BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019229
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic
OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1
Length = 409
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/324 (64%), Positives = 252/324 (77%), Gaps = 17/324 (5%)
Query: 1 MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLS-------------NCSQNRTNGLVAQ 47
+A++F+ ++ C C S +L+ S + + NC R + +
Sbjct: 2 VAVRFYAVEMSLP-CLCPCPSSPISLSLCSPRFNLLNTTSRRLGLSRNCRTLRIS-CSSS 59
Query: 48 SSLTDQ-QQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS 106
S++TDQ QQ +F E +LIDALIGIQGRG+SAS +QLNDVE AVKVLEGL+G+ +PT S
Sbjct: 60 STVTDQTQQSSFNDAELKLIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDS 119
Query: 107 SLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLR-TNDPRVSNIVKFSEAIGEL 165
LIEGRW+LMFTTRPGTASPIQRTF GV+ F+VFQ++ L+ TNDPRVSNIVKFS+ IGEL
Sbjct: 120 DLIEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIGEL 179
Query: 166 KVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNL 225
KVEA ASIKDGKR+LF+FD+AAF KFLPFK PYPVPFRLLGDEAKGWLDTTYLSPSGNL
Sbjct: 180 KVEAVASIKDGKRVLFRFDRAAFDLKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNL 239
Query: 226 RISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQ 285
RISRGNKGTTFVLQK+T PRQ LL+ IS V +AI+EF++SN ++AE+ ELLEG WQ
Sbjct: 240 RISRGNKGTTFVLQKETVPRQKLLATISQDKGVAEAIDEFLASNSNSAEDNYELLEGSWQ 299
Query: 286 MLWSSQMETDSWIENAGNGLMGKQ 309
M+WSSQM TDSWIENA NGLMG+Q
Sbjct: 300 MIWSSQMYTDSWIENAANGLMGRQ 323
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 93/223 (41%), Gaps = 49/223 (21%)
Query: 65 LIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSS-LIEGRWQLMFTTRPGT 123
L+D+L G RG SAS+ ++ + LE P PT + L+ G+W L +T+ G
Sbjct: 99 LVDSLYGTD-RGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGL 157
Query: 124 ASPIQRTFVGVETFSVFQEIS--LRTNDPRVSNIVKFSEAIGELKVEAAAS--IKDGKRI 179
+ R G+ EIS + +++ V N V F+ + + A I+ KR+
Sbjct: 158 FPLLSR---GIVPLVKVDEISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRV 214
Query: 180 LFQFDKAAFS-------------FKFLPFKFPY-------------------------PV 201
+F++ +FL K P+
Sbjct: 215 QIKFEEGVIGTPQLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPL 274
Query: 202 PFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
F L GD A+ WL TTYL ++RISRG+ G+ FVL K+ P
Sbjct: 275 KFSLPGDSAQSWLLTTYL--DKDIRISRGDGGSVFVLIKEGSP 315
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 49/223 (21%)
Query: 65 LIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSS-LIEGRWQLMFTTRPGT 123
L+D+L G RG SAS+ ++ + LE P PT + L+ G+W L +T+
Sbjct: 90 LVDSLYGTD-RGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNL 148
Query: 124 ASPIQRTFVGVETFSVFQEIS--LRTNDPRVSNIVKFSEAIG--ELKVEAAASIKDGKRI 179
+ R G+ EIS + +++ V N V+F+ +G + A I+ KR+
Sbjct: 149 FPLLSR---GIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRV 205
Query: 180 LFQFDKAAFSFKFL--PFKFPY------------------------------------PV 201
+F++ L + P P+
Sbjct: 206 QIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPL 265
Query: 202 PFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
F L D A+ WL TTYL ++RISRG+ G+ FVL K+ P
Sbjct: 266 KFSLPADNAQSWLLTTYL--DKDIRISRGDGGSVFVLIKEGSP 306
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 51/227 (22%)
Query: 62 ENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTR 120
+ QL D+L G RG SAS+ ++ + LE P PT + +L+ G+W L +T+
Sbjct: 103 KKQLADSLYG-TNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSF 161
