Query 019234
Match_columns 344
No_of_seqs 117 out of 151
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 12:57:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019234.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019234hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cy5a1 b.55.1.2 (A:31-159) EP 17.2 1.2E+02 0.0087 22.1 5.9 42 6-52 43-84 (129)
2 d1nzia1 b.23.1.1 (A:1-117) Com 17.2 37 0.0027 24.1 2.7 20 248-269 12-31 (117)
3 d2qqma3 b.23.1.1 (A:156-263) M 16.1 51 0.0037 22.8 3.2 20 248-269 7-26 (108)
4 d2doea1 a.159.2.1 (A:784-853) 11.0 51 0.0038 22.4 1.8 20 283-302 24-43 (70)
5 d1szba1 b.23.1.1 (A:3-123) Man 10.9 73 0.0053 22.6 2.8 25 243-269 12-36 (121)
6 d1ix2a_ b.1.18.17 (A:) Copper 10.2 40 0.0029 24.2 0.9 32 4-37 8-40 (102)
7 d1hfua2 b.6.1.3 (A:132-303) La 10.0 2.5E+02 0.018 21.7 6.1 31 18-48 54-85 (172)
8 d2k54a1 d.17.4.29 (A:1-123) Un 9.6 92 0.0067 22.2 2.9 16 326-342 97-112 (123)
9 d1nt0a2 b.23.1.1 (A:165-278) M 9.0 1.2E+02 0.0086 21.2 3.3 25 243-269 12-36 (114)
10 d1d6za3 d.17.2.1 (A:186-300) C 8.4 1.4E+02 0.01 22.1 3.7 30 221-250 71-100 (115)
No 1
>d2cy5a1 b.55.1.2 (A:31-159) EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.24 E-value=1.2e+02 Score=22.15 Aligned_cols=42 Identities=12% Similarity=0.304 Sum_probs=31.0
Q ss_pred ccceEEEcCCCCeEEEecCCCCeEEEEEEeeCCCceEEEcceeccCC
Q 019234 6 KLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGGS 52 (344)
Q Consensus 6 ~~~ivi~lp~~GirL~Fd~~~QRL~lIEv~d~~~~~L~Y~~~~~~~p 52 (344)
..++.|.+...||+| .|+.++.+ ++-+.+.+ ++|++...+.+
T Consensus 43 ~q~v~L~Vs~~gi~l-~D~~t~~~--l~~~~i~~--Is~c~~~~~~~ 84 (129)
T d2cy5a1 43 AQEMLLRVSPSQVTL-LDPVSKEE--LESYPLDA--IVRCDAVMPRG 84 (129)
T ss_dssp CEEEEEEECSSEEEE-ECTTTCCE--EEEEEGGG--EEEEEEECCSS
T ss_pred CceEEEEEeCCeEEE-EeCCCCce--eeccccce--EEEEeecCCCC
Confidence 468999999999999 59987776 44455553 57888766554
No 2
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.19 E-value=37 Score=24.15 Aligned_cols=20 Identities=25% Similarity=0.288 Sum_probs=15.6
Q ss_pred CCCCCcCcCceeeeeeEEeccC
Q 019234 248 NYPGHADFNSYIKCNFIILGSD 269 (344)
Q Consensus 248 N~PG~y~Fn~Y~RC~f~I~~~~ 269 (344)
|+|+.|. ....|.|.|...+
T Consensus 12 ~yP~~Yp--~~~~C~w~I~~p~ 31 (117)
T d1nzia1 12 NYPQAYP--SEVEKSWDIEVPE 31 (117)
T ss_dssp TTTSCCC--SSEEEEEEEECCT
T ss_pred CCCCCCC--CCCcEEEEEEcCC
Confidence 7787665 5578999999865
No 3
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.08 E-value=51 Score=22.77 Aligned_cols=20 Identities=15% Similarity=0.657 Sum_probs=15.7
Q ss_pred CCCCCcCcCceeeeeeEEeccC
Q 019234 248 NYPGHADFNSYIKCNFIILGSD 269 (344)
Q Consensus 248 N~PG~y~Fn~Y~RC~f~I~~~~ 269 (344)
|+|+.|.=| ..|.|.|....
T Consensus 7 ~yP~~Y~~~--~~C~w~I~~p~ 26 (108)
T d2qqma3 7 GFPEKYPNS--LECTYIVFAPK 26 (108)
T ss_dssp TTTSCCCSS--CEEEEEEECGG
T ss_pred CCCCCCCCC--CeEEEEEEeCC
Confidence 889877644 47999999875
No 4
>d2doea1 a.159.2.1 (A:784-853) Transcription elongation regulator 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.01 E-value=51 Score=22.37 Aligned_cols=20 Identities=20% Similarity=0.554 Sum_probs=16.9
Q ss_pred ccCCCCChhHHHhhhCCCCC
Q 019234 283 KITPNTKWEQVKEILGDCGR 302 (344)
Q Consensus 283 ~it~~~~~~~i~~~l~~~~r 302 (344)
.|++.+.|+++...|..+.|
T Consensus 24 ~i~~~s~W~~~~~~~~~DpR 43 (70)
T d2doea1 24 HLDSQSRWSKVKDKVESDPR 43 (70)
T ss_dssp TCCTTCCHHHHHHHHTTSTH
T ss_pred CCCCCCCHHHHHHHhccCHH
Confidence 48999999999999976554
No 5
>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.87 E-value=73 Score=22.59 Aligned_cols=25 Identities=8% Similarity=0.236 Sum_probs=18.3
Q ss_pred EEeeeCCCCCcCcCceeeeeeEEeccC
Q 019234 243 FIMHTNYPGHADFNSYIKCNFIILGSD 269 (344)
Q Consensus 243 ~ILHtN~PG~y~Fn~Y~RC~f~I~~~~ 269 (344)
.|-.=|+|+.|+=| ..|.|.|....
