205|consen 555 VDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIA 608 (942)
T ss_pred HHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhccccccee
Confidence 0111223344455666676667889999999999999999977643
No 353
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=28.77 E-value=4.4e+02 Score=23.81 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=24.1
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCCh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATK 206 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~ 206 (344)
+.+...+++.++.+.+++.|-+|.+.++...
T Consensus 109 d~~~~V~d~~ea~~~~~~~~~rVflt~G~~~ 139 (257)
T COG2099 109 DNWIEVADIEEAAEAAKQLGRRVFLTTGRQN 139 (257)
T ss_pred CceEEecCHHHHHHHHhccCCcEEEecCccc
Confidence 3456778899999999998877777777655
No 354
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=28.64 E-value=2e+02 Score=27.56 Aligned_cols=127 Identities=16% Similarity=0.155 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCC----ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc-----cccee
Q 019226 158 IDLIQDWKTERYQQIIKSGTV----EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE-----GLDCF 228 (344)
Q Consensus 158 ~~~l~~~~~~~~~~~~~~~~~----~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~-----~~d~~ 228 (344)
.+++.++..+.+.-.+....+ .+.||+...++.+.+.|-.|+|.|-.-..+...+- .. +-.... .-+.+
T Consensus 66 ~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~-~n-~R~~i~~pL~~~~~~y 143 (388)
T COG1168 66 YAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIK-LN-GRKVIENPLVEDDGRY 143 (388)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHh-hc-CcEEEeccccccCCcE
Confidence 344555555554444333322 45567777788888889999988855444332221 11 100000 00000
Q ss_pred ecccchhhhhccCCcC--Ccccccc-ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHH
Q 019226 229 LADCQSYVLMTNGTLM--PNRVCVC-AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQA 294 (344)
Q Consensus 229 ~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~ 294 (344)
.. |+...+.--.. ...+++| ||-.....-.|..-+.+..+|++.|+ .+|.|-.+ |+..
T Consensus 144 ~i---D~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v-----~VISDEIHaDlv~ 205 (388)
T COG1168 144 EI---DFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGV-----RVISDEIHADLVL 205 (388)
T ss_pred Ee---cHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCC-----EEEeecccccccc
Confidence 00 11111100001 2356777 45444444455566777888888887 56666553 5543
No 355
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=28.61 E-value=3.2e+02 Score=25.18 Aligned_cols=26 Identities=27% Similarity=0.410 Sum_probs=22.2
Q ss_pred CccHHHHHHHHHHcCCeEEEEeCCCh
Q 019226 181 RPGVLRLMDEAKAAGKKVAVCSAATK 206 (344)
Q Consensus 181 ~pgv~~~l~~Lk~~g~~v~ivTn~~~ 206 (344)
.||+..+-+.|+..|.++.++|+...
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~ 87 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERC 87 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHH
Confidence 46889999999999999999997653
No 356
>PLN02591 tryptophan synthase
Probab=28.50 E-value=4.4e+02 Score=23.68 Aligned_cols=29 Identities=14% Similarity=0.028 Sum_probs=21.5
Q ss_pred CcEEEEecCH---hhHHHHHHcCCeEEEEeCC
Q 019226 280 KDCLVVEDSV---IGLQAATRAGMACVITYTS 308 (344)
Q Consensus 280 ~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~ 308 (344)
+--+++|=+. .|++.+...|...|.|.+.
T Consensus 189 ~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGSa 220 (250)
T PLN02591 189 DKPVAVGFGISKPEHAKQIAGWGADGVIVGSA 220 (250)
T ss_pred CCceEEeCCCCCHHHHHHHHhcCCCEEEECHH
Confidence 4446666665 4999999999999888554
No 357
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.
Probab=28.39 E-value=4e+02 Score=24.65 Aligned_cols=42 Identities=17% Similarity=0.156 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCH--hhHHHHHHcCCeEEEEeC
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVVEDSV--IGLQAATRAGMACVITYT 307 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~vGDs~--~Di~~a~~aG~~~v~v~~ 307 (344)
++...+..+.+..+++ ++.-|+-. .|+..+...|...|++.+
T Consensus 148 ~~~~ll~~v~~~~~iP---viaaGGI~~~~~~~~al~~GA~gV~iGt 191 (307)
T TIGR03151 148 TTMALVPQVVDAVSIP---VIAAGGIADGRGMAAAFALGAEAVQMGT 191 (307)
T ss_pred cHHHHHHHHHHHhCCC---EEEECCCCCHHHHHHHHHcCCCEeecch
Confidence 4566677777766653 66666654 589999999999998855
No 358
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=28.14 E-value=4.7e+02 Score=23.98 Aligned_cols=99 Identities=18% Similarity=0.185 Sum_probs=60.9
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
.+.++|+..++.||-+..+.-.+.+.++.+++.. +.. .-..++.+ +......-
T Consensus 5 ~~k~ll~~A~~~~yaV~AfN~~n~e~~~avi~AA---e~~-~sPvIl~~-----------------------~~~~~~~~ 57 (283)
T PRK07998 5 NGRILLDRIQEKHVLAGAFNTTNLETTISILNAI---ERS-GLPNFIQI-----------------------APTNAQLS 57 (283)
T ss_pred cHHHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHH---HHh-CCCEEEEC-----------------------cHhHHhhC
Confidence 4678999999999999888777777788777776 221 12334431 11110011
Q ss_pred C---CHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 263 P---DPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 263 P---~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+ -..+...++++.+++ =+++. |.+..++..|-++|+++|++.....
T Consensus 58 g~~~~~~~~~~~A~~~~vP--V~lHLDH~~~~e~i~~Ai~~GftSVM~DgS~l 108 (283)
T PRK07998 58 GYDYIYEIVKRHADKMDVP--VSLHLDHGKTFEDVKQAVRAGFTSVMIDGAAL 108 (283)
T ss_pred CHHHHHHHHHHHHHHCCCC--EEEECcCCCCHHHHHHHHHcCCCEEEEeCCCC
Confidence 1 123555666777663 33444 3445678888889999999865443
No 359
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=28.14 E-value=70 Score=24.80 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=24.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
.-.+++.+.++.+|++|.+++.+|+....
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (128)
T cd05014 58 GETDELLNLLPHLKRRGAPIIAITGNPNS 86 (128)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 35578999999999999999999997664
No 360
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=28.01 E-value=5e+02 Score=26.20 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=24.9
Q ss_pred HHcCCC-CCcEEEEecCH-hhHHHHHHc----CCeEEEEeC
Q 019226 273 KRLGIS-EKDCLVVEDSV-IGLQAATRA----GMACVITYT 307 (344)
Q Consensus 273 ~~lgv~-~~~~i~vGDs~-~Di~~a~~a----G~~~v~v~~ 307 (344)
.+.+.+ .+-++.||-+. .|+..+.++ |+..|.|++
T Consensus 263 ~~~~~~r~D~IIAIGGGsv~D~AKfvA~~y~rGi~~i~vPT 303 (542)
T PRK14021 263 GNEGFTRSDAIVGLGGGAATDLAGFVAATWMRGIRYVNCPT 303 (542)
T ss_pred HhcCCCCCcEEEEEcChHHHHHHHHHHHHHHcCCCEEEeCC
Confidence 344554 34455688876 599888874 999998877
No 361
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=27.84 E-value=43 Score=24.03 Aligned_cols=18 Identities=28% Similarity=0.578 Sum_probs=14.7
Q ss_pred ccEEEEecCccccccchh
Q 019226 67 LQALIFDCDGVIIESEHL 84 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~ 84 (344)
.-.++++-|||.++++..