Query: 121 PGTASPIQR---TFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAAS--IKD 175
G + R V VE S ++ + V N V F+ + + A ++
Sbjct: 162 SGLFPLLSRGNLPLVRVEEISQ----TIDSESFTVQNSVVFAGPLATTSISTNAKFEVRS 217
Query: 176 GKRILFQFDKAAF-------------SFKFL-------PFKFPY---------------- 199
KR+ +F++ + +FL PFK
Sbjct: 218 PKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISS 277
Query: 200 --PVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
P+ F + + A+ WL TTYL LRISRG+ G+ FVL K+ P
Sbjct: 278 QPPIKFPITNNNAQSWLLTTYLD--DELRISRGDAGSVFVLIKEGSP 322
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 51/227 (22%)
Query: 62 ENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTR 120
+ QL D+L G RG SAS+ ++ + LE P PT + +L+ G+W L +T+
Sbjct: 103 KKQLADSLYG-TNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSF 161
Query: 121 PGTASPIQR---TFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAAS--IKD 175
G + R V VE S ++ + V N V F+ + + A ++
Sbjct: 162 SGLFPLLSRGNLPLVRVEEISQ----TIDSESFTVQNSVVFAGPLATTSISTNAKFEVRS 217
Query: 176 GKRILFQFDKAAF-------------SFKFL-------PFKFPY---------------- 199
KR+ +F++ + +FL PFK
Sbjct: 218 PKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISS 277
Query: 200 --PVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
P+ F + + A+ WL TTYL LRI RG+ G+ FVL K+ P
Sbjct: 278 QPPIKFPITNNNAQSWLLTTYL--DDELRIPRGDAGSVFVLIKEGSP 322
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 26/181 (14%)
Query: 62 ENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRP 121
+ +L++A+ ++ RG +AS ++ + +E + +P S L+ G+W+L++TT
Sbjct: 75 KQELLEAIEPLE-RGATASPDDQLRIDQLARKVEAVNPTKEPLKSDLVNGKWELIYTTSA 133
Query: 122 GTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVK---FSEAIGELKVEAAASIKDGKR 178
+ F + + + +Q I++ T +V N+ ++ G++K + +
Sbjct: 134 SILQAKKPRF--LRSITNYQSINVDTL--KVQNMETWPFYNSVTGDIKPLNSKKVA---- 185
Query: 179 ILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVL 238
+ Q K F+P K P D A+G L+ TY+ LR+SRG+KG F+L
Sbjct: 186 VKLQVFKI---LGFIPIKAP---------DSARGELEITYV--DEELRLSRGDKGNLFIL 231
Query: 239 Q 239
+
Sbjct: 232 K 232
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 89/225 (39%), Gaps = 56/225 (24%)
Query: 64 QLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTR-- 120
+L +AL G + RG AS+ +V + LE P PT + +L+ G+W L +T+
Sbjct: 98 KLKEALYGTE-RGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQ 156
Query: 121 --PGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAAS--IKDG 176
P S V VE S ++ + + V N +KFS + V A ++
Sbjct: 157 LFPLLGSGSLPQLVKVEEISQ----TIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSP 212
Query: 177 KRILFQFDKAAFSFK------FLPFKF--------------------------------- 197
KR+ +FD+ LP KF
Sbjct: 213 KRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQ 272
Query: 198 -PYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKK 241
P +P R D A+ WL TTYL LRISRG+ + FVL K+
Sbjct: 273 PPLKIPIRT--DNAESWLLTTYL--DDELRISRGDGSSIFVLFKE 313
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 49/223 (21%)
Query: 65 LIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTRPGT 123
L+D+ G RG +A++ ++ + LE P PT + +L+ +W L++T+ G
Sbjct: 103 LVDSFYGTD-RGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGL 161
Query: 124 ASPIQRTFVGVETFSVFQEIS--LRTNDPRVSNIVKFSEAIGELKVEAAAS--IKDGKRI 179
+ R G + +EIS + + + V N ++F+ + + A ++ KR+
Sbjct: 162 FPLLSR---GTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRV 218
Query: 180 LFQFDKAAF-------------SFKFL-------PFKFPY------------------PV 201
