Query 019227
Match_columns 344
No_of_seqs 276 out of 1821
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 12:50:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019227.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019227hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 4.3E-31 1.5E-35 252.1 15.2 170 78-320 6-175 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 2.6E-28 9.1E-33 235.7 14.1 169 80-320 24-192 (337)
3 2bon_A Lipid kinase; DAG kinas 99.9 2.9E-27 9.8E-32 228.2 9.8 171 78-321 27-198 (332)
4 2an1_A Putative kinase; struct 98.9 9.4E-09 3.2E-13 96.7 10.7 123 80-232 5-131 (292)
5 1yt5_A Inorganic polyphosphate 98.7 1.3E-08 4.6E-13 94.4 7.1 107 81-232 1-108 (258)
6 2i2c_A Probable inorganic poly 98.7 5.2E-08 1.8E-12 91.1 10.5 104 81-232 1-105 (272)
7 1u0t_A Inorganic polyphosphate 98.7 5.1E-08 1.7E-12 92.7 9.8 128 80-232 4-143 (307)
8 3afo_A NADH kinase POS5; alpha 97.6 0.00016 5.4E-09 70.9 9.1 127 79-233 40-184 (388)
9 1z0s_A Probable inorganic poly 96.3 0.016 5.4E-07 54.1 9.3 93 81-215 30-122 (278)
10 3pfn_A NAD kinase; structural 94.2 0.092 3.1E-06 50.8 7.3 70 146-232 107-176 (365)
11 3jzd_A Iron-containing alcohol 80.3 4.2 0.00014 38.8 7.7 86 80-186 36-121 (358)
12 3hl0_A Maleylacetate reductase 79.9 5 0.00017 38.1 8.1 86 80-186 34-119 (353)
13 3ors_A N5-carboxyaminoimidazol 76.1 22 0.00074 30.2 10.0 76 82-169 5-81 (163)
14 3okf_A 3-dehydroquinate syntha 72.4 13 0.00043 36.0 8.7 96 79-186 61-157 (390)
15 4grd_A N5-CAIR mutase, phospho 70.9 29 0.00098 29.8 9.5 76 81-169 13-90 (173)
16 3lp6_A Phosphoribosylaminoimid 70.3 29 0.00098 29.8 9.4 76 82-169 9-85 (174)
17 1sg6_A Pentafunctional AROM po 68.9 9.8 0.00034 36.5 7.1 101 80-193 36-148 (393)
18 3iv7_A Alcohol dehydrogenase I 68.2 5.6 0.00019 38.0 5.1 84 80-186 37-120 (364)
19 3uhj_A Probable glycerol dehyd 67.3 9.2 0.00032 36.8 6.5 85 81-186 53-138 (387)
20 1o2d_A Alcohol dehydrogenase, 66.2 50 0.0017 31.1 11.5 101 81-193 41-157 (371)
21 3qbe_A 3-dehydroquinate syntha 65.3 22 0.00075 34.0 8.7 93 81-186 44-137 (368)
22 2gru_A 2-deoxy-scyllo-inosose 62.5 12 0.00041 35.5 6.3 95 80-186 34-128 (368)
23 1u11_A PURE (N5-carboxyaminoim 59.9 78 0.0027 27.2 10.2 78 80-169 21-99 (182)
24 1xmp_A PURE, phosphoribosylami 59.6 54 0.0018 27.9 9.1 76 97-189 24-100 (170)
25 1oj7_A Hypothetical oxidoreduc 58.5 21 0.00071 34.3 7.2 101 81-193 51-168 (408)
26 3ce9_A Glycerol dehydrogenase; 57.7 37 0.0013 31.7 8.7 85 81-186 35-120 (354)
27 3kuu_A Phosphoribosylaminoimid 56.5 75 0.0026 27.1 9.5 75 82-168 14-89 (174)
28 3bfj_A 1,3-propanediol oxidore 56.3 64 0.0022 30.5 10.2 103 80-193 33-151 (387)
29 2ywx_A Phosphoribosylaminoimid 54.6 53 0.0018 27.6 8.1 61 97-168 12-73 (157)
30 3clh_A 3-dehydroquinate syntha 53.9 17 0.00057 34.2 5.5 94 80-186 26-119 (343)
31 3trh_A Phosphoribosylaminoimid 51.7 63 0.0021 27.5 8.2 74 82-168 8-83 (169)
32 3ox4_A Alcohol dehydrogenase 2 51.4 27 0.00094 33.2 6.7 101 80-193 31-147 (383)
33 1jq5_A Glycerol dehydrogenase; 50.9 28 0.00095 32.8 6.6 86 81-186 32-118 (370)
34 1pfk_A Phosphofructokinase; tr 50.8 19 0.00064 33.9 5.3 39 147-193 94-132 (320)
35 4b4k_A N5-carboxyaminoimidazol 50.4 1E+02 0.0035 26.5 9.4 77 79-168 20-99 (181)
36 1o4v_A Phosphoribosylaminoimid 50.1 79 0.0027 27.2 8.6 76 97-189 26-102 (183)
37 3rg8_A Phosphoribosylaminoimid 49.9 64 0.0022 27.1 7.9 65 97-169 15-81 (159)
38 1ta9_A Glycerol dehydrogenase; 48.3 50 0.0017 32.3 8.1 91 81-192 92-185 (450)
39 2hig_A 6-phospho-1-fructokinas 47.7 41 0.0014 33.5 7.4 44 147-193 189-233 (487)
40 1ujn_A Dehydroquinate synthase 46.9 26 0.0009 32.9 5.7 90 80-186 28-118 (348)
41 1vlj_A NADH-dependent butanol 45.7 86 0.0029 29.9 9.3 101 80-193 43-160 (407)
42 1rrm_A Lactaldehyde reductase; 44.1 38 0.0013 32.1 6.4 100 80-192 31-148 (386)
43 1zxx_A 6-phosphofructokinase; 43.5 19 0.00066 33.8 4.1 39 147-193 93-131 (319)
44 3oow_A Phosphoribosylaminoimid 43.2 1.2E+02 0.0042 25.6 8.7 76 97-189 18-94 (166)
45 3s4e_A Dual specificity protei 42.4 7.3 0.00025 31.4 0.9 33 16-48 73-106 (144)
46 2j16_A SDP-1, tyrosine-protein 41.6 7.4 0.00025 33.3 0.8 32 17-48 110-142 (182)
47 4aor_D Trypsin inhibitor 3; hy 40.1 6.8 0.00023 24.3 0.3 29 310-338 9-37 (37)
48 3ezz_A Dual specificity protei 39.9 9.2 0.00031 30.6 1.1 33 16-48 73-106 (144)
49 3emu_A Leucine rich repeat and 39.7 9.3 0.00032 31.6 1.1 32 17-48 80-112 (161)
50 1xah_A Sadhqs, 3-dehydroquinat 39.5 26 0.00089 32.9 4.4 93 81-186 32-124 (354)
51 2nt2_A Protein phosphatase sli 36.5 10 0.00035 30.4 0.9 32 17-48 74-106 (145)
52 4a3s_A 6-phosphofructokinase; 36.1 22 0.00075 33.3 3.2 44 147-198 93-139 (319)
53 3hbm_A UDP-sugar hydrolase; PS 35.4 1.1E+02 0.0037 27.8 7.8 29 146-186 224-252 (282)
54 1zzw_A Dual specificity protei 34.0 12 0.00041 30.1 0.9 31 17-47 76-107 (149)
55 3opy_A 6-phosphofructo-1-kinas 33.1 77 0.0026 34.2 7.1 46 147-193 688-733 (989)
56 2hcm_A Dual specificity protei 32.4 13 0.00044 30.5 0.9 31 18-48 83-114 (164)
57 3rgo_A Protein-tyrosine phosph 32.3 12 0.00042 30.0 0.7 32 17-48 82-114 (157)
58 1wrm_A Dual specificity phosph 32.2 13 0.00043 30.7 0.8 31 18-48 77-108 (165)
59 2f48_A Diphosphate--fructose-6 32.0 24 0.00081 35.8 2.9 45 147-193 166-210 (555)
60 3f6r_A Flavodoxin; FMN binding 31.7 1.5E+02 0.0051 23.2 7.3 30 80-111 1-30 (148)
61 2iz6_A Molybdenum cofactor car 30.5 57 0.002 27.7 4.7 35 147-187 44-79 (176)
62 3opy_B 6-phosphofructo-1-kinas 30.3 97 0.0033 33.3 7.3 46 147-193 662-707 (941)
63 1t35_A Hypothetical protein YV 29.6 59 0.002 27.9 4.7 34 148-187 33-67 (191)
64 3f81_A Dual specificity protei 29.3 16 0.00056 30.4 1.0 31 18-48 108-140 (183)
65 3o8o_B 6-phosphofructokinase s 29.1 45 0.0015 35.1 4.4 48 147-194 98-160 (766)
66 2esb_A Dual specificity protei 29.0 17 0.00057 30.9 1.0 31 18-48 91-122 (188)
67 3o8o_A 6-phosphofructokinase s 28.9 35 0.0012 36.1 3.5 47 147-193 99-160 (787)
68 2r0b_A Serine/threonine/tyrosi 28.2 17 0.00058 29.3 0.9 30 18-47 84-114 (154)
69 3cm3_A Late protein H1, dual s 27.8 16 0.00056 30.4 0.7 33 16-48 100-133 (176)
70 3o8l_A 6-phosphofructokinase, 27.8 1E+02 0.0034 32.4 6.8 46 147-193 489-534 (762)
71 2g6z_A Dual specificity protei 27.7 20 0.00067 31.4 1.2 32 17-48 76-108 (211)
72 1ydh_A AT5G11950; structural g 27.4 61 0.0021 28.5 4.4 32 148-185 41-73 (216)
73 3sbx_A Putative uncharacterize 27.2 59 0.002 28.0 4.2 33 148-186 44-77 (189)
74 2x9a_A Attachment protein G3P; 27.1 15 0.0005 26.2 0.2 12 149-160 39-50 (65)
75 2oud_A Dual specificity protei 26.3 18 0.00063 30.2 0.8 31 17-47 80-111 (177)
76 2e0t_A Dual specificity phosph 25.6 19 0.00065 28.9 0.7 26 23-48 84-110 (151)
77 2hxp_A Dual specificity protei 25.6 20 0.00069 29.1 0.9 31 18-48 79-110 (155)
78 2y96_A Dual specificity phosph 25.6 20 0.00069 31.3 0.9 31 18-48 132-164 (219)
79 2img_A Dual specificity protei 25.4 21 0.00071 28.3 0.9 30 19-48 84-114 (151)
80 1yz4_A DUSP15, dual specificit 25.0 23 0.00079 28.8 1.1 31 18-48 78-109 (160)
81 3rf7_A Iron-containing alcohol 24.7 3.2E+02 0.011 25.7 9.4 39 147-186 109-159 (375)
82 3o8o_A 6-phosphofructokinase s 24.5 1.2E+02 0.0041 32.0 6.6 46 147-193 483-528 (787)
83 3qua_A Putative uncharacterize 24.4 70 0.0024 27.8 4.2 34 148-187 53-87 (199)
84 2wc1_A Flavodoxin; electron tr 23.8 1.2E+02 0.004 25.0 5.4 28 80-109 1-28 (182)
85 3o8o_B 6-phosphofructokinase s 23.6 1.1E+02 0.0036 32.3 6.0 46 147-193 484-529 (766)
86 3hno_A Pyrophosphate-dependent 23.6 1.7E+02 0.0058 28.3 7.2 45 147-193 104-148 (419)
87 1rcu_A Conserved hypothetical 23.5 86 0.0029 27.1 4.6 34 147-186 57-90 (195)
88 2a33_A Hypothetical protein; s 23.3 85 0.0029 27.5 4.6 34 148-187 45-79 (215)
89 4erc_A Dual specificity protei 22.9 21 0.00073 28.3 0.5 30 18-47 82-112 (150)
90 2h31_A Multifunctional protein 22.8 2E+02 0.0069 27.9 7.5 76 81-169 266-344 (425)
91 2wgp_A Dual specificity protei 22.1 27 0.00091 29.6 1.0 32 17-48 96-128 (190)
92 2pq5_A Dual specificity protei 21.6 28 0.00095 29.9 1.0 26 23-48 130-156 (205)
93 3gw6_A Endo-N-acetylneuraminid 21.3 29 0.00099 31.8 1.1 13 149-161 47-59 (275)
94 3o8l_A 6-phosphofructokinase, 21.2 1.6E+02 0.0054 31.0 6.7 47 147-193 109-170 (762)
95 4hf7_A Putative acylhydrolase; 21.1 51 0.0017 27.7 2.6 40 153-197 57-96 (209)
96 1czn_A Flavodoxin; FMN binding 21.1 2.1E+02 0.0072 22.8 6.4 28 81-110 1-28 (169)
97 4fyk_A Deoxyribonucleoside 5'- 20.3 3.6E+02 0.012 22.1 7.7 105 81-196 2-113 (152)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=99.97 E-value=4.3e-31 Score=252.05 Aligned_cols=170 Identities=22% Similarity=0.211 Sum_probs=124.2
Q ss_pred CCCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 019227 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (344)
Q Consensus 78 ~~~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGD 157 (344)
..+++++||+||+||++++.+.++++++.|.+.+. ++.. +.|++.+|+.++++++. .+.+.||++|||
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~-~~~~-----~~t~~~~~a~~~~~~~~------~~~d~vv~~GGD 73 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFP-DLHI-----LHTKEQGDATKYCQEFA------SKVDLIIVFGGD 73 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCS-EEEE-----EECCSTTHHHHHHHHHT------TTCSEEEEEECH
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCC-eEEE-----EEccCcchHHHHHHHhh------cCCCEEEEEccc
Confidence 45789999999999999998999999999987643 3332 34678899999998642 367899999999
Q ss_pred hHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeEEEEEecCCC
Q 019227 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSG 237 (344)
Q Consensus 158 GTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~~~v~v~~~~g 237 (344)
||||||+|+|... ..++|||+||+||+|||||+||++ .++.+++ +.|.+|+.+++|+|++
T Consensus 74 GTl~~v~~~l~~~-----~~~~~l~iiP~Gt~N~~ar~lg~~----~~~~~a~----~~i~~g~~~~iDlg~v------- 133 (304)
T 3s40_A 74 GTVFECTNGLAPL-----EIRPTLAIIPGGTCNDFSRTLGVP----QNIAEAA----KLITKEHVKPVDVAKA------- 133 (304)
T ss_dssp HHHHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTCC----SSHHHHH----HHHTTCCEEEEEEEEE-------
T ss_pred hHHHHHHHHHhhC-----CCCCcEEEecCCcHHHHHHHcCCC----ccHHHHH----HHHHhCCeEEEEEEEE-------
Confidence 9999999999863 257899999999999999999995 4566554 4577899999999974
Q ss_pred CccCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhHhhhhhccCCcccccccCcceeeeeccc
Q 019227 238 EVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSC 317 (344)
Q Consensus 238 ~~~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~f~N~~siGfDA~V~~~f~~~R~~~p~~~~~~~~NK~~Y~~~~~ 317 (344)
+++||+|++|+||||+|++.+++.++ ++.+++.|...++
T Consensus 134 ---------------------------------~~~~F~~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~~l 172 (304)
T 3s40_A 134 ---------------------------------NGQHFLNFWGIGLVSEVSNNIDAEEK--------AKLGKIGYYLSTI 172 (304)
T ss_dssp ---------------------------------TTEEESSEEEEC--------------------------CHHHHTTTC
T ss_pred ---------------------------------CCEEEEEEEeehHHHHHHHhcCHHHh--------hcCCchHHHHHHH
Confidence 14699999999999999999885442 3458889998888
Q ss_pred cee
Q 019227 318 TQG 320 (344)
Q Consensus 318 ~~~ 320 (344)
+++
T Consensus 173 ~~l 175 (304)
T 3s40_A 173 RTV 175 (304)
T ss_dssp ---
T ss_pred HHH
Confidence 875
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=99.95 E-value=2.6e-28 Score=235.66 Aligned_cols=169 Identities=20% Similarity=0.188 Sum_probs=125.5
