BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019231
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/289 (79%), Positives = 253/289 (87%), Gaps = 12/289 (4%)
Query: 60 NDNGRAE------DWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRS 113
ND G A W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S
Sbjct: 140 NDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 199
Query: 114 RDVLAKYSAV---ANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDL 170
+ V+AKYSA+ A G V DDKELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++
Sbjct: 200 QHVVAKYSALGAAAQGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 259
Query: 171 EQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
EQSLQSLTGVSPGE GATMSDD+++QV+SD N FDG LD +GFGPL+PTESERSLM
Sbjct: 260 EQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGLD---VLGFGPLIPTESERSLM 316
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEED 290
ERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPTEED
Sbjct: 317 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEED 376
Query: 291 KARLVQETGLQLKQINNWFINQRKRNWHANPSSSTASKSKRKSNAGKSS 339
KARLVQETGLQLKQINNWFINQRKRNWH+NPSSST K+KRKSNAG +S
Sbjct: 377 KARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRKSNAGDNS 425
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/278 (80%), Positives = 253/278 (91%), Gaps = 6/278 (2%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
AE W+ + KAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYS +
Sbjct: 115 AERWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLE 174
Query: 125 NGRVL---DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVS 181
+ L DDKELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQS TGVS
Sbjct: 175 AAQGLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVS 234
Query: 182 PGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
PGE TGATMS+D+++QV+SD + FDGSLDG +GFGPLVPTESERSLMERVR ELKHEL
Sbjct: 235 PGEGTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHEL 291
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQ 301
KQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WW SH+KWPYPTEEDKARLVQETGLQ
Sbjct: 292 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQ 351
Query: 302 LKQINNWFINQRKRNWHANPSSSTASKSKRKSNAGKSS 339
LKQINNWFINQRKRNWH+NPSSST SK+KR+SNAG++S
Sbjct: 352 LKQINNWFINQRKRNWHSNPSSSTVSKNKRRSNAGENS 389
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/266 (82%), Positives = 243/266 (91%), Gaps = 3/266 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+CKAEI+ HPLYEQLLSAHV+CLRIATPVDQLP+IDAQL++S+ V+AKYSA+A DD
Sbjct: 107 RCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDD 166
Query: 132 -KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ELDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SPGE TGATM
Sbjct: 167 GRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATM 226
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
SD ++DQ DS+ N +D SLDG D+MGFG +PTESERSLMERVR ELKHELKQGYKEK++
Sbjct: 227 SDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLI 284
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 310
DIREEILRKRRAGKLPGDTTS LKAWW SHAKWPYPTEEDKARLVQETGLQLKQINNWFI
Sbjct: 285 DIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 344
Query: 311 NQRKRNWHANPSSSTASKSKRKSNAG 336
NQRKRNWH+NPSSST+ K+KRKSNAG
Sbjct: 345 NQRKRNWHSNPSSSTSVKTKRKSNAG 370
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/325 (71%), Positives = 265/325 (81%), Gaps = 18/325 (5%)
Query: 26 WLNNAVRHHHHQNNDDDDDDEEEAPKNNKNNSASNDNG------------------RAED 67
WL+ + R H+N+ D +DD A + + S+D+ +
Sbjct: 102 WLSQSHRPILHRNHSDVNDDVTVAGDSMIAAALSHDSADLKPDSILNKNEGGGGDGGVMN 161
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
W+ + KAEI+ HPLYE LLSAHV+CLRIATPVDQLP+IDAQL++S++V+AKYSA+ NG
Sbjct: 162 WQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGM 221
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
V DDKELDQFM +YVLLL SFKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGE T
Sbjct: 222 VGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTS 281
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
ATMSDD++DQVDSD N FD ++G DSMGFGPL+PTESERSLMERVR ELKHELKQGYKE
Sbjct: 282 ATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKE 341
Query: 248 KIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINN 307
KIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPTEEDKARLVQETGLQLKQINN
Sbjct: 342 KIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINN 401
Query: 308 WFINQRKRNWHANPSSSTASKSKRK 332
WFINQRKRNWH+NPS+ST KSKRK
Sbjct: 402 WFINQRKRNWHSNPSTSTVLKSKRK 426
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/255 (86%), Positives = 239/255 (93%), Gaps = 1/255 (0%)
Query: 68 WETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR 127
WE KCKA+I+ HPLY+QLLSAHVSCLRIATPVDQLP+IDAQL++S++V+AKYS + G+
Sbjct: 158 WEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ 217
Query: 128 V-LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
LDDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQSLQSLTGV+PGE T
Sbjct: 218 PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGT 277
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
GATMSDDD+DQ DSDTNF DG DGPDSMGFGPLVPTESERSLMERVR ELKHELKQGYK
Sbjct: 278 GATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYK 337
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQIN 306
EKIVDIREEILRKRRAGKLPGDTTS+LKAWW SH+KWPYPTEEDKARLVQETGLQLKQIN
Sbjct: 338 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQIN 397
Query: 307 NWFINQRKRNWHANP 321
NWFINQRKRNWH+NP
Sbjct: 398 NWFINQRKRNWHSNP 412
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/276 (72%), Positives = 234/276 (84%), Gaps = 4/276 (1%)
Query: 65 AEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVA 124
EDW + KA I+ HP+YEQLL+AHV+CLR+ATPVDQ+P+IDAQLS+ V AKYS +
Sbjct: 110 GEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL- 168
Query: 125 NGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
G V+D+KELD FM+HYV+LL SFKEQLQ HV VHAMEA+ ACW++EQSLQSLTGVSP E
Sbjct: 169 -GVVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSE 227
Query: 185 STGATMSDDDED-QVDSDTNFFDGSLDGPDS-MGFGPLVPTESERSLMERVRHELKHELK 242
S G TMSDD++D QV+S+ N FDGSLDG D MGFGPLVPTE ERSLMERV+ ELKHELK
Sbjct: 228 SNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELK 287
Query: 243 QGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQL 302
QG+KEKIVDIREEI+RKRRAGKLPGDTTS+LK WW +H+KWPYPTEEDKA+LVQETGLQL
Sbjct: 288 QGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQL 347
Query: 303 KQINNWFINQRKRNWHANPSSSTASKSKRKSNAGKS 338
KQINNWFINQRKRNW++N S+S+ ++ GKS
Sbjct: 348 KQINNWFINQRKRNWNSNSSTSSTLTKNKRKRTGKS 383
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/269 (73%), Positives = 224/269 (83%), Gaps = 2/269 (0%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-K 132
KA + HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA SA A +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGGE 102
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVM CW+LEQSLQSLTG SPGE TGATMSD
Sbjct: 103 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSD 162
Query: 193 DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDI 252
D+++QVDS+ N FDG+ DG D MGFGPL+ TE ERSL+ERVRHELK+ELKQGYKEK+VDI
Sbjct: 163 DEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDI 221
Query: 253 REEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQ 312
REEILRKRRAGKLPGDT S+LKAWW +H+KWPYPTE+DKARLVQETGLQLKQINNWFINQ
Sbjct: 222 REEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQ 281
Query: 313 RKRNWHANPSSSTASKSKRKSNAGKSSNE 341
RKRNWH+NP+SS K+++ G E
Sbjct: 282 RKRNWHSNPASSGEKTKKKRNVTGDGGAE 310
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/254 (74%), Positives = 215/254 (84%), Gaps = 6/254 (2%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD-- 131
KA I HPLYE+LL AHV+CLR+ATPVDQLP+IDAQ++ LA +A A
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 132 ---KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGA 188
+ELD FMTHYVLLL SFKEQLQQHVRVHAMEAVMACW+LEQ+LQSLTG SP E +GA
Sbjct: 108 SGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGA 167
Query: 189 TMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
TMSDD+++QVDS++N FDG+ DG D MGFGPL+ TE ERSL+ERVR ELKHELKQGY+EK
Sbjct: 168 TMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREK 226
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNW 308
+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPTEEDKARLVQETGLQLKQINNW
Sbjct: 227 LVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNW 286
Query: 309 FINQRKRNWHANPS 322
FINQRKRNWH+NP+
Sbjct: 287 FINQRKRNWHSNPA 300
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 361 bits (926), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 175/264 (66%), Positives = 210/264 (79%), Gaps = 4/264 (1%)
Query: 72 KCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDD 131
+ K EI HP+YEQLL+AHV+CLR+ATP+DQLP I+AQLS+S +L Y++ A G D
Sbjct: 28 QLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDR 87
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATMS
Sbjct: 88 HELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMS 147
Query: 192 DDDED---QVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEK 248
+D++D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K +
Sbjct: 148 EDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSR 206
Query: 249 IVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNW 308
I D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPTE+DKA+LV+ETGLQLKQINNW
Sbjct: 207 IEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNW 266
Query: 309 FINQRKRNWHANPSSSTASKSKRK 332
FINQRKRNWH N S T+ KSKRK
Sbjct: 267 FINQRKRNWHNNSHSLTSLKSKRK 290
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 357 bits (916), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 176/263 (66%), Positives = 212/263 (80%), Gaps = 5/263 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK- 132
K EI HP+Y+QLL+AHV+CLR+ATP+DQLP I+AQLS S +L Y++ A G D+