T Consensus 38 ~~~l~L~eDGT~VddEey 55 (74)
T smart00266 38 PVTLVLEEDGTIVDDEEY 55 (74)
T ss_pred CcEEEEecCCcEEccHHH
Confidence 457889999999987644
No 362
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=27.79 E-value=86 Score=27.74 Aligned_cols=37 Identities=27% Similarity=0.466 Sum_probs=31.0
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~ 220 (344)
.+.+.+.+|++.|++|+.+|......+...-+.+ ++.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l-~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSL-GVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhc-CCC
Confidence 4678999999999999999999988777777776 554
No 363
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=27.78 E-value=2.3e+02 Score=26.79 Aligned_cols=26 Identities=12% Similarity=0.153 Sum_probs=18.5
Q ss_pred HHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 019226 268 YVTAAKRLGISEKDCLVVEDSVIGLQAA 295 (344)
Q Consensus 268 ~~~~~~~lgv~~~~~i~vGDs~~Di~~a 295 (344)
.+.++++++ ++.|++|.|+..|=...
T Consensus 90 ld~vl~~~~--~~~~i~VsDGaeDE~vl 115 (344)
T PF04123_consen 90 LDEVLSKFD--PDSAIVVSDGAEDERVL 115 (344)
T ss_pred HHHHHHhCC--CCEEEEEecChhhhhhh
Confidence 455555554 57999999999875544
No 364
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=27.70 E-value=5.7e+02 Score=24.78 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=25.2
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEE-eCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVC-SAAT 205 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~iv-Tn~~ 205 (344)
..-.+|.+.++++.+++.|+++++. ||+.
T Consensus 84 epl~~~~l~eLl~~lk~~gi~taI~~TnG~ 113 (404)
T TIGR03278 84 DVSCYPELEELTKGLSDLGLPIHLGYTSGK 113 (404)
T ss_pred ccccCHHHHHHHHHHHhCCCCEEEeCCCCc
Confidence 3567899999999999999999995 9965
No 365
>smart00540 LEM in nuclear membrane-associated proteins. LEM, domain in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin.
Probab=27.60 E-value=64 Score=20.59 Aligned_cols=32 Identities=22% Similarity=0.102 Sum_probs=26.5
Q ss_pred HHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++.+.|++.|++.+=+|...+...++.+..+
T Consensus 9 ~eL~~~L~~~G~~~gPIt~sTR~vy~kkL~~~ 40 (44)
T smart00540 9 AELRAELKQYGLPPGPITDTTRKLYEKKLRKL 40 (44)
T ss_pred HHHHHHHHHcCCCCCCcCcchHHHHHHHHHHH
Confidence 47788999999999999999888777777654
No 366
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=27.54 E-value=2.4e+02 Score=29.58 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=28.6
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE 214 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~ 214 (344)
++-+++...|+.||.+|++++.+|+..-+.+.-+.+
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAk 693 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAK 693 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeeh
Confidence 577889999999999999999999976654443333
No 367
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=27.24 E-value=4.8e+02 Score=23.75 Aligned_cols=58 Identities=12% Similarity=-0.021 Sum_probs=36.2
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccc----cccccCCccccCHHHHHHHHHHh
Q 019226 283 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD----AIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 283 i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~----~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
++||..-.-+.+|.+.|..+|.+..+.......+. ....-+++..++++++.+.+.++
T Consensus 257 l~I~~DSgp~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~~~~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 257 AVVGVDTGLTHLAAALDKPTVTLYGATDPGRTGGYGKPNVALLGESGANPTPDEVLAALEEL 318 (319)
T ss_pred EEEeCCChHHHHHHHcCCCEEEEECCCCHhhcccCCCCceEEccCccCCCCHHHHHHHHHhh
Confidence 45554444588899999999988765443221111 11223457888888888877654
No 368
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=27.20 E-value=1.3e+02 Score=25.23 Aligned_cols=30 Identities=10% Similarity=0.232 Sum_probs=25.7
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCCh
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATK 206 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~ 206 (344)
...+++++.++++.+++.|+.+.+.||+..
T Consensus 72 EPll~~~l~~li~~~~~~g~~v~i~TNg~~ 101 (191)
T TIGR02495 72 EPTLQAGLPDFLRKVRELGFEVKLDTNGSN 101 (191)
T ss_pred cccCcHhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 345667899999999999999999999974
No 369
>PRK14908 glycyl-tRNA synthetase; Provisional
Probab=27.00 E-value=58 Score=35.26 Aligned_cols=46 Identities=28% Similarity=0.289 Sum_probs=37.7
Q ss_pred CCCCH----HHHHHHHHHcCCCC--CcEEEEecCH-hhHHHHHHcCCeEEEEeC
Q 019226 261 KKPDP----SIYVTAAKRLGISE--KDCLVVEDSV-IGLQAATRAGMACVITYT 307 (344)
Q Consensus 261 ~KP~~----~~~~~~~~~lgv~~--~~~i~vGDs~-~Di~~a~~aG~~~v~v~~ 307 (344)
-||.| +.|..-++.+|+++ +++-||.|++ +--.+|...||. ||++.
T Consensus 85 ~kp~p~~~q~~yl~sl~~~gi~~~~~dirfved~we~p~lga~glgwe-vw~~g 137 (1000)
T PRK14908 85 LKPVPGNPQELYLESLKAIGIDLRDHDIRFVHDDWENPTIGAWGLGWE-VWLDG 137 (1000)
T ss_pred ECCCCccHHHHHHHHHHHcCCCccccceeEeecCCCCCcccccccccE-EEECC
Confidence 46665 67888999999975 7899999998 588899999998 46654
No 370
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=26.89 E-value=5.4e+02 Score=24.26 Aligned_cols=14 Identities=21% Similarity=0.304 Sum_probs=12.1
Q ss_pred EEEEecCccccccc
Q 019226 69 ALIFDCDGVIIESE 82 (344)
Q Consensus 69 ~viFD~DGTL~d~~ 82 (344)
.+|-|+|.|+..+.