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
+++++||+||.||++++.+.++++++.|.+.+ +++.. ..|+..+++.++++++. ..+.+.||++|||||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g-~~~~~-----~~t~~~~~a~~~~~~~~-----~~~~d~vvv~GGDGT 92 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAG-YETSA-----YATEKIGDATLEAERAM-----HENYDVLIAAGGDGT 92 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTT-EEEEE-----EECCSTTHHHHHHHHHT-----TTTCSEEEEEECHHH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcC-CeEEE-----EEecCcchHHHHHHHHh-----hcCCCEEEEEcCchH
Confidence 56899999999999998888999999998764 34433 23556678888876542 245789999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeEEEEEecCCCCc
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~~~v~v~~~~g~~ 239 (344)
|+||+|+|+.. ..++|||+||+||+||||++||++ .++.++++ .|.+|+.+++|+|++
T Consensus 93 v~~v~~~l~~~-----~~~~pl~iIP~GT~N~lAr~Lg~~----~~~~~al~----~i~~g~~~~iD~g~v--------- 150 (337)
T 2qv7_A 93 LNEVVNGIAEK-----PNRPKLGVIPMGTVNDFGRALHIP----NDIMGALD----VIIEGHSTKVDIGKM--------- 150 (337)
T ss_dssp HHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTCC----SSHHHHHH----HHHHTCEEEEEEEEE---------
T ss_pred HHHHHHHHHhC-----CCCCcEEEecCCcHhHHHHHcCCC----CCHHHHHH----HHHcCCcEEEEEEEE---------
Confidence 99999999652 367999999999999999999985 45655544 466799999999974
Q ss_pred cCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhHhhhhhccCCcccccccCcceeeeecccce
Q 019227 240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQ 319 (344)
Q Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~f~N~~siGfDA~V~~~f~~~R~~~p~~~~~~~~NK~~Y~~~~~~~ 319 (344)
.+++|+|++++||||+|+..++..++ +..+++.|...++++
T Consensus 151 -------------------------------~~r~fl~~~~~G~~a~v~~~~~~~~k--------~~~G~~~Y~~~~l~~ 191 (337)
T 2qv7_A 151 -------------------------------NNRYFINLAAGGQLTQVSYETPSKLK--------SIVGPFAYYIKGFEM 191 (337)
T ss_dssp -------------------------------TTEEESSEEEEECBCC---------------------CGGGSCCCTTTT
T ss_pred -------------------------------CCEEEEEEeeecccHHHHHHhhHHHH--------hccChHHHHHHHHHH
Confidence 13689999999999999998876542 334777888777776
Q ss_pred e
Q 019227 320 G 320 (344)
Q Consensus 320 ~ 320 (344)
+
T Consensus 192 l 192 (337)
T 2qv7_A 192 L 192 (337)
T ss_dssp G
T ss_pred H
Confidence 4
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=99.94 E-value=2.9e-27 Score=228.17 Aligned_cols=171 Identities=19% Similarity=0.211 Sum_probs=121.4
Q ss_pred CCCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 019227 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (344)
Q Consensus 78 ~~~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGD 157 (344)
..+++++||+||.||++ +.++++.+.|.+.+. ++.. ..|.+.+++.++++++. ..+.|.||++|||
T Consensus 27 ~~~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~-~~~~-----~~t~~~~~~~~~~~~~~-----~~~~d~vvv~GGD 92 (332)
T 2bon_A 27 AEFPASLLILNGKSTDN---LPLREAIMLLREEGM-TIHV-----RVTWEKGDAARYVEEAR-----KFGVATVIAGGGD 92 (332)
T ss_dssp ---CCEEEEECSSSTTC---HHHHHHHHHHHTTTC-CEEE-----EECCSTTHHHHHHHHHH-----HHTCSEEEEEESH
T ss_pred hhcceEEEEECCCCCCC---chHHHHHHHHHHcCC-cEEE-----EEecCcchHHHHHHHHH-----hcCCCEEEEEccc
Confidence 34688999999999987 567788888876543 3332 23445677877776532 2357899999999
Q ss_pred hHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeEEEEEecCCC
Q 019227 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSG 237 (344)
Q Consensus 158 GTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~~~v~v~~~~g 237 (344)
|||+||+++|.... ...++|||+||+||+||||++|+|+ .++.++++ .+.+|+.+++|+|++.
T Consensus 93 GTl~~v~~~l~~~~---~~~~~plgiiP~Gt~N~fa~~l~i~----~~~~~al~----~i~~g~~~~iDlg~v~------ 155 (332)
T 2bon_A 93 GTINEVSTALIQCE---GDDIPALGILPLGTANDFATSVGIP----EALDKALK----LAIAGDAIAIDMAQVN------ 155 (332)
T ss_dssp HHHHHHHHHHHHCC---SSCCCEEEEEECSSSCHHHHHTTCC----SSHHHHHH----HHHHSEEEEEEEEEET------
T ss_pred hHHHHHHHHHhhcc---cCCCCeEEEecCcCHHHHHHhcCCC----CCHHHHHH----HHHcCCeEEeeEEEEC------
Confidence 99999999998531 1357899999999999999999985 35655544 4667999999999741
Q ss_pred CccCCCCCCCCCccccccccccccCCCCcccccccc-eEEEEeecchhHHHHhHhhhhhccCCcccccccCcceeeeecc
Q 019227 238 EVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYS 316 (344)
Q Consensus 238 ~~~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~-~f~N~~siGfDA~V~~~f~~~R~~~p~~~~~~~~NK~~Y~~~~ 316 (344)
++ +|+|++|+||||+|++.++..++ ++.+++.|...+
T Consensus 156 ----------------------------------~r~~fl~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~~ 193 (332)
T 2bon_A 156 ----------------------------------KQTCFINMATGGFGTRITTETPEKLK--------AALGSVSYIIHG 193 (332)
T ss_dssp ----------------------------------TSCEESSEEEEEEEEEC------------------CCHHHHHHHHH
T ss_pred ----------------------------------CceEEEEEEeECccHHHHHHhhHHhH--------hcccHHHHHHHH
Confidence 24 89999999999999987764332 233777888777
Q ss_pred cceee
Q 019227 317 CTQGW 321 (344)
Q Consensus 317 ~~~~~ 321 (344)
+++++
T Consensus 194 l~~l~ 198 (332)
T 2bon_A 194 LMRMD 198 (332)
T ss_dssp TSCEE
T ss_pred HHHHh
Confidence 77653
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=98.86 E-value=9.4e-09 Score=96.67 Aligned_cols=123 Identities=14% Similarity=0.047 Sum_probs=71.3
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhc-cc--hhhhccCCCcEEEEEcC
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAEL-GD--FCAKDTRQKMRIVVAGG 156 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~-~~--~~~~~~~~~~~IVv~GG 156 (344)
++++++|+||.++. ..+.++++.+.|.+.+ +++..... .+..+... .. .......+.|.||++||
T Consensus 5 mkki~ii~np~~~~--~~~~~~~i~~~l~~~g-~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~D~vi~~GG 72 (292)
T 2an1_A 5 FKCIGIVGHPRHPT--ALTTHEMLYRWLCDQG-YEVIVEQQ---------IAHELQLKNVPTGTLAEIGQQADLAVVVGG 72 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHTT-CEEEEEHH---------HHHHTTCSSCCEECHHHHHHHCSEEEECSC
T ss_pred CcEEEEEEcCCCHH--HHHHHHHHHHHHHHCC-CEEEEecc---------hhhhcccccccccchhhcccCCCEEEEEcC
Confidence 68899999998643 4467788888887654 44433110 01110000 00 00000124689999999
Q ss_pred chHHHHHHHHHhhcccCCCCCCCc-EEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeEEEEE
Q 019227 157 DGTVGWVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (344)
Q Consensus 157 DGTv~eVln~L~~~~~~~~~~~~p-lgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~~~v~v 232 (344)
|||++++++.+... ++| ||| |+||.|+|++ ++ |.++.+++ +.+.+|+.+--+...+.+
T Consensus 73 DGT~l~a~~~~~~~-------~~P~lGI-~~Gt~gfla~-~~-----~~~~~~al----~~i~~g~~~~~~r~~l~~ 131 (292)
T 2an1_A 73 DGNMLGAARTLARY-------DINVIGI-NRGNLGFLTD-LD-----PDNALQQL----SDVLEGRYISEKRFLLEA 131 (292)
T ss_dssp HHHHHHHHHHHTTS-------SCEEEEB-CSSSCCSSCC-BC-----TTSHHHHH----HHHHTTCEEEEEEEEEEE
T ss_pred cHHHHHHHHHhhcC-------CCCEEEE-ECCCcccCCc-CC-----HHHHHHHH----HHHHcCCCEEEEeEEEEE
Confidence 99999999999752 345 676 8999888886 34 33455554 456778876555555544
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=98.73 E-value=1.3e-08 Score=94.36 Aligned_cols=107 Identities=21% Similarity=0.225 Sum_probs=70.2
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv 160 (344)
+++++|+||.+|.+ +.++.+++.+.|. .+++. + . + +. ...+.|.||++|||||+
T Consensus 1 mki~ii~Np~~~~~-~~~~~~~i~~~l~---~~~~~--------~-~--~-----~~------~~~~~D~vv~~GGDGTl 54 (258)
T 1yt5_A 1 MKIAILYREEREKE-GEFLKEKISKEHE---VIEFG--------E-A--N-----AP------GRVTADLIVVVGGDGTV 54 (258)
T ss_dssp CEEEEEECGGGHHH-HHHHHHHHTTTSE---EEEEE--------E-S--S-----SC------SCBCCSEEEEEECHHHH
T ss_pred CEEEEEEeCCCchH-HHHHHHHHHHHhc---CCcee--------c-c--c-----cc------ccCCCCEEEEEeCcHHH
Confidence 36899999999976 6667777766664 23321 1 1 1 11 12457999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCc-EEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeEEEEE
Q 019227 161 GWVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (344)
Q Consensus 161 ~eVln~L~~~~~~~~~~~~p-lgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~~~v~v 232 (344)
+++++.+.. .+| +|| ++||.+.|+ .+. |.++.++ ++.+.+|+.+--+...+.+
T Consensus 55 l~~a~~~~~--------~~PilGI-n~G~~Gfl~-~~~-----~~~~~~a----l~~i~~g~~~i~~r~~l~~ 108 (258)
T 1yt5_A 55 LKAAKKAAD--------GTPMVGF-KAGRLGFLT-SYT-----LDEIDRF----LEDLRNWNFREETRWFIQI 108 (258)
T ss_dssp HHHHTTBCT--------TCEEEEE-ESSSCCSSC-CBC-----GGGHHHH----HHHHHTTCCEEEEEEEEEE
T ss_pred HHHHHHhCC--------CCCEEEE-ECCCCCccC-cCC-----HHHHHHH----HHHHHcCCceEEEEEEEEE
Confidence 999987752 345 777 599996666 454 3455444 4556778776444555444
No 6
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=98.71 E-value=5.2e-08 Score=91.07 Aligned_cols=104 Identities=12% Similarity=0.101 Sum_probs=69.9
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv 160 (344)
+++.+|+||. .++.+.++++...|.+.+ +++. ..+.|.||++|||||+
T Consensus 1 mki~ii~n~~---~~~~~~~~~l~~~l~~~g-~~v~----------------------------~~~~D~vv~lGGDGT~ 48 (272)
T 2i2c_A 1 MKYMITSKGD---EKSDLLRLNMIAGFGEYD-MEYD----------------------------DVEPEIVISIGGDGTF 48 (272)
T ss_dssp CEEEEEECCS---HHHHHHHHHHHHHHTTSS-CEEC----------------------------SSSCSEEEEEESHHHH
T ss_pred CEEEEEECCC---HHHHHHHHHHHHHHHHCC-CEeC----------------------------CCCCCEEEEEcCcHHH
Confidence 4689999973 345567788888887643 3320 1346899999999999
Q ss_pred HHHHHHHhhcccCCCCCCCc-EEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeEEEEE
Q 019227 161 GWVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (344)
Q Consensus 161 ~eVln~L~~~~~~~~~~~~p-lgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~~~v~v 232 (344)
.++++.+... ..++| +|| |+|| |+|...+. |.++.+ +++.+.+|+.+.-+...+.+
T Consensus 49 l~aa~~~~~~-----~~~~PilGI-n~G~-lgfl~~~~-----~~~~~~----~l~~l~~g~~~i~~r~~L~~ 105 (272)
T 2i2c_A 49 LSAFHQYEER-----LDEIAFIGI-HTGH-LGFYADWR-----PAEADK----LVKLLAKGEYQKVSYPLLKT 105 (272)
T ss_dssp HHHHHHTGGG-----TTTCEEEEE-ESSS-CCSSCCBC-----GGGHHH----HHHHHHTTCCEEEEEEEEEE
T ss_pred HHHHHHHhhc-----CCCCCEEEE-eCCC-CCcCCcCC-----HHHHHH----HHHHHHcCCCEEEEEEEEEE
Confidence 9999988642 12567 666 9999 66777775 334444 45557778766555555443
No 7
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=98.69 E-value=5.1e-08 Score=92.66 Aligned_cols=128 Identities=14% Similarity=0.154 Sum_probs=73.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccc-ee---ecch------h-HHHHHHhccchhhhccCCC
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHE-FV---QYGL------A-CLEKLAELGDFCAKDTRQK 148 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~-~~---t~~~------g-~a~~la~~~~~~~~~~~~~ 148 (344)
++++++|+||.++. ..+.++++.+.|.+++ +++....... .. .... + +...+.+.. ....+.
T Consensus 4 m~ki~iI~n~~~~~--~~~~~~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~ 76 (307)
T 1u0t_A 4 HRSVLLVVHTGRDE--ATETARRVEKVLGDNK-IALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQ----HAADGC 76 (307)
T ss_dssp -CEEEEEESSSGGG--GSHHHHHHHHHHHTTT-CEEEEEC---------------------------------------C
T ss_pred CCEEEEEEeCCCHH--HHHHHHHHHHHHHHCC-CEEEEecchhhhhhccccccccccccccccccccccc----ccccCC
Confidence 67899999999864 3467788888888754 3433321110 00 0000 0 111111100 012456
Q ss_pred cEEEEEcCchHHHHHHHHHhhcccCCCCCCCc-EEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeee
Q 019227 149 MRIVVAGGDGTVGWVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDS 227 (344)
Q Consensus 149 ~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~p-lgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~ 227 (344)
|.||++|||||++++++.+... ++| +|| ++||.|.|+. +. |.++.+++ +.+.+|+.+.-+.