+F++ + +FL PFK P+
Sbjct: 219 QIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPL 278
Query: 202 PFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 244
F + A+ WL TTYL +LRISR + G+ FV K+ P
Sbjct: 279 KFSISNSNAQSWLLTTYL--DEDLRISRADAGSVFVFIKEGSP 319
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 84/210 (40%), Gaps = 48/210 (22%)
Query: 75 RGRSASARQLNDVECAVKVLEGLQGVPDPTGSS-LIEGRWQLMFTTRPGTASPIQRTFVG 133
RG SAS+ ++ + LE P P + L+ G+W L++T+ G + R
Sbjct: 116 RGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRR--- 172
Query: 134 VETFSVFQEIS--LRTNDPRVSNIVKFSEAIG--ELKVEAAASIKDGKRILFQFDKAAFS 189
+ EIS + ++ V N V+F+ + L A ++ KR+ +F++
Sbjct: 173 ISPLVKVDEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIG 232
Query: 190 FKFL--------------------PFKFPY------------------PVPFRLLGDEAK 211
L P K P+ F L GD A+
Sbjct: 233 TPQLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQ 292
Query: 212 GWLDTTYLSPSGNLRISRGNKGTTFVLQKK 241
WL TTYL +LRISRG+ G+ FVL ++
Sbjct: 293 SWLLTTYL--DKDLRISRGDGGSVFVLIRE 320
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 83/218 (38%), Gaps = 46/218 (21%)
Query: 65 LIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTRPGT 123
L+D+ G RG S ++ + LE P PT + +L+ G+W L +TT G
Sbjct: 103 LVDSFYGTD-RGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGL 161
Query: 124 ASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAAS--IKDGKRILF 181
+ R V+ + Q I + + V N V+FS + + A ++ R+
Sbjct: 162 FPLLSRNLPLVKVEEISQTID--SENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHI 219
Query: 182 QFDKAAF--------------------SFKFLPFKFPY------------------PVPF 203
+F++ F PF P+ F
Sbjct: 220 KFEEGVIGTPQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKF 279
Query: 204 RLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKK 241
+ + WL TTYL +LRISRG+ G+ FVL K+
Sbjct: 280 SISNTRVESWLLTTYLD--EDLRISRGDGGSVFVLLKE 315
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 16/193 (8%)
Query: 62 ENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGS-SLIEGRWQLMFTTR 120
+ +L +AL GI + + ++E VK+LE P+PTG I G W+L+++T
Sbjct: 87 KEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLIYSTI 146
Query: 121 PGTASPIQRTFVGVETF----SVFQEISLRTNDPRVSNIVKFSE-----AIGELKVEAAA 171
S +RT +G+ F + Q+I + + +++KF GE ++ A+
Sbjct: 147 TVLGS--KRTKLGLRDFVSLGDLLQQIDIAQG--KTVHVLKFDVRGLNLLDGEFRIVASF 202
Query: 172 SIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGN 231
I + ++ + L F + L +G + +YL +L++ R
Sbjct: 203 KISSKSSVEITYESSTIKPDQLMNIFRKNMDLLLGIFNPEGLFEISYLDE--DLQVGRDG 260
Query: 232 KGTTFVLQKKTEP 244
KG FVL++ +P
Sbjct: 261 KGNVFVLERIEKP 273
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 49/220 (22%)
Query: 65 LIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSS-LIEGRWQLMFTTRPGT 123
L D+L G RG S S+ ++ + LE P P + L+ G+W L +T+ G
Sbjct: 98 LADSLYGTD-RGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGL 156
Query: 124 ASPIQRTFVGVETFSVFQEIS--LRTNDPRVSNIVKFSEAIG--ELKVEAAASIKDGKRI 179
+ R +E EIS + ++ V N V+F+ A I+ KR+
Sbjct: 157 FPLLSRR---IEPLVKVDEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRV 213
Query: 180 LFQFDKAAF-------------SFKFLPFKFPY-------------------------PV 201
+F++ S + L K P+
Sbjct: 214 QIKFEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPL 273
Query: 202 PFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKK 241
F L D + WL TTYL +LRISRG+ G+ +VL K+
Sbjct: 274 KFSLPSDNTQSWLLTTYL--DKDLRISRGDGGSVYVLIKE 311