T Consensus 163 giISDiDDTV~~T~ 176 (373)
T COG4850 163 GIISDIDDTVKVTG 176 (373)
T ss_pred eeeeccccceEecc
Confidence 68889999999875
No 371
>PRK08005 epimerase; Validated
Probab=26.75 E-value=4.3e+02 Score=23.04 Aligned_cols=95 Identities=7% Similarity=0.070 Sum_probs=54.4
Q ss_pred ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceee--cccchhhhhccCCcCCccccccccCCCCCC
Q 019226 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFL--ADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 182 pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
+...++++.+|+.|.+.+++=|-... ++.+...+. ..|.+. ++.| |..
T Consensus 93 ~~~~~~l~~Ik~~G~k~GlAlnP~Tp-~~~i~~~l~------~vD~VlvMsV~P---------------------Gf~-- 142 (210)
T PRK08005 93 QNPSEILADIRAIGAKAGLALNPATP-LLPYRYLAL------QLDALMIMTSEP---------------------DGR-- 142 (210)
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCC-HHHHHHHHH------hcCEEEEEEecC---------------------CCc--
Confidence 45778999999999999999887654 332222221 124332 2111 111
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHh--hHHHHHHcCCeEEEEe
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVI--GLQAATRAGMACVITY 306 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~--Di~~a~~aG~~~v~v~ 306 (344)
-.|=-+..++++.+.-..-++.-+-|+-+.+ .+....++|...+.+.
T Consensus 143 GQ~f~~~~~~KI~~l~~~~~~~~I~VDGGI~~~~i~~l~~aGad~~V~G 191 (210)
T PRK08005 143 GQQFIAAMCEKVSQSREHFPAAECWADGGITLRAARLLAAAGAQHLVIG 191 (210)
T ss_pred cceecHHHHHHHHHHHHhcccCCEEEECCCCHHHHHHHHHCCCCEEEEC
Confidence 1222356666665433332222277766654 7778899999976553
No 372
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=26.60 E-value=35 Score=30.90 Aligned_cols=95 Identities=17% Similarity=0.189 Sum_probs=56.2
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+.-.|++.++|....+. +.+++.|.+.......++..+..-..+ +...+- +..+.
T Consensus 130 V~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~LD~~~~i--~~~Rly----------------------R~~C~ 184 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDILDPDRKI--ISHRLY----------------------RDSCT 184 (262)
T ss_pred EEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHccCCCCe--eeeeec----------------------ccceE
Confidence 45678888888887776 778888888877777777766210111 111110 00010
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
.. .-.|-+-+..+|-+.++++.|+|++.-..+=-..|+..
T Consensus 185 ~~-----~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI 224 (262)
T KOG1605|consen 185 LK-----DGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPI 224 (262)
T ss_pred eE-----CCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcc
Confidence 00 00111122566778899999999998776666667664
No 373
>COG0602 NrdG Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=25.89 E-value=40 Score=29.49 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=26.2
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
.+...++..++++.|++.|+++.+=||++..
T Consensus 81 EP~~~~~l~~Ll~~l~~~g~~~~lETngti~ 111 (212)
T COG0602 81 EPLLQPNLLELLELLKRLGFRIALETNGTIP 111 (212)
T ss_pred cCCCcccHHHHHHHHHhCCceEEecCCCCcc
Confidence 3334579999999999999999999998765
No 374
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=25.40 E-value=3.6e+02 Score=21.90 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC---CeEEEEeCCCchhhhcccc
Q 019226 266 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG---MACVITYTSSTAEQDFKDA 318 (344)
Q Consensus 266 ~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG---~~~v~v~~~~~~~~~l~~~ 318 (344)
......++-.|++.+++.+..|...-..-....+ -.+++|.++.++...+..+
T Consensus 57 gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~A 112 (152)
T COG4087 57 GSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREA 112 (152)
T ss_pred hHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhc
Confidence 4577888999999888887777765444444444 7789999888876555443
No 375
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=25.31 E-value=99 Score=23.99 Aligned_cols=28 Identities=18% Similarity=0.076 Sum_probs=24.0
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
-.+++.+.++.++++|.++..+|+....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDS 86 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 4567889999999999999999997664
No 376
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=25.29 E-value=5e+02 Score=24.24 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=29.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecC----HhhHHHHHHcCCeEEEEeC
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACVITYT 307 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs----~~Di~~a~~aG~~~v~v~~ 307 (344)
+.+.|.-..+..+.+...-. ++=+|.|+ ..|+..|..+|...|++.+
T Consensus 177 g~g~p~~~~i~~v~~~~~~~--~vpVIA~GGI~~~~di~kAla~GA~~VmiGt 227 (325)
T cd00381 177 GVGVPQATAVADVAAAARDY--GVPVIADGGIRTSGDIVKALAAGADAVMLGS 227 (325)
T ss_pred CCCCCHHHHHHHHHHHHhhc--CCcEEecCCCCCHHHHHHHHHcCCCEEEecc
Confidence 34567666666655543211 12244544 3599999999999999844
No 377
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=24.88 E-value=85 Score=30.36 Aligned_cols=46 Identities=15% Similarity=0.147 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHH----HHHcCCeEEEEeCCC
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQA----ATRAGMACVITYTSS 309 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~----a~~aG~~~v~v~~~~ 309 (344)
..+-...++++.|--.+-++||||++.|+-. +...|.....+..+.
T Consensus 207 E~~~Va~~Akk~gkGveaI~~vGDGyddLI~G~~a~id~~vDvfVvEGgP 256 (505)
T PF10113_consen 207 EMEEVAELAKKYGKGVEAIMHVGDGYDDLITGLKACIDMGVDVFVVEGGP 256 (505)
T ss_pred HHHHHHHHHHHhCCCceEEEEecCChHHHHHHHHHHHhcCCcEEEEeCCC
Confidence 4555667888999888999999999987654 444566665555443
No 378
>TIGR01615 A_thal_3542 uncharacterized plant-specific domain TIGR01615. of a number of uncharacterized plant proteins. The domain is strongly conserved (greater than 30 % sequence identity between most pairs of members) but flanked by highly divergent regions including stretches of low-complexity sequence.
Probab=24.54 E-value=2.5e+02 Score=22.53 Aligned_cols=84 Identities=17% Similarity=0.177 Sum_probs=52.0
Q ss_pred HHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCH
Q 019226 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDP 265 (344)
Q Consensus 186 ~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~ 265 (344)
.++..|+..||.-+|+...-..... . .-..+.-+|+++. .+++ ....|+|+-..+..+....+|..
T Consensus 3 ~v~~~Lr~~Gy~AaiCkS~W~~s~~-----~-p~G~yeyidV~~~-------~~~~-~~~~R~iVd~dFr~~FeiARpt~ 68 (131)
T TIGR01615 3 IVMSLLRSLGYDAAICKSKWDSSGD-----I-PAGKYEYIDVVDG-------DGSK-KQEMRVIIDLDFRSEFEIARPTE 68 (131)
T ss_pred hHHHHHHHCCCCeeeEEeecCCCCC-----C-CCCceeeEEEEec-------CCCC-CCcceEEEeccchhhceecCCCH
Confidence 4678999999999998765332111 1 1122222444443 1222 23468888777777777788887
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCH
Q 019226 266 SIYVTAAKRLGISEKDCLVVEDSV 289 (344)
Q Consensus 266 ~~~~~~~~~lgv~~~~~i~vGDs~ 289 (344)
+ |..+++.|=. +|||-..