T Consensus 77 d~vi~~GGDGT~l~a~~~~~~~-------~~pvlgi-~~G~~gfl~~-~~-----~~~~~~~~----~~i~~g~~~~~~r 138 (307)
T 1u0t_A 77 ELVLVLGGDGTFLRAAELARNA-------SIPVLGV-NLGRIGFLAE-AE-----AEAIDAVL----EHVVAQDYRVEDR 138 (307)
T ss_dssp CCEEEEECHHHHHHHHHHHHHH-------TCCEEEE-ECSSCCSSCS-EE-----GGGHHHHH----HHHHHTCCEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHhccC-------CCCEEEE-eCCCCccCcc-cC-----HHHHHHHH----HHHHcCCcEEEEE
Confidence 8999999999999999998763 345 664 8999999884 42 33555554 4466687766555
Q ss_pred EEEEE
Q 019227 228 WHAVI 232 (344)
Q Consensus 228 ~~v~v 232 (344)
..+.+
T Consensus 139 ~~l~~ 143 (307)
T 1u0t_A 139 LTLDV 143 (307)
T ss_dssp CCEEE
T ss_pred EEEEE
Confidence 55443
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.00016 Score=70.86 Aligned_cols=127 Identities=17% Similarity=0.135 Sum_probs=72.5
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcC-eeEEeeecccceeecchhHHHHHHhcc----------c------hh
Q 019227 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQ-VFDLSEVKPHEFVQYGLACLEKLAELG----------D------FC 141 (344)
Q Consensus 79 ~~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~-~~~l~~~~~~~~~t~~~g~a~~la~~~----------~------~~ 141 (344)
++++++||.||.. ....+...++...|.+.. .+++... + ..+..+.... . ..
T Consensus 40 ~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve-~--------~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 108 (388)
T 3afo_A 40 PLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQ-P--------DVAEEISQDFKSPLENDPNRPHILYTGPE 108 (388)
T ss_dssp CCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECC-H--------HHHHHHHTTCCSCGGGCTTSCEEEEECCH
T ss_pred CCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEe-C--------chhhhhhhhccccccccccccccccccch
Confidence 4789999999874 334556777777776651 2343221 0 1112221110 0 00
Q ss_pred hhccCCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCC-cEEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcC
Q 019227 142 AKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVP-PVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAG 220 (344)
Q Consensus 142 ~~~~~~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~-plgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g 220 (344)
.....+.|.||++|||||+..++..+.. ..+ |+--|++||.+-|+ .+.. .+ ++.+++.+.+|
T Consensus 109 ~~~~~~~DlVIvlGGDGTlL~aa~~~~~-------~~vpPiLGIN~G~lGFLt-~~~~-----~~----~~~al~~il~g 171 (388)
T 3afo_A 109 QDIVNRTDLLVTLGGDGTILHGVSMFGN-------TQVPPVLAFALGTLGFLS-PFDF-----KE----HKKVFQEVISS 171 (388)
T ss_dssp HHHHHHCSEEEEEESHHHHHHHHHTTTT-------SCCCCEEEEECSSCCSSC-CEEG-----GG----HHHHHHHHHTT
T ss_pred hhcccCCCEEEEEeCcHHHHHHHHHhcc-------cCCCeEEEEECCCcccCC-cCCh-----HH----HHHHHHHHhcC
Confidence 0001245899999999999999987653 233 44444999885554 3432 23 34455567788
Q ss_pred CeeEeeeEEEEEe
Q 019227 221 PICRLDSWHAVIQ 233 (344)
Q Consensus 221 ~~~~iD~~~v~v~ 233 (344)
+......-.+.+.
T Consensus 172 ~~~~~~r~~L~~~ 184 (388)
T 3afo_A 172 RAKCLHRTRLECH 184 (388)
T ss_dssp CCEEEEECCEEEE
T ss_pred CceEEEeeEEEEE
Confidence 8766555555543
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=96.26 E-value=0.016 Score=54.11 Aligned_cols=93 Identities=20% Similarity=0.310 Sum_probs=56.5
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv 160 (344)
+++.+|.|+..- .+++.+.|.+.+ +++...... ++ .....|.||+.|||||+
T Consensus 30 mki~iv~~~~~~-------~~~l~~~L~~~g-~~v~~~~~~-------------~~-------~~~~~DlvIvlGGDGT~ 81 (278)
T 1z0s_A 30 MRAAVVYKTDGH-------VKRIEEALKRLE-VEVELFNQP-------------SE-------ELENFDFIVSVGGDGTI 81 (278)
T ss_dssp CEEEEEESSSTT-------HHHHHHHHHHTT-CEEEEESSC-------------CG-------GGGGSSEEEEEECHHHH
T ss_pred eEEEEEeCCcHH-------HHHHHHHHHHCC-CEEEEcccc-------------cc-------ccCCCCEEEEECCCHHH
Confidence 469999998654 556677777654 344321100 00 12356899999999999
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHH
Q 019227 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQ 215 (344)
Q Consensus 161 ~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~ 215 (344)
-.++..+.. . +|+--|.+||-+=|+. +. +.+..++++++++
T Consensus 82 L~aa~~~~~-------~-~PilGIN~G~lGFLt~-~~-----~~~~~~~l~~l~~ 122 (278)
T 1z0s_A 82 LRILQKLKR-------C-PPIFGINTGRVGLLTH-AS-----PENFEVELKKAVE 122 (278)
T ss_dssp HHHHTTCSS-------C-CCEEEEECSSSCTTCC-BB-----TTBCHHHHHHHHH
T ss_pred HHHHHHhCC-------C-CcEEEECCCCCccccc-cC-----HHHHHHHHHHHHh
Confidence 888754331 3 7877778886554442 21 3455666666554
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=94.16 E-value=0.092 Score=50.78 Aligned_cols=70 Identities=26% Similarity=0.382 Sum_probs=43.0
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEe
Q 019227 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRL 225 (344)
Q Consensus 146 ~~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~i 225 (344)
...|.||+.|||||+-.++..+.. ..+|+--|-+| +||+=..++.+ .++..++.+.+|....-
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~-------~~~PvlGiN~G-------~LGFLt~~~~~---~~~~~l~~vl~g~~~v~ 169 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQG-------SVPPVMAFHLG-------SLGFLTPFSFE---NFQSQVTQVIEGNAAVV 169 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSS-------SCCCEEEEESS-------SCTTTCCEEST---THHHHHHHHHHSCCBEE
T ss_pred cCCCEEEEEcChHHHHHHHHHhcc-------CCCCEEEEcCC-------CCccceeecHH---HHHHHHHHHHcCCCeEE
Confidence 456899999999999999876543 45675555555 45553332221 23445555667876655
Q ss_pred eeEEEEE
Q 019227 226 DSWHAVI 232 (344)
Q Consensus 226 D~~~v~v 232 (344)
..-++.+
T Consensus 170 ~R~~L~~ 176 (365)
T 3pfn_A 170 LRSRLKV 176 (365)
T ss_dssp EECCEEE
T ss_pred EEeeEEE
Confidence 5444444
No 11
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=80.26 E-value=4.2 Score=38.79 Aligned_cols=86 Identities=15% Similarity=0.151 Sum_probs=51.7
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
.++++||..+.. ..+.+++...|....+..+..+.+.. .....++.++.+. ..+.|.||++|| |+
T Consensus 36 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs 100 (358)
T 3jzd_A 36 AKRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHV----PIESARDATARAR-----EAGADCAVAVGG-GS 100 (358)
T ss_dssp CSCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTC----BHHHHHHHHHHHH-----HHTCSEEEEEES-HH
T ss_pred CCeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCC----CHHHHHHHHHHhh-----ccCCCEEEEeCC-cH
Confidence 467888887642 23567888888764321122222211 1123344433321 135689999999 89
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
+..+.-.+... ..+|+..||.
T Consensus 101 viD~aK~iA~~------~~~p~i~IPT 121 (358)
T 3jzd_A 101 TTGLGKAIALE------TGMPIVAIPT 121 (358)
T ss_dssp HHHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEeC
Confidence 99888777643 4579999996
No 12
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=79.87 E-value=5 Score=38.15 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=51.8
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
.++++||..+.. ..+.+++...|.+..+.-+..+.+.. ......++++.+. ..+.|.||++|| |+
T Consensus 34 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~v~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs 98 (353)
T 3hl0_A 34 LSRALVLSTPQQ-----KGDAEALASRLGRLAAGVFSEAAMHT----PVEVTKTAVEAYR-----AAGADCVVSLGG-GS 98 (353)
T ss_dssp CCCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTC----BHHHHHHHHHHHH-----HTTCSEEEEEES-HH
T ss_pred CCEEEEEecCch-----hhHHHHHHHHHhhCCcEEecCcCCCC----cHHHHHHHHHHHh-----ccCCCEEEEeCC-cH
Confidence 467888887642 23567888888764321111122221 1123444443321 235689999999 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
+..+.-.+... ..+|+..||.
T Consensus 99 ~iD~aK~iA~~------~~~p~i~IPT 119 (353)
T 3hl0_A 99 TTGLGKAIALR------TDAAQIVIPT 119 (353)
T ss_dssp HHHHHHHHHHH------HCCEEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEeC
Confidence 99888777543 4689999996
No 13
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=76.11 E-value=22 Score=30.24 Aligned_cols=76 Identities=13% Similarity=0.187 Sum_probs=48.0
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 019227 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (344)
Q Consensus 82 ~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv 160 (344)
++.||. |+..-....++....|+..++ |++.+...+. .+....++++++.+ ..-.-.|.++||.+-+
T Consensus 5 ~V~Iim----gs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 72 (163)
T 3ors_A 5 KVAVIM----GSSSDWKIMQESCNMLDYFEIPYEKQVVSAHR----TPKMMVQFASEARE----RGINIIIAGAGGAAHL 72 (163)
T ss_dssp CEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTTT----TTCCEEEEEEESSCCH
T ss_pred eEEEEE----CcHHHHHHHHHHHHHHHHcCCCEEEEEECCcC----CHHHHHHHHHHHHh----CCCcEEEEECCchhhh
Confidence 455554 322223456777777777765 8887765432 34567777765421 1112467788999999
Q ss_pred HHHHHHHhh
Q 019227 161 GWVLGSVGE 169 (344)
Q Consensus 161 ~eVln~L~~ 169 (344)
--++.++..
T Consensus 73 pgvvA~~t~ 81 (163)
T 3ors_A 73 PGMVASLTT 81 (163)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHhccC
Confidence 999998863
No 14
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=72.43 E-value=13 Score=36.02 Aligned_cols=96 Identities=16% Similarity=0.199 Sum_probs=55.1
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 019227 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (344)
Q Consensus 79 ~~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGD 157 (344)
..++++||.++... +...+++...|.+.+. +.+......+. ........++.+.+.+ ...++.+.||++||
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~-~kt~~~v~~~~~~l~~--~~~~R~d~IIAvGG- 132 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQ-YKTLETFNTVMSFLLE--HNYSRDVVVIALGG- 132 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGG-GCBHHHHHHHHHHHHH--TTCCTTCEEEEEES-
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcC-CchHHHHHHHHHHHHh--cCCCcCcEEEEECC-
Confidence 45789999998654 3366788888876542 22211111110 1122334444443221 11334578999988
Q ss_pred hHHHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 158 GTv~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
|++..+...+.... ...+|+..||.
T Consensus 133 Gsv~D~ak~~Aa~~----~rgip~I~IPT 157 (390)
T 3okf_A 133 GVIGDLVGFAAACY----QRGVDFIQIPT 157 (390)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred cHHhhHHHHHHHHh----cCCCCEEEeCC
Confidence 88888887664321 25689999997
No 15
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=70.91 E-value=29 Score=29.76 Aligned_cols=76 Identities=18% Similarity=0.156 Sum_probs=49.5
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCC-cEEEEEcCch
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAGGDG 158 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~-~~IVv~GGDG 158 (344)
.++.||.=..| -..+.++....|++.++ |++.+...+. .+....++++++. .+.. -.|.++||.|
T Consensus 13 P~V~IimGS~S----D~~v~~~a~~~l~~~gi~~ev~V~saHR----~p~~l~~~~~~a~-----~~g~~ViIa~AG~aa 79 (173)
T 4grd_A 13 PLVGVLMGSSS----DWDVMKHAVAILQEFGVPYEAKVVSAHR----MPDEMFDYAEKAR-----ERGLRAIIAGAGGAA 79 (173)
T ss_dssp CSEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHHT-----TTTCSEEEEEEESSC
T ss_pred CeEEEEeCcHh----HHHHHHHHHHHHHHcCCCEEEEEEcccc----CHHHHHHHHHHHH-----hcCCeEEEEeccccc
Confidence 35777764333 23456777777877776 8887765432 3455677776542 1223 3567889999
Q ss_pred HHHHHHHHHhh
Q 019227 159 TVGWVLGSVGE 169 (344)
Q Consensus 159 Tv~eVln~L~~ 169 (344)
-+--++.++..
T Consensus 80 hLpgvvA~~t~ 90 (173)
T 4grd_A 80 HLPGMLAAKTT 90 (173)
T ss_dssp CHHHHHHHHCC
T ss_pred cchhhheecCC
Confidence 99999998863
No 16
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=70.29 E-value=29 Score=29.79 Aligned_cols=76 Identities=13% Similarity=0.098 Sum_probs=49.0
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 019227 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (344)
Q Consensus 82 ~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv 160 (344)
++.||.=..| -..+.++....|+..++ |++.+...+. .+....++++++.+ ..-.-.|.++|+.+-+
T Consensus 9 ~V~IimgS~S----D~~v~~~a~~~L~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 76 (174)
T 3lp6_A 9 RVGVIMGSDS----DWPVMADAAAALAEFDIPAEVRVVSAHR----TPEAMFSYARGAAA----RGLEVIIAGAGGAAHL 76 (174)
T ss_dssp SEEEEESCGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHHHH----HTCCEEEEEEESSCCH
T ss_pred eEEEEECcHH----hHHHHHHHHHHHHHcCCCEEEEEECCCC----CHHHHHHHHHHHHh----CCCCEEEEecCchhhh
Confidence 4666653332 23456777777877765 8887765432 34567777765421 1123467788999999
Q ss_pred HHHHHHHhh
Q 019227 161 GWVLGSVGE 169 (344)
Q Consensus 161 ~eVln~L~~ 169 (344)
--++.++..
