Query 019238
Match_columns 344
No_of_seqs 304 out of 2505
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 13:00:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019238.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019238hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uk7_A Class I glutamine amido 100.0 8.7E-53 3E-57 398.7 26.8 295 1-329 26-393 (396)
2 4e08_A DJ-1 beta; flavodoxin-l 100.0 2.1E-39 7.1E-44 276.5 21.2 185 158-343 3-189 (190)
3 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 2.5E-38 8.5E-43 273.4 20.4 184 159-342 8-193 (208)
4 2rk3_A Protein DJ-1; parkinson 100.0 3.2E-38 1.1E-42 270.6 20.5 184 159-343 2-189 (197)
5 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 1.2E-37 4.2E-42 268.5 20.3 184 160-343 2-189 (205)
6 4gdh_A DJ-1, uncharacterized p 100.0 8.1E-38 2.8E-42 267.0 18.8 182 159-342 3-194 (194)
7 3er6_A Putative transcriptiona 100.0 4.7E-38 1.6E-42 271.7 17.1 181 159-343 7-200 (209)
8 3noq_A THIJ/PFPI family protei 100.0 1.3E-37 4.5E-42 272.6 19.4 180 159-343 4-186 (231)
9 3mgk_A Intracellular protease/ 100.0 7.5E-38 2.6E-42 270.7 17.4 180 159-343 3-189 (211)
10 3gra_A Transcriptional regulat 100.0 4.1E-38 1.4E-42 270.6 14.7 179 159-343 4-192 (202)
11 3ewn_A THIJ/PFPI family protei 100.0 2.7E-37 9.2E-42 273.5 19.9 182 159-343 22-206 (253)
12 4hcj_A THIJ/PFPI domain protei 100.0 4.1E-37 1.4E-41 257.8 16.9 166 160-328 8-175 (177)
13 3efe_A THIJ/PFPI family protei 100.0 7.6E-36 2.6E-40 258.5 15.7 178 160-343 5-196 (212)
14 3bhn_A THIJ/PFPI domain protei 100.0 2.2E-35 7.4E-40 258.6 16.9 178 159-343 19-201 (236)
15 3l18_A Intracellular protease 100.0 2.7E-35 9.2E-40 246.1 16.4 164 160-326 2-167 (168)
16 2vrn_A Protease I, DR1199; cys 100.0 3.5E-35 1.2E-39 250.3 16.5 173 159-333 8-188 (190)
17 3f5d_A Protein YDEA; unknow pr 100.0 1.8E-34 6.3E-39 248.1 14.2 175 160-343 3-183 (206)
18 1oi4_A Hypothetical protein YH 100.0 8.1E-34 2.8E-38 242.3 18.0 171 154-327 17-192 (193)
19 2fex_A Conserved hypothetical 100.0 4.9E-34 1.7E-38 242.8 15.7 176 160-342 1-183 (188)
20 3fse_A Two-domain protein cont 100.0 1.6E-34 5.6E-39 266.5 13.1 178 159-339 9-190 (365)
21 3cne_A Putative protease I; st 100.0 1.1E-32 3.7E-37 231.8 14.4 161 159-326 1-174 (175)
22 1u9c_A APC35852; structural ge 100.0 3.8E-32 1.3E-36 237.5 15.8 170 159-330 4-224 (224)
23 3kkl_A Probable chaperone prot 100.0 2.7E-30 9.4E-35 227.3 16.5 171 160-331 3-240 (244)
24 1rw7_A YDR533CP; alpha-beta sa 100.0 1.9E-30 6.5E-35 229.2 14.6 167 160-328 3-237 (243)
25 1n57_A Chaperone HSP31, protei 100.0 4.4E-30 1.5E-34 232.1 15.0 171 160-332 48-283 (291)
26 3n7t_A Macrophage binding prot 100.0 8.4E-30 2.9E-34 224.3 15.8 169 160-329 9-244 (247)
27 3uk7_A Class I glutamine amido 100.0 2.1E-29 7.1E-34 238.3 17.6 170 159-330 11-201 (396)
28 1vhq_A Enhancing lycopene bios 100.0 2.7E-29 9.1E-34 220.4 9.5 172 159-338 5-220 (232)
29 3l3b_A ES1 family protein; ssg 99.9 3.5E-28 1.2E-32 213.3 9.4 166 159-329 22-228 (242)
30 4e08_A DJ-1 beta; flavodoxin-l 99.9 1.6E-27 5.4E-32 202.9 12.5 138 1-139 19-189 (190)
31 3er6_A Putative transcriptiona 99.9 4.2E-27 1.4E-31 203.0 11.1 142 1-144 22-205 (209)
32 3noq_A THIJ/PFPI family protei 99.9 1.3E-26 4.3E-31 202.8 13.0 137 1-140 19-187 (231)
33 3ot1_A 4-methyl-5(B-hydroxyeth 99.9 5.2E-27 1.8E-31 202.4 9.9 142 2-144 24-199 (208)
34 3ewn_A THIJ/PFPI family protei 99.9 1.8E-26 6E-31 204.1 12.8 139 1-141 37-208 (253)
35 2rk3_A Protein DJ-1; parkinson 99.9 1.7E-26 5.9E-31 197.6 12.1 137 2-139 18-189 (197)
36 3mgk_A Intracellular protease/ 99.9 9.6E-27 3.3E-31 201.0 10.3 138 1-141 18-191 (211)
37 4hcj_A THIJ/PFPI domain protei 99.9 5.5E-26 1.9E-30 190.2 12.8 121 1-124 22-175 (177)
38 4gdh_A DJ-1, uncharacterized p 99.9 5.6E-26 1.9E-30 193.6 12.2 136 1-138 18-194 (194)
39 3gra_A Transcriptional regulat 99.9 2.3E-26 8E-31 197.3 7.8 138 1-144 19-197 (202)
40 2ab0_A YAJL; DJ-1/THIJ superfa 99.9 1.2E-25 4.3E-30 193.3 11.7 139 2-141 17-191 (205)
41 3efe_A THIJ/PFPI family protei 99.9 2.7E-24 9.2E-29 185.9 11.4 137 1-143 19-200 (212)
42 3bhn_A THIJ/PFPI domain protei 99.9 2.9E-24 9.8E-29 188.0 10.6 136 1-141 34-203 (236)
43 3f5d_A Protein YDEA; unknow pr 99.9 1E-23 3.5E-28 181.1 10.8 133 1-141 17-185 (206)
44 2vrn_A Protease I, DR1199; cys 99.9 2.5E-23 8.5E-28 176.9 9.5 126 2-129 24-188 (190)
45 3fse_A Two-domain protein cont 99.9 2.4E-23 8.1E-28 192.1 8.9 133 1-135 24-190 (365)
46 3l18_A Intracellular protease 99.9 6.1E-23 2.1E-27 171.0 10.3 118 2-122 17-167 (168)
47 2fex_A Conserved hypothetical 99.9 2.6E-22 9E-27 170.2 12.6 131 1-138 15-183 (188)
48 1sy7_A Catalase 1; heme oxidat 99.9 6.1E-22 2.1E-26 196.1 16.3 158 160-334 534-704 (715)
49 1oi4_A Hypothetical protein YH 99.9 1.1E-21 3.9E-26 167.0 11.6 119 2-123 38-192 (193)
50 3cne_A Putative protease I; st 99.9 2.3E-21 8E-26 162.5 10.9 117 5-122 20-174 (175)
51 3kkl_A Probable chaperone prot 99.8 6.1E-21 2.1E-25 167.7 6.5 123 2-125 30-238 (244)
52 1u9c_A APC35852; structural ge 99.8 1.2E-20 4E-25 164.5 6.8 122 2-125 30-223 (224)
53 3ttv_A Catalase HPII; heme ori 99.8 7.2E-19 2.5E-23 172.5 15.1 113 159-275 599-711 (753)
54 3n7t_A Macrophage binding prot 99.8 6.2E-20 2.1E-24 161.3 5.2 122 2-124 36-243 (247)
55 1rw7_A YDR533CP; alpha-beta sa 99.8 5.1E-20 1.8E-24 162.3 3.9 121 2-124 30-237 (243)
56 1n57_A Chaperone HSP31, protei 99.8 1.2E-19 4E-24 163.8 3.3 125 1-127 76-282 (291)
57 1vhq_A Enhancing lycopene bios 99.7 3.2E-19 1.1E-23 156.1 3.2 136 1-145 25-228 (232)
58 3l3b_A ES1 family protein; ssg 99.7 8.4E-18 2.9E-22 147.3 3.0 121 1-126 42-229 (242)
59 2iuf_A Catalase; oxidoreductas 99.7 5.1E-16 1.8E-20 152.0 13.5 165 124-326 486-675 (688)
60 3ej6_A Catalase-3; heme, hydro 99.6 3.8E-15 1.3E-19 145.4 13.9 141 124-275 494-649 (688)
61 1sy7_A Catalase 1; heme oxidat 99.6 7.7E-15 2.6E-19 145.5 10.1 121 2-124 549-698 (715)
62 3ttv_A Catalase HPII; heme ori 99.3 3.5E-12 1.2E-16 125.4 10.1 115 1-122 614-736 (753)
63 2iuf_A Catalase; oxidoreductas 99.1 3.4E-10 1.2E-14 111.1 9.8 107 2-123 546-676 (688)
64 3d54_D Phosphoribosylformylgly 99.1 1.9E-10 6.5E-15 98.8 7.2 95 159-278 1-101 (213)
65 3ej6_A Catalase-3; heme, hydro 98.8 1.8E-08 6.2E-13 98.7 10.9 90 2-104 553-657 (688)
66 1q7r_A Predicted amidotransfer 98.3 1.6E-06 5.6E-11 74.4 7.5 86 160-271 23-109 (219)
67 2nv0_A Glutamine amidotransfer 98.2 2.6E-06 8.9E-11 71.8 8.1 86 160-271 1-87 (196)
68 2iss_D Glutamine amidotransfer 98.1 4.7E-06 1.6E-10 71.0 7.7 88 159-272 19-107 (208)
69 2ywd_A Glutamine amidotransfer 98.1 6.9E-06 2.4E-10 68.8 7.2 87 160-272 2-90 (191)
70 1ka9_H Imidazole glycerol phos 98.1 1.2E-05 4E-10 68.0 8.7 88 160-272 2-91 (200)
71 3l7n_A Putative uncharacterize 98.0 3.4E-05 1.2E-09 66.9 10.0 94 161-272 1-100 (236)
72 3m3p_A Glutamine amido transfe 98.0 2.6E-05 9E-10 68.1 8.9 95 160-272 3-98 (250)
73 1wl8_A GMP synthase [glutamine 97.8 7.5E-05 2.6E-09 62.3 8.4 85 163-271 3-87 (189)
74 3ugj_A Phosphoribosylformylgly 97.8 0.0001 3.5E-09 77.9 11.1 101 159-278 1046-1159(1303)
75 3d54_D Phosphoribosylformylgly 97.8 1.7E-05 5.7E-10 67.6 4.1 76 5-97 18-101 (213)
76 2abw_A PDX2 protein, glutamina 97.7 6.2E-05 2.1E-09 64.8 7.5 87 160-272 3-96 (227)
77 1qdl_B Protein (anthranilate s 97.7 8.3E-05 2.8E-09 62.5 7.5 90 163-272 4-93 (195)
78 4gud_A Imidazole glycerol phos 97.6 6E-05 2E-09 64.1 5.5 88 159-272 1-88 (211)
79 1gpw_B Amidotransferase HISH; 97.5 0.00037 1.3E-08 58.7 8.6 86 161-272 1-93 (201)
80 2ywj_A Glutamine amidotransfer 97.5 0.00028 9.5E-09 58.6 7.5 83 161-272 1-84 (186)
81 1o1y_A Conserved hypothetical 97.4 0.00024 8.2E-09 61.6 6.1 94 161-272 13-109 (239)
82 1fy2_A Aspartyl dipeptidase; s 97.2 0.00033 1.1E-08 60.3 5.5 96 159-272 30-129 (229)
83 3l4e_A Uncharacterized peptida 97.2 0.00039 1.3E-08 58.8 5.6 98 160-271 27-128 (206)
84 1a9x_B Carbamoyl phosphate syn 97.2 0.0013 4.5E-08 60.7 9.2 87 161-272 191-277 (379)
85 2a9v_A GMP synthase; structura 97.1 0.00088 3E-08 56.9 7.1 89 159-272 12-101 (212)
86 2vdj_A Homoserine O-succinyltr 96.8 0.0028 9.5E-08 56.6 7.3 113 159-271 34-151 (301)
87 2vpi_A GMP synthase; guanine m 96.7 0.0013 4.5E-08 56.1 4.4 88 160-272 24-112 (218)
88 2h2w_A Homoserine O-succinyltr 96.7 0.003 1E-07 56.6 6.8 115 158-272 45-164 (312)
89 3fij_A LIN1909 protein; 11172J 96.5 0.0067 2.3E-07 52.9 7.9 98 159-272 3-124 (254)
90 1jvn_A Glutamine, bifunctional 96.4 0.0033 1.1E-07 61.2 5.7 90 160-272 4-95 (555)
91 3uow_A GMP synthetase; structu 96.3 0.011 3.8E-07 57.5 8.6 92 160-272 7-99 (556)
92 2w7t_A CTP synthetase, putativ 96.1 0.01 3.4E-07 52.4 6.8 95 161-270 9-110 (273)
93 1l9x_A Gamma-glutamyl hydrolas 96.0 0.0083 2.9E-07 54.1 5.8 96 160-270 30-138 (315)
94 2v4u_A CTP synthase 2; pyrimid 95.7 0.0093 3.2E-07 53.1 4.6 101 161-271 26-134 (289)
95 3r75_A Anthranilate/para-amino 95.3 0.056 1.9E-06 53.4 8.9 88 160-271 446-536 (645)
96 3tqi_A GMP synthase [glutamine 95.0 0.023 8E-07 54.9 5.3 87 161-271 11-97 (527)
97 2nv0_A Glutamine amidotransfer 95.0 0.018 6.1E-07 47.9 3.9 69 6-91 16-88 (196)
98 1q7r_A Predicted amidotransfer 94.5 0.016 5.6E-07 49.2 2.5 68 7-91 39-110 (219)
99 3en0_A Cyanophycinase; serine 94.3 0.074 2.5E-06 47.1 6.4 99 161-270 57-159 (291)
100 1i1q_B Anthranilate synthase c 93.9 0.19 6.7E-06 41.4 7.9 90 162-272 2-92 (192)
101 1gpm_A GMP synthetase, XMP ami 93.6 0.085 2.9E-06 50.9 5.9 87 161-271 8-94 (525)
102 2iss_D Glutamine amidotransfer 93.6 0.032 1.1E-06 46.9 2.6 68 7-91 36-107 (208)
103 3ugj_A Phosphoribosylformylgly 93.2 0.17 5.9E-06 53.7 7.8 40 57-97 1118-1159(1303)
104 3nva_A CTP synthase; rossman f 93.2 0.093 3.2E-06 50.0 5.2 150 99-270 234-393 (535)
105 2ywd_A Glutamine amidotransfer 92.7 0.053 1.8E-06 44.7 2.6 69 6-91 17-90 (191)
106 1ka9_H Imidazole glycerol phos 92.5 0.082 2.8E-06 44.0 3.5 67 7-91 19-91 (200)
107 3l7n_A Putative uncharacterize 92.2 0.54 1.9E-05 40.1 8.4 74 7-91 18-100 (236)
108 2vxo_A GMP synthase [glutamine 92.0 0.092 3.1E-06 52.4 3.6 89 160-272 29-117 (697)
109 1s1m_A CTP synthase; CTP synth 91.6 0.19 6.6E-06 48.4 5.3 45 221-270 342-386 (545)
110 1wl8_A GMP synthase [glutamine 91.6 0.24 8.3E-06 40.6 5.3 68 6-91 16-88 (189)
111 3m3p_A Glutamine amido transfe 91.3 0.32 1.1E-05 42.0 6.0 74 7-91 21-98 (250)
112 1vco_A CTP synthetase; tetrame 91.1 0.19 6.5E-06 48.5 4.7 46 221-271 354-399 (550)
113 1qdl_B Protein (anthranilate s 90.0 0.27 9.2E-06 40.6 4.1 69 6-91 17-93 (195)
114 2ywb_A GMP synthase [glutamine 89.4 0.5 1.7E-05 45.2 6.0 75 177-272 13-87 (503)
115 2abw_A PDX2 protein, glutamina 88.1 0.27 9.2E-06 41.7 2.9 30 61-91 66-96 (227)
116 1o1y_A Conserved hypothetical 83.8 1.8 6.1E-05 36.9 5.9 29 62-91 81-109 (239)
117 3rht_A (gatase1)-like protein; 83.7 4.6 0.00016 34.8 8.5 85 159-263 3-87 (259)
118 3l4e_A Uncharacterized peptida 82.5 0.55 1.9E-05 39.2 2.0 31 59-90 98-128 (206)
119 3hly_A Flavodoxin-like domain; 80.0 3.8 0.00013 32.3 6.3 90 161-265 1-92 (161)
120 2ywj_A Glutamine amidotransfer 79.2 1.5 5E-05 35.6 3.6 25 63-91 60-84 (186)
121 1z0s_A Probable inorganic poly 76.9 4.8 0.00016 35.1 6.3 87 146-265 13-101 (278)
122 3fij_A LIN1909 protein; 11172J 76.7 4.5 0.00015 34.7 6.1 30 61-91 95-124 (254)
123 3f6r_A Flavodoxin; FMN binding 74.9 3.1 0.0001 32.1 4.2 86 160-264 1-94 (148)
124 2ark_A Flavodoxin; FMN, struct 74.4 7 0.00024 31.5 6.5 84 160-263 4-96 (188)
125 2a5l_A Trp repressor binding p 73.1 9.4 0.00032 30.8 7.0 100 160-265 5-118 (200)
126 2zuv_A Lacto-N-biose phosphory 73.1 15 0.00051 36.1 9.0 73 175-264 469-545 (759)
127 3fni_A Putative diflavin flavo 72.2 15 0.00052 28.7 7.8 92 160-265 4-97 (159)
128 1u0t_A Inorganic polyphosphate 72.0 9.8 0.00033 33.6 7.3 95 160-265 4-109 (307)
129 2a9v_A GMP synthase; structura 70.6 5 0.00017 33.3 4.7 21 70-91 81-101 (212)
130 4gud_A Imidazole glycerol phos 70.5 0.8 2.7E-05 38.1 -0.3 28 65-93 63-90 (211)
131 1jg7_A BGT, DNA beta-glucosylt 69.9 9.7 0.00033 31.8 6.1 48 172-230 19-66 (351)
132 2b99_A Riboflavin synthase; lu 69.4 6.7 0.00023 30.9 4.8 93 160-261 2-98 (156)
133 2r47_A Uncharacterized protein 65.5 2.4 8.3E-05 33.3 1.6 106 159-274 25-134 (157)
134 1gpw_B Amidotransferase HISH; 65.1 2.7 9.3E-05 34.5 2.0 30 62-92 65-94 (201)
135 2hna_A Protein MIOC, flavodoxi 64.9 29 0.00098 26.4 7.9 86 161-265 2-92 (147)
136 1f4p_A Flavodoxin; electron tr 63.9 9.8 0.00034 29.0 5.0 88 161-265 1-94 (147)
137 2q9u_A A-type flavoprotein; fl 63.2 20 0.00067 32.7 7.7 90 160-265 256-351 (414)
138 3nq4_A 6,7-dimethyl-8-ribityll 62.1 24 0.0008 27.8 6.7 92 159-259 11-113 (156)
139 1ydg_A Trp repressor binding p 61.8 19 0.00066 29.3 6.7 100 159-264 5-124 (211)
140 3okf_A 3-dehydroquinate syntha 61.4 18 0.00063 33.1 7.0 140 159-310 61-201 (390)
141 2v4u_A CTP synthase 2; pyrimid 61.3 7.1 0.00024 34.2 4.0 29 61-90 106-134 (289)
142 2i0f_A 6,7-dimethyl-8-ribityll 60.3 28 0.00094 27.4 6.9 93 161-259 13-114 (157)
143 1fy2_A Aspartyl dipeptidase; s 59.6 4.1 0.00014 34.4 2.1 33 60-93 99-131 (229)
144 3qbe_A 3-dehydroquinate syntha 58.2 22 0.00077 32.2 6.9 137 161-310 44-181 (368)
145 3b6i_A Flavoprotein WRBA; flav 57.3 32 0.0011 27.4 7.2 100 160-265 1-115 (198)
146 3kjx_A Transcriptional regulat 56.9 52 0.0018 28.8 9.2 61 128-197 45-108 (344)
147 1hqk_A 6,7-dimethyl-8-ribityll 55.8 37 0.0013 26.6 6.9 93 159-260 11-113 (154)
148 1a9x_B Carbamoyl phosphate syn 54.8 9.7 0.00033 34.8 3.9 32 59-91 246-277 (379)
149 2bon_A Lipid kinase; DAG kinas 54.7 19 0.00067 31.9 5.9 87 160-265 29-120 (332)
150 3s40_A Diacylglycerol kinase; 54.6 28 0.00096 30.4 6.8 87 159-265 7-99 (304)
151 3r75_A Anthranilate/para-amino 53.2 15 0.00053 36.0 5.2 29 62-91 509-537 (645)
152 3m9w_A D-xylose-binding peripl 52.9 26 0.00089 30.2 6.4 87 160-263 2-91 (313)
153 1rvv_A Riboflavin synthase; tr 52.9 37 0.0013 26.6 6.4 93 159-260 11-113 (154)
154 2c92_A 6,7-dimethyl-8-ribityll 52.7 35 0.0012 26.9 6.3 91 159-260 16-114 (160)
155 2qv7_A Diacylglycerol kinase D 52.4 23 0.00078 31.5 6.0 38 160-197 24-65 (337)
156 1t0b_A THUA-like protein; treh 52.2 67 0.0023 27.2 8.6 70 179-264 37-106 (252)
157 3l6u_A ABC-type sugar transpor 51.9 23 0.0008 30.0 5.8 89 158-263 6-97 (293)
158 1jvn_A Glutamine, bifunctional 51.9 5.3 0.00018 38.6 1.7 29 62-91 67-95 (555)
159 2obx_A DMRL synthase 1, 6,7-di 51.6 27 0.00091 27.5 5.4 93 159-260 10-112 (157)
160 3uug_A Multiple sugar-binding 50.8 29 0.001 30.0 6.4 89 159-264 2-93 (330)
161 2fz5_A Flavodoxin; alpha/beta 50.0 73 0.0025 23.3 8.1 68 177-264 18-89 (137)
162 2gk3_A Putative cytoplasmic pr 49.9 30 0.001 29.4 6.1 75 175-262 41-125 (256)
163 2ohh_A Type A flavoprotein FPR 49.7 23 0.0008 32.0 5.7 91 159-265 255-353 (404)
164 1c2y_A Protein (lumazine synth 49.0 32 0.0011 27.0 5.5 92 159-259 12-112 (156)
165 2i2c_A Probable inorganic poly 49.0 36 0.0012 29.3 6.5 36 221-265 34-71 (272)
166 3l49_A ABC sugar (ribose) tran 48.9 29 0.001 29.3 6.0 88 159-263 4-94 (291)
167 2w7t_A CTP synthetase, putativ 48.6 13 0.00043 32.3 3.5 30 60-90 82-111 (273)
168 2an1_A Putative kinase; struct 48.3 18 0.00062 31.4 4.5 91 160-265 5-97 (292)
169 2fn9_A Ribose ABC transporter, 48.2 30 0.001 29.3 5.9 87 160-263 2-91 (290)
170 2vzf_A NADH-dependent FMN redu 48.1 7.6 0.00026 31.6 1.9 100 160-265 2-112 (197)
171 1kz1_A 6,7-dimethyl-8-ribityll 48.0 55 0.0019 25.7 6.7 92 159-259 16-118 (159)
172 3g1w_A Sugar ABC transporter; 47.2 30 0.001 29.5 5.8 89 159-263 3-94 (305)
173 5nul_A Flavodoxin; electron tr 46.9 62 0.0021 24.0 7.0 78 170-265 10-89 (138)
174 3huu_A Transcription regulator 46.8 22 0.00076 30.5 4.9 39 158-196 20-66 (305)
175 1ykg_A SIR-FP, sulfite reducta 46.6 19 0.00067 28.2 4.1 86 160-264 9-102 (167)
176 2zki_A 199AA long hypothetical 46.0 43 0.0015 26.7 6.3 99 160-264 4-116 (199)
177 1di0_A Lumazine synthase; tran 45.4 37 0.0013 26.7 5.3 92 160-260 10-111 (158)
178 3kbq_A Protein TA0487; structu 43.1 57 0.0019 26.0 6.3 86 159-253 2-107 (172)
179 3dbi_A Sugar-binding transcrip 43.0 64 0.0022 28.0 7.4 40 158-197 59-103 (338)
180 3jy6_A Transcriptional regulat 42.1 64 0.0022 27.0 7.0 86 158-263 5-93 (276)
181 1ejb_A Lumazine synthase; anal 41.6 40 0.0014 26.8 5.1 95 159-259 15-121 (168)
182 3tb6_A Arabinose metabolism tr 40.8 71 0.0024 26.8 7.2 90 160-263 15-107 (298)
183 3h5o_A Transcriptional regulat 40.2 75 0.0026 27.6 7.4 39 159-197 61-102 (339)
184 1sqs_A Conserved hypothetical 39.2 29 0.00099 29.0 4.2 99 160-264 1-125 (242)
185 3e3m_A Transcriptional regulat 37.8 60 0.002 28.5 6.4 39 159-197 69-110 (355)
186 2dri_A D-ribose-binding protei 37.1 68 0.0023 26.7 6.4 86 161-263 2-90 (271)
187 3o74_A Fructose transport syst 37.0 60 0.0021 26.9 6.0 38 160-197 2-42 (272)
188 3tty_A Beta-GAL, beta-galactos 36.8 89 0.003 30.7 7.9 63 175-264 426-489 (675)
189 3ff4_A Uncharacterized protein 36.5 1.1E+02 0.0039 22.6 6.7 64 159-230 3-66 (122)
190 3gbv_A Putative LACI-family tr 35.6 48 0.0016 28.1 5.2 91 158-263 6-102 (304)
191 4e5v_A Putative THUA-like prot 35.1 2.2E+02 0.0074 24.5 11.1 90 160-265 4-96 (281)
192 1czn_A Flavodoxin; FMN binding 34.7 29 0.001 27.0 3.4 42 221-264 45-89 (169)
193 3hn2_A 2-dehydropantoate 2-red 34.7 57 0.0019 28.4 5.6 93 160-265 2-106 (312)
194 1l9x_A Gamma-glutamyl hydrolas 33.9 35 0.0012 30.1 4.0 30 61-91 109-140 (315)
195 2o20_A Catabolite control prot 33.3 81 0.0028 27.3 6.4 40 158-197 61-103 (332)
196 2q62_A ARSH; alpha/beta, flavo 32.6 49 0.0017 28.0 4.6 112 145-264 18-145 (247)
197 3ty2_A 5'-nucleotidase SURE; s 32.4 58 0.002 27.9 4.9 44 154-198 5-48 (261)
198 2ioy_A Periplasmic sugar-bindi 32.3 68 0.0023 27.0 5.6 86 161-263 2-90 (283)
199 3i83_A 2-dehydropantoate 2-red 32.1 62 0.0021 28.3 5.4 95 160-265 2-108 (320)
200 1i1q_B Anthranilate synthase c 31.9 27 0.00093 28.1 2.8 27 64-92 67-93 (192)
201 2fvy_A D-galactose-binding per 31.5 81 0.0028 26.7 6.0 87 160-263 2-92 (309)
202 3bbl_A Regulatory protein of L 31.2 1.2E+02 0.0042 25.3 7.1 37 159-195 3-46 (287)
203 1rtt_A Conserved hypothetical 31.2 26 0.0009 28.0 2.6 99 160-264 6-117 (193)
204 2hsg_A Glucose-resistance amyl 31.1 59 0.002 28.2 5.1 38 159-196 59-99 (332)
205 1e5d_A Rubredoxin\:oxygen oxid 31.0 76 0.0026 28.5 6.0 89 160-264 252-345 (402)
206 3uow_A GMP synthetase; structu 30.3 44 0.0015 32.1 4.3 25 66-91 75-99 (556)
207 3qk7_A Transcriptional regulat 30.0 1.5E+02 0.0052 24.9 7.5 39 158-196 4-49 (294)
208 1obo_A Flavodoxin; electron tr 29.3 1.1E+02 0.0039 23.4 6.1 43 221-265 45-90 (169)
209 1t5b_A Acyl carrier protein ph 29.3 70 0.0024 25.3 4.9 87 160-252 1-113 (201)
210 3k4h_A Putative transcriptiona 28.9 94 0.0032 26.0 5.9 87 158-263 6-100 (292)
211 3kke_A LACI family transcripti 28.5 1.4E+02 0.0048 25.2 7.1 40 158-197 13-55 (303)
212 3u1h_A 3-isopropylmalate dehyd 28.4 29 0.00098 31.7 2.5 69 157-228 20-92 (390)
213 3bil_A Probable LACI-family tr 27.7 80 0.0027 27.6 5.4 38 159-196 65-105 (348)
214 3gv0_A Transcriptional regulat 27.6 88 0.003 26.3 5.5 40 158-197 6-50 (288)
215 3rot_A ABC sugar transporter, 27.4 70 0.0024 27.1 4.8 89 160-264 3-95 (297)
216 3brq_A HTH-type transcriptiona 27.4 1.3E+02 0.0046 25.0 6.7 38 159-196 18-60 (296)
217 3d3j_A Enhancer of mRNA-decapp 27.1 3.1E+02 0.011 23.8 11.7 101 161-264 133-243 (306)
218 2x7x_A Sensor protein; transfe 27.1 97 0.0033 26.7 5.8 87 159-263 5-95 (325)
219 4amg_A Snogd; transferase, pol 26.3 74 0.0025 28.2 5.0 39 159-197 21-60 (400)
220 2gru_A 2-deoxy-scyllo-inosose 26.1 1E+02 0.0035 27.6 5.8 135 160-307 34-169 (368)
221 3h75_A Periplasmic sugar-bindi 25.7 98 0.0034 26.9 5.6 87 160-264 3-95 (350)
222 1iow_A DD-ligase, DDLB, D-ALA\ 25.7 1.9E+02 0.0063 24.5 7.3 38 160-197 2-44 (306)
223 3nbm_A PTS system, lactose-spe 25.4 1.9E+02 0.0065 20.8 6.3 81 159-264 5-87 (108)
224 1bvy_F Protein (cytochrome P45 25.4 1.4E+02 0.0047 24.0 5.9 87 160-264 21-112 (191)
225 1wui_S Periplasmic [NIFE] hydr 25.4 49 0.0017 28.5 3.3 44 220-264 67-114 (267)
226 3egc_A Putative ribose operon 25.3 65 0.0022 27.1 4.2 40 158-197 6-48 (291)
227 3i9v_6 NADH-quinone oxidoreduc 25.1 47 0.0016 26.7 2.9 40 220-264 72-111 (181)
228 1qpz_A PURA, protein (purine n 24.8 81 0.0028 27.4 4.8 39 158-196 56-97 (340)
229 3hcw_A Maltose operon transcri 24.5 1E+02 0.0034 26.1 5.3 86 159-263 6-99 (295)
230 3k9c_A Transcriptional regulat 24.5 2E+02 0.0068 24.0 7.2 62 159-231 11-75 (289)
231 1ffv_A CUTS, iron-sulfur prote 24.4 13 0.00045 29.5 -0.5 64 60-124 83-157 (163)
232 2pln_A HP1043, response regula 24.4 1.9E+02 0.0066 20.6 6.4 77 159-262 17-93 (137)
233 2rjo_A Twin-arginine transloca 24.2 92 0.0031 26.9 5.1 88 159-263 4-96 (332)
234 2fep_A Catabolite control prot 23.8 1.6E+02 0.0056 24.6 6.6 38 159-196 15-55 (289)
235 3ksm_A ABC-type sugar transpor 23.5 89 0.003 25.8 4.7 87 162-263 2-92 (276)
236 1ag9_A Flavodoxin; electron tr 23.5 61 0.0021 25.4 3.4 43 221-265 44-89 (175)
237 1tjy_A Sugar transport protein 23.5 89 0.0031 26.8 4.8 88 160-263 3-93 (316)
238 3c3k_A Alanine racemase; struc 23.4 2.4E+02 0.0081 23.4 7.5 39 158-196 6-47 (285)
239 1ycg_A Nitric oxide reductase; 22.4 1.4E+02 0.0049 26.5 6.1 92 160-264 251-344 (398)
240 3en0_A Cyanophycinase; serine 22.4 36 0.0012 29.7 1.9 33 58-91 128-161 (291)
241 1rm6_C 4-hydroxybenzoyl-COA re 22.4 11 0.00038 29.9 -1.3 57 66-123 88-155 (161)
242 1yqw_A Periplasmic [NIFE] hydr 22.4 68 0.0023 27.5 3.6 43 221-264 68-114 (264)
243 2phj_A 5'-nucleotidase SURE; S 22.3 87 0.003 26.6 4.2 38 160-198 1-38 (251)
244 3o1i_D Periplasmic protein TOR 22.2 43 0.0015 28.4 2.4 86 159-262 4-94 (304)
245 3hrd_D Nicotinate dehydrogenas 22.0 14 0.00046 29.3 -0.9 62 60-122 83-155 (160)
246 3clk_A Transcription regulator 21.8 2.2E+02 0.0075 23.7 7.0 35 159-193 7-44 (290)
247 2vdj_A Homoserine O-succinyltr 21.5 53 0.0018 28.8 2.8 31 61-92 122-153 (301)
248 2h2w_A Homoserine O-succinyltr 21.4 53 0.0018 29.0 2.8 31 61-92 134-165 (312)
249 3brs_A Periplasmic binding pro 21.2 57 0.002 27.4 3.0 37 159-195 4-45 (289)
250 8abp_A L-arabinose-binding pro 21.1 1.2E+02 0.004 25.6 5.0 86 160-263 2-90 (306)
251 1gud_A ALBP, D-allose-binding 20.9 1.5E+02 0.0052 24.8 5.7 86 161-263 2-92 (288)
252 2rgy_A Transcriptional regulat 20.8 1.9E+02 0.0064 24.2 6.3 38 159-196 7-47 (290)
253 3cs3_A Sugar-binding transcrip 20.8 3.5E+02 0.012 22.1 10.1 40 158-197 6-48 (277)
254 3rss_A Putative uncharacterize 20.7 2.9E+02 0.0099 26.0 7.9 107 160-275 52-171 (502)
255 2xgg_A Microneme protein 2; A/ 20.6 1.3E+02 0.0043 23.4 4.8 38 160-197 122-161 (178)
256 3d02_A Putative LACI-type tran 20.5 1.3E+02 0.0044 25.3 5.2 89 160-264 4-95 (303)
257 3ezx_A MMCP 1, monomethylamine 20.4 1E+02 0.0034 25.4 4.2 57 160-228 92-149 (215)
258 4fe7_A Xylose operon regulator 20.3 1.9E+02 0.0064 26.0 6.5 85 154-263 19-105 (412)
No 1
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=100.00 E-value=8.7e-53 Score=398.70 Aligned_cols=295 Identities=23% Similarity=0.307 Sum_probs=261.2
Q ss_pred CeeehhHHHHHhCCCeEEEEEecCCc---------------ceecCCCCEEEcCccccccc--cC------CCchhhhcc
Q 019238 1 MEAVITIDVLRRSGADVVVASVEKQL---------------RVDACHGVKIVADALVSNCR--DA------CGMPGATNL 57 (344)
Q Consensus 1 ~E~~~~~~~l~~~~~~~~~vs~~~~~---------------~v~~~~g~~~~~d~~~~~~~--~~------gG~~~~~~~ 57 (344)
+|+..|+++|+++|++++++|++++. .++++.|+.+.+|..+++++ ++ ||. +...+
T Consensus 26 ~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~~ 104 (396)
T 3uk7_A 26 YEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSKYDGLVIPGGR-APEYL 104 (396)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGGCSEEEECCBS-HHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCcccCCEEEECCCc-chhhc
Confidence 37889999999999999999998531 35677899999999998874 23 774 45667
Q ss_pred cCChHHHHHHHHHhhCCCEEEEEchhHHHHHHHcCCCCCCC-----------------------------CCCEEcCCCC
Q 019238 58 KESEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------------------------DGKVVTTRGP 108 (344)
Q Consensus 58 ~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------------------------dg~~iT~~g~ 108 (344)
..++.+++||+++++++++|++||+|+ ++|+++|||+||+ |||+|||+|+
T Consensus 105 ~~~~~~~~~l~~~~~~~~~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~ 183 (396)
T 3uk7_A 105 ALTASVVELVKEFSRSGKPIASICHGQ-LILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITPDVCVVDGSLITAATY 183 (396)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCCSSTTCEEEETTEEEESSG
T ss_pred ccCHHHHHHHHHHHHcCCEEEEECchH-HHHHhccccCCCEeecCcchHHHHHHCCCEEECCCCCcceEecCCEEEecCc
Confidence 889999999999999999999999999 5999999999987 8999999999
Q ss_pred CcHHHHHHHHHHHHcChhHHHHHhhcccccccCCCcceeeeccceeeecCCCCeEEEEeCCCcchhHHHHHHHHHHhcCC
Q 019238 109 GTPMEFVVALVEQLYGKGKADEVSGARVMRANHGDEFTIAEFNPVQWTFDNSPQILVPIANGSEEMEAVIIIDILRRAKA 188 (344)
Q Consensus 109 ~~~~~~~~~lv~~~~g~~~a~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ill~~g~~~~e~~~~~~~l~~~~~ 188 (344)
.+++||++++|+++.|++. .+++||+|+++|||++.|+..+++.|+++|+
T Consensus 184 ~~~~d~al~li~~l~g~~~------------------------------~~~~ki~ill~dg~~~~e~~~~~~~l~~ag~ 233 (396)
T 3uk7_A 184 EGHPEFIQLFVKALGGKIT------------------------------GANKRILFLCGDYMEDYEVKVPFQSLQALGC 233 (396)
T ss_dssp GGHHHHHHHHHHHTTCEEE------------------------------CCCCEEEEECCTTEEHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHHhccch------------------------------hccceEEEEecCCCcchhHHHHHHHHHHCCC
Confidence 9999999999999998641 2468999999999999999999999999999
Q ss_pred eEEEEEeCCCc---------------eeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHHh
Q 019238 189 NVVVASVADKL---------------EILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKE 253 (344)
Q Consensus 189 ~v~~~s~~~~~---------------~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~ 253 (344)
+++++|++++. .+.++.|..+.++..+++.++.+||+|+||||.+ ...+..++.+++||+++++
T Consensus 234 ~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~livpGg~~-~~~~~~~~~~~~~l~~~~~ 312 (396)
T 3uk7_A 234 QVDAVCPEKKAGDRCPTAIHDFEGDQTYSEKPGHTFALTTNFDDLVSSSYDALVIPGGRA-PEYLALNEHVLNIVKEFMN 312 (396)
T ss_dssp EEEEECTTCCTTCEECEEEEECCSSSSCEEEECCCEECCSCGGGCCGGGCSEEEECCBSH-HHHHTTCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCcccccccccccccchhhhcCCceeeccCCHHHCCcccCCEEEECCCcc-hhhhccCHHHHHHHHHHHH
Confidence 99999998862 1456789999999999998778999999999964 5557789999999999999
Q ss_pred cCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCC----cEEEeCCeEeCCCcccHHHHHHHHHHHhc
Q 019238 254 SNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIEN----RVVVDGNLVTSRGPGTSMEFALAIVEKFF 327 (344)
Q Consensus 254 ~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~----~~v~dg~liT~~g~~~~~~~~~~li~~l~ 327 (344)
++|+|+++|+|+ ++|+++|||+||++|+||...+.++. ..+.+. .+|+|||+|||+|+.+.+||++++|+++.