T Consensus 69 ~-Y~~ll~~LP~-----vFVG~~~ 86 (131)
T TIGR01615 69 E-YKRLLESLPE-----VFVGTTE 86 (131)
T ss_pred H-HHHHHHhCCc-----ceECCHH
Confidence 7 7888887643 8887554
No 379
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=24.32 E-value=3.7e+02 Score=22.35 Aligned_cols=31 Identities=23% Similarity=0.211 Sum_probs=19.6
Q ss_pred HHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++++.+.+++.+++++-+ ....++...+.+
T Consensus 36 ~~ll~~~~~~~~~v~llG~-~~~~~~~~~~~l 66 (171)
T cd06533 36 PALLELAAQKGLRVFLLGA-KPEVLEKAAERL 66 (171)
T ss_pred HHHHHHHHHcCCeEEEECC-CHHHHHHHHHHH
Confidence 4667777777888888844 444455544443
No 380
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=24.10 E-value=1.2e+02 Score=23.34 Aligned_cols=28 Identities=21% Similarity=0.315 Sum_probs=23.1
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
...++.+.++.+|++|.+++++|+....
T Consensus 65 ~~~~~~~~~~~ak~~g~~vi~iT~~~~~ 92 (131)
T PF01380_consen 65 ETRELIELLRFAKERGAPVILITSNSES 92 (131)
T ss_dssp TTHHHHHHHHHHHHTTSEEEEEESSTTS
T ss_pred cchhhhhhhHHHHhcCCeEEEEeCCCCC
Confidence 4456788899999999999999987654
No 381
>COG1911 RPL30 Ribosomal protein L30E [Translation, ribosomal structure and biogenesis]
Probab=23.97 E-value=1.5e+02 Score=22.39 Aligned_cols=43 Identities=12% Similarity=0.091 Sum_probs=33.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
...=|..+.++.++...-+++|+..+.+...+..++..-.+..
T Consensus 19 kvilG~k~tiK~lk~gkaKliiiAsN~P~~~k~~ieyYAkLs~ 61 (100)
T COG1911 19 KVILGSKRTIKSLKLGKAKLIIIASNCPKELKEDIEYYAKLSD 61 (100)
T ss_pred CEEEehHHHHHHHHcCCCcEEEEecCCCHHHHHHHHHHHHHcC
Confidence 5667899999999998888888877777778877777644443
No 382
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=23.79 E-value=1.3e+02 Score=21.50 Aligned_cols=45 Identities=20% Similarity=0.340 Sum_probs=36.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
+...-|-...++.+++++++++..+..|-+..-.+..++.||--.
T Consensus 22 VpE~aPftAvlkfaAEeFkv~~~TsAiiTndGvGINP~qtAGnvf 66 (82)
T cd01766 22 VPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVF 66 (82)
T ss_pred ccccCchHHHHHHHHHhcCCCccceeEEecCccccChhhccccee
Confidence 334557788999999999999999988888777888888888543
No 383
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=23.68 E-value=85 Score=28.36 Aligned_cols=28 Identities=25% Similarity=0.194 Sum_probs=24.1
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
..+.+.++++.+|+.|+++++.||+...
T Consensus 97 q~e~~~~~~~~ake~Gl~~~l~TnG~~~ 124 (260)
T COG1180 97 QAEFALDLLRAAKERGLHVALDTNGFLP 124 (260)
T ss_pred hHHHHHHHHHHHHHCCCcEEEEcCCCCC
Confidence 4466889999999999999999999764
No 384
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=23.53 E-value=91 Score=27.56 Aligned_cols=30 Identities=7% Similarity=-0.003 Sum_probs=24.7
Q ss_pred CCccCccH-HHHHHHHHHcCCeEEEEeCCCh
Q 019226 177 TVEPRPGV-LRLMDEAKAAGKKVAVCSAATK 206 (344)
Q Consensus 177 ~~~~~pgv-~~~l~~Lk~~g~~v~ivTn~~~ 206 (344)
...+.++. .++++.+++.|+++.+.||+..
T Consensus 80 EPll~~~~~~~l~~~~k~~g~~i~l~TNG~~ 110 (246)
T PRK11145 80 EAILQAEFVRDWFRACKKEGIHTCLDTNGFV 110 (246)
T ss_pred cHhcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 34556774 5999999999999999999975
No 385
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=23.48 E-value=57 Score=23.66 Aligned_cols=18 Identities=22% Similarity=0.455 Sum_probs=14.4
Q ss_pred ccEEEEecCccccccchh
Q 019226 67 LQALIFDCDGVIIESEHL 84 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~ 84 (344)
.-.++++-|||.++++..
T Consensus 40 ~~~lvL~eDGTeVddEeY 57 (78)
T cd01615 40 PVTLVLEEDGTEVDDEEY 57 (78)
T ss_pred CeEEEEeCCCcEEccHHH
Confidence 446899999999987644
No 386
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=23.42 E-value=3.5e+02 Score=20.91 Aligned_cols=43 Identities=12% Similarity=-0.004 Sum_probs=22.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEe-cCHh-hHHHHHHcCCeEEE
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVE-DSVI-GLQAATRAGMACVI 304 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vG-Ds~~-Di~~a~~aG~~~v~ 304 (344)
..+...-+...+++.+.+ +-.+++| .... +++..+++|+..+.
T Consensus 63 ~~~~~~~~~~~L~~~~~~-~i~i~~GG~~~~~~~~~~~~~G~d~~~ 107 (122)
T cd02071 63 HMTLFPEVIELLRELGAG-DILVVGGGIIPPEDYELLKEMGVAEIF 107 (122)
T ss_pred hHHHHHHHHHHHHhcCCC-CCEEEEECCCCHHHHHHHHHCCCCEEE
Confidence 333333344444444443 3345555 3333 67778889987653
No 387
>KOG4584 consensus Uncharacterized conserved protein [General function prediction only]
Probab=23.24 E-value=3.2e+02 Score=25.37 Aligned_cols=122 Identities=19% Similarity=0.244 Sum_probs=62.4
Q ss_pred CCccCccHHHHHHHHHHcCCeE------EEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKV------AVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCV 250 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v------~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 250 (344)
.+..+|++.+.+..|.+.|.++ .+.-|-+.........-+ ..+....| ..