T Consensus 77 pgvvA~~t~ 85 (174)
T 3lp6_A 77 PGMVAAATP 85 (174)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHhccC
Confidence 999998863
No 17
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=68.90 E-value=9.8 Score=36.52 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=56.9
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhc------CeeEE--eeecccceeecchhHHHHHHhccchhhhc--cCCCc
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKE------QVFDL--SEVKPHEFVQYGLACLEKLAELGDFCAKD--TRQKM 149 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~------~~~~l--~~~~~~~~~t~~~g~a~~la~~~~~~~~~--~~~~~ 149 (344)
.++++||.++... +...+++...|... + +.+ ....+.+. +.......++.+.+.+ .. ..+.+
T Consensus 36 ~~k~liVtd~~v~----~~~~~~v~~~L~~~~~~~~~g-~~~~~~~~~~gE~-~k~~~~v~~~~~~~~~--~~~~~~r~d 107 (393)
T 1sg6_A 36 STTYVLVTDTNIG----SIYTPSFEEAFRKRAAEITPS-PRLLIYNRPPGEV-SKSRQTKADIEDWMLS--QNPPCGRDT 107 (393)
T ss_dssp CSEEEEEEEHHHH----HHHHHHHHHHHHHHHHHSSSC-CEEEEEEECSSGG-GSSHHHHHHHHHHHHT--SSSCCCTTC
T ss_pred CCeEEEEECCcHH----HHHHHHHHHHHHhhhccccCC-ceeEEEEeCCCCC-CCCHHHHHHHHHHHHH--cCCCCCCCC
Confidence 4689999886432 22556777777543 2 222 12222110 1112334444443211 11 23448
Q ss_pred EEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeec--CCccchh
Q 019227 150 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (344)
Q Consensus 150 ~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~--GTgNDfA 193 (344)
.||++|| |++..+...+.... ...+|+..||. ||+.|-+
T Consensus 108 ~iIalGG-Gsv~D~ak~~Aa~~----~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 108 VVIALGG-GVIGDLTGFVASTY----MRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp EEEEEES-HHHHHHHHHHHHHG----GGCCEEEEEECSHHHHHTTT
T ss_pred EEEEECC-cHHHHHHHHHHHHh----cCCCCEEEECCchhhhhhcC
Confidence 8998988 78888877665321 14689999998 8888874
No 18
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=68.21 E-value=5.6 Score=37.98 Aligned_cols=84 Identities=17% Similarity=0.231 Sum_probs=49.4
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
.++++||..+.. ..+.+++...|.. .+.+..+.+.. .....++.++.+. ..+.|.||++|| |+
T Consensus 37 ~~rvliVtd~~~-----~~~~~~v~~~L~~--~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs 99 (364)
T 3iv7_A 37 SAKVMVIAGERE-----MSIAHKVASEIEV--AIWHDEVVMHV----PIEVAERARAVAT-----DNEIDLLVCVGG-GS 99 (364)
T ss_dssp CSSEEEECCGGG-----HHHHHHHTTTSCC--SEEECCCCTTC----BHHHHHHHHHHHH-----HTTCCEEEEEES-HH
T ss_pred CCEEEEEECCCH-----HHHHHHHHHHcCC--CEEEcceecCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-cH
Confidence 367888877642 2345666666653 22222222221 1123444443321 245689999999 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
+..+.-.+... ..+|+..||.
T Consensus 100 ~iD~aK~iA~~------~~~P~i~IPT 120 (364)
T 3iv7_A 100 TIGLAKAIAMT------TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEcC
Confidence 88888777543 4689999996
No 19
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=67.31 E-value=9.2 Score=36.77 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=48.2
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
++++||..+..- +...+++...|.+ +. +.+....+... .....++++.+. ..+.|.||++|| |+
T Consensus 53 ~r~liVtd~~~~----~~~~~~v~~~L~~-g~~~~~~~~~~~p~----~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 117 (387)
T 3uhj_A 53 KRALVLIDRVLF----DALSERIGKSCGD-SLDIRFERFGGECC----TSEIERVRKVAI-----EHGSDILVGVGG-GK 117 (387)
T ss_dssp SEEEEEECTTTH----HHHHHHC-------CCEEEEEECCSSCS----HHHHHHHHHHHH-----HHTCSEEEEESS-HH
T ss_pred CEEEEEECchHH----HHHHHHHHHHHHc-CCCeEEEEcCCCCC----HHHHHHHHHHHh-----hcCCCEEEEeCC-cH
Confidence 789999887653 2356777778876 43 22222222211 133444443321 135689999999 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
+..+.-.+.-. ..+|+..||.
T Consensus 118 ~~D~AK~iA~~------~~~p~i~IPT 138 (387)
T 3uhj_A 118 TADTAKIVAID------TGARIVIAPT 138 (387)
T ss_dssp HHHHHHHHHHH------TTCEEEECCS
T ss_pred HHHHHHHHHHh------cCCCEEEecC
Confidence 88888877643 4689999996
No 20
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=66.22 E-value=50 Score=31.11 Aligned_cols=101 Identities=22% Similarity=0.268 Sum_probs=56.4
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~-~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDG 158 (344)
++++||..+.+-... .+.+++...|.+.+. + .+..+.+.. ......++++.+. ..+.|.||++|| |
T Consensus 41 ~~~liVtd~~~~~~~--g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-G 108 (371)
T 1o2d_A 41 KRALVVTGKSSSKKN--GSLDDLKKLLDETEISYEIFDEVEENP----SFDNVMKAVERYR-----NDSFDFVVGLGG-G 108 (371)
T ss_dssp SEEEEEEESSGGGTS--SHHHHHHHHHHHTTCEEEEEEEECSSC----BHHHHHHHHHHHT-----TSCCSEEEEEES-H
T ss_pred CEEEEEECchHHhhc--cHHHHHHHHHHHcCCeEEEeCCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-h
Confidence 789999987543322 256777777765432 2 122222221 1233445444331 235689999988 7
Q ss_pred HHHHHHHHHhhcccC------------CCCCCCcEEEeec--CCccchh
Q 019227 159 TVGWVLGSVGELNKQ------------GREPVPPVAIIPL--GTGNDLS 193 (344)
Q Consensus 159 Tv~eVln~L~~~~~~------------~~~~~~plgIIP~--GTgNDfA 193 (344)
++..+.-.+...... .....+|+..||. |||-...
T Consensus 109 sv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~t 157 (371)
T 1o2d_A 109 SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVT 157 (371)
T ss_dssp HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhhc
Confidence 777777665442100 0015789999995 6665444
No 21
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=65.31 E-value=22 Score=33.97 Aligned_cols=93 Identities=17% Similarity=0.119 Sum_probs=52.6
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
++++||.++..- +..+++...|.+.+. +.+......+ .........++.+.+.+ ....+.+.||++|| |+
T Consensus 44 ~rvlIVtd~~v~-----~~~~~v~~~L~~~g~~~~~~~~~~gE-~~kt~~~v~~~~~~l~~--~~~~r~d~IIavGG-Gs 114 (368)
T 3qbe_A 44 HKVAVVHQPGLA-----ETAEEIRKRLAGKGVDAHRIEIPDAE-AGKDLPVVGFIWEVLGR--IGIGRKDALVSLGG-GA 114 (368)
T ss_dssp SEEEEEECGGGH-----HHHHHHHHHHHHTTCEEEEEECCSGG-GGGBHHHHHHHHHHHHH--HTCCTTCEEEEEES-HH
T ss_pred CEEEEEECccHH-----HHHHHHHHHHHhcCCcceEEEeCCCC-CCCCHHHHHHHHHHHHH--cCCCCCcEEEEECC-hH
Confidence 789999988653 236778888876542 2222111111 01112334444433211 11345689999998 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
+..+...+.... ...+|+..||.
T Consensus 115 v~D~ak~~Aa~~----~rgip~i~IPT 137 (368)
T 3qbe_A 115 ATDVAGFAAATW----LRGVSIVHLPT 137 (368)
T ss_dssp HHHHHHHHHHHG----GGCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCcEEEECC
Confidence 888887665321 14689999996
No 22
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=62.48 E-value=12 Score=35.53 Aligned_cols=95 Identities=18% Similarity=0.176 Sum_probs=53.6
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
.++++||.++.... ...+++...|...-.+........+ .........++.+.+.+ ...++.+.||++|| |+
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge-~~k~~~~v~~~~~~~~~--~~~~r~d~iIalGG-Gs 105 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGE-EYKTLSTVTNLQERAIA--LGANRRTAIVAVGG-GL 105 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSG-GGCSHHHHHHHHHHHHH--TTCCTTEEEEEEES-HH
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCC-CCCCHHHHHHHHHHHHh--cCCCCCcEEEEECC-hH
Confidence 47899999987642 2567788777653012111111111 11122334444332211 11245689999988 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
+..+...+.... ...+|+..||.
T Consensus 106 v~D~ak~~Aa~~----~rgip~i~IPT 128 (368)
T 2gru_A 106 TGNVAGVAAGMM----FRGIALIHVPT 128 (368)
T ss_dssp HHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHh----cCCCCEEEECC
Confidence 888887766421 24689999997
No 23
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=59.90 E-value=78 Score=27.23 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=50.3
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDG 158 (344)
..++.||.=..| -..+.++....|+..++ |++.+...+. .+....++++++.+ ..-.-.|.++||.+
T Consensus 21 ~~~V~IimGS~S----D~~v~~~a~~~L~~~Gi~~dv~V~SaHR----~p~~l~~~~~~a~~----~g~~ViIa~AG~aa 88 (182)
T 1u11_A 21 APVVGIIMGSQS----DWETMRHADALLTELEIPHETLIVSAHR----TPDRLADYARTAAE----RGLNVIIAGAGGAA 88 (182)
T ss_dssp CCSEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHTTT----TTCCEEEEEEESSC
T ss_pred CCEEEEEECcHH----HHHHHHHHHHHHHHcCCCeEEEEEcccC----CHHHHHHHHHHHHh----CCCcEEEEecCchh
Confidence 446777764433 23456677777777765 8888765432 34566777765421 11124677889999
Q ss_pred HHHHHHHHHhh
Q 019227 159 TVGWVLGSVGE 169 (344)
Q Consensus 159 Tv~eVln~L~~ 169 (344)
-+--|+.++..
T Consensus 89 ~LpgvvA~~t~ 99 (182)
T 1u11_A 89 HLPGMCAAWTR 99 (182)
T ss_dssp CHHHHHHHHCS
T ss_pred hhHHHHHhccC
Confidence 99999998863
No 24
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=59.57 E-value=54 Score=27.95 Aligned_cols=76 Identities=17% Similarity=0.180 Sum_probs=48.1
Q ss_pred hhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHHHHHHHHhhcccCCC
Q 019227 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGR 175 (344)
Q Consensus 97 ~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv~eVln~L~~~~~~~~ 175 (344)
....++....|+..++ |++.+..... .+....++++++.+ ..-.-.|.++||.+-+--++.++.
T Consensus 24 ~~v~~~a~~~L~~~Gi~~dv~V~SaHR----~p~~l~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t------- 88 (170)
T 1xmp_A 24 WETMKYACDILDELNIPYEKKVVSAHR----TPDYMFEYAETARE----RGLKVIIAGAGGAAHLPGMVAAKT------- 88 (170)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTTT----TTCCEEEEEEESSCCHHHHHHTTC-------
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEeccC----CHHHHHHHHHHHHh----CCCcEEEEECCchhhhHHHHHhcc-------
Confidence 3466777777877776 8887765432 34566777765421 111246778899999999998765
Q ss_pred CCCCcEEEeecCCc
Q 019227 176 EPVPPVAIIPLGTG 189 (344)
Q Consensus 176 ~~~~plgIIP~GTg 189 (344)
..|+--+|.-++
T Consensus 89 --~~PVIgVP~~~~ 100 (170)
T 1xmp_A 89 --NLPVIGVPVQSK 100 (170)
T ss_dssp --CSCEEEEEECCT
T ss_pred --CCCEEEeeCCCC
Confidence 345555555443
No 25
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=58.53 E-value=21 Score=34.29 Aligned_cols=101 Identities=13% Similarity=0.215 Sum_probs=53.4
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv 160 (344)
++++||..+.+-.. ..+.+++...|....++.+..+.+.. ......++++.+. ..+.|.||++|| |++
T Consensus 51 ~r~liVtd~~~~~~--~g~~~~v~~~L~g~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKK--TGVLDQVLDALKGMDVLEFGGIEPNP----AYETLMNAVKLVR-----EQKVTFLLAVGG-GSV 118 (408)
T ss_dssp CEEEEEECSSHHHH--HSHHHHHHHHTTTSEEEEECCCCSSC----BHHHHHHHHHHHH-----HHTCCEEEEEES-HHH
T ss_pred CEEEEEECCchhhh--ccHHHHHHHHhCCCEEEEeCCcCCCc----CHHHHHHHHHHHH-----HcCCCEEEEeCC-chH
Confidence 78888886543211 11567777777511111222122221 1223344443321 134589999998 778
Q ss_pred HHHHHHHhhccc---------------CCCCCCCcEEEeec--CCccchh
Q 019227 161 GWVLGSVGELNK---------------QGREPVPPVAIIPL--GTGNDLS 193 (344)
Q Consensus 161 ~eVln~L~~~~~---------------~~~~~~~plgIIP~--GTgNDfA 193 (344)
..+.-.+...-. ......+|+..||. |||-...
T Consensus 119 iD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt 168 (408)
T 1oj7_A 119 LDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESN 168 (408)
T ss_dssp HHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGS
T ss_pred HHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhC
Confidence 777766644210 01125689999996 6655544
No 26
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=57.68 E-value=37 Score=31.71 Aligned_cols=85 Identities=9% Similarity=0.103 Sum_probs=51.1
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
++++||..+..-. ...+++...|.+.+. +.+....|.. ......++ +.+. ..+.|.||++|| |+
T Consensus 35 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~~~~----~~~~v~~~-~~~~-----~~~~d~IIavGG-Gs 99 (354)
T 3ce9_A 35 KRVSLYFGEGIYE----LFGETIEKSIKSSNIEIEAVETVKNI----DFDEIGTN-AFKI-----PAEVDALIGIGG-GK 99 (354)
T ss_dssp SEEEEEEETTHHH----HHHHHHHHHHHTTTCEEEEEEEECCC----BHHHHHHH-HTTS-----CTTCCEEEEEES-HH
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHHcCCeEEEEecCCCC----CHHHHHHH-HHhh-----hcCCCEEEEECC-hH
Confidence 5899999875432 356778888865432 2211101221 12334444 4321 245689999988 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
+..+.-.+.-. ..+|+..||.
T Consensus 100 v~D~aK~vA~~------~~~p~i~IPT 120 (354)
T 3ce9_A 100 AIDAVKYMAFL------RKLPFISVPT 120 (354)
T ss_dssp HHHHHHHHHHH------HTCCEEEEES
T ss_pred HHHHHHHHHhh------cCCCEEEecC
Confidence 88888776532 3689999996
No 27
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=56.49 E-value=75 Score=27.15 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=48.3
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 019227 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (344)
Q Consensus 82 ~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv 160 (344)
++.||.=..| -..+.++....|+..++ |++.+...+. .+....++++++.+ ..-.-.|.++|+.+-+
T Consensus 14 ~V~IimGS~S----D~~v~~~a~~~L~~~Gi~~ev~V~SaHR----~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 81 (174)
T 3kuu_A 14 KIAIVMGSKS----DWATMQFAADVLTTLNVPFHVEVVSAHR----TPDRLFSFAEQAEA----NGLHVIIAGNGGAAHL 81 (174)
T ss_dssp CEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHTTT----TTCSEEEEEEESSCCH
T ss_pred cEEEEECcHH----HHHHHHHHHHHHHHcCCCEEEEEEcccC----CHHHHHHHHHHHHh----CCCcEEEEECChhhhh
Confidence 4666653332 23456777777877776 8887765432 34567777765421 1112467788999999
Q ss_pred HHHHHHHh
Q 019227 161 GWVLGSVG 168 (344)
Q Consensus 161 ~eVln~L~ 168 (344)
--++.++.