T Consensus 313 ~~~~i~aiC~g~-~~La~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~~~~~d~~l~li~~l~ 391 (396)
T 3uk7_A 313 SEKPVASICHGQ-QILAAAGVLKGRKCTAYPAVKLNVVLGGGTWLEPDPIDRCFTDGNLVTGAAWPGHPEFVSQLMALLG 391 (396)
T ss_dssp TTCCEEEEGGGH-HHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSSTTCEEEETTEEEESSGGGHHHHHHHHHHHHT
T ss_pred CCCEEEEEchHH-HHHHHcCCcCCCEEecCccHHHHHHHCCCEEEcCCCceeEEEcCCEEECCCchhHHHHHHHHHHHhc
Confidence 999999999997 45999999999999999999888765 334443 59999999999999999999999999998
Q ss_pred CH
Q 019238 328 GR 329 (344)
Q Consensus 328 g~ 329 (344)
|+
T Consensus 392 ~~ 393 (396)
T 3uk7_A 392 IQ 393 (396)
T ss_dssp CE
T ss_pred cc
Confidence 74
No 2
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=100.00 E-value=2.1e-39 Score=276.48 Aligned_cols=185 Identities=42% Similarity=0.655 Sum_probs=170.6
Q ss_pred CCCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 158 DNSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 158 ~~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
++++||+|+++|||++.|+..++++|+++|++++++|++++.++.+++|+.+.++..+++..+.+||+|+||||......
T Consensus 3 ~m~kkv~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~~~ 82 (190)
T 4e08_A 3 HMSKSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLNGGEAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGSNA 82 (190)
T ss_dssp -CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSSSCEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHHHH
T ss_pred CCCcEEEEEECCCchHHHHHHHHHHHHHCCCEEEEEECCCCcceecCCCcEEECCCCHHHCCcccCCEEEECCCChHHHH
Confidence 35689999999999999999999999999999999999983389999999999999999987778999999999654566
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhccC-CcC-CCcEEEeCCeEeCCCcccH
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSNQ-SEI-ENRVVVDGNLVTSRGPGTS 315 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~~-~~~-~~~~v~dg~liT~~g~~~~ 315 (344)
+..++.+++||+++++++|+|+++|+|+. +|+++|||+||++|+||...+.|++. .+. ++.+|+|||+|||+|+.++
T Consensus 83 ~~~~~~~~~~l~~~~~~~k~i~aiC~G~~-~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiTs~g~~a~ 161 (190)
T 4e08_A 83 MGESSLVGDLLRSQESGGGLIAAICAAPT-VLAKHGVASGKSLTSYPSMKPQLVNNYSYVDDKTVVKDGNLITSRGPGTA 161 (190)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETTTHH-HHHHTTCSTTCEECCCGGGGGGSSSSSEECSSCSEEEETTEEEECSGGGH
T ss_pred hhhCHHHHHHHHHHHHCCCEEEEECHHHH-HHHHCCCcCCCeEEeCcCHHHHHhcCCcccCCCcEEEECCEEECCChHHH
Confidence 78899999999999999999999999975 59999999999999999999999873 344 5899999999999999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 316 MEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 316 ~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
+||+++||++++|++.|+++++.|+++|
T Consensus 162 ~d~al~li~~~~g~~~a~~va~~l~~~~ 189 (190)
T 4e08_A 162 YEFALKIAEELAGKEKVQEVAKGLLVAY 189 (190)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHhhCccc
Confidence 9999999999999999999999999987
No 3
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=100.00 E-value=2.5e-38 Score=273.40 Aligned_cols=184 Identities=39% Similarity=0.612 Sum_probs=169.0
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
+++||+|+++|||++.|+..++++|+.+|++++++|++++.++.+++|+.+.++..++++++.+||+|+||||......+
T Consensus 8 m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~~~l 87 (208)
T 3ot1_A 8 MSKRILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQAF 87 (208)
T ss_dssp -CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSCSEEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHHHHH
T ss_pred cCCeEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCcceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHHHHH
Confidence 56899999999999999999999999999999999998623999999999999999999877799999999997546667
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhccCCcCCCcEEEe--CCeEeCCCcccHH
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSNQSEIENRVVVD--GNLVTSRGPGTSM 316 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~v~d--g~liT~~g~~~~~ 316 (344)
..++.+++||+++++++|+|+++|+|+.++|+++|||+||++|+||...+.|++..+.++.+++| ||+|||+|+.+++
T Consensus 88 ~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~vv~d~dg~iiTs~g~~a~~ 167 (208)
T 3ot1_A 88 ADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGARMTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGTAL 167 (208)
T ss_dssp HTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTCCBCCCGGGGGGSCTTTBCCSSEEEEGGGTEEEECSGGGHH
T ss_pred hhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCCEEEECccHHHHccCCccccCcEEEeCCCCEEECCCHHHHH
Confidence 88999999999999999999999999734599999999999999999999998877777788875 5999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHhhccc
Q 019238 317 EFALAIVEKFFGRNKALELAKILLFT 342 (344)
Q Consensus 317 ~~~~~li~~l~g~~~a~~~a~~l~~~ 342 (344)
||+++||++++|++.|+++++.|+++
T Consensus 168 d~al~lv~~l~G~~~a~~va~~l~~~ 193 (208)
T 3ot1_A 168 EFALAMIALLAGVELAQHVAAPMVLH 193 (208)
T ss_dssp HHHHHHHHHHHCHHHHHHHHGGGTCC
T ss_pred HHHHHHHHHhcCHHHHHHHHHhheeC
Confidence 99999999999999999999999984
No 4
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=100.00 E-value=3.2e-38 Score=270.61 Aligned_cols=184 Identities=41% Similarity=0.586 Sum_probs=168.9
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccc-cCCCccEEEEcCCccchHh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEA-AKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~-~~~~~D~liipGG~~~~~~ 237 (344)
+++||+|+++|||++.|+..++++|+++|++++++|++++.++.+++|+.+.++..+++. ++.+||+|+||||......
T Consensus 2 m~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~~~ 81 (197)
T 2rk3_A 2 ASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQN 81 (197)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHHHH
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCCccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhHHH
Confidence 458999999999999999999999999999999999987558999999999999999987 7789999999999644566
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhccC---CcCCCcEEEeCCeEeCCCccc
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSNQ---SEIENRVVVDGNLVTSRGPGT 314 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~~---~~~~~~~v~dg~liT~~g~~~ 314 (344)
+..++.+++||+++++++|+|+++|+|+. +|+++|+|+||++|+||...+.|++. .+.++.+|+|||+|||+|+.+
T Consensus 82 l~~~~~~~~~l~~~~~~gk~i~aiC~G~~-~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~~~v~Dg~iiTs~g~~a 160 (197)
T 2rk3_A 82 LSESAAVKEILKEQENRKGLIATICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGT 160 (197)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETTTHH-HHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCCSEEEETTEEEECSGGG
T ss_pred hhhCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCCCEEEeCCEEECCCHHH
Confidence 77899999999999999999999999975 59999999999999999999999763 267889999999999999999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 315 SMEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 315 ~~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
++||++++|+++.|++.|+++++.|.+++
T Consensus 161 ~~d~al~li~~l~g~~~a~~va~~~~~~~ 189 (197)
T 2rk3_A 161 SFEFALAIVEALNGKEVAAQVKAPLVLKD 189 (197)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHGGGTC--
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999875
No 5
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=1.2e-37 Score=268.53 Aligned_cols=184 Identities=43% Similarity=0.632 Sum_probs=171.8
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCc--eeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKL--EILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~--~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
++||+|+++|||++.|+..++++|+++|++++++|++++. ++.+++|+.+.++..+++.++.+||+|+||||......
T Consensus 2 ~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~~~ 81 (205)
T 2ab0_A 2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAEC 81 (205)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHH
T ss_pred CcEEEEEEcCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCCceeecCCCeEEecCCCHHHCCcccCCEEEECCCcccHHH
Confidence 5799999999999999999999999999999999999854 89999999999999999987789999999999655666
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhccCCcCCCcEEEeCCe--EeCCCcccH
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSNQSEIENRVVVDGNL--VTSRGPGTS 315 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~v~dg~l--iT~~g~~~~ 315 (344)
+..++.+++||+++++++|+|+++|+|++++|+++|||+||++|+||...+.+++..+.+..+|+|||+ |||+|+.++
T Consensus 82 l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~~T~~~~~~~~~~~~~~~~~~vv~Dg~i~viTs~g~~s~ 161 (205)
T 2ab0_A 82 FRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTA 161 (205)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSCBCCCGGGGGGSCTTTBCCCSEEEETTTTEEEECSGGGH
T ss_pred hccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCeEEeCccHHHHccCCEEecCCEEEeCCcCeEECcChhhH
Confidence 778999999999999999999999999734599999999999999999999999877888899999999 999999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 316 MEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 316 ~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
++|++++|+++.|++.|+++++.|++++
T Consensus 162 ~d~al~li~~l~g~~~a~~va~~l~~~~ 189 (205)
T 2ab0_A 162 IDFGLKIIDLLVGREKAHEVASQLVMAA 189 (205)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTTTCCT
T ss_pred HHHHHHHHHHhcChHHHHHHHHhcccCC
Confidence 9999999999999999999999999975
No 6
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=100.00 E-value=8.1e-38 Score=266.96 Aligned_cols=182 Identities=26% Similarity=0.409 Sum_probs=164.0
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCC--ceeeeccceeeeeccccccccC-----CCccEEEEcCC
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADK--LEILASCQVKLVADMLIDEAAK-----LSYDLIVLPGG 231 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~--~~v~~~~g~~v~~~~~~~~~~~-----~~~D~liipGG 231 (344)
+|+||+|+++|||++.|+..|+++|+++|+++++++...+ .++.+++|+.+.+|..++++.. .+||+|+||||
T Consensus 3 ~M~kV~ill~dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPGG 82 (194)
T 4gdh_A 3 HMVKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGG 82 (194)
T ss_dssp --CCEEEEEETTCCHHHHHHHHHHHHHTTCCEEEEEESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECCC
T ss_pred CCCEEEEEECCCcCHHHHHHHHHHHHHCCCeEEEEEEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEEECCC
Confidence 5789999999999999999999999999999999987542 3688899999999999988743 35999999999
Q ss_pred ccchHhhhcCHHHHHHHHHHHhc-CCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCCcEEEeCCeEe
Q 019238 232 LGGAQAFAKSKKLVNMLKKQKES-NRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIENRVVVDGNLVT 308 (344)
Q Consensus 232 ~~~~~~l~~~~~l~~~l~~~~~~-~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~~~v~dg~liT 308 (344)
..+...+.+++.+++||++++++ +|+|+++|+|+ + |+.+|+|+||++|+||...+.+++ ..+.++++|+|||+||
T Consensus 83 ~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~-~-l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d~~vV~Dg~iiT 160 (194)
T 4gdh_A 83 GLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGT-L-TAKTSGLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLIT 160 (194)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGG-H-HHHHTTCCCSEECCCGGGHHHHHHTTCEECCSSEEEETTEEE
T ss_pred chhHhHhhhCHHHHHHHHHhhhcCCceEEeecccc-c-chhhceecCCceEecCcHHHHHHhcCCeeecceEEEcCCEEE
Confidence 76678888999999999999865 79999999996 5 788899999999999999999986 4678899999999999
Q ss_pred CCCcccHHHHHHHHHHHhcCHHHHHHHHHhhccc
Q 019238 309 SRGPGTSMEFALAIVEKFFGRNKALELAKILLFT 342 (344)
Q Consensus 309 ~~g~~~~~~~~~~li~~l~g~~~a~~~a~~l~~~ 342 (344)
|+|+.++++|+++||++++|++.|+++++.|+++
T Consensus 161 s~g~~~~~d~al~lve~l~G~~~a~~va~~l~~P 194 (194)
T 4gdh_A 161 SQGPGTAMLFGLKLLEQVASKDKYNAVYKSLSMP 194 (194)
T ss_dssp ECSGGGHHHHHHHHHHHHSCHHHHHHHHHHTTCC
T ss_pred CCCHhHHHHHHHHHHHHHcCHHHHHHHHhhccCC
Confidence 9999999999999999999999999999999875
No 7
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=100.00 E-value=4.7e-38 Score=271.66 Aligned_cols=181 Identities=15% Similarity=0.187 Sum_probs=162.9
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcC-------CeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAK-------ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~-------~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG 231 (344)
+++||+|+++|||++.|+..+.++|+.+| |+++++|.+++ +|.+++|+.+.+|..+++. ++||+|+||||
T Consensus 7 ~~~~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~-~v~~~~G~~v~~d~~~~~~--~~~D~livpGg 83 (209)
T 3er6_A 7 KNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNR-PLIGRGGISVQPTAQWQSF--DFTNILIIGSI 83 (209)
T ss_dssp CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSS-CEEETTTEEEECSSCGGGC--SCCSEEEECCC
T ss_pred CCeEEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCC-ceecCCCeEEeCCcCcccc--CCCCEEEECCC
Confidence 46899999999999999999999999885 89999999986 9999999999999999987 78999999999
Q ss_pred ccchH-hhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc----CCc-CCCcEEEeCC
Q 019238 232 LGGAQ-AFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN----QSE-IENRVVVDGN 305 (344)
Q Consensus 232 ~~~~~-~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~----~~~-~~~~~v~dg~ 305 (344)
..... .+..++.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++ ..+ .++.+|+|||
T Consensus 84 ~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~-~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~~v~Dg~ 162 (209)
T 3er6_A 84 GDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGI-FVVAKAGLLQQNKAVMHSYFAHLFGELFPEIMLMTEQKALIDGN 162 (209)
T ss_dssp SCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHHTCCSSCEECCCHHHHHHHHHHCTTSEECTTCSEEEETT
T ss_pred CCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHH-HHHHHcCCCCCCeeEECHHHHHHHHHHCCCcEEecCCEEEEeCC
Confidence 64322 23679999999999999999999999997 55999999999999999998888865 233 4567999999
Q ss_pred eEeCCCcccHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 306 LVTSRGPGTSMEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 306 liT~~g~~~~~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
+|||+|+.+++||+++||++++|++.|+++++.|++++
T Consensus 163 iiTs~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~ 200 (209)
T 3er6_A 163 VYLSSGPYSHSSVMLEIVEEYFGKHTRNLGNQFLSTIE 200 (209)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHCHHHHHHHHHHTTC--
T ss_pred EEECCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999975
No 8
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=100.00 E-value=1.3e-37 Score=272.59 Aligned_cols=180 Identities=25% Similarity=0.357 Sum_probs=167.2
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHh-cCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRR-AKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~-~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
+++||+|+++|||++.|+..++++|+. .+++++++|.+++ +|.+++|+.+.++.++++. ++||+|+||||.+ ...
T Consensus 4 m~~~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~-~V~~~~G~~v~~d~~l~~~--~~~D~livpGG~g-~~~ 79 (231)
T 3noq_A 4 MAVQIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPG-PVVASSGLVLQATTSFADC--PPLDVICIPGGTG-VGA 79 (231)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSE-EEECTTSCEEEECEETTTC--CCCSEEEECCSTT-HHH
T ss_pred CcEEEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCC-cEEcCCCCEEecccChhHC--CcCCEEEECCCCC-hhh
Confidence 568999999999999999999999999 7899999999986 9999999999999999987 6799999999964 556
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCCcEEEeCCeEeCCCcccH
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIENRVVVDGNLVTSRGPGTS 315 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~~~v~dg~liT~~g~~~~ 315 (344)
+..++.+++||+++++++++|+++|+|+ ++|+++|||+||++|+||...+.|++ ..+.++.+|+|||+|||+|++++
T Consensus 80 ~~~~~~l~~~lr~~~~~g~~v~aiC~G~-~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~ 158 (231)
T 3noq_A 80 LMEDPQALAFIRQQAARARYVTSVSTGS-LVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHERVVRDGNLLTGGGITAG 158 (231)
T ss_dssp HTTCHHHHHHHHHHHTTCSEEEEETTHH-HHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCSSEEEETTEEEECSTTHH
T ss_pred hccCHHHHHHHHHHHhcCCEEEEECHHH-HHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCCcEEEeCCEEECCCHHHH
Confidence 7789999999999999999999999997 55999999999999999999998875 34568899999999999999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 316 MEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 316 ~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
+||+++||++++|++.|+++++.|+|++
T Consensus 159 ~d~aL~li~~~~G~~~A~~va~~l~~~~ 186 (231)
T 3noq_A 159 IDFALTLAAELFDAATAQRVQLQLEYAP 186 (231)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHcCHHHHHHHHHhceeCC
Confidence 9999999999999999999999999974
No 9
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=7.5e-38 Score=270.69 Aligned_cols=180 Identities=22% Similarity=0.342 Sum_probs=165.5
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhc--CCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRA--KANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~--~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+++||+|+++|||++.|+..++++|+++ +++++++|++++ +|.+++|+.+.+|..+++. ++||+|+||||.+ ..
T Consensus 3 ~~~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~-~V~~~~G~~v~~d~~~~~~--~~~D~livpGG~~-~~ 78 (211)
T 3mgk_A 3 LSYRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGG-LVESSQKVRVETSLYTRDE--NIEKILFVPGGSG-TR 78 (211)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCE-EEECTTCCEEEEBCCCCCS--SSEEEEEECCSTH-HH
T ss_pred CceEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCC-eEecCCCcEEEeccchhhC--CCCCEEEECCCcc-hh
Confidence 5689999999999999999999999998 499999999986 9999999999999999887 5699999999964 55
Q ss_pred hhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhccC----Cc-CCCcEEEeCCeEeCCC
Q 019238 237 AFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSNQ----SE-IENRVVVDGNLVTSRG 311 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~~----~~-~~~~~v~dg~liT~~g 311 (344)
.+..++.+++||+++++++|+|+++|+|+ ++|+++|||+||++|+||...+.|++. .+ .++.+|+|||+|||+|
T Consensus 79 ~~~~~~~~~~~l~~~~~~~k~iaaiC~G~-~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G 157 (211)
T 3mgk_A 79 EKVNDDNFINFIGNMVKESKYIISVCTGS-ALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEARWVKDGNIYTSSG 157 (211)
T ss_dssp HHTTCHHHHHHHHHHHHHCSEEEECTTHH-HHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSCSEEEETTEEEECS
T ss_pred hhcCCHHHHHHHHHHHHcCCEEEEEchHH-HHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCCeEEEeCCEEECCC
Confidence 66789999999999999999999999997 559999999999999999999998763 23 4789999999999999
Q ss_pred cccHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 312 PGTSMEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 312 ~~~~~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
+.+++||+++||++++|++.|+++++.|++++
T Consensus 158 ~~a~~dlal~lv~~~~G~~~A~~va~~l~~~~ 189 (211)
T 3mgk_A 158 VSAGIDMTLGFIEDLIGKEKALEISRSIEYFW 189 (211)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHhcEECC
Confidence 99999999999999999999999999999985
No 10
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=100.00 E-value=4.1e-38 Score=270.61 Aligned_cols=179 Identities=20% Similarity=0.283 Sum_probs=160.8
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcC------CeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCc
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAK------ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL 232 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~------~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~ 232 (344)
+++||+|+++|||++.|+..+.++|+.+| |+++++|.+++ ++.+++|+.+.+| ++++.+.++||+|+||||.
T Consensus 4 ~~~~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~-~v~~~~G~~i~~d-~l~~~~~~~~D~livpGG~ 81 (202)
T 3gra_A 4 APYRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGD-RVLSDLGLELVAT-ELSAAALKELDLLVVCGGL 81 (202)
T ss_dssp -CEEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSS-EEEBTTSCEEECE-ECCSGGGTTCSEEEEECCT
T ss_pred CcEEEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC-ceEcCCCCEEECC-CcccccCCCCCEEEEeCCC
Confidence 46899999999999999999999999987 99999999986 9999999999999 9998766899999999996
Q ss_pred cchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc----CCcCCCcEEEeCCeEe
Q 019238 233 GGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN----QSEIENRVVVDGNLVT 308 (344)
Q Consensus 233 ~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~----~~~~~~~~v~dg~liT 308 (344)
... .. . +.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++ ..+.++.+|+|||+||
T Consensus 82 ~~~-~~-~-~~l~~~l~~~~~~g~~iaaIC~G~-~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~v~dg~iiT 157 (202)
T 3gra_A 82 RTP-LK-Y-PELDRLLNDCAAHGMALGGLWNGA-WFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLS 157 (202)
T ss_dssp TCC-SC-C-TTHHHHHHHHHHHTCEEEEETTHH-HHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEECSSSEEEETTEEE
T ss_pred chh-hc-c-HHHHHHHHHHHhhCCEEEEECHHH-HHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEecCCeEEEeCCEEE
Confidence 533 22 4 899999999999999999999997 55999999999999999999887765 3456679999999999
Q ss_pred CCCcccHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 309 SRGPGTSMEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 309 ~~g~~~~~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
|+|+++++||+++||++++|++.|+++++.|++++
T Consensus 158 s~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~ 192 (202)
T 3gra_A 158 AASPNGAMELMLGLVRRLYGDGLAEGVEEILSFSG 192 (202)
T ss_dssp ESSHHHHHHHHHHHHHHHHCHHHHHHHHHHHC---
T ss_pred CCCHHHHHHHHHHHHHHHhCHHHHHHHHHHhCcCc
Confidence 99999999999999999999999999999999986
No 11
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=100.00 E-value=2.7e-37 Score=273.46 Aligned_cols=182 Identities=20% Similarity=0.290 Sum_probs=167.1
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHH-HhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDIL-RRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l-~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
+++||+|+++|||++.|+..++++| +..+++++++|.+++ +|.+++|+.+.+|..++++. ..||+|+||||..+...
T Consensus 22 m~~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~-~V~~~~G~~i~~d~~l~~~~-~~yD~liVPGG~~g~~~ 99 (253)
T 3ewn_A 22 GDEQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLD-PVTSDAGLAIVPTATFGTCP-RDLTVLFAPGGTDGTLA 99 (253)
T ss_dssp CCCEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSS-CEECTTSCEECCSEETTTSC-SSCSEEEECCBSHHHHH
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCC-eEEcCCCCEEeCCcCHHHcC-CCCCEEEECCCccchhh
Confidence 4589999999999999999999999 567899999999997 99999999999999999875 47899999999623456
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCCcEEEeCCeEeCCCcccH
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIENRVVVDGNLVTSRGPGTS 315 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~~~v~dg~liT~~g~~~~ 315 (344)
+..++.+++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++ ..+.++.+|+|||+|||+|++++
T Consensus 100 l~~~~~l~~~Lr~~~~~gk~IaaICtG~-~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~ 178 (253)
T 3ewn_A 100 AASDAETLAFMADRGARAKYITSVCSGS-LILGAAGLLKGYKATSHWSCRDALAGFGAIPTEARVVRDRNRITGAGVTAG 178 (253)
T ss_dssp HTTCHHHHHHHHHHHTTCSEEEEETTHH-HHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCSSEEEETTEEEECSTTHH
T ss_pred hccCHHHHHHHHHHHHcCCEEEEEChHH-HHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCCcEEEECCEEECCCHHHH
Confidence 7789999999999999999999999997 55999999999999999999998875 34568899999999999999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 316 MEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 316 ~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
+||+++||++++|++.|+++++.|+|++
T Consensus 179 idlaL~lv~~l~G~~~A~~va~~l~~~~ 206 (253)
T 3ewn_A 179 LDFGLSMVAELRDQTYAECAQLMSEYDP 206 (253)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHcCHHHHHHHHHhcccCC
Confidence 9999999999999999999999999974
No 12
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=100.00 E-value=4.1e-37 Score=257.85 Aligned_cols=166 Identities=20% Similarity=0.245 Sum_probs=155.0
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~ 239 (344)
+++|.|++.+||++.|+..|+++|+++|++++++|++++ ++++++|..+.+|..++++++.+||+|+||||++ ...+.
T Consensus 8 ~~~v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~~-~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~g-~~~l~ 85 (177)
T 4hcj_A 8 NNILYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFIG-TAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGIG-CITLW 85 (177)
T ss_dssp CEEEEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSSE-EEEETTSCEEEECEEGGGCCGGGCSEEEECCSGG-GGGGT
T ss_pred CCEEEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-eEeeCCCCEEecCccHHHCCHhHCCEEEECCCcc-HHHHh
Confidence 466778889999999999999999999999999999997 9999999999999999999889999999999975 56788
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCCcEEEeCCeEeCCCcccHHH
Q 019238 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIENRVVVDGNLVTSRGPGTSME 317 (344)
Q Consensus 240 ~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~~~v~dg~liT~~g~~~~~~ 317 (344)
.++.+++||+++++++|+|++||+|++ +|+++|||+||++|+||...+.+++ ..+.++++|+|||+|||+|+.++++
T Consensus 86 ~~~~~~~~l~~~~~~~k~iaaIC~g~~-~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~vV~Dg~liTs~g~~~~~~ 164 (177)
T 4hcj_A 86 DDWRTQGLAKLFLDNQKIVAGIGSGVV-IMANAKILEEINVTCLSADESHVRHGNANIMSENVVVSGNIVTANGPTSSKD 164 (177)
T ss_dssp TCHHHHHHHHHHHHTTCEEEEETTHHH-HHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGGHHH
T ss_pred hCHHHHHHHHHHHHhCCEEEEecccHH-HHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCCEEEECCEEECCCHHHHHH
Confidence 999999999999999999999999985 4999999999999999999999876 5678899999999999999999999
Q ss_pred HHHHHHHHhcC
Q 019238 318 FALAIVEKFFG 328 (344)
Q Consensus 318 ~~~~li~~l~g 328 (344)
|+++|++.|.+
T Consensus 165 ~a~~lve~L~s 175 (177)
T 4hcj_A 165 FANAVVGVLNS 175 (177)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999864
No 13
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=100.00 E-value=7.6e-36 Score=258.48 Aligned_cols=178 Identities=21% Similarity=0.246 Sum_probs=161.6
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHH--------hcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILR--------RAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~--------~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG 231 (344)
|+||+|+++|||++.|+..+.++|+ +.+++++++|++++ +|.+++|+.+.+|..++++.+.+||+|+||||
T Consensus 5 m~~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~-~v~~~~G~~i~~d~~~~~~~~~~~D~livpGG 83 (212)
T 3efe_A 5 TKKAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKE-MITTMGGLRIKPDISLDECTLESKDLLILPGG 83 (212)
T ss_dssp CCCEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSC-CEECTTCCEECCSEEGGGCCCCTTCEEEECCC
T ss_pred ccEEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCC-eEEcCCCCEEecCcCHHHCCccCCCEEEECCC
Confidence 6899999999999999999999999 67899999999997 99999999999999999987779999999999
Q ss_pred ccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCc-Cchhhhcc-----CCcCCCcEEEeCC
Q 019238 232 LGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFP-AMCNKLSN-----QSEIENRVVVDGN 305 (344)
Q Consensus 232 ~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~-~~~~~~~~-----~~~~~~~~v~dg~ 305 (344)
... .+..++.+++||+++++++++|+++|+|+ ++|+++|||+||++|+|| ...+.|++ ..+.++.+|+|||
T Consensus 84 ~~~--~~~~~~~l~~~l~~~~~~gk~iaaiC~G~-~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~~~~~~~~~~V~Dg~ 160 (212)
T 3efe_A 84 TTW--SEEIHQPILERIGQALKIGTIVAAICGAT-DALANMGYLDTRKHTSNNLEYTKMVCPNYKGEKFYELGPAVSDAN 160 (212)
T ss_dssp SCT--TSGGGHHHHHHHHHHHHHTCEEEEETHHH-HHHHHTTTTSSSCBCCSCHHHHHHHCTTCCCTTTBCCCSEEEETT
T ss_pred Ccc--ccccCHHHHHHHHHHHHCCCEEEEEcHHH-HHHHHcCCCCCCeeecCCHHHHHHHHhhCCCccccCCCcEEEECC
Confidence 642 34688999999999999999999999997 559999999999999996 66666653 3567899999999
Q ss_pred eEeCCCcccHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 306 LVTSRGPGTSMEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 306 liT~~g~~~~~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
+|||+|++ ++||+++||+++.|+ .++++++.+.+.+
T Consensus 161 iiTs~G~~-~~d~al~li~~l~g~-~a~~va~~~~~~~ 196 (212)
T 3efe_A 161 LVTASGIA-PLEFAMEVLKKIDVF-TLDALHSWYNLNK 196 (212)
T ss_dssp EEEECTTC-HHHHHHHHHHHHTCS-CHHHHHHHHHHHH
T ss_pred EEECCCch-HHHHHHHHHHHhcCC-CHHHHHHHHHHHc
Confidence 99999986 999999999999998 9999999998764
No 14
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=100.00 E-value=2.2e-35 Score=258.60 Aligned_cols=178 Identities=21% Similarity=0.318 Sum_probs=161.6
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcC--CeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAK--ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~--~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+++||+|+++|||++.|+..++++|+..+ ++++++| +++ ++.+++|+.+.++..+++. .+||+|+||||..+..
T Consensus 19 ~~~kV~ill~dGf~~~e~~~p~dvl~~~~~~~~v~~vs-~~~-~V~ss~G~~v~~d~~l~~~--~~~D~liVPGG~~g~~ 94 (236)
T 3bhn_A 19 GMYKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILG-TKP-EHHSQLGMTVKTDGHVSEV--KEQDVVLITSGYRGIP 94 (236)
T ss_dssp -CEEEEEECCTTBCHHHHHHHHHHHTTCSSSEEEEEEE-SSS-EEEBTTCCEEECSEEGGGG--GGCSEEEECCCTTHHH
T ss_pred CCCEEEEEeCCCChHHHHHHHHHHHHcCCCCEEEEEEE-CCC-cEEecCCcEEecCcccccc--cCCCEEEEcCCccCHh
Confidence 46899999999999999999999999976 8999999 876 9999999999999999885 7899999999942345
Q ss_pred hhhcCHHHHHHHHHHHhcCC-cEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCCcEEEeCCeEeCCCcc
Q 019238 237 AFAKSKKLVNMLKKQKESNR-PYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIENRVVVDGNLVTSRGPG 313 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k-~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~~~v~dg~liT~~g~~ 313 (344)
.+..++.+++|| ++.+++ +|+++|+|+. +|+++|||+||++|+||...+.|++ ..+.++.+|+|||+|||+|+.
T Consensus 95 ~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~-lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~~vV~Dg~iiTs~G~~ 171 (236)
T 3bhn_A 95 AALQDENFMSAL--KLDPSRQLIGSICAGSF-VLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDLPLVIEGNIATAGGCL 171 (236)
T ss_dssp HHHTCHHHHHHC--CCCTTTCEEEEETTHHH-HHHHTTTTTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGG
T ss_pred hhccCHHHHHHH--HhCCCCCEEEEEcHHHH-HHHHcCCCCCCEEECCHHHHHHHHHhCCccCCCcEEEeCCEEECCCHH
Confidence 567899999999 667777 9999999975 5999999999999999999999976 456889999999999999999
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 314 TSMEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 314 ~~~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
+++||+++||++++|++.|+++++.|++++
T Consensus 172 a~~dlal~lIe~l~G~~~A~~va~~l~~~~ 201 (236)
T 3bhn_A 172 SLLYLVGWLAERLFDSVKRKQIQNQLIPAG 201 (236)
T ss_dssp GHHHHHHHHHHHHSCHHHHHHHHTTTSCTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHhcccCC
Confidence 999999999999999999999999999986
No 15
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=100.00 E-value=2.7e-35 Score=246.08 Aligned_cols=164 Identities=27% Similarity=0.445 Sum_probs=152.4
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~ 239 (344)
+|||+|+++|||++.|+..+++.|+.+|++++++|++++ ++.+++|+.+.++..+++.++.+||+|+||||.+ ...+.
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~-~~~~~ 79 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRG-KITGKHGYSVNVDLTFEEVDPDEFDALVLPGGKA-PEIVR 79 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSE-EEECTTSCEEEECEEGGGCCGGGCSEEEECCBSH-HHHHT
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-EEecCCCcEEeccCChhHCCHhhCCEEEECCCcC-HHHhc
Confidence 589999999999999999999999999999999999996 9999999999999999998767899999999964 55667
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCCcEEEeCCeEeCCCcccHHH
Q 019238 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIENRVVVDGNLVTSRGPGTSME 317 (344)
Q Consensus 240 ~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~~~v~dg~liT~~g~~~~~~ 317 (344)
.++.+++||+++++++|+|+++|+|+. +|+++|+|+||++|+||...+.|++ ..+.++.+|+|||+|||+|+.++++
T Consensus 80 ~~~~l~~~l~~~~~~~k~i~aiC~G~~-~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~d 158 (168)
T 3l18_A 80 LNEKAVMITRRMFEDDKPVASICHGPQ-ILISAKVLKGRRGTSTITIRDDVINAGAEWIDAEVVVDGNWVSSRHPGDLYA 158 (168)
T ss_dssp TCHHHHHHHHHHHHTTCCEEEETTTHH-HHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGHHH
T ss_pred cCHHHHHHHHHHHHCCCEEEEECHhHH-HHHHCCccCCCEEEeCccHHHHHHhCCCEEecCCEEEeCCEEEcCCHHHHHH
Confidence 899999999999999999999999975 5999999999999999999999987 3457889999999999999999999
Q ss_pred HHHHHHHHh
Q 019238 318 FALAIVEKF 326 (344)
Q Consensus 318 ~~~~li~~l 326 (344)
|++++|+++
T Consensus 159 ~~l~li~~l 167 (168)
T 3l18_A 159 WMREFVKLL 167 (168)
T ss_dssp HHHHHGGGC
T ss_pred HHHHHHHhh
Confidence 999999876
No 16
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=100.00 E-value=3.5e-35 Score=250.30 Aligned_cols=173 Identities=25% Similarity=0.385 Sum_probs=155.6
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeee-----ccceeeeeccccccccCCCccEEEEcCCcc
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILA-----SCQVKLVADMLIDEAAKLSYDLIVLPGGLG 233 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~-----~~g~~v~~~~~~~~~~~~~~D~liipGG~~ 233 (344)
+++||+|+++|||++.|+..+.++|+.+|+++++++++++ ++.+ +.|+.+.++..+++.++.+||+|+||||..
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~ 86 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPG-EIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTV 86 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSS-EEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCC-ccccccccccCCcEEeCCCChhhCChhhCCEEEECCCch
Confidence 3589999999999999999999999999999999999997 8887 779999999999988777899999999964
Q ss_pred chHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCCcEEEeCCeEeCCC
Q 019238 234 GAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIENRVVVDGNLVTSRG 311 (344)
Q Consensus 234 ~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~~~v~dg~liT~~g 311 (344)
....+..++.+++||+++++++++|+++|+|+. +|+++|||+||++|+||...+.|++ ..+.+..+++|||+|||+|
T Consensus 87 ~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~-~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~~~~v~Dg~iiTs~g 165 (190)
T 2vrn_A 87 NPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPW-SLSETGIAQGLKMTSWSSLKRELTLAGAQWVDEECVTDKGVVTSRK 165 (190)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTH-HHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSCEEETTEEECSS
T ss_pred hHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHH-HHHhCcccCCcEEecCccHHHHHHHcCCeEECCCEEEcCCEEEcCC
Confidence 456677899999999999999999999999975 5999999999999999999998876 3455666788999999999
Q ss_pred cccHHHHHHHHHHHh-cCHHHHH
Q 019238 312 PGTSMEFALAIVEKF-FGRNKAL 333 (344)
Q Consensus 312 ~~~~~~~~~~li~~l-~g~~~a~ 333 (344)
+.++.+|++++|+++ .|++.|+
T Consensus 166 ~~s~~~~~l~li~~l~~g~~~a~ 188 (190)
T 2vrn_A 166 PDDLPAFNKKIVEEFAEGDHSSR 188 (190)
T ss_dssp GGGHHHHHHHHHHHHHHCCCGGG
T ss_pred hhhHHHHHHHHHHHHhccccccc
Confidence 999999999999999 8887664
No 17
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=1.8e-34 Score=248.15 Aligned_cols=175 Identities=25% Similarity=0.330 Sum_probs=153.8
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhc-CCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRA-KANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~-~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
|+||+|+++|||++.|+..+.+.|+++ +++++++|++++ +.+++|+.+.++..+++. +.+||+|+||||.+ ...