T Consensus 117 Aia~fP~vv~~lDal~dE~~Rle~LvrGilAGNiFDwGa~~~~~il-~~~~~f~f---~~-------------------- 172 (348)
T KOG4584|consen 117 AIALFPQVVRLLDALEDEGTRLENLVRGILAGNIFDWGAKAVVKIL-ESASVFGF---LA-------------------- 172 (348)
T ss_pred HHHHhHHHHHHHhhhcchhHHHHHHHHHHHhcchhhhHHHHHHHHH-hccccchH---HH--------------------
Confidence 3578899999999888665332 233344444333333332 22222111 11
Q ss_pred cccCCCCCCCCCCC-HHHHHHHHHHcCCCCCcEEE-Eec-CHhhH--------HHHHHcCCeEEEEeCCCchhhhccccc
Q 019226 251 CAHQGDDVKQKKPD-PSIYVTAAKRLGISEKDCLV-VED-SVIGL--------QAATRAGMACVITYTSSTAEQDFKDAI 319 (344)
Q Consensus 251 ~~~~~~~~~~~KP~-~~~~~~~~~~lgv~~~~~i~-vGD-s~~Di--------~~a~~aG~~~v~v~~~~~~~~~l~~~~ 319 (344)
..+....+|- -+-|+...+++--+|.+|+. ++| |..|+ .....-|...+.+..
T Consensus 173 ----a~~~l~~RPWl~D~ld~f~~r~~~~p~K~~lif~DNSG~DvILGilPf~Rellr~gt~vil~an------------ 236 (348)
T KOG4584|consen 173 ----ALQNLESRPWLVDDLDSFLARLKGKPHKCALIFVDNSGFDVILGILPFARELLRRGTEVILCAN------------ 236 (348)
T ss_pred ----HHhhhhcCCeeeccHHHHHHHhcCCCcceEEEEecCCCcceeeeecHHHHHHHhCCCeEEEEec------------
Confidence 1112223332 35577777887677777664 465 33454 223345666655432
Q ss_pred cccCCccccCHHHHHHHHHH
Q 019226 320 AIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 320 ~~~~~~~~~~~~~l~~ll~~ 339 (344)
.-|-+.+++.++|..++..
T Consensus 237 -s~palNdvt~~el~~l~~~ 255 (348)
T KOG4584|consen 237 -SSPALNDVTYSELKELAAE 255 (348)
T ss_pred -CcchhccccHHHHHHHHHh
Confidence 2344555666666666543
No 388
>KOG0391 consensus SNF2 family DNA-dependent ATPase [General function prediction only]
Probab=23.23 E-value=1.9e+02 Score=32.30 Aligned_cols=92 Identities=16% Similarity=0.231 Sum_probs=50.6
Q ss_pred HHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCH
Q 019226 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDP 265 (344)
Q Consensus 186 ~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~ 265 (344)
=+|++|+..|.++.|+|--.. +..+++..+....| - ++- -| +--..
T Consensus 1267 iLLqQLk~eghRvLIfTQMtk--mLDVLeqFLnyHgy---l-Y~R-------------------------LD---g~t~v 1312 (1958)
T KOG0391|consen 1267 ILLQQLKSEGHRVLIFTQMTK--MLDVLEQFLNYHGY---L-YVR-------------------------LD---GNTSV 1312 (1958)
T ss_pred HHHHHHHhcCceEEehhHHHH--HHHHHHHHHhhcce---E-EEE-------------------------ec---CCccH
Confidence 457899999999999986443 33444443221111 1 111 01 11123
Q ss_pred HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 266 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 266 ~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
+--+.+.++++.++.-.+||=-+-..-.+..--|..+|.+++...+
T Consensus 1313 EqRQaLmerFNaD~RIfcfILSTrSggvGiNLtgADTVvFYDsDwN 1358 (1958)
T KOG0391|consen 1313 EQRQALMERFNADRRIFCFILSTRSGGVGINLTGADTVVFYDSDWN 1358 (1958)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccCCccccccccCceEEEecCCCC
Confidence 4445666777777666666655544444555566777666555443
No 389
>PRK04940 hypothetical protein; Provisional
Probab=23.09 E-value=1.9e+02 Score=24.57 Aligned_cols=57 Identities=16% Similarity=0.144 Sum_probs=36.5
Q ss_pred CcEEEEecCHhhHHH---HHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 280 KDCLVVEDSVIGLQA---ATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 280 ~~~i~vGDs~~Di~~---a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
++++.||-|.-..-+ |...|+++|++|........+......-.++.+++.+.+.+|
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL 119 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNF 119 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHh
Confidence 568999999865544 478999999999777765554432222223445555544443
No 390
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=23.01 E-value=5e+02 Score=24.88 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=27.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEE-EeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAV-CSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~i-vTn~~~~~~~~~l~~ 215 (344)
...+|..++++.|+++|+.+.+ =||.+.+.+...++.
T Consensus 174 PE~~~~~~~i~~l~~~gi~vs~GHs~A~~~~~~~a~~~ 211 (380)
T TIGR00221 174 PEEDQHFELIRHLKDAGIIVSAGHTNATYELAKAAFKA 211 (380)
T ss_pred CCCCChHHHHHHHHHCCeEEEeeCCCCCHHHHHHHHHc
Confidence 3468899999999999998876 467766666655544
No 391
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=22.98 E-value=1.2e+02 Score=26.55 Aligned_cols=43 Identities=12% Similarity=0.176 Sum_probs=30.4
Q ss_pred HHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccc
Q 019226 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQ 233 (344)
Q Consensus 186 ~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~ 233 (344)
++++ ++++|++++++|+.....+...+..+ ++.. .+.+++.+|
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l-~l~~---~~~~I~~nG 64 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKL-NLPS---PDVLIARVG 64 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhC-CCCC---CCEEEECCC
Confidence 4454 47789999999999999999988876 4432 244555333
No 392
>PRK13529 malate dehydrogenase; Provisional
Probab=22.97 E-value=8.2e+02 Score=24.94 Aligned_cols=22 Identities=18% Similarity=0.058 Sum_probs=12.9
Q ss_pred CCCHHHHHHHHHHc-CCCCCcEE
Q 019226 262 KPDPSIYVTAAKRL-GISEKDCL 283 (344)
Q Consensus 262 KP~~~~~~~~~~~l-gv~~~~~i 283 (344)
.|-+.+...+-..+ |++|++|+
T Consensus 169 m~I~~GKl~Ly~a~aGI~P~~~l 191 (563)
T PRK13529 169 MGIPIGKLSLYTACGGIDPARTL 191 (563)
T ss_pred ccccccHHHHhhccCCCChhhee
Confidence 33334434444444 79999987
No 393
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=22.96 E-value=2.7e+02 Score=26.50 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=33.0
Q ss_pred ecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCc
Q 019226 73 DCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSS 141 (344)
Q Consensus 73 D~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 141 (344)
|+|++++.++......+.+.+++.|++..-.. . -...+...+.....++.++|++..