T Consensus 82 pgvvA~~t 89 (174)
T 3kuu_A 82 PGMLAAKT 89 (174)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcc
Confidence 99998875
No 28
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=56.28 E-value=64 Score=30.46 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=54.7
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~-~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGD 157 (344)
.++++||..+..-... ..+.+++...|.+.+. + .+..+.+.. ......++++.+. ..+.|.||++||
T Consensus 33 ~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG- 101 (387)
T 3bfj_A 33 GKKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNP----KDTNVRDGLAVFR-----REQCDIIVTVGG- 101 (387)
T ss_dssp CSEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCCEEEEEES-
T ss_pred CCEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-
Confidence 3689999887654320 0145667777765432 2 112122221 1233444444321 135689999988
Q ss_pred hHHHHHHHHHhhc---c---------cCCCCCCCcEEEeec--CCccchh
Q 019227 158 GTVGWVLGSVGEL---N---------KQGREPVPPVAIIPL--GTGNDLS 193 (344)
Q Consensus 158 GTv~eVln~L~~~---~---------~~~~~~~~plgIIP~--GTgNDfA 193 (344)
|++..+.-.+... + .......+|+..||. |||-...
T Consensus 102 Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt 151 (387)
T 3bfj_A 102 GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVT 151 (387)
T ss_dssp HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGGC
T ss_pred cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcccccc
Confidence 7777777665432 0 001125689999995 6655443
No 29
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=54.63 E-value=53 Score=27.60 Aligned_cols=61 Identities=16% Similarity=0.261 Sum_probs=41.9
Q ss_pred hhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHHHHHHHHh
Q 019227 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVG 168 (344)
Q Consensus 97 ~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv~eVln~L~ 168 (344)
..+.++....|+..++ |++.+...+. .+....++++++ +..-.|.++||.+-+--++.++.
T Consensus 12 ~~v~~~a~~~l~~~gi~~dv~V~saHR----~p~~~~~~~~~a-------~~~ViIa~AG~aa~Lpgvva~~t 73 (157)
T 2ywx_A 12 LKIAEKAVNILKEFGVEFEVRVASAHR----TPELVEEIVKNS-------KADVFIAIAGLAAHLPGVVASLT 73 (157)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHC-------CCSEEEEEEESSCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEcccC----CHHHHHHHHHhc-------CCCEEEEEcCchhhhHHHHHhcc
Confidence 3456677777877765 8888765432 345667777653 22446778999999999998765
No 30
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=53.93 E-value=17 Score=34.21 Aligned_cols=94 Identities=15% Similarity=0.143 Sum_probs=51.7
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
.++++||.++..... ..+++...|...++ .+......+ .........++.+.+.+ ...++.+.||++|| |+
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~~~-~~~~~~~~e-~~k~~~~v~~~~~~~~~--~~~~r~d~iIavGG-Gs 96 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKALEV-RVCVIESGE-KYKNFHSLERILNNAFE--MQLNRHSLMIALGG-GV 96 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECSCE-EEEEECSSG-GGCSHHHHHHHHHHHHH--TTCCTTCEEEEEES-HH
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhCCc-EEEEeCCCC-CCCCHHHHHHHHHHHHh--cCCCCCceEEEECC-hH
Confidence 478999998765432 45677777755432 222211111 01112334444443221 11344589999988 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
+..+...+.... ...+|+..||.
T Consensus 97 v~D~ak~~A~~~----~rgip~i~IPT 119 (343)
T 3clh_A 97 ISDMVGFASSIY----FRGIDFINIPT 119 (343)
T ss_dssp HHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCCEEEeCC
Confidence 888877665321 25689999994
No 31
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=51.69 E-value=63 Score=27.50 Aligned_cols=74 Identities=14% Similarity=0.116 Sum_probs=47.1
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchH
Q 019227 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGT 159 (344)
Q Consensus 82 ~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~-~~~IVv~GGDGT 159 (344)
++.||. |+..-..+.++....|+..++ |++.+...+. .+....++++++.+ +. .-.|.++|+.+-
T Consensus 8 ~V~Iim----gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~~-----~g~~ViIa~AG~aa~ 74 (169)
T 3trh_A 8 FVAILM----GSDSDLSTMETAFTELKSLGIPFEAHILSAHR----TPKETVEFVENADN-----RGCAVFIAAAGLAAH 74 (169)
T ss_dssp EEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHHHH-----TTEEEEEEEECSSCC
T ss_pred cEEEEE----CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccC----CHHHHHHHHHHHHh-----CCCcEEEEECChhhh
Confidence 355554 332233466777778877776 8887765432 34566777765421 22 246778899999
Q ss_pred HHHHHHHHh
Q 019227 160 VGWVLGSVG 168 (344)
Q Consensus 160 v~eVln~L~ 168 (344)
+--++.++.
T Consensus 75 LpgvvA~~t 83 (169)
T 3trh_A 75 LAGTIAAHT 83 (169)
T ss_dssp HHHHHHHTC
T ss_pred hHHHHHhcC
Confidence 999998875
No 32
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=51.39 E-value=27 Score=33.22 Aligned_cols=101 Identities=11% Similarity=0.207 Sum_probs=56.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~-~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGD 157 (344)
.++++||..+.-- ...+.+++...|.+.+. + .+..+.+.. .....+++++.+. ..+.|.||++||
T Consensus 31 ~~~~liVtd~~~~---~~g~~~~v~~~L~~~gi~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG- 97 (383)
T 3ox4_A 31 FKNALIVSDAFMN---KSGVVKQVADLLKAQGINSAVYDGVMPNP----TVTAVLEGLKILK-----DNNSDFVISLGG- 97 (383)
T ss_dssp CCEEEEEEEHHHH---HTTHHHHHHHHHHTTTCEEEEEEEECSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred CCEEEEEECCchh---hCchHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-
Confidence 4788888876321 11256788888876542 2 222222222 1233444443321 135689999999
Q ss_pred hHHHHHHHHHhhccc------------CCCCCCCcEEEeec--CCccchh
Q 019227 158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLS 193 (344)
Q Consensus 158 GTv~eVln~L~~~~~------------~~~~~~~plgIIP~--GTgNDfA 193 (344)
|++..+.-.+...-. ......+|+..||. |||-...
T Consensus 98 Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~t 147 (383)
T 3ox4_A 98 GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEMT 147 (383)
T ss_dssp HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTTC
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhcC
Confidence 888887766533210 01124689999996 5554433
No 33
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=50.89 E-value=28 Score=32.78 Aligned_cols=86 Identities=13% Similarity=0.117 Sum_probs=50.9
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
++++||..+..-. ...+++...|...+. +.+....... + .....++++.+. ..+.|.||++|| |+
T Consensus 32 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~ge~--~--~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 97 (370)
T 1jq5_A 32 NKTVVIADEIVWK----IAGHTIVNELKKGNIAAEEVVFSGEA--S--RNEVERIANIAR-----KAEAAIVIGVGG-GK 97 (370)
T ss_dssp SEEEEEECHHHHH----HTHHHHHHHHHTTTCEEEEEECCSSC--B--HHHHHHHHHHHH-----HTTCSEEEEEES-HH
T ss_pred CeEEEEEChHHHH----HHHHHHHHHHHHcCCeEEEEeeCCCC--C--HHHHHHHHHHHH-----hcCCCEEEEeCC-hH
Confidence 7899998775432 256777777865442 2222221111 1 123344443321 134689999998 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
+..+.-.+.-. ..+|+..||.
T Consensus 98 v~D~aK~iA~~------~~~p~i~IPT 118 (370)
T 1jq5_A 98 TLDTAKAVADE------LDAYIVIVPT 118 (370)
T ss_dssp HHHHHHHHHHH------HTCEEEEEES
T ss_pred HHHHHHHHHHh------cCCCEEEecc
Confidence 88888776542 3579999996
No 34
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=50.78 E-value=19 Score=33.87 Aligned_cols=39 Identities=28% Similarity=0.301 Sum_probs=31.3
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||..-+. .|.+ ..+|+--||-==-||+.
T Consensus 94 ~Id~LvvIGGdgS~~~a~-~L~~-------~~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 94 GIDALVVIGGDGSYMGAM-RLTE-------MGFPCIGLPGTIDNDIK 132 (320)
T ss_dssp TCCEEEEEECHHHHHHHH-HHHH-------TTCCEEEEEBCTTCCCT
T ss_pred CCCEEEEECCCchHHHHH-HHHh-------hCCCEEEEeccccCCCC
Confidence 457999999999987653 4443 36889999999999998
No 35
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=50.42 E-value=1e+02 Score=26.46 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=47.8
Q ss_pred CCCc-EEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCC-cEEEEEc
Q 019227 79 PEAP-MVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAG 155 (344)
Q Consensus 79 ~~~~-vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~-~~IVv~G 155 (344)
.++| +.||+=..| -..+.++....|++.++ |++.+..... .+....++++++. .+.. -.|.++|
T Consensus 20 ~mkp~V~IimGS~S----D~~v~~~a~~~L~~~gI~~e~~V~SAHR----tp~~l~~~~~~a~-----~~g~~ViIa~AG 86 (181)
T 4b4k_A 20 HMKSLVGVIMGSTS----DWETMKYACDILDELNIPYEKKVVSAHR----TPDYMFEYAETAR-----ERGLKVIIAGAG 86 (181)
T ss_dssp --CCSEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTT-----TTTCCEEEEEEC
T ss_pred CCCccEEEEECCHh----HHHHHHHHHHHHHHcCCCeeEEEEcccc----ChHHHHHHHHHHH-----hcCceEEEEecc
Confidence 4454 556664333 23466777788888776 8887765431 2455677776642 1233 3566889
Q ss_pred CchHHHHHHHHHh
Q 019227 156 GDGTVGWVLGSVG 168 (344)
Q Consensus 156 GDGTv~eVln~L~ 168 (344)
|.+-+--++.++.
T Consensus 87 ~aahLpGvvAa~T 99 (181)
T 4b4k_A 87 GAAHLPGMVAAKT 99 (181)
T ss_dssp SSCCHHHHHHTTC
T ss_pred ccccchhhHHhcC
Confidence 9999998887654
No 36
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=50.12 E-value=79 Score=27.25 Aligned_cols=76 Identities=17% Similarity=0.249 Sum_probs=49.4
Q ss_pred hhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHHHHHHHHhhcccCCC
Q 019227 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGR 175 (344)
Q Consensus 97 ~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv~eVln~L~~~~~~~~ 175 (344)
..+.++....|+..++ |++.+..... .+....++++++.+ ..-.-.|.++||.+-+--++.++..
T Consensus 26 ~~v~~~a~~~L~~~Gi~~dv~V~SaHR----~p~~l~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t~------ 91 (183)
T 1o4v_A 26 LPVMKQAAEILEEFGIDYEITIVSAHR----TPDRMFEYAKNAEE----RGIEVIIAGAGGAAHLPGMVASITH------ 91 (183)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTTT----CHHHHHHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHCS------
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEcccC----CHHHHHHHHHHHHh----CCCcEEEEecCcccccHHHHHhccC------
Confidence 3466777778877775 8887765432 34566777776421 1112467788999999999998863
Q ss_pred CCCCcEEEeecCCc
Q 019227 176 EPVPPVAIIPLGTG 189 (344)
Q Consensus 176 ~~~~plgIIP~GTg 189 (344)
.|+--+|.-++
T Consensus 92 ---~PVIgVP~~~~ 102 (183)
T 1o4v_A 92 ---LPVIGVPVKTS 102 (183)
T ss_dssp ---SCEEEEEECCT
T ss_pred ---CCEEEeeCCCC
Confidence 45555565443
No 37
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=49.90 E-value=64 Score=27.15 Aligned_cols=65 Identities=8% Similarity=0.095 Sum_probs=42.9
Q ss_pred hhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCC-cEEEEEcCchHHHHHHHHHhh
Q 019227 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAGGDGTVGWVLGSVGE 169 (344)
Q Consensus 97 ~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~-~~IVv~GGDGTv~eVln~L~~ 169 (344)
..+.++....|+..++ |++.+...+- .+....++++++.+ .... -.|.++|+.+-+--++.++..
T Consensus 15 ~~v~~~a~~~l~~~gi~~ev~V~saHR----~p~~~~~~~~~a~~----~~~~~ViIa~AG~aa~LpgvvA~~t~ 81 (159)
T 3rg8_A 15 MGHAEKIASELKTFGIEYAIRIGSAHK----TAEHVVSMLKEYEA----LDRPKLYITIAGRSNALSGFVDGFVK 81 (159)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTTT----CHHHHHHHHHHHHT----SCSCEEEEEECCSSCCHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEcccC----CHHHHHHHHHHhhh----cCCCcEEEEECCchhhhHHHHHhccC
Confidence 3466777778877776 8887765432 34566777765421 1122 356678999999999998863
No 38
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=48.27 E-value=50 Score=32.27 Aligned_cols=91 Identities=15% Similarity=0.143 Sum_probs=53.8
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT 159 (344)
++++||..+..-. ...+++...|...+. +.+....... + ....+++++.+ +. +.|.||++|| |+
T Consensus 92 ~rvlIVtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~ge~--~--~~~v~~~~~~~----~~--~~D~IIAvGG-GS 156 (450)
T 1ta9_A 92 KSAVVLADQNVWN----ICANKIVDSLSQNGMTVTKLVFGGEA--S--LVELDKLRKQC----PD--DTQVIIGVGG-GK 156 (450)
T ss_dssp SEEEEEEEHHHHH----HTHHHHHHHHHHTTCEEEEEEECSCC--C--HHHHHHHHTTS----CT--TCCEEEEEES-HH
T ss_pred CEEEEEECccHHH----HHHHHHHHHHHHCCCeEEEEeeCCCC--C--HHHHHHHHHHH----hh--CCCEEEEeCC-cH
Confidence 4899998765432 256677777765442 2212221111 1 12344554432 22 6789999988 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeec--CCccch
Q 019227 160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDL 192 (344)
Q Consensus 160 v~eVln~L~~~~~~~~~~~~plgIIP~--GTgNDf 192 (344)
+..+.-.+.-. ..+|+..||. |||--.
T Consensus 157 viD~AK~iA~~------~giP~I~IPTTAgtgSev 185 (450)
T 1ta9_A 157 TMDSAKYIAHS------MNLPSIICPTTASSDAAT 185 (450)
T ss_dssp HHHHHHHHHHH------TTCCEEEEESSCSCSCTT
T ss_pred HHHHHHHHHHh------cCCCEEEEeCCCccCccc
Confidence 88888777642 4689999996 444433
No 39
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=47.69 E-value=41 Score=33.48 Aligned_cols=44 Identities=30% Similarity=0.308 Sum_probs=31.3
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhc-ccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGEL-NKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~-~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||..-+. .|.+. .+ ....+++--||-==-||+.