T Consensus 3 m~kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~~--V~~~~G~~v~~d~~l~~~-~~~~D~livpGG~~-~~~- 77 (206)
T 3f5d_A 3 LKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPI--VSSIGGFKTSVDYIIGLE-PANFNLLVMIGGDS-WSN- 77 (206)
T ss_dssp CEEEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSE--EEBTTSCEEECSEETTSS-CSCCSEEEECCBSC-CCC-
T ss_pred ccEEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCCC--EEecCCcEEecCcChhhC-CcCCCEEEEcCCCC-hhh-
Confidence 689999999999999999999999998 999999999984 899999999999999987 45899999999964 333
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCch-hhhc----cCCcCCCcEEEeCCeEeCCCcc
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMC-NKLS----NQSEIENRVVVDGNLVTSRGPG 313 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~-~~~~----~~~~~~~~~v~dg~liT~~g~~ 313 (344)
.++.+++||+++++++++|++||+|+ ++|+++|||+||++|+||... ..++ +..+.++.+|+|||+|||+|++
T Consensus 78 -~~~~l~~~l~~~~~~gk~iaaiC~G~-~~La~aGLL~Gr~aTthw~~~~~~~~~~~~~~~~~~~~~V~Dg~iiTs~G~a 155 (206)
T 3f5d_A 78 -DNKKLLHFVKTAFQKNIPIAAICGAV-DFLAKNGLLNNHSHTGNFVYLWKDYKQYKPISSFVEKQAVRDKNLVTANGTA 155 (206)
T ss_dssp -CCHHHHHHHHHHHHTTCCEEEETHHH-HHHHHTTTTTTSCBCCSCGGGGTTCTTCCCSSCBCCSSEEEETTEEEECTTC
T ss_pred -cCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHcCCCCCCEEEccCHHHhhhhHhhcCCCeEccCCEEEECCEEECCCch
Confidence 89999999999999999999999997 559999999999999998321 1121 2456788999999999999986
Q ss_pred cHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 019238 314 TSMEFALAIVEKFFGRNKALELAKILLFTR 343 (344)
Q Consensus 314 ~~~~~~~~li~~l~g~~~a~~~a~~l~~~~ 343 (344)
++||+++||+.+ +.+.|+++++.|++.+
T Consensus 156 -~id~al~li~~l-~~~~a~~va~~~~~~~ 183 (206)
T 3f5d_A 156 -PIEFTNLILEMI-DFDTPENIEKMMYMNR 183 (206)
T ss_dssp -HHHHHHHHHHHT-TCSCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHh-CcchHHHHHHHhhhhh
Confidence 999999999975 5789999999998753
No 18
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=8.1e-34 Score=242.30 Aligned_cols=171 Identities=25% Similarity=0.333 Sum_probs=154.8
Q ss_pred eeecCCCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCce-eeeccce-eeeeccccccccCCCccEEEEcCC
Q 019238 154 QWTFDNSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLE-ILASCQV-KLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 154 ~~~~~~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~-v~~~~g~-~v~~~~~~~~~~~~~~D~liipGG 231 (344)
.+...+++||+|+++|||++.|+..+.+.|+++|+++++++++++ + +.+++|+ .+.++..+++.++.+||+|+||||
T Consensus 17 ~~~~~~~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-~~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG 95 (193)
T 1oi4_A 17 YKKAGLSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAG-KTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGG 95 (193)
T ss_dssp TTTTTCCCEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTT-CEEECTTSSCEEECCEEGGGCCGGGCSEEEECCB
T ss_pred ehhhccCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCC-cceecCCCCeEEECCCChHHCCcccCCEEEECCC
Confidence 334456789999999999999999999999999999999999987 6 9999999 999999999886678999999999
Q ss_pred ccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCCcEEEeCC-eEe
Q 019238 232 LGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIENRVVVDGN-LVT 308 (344)
Q Consensus 232 ~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~~~v~dg~-liT 308 (344)
. +...+..++.+++||+++++++|+|+++|+|+. +|+++|+|+||++|+||...+.|++ ..+.++.+|+||| +||
T Consensus 96 ~-~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~-lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~~v~Dg~~iiT 173 (193)
T 1oi4_A 96 H-SPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQ-LLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVT 173 (193)
T ss_dssp T-HHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHH-HHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTTEEE
T ss_pred c-CHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHH-HHHHCCccCCCEEEeChhHHHHHHHcCCEEecCCEEEECCEEEE
Confidence 5 456667789999999999999999999999974 5999999999999999999999976 4566778899999 999
Q ss_pred CCCcccHHHHHHHHHHHhc
Q 019238 309 SRGPGTSMEFALAIVEKFF 327 (344)
Q Consensus 309 ~~g~~~~~~~~~~li~~l~ 327 (344)
|+|+.+++||+++||+++.
T Consensus 174 s~g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 174 SRTPDDLPAFNREALRLLG 192 (193)
T ss_dssp ESSGGGHHHHHHHHHHHHC
T ss_pred CCCcchHHHHHHHHHHHhh
Confidence 9999999999999999874
No 19
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=100.00 E-value=4.9e-34 Score=242.79 Aligned_cols=176 Identities=20% Similarity=0.293 Sum_probs=156.4
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHh-cCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRR-AKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~-~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
|+||+|+++|||++.|+..+.+.|++ .+++++++|++++ ++.+++|+.+.++..+++..+.+||+|+||||.. . ..
T Consensus 1 m~~i~ill~~g~~~~e~~~~~~~l~~a~~~~v~~vs~~~~-~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~-~-~~ 77 (188)
T 2fex_A 1 MTRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGM-PVTSMGGLKVTPDTSYDALDPVDIDALVIPGGLS-W-EK 77 (188)
T ss_dssp CCEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSS-CEECTTCCEEECSEEGGGCCTTTCSEEEECCBSH-H-HH
T ss_pred CcEEEEEeCCCchHHHHHHHHHHHhhcCCceEEEEeCCCC-ceeeCCCcEEeccccHHHCCcccCCEEEECCCCc-c-cc
Confidence 47999999999999999999999999 9999999999987 9999999999999999998666899999999964 2 34
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc----C-CcCCCc-EEEeCCeEeCCCc
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN----Q-SEIENR-VVVDGNLVTSRGP 312 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~----~-~~~~~~-~v~dg~liT~~g~ 312 (344)
..++.+++||+++++++|+|+++|+|+. +|+++|||+||++|+||...+.+++ . .+.++. +|+|||+|||+|+
T Consensus 78 ~~~~~l~~~l~~~~~~~k~i~aiC~G~~-~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~ 156 (188)
T 2fex_A 78 GTAADLGGLVKRFRDRDRLVAGICAAAS-ALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQPRAVSDGGVVTAAGS 156 (188)
T ss_dssp TCCCCCHHHHHHHHHTTCEEEEETHHHH-HHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCSSCEEETTEEEECTT
T ss_pred cccHHHHHHHHHHHHCCCEEEEECHHHH-HHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCCCEEEECCEEECCCc
Confidence 6789999999999999999999999975 5999999999999999986665433 2 456778 9999999999999
Q ss_pred ccHHHHHHHHHHHhcCHHHHHHHHHhhccc
Q 019238 313 GTSMEFALAIVEKFFGRNKALELAKILLFT 342 (344)
Q Consensus 313 ~~~~~~~~~li~~l~g~~~a~~~a~~l~~~ 342 (344)
+ ++||++++|+++.|.+.++ ++.+.|-
T Consensus 157 ~-~~d~al~lv~~l~~~~~~~--~~~~~~~ 183 (188)
T 2fex_A 157 A-PVSFAVEILKSLGLFGPEA--EAELQIF 183 (188)
T ss_dssp C-HHHHHHHHHHHTTCCSHHH--HHHHGGG
T ss_pred c-HHHHHHHHHHHccCCCHHH--HHHHHHH
Confidence 6 8999999999999999887 7666553
No 20
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=1.6e-34 Score=266.55 Aligned_cols=178 Identities=29% Similarity=0.410 Sum_probs=162.6
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCce-eeeccce-eeeeccccccccCCCccEEEEcCCccchH
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLE-ILASCQV-KLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~-v~~~~g~-~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+++||+|+++|||.+.|+..++++|+.+|++++++|++++ + +.+++|+ .+.++..++++++.+||+|+||||.+ ..
T Consensus 9 ~mkkV~ILl~dgf~~~El~~p~dvL~~Ag~~v~vvS~~~g-~~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~g-~~ 86 (365)
T 3fse_A 9 GKKKVAILIEQAVEDTEFIIPCNGLKQAGFEVVVLGSRMN-EKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGMA-PD 86 (365)
T ss_dssp --CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSS-CCEECTTSCCEECCSEETTTCCGGGCSEEEECCBTH-HH
T ss_pred CceEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEECCCC-ceeecCCCceEEeCCCCHhhCCCcCCCEEEEECCcc-hh
Confidence 4689999999999999999999999999999999999997 6 9999999 99999999998767899999999974 55
Q ss_pred hhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcCCCcEEEeCCeEeCCCccc
Q 019238 237 AFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEIENRVVVDGNLVTSRGPGT 314 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~~~~~v~dg~liT~~g~~~ 314 (344)
.+..++.+++||+++++++++|+++|+|+ ++|+++|||+||++|+||...+.|++ ..+.+..+|+|||+|||+|+.+
T Consensus 87 ~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~-~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~~vV~DGniITs~G~~a 165 (365)
T 3fse_A 87 KMRRNPNTVRFVQEAMEQGKLVAAVCHGP-QVLIEGDLLRGKQATGFIAISKDMMNAGADYLDEALVVDGNLITSREPGD 165 (365)
T ss_dssp HHTTCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGG
T ss_pred hccCCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecCcEEEECCEEECCCHHH
Confidence 67789999999999999999999999997 55999999999999999999999875 4567888999999999999999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHhh
Q 019238 315 SMEFALAIVEKFFGRNKALELAKIL 339 (344)
Q Consensus 315 ~~~~~~~li~~l~g~~~a~~~a~~l 339 (344)
+++|+++||+++.|.+.+.++++..
T Consensus 166 ~~d~al~lIe~L~g~~~A~~lA~~~ 190 (365)
T 3fse_A 166 LAIFTTAILSRLGYGGKDAALPDEK 190 (365)
T ss_dssp HHHHHHHHHHHTTCCCSSSCCCCTT
T ss_pred HHHHHHHHHHHhcCchHHHHHhhhh
Confidence 9999999999999998888777554
No 21
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.1e-32 Score=231.79 Aligned_cols=161 Identities=22% Similarity=0.327 Sum_probs=144.0
Q ss_pred CCCeEEEEeCC---C---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccc--cCCCccEEEEcC
Q 019238 159 NSPQILVPIAN---G---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEA--AKLSYDLIVLPG 230 (344)
Q Consensus 159 ~~~~v~ill~~---g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~--~~~~~D~liipG 230 (344)
|++||+|+++| | |++.|+.. +.+++++++|++++.++.+++|+.+.++..+++. ++.+||+|+|||
T Consensus 1 m~~~v~ill~~~~~g~~~~~~~e~~~------~~~~~v~~vs~~~~~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpG 74 (175)
T 3cne_A 1 MAKKVAVLAVNPVNGCGLFQYLEAFF------ENGISYKVFAVSDTKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSC 74 (175)
T ss_dssp -CCEEEEEECSSBCHHHHHHHHHHHH------HTTCEEEEEESSSSSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEEC
T ss_pred CCcEEEEEEecCcCCCccchhhheee------eCCCEEEEEECCCCCceecCCCeEEEeccCHHHhccCcccCCEEEECC
Confidence 35899999999 9 88877776 6799999999985349999999999999999987 678899999999
Q ss_pred C--ccchHhhh---cCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhccCCcCCCcEEEeCC
Q 019238 231 G--LGGAQAFA---KSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSNQSEIENRVVVDGN 305 (344)
Q Consensus 231 G--~~~~~~l~---~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~v~dg~ 305 (344)
| ......+. .++.+++||+++++++|+|+++|+|+. +|+++|||+||++|+||...+.|++..+.++.+|+|||
T Consensus 75 G~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~-~La~aGlL~G~~~T~~~~~~~~l~~~~~~~~~~v~Dg~ 153 (175)
T 3cne_A 75 GDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAM-MFDFTGITKGKKVAVHPLAKPAIQNGIATDEKSEIDGN 153 (175)
T ss_dssp CTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHH-HHHHTTTTTTCEEECCGGGGGGCCSSEEESSSEEEETT
T ss_pred CcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHH-HHHHCCCcCCCEEEeCccHHHHhhcCEEeCCCEEEeCC
Confidence 9 63344445 788999999999999999999999975 59999999999999999999999887778899999999
Q ss_pred eEeCCCcccHHHHHHHHHHHh
Q 019238 306 LVTSRGPGTSMEFALAIVEKF 326 (344)
Q Consensus 306 liT~~g~~~~~~~~~~li~~l 326 (344)
+|||+|+.+++||++++|+++
T Consensus 154 iiTs~g~~~~~d~al~li~~l 174 (175)
T 3cne_A 154 FFTAQDENTIWTMLPKVIEAL 174 (175)
T ss_dssp EEEESSGGGGGGTHHHHHHHH
T ss_pred EEeCCChHHHHHHHHHHHHHh
Confidence 999999999999999999986
No 22
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.98 E-value=3.8e-32 Score=237.54 Aligned_cols=170 Identities=25% Similarity=0.339 Sum_probs=147.8
Q ss_pred CCCeEEEEeC----------CCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeecc--------c-----eeeeecccc
Q 019238 159 NSPQILVPIA----------NGSEEMEAVIIIDILRRAKANVVVASVADKLEILASC--------Q-----VKLVADMLI 215 (344)
Q Consensus 159 ~~~~v~ill~----------~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~--------g-----~~v~~~~~~ 215 (344)
|++||+|+++ +||++.|+..++++|+++|++++++|++++ ++.+.. | ..+.++..+
T Consensus 4 m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~-~v~~~~~~~~~~~~~~~~~~~~i~~~~~l 82 (224)
T 1u9c_A 4 MSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGG-EVPLDPRSINEKDPSWAEAEAALKHTARL 82 (224)
T ss_dssp CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCB-CCCBCGGGSSSCCGGGHHHHHHTTSBEEC
T ss_pred CCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCC-ccccCccccccHHHHHhhhhHhhcCCCCh
Confidence 3479999999 999999999999999999999999999986 666542 3 678889899
Q ss_pred ccccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcC------CCCCCeeeeCcCchhh
Q 019238 216 DEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHG------LLKGKKATAFPAMCNK 289 (344)
Q Consensus 216 ~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aG------lL~g~~~T~~~~~~~~ 289 (344)
+++.+.+||+|+||||......+..++.+++||+++++++|+|++||+|+. +|+++| ||+||++|+||...+.
T Consensus 83 ~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~-~La~ag~~~g~~lL~Gr~~T~~~~~~~~ 161 (224)
T 1u9c_A 83 SKDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPS-GLVNATYKDGTPIVKGKTVTSFTDEEER 161 (224)
T ss_dssp CGGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTSCBTTTTCEECCSCHHHHH
T ss_pred HHcChhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHH-HHHHccccCCCceecCcEEecCCCHHHh
Confidence 988777999999999976545678899999999999999999999999975 599999 9999999999987654
Q ss_pred ---------------hcc--CCcCCC-----cEEEeCCeEeCCCcccHHHHHHHHHHHhcCHH
Q 019238 290 ---------------LSN--QSEIEN-----RVVVDGNLVTSRGPGTSMEFALAIVEKFFGRN 330 (344)
Q Consensus 290 ---------------~~~--~~~~~~-----~~v~dg~liT~~g~~~~~~~~~~li~~l~g~~ 330 (344)
|++ ..+.+. .+|+|||+|||+|+.++++|+++||+++.|++
T Consensus 162 ~~~~~~~~p~~~~~~l~~~g~~~~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~~ 224 (224)
T 1u9c_A 162 EVGLDVHMPFLLESTLRLRGANFVRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEERE 224 (224)
T ss_dssp HHTCGGGSSSCHHHHHHHTTCEECCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTTC
T ss_pred hccccccCCccHHHHHHHcCCEEecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhccC
Confidence 332 334444 49999999999999999999999999999863
No 23
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.97 E-value=2.7e-30 Score=227.30 Aligned_cols=171 Identities=19% Similarity=0.287 Sum_probs=143.4
Q ss_pred CCeEEEEeC------------CCcchhHHHHHHHHHHhcCCeEEEEEeCCCceee---------------------eccc
Q 019238 160 SPQILVPIA------------NGSEEMEAVIIIDILRRAKANVVVASVADKLEIL---------------------ASCQ 206 (344)
Q Consensus 160 ~~~v~ill~------------~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~---------------------~~~g 206 (344)
|+||+|++. +||+..|+..++++|+++|++++++|++++.++. ++.+
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 82 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFN 82 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSCCCBCTTC--------------------CH
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcCCccccccccCHHHHHHHHHhhHHHH
Confidence 578888887 4899999999999999999999999998863231 1234
Q ss_pred eeeeeccccccccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc-------CCCCCCe
Q 019238 207 VKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH-------GLLKGKK 279 (344)
Q Consensus 207 ~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a-------GlL~g~~ 279 (344)
..+.++.+++++++.+||+|+||||++....+..++.+.+||+++++++|+|++||+|+++ |+++ |||+||+
T Consensus 83 ~~l~~~~~l~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~-La~a~~~~~g~gll~G~~ 161 (244)
T 3kkl_A 83 KALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLL-FDGLIDIKTTRPLIEGKA 161 (244)
T ss_dssp HHHHTCEEGGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGG-GTTCBCTTTSSBTTTTCE
T ss_pred HHhcCCCChHHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHH-HHHhhccccCCceeCCce
Confidence 5677888899998889999999999865577889999999999999999999999999865 9988 9999999
Q ss_pred eeeCcCchhh-------------------hcc--CCcCC------CcEEEeCCeEeCCCcccHHHHHHHHHHHhcCHHH
Q 019238 280 ATAFPAMCNK-------------------LSN--QSEIE------NRVVVDGNLVTSRGPGTSMEFALAIVEKFFGRNK 331 (344)
Q Consensus 280 ~T~~~~~~~~-------------------~~~--~~~~~------~~~v~dg~liT~~g~~~~~~~~~~li~~l~g~~~ 331 (344)
+|+||...+. +++ +.+.+ ..+|+||||||++|+.++.+|+++||+.+.+-+.
T Consensus 162 ~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~~~ 240 (244)
T 3kkl_A 162 ITGFPLEGEIALGVDDILRSRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSVEH 240 (244)
T ss_dssp ECCSCHHHHHHHTTHHHHHHTTCCCHHHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC---
T ss_pred ecCCCcHHHHhhhhhhhccccccccHHHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhhhh
Confidence 9999987543 222 33443 6899999999999999999999999999987653
No 24
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.97 E-value=1.9e-30 Score=229.22 Aligned_cols=167 Identities=19% Similarity=0.293 Sum_probs=144.2
Q ss_pred CCeEEEEeC------------CCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeee----------------------cc
Q 019238 160 SPQILVPIA------------NGSEEMEAVIIIDILRRAKANVVVASVADKLEILA----------------------SC 205 (344)
Q Consensus 160 ~~~v~ill~------------~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~----------------------~~ 205 (344)
|+||+|++. +|++..|+..++++|+++|++++++|++++ ++.. +.
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~-~~~d~~s~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGK-FGWDEHSLAKDFLNGQDETDFKNKDSDF 81 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSC-CCBCGGGGSTTTSCHHHHHHHHCTTSHH
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCC-CCcCcccccccccChHHHHHHHhhhHHH
Confidence 479999997 689999999999999999999999999986 4321 23
Q ss_pred ceeeeeccccccccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcC-------CCCCC
Q 019238 206 QVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHG-------LLKGK 278 (344)
Q Consensus 206 g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aG-------lL~g~ 278 (344)
|..+.++..++++++.+||+|+||||++....+..++.+++||+++++++|+|++||+|+. +|+++| ||+||
T Consensus 82 g~~l~~~~~l~~v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~-~La~ag~~~~g~~lL~G~ 160 (243)
T 1rw7_A 82 NKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPA-IFDGLTDKKTGRPLIEGK 160 (243)
T ss_dssp HHHHHTCBCGGGCCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGG-GGTTCBCTTTSSBTTTTC
T ss_pred HhhhccCCChHHCCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHH-HHHhcCcccCCceeeCCc
Confidence 6678888889988778899999999986566678899999999999999999999999985 599999 99999
Q ss_pred eeeeCcCchhh-------------------hc--cCCcC------CCcEEEeCCeEeCCCcccHHHHHHHHHHHhcC
Q 019238 279 KATAFPAMCNK-------------------LS--NQSEI------ENRVVVDGNLVTSRGPGTSMEFALAIVEKFFG 328 (344)
Q Consensus 279 ~~T~~~~~~~~-------------------~~--~~~~~------~~~~v~dg~liT~~g~~~~~~~~~~li~~l~g 328 (344)
++|+||...+. ++ +..+. ++.+|+|||+|||+|+.++++|+++||+++..
T Consensus 161 ~~T~~~~~~e~~~~~~~~~p~~~~~~l~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~ 237 (243)
T 1rw7_A 161 SITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 (243)
T ss_dssp EECCSCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC-
T ss_pred EEeecCCHHHhhccccccccccccccHHHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhh
Confidence 99999987665 22 23344 78899999999999999999999999998854
No 25
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.97 E-value=4.4e-30 Score=232.10 Aligned_cols=171 Identities=21% Similarity=0.284 Sum_probs=147.3
Q ss_pred CCeEEEEeCC--------------CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeee--------------cc---cee
Q 019238 160 SPQILVPIAN--------------GSEEMEAVIIIDILRRAKANVVVASVADKLEILA--------------SC---QVK 208 (344)
Q Consensus 160 ~~~v~ill~~--------------g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~--------------~~---g~~ 208 (344)
.+||+|++.+ ||++.|+..++++|+++|++++++|++++ ++.. .. |..
T Consensus 48 ~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g~-~v~~d~~s~~~~~~~~~~~~~~~g~~ 126 (291)
T 1n57_A 48 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGL-MTKFEYWAMPHKDEKVMPFFEQHKSL 126 (291)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSC-CCCBCGGGCCTTCTTHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCC-cccccccccccccHHHHHHHHhccce
Confidence 4799999985 79999999999999999999999999986 6652 22 778
Q ss_pred eeeccccccc-----cCCCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc----CCCCCCe
Q 019238 209 LVADMLIDEA-----AKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH----GLLKGKK 279 (344)
Q Consensus 209 v~~~~~~~~~-----~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a----GlL~g~~ 279 (344)
+.++..++++ ++.+||+||||||++....+..++.+++||+++++++|+|++||+|+++ |+++ |||+||+
T Consensus 127 l~~~~~l~~v~~~~~~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~-La~a~~~~GLL~Gr~ 205 (291)
T 1n57_A 127 FRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAA-FLALRHGDNPLNGYS 205 (291)
T ss_dssp HHSCEEHHHHHHTCCTTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGG-GGGGTTSCCTTTTCE
T ss_pred ecCCccHHHHhhhccCcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHH-HHhhcccCccCCCCE
Confidence 8888888884 4689999999999765446788999999999999999999999999865 6666 5999999
Q ss_pred eeeCcCchhhhcc---------------------CCcC----CCcEEEeCCeEeCCCcccHHHHHHHHHHHhcCHHHH
Q 019238 280 ATAFPAMCNKLSN---------------------QSEI----ENRVVVDGNLVTSRGPGTSMEFALAIVEKFFGRNKA 332 (344)
Q Consensus 280 ~T~~~~~~~~~~~---------------------~~~~----~~~~v~dg~liT~~g~~~~~~~~~~li~~l~g~~~a 332 (344)
+|+||...+.+.+ ..+. +..+|+|||+|||+|+.++++|+++||+++.|++..
T Consensus 206 ~Tt~~~~~e~~~~~~~~~~~~~P~~le~~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~~~ 283 (291)
T 1n57_A 206 ICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYAG 283 (291)
T ss_dssp ECCCCGGGGGTTTTTTSSSSCCSSCHHHHHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHHCC
T ss_pred EEeCCCHHHhhhccccccccccchhHHHHHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCchhh
Confidence 9999998877632 2344 788999999999999999999999999999987643
No 26
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.97 E-value=8.4e-30 Score=224.29 Aligned_cols=169 Identities=24% Similarity=0.292 Sum_probs=141.9
Q ss_pred CCeEEEEeCC------------CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeec---------------------cc
Q 019238 160 SPQILVPIAN------------GSEEMEAVIIIDILRRAKANVVVASVADKLEILAS---------------------CQ 206 (344)
Q Consensus 160 ~~~v~ill~~------------g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~---------------------~g 206 (344)
|+||+|++.+ ||+..|+..++++|+++|++++++|++++.++... .+
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 88 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGTFGWDEHSLTQEYLSKEDEKVLHSEHNHFM 88 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSSCCCBCSGGGSGGGCCHHHHHHHTCSSCHHH
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCCCcccCcccccccccCHHHHHHHHhhhHHHH
Confidence 6899999986 88999999999999999999999999886323111 12
Q ss_pred eeeee-ccccccccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc------CCCCCCe
Q 019238 207 VKLVA-DMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH------GLLKGKK 279 (344)
Q Consensus 207 ~~v~~-~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a------GlL~g~~ 279 (344)
..+.. +..++++++.+||+|+||||++....+..++.+.+||+++++++|+|++||+|+++ |+++ |||+||+
T Consensus 89 ~~l~~~~~~l~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~-La~a~~~~g~gll~G~~ 167 (247)
T 3n7t_A 89 EKMNKQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAM-LPGIHDENGDSVIKDKT 167 (247)
T ss_dssp HHHHHCCEEGGGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGG-GGGCBCTTSSBTTTTCE
T ss_pred HHHhccCCCHHHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHH-HHHhhcccCCccccCce
Confidence 23555 77888888889999999999865467889999999999999999999999999865 9998 9999999
Q ss_pred eeeCcCchhh-------------------hcc--CCcCC------CcEEEeCCeEeCCCcccHHHHHHHHHHHhcCH
Q 019238 280 ATAFPAMCNK-------------------LSN--QSEIE------NRVVVDGNLVTSRGPGTSMEFALAIVEKFFGR 329 (344)
Q Consensus 280 ~T~~~~~~~~-------------------~~~--~~~~~------~~~v~dg~liT~~g~~~~~~~~~~li~~l~g~ 329 (344)
+|+||...+. +++ +.+.+ ..+|+||||||++|+.++.+|+++||+.+.+.
T Consensus 168 ~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~~ 244 (247)
T 3n7t_A 168 VTGFTTKGEIMIKVIDKMREDHLHTIADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEGI 244 (247)
T ss_dssp ECCCCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHhhhhhhhhccccchhhHHHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhhh
Confidence 9999987543 222 33443 58999999999999999999999999998654
No 27
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.96 E-value=2.1e-29 Score=238.34 Aligned_cols=170 Identities=24% Similarity=0.352 Sum_probs=151.5
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCc---------------eeeeccceeeeeccccccccCCCc
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKL---------------EILASCQVKLVADMLIDEAAKLSY 223 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~---------------~v~~~~g~~v~~~~~~~~~~~~~~ 223 (344)
+++||+|+++|||++.|+..+++.|+++|++++++|++++. .+.++.|..+.++..+++.++.+|
T Consensus 11 ~~~kv~ill~dg~e~~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 90 (396)
T 3uk7_A 11 NSRTVLILCGDYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSKY 90 (396)
T ss_dssp CCCEEEEECCTTEEHHHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGGC
T ss_pred cCCeEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCcccC
Confidence 46899999999999999999999999999999999998641 245677999999999999877899
Q ss_pred cEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeeeCcCchhhhcc--CCcC----C
Q 019238 224 DLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSN--QSEI----E 297 (344)
Q Consensus 224 D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~--~~~~----~ 297 (344)
|+|+||||.+ ...+..++.+++||+++++++|+|+++|+|+. +|+++|||+||++|+||...+.|++ ..+. .
T Consensus 91 D~livpGG~~-~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~-~La~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~ 168 (396)
T 3uk7_A 91 DGLVIPGGRA-PEYLALTASVVELVKEFSRSGKPIASICHGQL-ILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITP 168 (396)
T ss_dssp SEEEECCBSH-HHHHTTCHHHHHHHHHHHHTTCCEEEETTTHH-HHHHTTCCTTCEECCCGGGHHHHHHTTCEECCCSST
T ss_pred CEEEECCCcc-hhhcccCHHHHHHHHHHHHcCCEEEEECchHH-HHHhccccCCCEeecCcchHHHHHHCCCEEECCCCC
Confidence 9999999964 55577899999999999999999999999975 5999999999999999999998875 2232 2
Q ss_pred CcEEEeCCeEeCCCcccHHHHHHHHHHHhcCHH
Q 019238 298 NRVVVDGNLVTSRGPGTSMEFALAIVEKFFGRN 330 (344)
Q Consensus 298 ~~~v~dg~liT~~g~~~~~~~~~~li~~l~g~~ 330 (344)
..+|+|||+|||+|+.++++|+++||+++.|++
T Consensus 169 ~~~v~Dg~iiT~~g~~~~~d~al~li~~l~g~~ 201 (396)
T 3uk7_A 169 DVCVVDGSLITAATYEGHPEFIQLFVKALGGKI 201 (396)
T ss_dssp TCEEEETTEEEESSGGGHHHHHHHHHHHTTCEE
T ss_pred cceEecCCEEEecCcccHHHHHHHHHHHHhccc
Confidence 358999999999999999999999999999975
No 28
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.96 E-value=2.7e-29 Score=220.41 Aligned_cols=172 Identities=23% Similarity=0.368 Sum_probs=140.4
Q ss_pred CCCeEEEEeC-----CCcchhHHHHHHHHHHhcCCeEEEEEeCCCce--e---------eeccceeeeec-------ccc
Q 019238 159 NSPQILVPIA-----NGSEEMEAVIIIDILRRAKANVVVASVADKLE--I---------LASCQVKLVAD-------MLI 215 (344)
Q Consensus 159 ~~~~v~ill~-----~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~--v---------~~~~g~~v~~~-------~~~ 215 (344)
.|+||+|+++ |||++.|+..++++|+++|++++++|++++ + + .++.|+.+.++ ..+
T Consensus 5 ~m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~-~~~v~d~~s~~~~~~~~g~~i~~~~~~~~~~~~l 83 (232)
T 1vhq_A 5 TMKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ-QVDVINHLTGEAMTETRNVLIEAARITRGEIRPL 83 (232)
T ss_dssp -CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSB-CSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEG
T ss_pred cCCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCC-CCcccccccccchhhhhhhhHHHHHhhhcCCCCH
Confidence 4689999999 999999999999999999999999999886 4 3 66788888887 778
Q ss_pred ccccCCCccEEEEcCCccchHhh----------hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCC-CCeeeeC-
Q 019238 216 DEAAKLSYDLIVLPGGLGGAQAF----------AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK-GKKATAF- 283 (344)
Q Consensus 216 ~~~~~~~~D~liipGG~~~~~~l----------~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~-g~~~T~~- 283 (344)
+++++.+||+|+||||++....+ ..++.+++||+++++++|+|++||+|+++ |+++ |+ ||++|+|
T Consensus 84 ~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~-La~a--L~~Gr~~Tth~ 160 (232)
T 1vhq_A 84 AQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAM-LPKI--FDFPLRLTIGT 160 (232)
T ss_dssp GGCCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGG-HHHH--CSSCCEECCCS
T ss_pred HHcCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHH-HHHH--hcCCCEEeccC
Confidence 88766789999999997542212 24899999999999999999999999855 9988 79 9999999
Q ss_pred c-Cchhhhcc--CCcCC---CcEEE--eCCeEeCCCcccHHHHHHHHHHHhcCHHH-HHHHHHh
Q 019238 284 P-AMCNKLSN--QSEIE---NRVVV--DGNLVTSRGPGTSMEFALAIVEKFFGRNK-ALELAKI 338 (344)
Q Consensus 284 ~-~~~~~~~~--~~~~~---~~~v~--dg~liT~~g~~~~~~~~~~li~~l~g~~~-a~~~a~~ 338 (344)
| ...+.|++ ..+.+ ..+++ |||+|||+ +++|+++||+++.|.+. ++++.++
T Consensus 161 ~~~~~~~l~~~g~~~~~~~~~~~~vd~dg~liTs~----~~d~al~lv~~~~G~~~~~~~~~~~ 220 (232)
T 1vhq_A 161 DIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTP----AYMLAQNIAEAASGIDKLVSRVLVL 220 (232)
T ss_dssp CHHHHHHHHHTTCEECCCCTTCCEEETTTTEEEEC----GGGTCSSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCEEecCCCCceEEecCCCEEECC----CHHHHHHHHHHHcCHHHHHHHHHHh
Confidence 5 66777876 33433 24444 49999997 78899999999999974 4444433
No 29
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.95 E-value=3.5e-28 Score=213.30 Aligned_cols=166 Identities=19% Similarity=0.248 Sum_probs=132.6
Q ss_pred CCCeEEEEeC-----CCcchhHHHHHHHHHHhcCCeEEEEEeCCCc----------eeeeccceeeeec-------cccc
Q 019238 159 NSPQILVPIA-----NGSEEMEAVIIIDILRRAKANVVVASVADKL----------EILASCQVKLVAD-------MLID 216 (344)
Q Consensus 159 ~~~~v~ill~-----~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~----------~v~~~~g~~v~~~-------~~~~ 216 (344)
+++||+|++. |||++.|+..++++|+++|++++++|++++. ++.++.|+.+.++ ..++
T Consensus 22 M~kkV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~~~~g~~v~~s~g~~v~~d~~~~~~~~~l~ 101 (242)
T 3l3b_A 22 MALNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQVVDHKKKESVGEVRNILVESARIARGSVYDIE 101 (242)
T ss_dssp --CEEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSSBCSCEEETTTTEEESCCCBHHHHHHHHTTTCEEEGG
T ss_pred ccCEEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCcccccccccCccccccCCeEEecchhccccCCChH
Confidence 4589999998 9999999999999999999999999998752 4566778888887 6788
Q ss_pred cccCCCccEEEEcCCccchHh-----------hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcC-CCCCCeeeeCc
Q 019238 217 EAAKLSYDLIVLPGGLGGAQA-----------FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHG-LLKGKKATAFP 284 (344)
Q Consensus 217 ~~~~~~~D~liipGG~~~~~~-----------l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aG-lL~g~~~T~~~ 284 (344)
++++.+||+|+||||.+.... +..++.+++||+++++++|+|++||+|+++ |+++| ||+||++|+||
T Consensus 102 dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~-La~ag~lL~Gr~~T~~~ 180 (242)
T 3l3b_A 102 QIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAV-VVALLKDIAKVKVTIGE 180 (242)
T ss_dssp GCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHH-HHHHHTTTCCCEECCCC
T ss_pred HCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHH-HHHhCcccCCCEEEecC
Confidence 887789999999999754322 256799999999999999999999999855 99999 99999999999
Q ss_pred Cchhhhcc--CCcCC---CcEEEe--CCeEeCCCcccHHHHHHHHHHHhcCH
Q 019238 285 AMCNKLSN--QSEIE---NRVVVD--GNLVTSRGPGTSMEFALAIVEKFFGR 329 (344)
Q Consensus 285 ~~~~~~~~--~~~~~---~~~v~d--g~liT~~g~~~~~~~~~~li~~l~g~ 329 (344)
.....+++ +.+.+ +.+|+| ||+||++++.. +..|.+...|.
T Consensus 181 ~~~~~l~~~Ga~~~~~~~~~vVvD~~g~liTs~a~~~----~~~~~e~~~g~ 228 (242)
T 3l3b_A 181 DSNGLIDKMGGVHVDCPTIKSVKDDVNRIFSCSAYMR----NDSLYNVYLGI 228 (242)
T ss_dssp ----CHHHHTCEECCCCTTCCEEETTTTEEEECGGGS----CCCHHHHHHHH
T ss_pred ChHHHHHHCCCEEEcCCCCeEEEECCCCEEECcCccc----CCCHHHHHhCH
Confidence 88766664 44444 578889 99999998753 23444544444
No 30
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=99.95 E-value=1.6e-27 Score=202.86 Aligned_cols=138 Identities=35% Similarity=0.572 Sum_probs=127.2
Q ss_pred CeeehhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCcccccccc--C------CCchhhhcccCChHHHHHHHHHhh
Q 019238 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD--A------CGMPGATNLKESEVLESIVKKQAS 72 (344)
Q Consensus 1 ~E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~--~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (344)
+|+..|+++|+++||+++++|++++.+|++++|+.+.+|..+++++. + ||.++...+..++.+++||+++++
T Consensus 19 ~e~~~~~~~l~~ag~~v~~~s~~~~~~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~ 98 (190)
T 4e08_A 19 MEFIIAADVLRRAGIKVTVAGLNGGEAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQES 98 (190)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSSCEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCcceecCCCcEEECCCCHHHCCcccCCEEEECCCChHHHHhhhCHHHHHHHHHHHH
Confidence 37789999999999999999999646899999999999999998752 2 775566677889999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCEEcCCCCCcHHHHHHHHHHHHcChhH
Q 019238 73 DGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKGK 127 (344)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g~~~ 127 (344)
++++|++||+|+ ++|+++|||+||+ |||+|||+|+++++||++++|+++.|++.