T Consensus 27 ~id~vi~g~E~~l~~~~~d~l~~~Gi~~~g~s----------~--~a~~l~~dK~~~k~~l~~~gIptp 83 (379)
T PRK13790 27 NVDWVVIGPEQPLIDGLADILRANGFKVFGPN----------K--QAAQIEGSKLFAKKIMEKYNIPTA 83 (379)
T ss_pred CCCEEEECCcHHHHHHHHHHHHhCCCcEECCC----------H--HHHHHhCCHHHHHHHHHHCCCCCC
Confidence 44555555555555567777777887532100 1 112345566667788888888754
No 394
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=22.71 E-value=3.3e+02 Score=20.71 Aligned_cols=22 Identities=18% Similarity=0.199 Sum_probs=17.2
Q ss_pred HHHHHHHHHcCCeEEEEeCCCh
Q 019226 185 LRLMDEAKAAGKKVAVCSAATK 206 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~ 206 (344)
..+.+.++++|+...++|+...
T Consensus 3 ~rl~~~m~~~gid~lll~~~~n 24 (132)
T PF01321_consen 3 ERLRAAMAEAGIDALLLTSPEN 24 (132)
T ss_dssp HHHHHHHHHTT-SEEEEESHHH
T ss_pred HHHHHHHHHCCCCEEEEcChhh
Confidence 4567889999999999999744
No 395
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=22.62 E-value=2.9e+02 Score=23.27 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=24.7
Q ss_pred HcCCCCCcEEEEecCHhhHHHHHHc----CCeEEEEeCCC
Q 019226 274 RLGISEKDCLVVEDSVIGLQAATRA----GMACVITYTSS 309 (344)
Q Consensus 274 ~lgv~~~~~i~vGDs~~Di~~a~~a----G~~~v~v~~~~ 309 (344)
....+.+++++||++..|+..|.+. |-..+.+..+.
T Consensus 60 S~ahDshniiviG~~~~dm~~A~n~l~~~gGG~vvv~~g~ 99 (171)
T PF13382_consen 60 SVAHDSHNIIVIGTNDEDMALAANRLIEMGGGIVVVDDGE 99 (171)
T ss_dssp S--TTT--EEEEESSHHHHHHHHHHHHHTTSEEEEEETTE
T ss_pred EcccCCCCEEEEECCHHHHHHHHHHHHHhCCCEEEEECCE
Confidence 3456789999999999999988775 66666665543
No 396
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=22.34 E-value=61 Score=23.62 Aligned_cols=18 Identities=33% Similarity=0.532 Sum_probs=14.5
Q ss_pred ccEEEEecCccccccchh
Q 019226 67 LQALIFDCDGVIIESEHL 84 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~ 84 (344)
.-.|+++-|||.++++..
T Consensus 42 ~~~lvL~eDGT~VddEey 59 (80)
T cd06536 42 PITLVLAEDGTIVEDEDY 59 (80)
T ss_pred ceEEEEecCCcEEccHHH
Confidence 357889999999987644
No 397
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=22.21 E-value=3.4e+02 Score=24.08 Aligned_cols=21 Identities=19% Similarity=0.132 Sum_probs=9.8
Q ss_pred cCccHHHHHHHHHHcCCeEEE
Q 019226 180 PRPGVLRLMDEAKAAGKKVAV 200 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~i 200 (344)
+.++..++.+.|++.|..+..
T Consensus 11 p~~~~~~l~~~l~~~G~~~~~ 31 (255)
T PRK05752 11 PAEECAALAASLAEAGIFSSS 31 (255)
T ss_pred cHHHHHHHHHHHHHcCCCEEE
Confidence 344444455555555544433
No 398
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=22.02 E-value=6.9e+02 Score=24.26 Aligned_cols=70 Identities=23% Similarity=0.288 Sum_probs=41.6
Q ss_pred CeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHc
Q 019226 196 KKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRL 275 (344)
Q Consensus 196 ~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~l 275 (344)
.+|+|+|..+......++..+ . .+++.++..+. .. ...+.-.+.-+..+++.+
T Consensus 136 ~~I~viTs~~gAa~~D~~~~~-~-~r~p~~~~~~~------------------------~~-~vQG~~A~~~i~~al~~~ 188 (438)
T PRK00286 136 KRIGVITSPTGAAIRDILTVL-R-RRFPLVEVIIY------------------------PT-LVQGEGAAASIVAAIERA 188 (438)
T ss_pred CEEEEEeCCccHHHHHHHHHH-H-hcCCCCeEEEe------------------------cC-cCcCccHHHHHHHHHHHh
Confidence 589999999988888887776 2 23333344333 12 222444456666667776
Q ss_pred CCCCCcEEEE---ecCHhhH
Q 019226 276 GISEKDCLVV---EDSVIGL 292 (344)
Q Consensus 276 gv~~~~~i~v---GDs~~Di 292 (344)
+-..-++|.| |-+..|+
T Consensus 189 ~~~~~Dviii~RGGGS~eDL 208 (438)
T PRK00286 189 NARGEDVLIVARGGGSLEDL 208 (438)
T ss_pred cCCCCCEEEEecCCCCHHHh
Confidence 6533477777 3333465
No 399
>COG2237 Predicted membrane protein [Function unknown]
Probab=21.99 E-value=1.5e+02 Score=28.03 Aligned_cols=18 Identities=22% Similarity=0.331 Sum_probs=13.5
Q ss_pred CCCCcEEEEecCHhhHHH
Q 019226 277 ISEKDCLVVEDSVIGLQA 294 (344)
Q Consensus 277 v~~~~~i~vGDs~~Di~~ 294 (344)
.+|+.|++|.|+..|=..
T Consensus 97 ~~pd~av~VsDGaeDe~i 114 (364)
T COG2237 97 LDPDDAVVVSDGAEDERI 114 (364)
T ss_pred CCCcEEEEeccCcccchh
Confidence 357889999999987443
No 400
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=21.93 E-value=1.1e+02 Score=28.84 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=26.0
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCCh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATK 206 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~ 206 (344)
+..-+.|+..++++.+++.|+.+.+.||+..
T Consensus 62 GEPll~~~~~~ii~~~~~~g~~~~l~TNG~l 92 (358)
T TIGR02109 62 GEPLARPDLVELVAHARRLGLYTNLITSGVG 92 (358)
T ss_pred ccccccccHHHHHHHHHHcCCeEEEEeCCcc
Confidence 3455778999999999999999999999864
No 401
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=21.69 E-value=8e+02 Score=24.38 Aligned_cols=30 Identities=30% Similarity=0.357 Sum_probs=23.9
Q ss_pred CCCCcEEEEecCHhhHHHHHHc---CCeEEEEe
Q 019226 277 ISEKDCLVVEDSVIGLQAATRA---GMACVITY 306 (344)
Q Consensus 277 v~~~~~i~vGDs~~Di~~a~~a---G~~~v~v~ 306 (344)
....+++.||-++..+.+|..+ |.+++++.