T Consensus 189 ~Id~LvvIGGdgS~~~A~-~L~e~~~~--~g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 189 GVNILFTVGGDGTQRGAL-VISQEAKR--RGVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp TCSEEEEEECHHHHHHHH-HHHHHHHH--HTCCCEEEEEECCTTSSCC
T ss_pred CCCEEEEeCCCchHHHHH-HHHHHHHH--hCCCceEEeccccccCCCC
Confidence 457999999999987543 23211 01 1246899999999999997
No 40
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=46.88 E-value=26 Score=32.91 Aligned_cols=90 Identities=17% Similarity=0.201 Sum_probs=51.2
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCee-EEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVF-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~-~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDG 158 (344)
.++++||.++.. .+ ..+++...|. ..+. .+....+. .......++.+.+.+ ...++.+.||++|| |
T Consensus 28 ~~kvliVtd~~v----~~-~~~~v~~~L~-~~~~~~~~~ge~~----~~~~~v~~~~~~~~~--~~~~r~d~IIavGG-G 94 (348)
T 1ujn_A 28 AGPAALLFDRRV----EG-FAQEVAKALG-VRHLLGLPGGEAA----KSLEVYGKVLSWLAE--KGLPRNATLLVVGG-G 94 (348)
T ss_dssp SSCEEEEEEGGG----HH-HHHHHHHHHT-CCCEEEECCSGGG----SSHHHHHHHHHHHHH--HTCCTTCEEEEEES-H
T ss_pred CCEEEEEECCcH----HH-HHHHHHHHhc-cCeEEEECCCCCC----CCHHHHHHHHHHHHH--cCCCCCCEEEEECC-c
Confidence 478999998653 23 6677777775 2221 11111111 112334444433211 11345689999988 7
Q ss_pred HHHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 159 Tv~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
++..+...+.... ...+|+..||.
T Consensus 95 sv~D~ak~~A~~~----~rgip~i~IPT 118 (348)
T 1ujn_A 95 TLTDLGGFVAATY----LRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHHh----ccCCCEEEecC
Confidence 8888887765421 24689999996
No 41
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=45.72 E-value=86 Score=29.87 Aligned_cols=101 Identities=18% Similarity=0.239 Sum_probs=54.4
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEee---ecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcC
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE---VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~---~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GG 156 (344)
.++++||..+.+-... .+.+++...|.+.+. ++.+ +.+.. ......++++.+. ..+.|.||++||
T Consensus 43 ~~r~liVtd~~~~~~~--g~~~~v~~~L~~~g~-~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG 110 (407)
T 1vlj_A 43 IRKVLFLYGGGSIKKN--GVYDQVVDSLKKHGI-EWVEVSGVKPNP----VLSKVHEAVEVAK-----KEKVEAVLGVGG 110 (407)
T ss_dssp CCEEEEEECSSHHHHS--SHHHHHHHHHHHTTC-EEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCSEEEEEES
T ss_pred CCeEEEEECchHHhhc--cHHHHHHHHHHHcCC-eEEEecCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC
Confidence 3688888864321111 256777777865442 2222 12221 1233444443321 235689999988
Q ss_pred chHHHHHHHHHhhcc------------cCCCCCCCcEEEeec--CCccchh
Q 019227 157 DGTVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDLS 193 (344)
Q Consensus 157 DGTv~eVln~L~~~~------------~~~~~~~~plgIIP~--GTgNDfA 193 (344)
|++..+.-.+...- .......+|+..||. |||--..
T Consensus 111 -GsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSevt 160 (407)
T 1vlj_A 111 -GSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMN 160 (407)
T ss_dssp -HHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGS
T ss_pred -hhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhhc
Confidence 77777776664421 001125789999995 6654443
No 42
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=44.13 E-value=38 Score=32.06 Aligned_cols=100 Identities=13% Similarity=0.233 Sum_probs=53.9
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~-~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGD 157 (344)
.++++||..+..-. ....+++...|...+. + .+..+.+.. ......++++.+. ..+.|.||++||
T Consensus 31 ~~~~livtd~~~~~---~g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG- 97 (386)
T 1rrm_A 31 YQKALIVTDKTLVQ---CGVVAKVTDKMDAAGLAWAIYDGVVPNP----TITVVKEGLGVFQ-----NSGADYLIAIGG- 97 (386)
T ss_dssp CCEEEEECBHHHHH---TTHHHHHHHHHHHTTCEEEEECBCCSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred CCEEEEEECcchhh---chHHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-
Confidence 36788887654321 1256778888865432 2 122222221 1233444444321 134589999998
Q ss_pred hHHHHHHHHHhhccc--------------CCCCCCCcEEEeec--CCccch
Q 019227 158 GTVGWVLGSVGELNK--------------QGREPVPPVAIIPL--GTGNDL 192 (344)
Q Consensus 158 GTv~eVln~L~~~~~--------------~~~~~~~plgIIP~--GTgNDf 192 (344)
|++..+.-.+..... ......+|+..||. |||-..
T Consensus 98 Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSev 148 (386)
T 1rrm_A 98 GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEV 148 (386)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTT
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhhh
Confidence 777777666533210 00124689999996 655433
No 43
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=43.48 E-value=19 Score=33.78 Aligned_cols=39 Identities=26% Similarity=0.241 Sum_probs=31.0
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||..-+. .|.+ ..+|+--||-==-||+.
T Consensus 93 ~Id~LvvIGGdgS~~~a~-~L~~-------~~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 93 GIDAVVVIGGDGSYHGAL-QLTR-------HGFNSIGLPGTIDNDIP 131 (319)
T ss_dssp TCCEEEEEECHHHHHHHH-HHHH-------TTCCEEEEEEETTCCCT
T ss_pred CCCEEEEECCchHHHHHH-HHHH-------hCCCEEEEeecccCCCC
Confidence 457999999999987653 4443 36889999998899997
No 44
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=43.24 E-value=1.2e+02 Score=25.60 Aligned_cols=76 Identities=16% Similarity=0.172 Sum_probs=48.2
Q ss_pred hhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHHHHHHHHhhcccCCC
Q 019227 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGR 175 (344)
Q Consensus 97 ~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv~eVln~L~~~~~~~~ 175 (344)
....++....|+..++ |++.+...+. .+....++++++.+ ..-.-.|.++|+.+-+--++.++..
T Consensus 18 ~~v~~~a~~~l~~~gi~~ev~V~SaHR----tp~~l~~~~~~~~~----~g~~ViIa~AG~aa~LpgvvA~~t~------ 83 (166)
T 3oow_A 18 WSTMKECCDILDNLGIGYECEVVSAHR----TPDKMFDYAETAKE----RGLKVIIAGAGGAAHLPGMVAAKTT------ 83 (166)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTTT----CHHHHHHHHHHTTT----TTCCEEEEEECSSCCHHHHHHHTCS------
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEcCcC----CHHHHHHHHHHHHh----CCCcEEEEECCcchhhHHHHHhccC------
Confidence 3466777778877775 8887765431 34556677765421 1113456788999999999988753
Q ss_pred CCCCcEEEeecCCc
Q 019227 176 EPVPPVAIIPLGTG 189 (344)
Q Consensus 176 ~~~~plgIIP~GTg 189 (344)
.|+--+|.-++
T Consensus 84 ---~PVIgVP~~~~ 94 (166)
T 3oow_A 84 ---LPVLGVPVKSS 94 (166)
T ss_dssp ---SCEEEEECCCT
T ss_pred ---CCEEEeecCcC
Confidence 45555565444
No 45
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=42.38 E-value=7.3 Score=31.37 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=27.3
Q ss_pred heehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
.++..+..|..+ |||..|..|+-.++.+||...
T Consensus 73 fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~~ 106 (144)
T 3s4e_A 73 FIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNS 106 (144)
T ss_dssp HHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 345566677788 999999999999999999873
No 46
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=41.65 E-value=7.4 Score=33.33 Aligned_cols=32 Identities=13% Similarity=-0.070 Sum_probs=26.8
Q ss_pred eehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
|+..+..|..| |||..|..|+-.++.+||...
T Consensus 110 I~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~ 142 (182)
T 2j16_A 110 IHAATTKREKILIHAQCGLSRSATLIIAYIMKY 142 (182)
T ss_dssp HHHHHHTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEECCCCCChHHHHHHHHHHHH
Confidence 34556677788 999999999999999999764
No 47
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D*
Probab=40.08 E-value=6.8 Score=24.30 Aligned_cols=29 Identities=28% Similarity=0.611 Sum_probs=20.8
Q ss_pred eeeeecccceeeccccCCCCCCceEEeec
Q 019227 310 LIYSGYSCTQGWFLTPCISDPNLRLDICE 338 (344)
Q Consensus 310 ~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (344)
.+-.+|+-.+......|..-|.||.++|.
T Consensus 9 ~ic~~f~~p~~ccsg~cvphp~lrifvc~ 37 (37)
T 4aor_D 9 AICSGFGPPEQCCSGACVPHPILRIFVCQ 37 (37)
T ss_dssp CEECTTSCGGGBTTSCEEECSSBSSEEEC
T ss_pred CccCCCCCccccccccccCCCeeEEEeeC
Confidence 34455566664455569999999999994
No 48
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=39.88 E-value=9.2 Score=30.62 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=26.9
Q ss_pred heehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
.++..+..|..+ |||..|..|+-.++.+||...
T Consensus 73 ~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm~~ 106 (144)
T 3ezz_A 73 YIDAVKDCRGRVLVHSQAGISRSATICLAYLMMK 106 (144)
T ss_dssp HHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 345566667777 999999999999999999874
No 49
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=39.67 E-value=9.3 Score=31.61 Aligned_cols=32 Identities=6% Similarity=-0.198 Sum_probs=26.4
Q ss_pred eehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
++..+..|..| |||..|..|+..++.+||...
T Consensus 80 I~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~~ 112 (161)
T 3emu_A 80 IIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYY 112 (161)
T ss_dssp HHHHHHTTCEEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHHH
Confidence 34555667778 999999999999999999874
No 50
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=39.47 E-value=26 Score=32.88 Aligned_cols=93 Identities=12% Similarity=0.123 Sum_probs=46.6
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGTv 160 (344)
++++||.++... +...+++...| +.+.+++.+....+ .........++.+.+.+ ...+..+.||++|| |++
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e-~~p~~~~v~~~~~~~~~--~~~~r~d~iIavGG-Gsv 102 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGE-KTKTFEQYQETLEYILS--HHVTRNTAIIAVGG-GAT 102 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGG-GGCSHHHHHHHHHHHHT--TCCCTTCEEEEEES-HHH
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCC-CCCCHHHHHHHHHHHHH--cCCCCCceEEEECC-hHH
Confidence 789999886432 22556676666 43212221111100 00112333444433211 11234489999988 788
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 161 GWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 161 ~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
..+...+.... ...+|+..||.
T Consensus 103 ~D~ak~vA~~~----~rgip~i~IPT 124 (354)
T 1xah_A 103 GDFAGFVAATL----LRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHh----ccCCCEEEECC
Confidence 88887765321 25789999997
No 51
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=36.54 E-value=10 Score=30.41 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=26.1
Q ss_pred eehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
++..+..|..+ |||..|..|+-.++.+||...
T Consensus 74 i~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~~ 106 (145)
T 2nt2_A 74 ISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKE 106 (145)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 34555667778 999999999999999999863
No 52
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=36.06 E-value=22 Score=33.30 Aligned_cols=44 Identities=27% Similarity=0.330 Sum_probs=33.2
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh---hhhCC
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS---RSFGW 198 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA---rsLg~ 198 (344)
+-+.++++|||||..-+. .|.+ ..+|+--||-==-||+. .++|+
T Consensus 93 ~Id~L~~IGGdgS~~~a~-~l~~-------~~i~vigiPkTIDNDl~~td~t~Gf 139 (319)
T 4a3s_A 93 GIEGLVVIGGDGSYMGAK-KLTE-------HGFPCVGVPGTIDNDIPGTDFTIGF 139 (319)
T ss_dssp TCCEEEEEECTTHHHHHH-HHHH-------TTCCEEEEEEETTCCCTTCSCCEEH
T ss_pred CCCEEEEeCCcHHHHHHH-HHhc-------cCCcEEEeeccccCCCCCCCCCCCH
Confidence 457899999999987653 4443 36789999998899997 34554
No 53
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=35.36 E-value=1.1e+02 Score=27.77 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=22.9
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 146 ~~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
...|.+|..|| +|+.|++. ...|.-+||.
T Consensus 224 ~~aDlvI~~gG-~T~~E~~~-----------~g~P~i~ip~ 252 (282)
T 3hbm_A 224 NESNKLIISAS-SLVNEALL-----------LKANFKAICY 252 (282)
T ss_dssp HTEEEEEEESS-HHHHHHHH-----------TTCCEEEECC
T ss_pred HHCCEEEECCc-HHHHHHHH-----------cCCCEEEEeC
Confidence 35578999999 99999973 3568888885
No 54
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=33.97 E-value=12 Score=30.11 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=25.4
Q ss_pred eehhhhcCCce-eEeeccccccccchhhhhHH
Q 019227 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (344)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (344)
++..+..|..+ |||.-|..|+-.++.+||..
T Consensus 76 i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl~~ 107 (149)
T 1zzw_A 76 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 107 (149)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 34555567777 99999999999999999986
No 55
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=33.07 E-value=77 Score=34.23 Aligned_cols=46 Identities=13% Similarity=0.123 Sum_probs=32.3
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||..-+ ..|.+.........+|+--||-==-||+.
T Consensus 688 ~Id~LvvIGGdgS~~~a-~~L~~~~~~y~~~~I~vVGIPkTIDNDl~ 733 (989)
T 3opy_A 688 KFDGLIIIGGFEAFTAL-YELDAARAQYPIFNIPMCCLPATVSNNVP 733 (989)
T ss_dssp TCSEEEEEESHHHHHHH-HHHHHHTTTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCCEEEEeCCchHHHHH-HHHHHHHhhCCCcCCcEEeccccccCCCC
Confidence 45799999999998654 45544211111236899999999999996
No 56
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=32.37 E-value=13 Score=30.52 Aligned_cols=31 Identities=16% Similarity=0.048 Sum_probs=25.2
Q ss_pred ehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
+..+..|..+ |||..|..|+-.++.+||...
T Consensus 83 ~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 114 (164)
T 2hcm_A 83 EAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRH 114 (164)
T ss_dssp HHHHHTTCEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 4455567777 999999999999999998764
No 57
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=32.29 E-value=12 Score=30.04 Aligned_cols=32 Identities=13% Similarity=0.083 Sum_probs=26.0
Q ss_pred eehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
++..+..|..+ |||..|..|+-.++.+||...