T Consensus 99 ~~k~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiTs~g~~a~~d~al~li~~~~g~~~ 177 (190)
T 4e08_A 99 GGGLIAAICAAP-TVLAKHGVASGKSLTSYPSMKPQLVNNYSYVDDKTVVKDGNLITSRGPGTAYEFALKIAEELAGKEK 177 (190)
T ss_dssp TTCEEEEETTTH-HHHHHTTCSTTCEECCCGGGGGGSSSSSEECSSCSEEEETTEEEECSGGGHHHHHHHHHHHHHCHHH
T ss_pred CCCEEEEECHHH-HHHHHCCCcCCCeEEeCcCHHHHHhcCCcccCCCcEEEECCEEECCChHHHHHHHHHHHHHhcCHHH
Confidence 999999999999 5999999999998 89999999999999999999999999999
Q ss_pred HHHHhhcccccc
Q 019238 128 ADEVSGARVMRA 139 (344)
Q Consensus 128 a~~v~~~~~~~~ 139 (344)
|+++++.|++++
T Consensus 178 a~~va~~l~~~~ 189 (190)
T 4e08_A 178 VQEVAKGLLVAY 189 (190)
T ss_dssp HHHHHHHHTCCC
T ss_pred HHHHHHhhCccc
Confidence 999999999876
No 31
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=99.94 E-value=4.2e-27 Score=203.02 Aligned_cols=142 Identities=16% Similarity=0.148 Sum_probs=122.0
Q ss_pred CeeehhHHHHHhCC-------CeEEEEEecCCcceecCCCCEEEcCccccccccC------CCch-hhhcccCChHHHHH
Q 019238 1 MEAVITIDVLRRSG-------ADVVVASVEKQLRVDACHGVKIVADALVSNCRDA------CGMP-GATNLKESEVLESI 66 (344)
Q Consensus 1 ~E~~~~~~~l~~~~-------~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~------gG~~-~~~~~~~~~~~~~~ 66 (344)
+|+..|+|+|++++ |+|+++|+++ ++|++++|+++.+|..+++++++ ||.. ....+.+++.+++|
T Consensus 22 ~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~-~~v~~~~G~~v~~d~~~~~~~~~D~livpGg~~~~~~~~~~~~~l~~~ 100 (209)
T 3er6_A 22 ASIISSLEILETAAEFAEFQGFMTHVVTPNN-RPLIGRGGISVQPTAQWQSFDFTNILIIGSIGDPLESLDKIDPALFDW 100 (209)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEEEECTTS-SCEEETTTEEEECSSCGGGCSCCSEEEECCCSCHHHHGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeCCC-CceecCCCeEEeCCcCccccCCCCEEEECCCCCchhhhccCCHHHHHH
Confidence 36788999998764 9999999996 69999999999999999988654 6532 23334689999999
Q ss_pred HHHHhhCCCEEEEEchhHHHHHHHcCCCCCCC----------------------------CCCEEcCCCCCcHHHHHHHH
Q 019238 67 VKKQASDGRLYAAICVFLAVALGSWGLLKGLK----------------------------DGKVVTTRGPGTPMEFVVAL 118 (344)
Q Consensus 67 l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~----------------------------dg~~iT~~g~~~~~~~~~~l 118 (344)
|++++++|++|++||+|+ ++||++|||+||+ |||+|||+|+++++||++++
T Consensus 101 l~~~~~~g~~iaaIC~G~-~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G~~a~~dlal~l 179 (209)
T 3er6_A 101 IRELHLKGSKIVAIDTGI-FVVAKAGLLQQNKAVMHSYFAHLFGELFPEIMLMTEQKALIDGNVYLSSGPYSHSSVMLEI 179 (209)
T ss_dssp HHHHHHTTCEEEEETTHH-HHHHHHTCCSSCEECCCHHHHHHHHHHCTTSEECTTCSEEEETTEEEECCSSCCHHHHHHH
T ss_pred HHHHHhcCCEEEEEcHHH-HHHHHcCCCCCCeeEECHHHHHHHHHHCCCcEEecCCEEEEeCCEEECCcHHHHHHHHHHH
Confidence 999999999999999999 6999999999998 89999999999999999999
Q ss_pred HHHHcChhHHHHHhhcccccccCCCc
Q 019238 119 VEQLYGKGKADEVSGARVMRANHGDE 144 (344)
Q Consensus 119 v~~~~g~~~a~~v~~~~~~~~~~~~~ 144 (344)
|++++|++.|+++++.|+++++++-+
T Consensus 180 i~~~~G~~~A~~va~~l~~~~~~~~~ 205 (209)
T 3er6_A 180 VEEYFGKHTRNLGNQFLSTIESEGHH 205 (209)
T ss_dssp HHHHHCHHHHHHHHHHTTC-------
T ss_pred HHHHhCHHHHHHHHHHhccCcccccc
Confidence 99999999999999999998876543
No 32
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=99.94 E-value=1.3e-26 Score=202.83 Aligned_cols=137 Identities=23% Similarity=0.333 Sum_probs=126.9
Q ss_pred CeeehhHHHHHh-CCCeEEEEEecCCcceecCCCCEEEcCccccccccC------CCchhhhcccCChHHHHHHHHHhhC
Q 019238 1 MEAVITIDVLRR-SGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA------CGMPGATNLKESEVLESIVKKQASD 73 (344)
Q Consensus 1 ~E~~~~~~~l~~-~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~------gG~~~~~~~~~~~~~~~~l~~~~~~ 73 (344)
+|+..|+++|++ ++|+|+++|+++ .+|++++|+.+.+|..+++++++ || .+...+..++.+++||++++++
T Consensus 19 ~e~~~p~evl~~~~~~~v~~vs~~~-~~V~~~~G~~v~~d~~l~~~~~~D~livpGG-~g~~~~~~~~~l~~~lr~~~~~ 96 (231)
T 3noq_A 19 LDLTGPHDVLASLPDVQVHLIWKEP-GPVVASSGLVLQATTSFADCPPLDVICIPGG-TGVGALMEDPQALAFIRQQAAR 96 (231)
T ss_dssp HHHHHHHHHHTTSTTEEEEEEESSS-EEEECTTSCEEEECEETTTCCCCSEEEECCS-TTHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCEEEEEECCC-CcEEcCCCCEEecccChhHCCcCCEEEECCC-CChhhhccCHHHHHHHHHHHhc
Confidence 377899999998 799999999996 59999999999999999988655 66 4566678899999999999999
Q ss_pred CCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCEEcCCCCCcHHHHHHHHHHHHcChhHH
Q 019238 74 GRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKGKA 128 (344)
Q Consensus 74 g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g~~~a 128 (344)
+++|++||+|+ ++|+++|||+||+ |||+|||+|+++++||++++|++++|++.|
T Consensus 97 g~~v~aiC~G~-~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~~d~aL~li~~~~G~~~A 175 (231)
T 3noq_A 97 ARYVTSVSTGS-LVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHERVVRDGNLLTGGGITAGIDFALTLAAELFDAATA 175 (231)
T ss_dssp CSEEEEETTHH-HHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCSSEEEETTEEEECSTTHHHHHHHHHHHHHSCHHHH
T ss_pred CCEEEEECHHH-HHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCCcEEEeCCEEECCCHHHHHHHHHHHHHHHcCHHHH
Confidence 99999999999 6999999999998 899999999999999999999999999999
Q ss_pred HHHhhccccccc
Q 019238 129 DEVSGARVMRAN 140 (344)
Q Consensus 129 ~~v~~~~~~~~~ 140 (344)
+++++.|+|+++
T Consensus 176 ~~va~~l~~~~~ 187 (231)
T 3noq_A 176 QRVQLQLEYAPA 187 (231)
T ss_dssp HHHHHHTTCCCC
T ss_pred HHHHHhceeCCC
Confidence 999999999875
No 33
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=99.94 E-value=5.2e-27 Score=202.37 Aligned_cols=142 Identities=30% Similarity=0.494 Sum_probs=127.9
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccc--cC------CCchhhhcccCChHHHHHHHHHhhC
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCR--DA------CGMPGATNLKESEVLESIVKKQASD 73 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~~~l~~~~~~ 73 (344)
|+..|+++|+++||+++++|+++..+|++++|+.+.+|..+++++ ++ ||.++...+..++.+++||++++++
T Consensus 24 e~~~~~~~l~~ag~~v~~vs~~g~~~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~ 103 (208)
T 3ot1_A 24 ETVIIVDTLVRAGFQVTMAAVGDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQQ 103 (208)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSSCSEEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEEEcCCCcceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHHHHHhhCHHHHHHHHHHHHc
Confidence 778999999999999999999853599999999999999999884 33 7765667778899999999999999
Q ss_pred CCEEEEEchhH-HHHHHHcCCCCCCC-----------------------C--CCEEcCCCCCcHHHHHHHHHHHHcChhH
Q 019238 74 GRLYAAICVFL-AVALGSWGLLKGLK-----------------------D--GKVVTTRGPGTPMEFVVALVEQLYGKGK 127 (344)
Q Consensus 74 g~~i~aiC~g~-~~~La~aGll~g~~-----------------------d--g~~iT~~g~~~~~~~~~~lv~~~~g~~~ 127 (344)
+++|++||+|+ + +|+++|||+||+ | ||+|||+|+++++||++++|+++.|++.
T Consensus 104 gk~i~aiC~G~a~-~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~vv~d~dg~iiTs~g~~a~~d~al~lv~~l~G~~~ 182 (208)
T 3ot1_A 104 GKLVAAICATPAL-VFAKQQKFVGARMTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGTALEFALAMIALLAGVEL 182 (208)
T ss_dssp TCEEEEETTHHHH-TTTTTTCSTTCCBCCCGGGGGGSCTTTBCCSSEEEEGGGTEEEECSGGGHHHHHHHHHHHHHCHHH
T ss_pred CCEEEEEChhHHH-HHHHCCccCCCEEEECccHHHHccCCccccCcEEEeCCCCEEECCCHHHHHHHHHHHHHHhcCHHH
Confidence 99999999998 7 999999999998 4 4999999999999999999999999999
Q ss_pred HHHHhhcccccccCCCc
Q 019238 128 ADEVSGARVMRANHGDE 144 (344)
Q Consensus 128 a~~v~~~~~~~~~~~~~ 144 (344)
|+++++.|+|++..+.+
T Consensus 183 a~~va~~l~~~~~~~~q 199 (208)
T 3ot1_A 183 AQHVAAPMVLHPQQLTE 199 (208)
T ss_dssp HHHHHGGGTCCHHHHHH
T ss_pred HHHHHHhheeCCCCCCc
Confidence 99999999996544333
No 34
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=99.94 E-value=1.8e-26 Score=204.09 Aligned_cols=139 Identities=20% Similarity=0.279 Sum_probs=126.7
Q ss_pred CeeehhHHHH-HhCCCeEEEEEecCCcceecCCCCEEEcCcccccccc-C------CCchhhhcccCChHHHHHHHHHhh
Q 019238 1 MEAVITIDVL-RRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD-A------CGMPGATNLKESEVLESIVKKQAS 72 (344)
Q Consensus 1 ~E~~~~~~~l-~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~-~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (344)
+|+..|+++| ++++|+|+++|+++ .+|++++|+.+.+|..+++++. + ||.++...+..++.+++||+++++
T Consensus 37 ~e~~~p~dvl~~~~~~~v~~vs~~~-~~V~~~~G~~i~~d~~l~~~~~~yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~ 115 (253)
T 3ewn_A 37 MDLVGPHCMFGSLMGAKIYIVAKSL-DPVTSDAGLAIVPTATFGTCPRDLTVLFAPGGTDGTLAAASDAETLAFMADRGA 115 (253)
T ss_dssp HHHHHHHHHHTTSTTCEEEEEESSS-SCEECTTSCEECCSEETTTSCSSCSEEEECCBSHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCEEEEEeCCC-CeEEcCCCCEEeCCcCHHHcCCCCCEEEECCCccchhhhccCHHHHHHHHHHHH
Confidence 3778999999 67899999999996 5899999999999999988753 2 775356677889999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCEEcCCCCCcHHHHHHHHHHHHcChhH
Q 019238 73 DGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKGK 127 (344)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g~~~ 127 (344)
++++|++||+|+ ++|+++|||+||+ |||+|||+|+++++||+++||+++.|++.
T Consensus 116 ~gk~IaaICtG~-~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~iiTs~G~~a~idlaL~lv~~l~G~~~ 194 (253)
T 3ewn_A 116 RAKYITSVCSGS-LILGAAGLLKGYKATSHWSCRDALAGFGAIPTEARVVRDRNRITGAGVTAGLDFGLSMVAELRDQTY 194 (253)
T ss_dssp TCSEEEEETTHH-HHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCSSEEEETTEEEECSTTHHHHHHHHHHHHHSCHHH
T ss_pred cCCEEEEEChHH-HHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCCcEEEECCEEECCCHHHHHHHHHHHHHHHcCHHH
Confidence 999999999999 6999999999998 89999999999999999999999999999
Q ss_pred HHHHhhcccccccC
Q 019238 128 ADEVSGARVMRANH 141 (344)
Q Consensus 128 a~~v~~~~~~~~~~ 141 (344)
|+++++.|+|++++
T Consensus 195 A~~va~~l~~~~~~ 208 (253)
T 3ewn_A 195 AECAQLMSEYDPDP 208 (253)
T ss_dssp HHHHHHHTTCCCCC
T ss_pred HHHHHHhcccCCCC
Confidence 99999999998744
No 35
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=99.94 E-value=1.7e-26 Score=197.57 Aligned_cols=137 Identities=39% Similarity=0.536 Sum_probs=124.6
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCcccccc---ccC------CCchhhhcccCChHHHHHHHHHhh
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNC---RDA------CGMPGATNLKESEVLESIVKKQAS 72 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~---~~~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (344)
|+..|+++|+++||+++++|++++.++++++|+.+.+|..++++ .++ ||.++...+..++.+++||+++++
T Consensus 18 e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~~~l~~~~~~~~~l~~~~~ 97 (197)
T 2rk3_A 18 ETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEN 97 (197)
T ss_dssp HHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEcCCCCccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhHHHhhhCHHHHHHHHHHHH
Confidence 67899999999999999999997568999999999999999887 333 775456667789999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC--------------------------CCCEEcCCCCCcHHHHHHHHHHHHcChh
Q 019238 73 DGRLYAAICVFLAVALGSWGLLKGLK--------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKG 126 (344)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~--------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g~~ 126 (344)
++++|++||+|+ ++|+++|||+||+ |||+|||+|+++++||++++|+++.|++
T Consensus 98 ~gk~i~aiC~G~-~~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~~~v~Dg~iiTs~g~~a~~d~al~li~~l~g~~ 176 (197)
T 2rk3_A 98 RKGLIATICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKE 176 (197)
T ss_dssp TTCEEEEETTTH-HHHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCCSEEEETTEEEECSGGGHHHHHHHHHHHHHCHH
T ss_pred cCCEEEEECHHH-HHHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCCCEEEeCCEEECCCHHHHHHHHHHHHHHhcCHH
Confidence 999999999999 5999999999988 8999999999999999999999999999
Q ss_pred HHHHHhhcccccc
Q 019238 127 KADEVSGARVMRA 139 (344)
Q Consensus 127 ~a~~v~~~~~~~~ 139 (344)
.|+++++.|++++
T Consensus 177 ~a~~va~~~~~~~ 189 (197)
T 2rk3_A 177 VAAQVKAPLVLKD 189 (197)
T ss_dssp HHHHHHGGGTC--
T ss_pred HHHHHHHHHhhhh
Confidence 9999999999876
No 36
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=99.94 E-value=9.6e-27 Score=200.97 Aligned_cols=138 Identities=17% Similarity=0.291 Sum_probs=126.1
Q ss_pred CeeehhHHHHHhC--CCeEEEEEecCCcceecCCCCEEEcCccccccccC------CCchhhhcccCChHHHHHHHHHhh
Q 019238 1 MEAVITIDVLRRS--GADVVVASVEKQLRVDACHGVKIVADALVSNCRDA------CGMPGATNLKESEVLESIVKKQAS 72 (344)
Q Consensus 1 ~E~~~~~~~l~~~--~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (344)
+|+..|+++|+++ +|+|+++|+++ .+|++++|+.+.+|..+++++.+ || .+...+..++.+++||+++++
T Consensus 18 ~e~~~~~~~l~~a~~~~~v~~vs~~~-~~V~~~~G~~v~~d~~~~~~~~~D~livpGG-~~~~~~~~~~~~~~~l~~~~~ 95 (211)
T 3mgk_A 18 LDVFGPVEIFGNLQDDFELNFISSDG-GLVESSQKVRVETSLYTRDENIEKILFVPGG-SGTREKVNDDNFINFIGNMVK 95 (211)
T ss_dssp HHHHHHHHHHTTCTTTEEEEEECSSC-EEEECTTCCEEEEBCCCCCSSSEEEEEECCS-THHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCceEEEEEECCC-CeEecCCCcEEEeccchhhCCCCCEEEECCC-cchhhhcCCHHHHHHHHHHHH
Confidence 3778999999988 59999999996 59999999999999999887643 66 455667789999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC----------------------------CCCEEcCCCCCcHHHHHHHHHHHHcC
Q 019238 73 DGRLYAAICVFLAVALGSWGLLKGLK----------------------------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (344)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~----------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g 124 (344)
++++|++||+|+ ++|+++|||+||+ |||+|||+|+++++||++++|+++.|
T Consensus 96 ~~k~iaaiC~G~-~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~~~v~Dg~iiTs~G~~a~~dlal~lv~~~~G 174 (211)
T 3mgk_A 96 ESKYIISVCTGS-ALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEARWVKDGNIYTSSGVSAGIDMTLGFIEDLIG 174 (211)
T ss_dssp HCSEEEECTTHH-HHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSCSEEEETTEEEECSHHHHHHHHHHHHHHHHC
T ss_pred cCCEEEEEchHH-HHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCCeEEEeCCEEECCCHHHHHHHHHHHHHHHhC
Confidence 999999999999 5999999999998 89999999999999999999999999
Q ss_pred hhHHHHHhhcccccccC
Q 019238 125 KGKADEVSGARVMRANH 141 (344)
Q Consensus 125 ~~~a~~v~~~~~~~~~~ 141 (344)
++.|+++++.|+|++++
T Consensus 175 ~~~A~~va~~l~~~~~r 191 (211)
T 3mgk_A 175 KEKALEISRSIEYFWNE 191 (211)
T ss_dssp HHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHhcEECCcC
Confidence 99999999999998643
No 37
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=99.93 E-value=5.5e-26 Score=190.16 Aligned_cols=121 Identities=21% Similarity=0.221 Sum_probs=111.9
Q ss_pred CeeehhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCcccccccc--C------CCchhhhcccCChHHHHHHHHHhh
Q 019238 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD--A------CGMPGATNLKESEVLESIVKKQAS 72 (344)
Q Consensus 1 ~E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~--~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (344)
+|++.|+++|+++|++++++|+++ +++++++|+++.+|..+++++. + || .+...+++|+.+++||+++++
T Consensus 22 ~E~~~p~~~l~~ag~~V~~~s~~~-~~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG-~g~~~l~~~~~~~~~l~~~~~ 99 (177)
T 4hcj_A 22 EEYFESKKIFESAGYKTKVSSTFI-GTAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGG-IGCITLWDDWRTQGLAKLFLD 99 (177)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSS-EEEEETTSCEEEECEEGGGCCGGGCSEEEECCS-GGGGGGTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCC-CeEeeCCCCEEecCccHHHCCHhHCCEEEECCC-ccHHHHhhCHHHHHHHHHHHH
Confidence 388999999999999999999996 6999999999999999998752 3 77 466788999999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCEEcCCCCCcHHHHHHHHHHHHcC
Q 019238 73 DGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (344)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g 124 (344)
++|+|++||+|+ ++|+++|||+||+ |||+|||+||++++||++++++.+.+
T Consensus 100 ~~k~iaaIC~g~-~~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~vV~Dg~liTs~g~~~~~~~a~~lve~L~s 175 (177)
T 4hcj_A 100 NQKIVAGIGSGV-VIMANAKILEEINVTCLSADESHVRHGNANIMSENVVVSGNIVTANGPTSSKDFANAVVGVLNS 175 (177)
T ss_dssp TTCEEEEETTHH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGGHHHHHHHHHHHHHT
T ss_pred hCCEEEEecccH-HHHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCCEEEECCEEECCCHHHHHHHHHHHHHHHhc
Confidence 999999999999 5999999999998 89999999999999999999999864
No 38
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=99.93 E-value=5.6e-26 Score=193.58 Aligned_cols=136 Identities=21% Similarity=0.270 Sum_probs=122.7
Q ss_pred CeeehhHHHHHhCCCeEEEEEecC--CcceecCCCCEEEcCcccccccc-------C------CCchhhhcccCChHHHH
Q 019238 1 MEAVITIDVLRRSGADVVVASVEK--QLRVDACHGVKIVADALVSNCRD-------A------CGMPGATNLKESEVLES 65 (344)
Q Consensus 1 ~E~~~~~~~l~~~~~~~~~vs~~~--~~~v~~~~g~~~~~d~~~~~~~~-------~------gG~~~~~~~~~~~~~~~ 65 (344)
+|++.|+++|+++|++++++++.+ +.++++++|+++.+|..+++++. + ||+++++.+++++.+++
T Consensus 18 ~E~~~p~~vl~~ag~~v~~~s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPGG~~~~~~l~~~~~l~~ 97 (194)
T 4gdh_A 18 IEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGGGLGAKTLSTTPFVQQ 97 (194)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEEEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEEECCCchhHhHhhhCHHHHH
Confidence 488999999999999999999864 24689999999999999988742 2 88778889999999999
Q ss_pred HHHHHhhC-CCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCEEcCCCCCcHHHHHHHHH
Q 019238 66 IVKKQASD-GRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALV 119 (344)
Q Consensus 66 ~l~~~~~~-g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~~~~lv 119 (344)
||++++++ ++++++||+|+ +|+++|+|+||+ |||+|||+|+++++||++++|
T Consensus 98 ~l~~~~~~~~k~iaaiC~g~--~l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d~~vV~Dg~iiTs~g~~~~~d~al~lv 175 (194)
T 4gdh_A 98 VVKEFYKKPNKWIGMICAGT--LTAKTSGLPNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLL 175 (194)
T ss_dssp HHHHHTTCTTCEEEEEGGGG--HHHHHTTCCCSEECCCGGGHHHHHHTTCEECCSSEEEETTEEEECSGGGHHHHHHHHH
T ss_pred HHHHhhhcCCceEEeecccc--cchhhceecCCceEecCcHHHHHHhcCCeeecceEEEcCCEEECCCHhHHHHHHHHHH
Confidence 99999865 79999999999 377888899998 999999999999999999999
Q ss_pred HHHcChhHHHHHhhccccc
Q 019238 120 EQLYGKGKADEVSGARVMR 138 (344)
Q Consensus 120 ~~~~g~~~a~~v~~~~~~~ 138 (344)
|++.|++.|+++++.|+|+
T Consensus 176 e~l~G~~~a~~va~~l~~P 194 (194)
T 4gdh_A 176 EQVASKDKYNAVYKSLSMP 194 (194)
T ss_dssp HHHSCHHHHHHHHHHTTCC
T ss_pred HHHcCHHHHHHHHhhccCC
Confidence 9999999999999999874
No 39
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=99.93 E-value=2.3e-26 Score=197.26 Aligned_cols=138 Identities=22% Similarity=0.296 Sum_probs=117.0
Q ss_pred CeeehhHHHHHhCC------CeEEEEEecCCcceecCCCCEEEcCcccccc--ccC------CCchhhhcccCChHHHHH
Q 019238 1 MEAVITIDVLRRSG------ADVVVASVEKQLRVDACHGVKIVADALVSNC--RDA------CGMPGATNLKESEVLESI 66 (344)
Q Consensus 1 ~E~~~~~~~l~~~~------~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~--~~~------gG~~~~~~~~~~~~~~~~ 66 (344)
+|+..|+++|++++ |+|+++|+++ ++|++++|+++.+| .++++ +++ ||.... .. . +.+++|
T Consensus 19 ~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~-~~v~~~~G~~i~~d-~l~~~~~~~~D~livpGG~~~~-~~-~-~~l~~~ 93 (202)
T 3gra_A 19 ASFTVAMDVLVTANLLRADSFQFTPLSLDG-DRVLSDLGLELVAT-ELSAAALKELDLLVVCGGLRTP-LK-Y-PELDRL 93 (202)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEESSS-SEEEBTTSCEEECE-ECCSGGGTTCSEEEEECCTTCC-SC-C-TTHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCC-CceEcCCCCEEECC-CcccccCCCCCEEEEeCCCchh-hc-c-HHHHHH
Confidence 36788999998876 9999999996 59999999999999 99885 333 764333 22 3 899999
Q ss_pred HHHHhhCCCEEEEEchhHHHHHHHcCCCCCCC---------------------------CCCEEcCCCCCcHHHHHHHHH
Q 019238 67 VKKQASDGRLYAAICVFLAVALGSWGLLKGLK---------------------------DGKVVTTRGPGTPMEFVVALV 119 (344)
Q Consensus 67 l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~---------------------------dg~~iT~~g~~~~~~~~~~lv 119 (344)
|++++++|++|++||+|+ ++|+++|||+||+ |||+|||+|+++++||++++|
T Consensus 94 l~~~~~~g~~iaaIC~G~-~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~~v~dg~iiTs~G~~a~~dlal~li 172 (202)
T 3gra_A 94 LNDCAAHGMALGGLWNGA-WFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLV 172 (202)
T ss_dssp HHHHHHHTCEEEEETTHH-HHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEECSSSEEEETTEEEESSHHHHHHHHHHHH
T ss_pred HHHHHhhCCEEEEECHHH-HHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEecCCeEEEeCCEEECCCHHHHHHHHHHHH
Confidence 999999999999999999 6999999999998 899999999999999999999
Q ss_pred HHHcChhHHHHHhhcccccccCCCc
Q 019238 120 EQLYGKGKADEVSGARVMRANHGDE 144 (344)
Q Consensus 120 ~~~~g~~~a~~v~~~~~~~~~~~~~ 144 (344)
++++|++.|+++++.|++++.+..+
T Consensus 173 ~~~~G~~~A~~va~~l~~~~~~~~~ 197 (202)
T 3gra_A 173 RRLYGDGLAEGVEEILSFSGAREGH 197 (202)
T ss_dssp HHHHCHHHHHHHHHHHC--------
T ss_pred HHHhCHHHHHHHHHHhCcCcccccc
Confidence 9999999999999999998765443
No 40
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=99.93 E-value=1.2e-25 Score=193.34 Aligned_cols=139 Identities=36% Similarity=0.533 Sum_probs=127.0
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCc--ceecCCCCEEEcCccccccc--cC------CCchhhhcccCChHHHHHHHHHh
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQL--RVDACHGVKIVADALVSNCR--DA------CGMPGATNLKESEVLESIVKKQA 71 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~--~v~~~~g~~~~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~~~l~~~~ 71 (344)
|+..|+++|+++||+++++|++++. +|++++|+.+.+|..+++++ ++ ||..+...+..++.+++||++++
T Consensus 17 e~~~~~~~l~~ag~~v~~vs~~~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~ 96 (205)
T 2ab0_A 17 EAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFH 96 (205)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCCCceeecCCCeEEecCCCHHHCCcccCCEEEECCCcccHHHhccCHHHHHHHHHHH
Confidence 6789999999999999999999643 89999999999999998873 23 77556666778999999999999
Q ss_pred hCCCEEEEEchhH-HHHHHHcCCCCCCC-----------------------CCCE--EcCCCCCcHHHHHHHHHHHHcCh
Q 019238 72 SDGRLYAAICVFL-AVALGSWGLLKGLK-----------------------DGKV--VTTRGPGTPMEFVVALVEQLYGK 125 (344)
Q Consensus 72 ~~g~~i~aiC~g~-~~~La~aGll~g~~-----------------------dg~~--iT~~g~~~~~~~~~~lv~~~~g~ 125 (344)
++|++|++||+|+ + +|+++|||+||+ |||+ |||+|+++++||++++++++.|+
T Consensus 97 ~~gk~i~aiC~G~~~-lLa~aGlL~G~~~T~~~~~~~~~~~~~~~~~~vv~Dg~i~viTs~g~~s~~d~al~li~~l~g~ 175 (205)
T 2ab0_A 97 RSGRIVAAICAAPAT-VLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGR 175 (205)
T ss_dssp HTTCEEEEETHHHHH-HTTTTTSSSSSCBCCCGGGGGGSCTTTBCCCSEEEETTTTEEEECSGGGHHHHHHHHHHHHTCH
T ss_pred HcCCEEEEECHhHHH-HHHHCCccCCCeEEeCccHHHHccCCEEecCCEEEeCCcCeEECcChhhHHHHHHHHHHHhcCh
Confidence 9999999999999 8 999999999998 8999 99999999999999999999999
Q ss_pred hHHHHHhhcccccccC
Q 019238 126 GKADEVSGARVMRANH 141 (344)
Q Consensus 126 ~~a~~v~~~~~~~~~~ 141 (344)
+.|+++++.|++++.+
T Consensus 176 ~~a~~va~~l~~~~~r 191 (205)
T 2ab0_A 176 EKAHEVASQLVMAAGI 191 (205)
T ss_dssp HHHHHHHTTTTCCTTS
T ss_pred HHHHHHHHhcccCCCC
Confidence 9999999999998754
No 41
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=99.91 E-value=2.7e-24 Score=185.87 Aligned_cols=137 Identities=21% Similarity=0.271 Sum_probs=122.2
Q ss_pred CeeehhHHHHH--------hCCCeEEEEEecCCcceecCCCCEEEcCccccccc--cC------CCchhhhcccCChHHH
Q 019238 1 MEAVITIDVLR--------RSGADVVVASVEKQLRVDACHGVKIVADALVSNCR--DA------CGMPGATNLKESEVLE 64 (344)
Q Consensus 1 ~E~~~~~~~l~--------~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~ 64 (344)
+|+..|+++|+ +++|+|+++|+++ .+|++++|+.+.+|..+++++ ++ ||. +. .+..++.++
T Consensus 19 ~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~-~~v~~~~G~~i~~d~~~~~~~~~~~D~livpGG~-~~-~~~~~~~l~ 95 (212)
T 3efe_A 19 WEYGYLIAELNSGRYFKKDLAPLKVITVGANK-EMITTMGGLRIKPDISLDECTLESKDLLILPGGT-TW-SEEIHQPIL 95 (212)
T ss_dssp TTTHHHHHHHHHCTTSCTTCCCCCEEEEESSS-CCEECTTCCEECCSEEGGGCCCCTTCEEEECCCS-CT-TSGGGHHHH
T ss_pred HHHHHHHHHHHhhhccccCCCCeEEEEEECCC-CeEEcCCCCEEecCcCHHHCCccCCCEEEECCCC-cc-ccccCHHHH
Confidence 47889999999 7899999999996 599999999999999999886 33 664 22 356889999
Q ss_pred HHHHHHhhCCCEEEEEchhHHHHHHHcCCCCCCC-----------------------------CCCEEcCCCCCcHHHHH
Q 019238 65 SIVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------------------------DGKVVTTRGPGTPMEFV 115 (344)
Q Consensus 65 ~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------------------------dg~~iT~~g~~~~~~~~ 115 (344)
+||+++++++++|++||+|+ ++|+++|||+||+ |||+|||+|++ ++||+
T Consensus 96 ~~l~~~~~~gk~iaaiC~G~-~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~~~~~~~~~~V~Dg~iiTs~G~~-~~d~a 173 (212)
T 3efe_A 96 ERIGQALKIGTIVAAICGAT-DALANMGYLDTRKHTSNNLEYTKMVCPNYKGEKFYELGPAVSDANLVTASGIA-PLEFA 173 (212)
T ss_dssp HHHHHHHHHTCEEEEETHHH-HHHHHTTTTSSSCBCCSCHHHHHHHCTTCCCTTTBCCCSEEEETTEEEECTTC-HHHHH
T ss_pred HHHHHHHHCCCEEEEEcHHH-HHHHHcCCCCCCeeecCCHHHHHHHHhhCCCccccCCCcEEEECCEEECCCch-HHHHH
Confidence 99999999999999999999 5999999999998 99999999996 99999
Q ss_pred HHHHHHHcChhHHHHHhhcccccccCCC
Q 019238 116 VALVEQLYGKGKADEVSGARVMRANHGD 143 (344)
Q Consensus 116 ~~lv~~~~g~~~a~~v~~~~~~~~~~~~ 143 (344)
+++|+++.|+ .++++++.+.|.+..++
T Consensus 174 l~li~~l~g~-~a~~va~~~~~~~~g~~ 200 (212)
T 3efe_A 174 MEVLKKIDVF-TLDALHSWYNLNKTHKP 200 (212)
T ss_dssp HHHHHHHTCS-CHHHHHHHHHHHHHCCT
T ss_pred HHHHHHhcCC-CHHHHHHHHHHHcCCCH
Confidence 9999999997 89999999999764433
No 42
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=99.91 E-value=2.9e-24 Score=187.96 Aligned_cols=136 Identities=24% Similarity=0.330 Sum_probs=120.7
Q ss_pred CeeehhHHHHHhCC--CeEEEEEecCCcceecCCCCEEEcCccccccccC------CCchhhhcccCChHHHHHHHHHhh
Q 019238 1 MEAVITIDVLRRSG--ADVVVASVEKQLRVDACHGVKIVADALVSNCRDA------CGMPGATNLKESEVLESIVKKQAS 72 (344)
Q Consensus 1 ~E~~~~~~~l~~~~--~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (344)
+|+..|+++|++++ |+++++| ++ .+|++++|+.+.+|..+++.+++ ||..+...+..++.+++|| +++
T Consensus 34 ~e~~~p~dvl~~~~~~~~v~~vs-~~-~~V~ss~G~~v~~d~~l~~~~~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~ 109 (236)
T 3bhn_A 34 VDFFLMNDLLGRTSDSWTVRILG-TK-PEHHSQLGMTVKTDGHVSEVKEQDVVLITSGYRGIPAALQDENFMSAL--KLD 109 (236)
T ss_dssp HHHHHHHHHHTTCSSSEEEEEEE-SS-SEEEBTTCCEEECSEEGGGGGGCSEEEECCCTTHHHHHHTCHHHHHHC--CCC
T ss_pred HHHHHHHHHHHcCCCCEEEEEEE-CC-CcEEecCCcEEecCcccccccCCCEEEEcCCccCHhhhccCHHHHHHH--HhC
Confidence 37889999998876 8999999 75 59999999999999999886544 6634555677899999999 666
Q ss_pred CCC-EEEEEchhHHHHHHHcCCCCCCC-------------------------CCCEEcCCCCCcHHHHHHHHHHHHcChh
Q 019238 73 DGR-LYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKG 126 (344)
Q Consensus 73 ~g~-~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g~~ 126 (344)
+++ +|++||+|+ ++|+++|||+||+ |||+|||+|+++++||++++|+++.|++
T Consensus 110 ~~~~~IaaIC~G~-~lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~~vV~Dg~iiTs~G~~a~~dlal~lIe~l~G~~ 188 (236)
T 3bhn_A 110 PSRQLIGSICAGS-FVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDLPLVIEGNIATAGGCLSLLYLVGWLAERLFDSV 188 (236)
T ss_dssp TTTCEEEEETTHH-HHHHHTTTTTTCEECCCGGGHHHHHHTTCEECSSSEEEETTEEEECSGGGHHHHHHHHHHHHSCHH
T ss_pred CCCCEEEEEcHHH-HHHHHcCCCCCCEEECCHHHHHHHHHhCCccCCCcEEEeCCEEECCCHHHHHHHHHHHHHHhcCHH
Confidence 666 999999999 5999999999998 8999999999999999999999999999
Q ss_pred HHHHHhhcccccccC
Q 019238 127 KADEVSGARVMRANH 141 (344)
Q Consensus 127 ~a~~v~~~~~~~~~~ 141 (344)
.|+++++.|+|++..
T Consensus 189 ~A~~va~~l~~~~~~ 203 (236)
T 3bhn_A 189 KRKQIQNQLIPAGQM 203 (236)
T ss_dssp HHHHHHTTTSCTTCH
T ss_pred HHHHHHHhcccCCCC
Confidence 999999999998754
No 43
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=99.90 E-value=1e-23 Score=181.09 Aligned_cols=133 Identities=23% Similarity=0.278 Sum_probs=118.5
Q ss_pred CeeehhHHHHHhC-CCeEEEEEecCCcceecCCCCEEEcCccccccc-cC------CCchhhhcccCChHHHHHHHHHhh
Q 019238 1 MEAVITIDVLRRS-GADVVVASVEKQLRVDACHGVKIVADALVSNCR-DA------CGMPGATNLKESEVLESIVKKQAS 72 (344)
Q Consensus 1 ~E~~~~~~~l~~~-~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~-~~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (344)
+|++.|+++|+++ +|+++++|+++ . |++++|+.+.+|..+++++ ++ ||. +... .++.+++||+++++
T Consensus 17 ~E~~~~~~~l~~~~~~~v~~vs~~~-~-V~~~~G~~v~~d~~l~~~~~~~D~livpGG~-~~~~--~~~~l~~~l~~~~~ 91 (206)
T 3f5d_A 17 WEGVYLASALNQREDWSVHTVSLDP-I-VSSIGGFKTSVDYIIGLEPANFNLLVMIGGD-SWSN--DNKKLLHFVKTAFQ 91 (206)
T ss_dssp TTSHHHHHHHHTSTTEEEEEEESSS-E-EEBTTSCEEECSEETTSSCSCCSEEEECCBS-CCCC--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCeEEEEEECCC-C-EEecCCcEEecCcChhhCCcCCCEEEEcCCC-Chhh--cCHHHHHHHHHHHH
Confidence 5889999999988 99999999996 5 9999999999999998875 23 664 4433 89999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCC----------------------------CCCEEcCCCCCcHHHHHHHHHHHHcC
Q 019238 73 DGRLYAAICVFLAVALGSWGLLKGLK----------------------------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (344)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~----------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g 124 (344)
++++|++||+|+ ++|+++|||+||+ |||+|||+|++ ++||++++|+++.
T Consensus 92 ~gk~iaaiC~G~-~~La~aGLL~Gr~aTthw~~~~~~~~~~~~~~~~~~~~~V~Dg~iiTs~G~a-~id~al~li~~l~- 168 (206)
T 3f5d_A 92 KNIPIAAICGAV-DFLAKNGLLNNHSHTGNFVYLWKDYKQYKPISSFVEKQAVRDKNLVTANGTA-PIEFTNLILEMID- 168 (206)
T ss_dssp TTCCEEEETHHH-HHHHHTTTTTTSCBCCSCGGGGTTCTTCCCSSCBCCSSEEEETTEEEECTTC-HHHHHHHHHHHTT-
T ss_pred cCCEEEEECHHH-HHHHHcCCCCCCEEEccCHHHhhhhHhhcCCCeEccCCEEEECCEEECCCch-HHHHHHHHHHHhC-
Confidence 999999999999 5999999999988 89999999996 9999999999765
Q ss_pred hhHHHHHhhcccccccC
Q 019238 125 KGKADEVSGARVMRANH 141 (344)
Q Consensus 125 ~~~a~~v~~~~~~~~~~ 141 (344)
.+.|+++++.|++.+..