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 62 ENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGLQGVPDPTGSSLIEGRWQLMFTTRP 121
+++L++A+ ++ RG +AS ++ + +E + +P S LI G+W+L++TT
Sbjct: 66 KHELVEAIEPLE-RGATASPDDQLLIDQLARKVEAVNPTKEPLKSDLINGKWELIYTTSA 124
Query: 122 GTASPIQRTFVGVETFSVFQEISLRT-NDPRVSNIVKFSEAIGELKVEAAASIKDGKRIL 180
+ F + + + +Q I++ T R+ ++ G+L + ++ ++
Sbjct: 125 AILQAKKPRF--LRSLTNYQCINMDTLKVQRMETWPFYNSVTGDLTPLNSKTVAVKLQV- 181
Query: 181 FQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQ 239
FK L F +P + A+G L+ TY+ LRISRG F+L+
Sbjct: 182 ---------FKILGF-----IPVKAPDGTARGELEITYV--DEELRISRGKGNLLFILK 224
>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
campestris GN=PAP3 PE=2 SV=1
Length = 360
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 9/48 (18%)
Query: 194 PFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKK 241
P K P+P G+ WL TTYL +LRISRG+ G FVL ++
Sbjct: 315 PLKLPFP------GNRGSSWLLTTYL--DKDLRISRGDGG-LFVLARE 353
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 9/48 (18%)
Query: 194 PFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKK 241
P K P+P G+ WL TTYL +LRISRG+ G FVL ++
Sbjct: 331 PLKLPFP------GNRGSSWLLTTYL--DKDLRISRGDGG-LFVLARE 369
>sp|Q941D3|PAP8_ARATH Probable plastid-lipid-associated protein 8, chloroplastic
OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1
Length = 239
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 14/145 (9%)
Query: 100 VPDPTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVK-- 157
V +P + LI G W++++ +RP + R+ +G F + I V N V
Sbjct: 105 VKEPVKNPLIFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSIN 164
Query: 158 -FSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDT 216
F G++ + D + + F+ L FK+ G E++ L
Sbjct: 165 AFGFLDGDVSLTGKLKALDSEWVQVIFEPPEIKVGSLEFKY---------GFESEVKLRI 215
Query: 217 TYLSPSGNLRISRGNKGTTFVLQKK 241
TY+ LR+ G+KG+ FV +++
Sbjct: 216 TYVDE--KLRLGLGSKGSLFVFRRR 238
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 9/48 (18%)
Query: 194 PFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKK 241
P K P P G+ WL TTYL +LRISRG+ G FVL ++
Sbjct: 313 PLKIPIP------GERTSSWLITTYL--DKDLRISRGDGG-LFVLARE 351
>sp|A7IHP6|HSLU_XANP2 ATP-dependent protease ATPase subunit HslU OS=Xanthobacter
autotrophicus (strain ATCC BAA-1158 / Py2) GN=hslU PE=3
SV=1
Length = 435
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 43 GLVAQSSLTDQQQLAFTGEENQLIDALIGIQG--------RGRSASARQLNDVECAVKVL 94
GLV ++ D Q A EN+++DAL+G R R A +L+D E ++V
Sbjct: 109 GLVREARRKDVQAKAHLAAENRVLDALVGATASPATRDAFRKR-LRAGELDDKEVEIEVQ 167
Query: 95 EGLQGVP 101
G QG+P
Sbjct: 168 AGGQGMP 174
>sp|Q88ND4|ALGF_PSEPK Alginate biosynthesis protein AlgF OS=Pseudomonas putida (strain
KT2440) GN=algF PE=3 SV=1
Length = 215
Score = 32.0 bits (71), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 38 QNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNDVECAVKVLEGL 97
+N+ LV +L+DQQ T + + + GRG R++N V+ + + +G
Sbjct: 120 KNKQKALVRVQNLSDQQLTLKTADGKTEVVKPVAANGRGE----REINPVKVNLALYQGD 175
Query: 98 QGVPDPTGSSLIEGRWQLMFTTRPGTA-SPI 127
+ V D +L G +++ T G A SP+
Sbjct: 176 KKVGDVKPVALERGEAAVLYVTGSGNALSPV 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,641,454
Number of Sequences: 539616
Number of extensions: 4783562
Number of successful extensions: 13361
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 13341
Number of HSP's gapped (non-prelim): 27
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)