T Consensus 82 i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~ 114 (157)
T 3rgo_A 82 ALKYQALGQCVYVHCKAGRSRSATMVAAYLIQV 114 (157)
T ss_dssp HHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCCChHHHHHHHHHHHH
Confidence 34555666677 999999999999999998874
No 58
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=32.20 E-value=13 Score=30.73 Aligned_cols=31 Identities=16% Similarity=0.018 Sum_probs=25.5
Q ss_pred ehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 77 ~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 108 (165)
T 1wrm_A 77 HECRLRGESCLVHCLAGVSRSVTLVIAYIMTV 108 (165)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 4445567777 999999999999999999874
No 59
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=32.01 E-value=24 Score=35.76 Aligned_cols=45 Identities=22% Similarity=0.203 Sum_probs=31.6
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||..-+. .|.+.-. .....+++--||-==-||++
T Consensus 166 ~Id~LvvIGGdgS~~~A~-~L~e~~~-~~~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 166 NLNAIIIIGGDDSNTNAA-ILAEYFK-KNGENIQVIGVPKTIDADLR 210 (555)
T ss_dssp TCSEEEEEESHHHHHHHH-HHHHHHH-HTTCCCEEEEEEEETTCCCC
T ss_pred CCCEEEEeCCCcHHHHHH-HHHHHHH-HhCCCCcEEEeccccCCCCC
Confidence 457999999999987554 2332100 11346899999998899996
No 60
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=31.72 E-value=1.5e+02 Score=23.16 Aligned_cols=30 Identities=17% Similarity=0.416 Sum_probs=21.3
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcC
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQ 111 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~ 111 (344)
|++++|++=...| +.+++.+.|.+.|.+.+
T Consensus 1 M~ki~I~y~S~tG--nT~~~A~~ia~~l~~~g 30 (148)
T 3f6r_A 1 MSKVLIVFGSSTG--NTESIAQKLEELIAAGG 30 (148)
T ss_dssp -CEEEEEEECSSS--HHHHHHHHHHHHHHTTT
T ss_pred CCeEEEEEECCCc--hHHHHHHHHHHHHHhCC
Confidence 3578888866554 56788889988887643
No 61
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=30.47 E-value=57 Score=27.68 Aligned_cols=35 Identities=11% Similarity=0.154 Sum_probs=26.2
Q ss_pred CCcEEEEEcC-chHHHHHHHHHhhcccCCCCCCCcEEEeecC
Q 019227 147 QKMRIVVAGG-DGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (344)
Q Consensus 147 ~~~~IVv~GG-DGTv~eVln~L~~~~~~~~~~~~plgIIP~G 187 (344)
....||..|| -|-...+..+..+. ....+||||-.
T Consensus 44 ~g~~lVsGGg~~Gim~aa~~gAl~~------gG~tigVlP~~ 79 (176)
T 2iz6_A 44 HGWILLTGGRSLGVMHEAMKGAKEA------GGTTIGVLPGP 79 (176)
T ss_dssp TTCEEEEECSSSSHHHHHHHHHHHT------TCCEEEEECC-
T ss_pred CCCEEEECCCccCHhHHHHHHHHHc------CCEEEEEeCch
Confidence 4567888888 88888888887653 34689999965
No 62
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=30.31 E-value=97 Score=33.34 Aligned_cols=46 Identities=13% Similarity=0.132 Sum_probs=32.2
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||..-+ ..|.+..+......+|+--||-==-||+.
T Consensus 662 ~Id~LvvIGGdgS~~~a-~~L~~~~~~~~~~~i~vVGIPkTIDNDl~ 707 (941)
T 3opy_B 662 GFDGLILVGGFEAFISL-HQLERARINYPSLRIPLVLIPATISNNVP 707 (941)
T ss_dssp TCSEEEEEESHHHHHHH-HHHHHGGGTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCCEEEEeCCchHHHHH-HHHHHHHHhcCccCCcEEeeeccccCCCC
Confidence 45899999999998654 34433211111236899999999999997
No 63
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=29.64 E-value=59 Score=27.88 Aligned_cols=34 Identities=21% Similarity=0.421 Sum_probs=24.7
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeecC
Q 019227 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (344)
Q Consensus 148 ~~~IVv~GGD-GTv~eVln~L~~~~~~~~~~~~plgIIP~G 187 (344)
...||..||. |-...+..+..+. ....+||+|-+
T Consensus 33 g~~lV~GGg~~GiM~aa~~gA~~~------gG~~iGv~p~~ 67 (191)
T 1t35_A 33 GIGLVYGGSRVGLMGTIADAIMEN------GGTAIGVMPSG 67 (191)
T ss_dssp TCEEEECCCCSHHHHHHHHHHHTT------TCCEEEEEETT
T ss_pred CCEEEECCCcccHHHHHHHHHHHc------CCeEEEEeCch
Confidence 4456666666 9888888887653 45689999976
No 64
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=29.34 E-value=16 Score=30.39 Aligned_cols=31 Identities=13% Similarity=0.012 Sum_probs=24.6
Q ss_pred ehhhhc-CCce-eEeeccccccccchhhhhHHh
Q 019227 18 DSIRGC-GLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 18 ~~~~~~-~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
+..+.. |..+ |||..|..|+-.++.+||...
T Consensus 108 ~~~~~~~~~~VlVHC~~G~~RSg~~v~ayLm~~ 140 (183)
T 3f81_A 108 DQALAQKNGRVLVHCREGYSRSPTLVIAYLMMR 140 (183)
T ss_dssp HHHHHSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCeEEEECCCCcchHHHHHHHHHHHH
Confidence 344444 6677 999999999999999999763
No 65
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=29.07 E-value=45 Score=35.08 Aligned_cols=48 Identities=21% Similarity=0.178 Sum_probs=31.7
Q ss_pred CCcEEEEEcCchHHHHHH----------HHHhhccc-----CCCCCCCcEEEeecCCccchhh
Q 019227 147 QKMRIVVAGGDGTVGWVL----------GSVGELNK-----QGREPVPPVAIIPLGTGNDLSR 194 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVl----------n~L~~~~~-----~~~~~~~plgIIP~GTgNDfAr 194 (344)
+-+.+|++|||||+.-+. +.|.+..+ ......+++--||-==-||++-
T Consensus 98 ~Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~is~e~~~~~~~i~vVGiPkTIDNDl~g 160 (766)
T 3o8o_B 98 GVDALIVCGGDGSLTGADLFRSEWPSLIEELLKTNRISNEQYERMKHLNICGTVGSIDNDMST 160 (766)
T ss_dssp TCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHTCCCEEEEEEBCTTCCCTT
T ss_pred CCCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhcccccHHHHhcCCCCcEEEEeccccCCCCC
Confidence 457899999999997552 22322100 0012468899999888899983
No 66
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=29.04 E-value=17 Score=30.87 Aligned_cols=31 Identities=13% Similarity=-0.078 Sum_probs=25.3
Q ss_pred ehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
+..+..|..| |||..|..|+-.++.+||...
T Consensus 91 ~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~~ 122 (188)
T 2esb_A 91 HSVEMKQGRTLLHCAAGVSRSAALCLAYLMKY 122 (188)
T ss_dssp HHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 4445567778 999999999999999999763
No 67
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=28.88 E-value=35 Score=36.06 Aligned_cols=47 Identities=19% Similarity=0.142 Sum_probs=31.6
Q ss_pred CCcEEEEEcCchHHHHHH----------HHHhhc-----ccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVL----------GSVGEL-----NKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVl----------n~L~~~-----~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||+.-+. ..|.+. +.......+++--||-==-||++
T Consensus 99 ~Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~is~e~~~~~~~i~vVGIPkTIDNDl~ 160 (787)
T 3o8o_A 99 GIDALVVCGGDGSLTGADLFRHEWPSLVDELVAEGRFTKEEVAPYKNLSIVGLVGSIDNDMS 160 (787)
T ss_dssp TEEEEEEEECHHHHHHHHHHHTTHHHHHHHHHSSSSCCTTTTTTTCSCEEEEEEEESSCCCT
T ss_pred CCCEEEEeCCCchHHHHHHHHHhhHHHHHHHHhcccccHHHHhcCCCCcEEEEeecCcCCCC
Confidence 447899999999988652 223221 00112246899999988889998
No 68
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=28.18 E-value=17 Score=29.29 Aligned_cols=30 Identities=13% Similarity=-0.013 Sum_probs=24.3
Q ss_pred ehhhhcCCce-eEeeccccccccchhhhhHH
Q 019227 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (344)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (344)
+..+..|..+ |||.-|..|+-.++.+||..
T Consensus 84 ~~~~~~~~~vlvHC~aG~~RS~~~~~ayl~~ 114 (154)
T 2r0b_A 84 DGSLQMGGKVLVHGNAGISRSAAFVIAYIME 114 (154)
T ss_dssp HHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCCCChHHHHHHHHHHH
Confidence 3444566777 99999999999999999875
No 69
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=27.82 E-value=16 Score=30.38 Aligned_cols=33 Identities=12% Similarity=-0.004 Sum_probs=26.3
Q ss_pred heehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
.++..+..|..+ |||.-|..|+-.++..||...
T Consensus 100 ~i~~~~~~~~~VlVHC~aG~~RSg~~v~aylm~~ 133 (176)
T 3cm3_A 100 FLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSK 133 (176)
T ss_dssp HHHHHHHHTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcEEEECCcCCCHHHHHHHHHHHHH
Confidence 344555556677 999999999999999999764
No 70
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=27.77 E-value=1e+02 Score=32.44 Aligned_cols=46 Identities=26% Similarity=0.248 Sum_probs=32.1
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||+.-+. .|.+.........+|+--||-==-||+.
T Consensus 489 ~Id~LvvIGGdgS~~~a~-~L~~~~~~~~~~~i~vvgiPkTIDNDl~ 534 (762)
T 3o8l_A 489 NIQGLVIIGGFEAYTGGL-ELMEGRKQFDELCIPFVVIPATVSNNVP 534 (762)
T ss_dssp TCCCEEEEESHHHHHHHH-HHHHHHHHCSTTCSCEEEEEBCTTCCCT
T ss_pred CCCEEEEeCCchHHHHHH-HHHHHHHhccccCCCEEeeccccCCCCC
Confidence 457899999999987664 2322111111246899999999999997
No 71
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=27.72 E-value=20 Score=31.40 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=26.1
Q ss_pred eehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
++..+..|..+ |||..|..|+-.++.+||...
T Consensus 76 I~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~~ 108 (211)
T 2g6z_A 76 IDCVREKGGKVLVHSEAGISRSPTICMAYLMKT 108 (211)
T ss_dssp HHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEECCCCCCcHHHHHHHHHHHH
Confidence 34555667778 999999999999999999863
No 72
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=27.43 E-value=61 Score=28.46 Aligned_cols=32 Identities=34% Similarity=0.533 Sum_probs=24.0
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEee
Q 019227 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIP 185 (344)
Q Consensus 148 ~~~IVv~GGD-GTv~eVln~L~~~~~~~~~~~~plgIIP 185 (344)
...||..||. |-...+..+..+. ....+||+|
T Consensus 41 g~~lV~GGg~~GlM~aa~~gA~~~------GG~~iGv~p 73 (216)
T 1ydh_A 41 KIDLVYGGGSVGLMGLISRRVYEG------GLHVLGIIP 73 (216)
T ss_dssp TCEEEECCCSSHHHHHHHHHHHHT------TCCEEEEEE
T ss_pred CCEEEECCCcccHhHHHHHHHHHc------CCcEEEEec
Confidence 4567777787 8888888877653 356899999
No 73
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=27.18 E-value=59 Score=28.02 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=23.5
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 148 ~~~IVv~GGD-GTv~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
...||..||. |-...+..+..+. ....+||+|-
T Consensus 44 g~~lv~GGG~~GlM~a~~~ga~~~------GG~viGv~p~ 77 (189)
T 3sbx_A 44 GWTLVWGGGHVSAMGAVSSAARAH------GGWTVGVIPK 77 (189)
T ss_dssp TCEEEECCBCSHHHHHHHHHHHTT------TCCEEEEEET
T ss_pred CCEEEECCCccCHHHHHHHHHHHc------CCcEEEEcCc
Confidence 3455655567 8888888877653 3568999996
No 74
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=27.10 E-value=15 Score=26.22 Aligned_cols=12 Identities=17% Similarity=0.053 Sum_probs=10.4
Q ss_pred cEEEEEcCchHH
Q 019227 149 MRIVVAGGDGTV 160 (344)
Q Consensus 149 ~~IVv~GGDGTv 160 (344)
.-|+|++||||+
T Consensus 39 tGViVg~~dgtv 50 (65)
T 2x9a_A 39 SGIGIGYDNDTS 50 (65)
T ss_dssp EEEEEEETTTTE
T ss_pred eeEEEECCCCCE
Confidence 369999999997
No 75
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=26.30 E-value=18 Score=30.16 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=25.5
Q ss_pred eehhhhcCCce-eEeeccccccccchhhhhHH
Q 019227 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (344)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (344)
++..+..|..+ |||.-|..|+-.++.+||..
T Consensus 80 i~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~ 111 (177)
T 2oud_A 80 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 111 (177)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEcCCCCCchHHHHHHHHHH
Confidence 34455567777 99999999999999999985
No 76
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=25.62 E-value=19 Score=28.87 Aligned_cols=26 Identities=15% Similarity=-0.008 Sum_probs=22.1
Q ss_pred cCCce-eEeeccccccccchhhhhHHh
Q 019227 23 CGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 23 ~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
.+..+ |||.-|..|+-.++.+||...
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~ 110 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLY 110 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 46667 999999999998888998764
No 77
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=25.59 E-value=20 Score=29.13 Aligned_cols=31 Identities=13% Similarity=-0.079 Sum_probs=25.0
Q ss_pred ehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
+..+..|..+ |||..|..|+-.++.+||...
T Consensus 79 ~~~~~~~~~VlVHC~~G~~RS~~vv~ayLm~~ 110 (155)
T 2hxp_A 79 DEALSQNCGVLVHSLAGVSRSVTVTVAYLMQK 110 (155)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 4445567777 999999999999999998753
No 78
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=25.57 E-value=20 Score=31.31 Aligned_cols=31 Identities=13% Similarity=-0.019 Sum_probs=24.7
Q ss_pred ehhh-hcCCce-eEeeccccccccchhhhhHHh
Q 019227 18 DSIR-GCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 18 ~~~~-~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
+..+ ..|..| |||..|..|+-.++.+||...
T Consensus 132 ~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~~ 164 (219)
T 2y96_A 132 DRALSDDHSKILVHCVMGRSRSATLVLAYLMIH 164 (219)
T ss_dssp HHHHTSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 3444 456667 999999999999999999863
No 79
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=25.35 E-value=21 Score=28.30 Aligned_cols=30 Identities=13% Similarity=-0.025 Sum_probs=24.2
Q ss_pred hhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 19 SIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 19 ~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
..+..+..+ |||.-|..|+-.++..||...
T Consensus 84 ~~~~~~~~vlVHC~aG~~Rsg~~~~~~l~~~ 114 (151)
T 2img_A 84 EANARGEAVGVHCALGFGRTGTMLACYLVKE 114 (151)
T ss_dssp HHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHhCCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 333456666 999999999999999998764
No 80
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=24.97 E-value=23 Score=28.80 Aligned_cols=31 Identities=13% Similarity=0.008 Sum_probs=24.5
Q ss_pred ehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 78 ~~~~~~~~~VlVHC~aG~~RSg~~~~aylm~~ 109 (160)
T 1yz4_A 78 HCCRLNGGNCLVHSFAGISRSTTIVTAYVMTV 109 (160)
T ss_dssp HHHHHTTCCEEEEETTSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 4444557777 999999999998888998653
No 81
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=24.67 E-value=3.2e+02 Score=25.67 Aligned_cols=39 Identities=21% Similarity=0.178 Sum_probs=26.4
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhccc------------CCCCCCCcEEEeec
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNK------------QGREPVPPVAIIPL 186 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~------------~~~~~~~plgIIP~ 186 (344)
+.|.||++|| |++..+.-.+...-. ....+.+|+..||.