T Consensus 169 ~~~a~~va~~~~~~~~g 185 (206)
T 3f5d_A 169 FDTPENIEKMMYMNRYG 185 (206)
T ss_dssp CSCHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHhhhhhcc
Confidence 68999999999987643
No 44
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=99.89 E-value=2.5e-23 Score=176.89 Aligned_cols=126 Identities=26% Similarity=0.308 Sum_probs=111.9
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcceec-----CCCCEEEcCccccccc--cC------CCchhhhcccCChHHHHHHH
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVDA-----CHGVKIVADALVSNCR--DA------CGMPGATNLKESEVLESIVK 68 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~~-----~~g~~~~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~~~l~ 68 (344)
|+..|+++|++++|+++++|+++ .++++ ++|+.+.+|..+++++ ++ ||......+..++.+++||+
T Consensus 24 e~~~~~~~l~~ag~~v~~vs~~~-~~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~~l~~~l~ 102 (190)
T 2vrn_A 24 ELTSPRAAIEAAGGTTELISLEP-GEIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTVNPDKLRLEEGAMKFVR 102 (190)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSS-SEEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEecCC-CccccccccccCCcEEeCCCChhhCChhhCCEEEECCCchhHHHHhhCHHHHHHHH
Confidence 67899999999999999999996 47877 7899999999998873 33 77556666788999999999
Q ss_pred HHhhCCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCEEcCCCCCcHHHHHHHHHHHH-
Q 019238 69 KQASDGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQL- 122 (344)
Q Consensus 69 ~~~~~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~~~~lv~~~- 122 (344)
++++++++|++||+|+ ++|+++|||+||+ |||+|||+|+.+++||++++|+++
T Consensus 103 ~~~~~gk~i~aiC~G~-~~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~~~~v~Dg~iiTs~g~~s~~~~~l~li~~l~ 181 (190)
T 2vrn_A 103 DMYDAGKPIAAICHGP-WSLSETGIAQGLKMTSWSSLKRELTLAGAQWVDEECVTDKGVVTSRKPDDLPAFNKKIVEEFA 181 (190)
T ss_dssp HHHHTTCCEEEC-CTT-HHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSCEEETTEEECSSGGGHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECHhH-HHHHhCcccCCcEEecCccHHHHHHHcCCeEECCCEEEcCCEEEcCChhhHHHHHHHHHHHHh
Confidence 9999999999999999 5999999999998 899999999999999999999999
Q ss_pred cChhHHH
Q 019238 123 YGKGKAD 129 (344)
Q Consensus 123 ~g~~~a~ 129 (344)
.|++.|+
T Consensus 182 ~g~~~a~ 188 (190)
T 2vrn_A 182 EGDHSSR 188 (190)
T ss_dssp HCCCGGG
T ss_pred ccccccc
Confidence 8876553
No 45
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.88 E-value=2.4e-23 Score=192.09 Aligned_cols=133 Identities=25% Similarity=0.371 Sum_probs=119.6
Q ss_pred CeeehhHHHHHhCCCeEEEEEecCCcceecCCCC-EEEcCccccccc--cC------CCchhhhcccCChHHHHHHHHHh
Q 019238 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGV-KIVADALVSNCR--DA------CGMPGATNLKESEVLESIVKKQA 71 (344)
Q Consensus 1 ~E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~-~~~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~~~l~~~~ 71 (344)
+|+..|+++|+++||+|+++|++++..|++++|+ .+.+|..+++++ ++ ||. +...+..++.+.+||++++
T Consensus 24 ~El~~p~dvL~~Ag~~v~vvS~~~g~~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~-g~~~l~~~~~l~~~Lr~~~ 102 (365)
T 3fse_A 24 TEFIIPCNGLKQAGFEVVVLGSRMNEKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGM-APDKMRRNPNTVRFVQEAM 102 (365)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSCCEECTTSCCEECCSEETTTCCGGGCSEEEECCBT-HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCceeecCCCceEEeCCCCHhhCCCcCCCEEEEECCc-chhhccCCHHHHHHHHHHH
Confidence 3778999999999999999999975339999999 999999999875 23 664 5566788999999999999
Q ss_pred hCCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCEEcCCCCCcHHHHHHHHHHHHcChh
Q 019238 72 SDGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQLYGKG 126 (344)
Q Consensus 72 ~~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g~~ 126 (344)
++|++|++||+|+ ++|+++|||+||+ |||+|||+|+++++||++++|+++.|+.
T Consensus 103 ~~gk~IaAIC~G~-~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~~vV~DGniITs~G~~a~~d~al~lIe~L~g~~ 181 (365)
T 3fse_A 103 EQGKLVAAVCHGP-QVLIEGDLLRGKQATGFIAISKDMMNAGADYLDEALVVDGNLITSREPGDLAIFTTAILSRLGYGG 181 (365)
T ss_dssp HTTCEEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGHHHHHHHHHHHTTCCC
T ss_pred HCCCEEEEECHHH-HHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecCcEEEECCEEECCCHHHHHHHHHHHHHHhcCch
Confidence 9999999999999 6999999999998 9999999999999999999999999998
Q ss_pred HHHHHhhcc
Q 019238 127 KADEVSGAR 135 (344)
Q Consensus 127 ~a~~v~~~~ 135 (344)
.+.++++.+
T Consensus 182 ~A~~lA~~~ 190 (365)
T 3fse_A 182 KDAALPDEK 190 (365)
T ss_dssp SSSCCCCTT
T ss_pred HHHHHhhhh
Confidence 887777665
No 46
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=99.88 E-value=6.1e-23 Score=170.96 Aligned_cols=118 Identities=25% Similarity=0.347 Sum_probs=108.1
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCcccccccc--C------CCchhhhcccCChHHHHHHHHHhhC
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD--A------CGMPGATNLKESEVLESIVKKQASD 73 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~--~------gG~~~~~~~~~~~~~~~~l~~~~~~ 73 (344)
|+..|+++|+++||+++++|+++ .++++++|+.+.+|..+++++. + ||. +...+..++.+++||++++++
T Consensus 17 e~~~~~~~l~~ag~~v~~vs~~~-~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~~~~~~~l~~~l~~~~~~ 94 (168)
T 3l18_A 17 ELIYPLHRIKEEGHEVYVASFQR-GKITGKHGYSVNVDLTFEEVDPDEFDALVLPGGK-APEIVRLNEKAVMITRRMFED 94 (168)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSS-EEEECTTSCEEEECEEGGGCCGGGCSEEEECCBS-HHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEEEECCC-CEEecCCCcEEeccCChhHCCHhhCCEEEECCCc-CHHHhccCHHHHHHHHHHHHC
Confidence 67899999999999999999996 6999999999999999998852 3 664 556677899999999999999
Q ss_pred CCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCCEEcCCCCCcHHHHHHHHHHHH
Q 019238 74 GRLYAAICVFLAVALGSWGLLKGLK-------------------------DGKVVTTRGPGTPMEFVVALVEQL 122 (344)
Q Consensus 74 g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~~iT~~g~~~~~~~~~~lv~~~ 122 (344)
+++|++||+|+ ++|+++|||+||+ |||+|||+|+.+++||++++|+++
T Consensus 95 ~k~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~iiT~~g~~~~~d~~l~li~~l 167 (168)
T 3l18_A 95 DKPVASICHGP-QILISAKVLKGRRGTSTITIRDDVINAGAEWIDAEVVVDGNWVSSRHPGDLYAWMREFVKLL 167 (168)
T ss_dssp TCCEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTEEEECSGGGHHHHHHHHGGGC
T ss_pred CCEEEEECHhH-HHHHHCCccCCCEEEeCccHHHHHHhCCCEEecCCEEEeCCEEEcCCHHHHHHHHHHHHHhh
Confidence 99999999999 5999999999998 999999999999999999999875
No 47
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=99.88 E-value=2.6e-22 Score=170.23 Aligned_cols=131 Identities=27% Similarity=0.386 Sum_probs=115.2
Q ss_pred CeeehhHHHHHh-CCCeEEEEEecCCcceecCCCCEEEcCccccccc--cC------CCchhhhcccCChHHHHHHHHHh
Q 019238 1 MEAVITIDVLRR-SGADVVVASVEKQLRVDACHGVKIVADALVSNCR--DA------CGMPGATNLKESEVLESIVKKQA 71 (344)
Q Consensus 1 ~E~~~~~~~l~~-~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~~~l~~~~ 71 (344)
+|+..|+++|++ ++|+++++|+++ .+|++++|+.+.+|..+++++ ++ ||.. .. +..++.+++||++++
T Consensus 15 ~e~~~~~~~l~~a~~~~v~~vs~~~-~~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~-~~-~~~~~~l~~~l~~~~ 91 (188)
T 2fex_A 15 WEPALLAAAARSYLGVEIVHATPDG-MPVTSMGGLKVTPDTSYDALDPVDIDALVIPGGLS-WE-KGTAADLGGLVKRFR 91 (188)
T ss_dssp TSSHHHHHHHHHHSCCEEEEEETTS-SCEECTTCCEEECSEEGGGCCTTTCSEEEECCBSH-HH-HTCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCceEEEEeCCC-CceeeCCCcEEeccccHHHCCcccCCEEEECCCCc-cc-ccccHHHHHHHHHHH
Confidence 478899999999 999999999996 599999999999999998876 33 6642 22 457899999999999
Q ss_pred hCCCEEEEEchhHHHHHHHcCCCCCCC-----------------------------CCCEEcCCCCCcHHHHHHHHHHHH
Q 019238 72 SDGRLYAAICVFLAVALGSWGLLKGLK-----------------------------DGKVVTTRGPGTPMEFVVALVEQL 122 (344)
Q Consensus 72 ~~g~~i~aiC~g~~~~La~aGll~g~~-----------------------------dg~~iT~~g~~~~~~~~~~lv~~~ 122 (344)
+++++|++||+|+ ++|+++|||+||+ |||+|||+|++ ++||++++|+++
T Consensus 92 ~~~k~i~aiC~G~-~~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~~-~~d~al~lv~~l 169 (188)
T 2fex_A 92 DRDRLVAGICAAA-SALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQPRAVSDGGVVTAAGSA-PVSFAVEILKSL 169 (188)
T ss_dssp HTTCEEEEETHHH-HHHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCSSCEEETTEEEECTTC-HHHHHHHHHHHT
T ss_pred HCCCEEEEECHHH-HHHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCCCEEEECCEEECCCcc-HHHHHHHHHHHc
Confidence 9999999999999 5999999999988 78999999996 899999999999
Q ss_pred cChhHHHHHhhccccc
Q 019238 123 YGKGKADEVSGARVMR 138 (344)
Q Consensus 123 ~g~~~a~~v~~~~~~~ 138 (344)
.|.+.++ ++.+.|.
T Consensus 170 ~~~~~~~--~~~~~~~ 183 (188)
T 2fex_A 170 GLFGPEA--EAELQIF 183 (188)
T ss_dssp TCCSHHH--HHHHGGG
T ss_pred cCCCHHH--HHHHHHH
Confidence 9998776 6666554
No 48
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.88 E-value=6.1e-22 Score=196.10 Aligned_cols=158 Identities=14% Similarity=0.141 Sum_probs=135.8
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~ 239 (344)
++||+||++|||++.|+..++++|+.+|++++++|++++ +|.++.|..+.++..++++++.+||+|+||||......+.
T Consensus 534 ~rkVaILl~dGfe~~El~~p~dvL~~AG~~V~ivS~~gg-~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~~~~l~ 612 (715)
T 1sy7_A 534 SRRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRS-KVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAETLS 612 (715)
T ss_dssp TCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSS-CEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHHHH
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHhcCCEEEEEECCCC-ceecCCCceEecccccccCCcccCCEEEEcCCcccHhhhc
Confidence 479999999999999999999999999999999999997 8999999999999999988777899999999964566678
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc-CCCCCCeeeeCcCchhhhccCCcCCCcEEEeCCeEeCCCcc-----
Q 019238 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPH-GLLKGKKATAFPAMCNKLSNQSEIENRVVVDGNLVTSRGPG----- 313 (344)
Q Consensus 240 ~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a-GlL~g~~~T~~~~~~~~~~~~~~~~~~~v~dg~liT~~g~~----- 313 (344)
.++.+++||+++++++|+|++||+|+. +|+++ ||.+-+.+. ...+|+||++||++|+.
T Consensus 613 ~~~~l~~~Lr~~~~~gK~IaAIC~G~~-lLA~AlGL~~L~~aG---------------a~~VVvDg~lITs~gp~~~~l~ 676 (715)
T 1sy7_A 613 KNGRALHWIREAFGHLKAIGATGEAVD-LVAKAIALPQVTVSS---------------EAEVHESYGVVTLKKVKPESFT 676 (715)
T ss_dssp TCHHHHHHHHHHHHTTCEEEEETTHHH-HHHHHHCCTTSCCCC---------------SSSCEEETTEEEESSCCTTTTT
T ss_pred cCHHHHHHHHHHHhCCCEEEEECHHHH-HHHHccCcHhHHhcC---------------CCcEEEeCCEEECCCCcccccc
Confidence 899999999999999999999999975 59999 984322211 25799999999999986
Q ss_pred -------cHHHHHHHHHHHhcCHHHHHH
Q 019238 314 -------TSMEFALAIVEKFFGRNKALE 334 (344)
Q Consensus 314 -------~~~~~~~~li~~l~g~~~a~~ 334 (344)
++.+|+.++++.+......++
T Consensus 677 ~~~~i~~s~~~fa~~fi~~L~~hR~W~R 704 (715)
T 1sy7_A 677 DAVKIAKGAAGFLGEFFYAIAQHRNWDR 704 (715)
T ss_dssp SCCCCSTTCSSHHHHHHHHHHTCSCHHH
T ss_pred cccccccCHHHHHHHHHHHHHcCCcccc
Confidence 667788888888865444333
No 49
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=99.86 E-value=1.1e-21 Score=166.97 Aligned_cols=119 Identities=21% Similarity=0.285 Sum_probs=107.8
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcc-eecCCCC-EEEcCccccccc--cC------CCchhhhcccCChHHHHHHHHHh
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLR-VDACHGV-KIVADALVSNCR--DA------CGMPGATNLKESEVLESIVKKQA 71 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~-v~~~~g~-~~~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~~~l~~~~ 71 (344)
|+..|+++|+++||+++++|++++ + |++++|+ .+.+|..+++++ ++ || .+...+..++.+.+||++++
T Consensus 38 e~~~~~~~l~~ag~~v~~vs~~~~-~~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG-~~~~~l~~~~~l~~~l~~~~ 115 (193)
T 1oi4_A 38 EFTSPADEFRKAGHEVITIEKQAG-KTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGG-HSPDYLRGDNRFVTFTRDFV 115 (193)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSTT-CEEECTTSSCEEECCEEGGGCCGGGCSEEEECCB-THHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCC-cceecCCCCeEEECCCChHHCCcccCCEEEECCC-cCHHHhhhCHHHHHHHHHHH
Confidence 677899999999999999999964 6 9999999 999999998873 22 66 45666778999999999999
Q ss_pred hCCCEEEEEchhHHHHHHHcCCCCCCC-------------------------CCC-EEcCCCCCcHHHHHHHHHHHHc
Q 019238 72 SDGRLYAAICVFLAVALGSWGLLKGLK-------------------------DGK-VVTTRGPGTPMEFVVALVEQLY 123 (344)
Q Consensus 72 ~~g~~i~aiC~g~~~~La~aGll~g~~-------------------------dg~-~iT~~g~~~~~~~~~~lv~~~~ 123 (344)
+++++|++||+|+ ++|+++|||+||+ ||| +|||+|+++++||++++|+++.
T Consensus 116 ~~gk~i~aIC~G~-~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~~v~Dg~~iiTs~g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 116 NSGKPVFAICHGP-QLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLG 192 (193)
T ss_dssp HTTCCEEEETTTH-HHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETTTEEEESSGGGHHHHHHHHHHHHC
T ss_pred HcCCEEEEECHHH-HHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCCEEEECCEEEECCCcchHHHHHHHHHHHhh
Confidence 9999999999999 5999999999998 899 9999999999999999999874
No 50
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.85 E-value=2.3e-21 Score=162.47 Aligned_cols=117 Identities=20% Similarity=0.351 Sum_probs=102.8
Q ss_pred hhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCcccccc----ccC------CC--chhhhccc---CChHHHHHHHH
Q 019238 5 ITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNC----RDA------CG--MPGATNLK---ESEVLESIVKK 69 (344)
Q Consensus 5 ~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~----~~~------gG--~~~~~~~~---~~~~~~~~l~~ 69 (344)
...+.+.+++|+++++|+++++++++++|+.+.+|..++++ +++ || .++...+. .++.+++||++
T Consensus 20 ~~~e~~~~~~~~v~~vs~~~~~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~ 99 (175)
T 3cne_A 20 QYLEAFFENGISYKVFAVSDTKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKT 99 (175)
T ss_dssp HHHHHHHHTTCEEEEEESSSSSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHH
T ss_pred hhhheeeeCCCEEEEEECCCCCceecCCCeEEEeccCHHHhccCcccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHH
Confidence 44555568899999999995469999999999999999887 333 77 54565566 78999999999
Q ss_pred HhhCCCEEEEEchhHHHHHHHcCCCCCCC-----------------------CCCEEcCCCCCcHHHHHHHHHHHH
Q 019238 70 QASDGRLYAAICVFLAVALGSWGLLKGLK-----------------------DGKVVTTRGPGTPMEFVVALVEQL 122 (344)
Q Consensus 70 ~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------------------dg~~iT~~g~~~~~~~~~~lv~~~ 122 (344)
+++++++|++||+|+ ++|+++|||+||+ |||+|||+|+++++||++++|+++
T Consensus 100 ~~~~gk~i~aiC~G~-~~La~aGlL~G~~~T~~~~~~~~l~~~~~~~~~~v~Dg~iiTs~g~~~~~d~al~li~~l 174 (175)
T 3cne_A 100 FGEKGKMMIGHCAGA-MMFDFTGITKGKKVAVHPLAKPAIQNGIATDEKSEIDGNFFTAQDENTIWTMLPKVIEAL 174 (175)
T ss_dssp HHHTTCEEEEETTHH-HHHHHTTTTTTCEEECCGGGGGGCCSSEEESSSEEEETTEEEESSGGGGGGTHHHHHHHH
T ss_pred HHHCCCEEEEECHHH-HHHHHCCCcCCCEEEeCccHHHHhhcCEEeCCCEEEeCCEEeCCChHHHHHHHHHHHHHh
Confidence 999999999999999 5999999999998 899999999999999999999986
No 51
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.82 E-value=6.1e-21 Score=167.67 Aligned_cols=123 Identities=20% Similarity=0.279 Sum_probs=104.7
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCccee---------------------cCCCCEEEcCcccccccc--C------CCch
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVD---------------------ACHGVKIVADALVSNCRD--A------CGMP 52 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~---------------------~~~g~~~~~d~~~~~~~~--~------gG~~ 52 (344)
|++.|+++|+++|++++++|++|+.++. ++.+..+.+|..+++++. + ||++
T Consensus 30 E~~~p~~~l~~aG~~V~iaS~~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~v~~~~yD~l~vpGG~~ 109 (244)
T 3kkl_A 30 EILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKVFFASAGHG 109 (244)
T ss_dssp HHHHHHHHHHTTTCEEEEEESSSCCCBCTTC--------------------CHHHHHTCEEGGGCCGGGCSEEEECCSTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCCCcCCccccccccCHHHHHHHHHhhHHHHHHhcCCCChHHCCHhhCCEEEEcCCCc
Confidence 8899999999999999999999753331 123456777888888752 2 8876
Q ss_pred hhhcccCChHHHHHHHHHhhCCCEEEEEchhHHHHHHHc-------CCCCCCC---------------------------
Q 019238 53 GATNLKESEVLESIVKKQASDGRLYAAICVFLAVALGSW-------GLLKGLK--------------------------- 98 (344)
Q Consensus 53 ~~~~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a-------Gll~g~~--------------------------- 98 (344)
....+..++.+.+||++++++|++|++||+|+ ++|+++ |||+||+
T Consensus 110 ~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~-~~La~a~~~~~g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~~~l~ 188 (244)
T 3kkl_A 110 ALFDYPKAKNLQDIASKIYANGGVIAAICHGP-LLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVE 188 (244)
T ss_dssp HHHHGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTTSSBTTTTCEECCSCHHHHHHHTTHHHHHHTTCCCHH
T ss_pred hhhhcccCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHhhccccCCceeCCceecCCCcHHHHhhhhhhhccccccccHH
Confidence 66778899999999999999999999999999 599999 9999976
Q ss_pred -----------------------CCCEEcCCCCCcHHHHHHHHHHHHcCh
Q 019238 99 -----------------------DGKVVTTRGPGTPMEFVVALVEQLYGK 125 (344)
Q Consensus 99 -----------------------dg~~iT~~g~~~~~~~~~~lv~~~~g~ 125 (344)
|||+|||+||.++++|++++|+++.+-
T Consensus 189 ~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~ 238 (244)
T 3kkl_A 189 RVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSV 238 (244)
T ss_dssp HHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC-
T ss_pred HHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhh
Confidence 689999999999999999999999864
No 52
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.81 E-value=1.2e-20 Score=164.53 Aligned_cols=122 Identities=25% Similarity=0.304 Sum_probs=106.3
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcceecCC--------C-----CEEEcCccccccc--cC------CCchhhhcccCC
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVDACH--------G-----VKIVADALVSNCR--DA------CGMPGATNLKES 60 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~--------g-----~~~~~d~~~~~~~--~~------gG~~~~~~~~~~ 60 (344)
|+..|+++|+++||+++++|+++ .++.+.. | ..+.++..+++++ ++ ||......+..+
T Consensus 30 e~~~p~~~l~~ag~~v~~vs~~~-~~v~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~D~livpGG~~~~~~l~~~ 108 (224)
T 1u9c_A 30 EFAVPYLVFQEKGYDVKVASIQG-GEVPLDPRSINEKDPSWAEAEAALKHTARLSKDDAHGFDAIFLPGGHGTMFDFPDN 108 (224)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSC-BCCCBCGGGSSSCCGGGHHHHHHTTSBEECCGGGGSSCSEEEECCCTTHHHHSTTC
T ss_pred HHHHHHHHHHHCCCeEEEECCCC-CccccCccccccHHHHHhhhhHhhcCCCChHHcChhhCCEEEECCCcchHHHhhcC
Confidence 78899999999999999999996 4665442 3 6788888888874 23 776555568889
Q ss_pred hHHHHHHHHHhhCCCEEEEEchhHHHHHHHcC------CCCCCC------------------------------------
Q 019238 61 EVLESIVKKQASDGRLYAAICVFLAVALGSWG------LLKGLK------------------------------------ 98 (344)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG------ll~g~~------------------------------------ 98 (344)
+.+++||+++++++++|++||+|+ ++|+++| ||+||+
T Consensus 109 ~~l~~~l~~~~~~~k~iaaiC~G~-~~La~ag~~~g~~lL~Gr~~T~~~~~~~~~~~~~~~~p~~~~~~l~~~g~~~~~~ 187 (224)
T 1u9c_A 109 ETLQYVLQQFAEDGRIIAAVCHGP-SGLVNATYKDGTPIVKGKTVTSFTDEEEREVGLDVHMPFLLESTLRLRGANFVRG 187 (224)
T ss_dssp HHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTSCBTTTTCEECCSCHHHHHHHTCGGGSSSCHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHHHHCCCEEEEEChHH-HHHHHccccCCCceecCcEEecCCCHHHhhccccccCCccHHHHHHHcCCEEecC
Confidence 999999999999999999999999 5999999 999976
Q ss_pred ---------CCCEEcCCCCCcHHHHHHHHHHHHcCh
Q 019238 99 ---------DGKVVTTRGPGTPMEFVVALVEQLYGK 125 (344)
Q Consensus 99 ---------dg~~iT~~g~~~~~~~~~~lv~~~~g~ 125 (344)
|||+|||+|+++++||++++|+++.|+
T Consensus 188 ~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~ 223 (224)
T 1u9c_A 188 GKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEER 223 (224)
T ss_dssp STTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTT
T ss_pred CCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhcc
Confidence 689999999999999999999999886
No 53
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.79 E-value=7.2e-19 Score=172.46 Aligned_cols=113 Identities=12% Similarity=0.134 Sum_probs=106.6
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
+.+||+||+.|||++.|+..+++.|+++|++++++|++++ +|.++.|..+.+|.+++++.+.+||+|+|||| +...+
T Consensus 599 ~grKVaILlaDGfEe~El~~pvdaLr~AG~~V~vVS~~~g-~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG--g~~~L 675 (753)
T 3ttv_A 599 KGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMG-EVTADDGTVLPIAATFAGAPSLTVDAVIVPCG--NIADI 675 (753)
T ss_dssp TTCEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSS-EEECTTSCEEECCEETTTSCGGGCSEEEECCS--CGGGT
T ss_pred CCCEEEEEecCCCCHHHHHHHHHHHHHCCCEEEEEEcCCC-eEEeCCCCEEecccchhhCCCcCCCEEEECCC--ChHHh
Confidence 4689999999999999999999999999999999999997 89999999999999999998888999999999 46778
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCC
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLL 275 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL 275 (344)
..++.+++||+++++++|+|++||+|+++ |+++||-
T Consensus 676 r~d~~vl~~Vre~~~~gKpIAAIC~Gp~l-La~AGL~ 711 (753)
T 3ttv_A 676 ADNGDANYYLMEAYKHLKPIALAGDARKF-KATIKIA 711 (753)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEEGGGGGG-GGGGTCC
T ss_pred hhCHHHHHHHHHHHhcCCeEEEECchHHH-HHHcCCC
Confidence 89999999999999999999999999866 9999984
No 54
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.78 E-value=6.2e-20 Score=161.32 Aligned_cols=122 Identities=20% Similarity=0.215 Sum_probs=101.4
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcceecC---------------------CCCEEEc-Ccccccccc--C------CCc
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVDAC---------------------HGVKIVA-DALVSNCRD--A------CGM 51 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~---------------------~g~~~~~-d~~~~~~~~--~------gG~ 51 (344)
|++.|+++|+++|++|+++|++++.++... .+..+.+ +..+++++. + ||+
T Consensus 36 E~~~p~~~l~~aG~~V~~aSp~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~v~~~~yD~l~ipGG~ 115 (247)
T 3n7t_A 36 EALHPFNELTAAGFEVDVASETGTFGWDEHSLTQEYLSKEDEKVLHSEHNHFMEKMNKQVFKAGDLAPHDYGLMFVCGGH 115 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSSCCCBCSGGGSGGGCCHHHHHHHTCSSCHHHHHHHHCCEEGGGSCGGGCSEEEECCST
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCcccCcccccccccCHHHHHHHHhhhHHHHHHHhccCCCHHHCChhhCCEEEEeCCC
Confidence 889999999999999999999975333111 1223555 777777752 2 776
Q ss_pred hhhhcccCChHHHHHHHHHhhCCCEEEEEchhHHHHHHHc------CCCCCCC---------------------------
Q 019238 52 PGATNLKESEVLESIVKKQASDGRLYAAICVFLAVALGSW------GLLKGLK--------------------------- 98 (344)
Q Consensus 52 ~~~~~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a------Gll~g~~--------------------------- 98 (344)
.....++.++.+.+||++++++|++|++||+|+ ++|+++ |||+||+
T Consensus 116 g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp-~~La~a~~~~g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~~~l~ 194 (247)
T 3n7t_A 116 GALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGP-AMLPGIHDENGDSVIKDKTVTGFTTKGEIMIKVIDKMREDHLHTIA 194 (247)
T ss_dssp THHHHGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGGGCBCTTSSBTTTTCEECCCCHHHHHHTTCHHHHHHTTCCCHH
T ss_pred chhhhcccCHHHHHHHHHHHHcCCEEEEEChHH-HHHHHhhcccCCccccCceecCCCcHHHhhhhhhhhccccchhhHH
Confidence 555678899999999999999999999999999 599999 9999976
Q ss_pred -----------------------CCCEEcCCCCCcHHHHHHHHHHHHcC
Q 019238 99 -----------------------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (344)
Q Consensus 99 -----------------------dg~~iT~~g~~~~~~~~~~lv~~~~g 124 (344)
|||+|||+||.++++|++++|+++.+
T Consensus 195 ~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~ 243 (247)
T 3n7t_A 195 DMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEG 243 (247)
T ss_dssp HHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhh
Confidence 68999999999999999999999864
No 55
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.78 E-value=5.1e-20 Score=162.30 Aligned_cols=121 Identities=19% Similarity=0.240 Sum_probs=103.1
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCccee---c-------------------CCCCEEEcCccccccc--cC------CCc
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVD---A-------------------CHGVKIVADALVSNCR--DA------CGM 51 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~---~-------------------~~g~~~~~d~~~~~~~--~~------gG~ 51 (344)
|++.|+++|+++||+|+++|++++ ++. + +.|+.+.++..+++++ ++ ||+
T Consensus 30 E~~~p~~vl~~ag~~v~~~s~~g~-~~~d~~s~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~l~~v~~~~~D~livpGG~ 108 (243)
T 1rw7_A 30 EALHPFNTFRKEGFEVDFVSETGK-FGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGH 108 (243)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSSC-CCBCGGGGSTTTSCHHHHHHHHCTTSHHHHHHHTCBCGGGCCGGGEEEEEECCST
T ss_pred HHHHHHHHHHHCCCEEEEECCCCC-CCcCcccccccccChHHHHHHHhhhHHHHhhhccCCChHHCCHhhCcEEEECCCC
Confidence 788999999999999999999975 422 1 2366788888888764 22 776
Q ss_pred hhhhcccCChHHHHHHHHHhhCCCEEEEEchhHHHHHHHcC-------CCCCCC--------------------------
Q 019238 52 PGATNLKESEVLESIVKKQASDGRLYAAICVFLAVALGSWG-------LLKGLK-------------------------- 98 (344)
Q Consensus 52 ~~~~~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG-------ll~g~~-------------------------- 98 (344)
+.+..+..++.+.+||++++++|++|++||+|+ ++|+++| ||+||+
T Consensus 109 ~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~-~~La~ag~~~~g~~lL~G~~~T~~~~~~e~~~~~~~~~p~~~~~~l 187 (243)
T 1rw7_A 109 GTLFDYPKAKDLQDIASEIYANGGVVAAVCHGP-AIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILKAKNLATV 187 (243)
T ss_dssp THHHHGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTTSSBTTTTCEECCSCHHHHHHTTCHHHHHHTTCCCH
T ss_pred CchhhcccCHHHHHHHHHHHHcCCEEEEECCCH-HHHHhcCcccCCceeeCCcEEeecCCHHHhhccccccccccccccH
Confidence 666778889999999999999999999999999 5999999 999853
Q ss_pred ------------------------CCCEEcCCCCCcHHHHHHHHHHHHcC
Q 019238 99 ------------------------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (344)
Q Consensus 99 ------------------------dg~~iT~~g~~~~~~~~~~lv~~~~g 124 (344)
|||+|||+|+++++||++++|+++..
T Consensus 188 ~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~ 237 (243)
T 1rw7_A 188 EDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 (243)
T ss_dssp HHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC-
T ss_pred HHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhh
Confidence 67999999999999999999998754
No 56
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.76 E-value=1.2e-19 Score=163.82 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=105.0
Q ss_pred CeeehhHHHHHhCCCeEEEEEecCCcceec--------------CC---CCEEEcCcccccc-------ccC------CC
Q 019238 1 MEAVITIDVLRRSGADVVVASVEKQLRVDA--------------CH---GVKIVADALVSNC-------RDA------CG 50 (344)
Q Consensus 1 ~E~~~~~~~l~~~~~~~~~vs~~~~~~v~~--------------~~---g~~~~~d~~~~~~-------~~~------gG 50 (344)
+|++.|+++|+++||+|+++|++++ ++.. +. |+.+.++..++++ .++ ||
T Consensus 76 ~E~~~p~~vL~~ag~~v~i~S~~g~-~v~~d~~s~~~~~~~~~~~~~~~g~~l~~~~~l~~v~~~~~~~~~yD~livPGG 154 (291)
T 1n57_A 76 IETLLPLYHLHAAGFEFEVATISGL-MTKFEYWAMPHKDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGG 154 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSSC-CCCBCGGGCCTTCTTHHHHHHHHHHHHHSCEEHHHHHHTCCTTCSEEEEEECCS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCC-cccccccccccccHHHHHHHHhccceecCCccHHHHhhhccCcccCCEEEecCC
Confidence 3788999999999999999999974 5542 22 7788888888873 233 77
Q ss_pred chhhhcccCChHHHHHHHHHhhCCCEEEEEchhHHHHHHHcC----CCCCCC----------------------------
Q 019238 51 MPGATNLKESEVLESIVKKQASDGRLYAAICVFLAVALGSWG----LLKGLK---------------------------- 98 (344)
Q Consensus 51 ~~~~~~~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG----ll~g~~---------------------------- 98 (344)
++....+..++.+.+||++++++|++|++||+|+ ++|++++ ||+||+
T Consensus 155 ~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp-~~La~a~~~~GLL~Gr~~Tt~~~~~e~~~~~~~~~~~~~P~~le~ 233 (291)
T 1n57_A 155 HGALIGLPESQDVAAALQWAIKNDRFVISLCHGP-AAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWYFGE 233 (291)
T ss_dssp GGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGGGGTTSCCTTTTCEECCCCGGGGGTTTTTTSSSSCCSSCHHH
T ss_pred cchhhhhhhCHHHHHHHHHHHHcCCEEEEECccH-HHHHhhcccCccCCCCEEEeCCCHHHhhhccccccccccchhHHH
Confidence 5444478889999999999999999999999999 5899985 998865
Q ss_pred --------------------CCCEEcCCCCCcHHHHHHHHHHHHcChhH
Q 019238 99 --------------------DGKVVTTRGPGTPMEFVVALVEQLYGKGK 127 (344)
Q Consensus 99 --------------------dg~~iT~~g~~~~~~~~~~lv~~~~g~~~ 127 (344)
|||+|||+|+.+++||++++|+++.|+..
T Consensus 234 ~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~~ 282 (291)
T 1n57_A 234 ELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYA 282 (291)
T ss_dssp HHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCchh
Confidence 46899999999999999999999998653
No 57
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.74 E-value=3.2e-19 Score=156.11 Aligned_cols=136 Identities=26% Similarity=0.325 Sum_probs=107.9
Q ss_pred CeeehhHHHHHhCCCeEEEEEecCCc-ce---------ecCCCCEEEcC-------ccccccc--cC------CCchhhh
Q 019238 1 MEAVITIDVLRRSGADVVVASVEKQL-RV---------DACHGVKIVAD-------ALVSNCR--DA------CGMPGAT 55 (344)
Q Consensus 1 ~E~~~~~~~l~~~~~~~~~vs~~~~~-~v---------~~~~g~~~~~d-------~~~~~~~--~~------gG~~~~~ 55 (344)
+|++.|+++|+++||+|+++|++++. ++ ++++|+.+.++ ..+++++ ++ ||++...
T Consensus 25 ~E~~~p~~~l~~ag~~v~~~s~~g~~~~v~d~~s~~~~~~~~g~~i~~~~~~~~~~~~l~~~~~~~~D~livpGG~~~~~ 104 (232)
T 1vhq_A 25 HEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAK 104 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGGCCGGGCSEEEECCSTHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCCcccccccccchhhhhhhhHHHHHhhhcCCCCHHHcCcccCCEEEECCCcchHH
Confidence 37889999999999999999999642 13 78889988887 7777753 23 7755433
Q ss_pred c----------ccCChHHHHHHHHHhhCCCEEEEEchhHHHHHHHcCCCC-CCC--------------------------
Q 019238 56 N----------LKESEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLK-GLK-------------------------- 98 (344)
Q Consensus 56 ~----------~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~-g~~-------------------------- 98 (344)
. ++.++.+.+||++++++|++|++||+|+ ++|+++ |+ ||+
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~-~~La~a--L~~Gr~~Tth~~~~~~~~l~~~g~~~~~~~~~ 181 (232)
T 1vhq_A 105 NLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAP-AMLPKI--FDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVD 181 (232)
T ss_dssp TSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGG-GGHHHH--CSSCCEECCCSCHHHHHHHHHTTCEECCCCTT
T ss_pred HHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHH--hcCCCEEeccCCHHHHHHHHHcCCEEecCCCC
Confidence 2 2358999999999999999999999999 599999 78 887
Q ss_pred ----C--CCEEcCCCCCcHHHHHHHHHHHHcChhHHHHHhhcccccccCCCcc
Q 019238 99 ----D--GKVVTTRGPGTPMEFVVALVEQLYGKGKADEVSGARVMRANHGDEF 145 (344)
Q Consensus 99 ----d--g~~iT~~g~~~~~~~~~~lv~~~~g~~~a~~v~~~~~~~~~~~~~~ 145 (344)
| ||+|||+ ++||++++|+++.|++. .+++.+.|.++++++.
T Consensus 182 ~~~vd~dg~liTs~----~~d~al~lv~~~~G~~~--~~~~~~~~~~~~~~~~ 228 (232)
T 1vhq_A 182 DIVVDEDNKIVTTP----AYMLAQNIAEAASGIDK--LVSRVLVLAEEGGSHH 228 (232)
T ss_dssp CCEEETTTTEEEEC----GGGTCSSHHHHHHHHHH--HHHHHHHHHC------
T ss_pred ceEEecCCCEEECC----CHHHHHHHHHHHcCHHH--HHHHHHHhhhccCCcc
Confidence 3 9999996 88999999999999865 4778888888776653
No 58
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.68 E-value=8.4e-18 Score=147.28 Aligned_cols=121 Identities=15% Similarity=0.117 Sum_probs=97.8
Q ss_pred CeeehhHHHHHhCCCeEEEEEecCC----------cceecCCCCEEEcC-------ccccccc--cC------CCchhhh
Q 019238 1 MEAVITIDVLRRSGADVVVASVEKQ----------LRVDACHGVKIVAD-------ALVSNCR--DA------CGMPGAT 55 (344)
Q Consensus 1 ~E~~~~~~~l~~~~~~~~~vs~~~~----------~~v~~~~g~~~~~d-------~~~~~~~--~~------gG~~~~~ 55 (344)
+|++.|+++|+++|++|+++|++++ .+++++.|+.+.+| ..+++++ ++ ||++...