T Consensus 210 ~~~~dVvIIGgGpAGl~AA~~la~~G~~v~li~ 242 (515)
T TIGR03140 210 LDPYDVLVVGGGPAGAAAAIYAARKGLRTAMVA 242 (515)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEe
Confidence 4457899999999999888765 78877764
No 402
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]
Probab=21.68 E-value=5.4e+02 Score=22.35 Aligned_cols=73 Identities=19% Similarity=0.152 Sum_probs=43.5
Q ss_pred HHHHHHHHHcCCeEEEEeCCChhhH-HHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC
Q 019226 185 LRLMDEAKAAGKKVAVCSAATKSSV-ILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP 263 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~~~~-~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 263 (344)
..+++.|+++ |++++++|.-.... ...+.+. . -+.++. ++.|. .+.-
T Consensus 31 e~~~~~L~~~-~~~aVI~~Di~t~~Da~~l~~~-----~--g~~i~~-------v~TG~-----------------~CH~ 78 (202)
T COG0378 31 EKTLRALKDE-YKIAVITGDIYTKEDADRLRKL-----P--GEPIIG-------VETGK-----------------GCHL 78 (202)
T ss_pred HHHHHHHHhh-CCeEEEeceeechhhHHHHHhC-----C--CCeeEE-------eccCC-----------------ccCC
Confidence 4567788888 99999999754311 1112221 1 123333 11221 1236
Q ss_pred CHHHHHHHHHHcCCCC--CcEEEEecCH
Q 019226 264 DPSIYVTAAKRLGISE--KDCLVVEDSV 289 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~--~~~i~vGDs~ 289 (344)
+..+...+++++.... -+.++|....
T Consensus 79 da~m~~~ai~~l~~~~~~~Dll~iEs~G 106 (202)
T COG0378 79 DASMNLEAIEELVLDFPDLDLLFIESVG 106 (202)
T ss_pred cHHHHHHHHHHHhhcCCcCCEEEEecCc
Confidence 7788888988887642 4899998777
No 403
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=21.53 E-value=6.3e+02 Score=23.09 Aligned_cols=59 Identities=8% Similarity=-0.046 Sum_probs=37.0
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccc---cccc---cCCccccCHHHHHHHHHHhh
Q 019226 283 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD---AIAI---YPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 283 i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~---~~~~---~~~~~~~~~~~l~~ll~~~~ 341 (344)
++||..-.-+.+|.+.|..+|.+-.+.......+- .... -.++..++++++.+-++++.
T Consensus 256 l~I~nDSGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~~~~cm~~I~~e~V~~~~~~~l 320 (322)
T PRK10964 256 AVVSVDTGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRSPGKSMADLSAETVFQKLETLI 320 (322)
T ss_pred EEEecCCcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecCCCcccccCCHHHHHHHHHHHh
Confidence 56655555588999999999988765443211111 0011 24678888888888777654
No 404
>PRK06801 hypothetical protein; Provisional
Probab=21.46 E-value=6.4e+02 Score=23.14 Aligned_cols=99 Identities=11% Similarity=-0.002 Sum_probs=63.4
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCC-
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQK- 261 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 261 (344)
.+.++|+..++.||-|+-+.-.+.+.++.+++.. . .. ....++.+ +......
T Consensus 5 ~~~~~l~~A~~~~yaV~Afn~~n~e~~~avi~AA-e--~~-~~PvIl~~-----------------------~~~~~~~~ 57 (286)
T PRK06801 5 SLANGLAHARKHGYALGAFNVLDSHFLRALFAAA-K--QE-RSPFIINI-----------------------AEVHFKYI 57 (286)
T ss_pred cHHHHHHHHHHCCceEEEEeeCCHHHHHHHHHHH-H--HH-CCCEEEEe-----------------------CcchhhcC
Confidence 4788999999999999988888888888888776 2 21 12444441 1111111
Q ss_pred --CCCHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 262 --KPDPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 262 --KP~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+.-..+...++++..++ =+++. |.....+..|.++|+++|++.....
T Consensus 58 ~~~~~~~~~~~~a~~~~vp--V~lHlDH~~~~e~i~~Ai~~GftSVm~D~S~l 108 (286)
T PRK06801 58 SLESLVEAVKFEAARHDIP--VVLNLDHGLHFEAVVRALRLGFSSVMFDGSTL 108 (286)
T ss_pred CHHHHHHHHHHHHHHCCCC--EEEECCCCCCHHHHHHHHHhCCcEEEEcCCCC
Confidence 12234555666666664 33444 3445688888899999999965543
No 405
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=21.43 E-value=5.4e+02 Score=22.24 Aligned_cols=15 Identities=20% Similarity=0.275 Sum_probs=7.9
Q ss_pred hHHHHHHcCCeEEEE
Q 019226 291 GLQAATRAGMACVIT 305 (344)
Q Consensus 291 Di~~a~~aG~~~v~v 305 (344)
++..|..+|..+++.
T Consensus 75 ~~~~a~~aGA~fivs 89 (206)
T PRK09140 75 QVDRLADAGGRLIVT 89 (206)
T ss_pred HHHHHHHcCCCEEEC
Confidence 555555555555443
No 406
>COG1533 SplB DNA repair photolyase [DNA replication, recombination, and repair]
Probab=21.24 E-value=5.3e+02 Score=23.82 Aligned_cols=23 Identities=9% Similarity=0.164 Sum_probs=18.2
Q ss_pred HHHHHHHHHHcCCeEEEEeCCCh
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATK 206 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~ 206 (344)
++..++.+...|.++.|+|-+..
T Consensus 105 tR~ilei~~~~~~~v~I~TKS~l 127 (297)
T COG1533 105 TRKILEILLKYGFPVSIVTKSAL 127 (297)
T ss_pred HHHHHHHHHHcCCcEEEEECCcc
Confidence 35667777888999999998774
No 407
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.22 E-value=5.6e+02 Score=25.21 Aligned_cols=99 Identities=20% Similarity=0.250 Sum_probs=60.0
Q ss_pred ccCccHHHHHHHHHHc-CCeEEEEe-CC-ChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 179 EPRPGVLRLMDEAKAA-GKKVAVCS-AA-TKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~-g~~v~ivT-n~-~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
...|.+.+-|+.|-++ |++++-.. +. ....++..++.+ ... .+|.++.
T Consensus 138 ~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~al~~a-k~~---~~DvvIv------------------------- 188 (451)
T COG0541 138 TYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALEKA-KEE---GYDVVIV------------------------- 188 (451)
T ss_pred cCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHHHHHH-HHc---CCCEEEE-------------------------
Confidence 4568888888888777 66655442 22 233455566554 222 2466654
Q ss_pred CCCCCCCCCHHHHHHHHHHcC-CCCCcEEEEecCHhhHHHHH-------HcCCeEEEEe
Q 019226 256 DDVKQKKPDPSIYVTAAKRLG-ISEKDCLVVEDSVIGLQAAT-------RAGMACVITY 306 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lg-v~~~~~i~vGDs~~Di~~a~-------~aG~~~v~v~ 306 (344)
|.-++-.=+.+.++.+.+--. +.|+++++|=|+...=.+.. +.|++.|.+.