Sbjct: 32 KGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGFSHHDRQ 91
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD 192
ELD F+ YV++L SFKEQLQQHVRVHA+EAVMAC ++E +L SLTG + GE +GATMS+
Sbjct: 92 ELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSE 151
Query: 193 DDED-QVD--SDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKI 249
D++D Q+D SD + D S G D GFGPL+PTESERSLMERVR ELK ELKQG+K +I
Sbjct: 152 DEDDLQMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRI 210
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWF 309
D+REEI+RKRRAGKLPGDTT++LK WW H KWPYPTE+DKA+LV+ETGLQLKQINNWF
Sbjct: 211 EDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWF 270
Query: 310 INQRKRNWHANPSSSTASKSKRK 332
INQRKRNWH N S T+ KSKRK
Sbjct: 271 INQRKRNWHNNSHSLTSLKSKRK 293
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 347 bits (890), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 205/261 (78%), Gaps = 3/261 (1%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL--DD 131
K EI HPL EQL++AHV CLR+ATP+D LP IDAQL++S +L Y+A + D
Sbjct: 54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 113
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
+ELD F+ Y++LL SF+EQLQQHVRVHA+EAVMAC ++EQSLQ LTG + E TGATMS
Sbjct: 114 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 173
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+D+++ D DG D MGFGPL+PT+SERSLMERVR ELK ELKQG+K +I D
Sbjct: 174 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 233
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFIN 311
+REEILRKRRAGKLPGDTT++LK WW H+KWPYPTE+DKA+LV+ETGLQLKQINNWFIN
Sbjct: 234 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFIN 293
Query: 312 QRKRNWHANPSSSTASKSKRK 332
QRKRNWH N +ST KSKRK
Sbjct: 294 QRKRNWHNNSQTSTL-KSKRK 313
>sp|P56660|KNOX2_MAIZE Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2
PE=2 SV=1
Length = 88
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 83/88 (94%)
Query: 233 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKA 292
VR ELKHELKQGY++K+VDIREEILRKRRAGKLPGDT S LKAWW +H+KWPYPTEEDKA
Sbjct: 1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKA 60
Query: 293 RLVQETGLQLKQINNWFINQRKRNWHAN 320
RLVQETGLQLKQINNWFINQRKRNWH N
Sbjct: 61 RLVQETGLQLKQINNWFINQRKRNWHNN 88
>sp|P56665|KNOX7_MAIZE Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7
PE=2 SV=1
Length = 85
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 83/85 (97%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPTE+DKARLV
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 296 QETGLQLKQINNWFINQRKRNWHAN 320
QETGLQLKQINNWFINQRKRNWH+N
Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>sp|P56664|KNOX6_MAIZE Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6
PE=2 SV=1
Length = 85
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 83/85 (97%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT S+LKAWW +H+KWPYPTE+DKARLV
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 296 QETGLQLKQINNWFINQRKRNWHAN 320
QETGLQLKQINNWFINQRKRNWH+N
Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>sp|P56659|KNOX1_MAIZE Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1
PE=2 SV=1
Length = 88
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 80/88 (90%)
Query: 233 VRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKA 292
VR ELK ELKQG+K +I D+REEILRKRRAGKLPGDTTS+LK WW H+KWPYPTE+DKA
Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKA 60
Query: 293 RLVQETGLQLKQINNWFINQRKRNWHAN 320
+LV+ETGLQLKQINNWFINQRKRNWH N
Sbjct: 61 KLVEETGLQLKQINNWFINQRKRNWHNN 88
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 131/251 (52%), Gaps = 32/251 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDVLAKYSAVANGRVLDDK 132
KA+I GHP Y LLSA++ C ++ P P++ + L R+ A G++ D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEVASLLKEIGRERRAGGGGGGAGQIGVDP 99
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGVSPGESTGATMS 191
ELD+FM Y +L +KE+L + EA ++ L +L +G + +T AT S
Sbjct: 100 ELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGATSPPATTATHS 155
Query: 192 DD-----DEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
D+ DEDQ +T+ D + E L + HELK L + Y
Sbjct: 156 DEMVGSSDEDQCSGETDMLD--------------IGQEQSSRLAD---HELKEMLLKKYS 198
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQIN 306
+ +R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL TGL KQIN
Sbjct: 199 GCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQIN 258
Query: 307 NWFINQRKRNW 317
NWFINQRKR+W
Sbjct: 259 NWFINQRKRHW 269
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 127/281 (45%), Gaps = 73/281 (25%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDK 132
KAEI+ HP Y LL+A++ C ++ P D VL K +AV + LD+
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPPD--------------VLTKLTAVPAAQQLDEA 128
Query: 133 -----------------ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQ 175
+LDQFM Y +L ++E+L++ + +EA +E L
Sbjct: 129 DGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLD 184
Query: 176 SLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRH 235