T Consensus 42 ~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~~~~g~~v~~s~g~~v~~d~~~~~~~~~l~dv~~~~~D~livPGG~~~~~ 121 (242)
T 3l3b_A 42 REAVLVMLELDRHNVNFKCFAPNKNQKQVVDHKKKESVGEVRNILVESARIARGSVYDIEQIRVEEFDMLVIPGGYGVAK 121 (242)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSBCSCEEETTTTEEESCCCBHHHHHHHHTTTCEEEGGGCCGGGCSEEEECCCHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCcccccccccCccccccCCeEEecchhccccCCChHHCCcccCCEEEEcCCcchhh
Confidence 3788999999999999999999864 25778889998888 6788764 23 7765543
Q ss_pred c-----------ccCChHHHHHHHHHhhCCCEEEEEchhHHHHHHHcC-CCCCCC-------------------------
Q 019238 56 N-----------LKESEVLESIVKKQASDGRLYAAICVFLAVALGSWG-LLKGLK------------------------- 98 (344)
Q Consensus 56 ~-----------~~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG-ll~g~~------------------------- 98 (344)
. ++.++.+.+||++++++|++|++||+|+ ++|+++| ||+||+
T Consensus 122 ~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~-~~La~ag~lL~Gr~~T~~~~~~~~l~~~Ga~~~~~~~~~ 200 (242)
T 3l3b_A 122 NFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISP-AVVVALLKDIAKVKVTIGEDSNGLIDKMGGVHVDCPTIK 200 (242)
T ss_dssp HHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHH-HHHHHHHTTTCCCEECCCC----CHHHHTCEECCCCTTC
T ss_pred hhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHhCcccCCCEEEecCChHHHHHHCCCEEEcCCCCe
Confidence 2 3568999999999999999999999999 5999999 999998
Q ss_pred ---C--CCEEcCCCCCcHHHHHHHHHHHHcChh
Q 019238 99 ---D--GKVVTTRGPGTPMEFVVALVEQLYGKG 126 (344)
Q Consensus 99 ---d--g~~iT~~g~~~~~~~~~~lv~~~~g~~ 126 (344)
| ||+|||+++.. +..+.|.+.|.+
T Consensus 201 vVvD~~g~liTs~a~~~----~~~~~e~~~g~~ 229 (242)
T 3l3b_A 201 SVKDDVNRIFSCSAYMR----NDSLYNVYLGIQ 229 (242)
T ss_dssp CEEETTTTEEEECGGGS----CCCHHHHHHHHH
T ss_pred EEEECCCCEEECcCccc----CCCHHHHHhCHH
Confidence 6 99999998753 344555555443
No 59
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.66 E-value=5.1e-16 Score=152.00 Aligned_cols=165 Identities=14% Similarity=0.140 Sum_probs=125.8
Q ss_pred ChhHHHHHhhccccc-ccCCCc-ceeeeccceeeec-----CCCCeEEEEeC--CCcchhHHHHHHHHHHhcCCeEEEEE
Q 019238 124 GKGKADEVSGARVMR-ANHGDE-FTIAEFNPVQWTF-----DNSPQILVPIA--NGSEEMEAVIIIDILRRAKANVVVAS 194 (344)
Q Consensus 124 g~~~a~~v~~~~~~~-~~~~~~-~~l~~~~~~~~~~-----~~~~~v~ill~--~g~~~~e~~~~~~~l~~~~~~v~~~s 194 (344)
..+.++.|++.+... |.+... +...+.+.+++.. ..++||+||+. +||++.|+..+.+.|+++|+++++++
T Consensus 486 d~~~~~~v~~~l~~~~p~~~~~~~~~~~~~~ls~~~~~~~~l~g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vVs 565 (688)
T 2iuf_A 486 SDNLATRVASAIGVEAPKPNSSFYHDNTTAHIGAFGEKLAKLDGLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVVA 565 (688)
T ss_dssp CHHHHHHHHTTTTCCCCCCCGGGCCCCCCTTCSSSSSCCSCCTTCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred CHHHHHHHHHHhCCCCCCCCccCCCCCCCcccccCcCCCCCCCCCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEEe
Confidence 567778888888653 222111 1112223333221 13589999999 99999999999999999999999999
Q ss_pred eCCCceeeeccceeeeeccccccccCCCccEEEEcCCccc----------------hHhhhcCHHHHHHHHHHHhcCCcE
Q 019238 195 VADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG----------------AQAFAKSKKLVNMLKKQKESNRPY 258 (344)
Q Consensus 195 ~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~----------------~~~l~~~~~l~~~l~~~~~~~k~I 258 (344)
++.+ . .+|.+++++++.+||+|+||||..+ ...|..++.+++||++++++||+|
T Consensus 566 ~~~g-~---------~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpI 635 (688)
T 2iuf_A 566 ERXA-N---------NVDETYSASDAVQFDAVVVADGAEGLFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTV 635 (688)
T ss_dssp SSCC-T---------TCCEESTTCCGGGCSEEEECTTCGGGCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEE
T ss_pred ccCC-c---------ccccchhcCCccccCeEEecCCCcccccccccccccccccchhhcccChHHHHHHHHHHHcCCEE
Confidence 9875 2 7888899988899999999999655 566889999999999999999999
Q ss_pred EEEcchhhhhhhhcCCCCCCeeeeCcCchhhhccCCcCCCcEEEeCCeEeCCCcccHHHHHHHHHHHh
Q 019238 259 GAICASPALVLEPHGLLKGKKATAFPAMCNKLSNQSEIENRVVVDGNLVTSRGPGTSMEFALAIVEKF 326 (344)
Q Consensus 259 ~aic~G~~~lLa~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~v~dg~liT~~g~~~~~~~~~~li~~l 326 (344)
++||+|+++ |..+|+.. .|+++||+.++ .-+|+..+++.+
T Consensus 636 aAIc~ap~v-L~~aGi~~-------------------------~d~GVvts~~~--~~~f~~~fi~~l 675 (688)
T 2iuf_A 636 GALGSGSDA-LESGQISS-------------------------ERQGVYTGKNA--GDAFAKDIKSGL 675 (688)
T ss_dssp EEEGGGHHH-HHHTTCCT-------------------------TSTTEEEESSS--SHHHHHHHHHHH
T ss_pred EEECchHHH-HHHcCCCC-------------------------CCCCEEEcCCc--cHHHHHHHHHHH
Confidence 999999876 99999853 35678887776 234555555544
No 60
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.61 E-value=3.8e-15 Score=145.44 Aligned_cols=141 Identities=14% Similarity=0.093 Sum_probs=110.9
Q ss_pred ChhHHHHHhhcccccc-cCCC-cceeeeccceeee-----cCCCCeEEEEeCCC-cchhHHHHHHHHHHhcCCeEEEEEe
Q 019238 124 GKGKADEVSGARVMRA-NHGD-EFTIAEFNPVQWT-----FDNSPQILVPIANG-SEEMEAVIIIDILRRAKANVVVASV 195 (344)
Q Consensus 124 g~~~a~~v~~~~~~~~-~~~~-~~~l~~~~~~~~~-----~~~~~~v~ill~~g-~~~~e~~~~~~~l~~~~~~v~~~s~ 195 (344)
..+.++.|++.+.... .+.. .....+.+.+++. ....+||+||+.+| |++.|+..+.+.|+++|++++++++
T Consensus 494 d~~~~~~va~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~l~grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVsp 573 (688)
T 3ej6_A 494 SNDVAKRVAVALGLEAPQPDPTYYHNNVTRGVSIFNESLPTIATLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIAE 573 (688)
T ss_dssp CHHHHHHHHHHHTSCCCSCCTTSCCCCCCSSCCSSSSCCSCCTTCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CHHHHHHHHHHhCCCCCCCCCCCCCCCCCcccccccCCCCCccCCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5566677777666542 2111 1112223333322 23568999999999 9999999999999999999999999
Q ss_pred CCCceeeeccceeeeeccccccccCCCccEEEEcCCccc-------hHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhh
Q 019238 196 ADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG-------AQAFAKSKKLVNMLKKQKESNRPYGAICASPALV 268 (344)
Q Consensus 196 ~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~-------~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~l 268 (344)
+.| .| +|.+++++++.+||+|+||||..+ ++.+..++.+++||+++++++|+|++||+|+++
T Consensus 574 ~~g------~G----vD~t~~~~~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~l- 642 (688)
T 3ej6_A 574 YLA------SG----VDQTYSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKA- 642 (688)
T ss_dssp SCC------TT----CCEETTTCCGGGCSEEEECTTCCTTTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHH-
T ss_pred CCC------CC----cccCcccCChhcCcEEEECCCcccccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHH-
Confidence 875 24 788999998899999999999654 256888999999999999999999999999876
Q ss_pred hhhcCCC
Q 019238 269 LEPHGLL 275 (344)
Q Consensus 269 La~aGlL 275 (344)
|..+|+-
T Consensus 643 L~~AGI~ 649 (688)
T 3ej6_A 643 LQSIGVE 649 (688)
T ss_dssp HHHTTCC
T ss_pred HHHcCCC
Confidence 9999984
No 61
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.55 E-value=7.7e-15 Score=145.46 Aligned_cols=121 Identities=12% Similarity=0.044 Sum_probs=105.0
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccc--cC------CCchhhhcccCChHHHHHHHHHhhC
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCR--DA------CGMPGATNLKESEVLESIVKKQASD 73 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~--~~------gG~~~~~~~~~~~~~~~~l~~~~~~ 73 (344)
|+..|+++|+++|++++++|+++ .+|+++.|+.+.+|..+++++ ++ ||..+...+..++.+++||++++++
T Consensus 549 El~~p~dvL~~AG~~V~ivS~~g-g~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~~~~l~~~~~l~~~Lr~~~~~ 627 (715)
T 1sy7_A 549 AYDAAYAAISANQAIPLVIGPRR-SKVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAETLSKNGRALHWIREAFGH 627 (715)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCS-SCEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCEEEEEECCC-CceecCCCceEecccccccCCcccCCEEEEcCCcccHhhhccCHHHHHHHHHHHhC
Confidence 67899999999999999999996 489999999999999998864 22 7755677788899999999999999
Q ss_pred CCEEEEEchhHHHHHHHc-CCCCCCC--------CCCEEcCCCCC------------cHHHHHHHHHHHHcC
Q 019238 74 GRLYAAICVFLAVALGSW-GLLKGLK--------DGKVVTTRGPG------------TPMEFVVALVEQLYG 124 (344)
Q Consensus 74 g~~i~aiC~g~~~~La~a-Gll~g~~--------dg~~iT~~g~~------------~~~~~~~~lv~~~~g 124 (344)
||+|++||+|+ ++|+++ ||.+-+. |||+|||+|+. +..+|+..+++.+..
T Consensus 628 gK~IaAIC~G~-~lLA~AlGL~~L~~aGa~~VVvDg~lITs~gp~~~~l~~~~~i~~s~~~fa~~fi~~L~~ 698 (715)
T 1sy7_A 628 LKAIGATGEAV-DLVAKAIALPQVTVSSEAEVHESYGVVTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIAQ 698 (715)
T ss_dssp TCEEEEETTHH-HHHHHHHCCTTSCCCCSSSCEEETTEEEESSCCTTTTTSCCCCSTTCSSHHHHHHHHHHT
T ss_pred CCEEEEECHHH-HHHHHccCcHhHHhcCCCcEEEeCCEEECCCCcccccccccccccCHHHHHHHHHHHHHc
Confidence 99999999999 599999 9955332 99999999996 667788888888764
No 62
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.32 E-value=3.5e-12 Score=125.40 Aligned_cols=115 Identities=10% Similarity=0.109 Sum_probs=94.2
Q ss_pred CeeehhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCcccccccc--C------CCchhhhcccCChHHHHHHHHHhh
Q 019238 1 MEAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD--A------CGMPGATNLKESEVLESIVKKQAS 72 (344)
Q Consensus 1 ~E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~--~------gG~~~~~~~~~~~~~~~~l~~~~~ 72 (344)
+|++.|+++|+++|++|+++|+++ .+|++++|+.+.+|..+++++. + || +...++.++.++.||+++++
T Consensus 614 ~El~~pvdaLr~AG~~V~vVS~~~-g~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG--g~~~Lr~d~~vl~~Vre~~~ 690 (753)
T 3ttv_A 614 ADLLAILKALKAKGVHAKLLYSRM-GEVTADDGTVLPIAATFAGAPSLTVDAVIVPCG--NIADIADNGDANYYLMEAYK 690 (753)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSS-SEEECTTSCEEECCEETTTSCGGGCSEEEECCS--CGGGTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEcCC-CeEEeCCCCEEecccchhhCCCcCCCEEEECCC--ChHHhhhCHHHHHHHHHHHh
Confidence 378899999999999999999996 4899999999999999998863 2 66 67788999999999999999
Q ss_pred CCCEEEEEchhHHHHHHHcCCCCCCCCCCEEcCCCCCcHHHHHHHHHHHH
Q 019238 73 DGRLYAAICVFLAVALGSWGLLKGLKDGKVVTTRGPGTPMEFVVALVEQL 122 (344)
Q Consensus 73 ~g~~i~aiC~g~~~~La~aGll~g~~dg~~iT~~g~~~~~~~~~~lv~~~ 122 (344)
++|+|++||+|++ +|+++||-+ ..|..++++.... -+++-.+++.+
T Consensus 691 ~gKpIAAIC~Gp~-lLa~AGL~~-~~~~g~~~~~~~~--~~~~~~~~~~~ 736 (753)
T 3ttv_A 691 HLKPIALAGDARK-FKATIKIAD-QGEEGIVEADSAD--GSFMDELLTLM 736 (753)
T ss_dssp TTCCEEEEGGGGG-GGGGGTCCT-TCBTTEEEESSCC--HHHHHHHHHHH
T ss_pred cCCeEEEECchHH-HHHHcCCCC-CCCCcEEEcCcch--HHHHHHHHHHH
Confidence 9999999999995 999999843 2355677765442 23444555544
No 63
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.07 E-value=3.4e-10 Score=111.09 Aligned_cols=107 Identities=21% Similarity=0.107 Sum_probs=87.5
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCcccccccc--C------CCchh----------------hhcc
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD--A------CGMPG----------------ATNL 57 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~--~------gG~~~----------------~~~~ 57 (344)
|+..+.+.|+++|+++.+||+..+. .+|.++++++. + ||..+ ...|
T Consensus 546 E~~~~~~~L~~aG~~V~vVs~~~g~----------~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~L 615 (688)
T 2iuf_A 546 QGAKLQVALSSVGVDVVVVAERXAN----------NVDETYSASDAVQFDAVVVADGAEGLFGADSFTVEPSAGSGASTL 615 (688)
T ss_dssp HHHHHHHHHGGGTCEEEEEESSCCT----------TCCEESTTCCGGGCSEEEECTTCGGGCCTTTTTCCCCTTSCCCSS
T ss_pred HHHHHHHHHHHCCCEEEEEeccCCc----------ccccchhcCCccccCeEEecCCCcccccccccccccccccchhhc
Confidence 7789999999999999999997531 77777777642 2 77666 7789
Q ss_pred cCChHHHHHHHHHhhCCCEEEEEchhHHHHHHHcCCCCCCCCCCEEcCCCCCcHHHHHHHHHHHHc
Q 019238 58 KESEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLKGLKDGKVVTTRGPGTPMEFVVALVEQLY 123 (344)
Q Consensus 58 ~~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~dg~~iT~~g~~~~~~~~~~lv~~~~ 123 (344)
+.++.+++||+++++.||+|++||+|++ +|.++|+.. .|.++||++.+ .-+++-.+++.+.
T Consensus 616 ~~~~~~~~~v~~~~~~gKpIaAIc~ap~-vL~~aGi~~--~d~GVvts~~~--~~~f~~~fi~~la 676 (688)
T 2iuf_A 616 YPAGRPLNILLDAFRFGKTVGALGSGSD-ALESGQISS--ERQGVYTGKNA--GDAFAKDIKSGLS 676 (688)
T ss_dssp SCTTHHHHHHHHHHHHTCEEEEEGGGHH-HHHHTTCCT--TSTTEEEESSS--SHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHcCCEEEEECchHH-HHHHcCCCC--CCCCEEEcCCc--cHHHHHHHHHHHH
Confidence 9999999999999999999999999996 999999953 47899999888 2345556655543
No 64
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.07 E-value=1.9e-10 Score=98.79 Aligned_cols=95 Identities=26% Similarity=0.360 Sum_probs=74.4
Q ss_pred CCCeEEEEeCCCcch-hHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 159 NSPQILVPIANGSEE-MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 159 ~~~~v~ill~~g~~~-~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
+++||+|+.++++.. .+ +.+.|+++|+++.+++.. ++. .++|.|+||||......
T Consensus 1 m~~~i~il~~~~~~~~~~---~~~~l~~~g~~~~~~~~~-------------------~~~--~~~d~lil~Gg~~~~~~ 56 (213)
T 3d54_D 1 MKPRACVVVYPGSNCDRD---AYHALEINGFEPSYVGLD-------------------DKL--DDYELIILPGGFSYGDY 56 (213)
T ss_dssp CCCEEEEECCTTEEEHHH---HHHHHHTTTCEEEEECTT-------------------CCC--SSCSEEEECEECGGGGC
T ss_pred CCcEEEEEEcCCCCccHH---HHHHHHHCCCEEEEEecC-------------------CCc--ccCCEEEECCCCchhhh
Confidence 368999999999874 44 489999999988877532 122 67999999998542222
Q ss_pred -----hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCC
Q 019238 238 -----FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGK 278 (344)
Q Consensus 238 -----l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~ 278 (344)
+..++.+.+||+++.+++++|.+||.|..+ |+.+|+|.|+
T Consensus 57 ~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~ql-La~aGll~g~ 101 (213)
T 3d54_D 57 LRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQI-LIEMGLLKGA 101 (213)
T ss_dssp SSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHH-HHHHTSSCSE
T ss_pred hccccccccHHHHHHHHHHHHCCCEEEEECHHHHH-HHHcCCCCCC
Confidence 234567899999999999999999999755 9999999884
No 65
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=98.80 E-value=1.8e-08 Score=98.69 Aligned_cols=90 Identities=22% Similarity=0.162 Sum_probs=74.3
Q ss_pred eeehhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCcccccccc--C------CCchh-------hhcccCChHHHHH
Q 019238 2 EAVITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRD--A------CGMPG-------ATNLKESEVLESI 66 (344)
Q Consensus 2 E~~~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~--~------gG~~~-------~~~~~~~~~~~~~ 66 (344)
|+..|.+.|+++|+++++||++.+ .| +|.++++++. + ||..+ ...|+.++.++.|
T Consensus 553 El~~p~~aL~~aGa~V~vVsp~~g------~G----vD~t~~~~~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~f 622 (688)
T 3ej6_A 553 KAKALKEQLEKDGLKVTVIAEYLA------SG----VDQTYSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAGRPSQI 622 (688)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCC------TT----CCEETTTCCGGGCSEEEECTTCCTTTSTTTTCCTTSCTTHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCC------CC----cccCcccCChhcCcEEEECCCcccccccccchhhhccCHHHHHH
Confidence 678899999999999999999864 34 7888887753 2 77544 2678899999999
Q ss_pred HHHHhhCCCEEEEEchhHHHHHHHcCCCCCCCCCCEEc
Q 019238 67 VKKQASDGRLYAAICVFLAVALGSWGLLKGLKDGKVVT 104 (344)
Q Consensus 67 l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~dg~~iT 104 (344)
|+++++.+|+|++||+|++ +|.++|+-. .|..+++
T Consensus 623 V~e~~~hgKpIAAIchgp~-lL~~AGI~~--~~~g~~~ 657 (688)
T 3ej6_A 623 LTDGYRWGKPVAAVGSAKK-ALQSIGVEE--KEAGVYA 657 (688)
T ss_dssp HHHHHHTTCCEEEEGGGHH-HHHHTTCCS--SSTTEEE
T ss_pred HHHHHHcCCEEEEeCccHH-HHHHcCCCC--CCCeEEe
Confidence 9999999999999999996 999999842 2446676
No 66
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=98.27 E-value=1.6e-06 Score=74.44 Aligned_cols=86 Identities=22% Similarity=0.276 Sum_probs=61.6
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH-hh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ-AF 238 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~-~l 238 (344)
.++|+|+.+++. +....+.|+++|+++.+++.. ++. .++|.|++|||..... .+
T Consensus 23 ~~~I~il~~~~~----~~~~~~~l~~~G~~~~~~~~~-------------------~~l--~~~Dglil~GG~~~~~~~~ 77 (219)
T 1q7r_A 23 NMKIGVLGLQGA----VREHVRAIEACGAEAVIVKKS-------------------EQL--EGLDGLVLPGGESTTMRRL 77 (219)
T ss_dssp CCEEEEESCGGG----CHHHHHHHHHTTCEEEEECSG-------------------GGG--TTCSEEEECCCCHHHHHHH
T ss_pred CCEEEEEeCCCC----cHHHHHHHHHCCCEEEEECCH-------------------HHH--hhCCEEEECCCChHHHHHH
Confidence 478999976542 223468889999888766531 123 5799999999964322 23
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
..+..+.++|+++.++++||.+||.|..+ |+.
T Consensus 78 ~~~~~~~~~i~~~~~~~~PilGIC~G~Ql-L~~ 109 (219)
T 1q7r_A 78 IDRYGLMEPLKQFAAAGKPMFGTCAGLIL-LAK 109 (219)
T ss_dssp HHHTTCHHHHHHHHHTTCCEEEETTHHHH-HEE
T ss_pred hhhhHHHHHHHHHHHcCCeEEEECHHHHH-HHH
Confidence 33455679999999999999999999876 765
No 67
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=98.24 E-value=2.6e-06 Score=71.79 Aligned_cols=86 Identities=20% Similarity=0.245 Sum_probs=59.9
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH-hh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ-AF 238 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~-~l 238 (344)
|+||+|+-+.+ ...+ ..+.|+++|+++.+++.. ++. .++|.|++|||..... .+
T Consensus 1 ~m~I~il~~~~-~~~~---~~~~l~~~g~~~~~~~~~-------------------~~l--~~~d~iil~GG~~~~~~~~ 55 (196)
T 2nv0_A 1 MLTIGVLGLQG-AVRE---HIHAIEACGAAGLVVKRP-------------------EQL--NEVDGLILPGGESTTMRRL 55 (196)
T ss_dssp CCEEEEECSSS-CCHH---HHHHHHHTTCEEEEECSG-------------------GGG--GGCSEEEECCSCHHHHHHH
T ss_pred CcEEEEEEccC-CcHH---HHHHHHHCCCEEEEeCCh-------------------HHH--hhCCEEEECCCChhhHHHH
Confidence 47899986532 2222 358889999887765421 123 5789999999964332 23
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
..+..+.++|+++.+++++|.+||.|..+ |+.
T Consensus 56 ~~~~~~~~~i~~~~~~~~pilgIC~G~q~-l~~ 87 (196)
T 2nv0_A 56 IDTYQFMEPLREFAAQGKPMFGTCAGLII-LAK 87 (196)
T ss_dssp HHHTTCHHHHHHHHHTTCCEEEETHHHHH-HSB
T ss_pred hhhHHHHHHHHHHHHCCCcEEEECHHHHH-HHH
Confidence 33445689999999999999999999866 765
No 68
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=98.14 E-value=4.7e-06 Score=70.96 Aligned_cols=88 Identities=19% Similarity=0.260 Sum_probs=61.6
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH-h
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ-A 237 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~-~ 237 (344)
..+||+|+-+++ .+....+.|++.|+++.+++.. ++. .++|.|++|||..... .
T Consensus 19 ~~~~I~ii~~~~----~~~~~~~~l~~~g~~~~~~~~~-------------------~~l--~~~d~iil~GG~~~~~~~ 73 (208)
T 2iss_D 19 SHMKIGVLGVQG----DVREHVEALHKLGVETLIVKLP-------------------EQL--DMVDGLILPGGESTTMIR 73 (208)
T ss_dssp -CCEEEEECSSS----CHHHHHHHHHHTTCEEEEECSG-------------------GGG--GGCSEEEECSSCHHHHHH
T ss_pred CCcEEEEEECCC----chHHHHHHHHHCCCEEEEeCCh-------------------HHH--hhCCEEEECCCcHHHHHh
Confidence 457999996633 4555778888888887765421 123 4689999999953221 1
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
+..+..+.++|+++.+++++|.+||.|..+ |+.+
T Consensus 74 ~~~~~~~~~~i~~~~~~g~PilGIC~G~Ql-L~~~ 107 (208)
T 2iss_D 74 ILKEMDMDEKLVERINNGLPVFATCAGVIL-LAKR 107 (208)
T ss_dssp HHHHTTCHHHHHHHHHTTCCEEEETHHHHH-HEEE
T ss_pred hhhhhhHHHHHHHHHHCCCeEEEECHHHHH-HHHH
Confidence 222344689999999999999999999776 7654
No 69
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.07 E-value=6.9e-06 Score=68.77 Aligned_cols=87 Identities=15% Similarity=0.181 Sum_probs=62.4
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCcc-chHhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLG-GAQAF 238 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~-~~~~l 238 (344)
+++|+|+..++ .+....+.|++.|+++.+++.. ++. +++|.|++|||.. ....+
T Consensus 2 ~p~Igi~~~~~----~~~~~~~~l~~~G~~~~~~~~~-------------------~~l--~~~dglil~GG~~~~~~~~ 56 (191)
T 2ywd_A 2 RGVVGVLALQG----DFREHKEALKRLGIEAKEVRKK-------------------EHL--EGLKALIVPGGESTTIGKL 56 (191)
T ss_dssp -CCEEEECSSS----CHHHHHHHHHTTTCCCEEECSG-------------------GGG--TTCSEEEECSSCHHHHHHH
T ss_pred CcEEEEEecCC----chHHHHHHHHHCCCEEEEeCCh-------------------hhh--ccCCEEEECCCChhhhHHh
Confidence 47899998764 3455788999999877665321 123 5689999999942 22333
Q ss_pred hcCHHHHHHHHHHHhcC-CcEEEEcchhhhhhhhc
Q 019238 239 AKSKKLVNMLKKQKESN-RPYGAICASPALVLEPH 272 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~-k~I~aic~G~~~lLa~a 272 (344)
..+..+.++|+++.+++ +||.+||.|..+ |+.+
T Consensus 57 ~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~-l~~~ 90 (191)
T 2ywd_A 57 AREYGIEDEVRKRVEEGSLALFGTCAGAIW-LAKE 90 (191)
T ss_dssp HHHTTHHHHHHHHHHTTCCEEEEETHHHHH-HEEE
T ss_pred hhhhhHHHHHHHHHHCCCCeEEEECHHHHH-HHHH
Confidence 32456789999999999 999999999766 7654
No 70
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=98.07 E-value=1.2e-05 Score=67.97 Aligned_cols=88 Identities=23% Similarity=0.207 Sum_probs=59.9
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh-
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF- 238 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l- 238 (344)
++||+|+-+. + ..+..+.+.|++.|+++.+++.. ++. .++|.|++||+.......
T Consensus 2 ~~~I~iid~~-~--~~~~~~~~~l~~~G~~~~~~~~~-------------------~~l--~~~d~lil~G~g~~~~~~~ 57 (200)
T 1ka9_H 2 RMKALLIDYG-S--GNLRSAAKALEAAGFSVAVAQDP-------------------KAH--EEADLLVLPGQGHFGQVMR 57 (200)
T ss_dssp -CEEEEECSS-C--SCHHHHHHHHHHTTCEEEEESST-------------------TSC--SSCSEEEECCCSCHHHHHH
T ss_pred ccEEEEEeCC-C--ccHHHHHHHHHHCCCeEEEecCh-------------------HHc--ccCCEEEECCCCcHHHHHH
Confidence 4789888443 2 22234589999999888766421 122 578999999942211111
Q ss_pred -hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 239 -AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 239 -~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
..+..+.++|+++.++++||.+||.|..+ |+.+
T Consensus 58 ~l~~~~~~~~i~~~~~~~~PilGIC~G~Ql-l~~~ 91 (200)
T 1ka9_H 58 AFQESGFVERVRRHLERGLPFLGICVGMQV-LYEG 91 (200)
T ss_dssp TTSSSCTHHHHHHHHHTTCCEEECTHHHHT-TSSE
T ss_pred HHHhcCHHHHHHHHHHcCCeEEEEcHHHHH-HHHh
Confidence 12245789999999999999999999766 8877
No 71
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=97.98 E-value=3.4e-05 Score=66.91 Aligned_cols=94 Identities=16% Similarity=0.219 Sum_probs=66.7
Q ss_pred CeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhc
Q 019238 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (344)
Q Consensus 161 ~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~ 240 (344)
|||.++..+.++... .+.+.++..|++++++....+.+ + | ++. .+||+|||+||..++.....
T Consensus 1 m~i~vi~h~~~e~~g--~~~~~l~~~g~~~~~~~~~~~~~--------~-p----~~~--~~~d~lii~GGp~~~~~~~~ 63 (236)
T 3l7n_A 1 MRIHFILHETFEAPG--AYLAWAALRGHDVSMTKVYRYEK--------L-P----KDI--DDFDMLILMGGPQSPSSTKK 63 (236)
T ss_dssp CEEEEEECCTTSCCH--HHHHHHHHTTCEEEEEEGGGTCC--------C-C----SCG--GGCSEEEECCCSSCTTCCTT
T ss_pred CeEEEEeCCCCCCch--HHHHHHHHCCCeEEEEeeeCCCC--------C-C----CCc--cccCEEEECCCCCCcccccc
Confidence 588888877776554 44577888999999888755311 1 1 122 57999999999654322111
Q ss_pred C------HHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 241 S------KKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 241 ~------~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
+ ....++|+++.+++++|.+||-|..+ |+.+
T Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~Ql-L~~~ 100 (236)
T 3l7n_A 64 EFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQL-MGVA 100 (236)
T ss_dssp TCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHH-HHHH
T ss_pred cCcccchHHHHHHHHHHHHcCCCEEEEchHHHH-HHHH
Confidence 1 34789999999999999999999776 7654
No 72
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=97.95 E-value=2.6e-05 Score=68.14 Aligned_cols=95 Identities=15% Similarity=0.130 Sum_probs=67.1
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh-h
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA-F 238 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~-l 238 (344)
+|+|.|+..+.+..... +.+.|++.|++++++....+.+. ..+. .+||.|||+||...... .
T Consensus 3 ~~~vliiqh~~~e~~~~--i~~~l~~~G~~v~v~~~~~~~~~-------------p~~~--~~~d~lIl~GGp~~~~d~~ 65 (250)
T 3m3p_A 3 LKPVMIIQFSASEGPGH--FGDFLAGEHIPFQVLRMDRSDPL-------------PAEI--RDCSGLAMMGGPMSANDDL 65 (250)
T ss_dssp CCCEEEEESSSSCCCHH--HHHHHHHTTCCEEEEEGGGTCCC-------------CSCG--GGSSEEEECCCSSCTTSCC
T ss_pred CCeEEEEECCCCCCHHH--HHHHHHHCCCeEEEEeccCCCcC-------------cCcc--ccCCEEEECCCCCcccccc
Confidence 47898888777665554 45678999999998877543110 1123 57999999999543221 1
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
.......++|+++.+.+++|.+||-|..+ |+.+
T Consensus 66 ~~~~~~~~~i~~~~~~~~PvlGIC~G~Ql-l~~~ 98 (250)
T 3m3p_A 66 PWMPTLLALIRDAVAQRVPVIGHCLGGQL-LAKA 98 (250)
T ss_dssp TTHHHHHHHHHHHHHHTCCEEEETHHHHH-HHHH
T ss_pred hHHHHHHHHHHHHHHcCCCEEEECHHHHH-HHHH
Confidence 12245789999999999999999999776 6654
No 73
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=97.78 E-value=7.5e-05 Score=62.34 Aligned_cols=85 Identities=19% Similarity=0.248 Sum_probs=59.5
Q ss_pred EEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhcCH
Q 019238 163 ILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSK 242 (344)
Q Consensus 163 v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~ 242 (344)
|+|+=+.+.. ...+.+.|+++|+++.++.... .+++....++|.|++|||. .+. +..
T Consensus 3 i~iid~~~~~---~~~~~~~l~~~G~~~~~~~~~~----------------~~~~~~~~~~dglil~Gg~-~~~---~~~ 59 (189)
T 1wl8_A 3 IVIMDNGGQY---VHRIWRTLRYLGVETKIIPNTT----------------PLEEIKAMNPKGIIFSGGP-SLE---NTG 59 (189)
T ss_dssp EEEEECSCTT---HHHHHHHHHHTTCEEEEEETTC----------------CHHHHHHTCCSEEEECCCS-CTT---CCT
T ss_pred EEEEECCCch---HHHHHHHHHHCCCeEEEEECCC----------------ChHHhcccCCCEEEECCCC-Chh---hhh
Confidence 6666554333 3467888999999888776532 1233322469999999995 332 245
Q ss_pred HHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 243 KLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 243 ~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
...++|+++.+++++|.+||.|..+ |+.
T Consensus 60 ~~~~~i~~~~~~~~PilGIC~G~Q~-l~~ 87 (189)
T 1wl8_A 60 NCEKVLEHYDEFNVPILGICLGHQL-IAK 87 (189)
T ss_dssp THHHHHHTGGGTCSCEEEETHHHHH-HHH
T ss_pred hHHHHHHHHhhCCCeEEEEcHHHHH-HHH
Confidence 5688998777899999999999876 654
No 74
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=97.77 E-value=0.0001 Score=77.88 Aligned_cols=101 Identities=14% Similarity=0.221 Sum_probs=72.8
Q ss_pred CCCeEEEEeCCCcch-hHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH-
Q 019238 159 NSPQILVPIANGSEE-MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ- 236 (344)
Q Consensus 159 ~~~~v~ill~~g~~~-~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~- 236 (344)
.++||+|+.++|..- .| +...|+.+|++..++..+. +.. .-.++ .+||.|++|||....+
T Consensus 1046 ~~pkVaIi~~~G~N~~~~---~~~A~~~aG~~~~~v~~~d-----------l~~--~~~~l--~~~d~lvlPGGfSygD~ 1107 (1303)
T 3ugj_A 1046 ARPKVAVLREQGVNSHVE---MAAAFHRAGFDAIDVHMSD-----------LLG--GRIGL--GNFHALVACGGFSYGDV 1107 (1303)
T ss_dssp CCCEEEEEECTTCCCHHH---HHHHHHHTTCEEEEEEHHH-----------HHT--TSCCG--GGCSEEEECCSCGGGGT
T ss_pred CCCEEEEEecCCcCCHHH---HHHHHHHhCCceEEEeecc-----------ccc--CcccH--hhCCEEEECCCCcchhh
Confidence 467999999998864 66 4457778899887765321 000 01223 6789999999953222
Q ss_pred ---------hhhcCHHHHHHHHHHH-hcCCcEEEEcchhhhhhhhc-CCCCCC
Q 019238 237 ---------AFAKSKKLVNMLKKQK-ESNRPYGAICASPALVLEPH-GLLKGK 278 (344)
Q Consensus 237 ---------~l~~~~~l~~~l~~~~-~~~k~I~aic~G~~~lLa~a-GlL~g~ 278 (344)
....++.+.+.+++++ ++++++.+||+|..+ |.++ |||.|.
T Consensus 1108 l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~Ql-L~e~~gllPg~ 1159 (1303)
T 3ugj_A 1108 LGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQM-MSNLRELIPGS 1159 (1303)
T ss_dssp TSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHH-HHTTGGGSTTC
T ss_pred hccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHH-HHHhcCcCCCC
Confidence 2345677888899876 689999999999877 8888 999986
No 75
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=97.76 E-value=1.7e-05 Score=67.60 Aligned_cols=76 Identities=21% Similarity=0.255 Sum_probs=53.3
Q ss_pred hhHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccccC---CCchhhhc-----ccCChHHHHHHHHHhhCCCE
Q 019238 5 ITIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGATN-----LKESEVLESIVKKQASDGRL 76 (344)
Q Consensus 5 ~~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~---gG~~~~~~-----~~~~~~~~~~l~~~~~~g~~ 76 (344)
.+.+.|+++|+++.+++... .+++.+-. ||...... +..++.+.+||+++.+++++
T Consensus 18 ~~~~~l~~~g~~~~~~~~~~----------------~~~~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p 81 (213)
T 3d54_D 18 DAYHALEINGFEPSYVGLDD----------------KLDDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKL 81 (213)
T ss_dssp HHHHHHHTTTCEEEEECTTC----------------CCSSCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCE
T ss_pred HHHHHHHHCCCEEEEEecCC----------------CcccCCEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCE
Confidence 45788999999999887541 11122111 44221221 12356789999999999999
Q ss_pred EEEEchhHHHHHHHcCCCCCC
Q 019238 77 YAAICVFLAVALGSWGLLKGL 97 (344)
Q Consensus 77 i~aiC~g~~~~La~aGll~g~ 97 (344)
|.+||.|. .+|+.+|+|+|+
T Consensus 82 ilgIC~G~-qlLa~aGll~g~ 101 (213)
T 3d54_D 82 IMGICNGF-QILIEMGLLKGA 101 (213)
T ss_dssp EEECHHHH-HHHHHHTSSCSE
T ss_pred EEEECHHH-HHHHHcCCCCCC
Confidence 99999999 599999999763
No 76
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=97.74 E-value=6.2e-05 Score=64.80 Aligned_cols=87 Identities=21% Similarity=0.205 Sum_probs=59.5
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhc---CCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRA---KANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~---~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
.++|+|+.+++.. ....+.|+++ |.++..++. .++. .++|.||+|||.....
T Consensus 3 ~~~I~Il~~~~~~----~~~~~~l~~~~~~G~~~~~~~~-------------------~~~l--~~~dglil~GG~~~~~ 57 (227)
T 2abw_A 3 EITIGVLSLQGDF----EPHINHFIKLQIPSLNIIQVRN-------------------VHDL--GLCDGLVIPGGESTTV 57 (227)
T ss_dssp CEEEEEECTTSCC----HHHHHHHHTTCCTTEEEEEECS-------------------HHHH--HTCSEEEECCSCHHHH
T ss_pred CcEEEEEeCCCCc----HHHHHHHHHhccCCeEEEEEcC-------------------cccc--ccCCEEEECCCcHHHH
Confidence 3689999877432 2357788887 655544321 1233 4689999999953222
Q ss_pred -hhhcC--HHHHHHHHHHHhc-CCcEEEEcchhhhhhhhc
Q 019238 237 -AFAKS--KKLVNMLKKQKES-NRPYGAICASPALVLEPH 272 (344)
Q Consensus 237 -~l~~~--~~l~~~l~~~~~~-~k~I~aic~G~~~lLa~a 272 (344)
.+..+ ..+.++|+++.++ ++||.+||.|..+ |+.+
T Consensus 58 ~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~Ql-L~~~ 96 (227)
T 2abw_A 58 RRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCIL-LSKN 96 (227)
T ss_dssp HHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHH-TEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHH-HHHH
Confidence 22232 5689999999999 9999999999765 7754
No 77
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=97.70 E-value=8.3e-05 Score=62.45 Aligned_cols=90 Identities=13% Similarity=0.131 Sum_probs=58.2
Q ss_pred EEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhcCH
Q 019238 163 ILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSK 242 (344)
Q Consensus 163 v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~ 242 (344)
|+|+=..+.. . ..+.+.|++.|+++.++..+.. .++++...+||.|+++||........+.+
T Consensus 4 i~iid~~~s~--~-~~~~~~l~~~G~~~~v~~~~~~---------------~~~~~~~~~~dglil~gG~~~~~~~~~~~ 65 (195)
T 1qdl_B 4 TLIIDNYDSF--V-YNIAQIVGELGSYPIVIRNDEI---------------SIKGIERIDPDRLIISPGPGTPEKREDIG 65 (195)
T ss_dssp EEEEECSCSS--H-HHHHHHHHHTTCEEEEEETTTS---------------CHHHHHHHCCSEEEECCCSSCTTSHHHHT
T ss_pred EEEEECCCch--H-HHHHHHHHhCCCEEEEEeCCCC---------------CHHHHhhCCCCEEEECCCCCChhhhhhhh
Confidence 6666533322 2 4678899999999887765421 13333223699999988754333222223
Q ss_pred HHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 243 KLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 243 ~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
...++|+++ +.++||.+||.|..+ |+.+
T Consensus 66 ~~~~~i~~~-~~~~PvLGIC~G~Ql-L~~~ 93 (195)
T 1qdl_B 66 VSLDVIKYL-GKRTPILGVCLGHQA-IGYA 93 (195)
T ss_dssp THHHHHHHH-TTTSCEEEETHHHHH-HHHH
T ss_pred HHHHHHHHh-cCCCcEEEEehHHHH-HHHH
Confidence 456888875 789999999999876 7654
No 78
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=97.61 E-value=6e-05 Score=64.07 Aligned_cols=88 Identities=17% Similarity=0.175 Sum_probs=55.7
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
|++||+|+=|- . .-+..+...|++.|++++++.. .+++ .++|.||+||+-. ....