T Consensus 189 DTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 189 DTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred eCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 333444446677777766544 57999999999875333322 2478877663
No 408
>PLN02151 trehalose-phosphatase
Probab=20.97 E-value=1.3e+02 Score=28.60 Aligned_cols=36 Identities=8% Similarity=-0.028 Sum_probs=30.2
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHH
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE 214 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~ 214 (344)
..+.|++.+.|+.|.+ +++++|+|+.....++..+.
T Consensus 119 A~~~~~~~~aL~~La~-~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 119 AFMSKKMRNTVRKLAK-CFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred ccCCHHHHHHHHHHhc-CCCEEEEECCCHHHHHHHcC
Confidence 5788999999999994 57999999999887766653
No 409
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=20.86 E-value=4.5e+02 Score=21.83 Aligned_cols=75 Identities=20% Similarity=0.219 Sum_probs=41.5
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCC
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKP 263 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP 263 (344)
+.++++.+.++|.+++++-+.. ..++...+.+ ...|.+...+ +...+..
T Consensus 37 ~~~l~~~~~~~~~~ifllG~~~-~~~~~~~~~l--~~~yP~l~iv--------------------------g~~~g~f-- 85 (172)
T PF03808_consen 37 FPDLLRRAEQRGKRIFLLGGSE-EVLEKAAANL--RRRYPGLRIV--------------------------GYHHGYF-- 85 (172)
T ss_pred HHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHH--HHHCCCeEEE--------------------------EecCCCC--
Confidence 3566677777788888886654 3355444443 1333323333 1111111
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCH
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSV 289 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~ 289 (344)
++.-.+.+++..+-..-++++||=+.
T Consensus 86 ~~~~~~~i~~~I~~~~pdiv~vglG~ 111 (172)
T PF03808_consen 86 DEEEEEAIINRINASGPDIVFVGLGA 111 (172)
T ss_pred ChhhHHHHHHHHHHcCCCEEEEECCC
Confidence 44556666666666666778877665
No 410
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=20.73 E-value=1.3e+02 Score=25.14 Aligned_cols=28 Identities=21% Similarity=0.318 Sum_probs=24.1
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
-.+++.+.++.++++|.+++.+|+....
T Consensus 84 ~t~~~i~~~~~ak~~g~~ii~IT~~~~s 111 (179)
T TIGR03127 84 ETESLVTVAKKAKEIGATVAAITTNPES 111 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 4567889999999999999999997664
No 411
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=20.63 E-value=5.9e+02 Score=22.41 Aligned_cols=118 Identities=11% Similarity=0.024 Sum_probs=61.5
Q ss_pred HHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCC
Q 019226 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPD 264 (344)
Q Consensus 185 ~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~ 264 (344)
.++++.|.+.++ +.|+.+.+......+.+.+.. ..+..++.... -|.
T Consensus 6 ~~~~~~l~~~~v-i~Vvr~~~~~~a~~~~~al~~-gGi~~iEiT~~-------------------------------tp~ 52 (222)
T PRK07114 6 IAVLTAMKATGM-VPVFYHADVEVAKKVIKACYD-GGARVFEFTNR-------------------------------GDF 52 (222)
T ss_pred HHHHHHHHhCCE-EEEEEcCCHHHHHHHHHHHHH-CCCCEEEEeCC-------------------------------CCc
Confidence 356777777765 777888888878887777622 11111222222 222
Q ss_pred -HHHHHHHHHHcCCCCCcEEEEecC--H--hhHHHHHHcCCeEEEEeCCCchhhhccc-cccccCCc-cccCHHHHHHHH
Q 019226 265 -PSIYVTAAKRLGISEKDCLVVEDS--V--IGLQAATRAGMACVITYTSSTAEQDFKD-AIAIYPDL-SNVRLKDLELLL 337 (344)
Q Consensus 265 -~~~~~~~~~~lgv~~~~~i~vGDs--~--~Di~~a~~aG~~~v~v~~~~~~~~~l~~-~~~~~~~~-~~~~~~~l~~ll 337 (344)
.+.++.+.++++-...+ +.||=+ . .+++.|..+|..+++- +..+.+.+.. ...-++-+ .-.++.|+...+
T Consensus 53 a~~~i~~l~~~~~~~~p~-~~vGaGTVl~~e~a~~a~~aGA~FiVs--P~~~~~v~~~~~~~~i~~iPG~~TpsEi~~A~ 129 (222)
T PRK07114 53 AHEVFAELVKYAAKELPG-MILGVGSIVDAATAALYIQLGANFIVT--PLFNPDIAKVCNRRKVPYSPGCGSLSEIGYAE 129 (222)
T ss_pred HHHHHHHHHHHHHhhCCC-eEEeeEeCcCHHHHHHHHHcCCCEEEC--CCCCHHHHHHHHHcCCCEeCCCCCHHHHHHHH
Confidence 24445554455433223 345544 2 4888888899998753 3333333221 11222222 233667776665
Q ss_pred H
Q 019226 338 Q 338 (344)
Q Consensus 338 ~ 338 (344)
+
T Consensus 130 ~ 130 (222)
T PRK07114 130 E 130 (222)
T ss_pred H
Confidence 5
No 412
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=20.47 E-value=71 Score=23.24 Aligned_cols=18 Identities=28% Similarity=0.648 Sum_probs=14.4
Q ss_pred ccEEEEecCccccccchh
Q 019226 67 LQALIFDCDGVIIESEHL 84 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~ 84 (344)
.-.|+++-|||.++++..
T Consensus 39 ~~~lvL~eDGT~Vd~Eey 56 (79)
T cd06538 39 ISSLVLDEDGTGVDTEEF 56 (79)
T ss_pred ccEEEEecCCcEEccHHH
Confidence 356999999999987644
No 413
>COG4018 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.36 E-value=85 Score=29.39 Aligned_cols=44 Identities=16% Similarity=0.094 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc----CCeEEEEeCC
Q 019226 265 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA----GMACVITYTS 308 (344)
Q Consensus 265 ~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a----G~~~v~v~~~ 308 (344)
.......+++.|--.+-++||||++.|+.-.-.| +.....+..+
T Consensus 208 mk~VaEtArk~GkGveaI~hvgDGyDdli~G~kA~ve~~vDvfvvEGg 255 (505)
T COG4018 208 MKRVAETARKSGKGVEAILHVGDGYDDLIDGLKAAVEEVVDVFVVEGG 255 (505)
T ss_pred HHHHHHHHHHhCCCceeEEEecCCcHHHHHHHHHHHHhcCcEEEEcCC
Confidence 3445566778888889999999999876554444 5554444433
No 414
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=20.30 E-value=2.8e+02 Score=24.65 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=25.6
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
...+|.+.+..|.+.|..+.+||.--. +++.+..+
T Consensus 171 lv~EVL~vm~~LA~eGmTMivVTHEM~-FAr~Vadr 205 (240)
T COG1126 171 LVGEVLDVMKDLAEEGMTMIIVTHEMG-FAREVADR 205 (240)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEechhH-HHHHhhhe
Confidence 344678899999999999999998443 34444444
Done!