SL S E TG++ +E+Q SD
Sbjct: 185 SLA-ESNCEGTGSS----EEEQDPSDK--------------------------------- 206
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
+LKH+L + Y + D+R+ ++ + GKLP + L WW H KWPYP+E +K L
Sbjct: 207 QLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPSEMEKMTLA 266
Query: 296 QETGLQLKQINNWFINQRKRNWHANPSSSTASKSKRKSNAG 336
Q TGL KQINNWFINQRKR+W P + TA + + G
Sbjct: 267 QTTGLDQKQINNWFINQRKRHWKPTPVAGTAFPTMEAAGGG 307
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 119/246 (48%), Gaps = 25/246 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--D 131
KA+I GHP Y LLSA++ C ++ P P++ L A D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L +KE+L + EA + L SL G +P +
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPT-----D 162
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+ DE S+ G D D FG E L + HELK L + Y +
Sbjct: 163 NSDEMVGSSEDEPCSGDADAAD---FG----QEHSSRLAD---HELKEMLLKKYSGCLSR 212
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFIN 311
+R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL TGL KQINNWFIN
Sbjct: 213 LRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFIN 272
Query: 312 QRKRNW 317
QRKR+W
Sbjct: 273 QRKRHW 278
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 119/246 (48%), Gaps = 25/246 (10%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--D 131
KA+I GHP Y LLSA++ C ++ P P++ L A D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
ELD+FM Y +L +KE+L + EA + L SL G +P +
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPT-----D 162
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+ DE S+ G D D FG E L + HELK L + Y +
Sbjct: 163 NSDEMVGSSEDEPCSGDADAAD---FG----QEHSSRLAD---HELKEMLLKKYSGCLSR 212
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFIN 311
+R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL TGL KQINNWFIN
Sbjct: 213 LRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFIN 272
Query: 312 QRKRNW 317
QRKR+W
Sbjct: 273 QRKRHW 278
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 138/266 (51%), Gaps = 31/266 (11%)
Query: 54 KNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR- 112
K S+ + A D E +K K I+ HP Y LL+A++ C ++ P P++ A+L+
Sbjct: 87 KAKEPSSSSPYAGDVEAIKAK--IISHPHYYSLLTAYLECNKVGAP----PEVSARLTEI 140
Query: 113 SRDVLAKY-SAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLE 171
+++V A+ +A+ + ELDQFM Y +L F+E+L + ++ AME +
Sbjct: 141 AQEVEARQRTALGGLAAATEPELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMRRVESQL 199
Query: 172 QSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLME 231
SL S++G S + S++D++ +T + G D
Sbjct: 200 NSL-SISGRSLRNILSSGSSEEDQEGSGGETELPEVDAHGVD------------------ 240
Query: 232 RVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDK 291
ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+E K
Sbjct: 241 ---QELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPSETQK 297
Query: 292 ARLVQETGLQLKQINNWFINQRKRNW 317
L + TGL LKQINNWFINQRKR+W
Sbjct: 298 VALAESTGLDLKQINNWFINQRKRHW 323
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 139/273 (50%), Gaps = 34/273 (12%)
Query: 47 EEAPKNNKNNSASNDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKI 106
E K K S+S+ A D E +K K I+ HP Y LL+A++ C ++ P P++
Sbjct: 87 EACAKAAKEPSSSS---YAADVEAIKAK--IISHPHYSSLLAAYLDCQKVGAP----PEV 137
Query: 107 DAQLSR-SRDV-LAKYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV 164
A+L+ ++D+ L + +A+ + ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 138 SARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAM 193
Query: 165 MACWDLEQSLQSLTGVSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTE 224
+E L SL+ + +EDQ S G + P+ G
Sbjct: 194 EFLRRVETQLNSLSISGRSLRNILSTGSSEEDQEGSG-----GETELPEIDAHG------ 242
Query: 225 SERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWP 284
V ELKH L + Y + +++E+ +K++ GKLP + L +WW H KWP
Sbjct: 243 --------VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWP 294
Query: 285 YPTEEDKARLVQETGLQLKQINNWFINQRKRNW 317
YP+E K L + TGL LKQINNWFINQRKR+W
Sbjct: 295 YPSESQKVALAESTGLDLKQINNWFINQRKRHW 327
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 127/257 (49%), Gaps = 33/257 (12%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
ET KA+I+ HPLY LL A + C ++ P P++ +LS + + + A R
Sbjct: 58 ETDAIKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSA---LAGELDSRAEDRY 110
Query: 129 L----DDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGE 184
L D ELD+FM Y+ +L S++++L + ++ EA ++E + S T +
Sbjct: 111 LQGQSSDPELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFT-LDDNG 165
Query: 185 STGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
S G S+D+++ D S G + +E ELK L
Sbjct: 166 SEGGNSSEDEQEAGGGDMA----------SAGLPEITSPCAED-------KELKSHLLNK 208
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQ 304
Y + + E+ +K++ GKLP D L WW H +WPYP+E +KA L + TGL KQ
Sbjct: 209 YSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQ 268
Query: 305 INNWFINQRKRNWHANP 321
INNWFINQRKR+W P
Sbjct: 269 INNWFINQRKRHWKPTP 285