T Consensus 1 M~~~I~iiD~g-~--~n~~si~~al~~~G~~~~v~~~-------------------~~~l--~~~D~lilPG~g~-~~~~ 55 (211)
T 4gud_A 1 MTQNVVIIDTG-C--ANISSVKFAIERLGYAVTISRD-------------------PQVV--LAADKLFLPGVGT-ASEA 55 (211)
T ss_dssp --CCEEEECCC-C--TTHHHHHHHHHHTTCCEEEECC-------------------HHHH--HHCSEEEECCCSC-HHHH
T ss_pred CCCEEEEEECC-C--ChHHHHHHHHHHCCCEEEEECC-------------------HHHH--hCCCEEEECCCCC-HHHH
Confidence 34688877443 2 2345577889999988875321 1333 4679999999632 3222
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
...-...++++...+.++||.+||.|..+ |+.+
T Consensus 56 ~~~~~~~~~i~~~~~~~~PvlGIClG~Ql-L~~~ 88 (211)
T 4gud_A 56 MKNLTERDLIELVKRVEKPLLGICLGMQL-LGKL 88 (211)
T ss_dssp HHHHHHTTCHHHHHHCCSCEEEETHHHHT-TSSE
T ss_pred HHHHHhcChHHHHHHcCCCEEEEchhHhH-HHHH
Confidence 22222334567777889999999999765 7653
No 79
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=97.48 E-value=0.00037 Score=58.66 Aligned_cols=86 Identities=17% Similarity=0.250 Sum_probs=55.7
Q ss_pred CeEEEEeCCCcchhHHHHHHHHHHhcC-----CeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccch
Q 019238 161 PQILVPIANGSEEMEAVIIIDILRRAK-----ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (344)
Q Consensus 161 ~~v~ill~~g~~~~e~~~~~~~l~~~~-----~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~ 235 (344)
|||+|+-++.-.. ..+.+.|++.| +++.++.. . + . .++|.|++||+....
T Consensus 1 m~I~iid~~~g~~---~s~~~~l~~~G~~~~~~~~~~~~~-~--------------~------~-~~~dglilpG~g~~~ 55 (201)
T 1gpw_B 1 MRIGIISVGPGNI---MNLYRGVKRASENFEDVSIELVES-P--------------R------N-DLYDLLFIPGVGHFG 55 (201)
T ss_dssp CEEEEECCSSSCC---HHHHHHHHHHSTTBSSCEEEEECS-C--------------C------S-SCCSEEEECCCSCSH
T ss_pred CEEEEEecCCchH---HHHHHHHHHcCCCCCceEEEEECC-C--------------c------c-cCCCEEEECCCCcHH
Confidence 5788886652222 33446777777 77665442 1 1 1 468999999952211
Q ss_pred Hhh--hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 236 QAF--AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 236 ~~l--~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
... ..+..+.++|+++.++++||.+||.|..+ |+.+
T Consensus 56 ~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Ql-l~~~ 93 (201)
T 1gpw_B 56 EGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQL-LFEE 93 (201)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHT-TSSE
T ss_pred HHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHH-HHHh
Confidence 111 11123778999999999999999999766 7765
No 80
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=97.46 E-value=0.00028 Score=58.63 Aligned_cols=83 Identities=23% Similarity=0.283 Sum_probs=54.1
Q ss_pred CeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh-hh
Q 019238 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA-FA 239 (344)
Q Consensus 161 ~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~-l~ 239 (344)
|||+|+-.+| .+....+.|+++|+++.++... ++. .++|.|++|||...... +.
T Consensus 1 m~i~vl~~~g----~~~~~~~~l~~~G~~~~~~~~~-------------------~~~--~~~dglil~GG~~~~~~~~~ 55 (186)
T 2ywj_A 1 MIIGVLAIQG----DVEEHEEAIKKAGYEAKKVKRV-------------------EDL--EGIDALIIPGGESTAIGKLM 55 (186)
T ss_dssp CEEEEECSSS----CCHHHHHHHHHTTSEEEEECSG-------------------GGG--TTCSEEEECCSCHHHHHHHH
T ss_pred CEEEEEecCc----chHHHHHHHHHCCCEEEEECCh-------------------HHh--ccCCEEEECCCCchhhhhhh
Confidence 5788886543 2333468889999877665320 123 57899999999532221 11
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 240 ~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
....+.++++ ++++||.+||.|..+ |+.+
T Consensus 56 ~~~~~~~~i~---~~~~PilGIC~G~Ql-l~~~ 84 (186)
T 2ywj_A 56 KKYGLLEKIK---NSNLPILGTCAGMVL-LSKG 84 (186)
T ss_dssp HHTTHHHHHH---TCCCCEEEETHHHHH-HSSC
T ss_pred hccCHHHHHH---hcCCcEEEECHHHHH-HHHH
Confidence 1223556665 788999999999776 7765
No 81
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.36 E-value=0.00024 Score=61.64 Aligned_cols=94 Identities=20% Similarity=0.273 Sum_probs=60.4
Q ss_pred CeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh---
Q 019238 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA--- 237 (344)
Q Consensus 161 ~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~--- 237 (344)
.||.|+ ..+.......+...|+..|+++.++-.+.+ +...+.. .++|.|++|||......
T Consensus 13 ~~~~~i--~~~~~~~~~~i~~~l~~~G~~v~v~~~~~~-------------~~~~~~l--~~~Dglil~GG~~~~~~~~~ 75 (239)
T 1o1y_A 13 VRVLAI--RHVEIEDLGMMEDIFREKNWSFDYLDTPKG-------------EKLERPL--EEYSLVVLLGGYMGAYEEEK 75 (239)
T ss_dssp CEEEEE--CSSTTSSCTHHHHHHHHTTCEEEEECGGGT-------------CCCSSCG--GGCSEEEECCCSCCTTCTTT
T ss_pred eEEEEE--ECCCCCCchHHHHHHHhCCCcEEEeCCcCc-------------cccccch--hcCCEEEECCCCccccCCcc
Confidence 455444 444444555778899999988875443221 0001122 56899999998533221
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
...-..+.++|+++.++++||.+||-|..+ |+.+
T Consensus 76 ~~~l~~~~~~i~~~~~~~~PiLGIC~G~Ql-L~~a 109 (239)
T 1o1y_A 76 YPFLKYEFQLIEEILKKEIPFLGICLGSQM-LAKV 109 (239)
T ss_dssp CTHHHHHHHHHHHHHHHTCCEEEETHHHHH-HHHH
T ss_pred ChhHHHHHHHHHHHHHCCCCEEEEchhHHH-HHHH
Confidence 111135789999999999999999999876 6653
No 82
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=97.24 E-value=0.00033 Score=60.33 Aligned_cols=96 Identities=14% Similarity=0.094 Sum_probs=63.0
Q ss_pred CCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccc-
Q 019238 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG- 234 (344)
Q Consensus 159 ~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~- 234 (344)
..+||+|+-+-. -.+.-+....+.|++.|+++..+.... + ..+.+ .+.|.|++|||...
T Consensus 30 ~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~--------------d-~~~~l--~~ad~I~lpGG~~~~ 92 (229)
T 1fy2_A 30 GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVA--------------D-PLAAI--EKAEIIIVGGGNTFQ 92 (229)
T ss_dssp TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSS--------------C-HHHHH--HHCSEEEECCSCHHH
T ss_pred CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEeccc--------------c-HHHHH--hcCCEEEECCCcHHH
Confidence 347888887642 223344567788999887665432111 1 12344 56799999998421
Q ss_pred hHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 235 AQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 235 ~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
.........+.+.|++++++|++++++|.|+.+ |+..
T Consensus 93 ~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~-l~~~ 129 (229)
T 1fy2_A 93 LLKESRERGLLAPMADRVKRGALYIGWSAGANL-ACPT 129 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHH-TSSB
T ss_pred HHHHHHHCChHHHHHHHHHcCCEEEEECHHHHh-hccc
Confidence 122334556888999999999999999999654 7653
No 83
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=97.21 E-value=0.00039 Score=58.77 Aligned_cols=98 Identities=11% Similarity=0.036 Sum_probs=65.0
Q ss_pred CCeEEEEeCCCc---chhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccc-h
Q 019238 160 SPQILVPIANGS---EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG-A 235 (344)
Q Consensus 160 ~~~v~ill~~g~---~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~-~ 235 (344)
.+||+++-+-.- ...-+....+.|++.|++++.+..... .++...+.+ .+.|+|++|||... .
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~-----------~~~~~~~~l--~~ad~I~l~GG~~~~l 93 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATE-----------SLGEITTKL--RKNDFIYVTGGNTFFL 93 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTS-----------CHHHHHHHH--HHSSEEEECCSCHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCC-----------ChHHHHHHH--HhCCEEEECCCCHHHH
Confidence 488988875421 112345678999999998776543321 011111333 56799999998421 2
Q ss_pred HhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 236 QAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 236 ~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
........+.+.|++.+++|++++++|.|+.+ ++.
T Consensus 94 ~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~-l~~ 128 (206)
T 3l4e_A 94 LQELKRTGADKLILEEIAAGKLYIGESAGAVI-TSP 128 (206)
T ss_dssp HHHHHHHTHHHHHHHHHHTTCEEEEETHHHHT-TSS
T ss_pred HHHHHHCChHHHHHHHHHcCCeEEEECHHHHH-hcc
Confidence 22345667899999999999999999999654 653
No 84
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=97.18 E-value=0.0013 Score=60.66 Aligned_cols=87 Identities=18% Similarity=0.252 Sum_probs=63.4
Q ss_pred CeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhc
Q 019238 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (344)
Q Consensus 161 ~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~ 240 (344)
+||+++=+ |+. ....+.|.+.|+++.++..+. ..+++...++|.|+++||.+.+. +
T Consensus 191 ~~V~viD~-G~k----~ni~r~L~~~G~~v~vvp~~~----------------~~e~i~~~~~DGliLsGGPgdp~---~ 246 (379)
T 1a9x_B 191 FHVVAYDF-GAK----RNILRMLVDRGCRLTIVPAQT----------------SAEDVLKMNPDGIFLSNGPGDPA---P 246 (379)
T ss_dssp EEEEEEES-SCC----HHHHHHHHHTTEEEEEEETTC----------------CHHHHHTTCCSEEEECCCSBCST---T
T ss_pred CEEEEEEC-CCh----HHHHHHHHHCCCEEEEEeccC----------------CHHHHhhcCCCEEEEeCCCCChH---H
Confidence 57887777 654 347788889998887764432 12333334699999999965432 3
Q ss_pred CHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 241 SKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 241 ~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
....+++|+++.++++||.+||-|..+ |+.+
T Consensus 247 ~~~~~~~Ir~~~~~~~PILGIClG~QL-La~A 277 (379)
T 1a9x_B 247 CDYAITAIQKFLETDIPVFGICLGHQL-LALA 277 (379)
T ss_dssp CHHHHHHHHHHTTSCCCEEEETHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECchHHH-HHHH
Confidence 567889999999999999999999876 6643
No 85
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=97.14 E-value=0.00088 Score=56.91 Aligned_cols=89 Identities=19% Similarity=0.192 Sum_probs=56.2
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC-ccchHh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG-LGGAQA 237 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG-~~~~~~ 237 (344)
.++||.++=+.+... ..+.+.|+++|+++.++..+. ..+++ .++|.||+||| ......
T Consensus 12 ~~~~i~~id~~~~~~---~~~~~~l~~~G~~~~vv~~~~----------------~~~~l--~~~DglIl~GG~p~~~~~ 70 (212)
T 2a9v_A 12 HMLKIYVVDNGGQWT---HREWRVLRELGVDTKIVPNDI----------------DSSEL--DGLDGLVLSGGAPNIDEE 70 (212)
T ss_dssp CCCBEEEEEESCCTT---CHHHHHHHHTTCBCCEEETTS----------------CGGGG--TTCSEEEEEEECSCGGGT
T ss_pred ccceEEEEeCCCccH---HHHHHHHHHCCCEEEEEeCCC----------------CHHHH--hCCCEEEECCCCCCCCcc
Confidence 467877766543333 346677888888776655432 23444 45999999999 443333
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
....+.+.+++ .++++||.+||-|..+ |+.+
T Consensus 71 ~~~~~~l~~~~---~~~~~PiLGIC~G~Ql-l~~~ 101 (212)
T 2a9v_A 71 LDKLGSVGKYI---DDHNYPILGICVGAQF-IALH 101 (212)
T ss_dssp GGGHHHHHHHH---HHCCSCEEEETHHHHH-HHHH
T ss_pred cccchhHHHHH---HhCCCCEEEEChHHHH-HHHH
Confidence 21233444444 4789999999999776 6654
No 86
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=96.77 E-value=0.0028 Score=56.61 Aligned_cols=113 Identities=9% Similarity=0.063 Sum_probs=61.9
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCC--eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKA--NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~--~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+++||+||-...-...--..+...|..... +++++....+..-.++....-.--..+++....+||.+||-|+.....
T Consensus 34 rplkI~ILnlmp~k~~te~qf~rlL~~~~~qv~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGap~~~~ 113 (301)
T 2vdj_A 34 RALKIAILNLMPTKQETEAQLLRLIGNTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPVETL 113 (301)
T ss_dssp CCEEEEEECCCSSHHHHHHHHHHHHTCSSSCEEEEEECCCC------------CCEECHHHHTTSCEEEEEECCCTTTTS
T ss_pred CCceEEEEeCCCCcCchHHHHHHHhcCCCCcEEEEEEeccCCCCCCccHHHHhhcccCcccccccccCEEEECCCCCcCC
Confidence 578999998643222222345555555554 444454443211111111110001135555557899999999852211
Q ss_pred h---hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 237 A---FAKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 237 ~---l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
. ..-=+.+.++++...++++++.+||-|..+++..
T Consensus 114 ~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~ 151 (301)
T 2vdj_A 114 SFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYH 151 (301)
T ss_dssp CGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHH
T ss_pred CcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHH
Confidence 1 1111567788888888999999999998774443
No 87
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=96.69 E-value=0.0013 Score=56.10 Aligned_cols=88 Identities=11% Similarity=0.095 Sum_probs=52.6
Q ss_pred CCeEEEEeCC-CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 160 SPQILVPIAN-GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 160 ~~~v~ill~~-g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
.++|+|+=+. ++. ..+...|+..|+++.++..+.. .+++...++|.|++|||.......
T Consensus 24 ~~~I~iiD~g~~~~----~~i~~~l~~~G~~~~vv~~~~~----------------~~~l~~~~~dglil~Gg~~~~~~~ 83 (218)
T 2vpi_A 24 EGAVVILDAGAQYG----KVIDRRVRELFVQSEIFPLETP----------------AFAIKEQGFRAIIISGGPNSVYAE 83 (218)
T ss_dssp TTCEEEEECSTTTT----HHHHHHHHHTTCCEEEECTTCC----------------HHHHHHHTCSEEEEEC--------
T ss_pred CCeEEEEECCCchH----HHHHHHHHHCCCEEEEEECCCC----------------hHHHhhcCCCEEEECCCCcccccc
Confidence 4789988554 442 3566888889988877665431 222322469999999995322211
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
..+ .+.+...++++||.+||.|..+ |+.+
T Consensus 84 -~~~---~~~~~~~~~~~PilGIC~G~Ql-l~~~ 112 (218)
T 2vpi_A 84 -DAP---WFDPAIFTIGKPVLGICYGMQM-MNKV 112 (218)
T ss_dssp --CC---CCCGGGGTSSCCEEEETHHHHH-HHHH
T ss_pred -cch---hHHHHHHHcCCCEEEEcHHHHH-HHHH
Confidence 111 1223445789999999999876 6653
No 88
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=96.67 E-value=0.003 Score=56.57 Aligned_cols=115 Identities=10% Similarity=0.052 Sum_probs=64.9
Q ss_pred CCCCeEEEEeCCCcchhHHHHHHHHHHhcCCeE--EEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccch
Q 019238 158 DNSPQILVPIANGSEEMEAVIIIDILRRAKANV--VVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (344)
Q Consensus 158 ~~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v--~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~ 235 (344)
.+++||+||-...-...--..+...|.....++ +++.+.....-.++....-.--.++++....+||.+||-|+....
T Consensus 45 irplkI~ILnlmp~k~~te~qf~rlL~~~~~qv~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGsP~~~ 124 (312)
T 2h2w_A 45 IRPLEILILNLMPDKIKTEIQLLRLLGNTPLQVNVTLLYTETHKPKHTPIEHILKFYTTFSAVKDRKFDGFIITGAPVEL 124 (312)
T ss_dssp CCCEEEEEECCCSSHHHHHHHHHHHHHSSSSCEEEEEECCSCCCCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCCSCTT
T ss_pred CCCceEEEEeCCCCcCchHHHHHHHhcCCCCcEEEEEEEccCCCCCCccHHHHhhccCCcccccccCcCEEEECCCCCCC
Confidence 367899999864332222244566666666444 444443321111110000000013555555789999999985321
Q ss_pred Hhh---hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 236 QAF---AKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 236 ~~l---~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
... .-=+.+.++++...++++++.+||-|..+++..+
T Consensus 125 ~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~ 164 (312)
T 2h2w_A 125 LPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYF 164 (312)
T ss_dssp SCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHH
T ss_pred CCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHh
Confidence 111 1115677888888889999999999987745443
No 89
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=96.53 E-value=0.0067 Score=52.90 Aligned_cols=98 Identities=15% Similarity=0.181 Sum_probs=57.9
Q ss_pred CCCeEEEEeCCCcch------hHH----HHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEE
Q 019238 159 NSPQILVPIANGSEE------MEA----VIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVL 228 (344)
Q Consensus 159 ~~~~v~ill~~g~~~------~e~----~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~lii 228 (344)
+++.|+|........ ... ....+.+.++|....++..... . .+.+. ..++|.|++
T Consensus 3 ~~p~IGi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~pv~lp~~~~-------------~-~~~~~-l~~~DGlil 67 (254)
T 3fij_A 3 LKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDP-------------S-TAVQA-ISLVDGLLL 67 (254)
T ss_dssp CCCEEEEEC------------------CHHHHHHHHHHTCEEEEECCCCG-------------G-GHHHH-HHTCSEEEE
T ss_pred CCCEEEEeCCcccccccccCCcchhhhhHHHHHHHHHCCCEEEEEeCCCc-------------h-HHHHH-HhhCCEEEE
Confidence 346788876532111 111 2356677778877766654331 0 11211 146899999
Q ss_pred cCCcc-chHh-------------hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 229 PGGLG-GAQA-------------FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 229 pGG~~-~~~~-------------l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
+||.. .+.. ...+...+++|+++.++++||.+||-|..+ |+.+
T Consensus 68 ~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Ql-l~~a 124 (254)
T 3fij_A 68 TGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQL-VNVA 124 (254)
T ss_dssp CCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHH-HHHH
T ss_pred CCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHH-HHHH
Confidence 99942 1111 112344789999999999999999999766 6654
No 90
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.41 E-value=0.0033 Score=61.23 Aligned_cols=90 Identities=13% Similarity=0.063 Sum_probs=59.6
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC-ccchH-h
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG-LGGAQ-A 237 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG-~~~~~-~ 237 (344)
+++|+|+-+.. ..+....+.|++.|+++.++.... . ... .++|.||+||| ..... .
T Consensus 4 m~~I~Iid~~~---g~~~~~~~~l~~~G~~~~vv~~~~----------------~-~~l--~~~DglILpGgG~~~~~~~ 61 (555)
T 1jvn_A 4 MPVVHVIDVES---GNLQSLTNAIEHLGYEVQLVKSPK----------------D-FNI--SGTSRLILPGVGNYGHFVD 61 (555)
T ss_dssp SCEEEEECCSC---SCCHHHHHHHHHTTCEEEEESSGG----------------G-CCS--TTCSCEEEEECSCHHHHHH
T ss_pred CCEEEEEECCC---CCHHHHHHHHHHCCCEEEEECCcc----------------c-ccc--ccCCEEEECCCCchHhHhh
Confidence 57899997641 122356788888998877654211 0 112 57899999995 31111 1
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
...+..+.++|+++.++++||.+||.|..+ |+.+
T Consensus 62 ~l~~~~~~~~i~~~~~~g~PiLGIC~G~Ql-L~~a 95 (555)
T 1jvn_A 62 NLFNRGFEKPIREYIESGKPIMGIXVGLQA-LFAG 95 (555)
T ss_dssp HHHHTTCHHHHHHHHHTTCCEEEEEHHHHT-TEEE
T ss_pred hhhhccHHHHHHHHHHcCCcEEEEchhhhh-hhhh
Confidence 112234678999999999999999999766 7764
No 91
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=96.28 E-value=0.011 Score=57.50 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=57.8
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~ 239 (344)
..+|+|+=+-.-. ...+...++..|..++++..+. .++++...++|.||+|||.......
T Consensus 7 ~~~IlilD~Gs~~---~~~I~r~lre~Gv~~eiv~~~~----------------~~~~i~~~~~dgIIlsGGp~s~~~~- 66 (556)
T 3uow_A 7 YDKILVLNFGSQY---FHLIVKRLNNIKIFSETKDYGV----------------ELKDIKDMNIKGVILSGGPYSVTEA- 66 (556)
T ss_dssp CCEEEEEESSCTT---HHHHHHHHHHTTCCEEEEETTC----------------CGGGTTTSCEEEEEECCCSCCTTST-
T ss_pred CCEEEEEECCCcc---HHHHHHHHHHCCCeEEEEECCC----------------CHHHHhhcCCCEEEECCCCCccccc-
Confidence 3677766543222 2356788889998887776543 2344433478999999996543221
Q ss_pred cCHHH-HHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 240 KSKKL-VNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 240 ~~~~l-~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
..+.+ ..+++.+.++++||.+||.|..+ |+.+
T Consensus 67 ~~~~~~~~l~~~a~~~g~PvLGIC~G~Ql-La~~ 99 (556)
T 3uow_A 67 GSPHLKKEVFEYFLEKKIPIFGICYGMQE-IAVQ 99 (556)
T ss_dssp TCCCCCHHHHHHHHHTTCCEEEETHHHHH-HHHH
T ss_pred CCcchhHHHHHHhhhcCCCEEEECHHHHH-HHHH
Confidence 11222 23444456779999999999776 7654
No 92
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=96.13 E-value=0.01 Score=52.38 Aligned_cols=95 Identities=14% Similarity=0.160 Sum_probs=57.1
Q ss_pred CeEEEEeCCC--cchhHHHHHHHHHHhc----CCeEEEEEeCCCceeeeccceeeeecccc-ccccCCCccEEEEcCCcc
Q 019238 161 PQILVPIANG--SEEMEAVIIIDILRRA----KANVVVASVADKLEILASCQVKLVADMLI-DEAAKLSYDLIVLPGGLG 233 (344)
Q Consensus 161 ~~v~ill~~g--~~~~e~~~~~~~l~~~----~~~v~~~s~~~~~~v~~~~g~~v~~~~~~-~~~~~~~~D~liipGG~~ 233 (344)
.+|+|+.-.| +.+ ++..+...|..+ +.++.++..+.. .+....+. .+ +.. .++|.|++|||.+
T Consensus 9 ~~Iaivg~y~~~~~d-ny~S~~~aL~~~g~~~~~~v~v~~~~~~-~~~~~~~~------~~~~~~--~~~dgiil~GG~~ 78 (273)
T 2w7t_A 9 VRIAFVGKYLQDAGD-TYFSVLQCFEHCQIALQVRLDILYVDSE-ELEGPNAD------EARKAL--LGCDGIFVPGGFG 78 (273)
T ss_dssp EEEEEEECCHHHHTT-TTHHHHHHHHHHHHHHTCCEEEEEEEGG-GGSSTTTH------HHHHHH--HTCSEEEECCCCT
T ss_pred CEEEEEeCCCcCCch-HHHHHHHHHHHHHHhcCCceEEeccChh-hcccccch------hHHHHH--hhCCEEEecCCCC
Confidence 6888884332 222 445555555444 455666655431 11110000 02 223 5789999999964
Q ss_pred chHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhh
Q 019238 234 GAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLE 270 (344)
Q Consensus 234 ~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa 270 (344)
. . ..+..+++++.+.++++||.+||-|..+ |+
T Consensus 79 ~-~---~~~~~~~~i~~~~~~~~PilGIC~G~Ql-l~ 110 (273)
T 2w7t_A 79 N-R---GVDGKCAAAQVARMNNIPYFGVXLGMQV-AV 110 (273)
T ss_dssp T-T---THHHHHHHHHHHHHHTCCEEEETHHHHH-HH
T ss_pred C-c---CchhHHHHHHHHHHCCCcEEEECcCHHH-HH
Confidence 3 2 2235778899988899999999999877 54
No 93
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=96.01 E-value=0.0083 Score=54.06 Aligned_cols=96 Identities=19% Similarity=0.146 Sum_probs=58.0
Q ss_pred CCeEEEEeCCCcch--------hHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC
Q 019238 160 SPQILVPIANGSEE--------MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 160 ~~~v~ill~~g~~~--------~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG 231 (344)
++.|+|+...+... .-.....+.|+++|.++.++..... ++ .+.+. ..++|.|++|||
T Consensus 30 ~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~------------~~-~i~~~-l~~~dglil~GG 95 (315)
T 1l9x_A 30 KPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLT------------EK-DYEIL-FKSINGILFPGG 95 (315)
T ss_dssp CCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCC------------HH-HHHHH-HHHSSEEEECCC
T ss_pred CCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEEecCCC------------HH-HHHHH-HhcCCEEEEeCC
Confidence 46899987643211 0112457888888988877655431 00 11111 146899999999
Q ss_pred ccchHhh---hcCHHHHHHHHHHHhcC--CcEEEEcchhhhhhh
Q 019238 232 LGGAQAF---AKSKKLVNMLKKQKESN--RPYGAICASPALVLE 270 (344)
Q Consensus 232 ~~~~~~l---~~~~~l~~~l~~~~~~~--k~I~aic~G~~~lLa 270 (344)
....... .....++++++++.+++ +||.+||-|..+ |+
T Consensus 96 ~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Ql-l~ 138 (315)
T 1l9x_A 96 SVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEE-LS 138 (315)
T ss_dssp CCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHH-HH
T ss_pred CcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHH-HH
Confidence 5332211 01135677777776664 999999999876 54
No 94
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=95.69 E-value=0.0093 Score=53.05 Aligned_cols=101 Identities=13% Similarity=0.145 Sum_probs=59.4
Q ss_pred CeEEEE-eCCCcchhHHHHHHHHHHhcCC----eEEEEEeCCCceeeeccceeeeeccc-cccc--cCCCccEEEEcCCc
Q 019238 161 PQILVP-IANGSEEMEAVIIIDILRRAKA----NVVVASVADKLEILASCQVKLVADML-IDEA--AKLSYDLIVLPGGL 232 (344)
Q Consensus 161 ~~v~il-l~~g~~~~e~~~~~~~l~~~~~----~v~~~s~~~~~~v~~~~g~~v~~~~~-~~~~--~~~~~D~liipGG~ 232 (344)
+||+|+ =+.+.... +..+.+.|+.+|+ ++.+...+.. .+... .+..+.. ++++ ...++|.|++|||.
T Consensus 26 ~~Iavv~d~~~~~~s-~~si~~~L~~~G~~~~~~v~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~l~~~dgiil~GG~ 100 (289)
T 2v4u_A 26 CSIALVGKYTKLRDC-YASVFKALEHSALAINHKLNLMYIDSI-DLEKI---TETEDPVKFHEAWQKLCKADGILVPGGF 100 (289)
T ss_dssp EEEEEEESCSSCCGG-GHHHHHHHHHHHHHTTEEEEEEEEEGG-GGSHH---HHHHCHHHHHHHHHHHHHCSEEEECSCC
T ss_pred eEEEEEecCcCCCcc-HHHHHHHHHHhhhhhCCceEEEEechh-hcccc---cccCChhhhhhHHHHHhhCCEEEecCCC
Confidence 588887 45344331 3466777777653 3444444331 11100 0111110 1110 01568999999996
Q ss_pred cchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 233 GGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 233 ~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
+. .. .+...++++++.+.++||.+||.|..+ |+.
T Consensus 101 ~~-~~---~~~~~~~i~~~~~~~~PilGIC~G~Q~-l~~ 134 (289)
T 2v4u_A 101 GI-RG---TLGKLQAISWARTKKIPFLGVXLGMQL-AVI 134 (289)
T ss_dssp SS-TT---HHHHHHHHHHHHHTTCCEEEETHHHHH-HHH
T ss_pred Cc-hh---HHHHHHHHHHHHHcCCcEEEECccHHH-HHH
Confidence 53 22 256889999999999999999999876 654
No 95
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=95.26 E-value=0.056 Score=53.44 Aligned_cols=88 Identities=22% Similarity=0.361 Sum_probs=59.2
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~ 239 (344)
.++|.|+=+ .+.. ...+...|+..|++++++..+. + .+. .++|.|||+||.+.+...
T Consensus 446 Gk~IlviD~--gdsf-~~~l~~~l~~~G~~v~Vv~~d~--~---------------~~~--~~~DgIIlsGGPg~p~d~- 502 (645)
T 3r75_A 446 GCRALIVDA--EDHF-TAMIAQQLSSLGLATEVCGVHD--A---------------VDL--ARYDVVVMGPGPGDPSDA- 502 (645)
T ss_dssp TCEEEEEES--SCTH-HHHHHHHHHHTTCEEEEEETTC--C---------------CCG--GGCSEEEECCCSSCTTCT-
T ss_pred CCEEEEEEC--CccH-HHHHHHHHHHCCCEEEEEECCC--c---------------ccc--cCCCEEEECCCCCChhhh-
Confidence 467665533 2222 2457788888999888776543 1 112 468999999986544331
Q ss_pred cC---HHHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 240 KS---KKLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 240 ~~---~~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
.+ ..+.++|++..+.++||.+||-|..+ |+.
T Consensus 503 ~~p~i~~~~~lI~~a~~~~iPiLGIClG~Ql-La~ 536 (645)
T 3r75_A 503 GDPRIARLYAWLRHLIDEGKPFMAVCLSHQI-LNA 536 (645)
T ss_dssp TSHHHHHHHHHHHHHHHHTCCEEEETHHHHH-HHH
T ss_pred hhhhHHHHHHHHHHHHHCCCCEEEECHHHHH-HHH
Confidence 22 24678889888999999999999877 654
No 96
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=95.00 E-value=0.023 Score=54.90 Aligned_cols=87 Identities=15% Similarity=0.063 Sum_probs=53.4
Q ss_pred CeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhc
Q 019238 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (344)
Q Consensus 161 ~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~ 240 (344)
.+|+|+=+..-. ...+...++..|..++++..+. ..+++...++|.||+|||.....
T Consensus 11 ~~I~IlD~g~~~---~~~i~r~lr~~Gv~~~i~p~~~----------------~~~~i~~~~~dgIILsGGp~sv~---- 67 (527)
T 3tqi_A 11 HRILILDFGSQY---AQLIARRVREIGVYCELMPCDI----------------DEETIRDFNPHGIILSGGPETVT---- 67 (527)
T ss_dssp SEEEEEECSCTT---HHHHHHHHHHHTCEEEEEETTC----------------CSSSSTTTCCSEEEECCCCC-------
T ss_pred CeEEEEECCCcc---HHHHHHHHHHCCCeEEEEECCC----------------CHHHHHhcCCCEEEECCcCcccc----
Confidence 578887653222 2456788899998887775432 12333223579999999964332
Q ss_pred CHHHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 241 SKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 241 ~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
+.......+...+.++||.+||.|..+ |+.
T Consensus 68 ~~~~~~~~~~~~~~~~PvLGIC~G~Ql-la~ 97 (527)
T 3tqi_A 68 LSHTLRAPAFIFEIGCPVLGICYGMQT-MAY 97 (527)
T ss_dssp ------CCCSTTTSSSCEEEETHHHHH-HHH
T ss_pred cCCChhhHHHHHhcCCCEEEEChHHHH-HHH
Confidence 112223345567789999999999776 664
No 97
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=94.96 E-value=0.018 Score=47.88 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=45.1
Q ss_pred hHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccccC---CCchhhh-cccCChHHHHHHHHHhhCCCEEEEEc
Q 019238 6 TIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGAT-NLKESEVLESIVKKQASDGRLYAAIC 81 (344)
Q Consensus 6 ~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~---gG~~~~~-~~~~~~~~~~~l~~~~~~g~~i~aiC 81 (344)
..+.|++.|+++.++++.. .+++.+-. ||.+... .++.+..+.++|+++.++++++.+||
T Consensus 16 ~~~~l~~~g~~~~~~~~~~----------------~l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC 79 (196)
T 2nv0_A 16 HIHAIEACGAAGLVVKRPE----------------QLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTC 79 (196)
T ss_dssp HHHHHHHTTCEEEEECSGG----------------GGGGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEET
T ss_pred HHHHHHHCCCEEEEeCChH----------------HHhhCCEEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEEC
Confidence 3467888898887775420 12222211 6643332 23334556789999999999999999
Q ss_pred hhHHHHHHHc
Q 019238 82 VFLAVALGSW 91 (344)
Q Consensus 82 ~g~~~~La~a 91 (344)
.|.. +|+.+
T Consensus 80 ~G~q-~l~~~ 88 (196)
T 2nv0_A 80 AGLI-ILAKE 88 (196)
T ss_dssp HHHH-HHSBC
T ss_pred HHHH-HHHHH
Confidence 9995 88764
No 98
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=94.50 E-value=0.016 Score=49.18 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=44.2
Q ss_pred HHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccccC---CCchhhh-cccCChHHHHHHHHHhhCCCEEEEEch
Q 019238 7 IDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGAT-NLKESEVLESIVKKQASDGRLYAAICV 82 (344)
Q Consensus 7 ~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~---gG~~~~~-~~~~~~~~~~~l~~~~~~g~~i~aiC~ 82 (344)
.+.|+++|+++.+++... .+++++-. ||..... .+..+..+.++|+++.++++++.+||.
T Consensus 39 ~~~l~~~G~~~~~~~~~~----------------~l~~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~ 102 (219)
T 1q7r_A 39 VRAIEACGAEAVIVKKSE----------------QLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCA 102 (219)
T ss_dssp HHHHHHTTCEEEEECSGG----------------GGTTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHCCCEEEEECCHH----------------HHhhCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECH
Confidence 466778888877766420 12222211 6643222 222244567899999999999999999
Q ss_pred hHHHHHHHc
Q 019238 83 FLAVALGSW 91 (344)
Q Consensus 83 g~~~~La~a 91 (344)
|.. +|+.+
T Consensus 103 G~Q-lL~~~ 110 (219)
T 1q7r_A 103 GLI-LLAKR 110 (219)
T ss_dssp HHH-HHEEE
T ss_pred HHH-HHHHH
Confidence 995 88865
No 99
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=94.29 E-value=0.074 Score=47.12 Aligned_cols=99 Identities=12% Similarity=0.067 Sum_probs=63.0
Q ss_pred CeEEEEeCCCcchhH-HHHHHHHHHhcCC-eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCcc-chHh
Q 019238 161 PQILVPIANGSEEME-AVIIIDILRRAKA-NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLG-GAQA 237 (344)
Q Consensus 161 ~~v~ill~~g~~~~e-~~~~~~~l~~~~~-~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~-~~~~ 237 (344)
.+|+++-+-.-+..+ .....+.|++.|+ +++.+..... . . ...+...+.+ .+.|+|+|+||.. ....
T Consensus 57 ~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r-~-----~--a~~~~~~~~l--~~ad~I~v~GGnt~~l~~ 126 (291)
T 3en0_A 57 AIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDR-A-----Q--GDDSGYRLFV--EQCTGIFMTGGDQLRLCG 126 (291)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSG-G-----G--GGCHHHHHHH--HHCSEEEECCSCHHHHHH
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCc-c-----c--cCCHHHHHHH--hcCCEEEECCCCHHHHHH
Confidence 678877665433333 3356778888898 6666555331 0 0 0000012233 5679999999942 1223
Q ss_pred hhcCHHHHHHHHHHHhcC-CcEEEEcchhhhhhh
Q 019238 238 FAKSKKLVNMLKKQKESN-RPYGAICASPALVLE 270 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~-k~I~aic~G~~~lLa 270 (344)
......+.+.|++.+++| .++++.|+|+.+ ++
T Consensus 127 ~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i-~~ 159 (291)
T 3en0_A 127 LLADTPLMDRIRQRVHNGEISLAGTSAGAAV-MG 159 (291)
T ss_dssp HHTTCHHHHHHHHHHHTTSSEEEEETHHHHT-TS
T ss_pred HHHhCCHHHHHHHHHHCCCeEEEEeCHHHHh-hh
Confidence 456778999999999999 899999999654 53
No 100
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=93.88 E-value=0.19 Score=41.37 Aligned_cols=90 Identities=21% Similarity=0.240 Sum_probs=49.8
Q ss_pred eEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeecccc-ccccCCCccEEEEcCCccchHhhhc
Q 019238 162 QILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLI-DEAAKLSYDLIVLPGGLGGAQAFAK 240 (344)
Q Consensus 162 ~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~-~~~~~~~~D~liipGG~~~~~~l~~ 240 (344)
||+|+=..+. . ...+.+.|++.|+++.++..... .+ .+ +.....++|.+++.||.+.+..