T Consensus 12 ~i~SP~yP~~Yp~~--~~C~W~I~~p~ 36 (121)
T d1szba1 12 RLASPGFPGEYAND--QERRWTLTAPP 36 (121)
T ss_dssp EEECTTTTSCCCSS--CEEEEEEECCT
T ss_pred EEeCCCCCCCCCCC--CeEEEEEEeCC
Confidence 44555899877644 57999999865
No 6
>d1ix2a_ b.1.18.17 (A:) Copper resistance protein C (CopC, PcoC) {Escherichia coli [TaxId: 562]}
Probab=10.18 E-value=40 Score=24.21 Aligned_cols=32 Identities=13% Similarity=0.114 Sum_probs=17.3
Q ss_pred CCccceEEEcCCCCeEEEecCCCCe-EEEEEEeeC
Q 019234 4 PLKLDIIISFPDHGFHLRFDPWSQR-LRLIEIFDI 37 (344)
Q Consensus 4 Pl~~~ivi~lp~~GirL~Fd~~~QR-L~lIEv~d~ 37 (344)
|-..-++ .-| .=|+|.|+.+-+- ..-|+|.+.
T Consensus 8 Pa~gatl-~aP-~~I~L~F~e~v~~~~s~i~v~~~ 40 (102)
T d1ix2a_ 8 PQADSAV-AAP-EKIQLNFSENLTVKFSGAKLTMT 40 (102)
T ss_dssp SCTTCEE-SCC-SCEEEEESSCCCGGGCEEEEEEE
T ss_pred CCCCCEE-cCC-CEEEEEeCCccccccceEEEEeC
Confidence 3344443 445 4499999875432 233555543
No 7
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]}
Probab=9.96 E-value=2.5e+02 Score=21.72 Aligned_cols=31 Identities=16% Similarity=0.067 Sum_probs=16.9
Q ss_pred eEEEecC-CCCeEEEEEEeeCCCceEEEccee
Q 019234 18 FHLRFDP-WSQRLRLIEIFDIKRLQMRYATSL 48 (344)
Q Consensus 18 irL~Fd~-~~QRL~lIEv~d~~~~~L~Y~~~~ 48 (344)
-.+.+.+ ..+|||+|=.=...-+.++..+..
T Consensus 54 ~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~H~ 85 (172)
T d1hfua2 54 SIVNVEQGKKYRMRLISLSCDPNWQFSIDGHE 85 (172)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCC
T ss_pred eEEEECCCCEEEEEEeeecCCceEEEEeCCCe
Confidence 3455554 667777775444444555554443
No 8
>d2k54a1 d.17.4.29 (A:1-123) Uncharacterized protein Atu0742 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=9.59 E-value=92 Score=22.16 Aligned_cols=16 Identities=31% Similarity=0.420 Sum_probs=12.8
Q ss_pred eEEEEecCCceEEEEEe
Q 019234 326 IAFEVMKNGYISTVTMF 342 (344)
Q Consensus 326 iifEVm~N~~IasvTlf 342 (344)
.+||| +||-|+.+|.+
T Consensus 97 ~vf~~-~dGkI~r~~f~ 112 (123)
T d2k54a1 97 CIYEV-ENGRIAKAWFK 112 (123)
T ss_dssp EEEEE-ETTEEEEEEEE
T ss_pred EEEEE-ECCEEEEEEEc
Confidence 46888 79999999854
No 9
>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=8.99 E-value=1.2e+02 Score=21.24 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=18.6
Q ss_pred EEeeeCCCCCcCcCceeeeeeEEeccC
Q 019234 243 FIMHTNYPGHADFNSYIKCNFIILGSD 269 (344)
Q Consensus 243 ~ILHtN~PG~y~Fn~Y~RC~f~I~~~~ 269 (344)
.|-.-|+|+.|.=| ..|.|.|....
T Consensus 12 ~i~SP~yP~~Y~~~--~~C~w~I~~p~ 36 (114)
T d1nt0a2 12 FLSSPEYPQPYPKL--SSCAYNIRLEE 36 (114)
T ss_dssp EEECTTTTSCCCSS--CEEEEEEECCS
T ss_pred EEECCCCCCCCCCC--CeEEEEEEeCC
Confidence 44556899877644 56999999875
No 10
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]}
Probab=8.44 E-value=1.4e+02 Score=22.08 Aligned_cols=30 Identities=20% Similarity=0.186 Sum_probs=23.4
Q ss_pred eeeecccceeEEEeCCcceEEEEEeeeCCC
Q 019234 221 FYNYYTRGLDILFDGQTHKIKKFIMHTNYP 250 (344)
Q Consensus 221 FyNYF~lGlDiL~d~~th~v~K~ILHtN~P 250 (344)
+|-+.=-||=+++|..+.+|.++.=|..+|
T Consensus 71 ~YA~PIeGl~~vvDl~~~~Vi~i~D~~~vp 100 (115)
T d1d6za3 71 YWAHPIENLVAVVDLEQKKIVKIEEGPVVP 100 (115)
T ss_dssp GGGSEEEEEEEEEETTTTEEEEEEECCCCC
T ss_pred ccccccCceEEEEECCCCEEEEEECCCCcc
Confidence 344444567799999999999998888775
Done!