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 131/267 (49%), Gaps = 34/267 (12%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y LL A++ C R+ P D + ++ ++R +
Sbjct: 119 NDDHSLSSNEVEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLS--VARQEFEARQ 176
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 177 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 232
Query: 180 ---------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
SP E + +E+Q +S G + P+ + P +R
Sbjct: 233 NNNAPPLRIFSPSEDKCEGIGSSEEEQENSG-----GETEVPE------IDPRAEDR--- 278
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEED 290
ELK+ L + Y + +++E+ +K++ GKLP D L +WW H KWPYP+E +
Sbjct: 279 -----ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESE 333
Query: 291 KARLVQETGLQLKQINNWFINQRKRNW 317
K L + TGL KQINNWFINQRKR+W
Sbjct: 334 KVALAESTGLDQKQINNWFINQRKRHW 360
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 132/267 (49%), Gaps = 34/267 (12%)
Query: 60 NDNGRAEDWETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAK 119
ND+ E KA+I+ HP Y L+ A++ C R+ P D +P++ ++R +
Sbjct: 120 NDDHSLSSNEVEAIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLS--VARQEFEARQ 177
Query: 120 YSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTG 179
S+ + D ELDQFM Y +L ++E+L + ++ EA+ +E L L
Sbjct: 178 RSSGTSRETSKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGN 233
Query: 180 ---------VSPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLM 230
SP E + +++Q +S G + P+ + P +R
Sbjct: 234 NNNAPPLRIFSPSEDKCEGIGSSEDEQENSG-----GETEVPE------IDPRAEDR--- 279
Query: 231 ERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEED 290
ELK+ L + Y + +++E+ +K++ GKLP + L +WW H KWPYP+E +
Sbjct: 280 -----ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESE 334
Query: 291 KARLVQETGLQLKQINNWFINQRKRNW 317
K L + TGL KQINNWFINQRKR+W
Sbjct: 335 KVALAESTGLDQKQINNWFINQRKRHW 361
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 38/276 (13%)
Query: 51 KNNKNNSASNDNGRAEDWETVKC-KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQ 109
+N+ ++S G A E ++ KA+I+ HP LL A++ C ++ P P++ A+
Sbjct: 71 RNHHHDSTETSGGGAGAGEVIEALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVAAR 126
Query: 110 LSRSRDVLA--KYSAVANGRVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMAC 167
LS R + ++ + V D ELDQFM Y +L ++E+L + ++ EA+
Sbjct: 127 LSAVRQEFEARQRRSLTDRDVSKDPELDQFMEAYYDMLVKYREELTRPLQ----EAMEFM 182
Query: 168 WDLEQSLQSLTGV------SPGESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLV 221
+E L L S + G S++D+D +T P+ +
Sbjct: 183 QKIEAQLNMLGNAPVRIFNSEDKCEGVGSSEEDQDNSGGETEL-------PE------ID 229
Query: 222 PTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHA 281
P +R ELK+ L + Y + +++E+ +K++ GKLP D L WW H
Sbjct: 230 PRAEDR--------ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHY 281
Query: 282 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 317
KWPYP+E +K L + TGL KQINNWFINQRKR+W
Sbjct: 282 KWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 317
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 130/254 (51%), Gaps = 38/254 (14%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDA--QLSRSRDVLAKYSAVANGRVLDD 131
KA+I+ HP Y LL A++ C +I P D + +I A Q +R + S A+ R D
Sbjct: 135 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR---D 191
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAV--------MACWDLEQSLQSLTGVSPG 183
ELDQFM Y +L ++E+L + ++ AME + M C QS + G
Sbjct: 192 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIRRIESQLSMLC----QSPIHILNNPDG 246
Query: 184 ESTGATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQ 243
+S SD++++ N G + P+ + P +R ELK+ L +
Sbjct: 247 KSDNMGSSDEEQE------NNSGGETELPE------IDPRAEDR--------ELKNHLLK 286
Query: 244 GYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLK 303
Y + +++E+ +K++ GKLP + L WW H KWPYP+E +K L + TGL K
Sbjct: 287 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQK 346
Query: 304 QINNWFINQRKRNW 317
QINNWFINQRKR+W
Sbjct: 347 QINNWFINQRKRHW 360
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 131/247 (53%), Gaps = 29/247 (11%)
Query: 73 CKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-SRDV-LAKYSAVANGRVLD 130
KA+I+ HP Y LL+A++ C ++ P P++ A+L+ ++D+ L + +A+
Sbjct: 104 IKAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLTAVAQDLELRQRTALGVLGAAT 159
Query: 131 DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATM 190
+ ELDQFM Y +L ++E+L + ++ AME + + + + S++G S +
Sbjct: 160 EPELDQFMEAYHEMLVKYREELTRPLQ-EAMEFLRRV-ETQLNTLSISGRSLRNILSSGS 217
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S++D++ +T + G D ELKH L + Y +
Sbjct: 218 SEEDQEGSGGETELPEIDAHGVD---------------------QELKHHLLKKYSGYLS 256
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 310
+++E+ +K++ GKLP D L WW H KWPYP+E K L + TGL LKQINNWFI
Sbjct: 257 SLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFI 316
Query: 311 NQRKRNW 317
NQRKR+W
Sbjct: 317 NQRKRHW 323
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 30/246 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I+ HP Y +LL+A+V+C ++ P + + +++ + + + +A + + +D