T Consensus 109 ~~D~IIavGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPT 159 (375)
T 3rf7_A 109 LPVSVVGLGG-GSTMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPT 159 (375)
T ss_dssp CCSEEEEEES-HHHHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEES
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcC
Confidence 4789999999 888887776643210 01123689999995
No 82
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=24.47 E-value=1.2e+02 Score=31.98 Aligned_cols=46 Identities=15% Similarity=0.181 Sum_probs=32.1
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||..-+. .|.+.........+|+--||-==-||+.
T Consensus 483 ~Id~LvvIGGdgS~~~a~-~L~~~~~~~~~~~i~vIgiPkTIDNDl~ 528 (787)
T 3o8o_A 483 KLDGLIILGGFEGFRSLK-QLRDGRTQHPIFNIPMCLIPATVSNNVP 528 (787)
T ss_dssp TCSEEEEEESHHHHHHHH-HHHHHTTTCGGGGSCEEEEEBCTTCCCT
T ss_pred CCCEEEEeCCchHHHHHH-HHHHHHHhcCccCCceeecccccccCCC
Confidence 458999999999987643 4433111111135899999999999997
No 83
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=24.43 E-value=70 Score=27.76 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=24.4
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeecC
Q 019227 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (344)
Q Consensus 148 ~~~IVv~GGD-GTv~eVln~L~~~~~~~~~~~~plgIIP~G 187 (344)
...||-.||. |-...+..+..+. ....+||+|-.
T Consensus 53 g~~lV~GGG~~GlM~a~~~gA~~~------GG~viGv~p~~ 87 (199)
T 3qua_A 53 GWTLVSGGGNVSAMGAVAQAARAK------GGHTVGVIPKA 87 (199)
T ss_dssp TCEEEECCBCSHHHHHHHHHHHHT------TCCEEEEEEGG
T ss_pred CCEEEECCCccCHHHHHHHHHHHc------CCcEEEEeCch
Confidence 3456666676 8888888887653 35689999963
No 84
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=23.76 E-value=1.2e+02 Score=24.96 Aligned_cols=28 Identities=11% Similarity=0.330 Sum_probs=20.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhh
Q 019227 80 EAPMVVFINSRSGGRHGPELKERLQELMGK 109 (344)
Q Consensus 80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~ 109 (344)
|++++||+=..+ |+.+++.+.|.+.|..
T Consensus 1 M~kilIiY~S~t--GnT~~iA~~ia~~l~~ 28 (182)
T 2wc1_A 1 MAKIGLFFGSDT--GTTRKIAKQIKDMFDD 28 (182)
T ss_dssp CCSEEEEECCSS--SHHHHHHHHHHTTSCT
T ss_pred CcEEEEEEECCC--chHHHHHHHHHHHhcc
Confidence 357888886554 4567888888887754
No 85
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=23.64 E-value=1.1e+02 Score=32.28 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=31.6
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||..-+ +.|.+..+......+|+--||-==-||+.
T Consensus 484 ~Id~LvvIGGdgS~~~a-~~L~~~~~~~~~~~i~vvgiPkTIDNDl~ 529 (766)
T 3o8o_B 484 EFDGLIIVGGFEAFESL-HQLERARESYPAFRIPMVLIPATLSNNVP 529 (766)
T ss_dssp TCSEEEEEESHHHHHHH-HHHHTTTTTCGGGCSCCCEEEBCTTCCCS
T ss_pred CCCEEEEeCCchHHHHH-HHHHHHHHhcCccCCcEEeeccccccCCC
Confidence 45799999999998654 34433111011136888899999999996
No 86
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=23.61 E-value=1.7e+02 Score=28.32 Aligned_cols=45 Identities=20% Similarity=0.180 Sum_probs=31.0
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||..-+. .|.+.-. .....+++--||-==-||++
T Consensus 104 ~Id~Lv~IGGdgS~~~A~-~L~~~~~-~~g~~i~vIGiPkTIDNDl~ 148 (419)
T 3hno_A 104 DIGYFFYNGGGDSADTCL-KVSQLSG-TLGYPIQAIHVPKTVDNDLP 148 (419)
T ss_dssp TEEEEEEEESHHHHHHHH-HHHHHHH-HTTCCCEEEEEECCTTCCCS
T ss_pred CCCEEEEeCCchHHHHHH-HHHHHHH-HhCCCccEEEecccccCCCc
Confidence 457899999999987553 3332100 01246888889988899997
No 87
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=23.52 E-value=86 Score=27.06 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=23.5
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeec
Q 019227 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~ 186 (344)
....||..|+-|-...+..+..+. ....+||||.
T Consensus 57 ~G~~vVsGg~~GiM~aa~~gAl~~------GG~~iGVlP~ 90 (195)
T 1rcu_A 57 KGYLVFNGGRDGVMELVSQGVREA------GGTVVGILPD 90 (195)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHT------TCCEEEEEST
T ss_pred CCCEEEeCCHHHHHHHHHHHHHHc------CCcEEEEeCC
Confidence 345667767777777777776652 3468999997
No 88
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=23.30 E-value=85 Score=27.48 Aligned_cols=34 Identities=29% Similarity=0.455 Sum_probs=24.3
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeecC
Q 019227 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (344)
Q Consensus 148 ~~~IVv~GGD-GTv~eVln~L~~~~~~~~~~~~plgIIP~G 187 (344)
...||..||. |-...+..+.... ....+||||-.
T Consensus 45 G~~vVsGGg~~GiM~aa~~gAl~~------GG~tiGVlP~~ 79 (215)
T 2a33_A 45 NIDLVYGGGSIGLMGLVSQAVHDG------GRHVIGIIPKT 79 (215)
T ss_dssp TCEEEECCCSSHHHHHHHHHHHHT------TCCEEEEEESS
T ss_pred CCEEEECCChhhHhHHHHHHHHHc------CCcEEEEcchH
Confidence 3466666776 8888888777653 35689999964
No 89
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=22.91 E-value=21 Score=28.31 Aligned_cols=30 Identities=17% Similarity=0.027 Sum_probs=24.2
Q ss_pred ehhhhcCCce-eEeeccccccccchhhhhHH
Q 019227 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (344)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (344)
+..+..+..+ |||.-|..|+-.++..||..
T Consensus 82 ~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~ 112 (150)
T 4erc_A 82 DEANARGEAVGVHCALGFGRTGTMLACYLVK 112 (150)
T ss_dssp HHHHHTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 3444556666 99999999999999999876
No 90
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=22.84 E-value=2e+02 Score=27.95 Aligned_cols=76 Identities=18% Similarity=0.218 Sum_probs=48.8
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecchhHHHHHHhccchhhhccCCC--cEEEEEcCc
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK--MRIVVAGGD 157 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~--~~IVv~GGD 157 (344)
.++.||.=..| -..+.++....|...++ |++.+...+- .+....++++++. .... -.|.++||.
T Consensus 266 ~~V~Ii~gs~S----D~~~~~~a~~~l~~~gi~~~v~V~saHR----~p~~~~~~~~~~~-----~~g~~~viIa~AG~~ 332 (425)
T 2h31_A 266 CRVVVLMGSTS----DLGHCEKIKKACGNFGIPCELRVTSAHK----GPDETLRIKAEYE-----GDGIPTVFVAVAGRS 332 (425)
T ss_dssp CEEEEEESCGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHHH-----TTCCCEEEEEECCSS
T ss_pred CeEEEEecCcc----cHHHHHHHHHHHHHcCCceEEeeeeccC----CHHHHHHHHHHHH-----HCCCCeEEEEEcCcc
Confidence 45667663333 23456677777777765 8887765432 3456677776542 1222 367788999
Q ss_pred hHHHHHHHHHhh
Q 019227 158 GTVGWVLGSVGE 169 (344)
Q Consensus 158 GTv~eVln~L~~ 169 (344)
|.+--|+.++..
T Consensus 333 a~Lpgvva~~t~ 344 (425)
T 2h31_A 333 NGLGPVMSGNTA 344 (425)
T ss_dssp CCHHHHHHHHCS
T ss_pred cchHhHHhccCC
Confidence 999999998863
No 91
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=22.12 E-value=27 Score=29.63 Aligned_cols=32 Identities=16% Similarity=-0.022 Sum_probs=25.2
Q ss_pred eehhhhcCCce-eEeeccccccccchhhhhHHh
Q 019227 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
++..+..|..+ |||..|..|+-.++.+||...
T Consensus 96 i~~~~~~~~~VlVHC~aG~~RSgtvv~ayLm~~ 128 (190)
T 2wgp_A 96 IHSVSRKHGATLVHCAAGVSRSATLCIAYLMKF 128 (190)
T ss_dssp HHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHH
Confidence 34444556677 999999999999989998764
No 92
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=21.61 E-value=28 Score=29.91 Aligned_cols=26 Identities=8% Similarity=-0.107 Sum_probs=22.5
Q ss_pred cCCce-eEeeccccccccchhhhhHHh
Q 019227 23 CGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (344)
Q Consensus 23 ~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (344)
.|..| |||..|..|+-.++.+||...
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~ 156 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIY 156 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHH
Confidence 45667 999999999999999999863
No 93
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=21.31 E-value=29 Score=31.82 Aligned_cols=13 Identities=46% Similarity=0.917 Sum_probs=11.4
Q ss_pred cEEEEEcCchHHH
Q 019227 149 MRIVVAGGDGTVG 161 (344)
Q Consensus 149 ~~IVv~GGDGTv~ 161 (344)
.++|+|||+||-+
T Consensus 47 q~~i~~g~~~t~~ 59 (275)
T 3gw6_A 47 QRIIFCGGEGTSS 59 (275)
T ss_dssp CEEEEESSSSSST
T ss_pred cEEEEecCCCCCC
Confidence 5899999999865
No 94
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=21.19 E-value=1.6e+02 Score=30.97 Aligned_cols=47 Identities=17% Similarity=0.201 Sum_probs=31.0
Q ss_pred CCcEEEEEcCchHHHHHHH----------HHhhcc-----cCCCCCCCcEEEeecCCccchh
Q 019227 147 QKMRIVVAGGDGTVGWVLG----------SVGELN-----KQGREPVPPVAIIPLGTGNDLS 193 (344)
Q Consensus 147 ~~~~IVv~GGDGTv~eVln----------~L~~~~-----~~~~~~~~plgIIP~GTgNDfA 193 (344)
+-+.+|++|||||+.-+.- .|.+.. .......+++--||-==-||++
T Consensus 109 ~Id~LvvIGGdgS~~gA~~l~~e~~~ll~eL~~~g~i~~~~~~~~~~i~vVGIPkTIDNDl~ 170 (762)
T 3o8l_A 109 GITNLCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKITAEEATRSSYLNIVGLVGSIDNDFC 170 (762)
T ss_dssp CCCEEEEEECHHHHHHHHHHHHTTHHHHHHTTTTTSCTTTGGGSTTCCEEEEEEBCTTCCCS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHhHHHHHHHHhccchhHHHHhcCCCCCeEEeecCcccCCC
Confidence 4579999999999876541 121110 0011246888889988889998
No 95
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=21.12 E-value=51 Score=27.68 Aligned_cols=40 Identities=25% Similarity=0.264 Sum_probs=24.1
Q ss_pred EEcCchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhhC
Q 019227 153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFG 197 (344)
Q Consensus 153 v~GGDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsLg 197 (344)
.+|||-|- +++.-+... ....+|-+-+|=+|| ||+++..+
T Consensus 57 Gi~G~tt~-~~l~r~~~~---v~~~~Pd~vvi~~G~-ND~~~~~~ 96 (209)
T 4hf7_A 57 GISGQTSY-QFLLRFRED---VINLSPALVVINAGT-NDVAENTG 96 (209)
T ss_dssp ECTTCCHH-HHHHHHHHH---TGGGCCSEEEECCCH-HHHTTSSS
T ss_pred ccCcccHH-HHHHHHHHH---HHhcCCCEEEEEeCC-CcCccccc
Confidence 46888654 344433220 112456788888887 99876554
No 96
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=21.09 E-value=2.1e+02 Score=22.81 Aligned_cols=28 Identities=21% Similarity=0.364 Sum_probs=20.0
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhc
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKE 110 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~ 110 (344)
++++||+=..+ |+.+++.+.|.+.|...
T Consensus 1 ~kilIvY~S~t--GnT~~vA~~ia~~l~~~ 28 (169)
T 1czn_A 1 AKIGLFYGTQT--GVTQTIAESIQQEFGGE 28 (169)
T ss_dssp CCEEEEECCSS--SHHHHHHHHHHHHHTST
T ss_pred CeEEEEEECCC--cHHHHHHHHHHHHhCcc
Confidence 36778875554 46778889998888653
No 97
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=20.33 E-value=3.6e+02 Score=22.15 Aligned_cols=105 Identities=19% Similarity=0.105 Sum_probs=54.1
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEeeecccceeecc---hhHHHHHHhccchhhhccCCCcEEEEEc-
Q 019227 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYG---LACLEKLAELGDFCAKDTRQKMRIVVAG- 155 (344)
Q Consensus 81 ~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~-~~l~~~~~~~~~t~~---~g~a~~la~~~~~~~~~~~~~~~IVv~G- 155 (344)
++-+.|..|..|..+.....+++.+.|.+.+. +... +.+.+....+ .+...++.+. ....+...|.||+..
T Consensus 2 ~mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G~Vl~~h-v~~~~l~~~g~~~~~~~~~i~~~---d~~~i~~aD~vvA~l~ 77 (152)
T 4fyk_A 2 RRSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEH-VADAELEPLGEEAAGGDQFIHEQ---NLNWLQQADVVVAEVT 77 (152)
T ss_dssp -CEEEEECCSTTCCTTHHHHHHHHHHHTTTSEECCCC--------------CCCHHHHHHH---HHHHHHHCSEEEEECS
T ss_pred CceEEEECCCCCcHHHHHHHHHHHHHHHHcCcccccc-cCchhhhhccccccCCHHHHHHH---HHHHHHHCCEEEEeCC
Confidence 34566788998876655678899999987652 2211 1111100000 0112222221 122345678888875
Q ss_pred --CchHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhh
Q 019227 156 --GDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSF 196 (344)
Q Consensus 156 --GDGTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsL 196 (344)
..||.-|+-=.... ..|-+++..--++++++..+
T Consensus 78 ~~d~Gt~~EiG~A~al-------gkPV~~l~~~~~~~~ls~mi 113 (152)
T 4fyk_A 78 QPSLGVGYELGRAVAL-------GKPILCLFRPQSGRVLSAMI 113 (152)
T ss_dssp SCCHHHHHHHHHHHHT-------TCCEEEEECGGGSCCCCHHH
T ss_pred CCCCCHHHHHHHHHHc-------CCeEEEEEeCCccchhHHHH
Confidence 47888888544432 24455656544555665443
Done!