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGEDPA 184
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP--GESTGATMS 191
LDQFM Y +L ++++L + ++ EA++ +E ++LT S + G +
Sbjct: 185 LDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSSDFASNEGGDRN 240
Query: 192 DDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
E+ VD N D P +R +LK +L + Y +
Sbjct: 241 GSSEEDVDLH-NMID---------------PQAEDR--------DLKGQLLRKYSGYLGS 276
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFIN 311
+++E ++KR+ GKLP + L WW H KWPYP+E K L + TGL KQINNWFIN
Sbjct: 277 LKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFIN 336
Query: 312 QRKRNW 317
QRKR+W
Sbjct: 337 QRKRHW 342
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 119/259 (45%), Gaps = 43/259 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLD--- 130
KA+I+ HPLY LL A V C ++ P P++ +LS S V+ + R L
Sbjct: 72 KAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLS-SLAVVTDVPQYSGDRCLPAQQ 126
Query: 131 ---DKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L + ++L + ++++ + G+
Sbjct: 127 PAADPELDQFMETYCYMLTRYGQELAR--------------PIQEAEEFFRGI------- 165
Query: 188 ATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKE 247
E+Q+DS D S D D + G +P +S V + L Y
Sbjct: 166 -------EEQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKYSG 216
Query: 248 KIVDIREEILRKRR--AGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQI 305
+ + EI K++ G LP D L WW H +WPYP+E +KA L + TGL KQ+
Sbjct: 217 YLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQV 276
Query: 306 NNWFINQRKRNWHANPSSS 324
NWFINQRKR+W P+++
Sbjct: 277 TNWFINQRKRHWKPKPAAA 295
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 124/247 (50%), Gaps = 35/247 (14%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGR-VLDDKELDQ 136
V HP Y LL+A++ C ++ P D L ++ A + AK A A GR D ELDQ
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDASAAGRHEPRDPELDQ 147
Query: 137 FMTHYVLLLYSFKEQLQQHV-----RVHAMEAVMACWDLEQSLQ-SLTGVSPGESTGATM 190
FM Y +L ++E+L + + + +EA + C + ++ G+S G
Sbjct: 148 FMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLADGKSEGVGS 207
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S+DD D +G + P P + +E ELK++L + Y +
Sbjct: 208 SEDDMDP--------NGRENDP------PEIDPRAEDK-------ELKYQLLKKYSGYLS 246
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 310
+R+E +K++ GKLP + L WW H KWPYP+E +K L + TGL KQINNWFI
Sbjct: 247 SLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFI 306
Query: 311 NQRKRNW 317
NQRKR+W
Sbjct: 307 NQRKRHW 313
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 129/246 (52%), Gaps = 34/246 (13%)
Query: 78 VGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKELDQF 137
+ HP Y +LL+A+++C +I P + + +++ + S + S+ G + +D LDQF
Sbjct: 101 MAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQF 160
Query: 138 MTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMSD----- 192
M Y +L ++++L + + EA++ +E ++LT ++P S + + +
Sbjct: 161 MEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALT-LAPNSSHESALGEAMDRN 215
Query: 193 -DDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVD 251
+++VD + +F D P +R ELK +L + Y +
Sbjct: 216 GSSDEEVDVNNSFID---------------PQAEDR--------ELKGQLLRKYSGYLGS 252
Query: 252 IREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFIN 311
+++E ++KR+ GKLP + L WWL H KWPYP+E K L + TGL KQINNWFIN
Sbjct: 253 LKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFIN 312
Query: 312 QRKRNW 317
QRKR+W
Sbjct: 313 QRKRHW 318
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 124/252 (49%), Gaps = 40/252 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSR-----SRDV--LAKYSAVANG 126
K++I HPLY +LL ++ C ++ P+ ++ I ++ R RDV L+ + A
Sbjct: 70 KSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSCFGA---- 124
Query: 127 RVLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEST 186
D ELD+FM Y +L +K L + EA +E LQ+L G ++
Sbjct: 125 ----DPELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT---GPAS 173
Query: 187 GATMSDDDEDQVDSDTNFF-DGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
+SDD V SD D + DS +RS +LK +L + +
Sbjct: 174 ATALSDDG--AVSSDEELREDDDIAADDS----------QQRS----NDRDLKDQLLRKF 217
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQI 305
I ++ E +K++ GKLP + L WW H KWPYPTE DK L +ETGL KQI
Sbjct: 218 GSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQI 277
Query: 306 NNWFINQRKRNW 317
NNWFINQRKR+W
Sbjct: 278 NNWFINQRKRHW 289
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 121/247 (48%), Gaps = 30/247 (12%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVLDDKE 133
KA+I HP Y +LL A++ C ++ P ++ + ++ R DV K V + D E
Sbjct: 86 KAKIACHPSYPRLLQAYIDCQKVGAP-PEIACLLEEIQRESDVY-KQEVVPSSCFGADPE 143
Query: 134 LDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSL-TGV--SPGESTGATM 190
LD+FM Y +L +K L + EA +E L++L TGV + G S +
Sbjct: 144 LDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSEDGVI 199
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S D+E L G D V + + +R +LK L + + +I
Sbjct: 200 SSDEE-------------LSGGDHE-----VAEDGRQRCEDR---DLKDRLLRKFGSRIS 238
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 310
++ E +K++ GKLP + L WW H KWPYPTE DK L TGL KQINNWFI
Sbjct: 239 TLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFI 298
Query: 311 NQRKRNW 317
NQRKR+W
Sbjct: 299 NQRKRHW 305
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 131/253 (51%), Gaps = 40/253 (15%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN--GRVLDD 131
KA+I+ HP Y +LL+A+V+C ++ P P++ A+L + A +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 132 KELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTGATMS 191
LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G +
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 233
Query: 192 DDD-------EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQG 244
D E++VD + F D P +R ELK +L +
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 270
Query: 245 YKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQ 304
Y + +++E ++KR+ GKLP + L WW H KWPYP+E+ K L + TGL KQ
Sbjct: 271 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQ 330
Query: 305 INNWFINQRKRNW 317
INNWFINQRKR+W
Sbjct: 331 INNWFINQRKRHW 343
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 39/256 (15%)
Query: 70 TVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVAN--GR 127
++ KA+I+ HP Y +LL A+V+C ++ P P++ A+L + A +A G
Sbjct: 120 SLLVKAKIMAHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTGS 175
Query: 128 VLDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSP---GE 184
+ +D LDQFM Y +L ++++L + + EA++ +E +SL+ SP G
Sbjct: 176 LGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSSLGY 231
Query: 185 STGATMSDDD---EDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHEL 241
A +++ E++VD + F D P +R ELK +L
Sbjct: 232 GEAAIERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQL 268
Query: 242 KQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQ 301
+ Y + +++E ++KR+ GKLP + L WW H KWPYP+E+ K L + TGL
Sbjct: 269 LRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLD 328
Query: 302 LKQINNWFINQRKRNW 317
KQINNWFINQRKR+W
Sbjct: 329 QKQINNWFINQRKRHW 344
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 87 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 139
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L ++E+L + + AME + ++ S
Sbjct: 140 DARDPELDQFMEAYCNMLAKYREELTRPID-EAMEFLKRVESQLDTIAGGAHGGGAGSAR 198
Query: 188 ATMSDDDEDQVDSDTNFFD--GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
++D + V S + D G + P P + +E ELK +L + Y
Sbjct: 199 LLLADGKSECVGSSEDDMDPSGRENEP------PEIDPRAEDK-------ELKFQLLKKY 245
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQI 305
+ +R+E +K++ GKLP + L WW H KWPYP+E +K L + TGL KQI
Sbjct: 246 SGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQI 305
Query: 306 NNWFINQRKRNW 317
NNWFINQRKR+W
Sbjct: 306 NNWFINQRKRHW 317
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 69 ETVKCKAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRV 128
E KA+I+ HP Y LL+A++ C ++ P + L ++ A AK A GR
Sbjct: 87 EAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH 139
Query: 129 -LDDKELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGESTG 187
D ELDQFM Y +L ++E+L + + AME + ++ S
Sbjct: 140 DARDPELDQFMEAYCNMLAKYREELTRPID-EAMEFLKRVESQLDTIAGGAHGGGAGSAR 198
Query: 188 ATMSDDDEDQVDSDTNFFD--GSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGY 245
++D + V S + D G + P P + +E ELK +L + Y
Sbjct: 199 LLLADGKSECVGSSEDDMDPSGRENEP------PEIDPRAEDK-------ELKFQLLKKY 245
Query: 246 KEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQI 305
+ +R+E +K++ GKLP + L WW H KWPYP+E +K L + TGL KQI
Sbjct: 246 SGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQI 305
Query: 306 NNWFINQRKRNW 317
NNWFINQRKR+W
Sbjct: 306 NNWFINQRKRHW 317
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 113/267 (42%), Gaps = 43/267 (16%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAV-ANGRVLDDK 132
KAEI+ HP Y LL+A++ C ++ P DVL K +AV A + LD
Sbjct: 82 KAEIMSHPQYSALLAAYLGCKKVGAP--------------PDVLTKLTAVPAAQQQLDAA 127
Query: 133 ELDQFMTHYVLLLYSFKE-QLQQHVRVHAMEAVMACWDL-EQSLQSLTGVSPGESTGATM 190
+ H + QL Q + ++ D + + L ++ G
Sbjct: 128 DGHPRRRHEPRRDDDVPDHQLDQFMHADEVQGGAGAADPGSRGVLQLDSIADSNCEGTGS 187
Query: 191 SDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
S++++D + D S +LKH+L Y +
Sbjct: 188 SEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLMKYGGSLG 222
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWW-LSHAKWPYPTEEDKARLVQETGLQLKQINNWF 309
D+R+ ++ + GKLP + L WW L + KWPYP+E +K L Q TGL KQI+NWF
Sbjct: 223 DLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWF 282
Query: 310 INQRKRNWHANPSSSTASKSKRKSNAG 336
INQRKR+W P + + + G
Sbjct: 283 INQRKRHWKPTPVAGMTFPTVEAAGGG 309
>sp|P56667|KNX10_MAIZE Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10
PE=3 SV=1
Length = 88
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
+LK+ L Y + + E+ RK++ GKLP D L WW H +WPYP+E +KA L
Sbjct: 4 DLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALA 63
Query: 296 QETGLQLKQINNWFINQRKRNW 317
+ TGL+ KQINNWFINQRKR+W
Sbjct: 64 ESTGLEAKQINNWFINQRKRHW 85
>sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11
PE=3 SV=1
Length = 88
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 56/82 (68%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL
Sbjct: 4 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 63
Query: 296 QETGLQLKQINNWFINQRKRNW 317
TGL KQINNWFINQRKR+W
Sbjct: 64 AATGLDPKQINNWFINQRKRHW 85
>sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5
PE=2 SV=1
Length = 85
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 56/82 (68%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 60
Query: 296 QETGLQLKQINNWFINQRKRNW 317
TGL KQINNWFINQRKR+W
Sbjct: 61 AMTGLDPKQINNWFINQRKRHW 82
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 74 KAEIVGHPLYEQLLSAHVSCLRIATPVDQLPKIDAQLSRSRDVLAKYSAVANGRVL-DDK 132
KA IV HP Y +LL+A + C ++ P + +I A +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPEDP 133
Query: 133 ELDQFMTHYVLLLYSFKEQLQQHVRVHAMEAVMACWDLEQSLQS------LTGVSPGEST 186
ELDQFM Y LL KE+L + ++ EA +E L S LT +
Sbjct: 134 ELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISESKA 189
Query: 187 GATMSDDDEDQVDSDTNFFDGSLDGPDSMGFGPLVPTESERSLMERVRHELKHELKQGYK 246
G SDDDE + S + + D G + P +++L K L + Y
Sbjct: 190 GLDSSDDDEHEDGSGMEMMEAAEDE----DLGIIDPRSDDKAL--------KRHLLRKYS 237
Query: 247 EKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQIN 306
+ +R+E+ +KR+ GKLP + L WW H +WP P+E +K L + TGL+ KQIN
Sbjct: 238 GYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQIN 297
Query: 307 NWFINQRKRNW 317
N FINQRKR+W
Sbjct: 298 NCFINQRKRHW 308
>sp|P56669|HLG3_MAIZE Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3
SV=1
Length = 85
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
ELK L + Y + +R E L+KR+ GKLP D ++L WW +H +WPYPTEEDK RL
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLA 60
Query: 296 QETGLQLKQINNWFINQRKRNW 317
TGL KQINNWFINQRKR+W
Sbjct: 61 AMTGLDPKQINNWFINQRKRHW 82
>sp|Q54VB4|HBX9_DICDI Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1
Length = 639
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%)
Query: 250 VDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWF 309
V I+++++ GKLPG+ TS+LK W H PYPTEE+K L T L QINNWF
Sbjct: 551 VPFTGSIVKRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWF 610
Query: 310 INQRKR 315
N R+R
Sbjct: 611 TNARRR 616
>sp|P56666|KNOX8_MAIZE Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8
PE=2 SV=1
Length = 85
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
ELKH+L + Y + +R+E ++++ GKLP + L WW H KWPYP+E +K L
Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALA 60
Query: 296 QETGLQLKQINNWFINQRKRNW 317
+ TGL KQINNWFINQRKR+W
Sbjct: 61 ETTGLDPKQINNWFINQRKRHW 82
>sp|P56661|KNOX3_MAIZE Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3
PE=2 SV=1
Length = 88
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
ELK +L + Y + ++R+E+ +KR+ KLP + L +WW H +WPYP+E +K L
Sbjct: 4 ELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALA 63
Query: 296 QETGLQLKQINNWFINQRKRNW 317
+ TGL+ KQINNWFINQRKR+W
Sbjct: 64 ESTGLEQKQINNWFINQRKRHW 85
>sp|P56662|KNOX4_MAIZE Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4
PE=2 SV=1
Length = 85
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 236 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLV 295
ELK++L + Y + +R+E +K++ GKLP + L WW H KWPYP+E +K L
Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALA 60
Query: 296 QETGLQLKQINNWFINQRKRNW 317
+ TGL KQINNWFINQRKR+W
Sbjct: 61 EATGLDQKQINNWFINQRKRHW 82
>sp|A8K0S8|ME3L2_HUMAN Putative homeobox protein Meis3-like 2 OS=Homo sapiens GN=MEIS3P2
PE=2 SV=1
Length = 358
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 310
D+ +E R ++ G P T++++AW H PYP+EE K +LVQ+TGL + Q+NNWFI
Sbjct: 238 DLDQEPRRNKKRGIFPKVATNIMRAWLFQHLWHPYPSEEQKKQLVQDTGLTILQVNNWFI 297
Query: 311 NQRKR 315
N R+R
Sbjct: 298 NARRR 302
>sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3
Length = 375
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 310
D+ +E R ++ G P T++++AW H PYP+EE K +L Q+TGL + Q+NNWFI
Sbjct: 255 DLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFI 314
Query: 311 NQRKR 315
N R+R
Sbjct: 315 NARRR 319
>sp|A6NDR6|ME3L1_HUMAN Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1
PE=5 SV=2
Length = 274
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 251 DIREEILRKRRAGKLPGDTTSLLKAWWLSHAKWPYPTEEDKARLVQETGLQLKQINNWFI 310
D+ +E R ++ G P T++++AW H PYP+EE K +L Q+TGL + Q+NNWFI
Sbjct: 154 DLDQEPRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFI 213
Query: 311 NQRKR 315
N R+R
Sbjct: 214 NARRR 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,066,115
Number of Sequences: 539616
Number of extensions: 6487764
Number of successful extensions: 61590
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 45630
Number of HSP's gapped (non-prelim): 13292
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)