T Consensus 2 ~i~iiDn~~s--~-~~~i~~~l~~~G~~~~v~~~~~~------------~~-~i~~~l~~~~~~~iil~gGpg~~~~--- 62 (192)
T 1i1q_B 2 DILLLDNIDS--F-TWNLADQLRTNGHNVVIYRNHIP------------AQ-TLIDRLATMKNPVLMLSPGPGVPSE--- 62 (192)
T ss_dssp EEEEEECSCS--S-HHHHHHHHHHTTCEEEEEETTSC------------SH-HHHHHHTTCSSEEEEECCCSSCGGG---
T ss_pred cEEEEECCcc--H-HHHHHHHHHHCCCeEEEEECCCC------------HH-HHHHHhhhccCCeEEECCCCcCchh---
Confidence 5666653222 2 23457888888988877665421 00 11 1111113444677666444332
Q ss_pred CHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 241 SKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 241 ~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
.....++++ ..++++||.+||-|..+ |+.+
T Consensus 63 ~~~~~~l~~-~~~~~~PilGIC~G~Ql-l~~~ 92 (192)
T 1i1q_B 63 AGCMPELLT-RLRGKLPIIGICLGHQA-IVEA 92 (192)
T ss_dssp STTHHHHHH-HHBTTBCEEEETHHHHH-HHHH
T ss_pred CchHHHHHH-HHhcCCCEEEECcChHH-HHHH
Confidence 223344444 45788999999999876 6653
No 101
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=93.64 E-value=0.085 Score=50.94 Aligned_cols=87 Identities=13% Similarity=0.074 Sum_probs=54.5
Q ss_pred CeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhc
Q 019238 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (344)
Q Consensus 161 ~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~ 240 (344)
++|+|+=+.+-.. ..+...++..|..++++..+. ..+++...++|.||+|||....... .
T Consensus 8 ~~IlIlD~g~~~~---~~i~r~lr~~G~~~~i~p~~~----------------~~~~i~~~~~dgiILsGGp~s~~~~-~ 67 (525)
T 1gpm_A 8 HRILILDFGSQYT---QLVARRVRELGVYCELWAWDV----------------TEAQIRDFNPSGIILSGGPESTTEE-N 67 (525)
T ss_dssp SEEEEEECSCTTH---HHHHHHHHHTTCEEEEEESCC----------------CHHHHHHHCCSEEEECCCSSCTTST-T
T ss_pred CEEEEEECCCccH---HHHHHHHHHCCCEEEEEECCC----------------CHHHHhccCCCEEEECCcCcccccc-C
Confidence 6788886553222 456788899998887765432 1223311246999999996433221 1
Q ss_pred CHHHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 241 SKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 241 ~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
.+.+ .+...+.++||.+||.|..+ |+.
T Consensus 68 ~~~~---~~~~~~~g~PvLGIC~G~Ql-la~ 94 (525)
T 1gpm_A 68 SPRA---PQYVFEAGVPVFGVCYGMQT-MAM 94 (525)
T ss_dssp CCCC---CGGGGTSSSCEEEETHHHHH-HHH
T ss_pred Ccch---HHHHHHCCCCEEEEChHHHH-HHH
Confidence 1222 24455789999999999876 654
No 102
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=93.63 E-value=0.032 Score=46.90 Aligned_cols=68 Identities=10% Similarity=0.213 Sum_probs=43.2
Q ss_pred HHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccccC---CCchhhh-cccCChHHHHHHHHHhhCCCEEEEEch
Q 019238 7 IDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGAT-NLKESEVLESIVKKQASDGRLYAAICV 82 (344)
Q Consensus 7 ~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~---gG~~~~~-~~~~~~~~~~~l~~~~~~g~~i~aiC~ 82 (344)
.+.|++.|+++.+++... .+++.+-. ||.+... .+..++.+.++|+++.++|+++.+||.
T Consensus 36 ~~~l~~~g~~~~~~~~~~----------------~l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~ 99 (208)
T 2iss_D 36 VEALHKLGVETLIVKLPE----------------QLDMVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCA 99 (208)
T ss_dssp HHHHHHTTCEEEEECSGG----------------GGGGCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETH
T ss_pred HHHHHHCCCEEEEeCChH----------------HHhhCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECH
Confidence 456677788777765331 12222211 6643322 122234467899999999999999999
Q ss_pred hHHHHHHHc
Q 019238 83 FLAVALGSW 91 (344)
Q Consensus 83 g~~~~La~a 91 (344)
|.. +|+.+
T Consensus 100 G~Q-lL~~~ 107 (208)
T 2iss_D 100 GVI-LLAKR 107 (208)
T ss_dssp HHH-HHEEE
T ss_pred HHH-HHHHH
Confidence 995 88865
No 103
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=93.23 E-value=0.17 Score=53.71 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=34.1
Q ss_pred ccCChHHHHHHHHHh-hCCCEEEEEchhHHHHHHHc-CCCCCC
Q 019238 57 LKESEVLESIVKKQA-SDGRLYAAICVFLAVALGSW-GLLKGL 97 (344)
Q Consensus 57 ~~~~~~~~~~l~~~~-~~g~~i~aiC~g~~~~La~a-Gll~g~ 97 (344)
...++.+.+.++++. ++++++.+||.|.. +|.++ |||.|.
T Consensus 1118 ~l~~~~l~~~l~~~~~~~g~pvLGICnG~Q-lL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1118 ILFNHRVRDEFETFFHRPQTLALGVCNGCQ-MMSNLRELIPGS 1159 (1303)
T ss_dssp HHTSHHHHHHHHHHHHSSSCEEEEETHHHH-HHHTTGGGSTTC
T ss_pred HHhchhHHHHHHHHHHhCCCcEEEECHHHH-HHHHhcCcCCCC
Confidence 346788889999865 68999999999995 99999 999764
No 104
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=93.19 E-value=0.093 Score=50.03 Aligned_cols=150 Identities=12% Similarity=0.138 Sum_probs=81.3
Q ss_pred CCCEEcCCCCCcHHHHHHHHHHHHcChhHHHHHhhcccccccCCCcceeeeccceeee-----cCCCCeEEEEe-CCCcc
Q 019238 99 DGKVVTTRGPGTPMEFVVALVEQLYGKGKADEVSGARVMRANHGDEFTIAEFNPVQWT-----FDNSPQILVPI-ANGSE 172 (344)
Q Consensus 99 dg~~iT~~g~~~~~~~~~~lv~~~~g~~~a~~v~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~v~ill-~~g~~ 172 (344)
..++|...+..+-.+.-+.|=+ +...+.+.+.+.++... ..+..-..+..+ .....+|+++= |-+..
T Consensus 234 ~~~VI~i~DvdtiY~vpl~L~~----qGl~~~~~~~l~l~~~~---~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~ 306 (535)
T 3nva_A 234 VDHIVSSYDVETSYEVPIILES----QKLVSKILSRLKLEDRQ---VDLTDWISFVNNIKGINSKKTINIALVGKYTKLK 306 (535)
T ss_dssp GGGEEEEECCSCGGGHHHHHHH----HTHHHHHHHHTTCCCCC---CCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSG
T ss_pred hhceEecCCCChHHHhHHHHHH----CCcHHHHHHHcCCCCCC---CCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCc
Confidence 4688999888875444344433 34455666666554321 111111111100 11235666554 33443
Q ss_pred hhHHHHHHHHHHhcC----CeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhcCHHHHHHH
Q 019238 173 EMEAVIIIDILRRAK----ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNML 248 (344)
Q Consensus 173 ~~e~~~~~~~l~~~~----~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l 248 (344)
+ .+..+.+.|..++ .++.+.-.+.. .+... +. ...+.+ .++|.|++|||.+.. .....+++|
T Consensus 307 D-aY~Sv~eAL~hag~~~~~~V~I~wIds~-~l~~~-~~-----~~~~~L--~~~DgIIlpGG~G~~----~~~g~i~~i 372 (535)
T 3nva_A 307 D-SYISIKEAIYHASAYIGVRPKLIWIEST-DLESD-TK-----NLNEIL--GNVNGIIVLPGFGSR----GAEGKIKAI 372 (535)
T ss_dssp G-GGHHHHHHHHHHHHHTTCEEEEEEEEGG-GGCCS-SS-----CCTTTT--TSCSEEEECCCCSST----THHHHHHHH
T ss_pred h-hHHHHHHHHHHHHHHcCCCeEEEEecch-hcccc-cc-----chhhhc--cCCCEEEECCCCCCc----cHHHHHHHH
Confidence 3 3344566666544 45554433321 11100 00 012333 679999999997542 235678899
Q ss_pred HHHHhcCCcEEEEcchhhhhhh
Q 019238 249 KKQKESNRPYGAICASPALVLE 270 (344)
Q Consensus 249 ~~~~~~~k~I~aic~G~~~lLa 270 (344)
+.+.++++|+.+||-|..+ |+
T Consensus 373 r~a~~~~~PiLGIClG~Ql-l~ 393 (535)
T 3nva_A 373 KYAREHNIPFLGICFGFQL-SI 393 (535)
T ss_dssp HHHHHHTCCEEEETHHHHH-HH
T ss_pred HHHHHcCCcEEEECcchhH-HH
Confidence 9999999999999999766 43
No 105
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.75 E-value=0.053 Score=44.67 Aligned_cols=69 Identities=16% Similarity=0.168 Sum_probs=44.5
Q ss_pred hHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccccC---CCchh-hhcccCChHHHHHHHHHhhCC-CEEEEE
Q 019238 6 TIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPG-ATNLKESEVLESIVKKQASDG-RLYAAI 80 (344)
Q Consensus 6 ~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~---gG~~~-~~~~~~~~~~~~~l~~~~~~g-~~i~ai 80 (344)
..+.|++.|+++.+++... .+++++-. ||.+. ...+..+..+.++|+++.+++ +++.+|
T Consensus 17 ~~~~l~~~G~~~~~~~~~~----------------~l~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGi 80 (191)
T 2ywd_A 17 HKEALKRLGIEAKEVRKKE----------------HLEGLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGT 80 (191)
T ss_dssp HHHHHHTTTCCCEEECSGG----------------GGTTCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHCCCEEEEeCChh----------------hhccCCEEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEE
Confidence 3566788888877765321 12222211 66322 233322356788999999999 999999
Q ss_pred chhHHHHHHHc
Q 019238 81 CVFLAVALGSW 91 (344)
Q Consensus 81 C~g~~~~La~a 91 (344)
|.|.. +|+.+
T Consensus 81 C~G~Q-~l~~~ 90 (191)
T 2ywd_A 81 CAGAI-WLAKE 90 (191)
T ss_dssp THHHH-HHEEE
T ss_pred CHHHH-HHHHH
Confidence 99995 88865
No 106
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=92.48 E-value=0.082 Score=43.98 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=44.4
Q ss_pred HHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccccC---C-Cchhh--hcccCChHHHHHHHHHhhCCCEEEEE
Q 019238 7 IDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---C-GMPGA--TNLKESEVLESIVKKQASDGRLYAAI 80 (344)
Q Consensus 7 ~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~---g-G~~~~--~~~~~~~~~~~~l~~~~~~g~~i~ai 80 (344)
.+.|++.|+++.+++... .+++.+-. | |.+.. ..++ +..+.++|+++.++++++.+|
T Consensus 19 ~~~l~~~G~~~~~~~~~~----------------~l~~~d~lil~G~g~~~~~~~~l~-~~~~~~~i~~~~~~~~PilGI 81 (200)
T 1ka9_H 19 AKALEAAGFSVAVAQDPK----------------AHEEADLLVLPGQGHFGQVMRAFQ-ESGFVERVRRHLERGLPFLGI 81 (200)
T ss_dssp HHHHHHTTCEEEEESSTT----------------SCSSCSEEEECCCSCHHHHHHTTS-SSCTHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHCCCeEEEecChH----------------HcccCCEEEECCCCcHHHHHHHHH-hcCHHHHHHHHHHcCCeEEEE
Confidence 577888999888875321 12222211 4 33221 2232 255789999999999999999
Q ss_pred chhHHHHHHHc
Q 019238 81 CVFLAVALGSW 91 (344)
Q Consensus 81 C~g~~~~La~a 91 (344)
|.|.. +|+.+
T Consensus 82 C~G~Q-ll~~~ 91 (200)
T 1ka9_H 82 CVGMQ-VLYEG 91 (200)
T ss_dssp THHHH-TTSSE
T ss_pred cHHHH-HHHHh
Confidence 99995 88877
No 107
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=92.18 E-value=0.54 Score=40.06 Aligned_cols=74 Identities=14% Similarity=0.225 Sum_probs=47.0
Q ss_pred HHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccccC---CCchhhhcccCC------hHHHHHHHHHhhCCCEE
Q 019238 7 IDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGATNLKES------EVLESIVKKQASDGRLY 77 (344)
Q Consensus 7 ~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~---gG~~~~~~~~~~------~~~~~~l~~~~~~g~~i 77 (344)
.+.+++.|++++++.+..++. + |+ .+++.+.. ||.........+ ....++|++..++++++
T Consensus 18 ~~~l~~~g~~~~~~~~~~~~~--------~-p~-~~~~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~Pv 87 (236)
T 3l7n_A 18 LAWAALRGHDVSMTKVYRYEK--------L-PK-DIDDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKII 87 (236)
T ss_dssp HHHHHHTTCEEEEEEGGGTCC--------C-CS-CGGGCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHCCCeEEEEeeeCCCC--------C-CC-CccccCEEEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCE
Confidence 455678899999988764321 1 11 12232222 553222211111 34789999999999999
Q ss_pred EEEchhHHHHHHHc
Q 019238 78 AAICVFLAVALGSW 91 (344)
Q Consensus 78 ~aiC~g~~~~La~a 91 (344)
.+||-|.- +|+.+
T Consensus 88 LGIClG~Q-lL~~~ 100 (236)
T 3l7n_A 88 VGVCLGAQ-LMGVA 100 (236)
T ss_dssp EEETHHHH-HHHHH
T ss_pred EEEchHHH-HHHHH
Confidence 99999995 89876
No 108
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=91.96 E-value=0.092 Score=52.36 Aligned_cols=89 Identities=11% Similarity=0.109 Sum_probs=53.3
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~ 239 (344)
..+|+|+=+.+-... .+...++..|+.+.++..+. ..+++...++|.||++||...... .
T Consensus 29 ~~~I~VLDfg~q~~~---liar~lre~Gv~~~ivp~~~----------------~~e~i~~~~~dGIILsGGp~s~~~-~ 88 (697)
T 2vxo_A 29 EGAVVILDAGAQYGK---VIDRRVRELFVQSEIFPLET----------------PAFAIKEQGFRAIIISGGPNSVYA-E 88 (697)
T ss_dssp CCCEEEEEEC--CHH---HHHHHHHHTTCCEEEEETTC----------------CHHHHHHHTCSEEEEEECC-------
T ss_pred CCEEEEEECCCchHH---HHHHHHHHCCCEEEEEECCC----------------CHHHHhhcCCCEEEECCCCCcccC-c
Confidence 467888866642222 25588888998887776543 123332246899999999643221 1
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhc
Q 019238 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPH 272 (344)
Q Consensus 240 ~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~a 272 (344)
..+.+ .+...+.++||.+||.|..+ |+.+
T Consensus 89 ~~~~~---~~~i~~~g~PvLGIC~G~Ql-La~~ 117 (697)
T 2vxo_A 89 DAPWF---DPAIFTIGKPVLGICYGMQM-MNKV 117 (697)
T ss_dssp -CCCC---CGGGTTSSCCEEEEEHHHHH-HHHH
T ss_pred cchhH---HHHHHhCCCCEEEECHHHHH-HHHH
Confidence 11111 13345689999999999876 7653
No 109
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=91.59 E-value=0.19 Score=48.36 Aligned_cols=45 Identities=27% Similarity=0.490 Sum_probs=36.5
Q ss_pred CCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhh
Q 019238 221 LSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLE 270 (344)
Q Consensus 221 ~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa 270 (344)
.++|.|++|||.+.+. .+..+++++++.++++|+.+||-|..+ |+
T Consensus 342 ~~~DGIilsGGpg~~~----~~g~~~~i~~a~~~~~PiLGIClG~Ql-l~ 386 (545)
T 1s1m_A 342 KGLDAILVPGGFGYRG----VEGMITTARFARENNIPYLGICLGMQV-AL 386 (545)
T ss_dssp TTCSEEEECCCCSSTT----HHHHHHHHHHHHHTTCCEEEETHHHHH-HH
T ss_pred hcCCEEEECCCCCCcc----chhhHHHHHHHHHCCCcEEEECChHHH-HH
Confidence 5789999999975432 245778999988899999999999876 55
No 110
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=91.56 E-value=0.24 Score=40.60 Aligned_cols=68 Identities=10% Similarity=0.118 Sum_probs=44.7
Q ss_pred hHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccc--cccC---CCchhhhcccCChHHHHHHHHHhhCCCEEEEE
Q 019238 6 TIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSN--CRDA---CGMPGATNLKESEVLESIVKKQASDGRLYAAI 80 (344)
Q Consensus 6 ~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~--~~~~---gG~~~~~~~~~~~~~~~~l~~~~~~g~~i~ai 80 (344)
..+.|+++|+++.++..+. . .+ .+.+ .+-. ||. ... +.....++++++.++++++.+|
T Consensus 16 ~~~~l~~~G~~~~~~~~~~--~----------~~-~~~~~~~dglil~Gg~-~~~---~~~~~~~~i~~~~~~~~PilGI 78 (189)
T 1wl8_A 16 IWRTLRYLGVETKIIPNTT--P----------LE-EIKAMNPKGIIFSGGP-SLE---NTGNCEKVLEHYDEFNVPILGI 78 (189)
T ss_dssp HHHHHHHTTCEEEEEETTC--C----------HH-HHHHTCCSEEEECCCS-CTT---CCTTHHHHHHTGGGTCSCEEEE
T ss_pred HHHHHHHCCCeEEEEECCC--C----------hH-HhcccCCCEEEECCCC-Chh---hhhhHHHHHHHHhhCCCeEEEE
Confidence 4677888999988887642 0 00 1111 1111 663 322 2455688998877899999999
Q ss_pred chhHHHHHHHc
Q 019238 81 CVFLAVALGSW 91 (344)
Q Consensus 81 C~g~~~~La~a 91 (344)
|.|.. +|+.+
T Consensus 79 C~G~Q-~l~~~ 88 (189)
T 1wl8_A 79 CLGHQ-LIAKF 88 (189)
T ss_dssp THHHH-HHHHH
T ss_pred cHHHH-HHHHH
Confidence 99995 89876
No 111
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=91.30 E-value=0.32 Score=42.00 Aligned_cols=74 Identities=15% Similarity=0.138 Sum_probs=47.1
Q ss_pred HHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccccC---CCchhhh-cccCChHHHHHHHHHhhCCCEEEEEch
Q 019238 7 IDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCRDA---CGMPGAT-NLKESEVLESIVKKQASDGRLYAAICV 82 (344)
Q Consensus 7 ~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~~~---gG~~~~~-~~~~~~~~~~~l~~~~~~g~~i~aiC~ 82 (344)
.+.|++.|++++++.+..+++. + ..+++.+-. ||..... .........++|++..+.++++.+||.
T Consensus 21 ~~~l~~~G~~v~v~~~~~~~~~---------p-~~~~~~d~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~ 90 (250)
T 3m3p_A 21 GDFLAGEHIPFQVLRMDRSDPL---------P-AEIRDCSGLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCL 90 (250)
T ss_dssp HHHHHHTTCCEEEEEGGGTCCC---------C-SCGGGSSEEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETH
T ss_pred HHHHHHCCCeEEEEeccCCCcC---------c-CccccCCEEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECH
Confidence 4557888999999887643211 1 012222211 5522211 122235678899999999999999999
Q ss_pred hHHHHHHHc
Q 019238 83 FLAVALGSW 91 (344)
Q Consensus 83 g~~~~La~a 91 (344)
|.. +|+.+
T Consensus 91 G~Q-ll~~~ 98 (250)
T 3m3p_A 91 GGQ-LLAKA 98 (250)
T ss_dssp HHH-HHHHH
T ss_pred HHH-HHHHH
Confidence 995 89887
No 112
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=91.11 E-value=0.19 Score=48.47 Aligned_cols=46 Identities=24% Similarity=0.348 Sum_probs=36.3
Q ss_pred CCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhh
Q 019238 221 LSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEP 271 (344)
Q Consensus 221 ~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~ 271 (344)
.++|.|++|||.+... .+..++.++.+.++++|+.+||-|..+ |+.
T Consensus 354 ~~~DGIILpGGfGd~~----~~g~i~~ir~a~e~~iPiLGICLGmQl-L~~ 399 (550)
T 1vco_A 354 RDVSGILVPGGFGVRG----IEGKVRAAQYARERKIPYLGICLGLQI-AVI 399 (550)
T ss_dssp TTCSCEEECCCCSSTT----HHHHHHHHHHHHHTTCCEEEETHHHHH-HHH
T ss_pred hcCCEEEECCCCCCcc----hhhhHHHHHHHHHCCCcEEEECcCHHH-HHH
Confidence 5789999999975432 235678889888899999999999877 543
No 113
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=89.99 E-value=0.27 Score=40.63 Aligned_cols=69 Identities=12% Similarity=0.120 Sum_probs=42.6
Q ss_pred hHHHHHhCCCeEEEEEecCCcceecCCCCEEEcCccccccc---cC-----CCchhhhcccCChHHHHHHHHHhhCCCEE
Q 019238 6 TIDVLRRSGADVVVASVEKQLRVDACHGVKIVADALVSNCR---DA-----CGMPGATNLKESEVLESIVKKQASDGRLY 77 (344)
Q Consensus 6 ~~~~l~~~~~~~~~vs~~~~~~v~~~~g~~~~~d~~~~~~~---~~-----gG~~~~~~~~~~~~~~~~l~~~~~~g~~i 77 (344)
..+.|++.|+++.++..+.. .++++. .. ||.......++.+...++++++ ++++++
T Consensus 17 ~~~~l~~~G~~~~v~~~~~~---------------~~~~~~~~~~dglil~gG~~~~~~~~~~~~~~~~i~~~-~~~~Pv 80 (195)
T 1qdl_B 17 IAQIVGELGSYPIVIRNDEI---------------SIKGIERIDPDRLIISPGPGTPEKREDIGVSLDVIKYL-GKRTPI 80 (195)
T ss_dssp HHHHHHHTTCEEEEEETTTS---------------CHHHHHHHCCSEEEECCCSSCTTSHHHHTTHHHHHHHH-TTTSCE
T ss_pred HHHHHHhCCCEEEEEeCCCC---------------CHHHHhhCCCCEEEECCCCCChhhhhhhhHHHHHHHHh-cCCCcE
Confidence 46778889999988876520 111111 11 4422222111123346888875 789999
Q ss_pred EEEchhHHHHHHHc
Q 019238 78 AAICVFLAVALGSW 91 (344)
Q Consensus 78 ~aiC~g~~~~La~a 91 (344)
.+||-|.- +|+.+
T Consensus 81 LGIC~G~Q-lL~~~ 93 (195)
T 1qdl_B 81 LGVCLGHQ-AIGYA 93 (195)
T ss_dssp EEETHHHH-HHHHH
T ss_pred EEEehHHH-HHHHH
Confidence 99999995 99987
No 114
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=89.36 E-value=0.5 Score=45.24 Aligned_cols=75 Identities=20% Similarity=0.206 Sum_probs=47.3
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCC
Q 019238 177 VIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNR 256 (344)
Q Consensus 177 ~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k 256 (344)
..+...++..|..++++..+. +.+++...++|.||++||......- ..+.+ .+...+.++
T Consensus 13 ~~i~r~l~~~G~~~~i~p~~~----------------~~~~i~~~~~dgiIlsGGp~s~~~~-~~~~~---~~~~~~~~~ 72 (503)
T 2ywb_A 13 RLIARRLRELRAFSLILPGDA----------------PLEEVLKHRPQALILSGGPRSVFDP-DAPRP---DPRLFSSGL 72 (503)
T ss_dssp HHHHHHHHTTTCCEEEEETTC----------------CHHHHHTTCCSEEEECCCSSCSSCT-TCCCC---CGGGGCSSC
T ss_pred HHHHHHHHHCCCEEEEEECCC----------------CHHHHHhcCCCEEEECCCCchhccC-CCcch---HHHHHhCCC
Confidence 557788999998877665432 1233322356999999996432211 11111 234457899
Q ss_pred cEEEEcchhhhhhhhc
Q 019238 257 PYGAICASPALVLEPH 272 (344)
Q Consensus 257 ~I~aic~G~~~lLa~a 272 (344)
||.+||-|..+ |+.+
T Consensus 73 PvLGIC~G~Ql-la~~ 87 (503)
T 2ywb_A 73 PLLGICYGMQL-LAQE 87 (503)
T ss_dssp CEEEETHHHHH-HHHT
T ss_pred CEEEECHHHHH-HHHH
Confidence 99999999776 6653
No 115
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=88.09 E-value=0.27 Score=41.66 Aligned_cols=30 Identities=10% Similarity=-0.031 Sum_probs=26.8
Q ss_pred hHHHHHHHHHhhC-CCEEEEEchhHHHHHHHc
Q 019238 61 EVLESIVKKQASD-GRLYAAICVFLAVALGSW 91 (344)
Q Consensus 61 ~~~~~~l~~~~~~-g~~i~aiC~g~~~~La~a 91 (344)
..+.++|+++.++ |++|.+||.|.. +|+++
T Consensus 66 ~~~~~~i~~~~~~~g~PilGIC~G~Q-lL~~~ 96 (227)
T 2abw_A 66 DTLYNALVHFIHVLKKPIWGTCAGCI-LLSKN 96 (227)
T ss_dssp HHHHHHHHHHHHTSCCCEEEETHHHH-HTEEE
T ss_pred HHHHHHHHHHHHhcCCEEEEECHHHH-HHHHH
Confidence 5678999999999 999999999995 88875
No 116
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=83.84 E-value=1.8 Score=36.91 Aligned_cols=29 Identities=10% Similarity=0.096 Sum_probs=26.2
Q ss_pred HHHHHHHHHhhCCCEEEEEchhHHHHHHHc
Q 019238 62 VLESIVKKQASDGRLYAAICVFLAVALGSW 91 (344)
Q Consensus 62 ~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (344)
...++|++..++++|+.+||-|.- +|+.+
T Consensus 81 ~~~~~i~~~~~~~~PiLGIC~G~Q-lL~~a 109 (239)
T 1o1y_A 81 YEFQLIEEILKKEIPFLGICLGSQ-MLAKV 109 (239)
T ss_dssp HHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEchhHH-HHHHH
Confidence 678999999899999999999995 99987
No 117
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=83.66 E-value=4.6 Score=34.83 Aligned_cols=85 Identities=11% Similarity=-0.010 Sum_probs=54.7
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
.|+||+|+- ..........+.+.|+..|+++++++.+.- + .+.++. .+||+||++.-. ...
T Consensus 3 ~m~~vLiV~-g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~-~------------~~~~~L--~~yDvIIl~d~~--~~~- 63 (259)
T 3rht_A 3 AMTRVLYCG-DTSLETAAGYLAGLMTSWQWEFDYIPSHVG-L------------DVGELL--AKQDLVILSDYP--AER- 63 (259)
T ss_dssp ---CEEEEE-SSCTTTTHHHHHHHHHHTTCCCEEECTTSC-B------------CSSHHH--HTCSEEEEESCC--GGG-
T ss_pred CCceEEEEC-CCCchhHHHHHHHHHHhCCceEEEeccccc-c------------cChhHH--hcCCEEEEcCCc--ccc-
Confidence 367888773 222344666788899999999998877641 1 023444 789999998532 122
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
-++.-++.|+++.++|.-+..+..
T Consensus 64 -l~~~~~~~L~~yV~~GGgLi~~gG 87 (259)
T 3rht_A 64 -MTAQAIDQLVTMVKAGCGLVMLGG 87 (259)
T ss_dssp -BCHHHHHHHHHHHHTTCEEEEECS
T ss_pred -CCHHHHHHHHHHHHhCCeEEEecC
Confidence 255667777777777877777753
No 118
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=82.47 E-value=0.55 Score=39.25 Aligned_cols=31 Identities=10% Similarity=0.180 Sum_probs=26.3
Q ss_pred CChHHHHHHHHHhhCCCEEEEEchhHHHHHHH
Q 019238 59 ESEVLESIVKKQASDGRLYAAICVFLAVALGS 90 (344)
Q Consensus 59 ~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~ 90 (344)
+...+.+.|++..++|+++.++|.|+. +|++
T Consensus 98 ~~~gl~~~l~~~~~~G~p~~G~sAGa~-~l~~ 128 (206)
T 3l4e_A 98 KRTGADKLILEEIAAGKLYIGESAGAV-ITSP 128 (206)
T ss_dssp HHHTHHHHHHHHHHTTCEEEEETHHHH-TTSS
T ss_pred HHCChHHHHHHHHHcCCeEEEECHHHH-Hhcc
Confidence 456788899999999999999999995 6654
No 119
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=80.04 E-value=3.8 Score=32.32 Aligned_cols=90 Identities=14% Similarity=0.076 Sum_probs=50.5
Q ss_pred CeEEEEeCC--CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 161 PQILVPIAN--GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 161 ~~v~ill~~--g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
|||.|+-+. |....=.-.+.+.+...|++++++....- . +.....++ .+||.|++...... ..+
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~-~----------~~~~~~~~--~~~d~ii~Gspty~-g~~ 66 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRAV-D----------PQELIEAV--SSARGIVLGTPPSQ-PSE 66 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTTC-C----------HHHHHHHH--HHCSEEEEECCBSS-CCH
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HhCCEEEEEcCCcC-Cch
Confidence 466666655 44443344567778888888877766541 1 11112223 47899988654221 122
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchh
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASP 265 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~ 265 (344)
+. ..+++.+....-++|+++.++++.
T Consensus 67 p~-~~fl~~l~~~~l~gk~v~~fgs~g 92 (161)
T 3hly_A 67 AV-ATALSTIFAAAHNKQAIGLFDSYG 92 (161)
T ss_dssp HH-HHHHHHHHHHCCTTSEEEEECCCC
T ss_pred hH-HHHHHHHHhhhhCCCEEEEEEcCC
Confidence 22 445554444334789999998764
No 120
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=79.21 E-value=1.5 Score=35.64 Aligned_cols=25 Identities=16% Similarity=0.129 Sum_probs=20.5
Q ss_pred HHHHHHHHhhCCCEEEEEchhHHHHHHHc
Q 019238 63 LESIVKKQASDGRLYAAICVFLAVALGSW 91 (344)
Q Consensus 63 ~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (344)
+.++++ ++++|+.+||.|.. +|+.+
T Consensus 60 ~~~~i~---~~~~PilGIC~G~Q-ll~~~ 84 (186)
T 2ywj_A 60 LLEKIK---NSNLPILGTCAGMV-LLSKG 84 (186)
T ss_dssp HHHHHH---TCCCCEEEETHHHH-HHSSC
T ss_pred HHHHHH---hcCCcEEEECHHHH-HHHHH
Confidence 445555 78899999999995 89887
No 121
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=76.87 E-value=4.8 Score=35.12 Aligned_cols=87 Identities=22% Similarity=0.266 Sum_probs=48.0
Q ss_pred eeeeccceeeecCC--CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCc
Q 019238 146 TIAEFNPVQWTFDN--SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSY 223 (344)
Q Consensus 146 ~l~~~~~~~~~~~~--~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~ 223 (344)
.+.......|.... .|||+|+.-++-. ...+.+.|++.|+++.+..... . .. .+.
T Consensus 13 ~~~~~~~~~~~~~~~~~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~~~~~~--~----------------~~--~~~ 69 (278)
T 1z0s_A 13 DIPTTENLYFQGGGGGGMRAAVVYKTDGH---VKRIEEALKRLEVEVELFNQPS--E----------------EL--ENF 69 (278)
T ss_dssp -----------------CEEEEEESSSTT---HHHHHHHHHHTTCEEEEESSCC--G----------------GG--GGS
T ss_pred CCCccceEEEcCCCccceEEEEEeCCcHH---HHHHHHHHHHCCCEEEEccccc--c----------------cc--CCC
Confidence 33344445555433 5789988776554 6667888999998876533211 0 11 367
Q ss_pred cEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchh
Q 019238 224 DLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASP 265 (344)
Q Consensus 224 D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~ 265 (344)
|++++.||.+. ++.-.+.+... .||.++-.|.
T Consensus 70 DlvIvlGGDGT---------~L~aa~~~~~~-~PilGIN~G~ 101 (278)
T 1z0s_A 70 DFIVSVGGDGT---------ILRILQKLKRC-PPIFGINTGR 101 (278)
T ss_dssp SEEEEEECHHH---------HHHHHTTCSSC-CCEEEEECSS
T ss_pred CEEEEECCCHH---------HHHHHHHhCCC-CcEEEECCCC
Confidence 99999999543 33334444445 8999998875
No 122
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=76.74 E-value=4.5 Score=34.66 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=26.7
Q ss_pred hHHHHHHHHHhhCCCEEEEEchhHHHHHHHc
Q 019238 61 EVLESIVKKQASDGRLYAAICVFLAVALGSW 91 (344)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (344)
...+.++++..++++++.+||-|-. +|+.+
T Consensus 95 ~~~~~lir~a~~~~~PiLGIC~G~Q-ll~~a 124 (254)
T 3fij_A 95 SYEIALVRAALDAGKPIFAICRGMQ-LVNVA 124 (254)
T ss_dssp HHHHHHHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECHHHH-HHHHH
Confidence 4478999999999999999999995 89887
No 123
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=74.87 E-value=3.1 Score=32.12 Aligned_cols=86 Identities=14% Similarity=0.255 Sum_probs=49.6
Q ss_pred CCeEEEEeCC--CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCC-CccEEEEcCCccch-
Q 019238 160 SPQILVPIAN--GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKL-SYDLIVLPGGLGGA- 235 (344)
Q Consensus 160 ~~~v~ill~~--g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~-~~D~liipGG~~~~- 235 (344)
|+||.|+-+. |....=.-.+.+.+...|++++++....- ..++. . ++|.+++.......
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~~d~ii~g~pty~~~ 63 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA---------------SAENL--ADGYDAVLFGCSAWGME 63 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB---------------CCTTT--TTTCSEEEEEECEECSS
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC---------------CHhHh--cccCCEEEEEecccCCC
Confidence 3677777665 33333333456667777888887776541 12233 4 78988886542111
Q ss_pred -HhhhcCHHHHHHHHHHH---hcCCcEEEEcch
Q 019238 236 -QAFAKSKKLVNMLKKQK---ESNRPYGAICAS 264 (344)
Q Consensus 236 -~~l~~~~~l~~~l~~~~---~~~k~I~aic~G 264 (344)
.. -.+.+.+|+++.. -+++.++.+++|
T Consensus 64 ~G~--~p~~~~~fl~~l~~~~l~~k~~~vfg~G 94 (148)
T 3f6r_A 64 DLE--MQDDFLSLFEEFDRIGLAGRKVAAFASG 94 (148)
T ss_dssp SCE--ECHHHHHHHTTGGGTCCTTCEEEEEEEE
T ss_pred CCC--CcHHHHHHHHHhhccCCCCCEEEEEEeC
Confidence 01 2345666666543 357888888776
No 124
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=74.41 E-value=7 Score=31.51 Aligned_cols=84 Identities=13% Similarity=0.075 Sum_probs=51.9
Q ss_pred CCeEEEEeCCCcc--hhHHHHHHHHHHh-cCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 160 SPQILVPIANGSE--EMEAVIIIDILRR-AKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 160 ~~~v~ill~~g~~--~~e~~~~~~~l~~-~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
|+||.|+.+...- ..=.-.+.+.+.. .|.+++++....- . .+++ .++|.|++..-. .
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~-~--------------~~~l--~~aD~ii~gsP~---y 63 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEA-T--------------KEDV--LWADGLAVGSPT---N 63 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTC-C--------------HHHH--HHCSEEEEEEEC---B
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhC-C--------------HHHH--HhCCEEEEEeCc---c
Confidence 5688888776332 2222345566666 7778877776542 1 3444 578999985431 1
Q ss_pred hhhcCHHHHHHHHHHHh------cCCcEEEEcc
Q 019238 237 AFAKSKKLVNMLKKQKE------SNRPYGAICA 263 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~------~~k~I~aic~ 263 (344)
.-.-.+.+..||.+... ++|+++.+++
T Consensus 64 ~g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t 96 (188)
T 2ark_A 64 MGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSS 96 (188)
T ss_dssp TTBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEE
T ss_pred CCcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEE
Confidence 11235567788887654 6888887776
No 125
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=73.14 E-value=9.4 Score=30.81 Aligned_cols=100 Identities=13% Similarity=0.041 Sum_probs=52.7
Q ss_pred CCeEEEEeCCC--cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeec---cce--eeeeccccccccCCCccEEEEcCCc
Q 019238 160 SPQILVPIANG--SEEMEAVIIIDILRRAKANVVVASVADKLEILAS---CQV--KLVADMLIDEAAKLSYDLIVLPGGL 232 (344)
Q Consensus 160 ~~~v~ill~~g--~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~---~g~--~v~~~~~~~~~~~~~~D~liipGG~ 232 (344)
|+||.|+.+.. ....=.-.+.+.+...|.+++++..... ...+. ... ...+....+++ .++|.|++..-.
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l--~~aD~ii~gsP~ 81 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAV-STECEAVAPDIPAEGALYATLEDL--KNCAGLALGSPT 81 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCCE-EC-------------CCBCCHHHH--HTCSEEEEEEEC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhhc-cchhhhhccccccccCchhhHHHH--HHCCEEEEEcCh
Confidence 46888888763 2222233456667777888888877541 11111 000 00111123334 678999985431
Q ss_pred cchHhhhcCHHHHHHHHHHH-------hcCCcEEEEcchh
Q 019238 233 GGAQAFAKSKKLVNMLKKQK-------ESNRPYGAICASP 265 (344)
Q Consensus 233 ~~~~~l~~~~~l~~~l~~~~-------~~~k~I~aic~G~ 265 (344)
. ...-.+.+..||.+.. -++|+++.++++.
T Consensus 82 y---~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g 118 (200)
T 2a5l_A 82 R---FGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTA 118 (200)
T ss_dssp B---TTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBS
T ss_pred h---ccCccHHHHHHHHHHHHHhhccccCCCEEEEEEecC
Confidence 1 1123455666666653 2678888777653
No 126
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=73.09 E-value=15 Score=36.05 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC----ccchHhhhcCHHHHHHHHH
Q 019238 175 EAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG----LGGAQAFAKSKKLVNMLKK 250 (344)
Q Consensus 175 e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG----~~~~~~l~~~~~l~~~l~~ 250 (344)
+..++++.|..+++++++++-+. . ...-...+||+||-+|- +.+ .....++...+.||+
T Consensus 469 sy~GilEALsg~~~dV~FIsfdD--I--------------~e~e~L~d~DVIIn~G~A~TalSg-g~~W~~p~~~~aLR~ 531 (759)
T 2zuv_A 469 SYYGILESLSGMRVNVRFISFDD--V--------------LAHGIDSDIDVIINGGPVDTAFTG-GDVWTNPKLVETVRA 531 (759)
T ss_dssp HHHHHHHHHHTSSSEEEEEEHHH--H--------------HHHCCCTTCCEEEEEECTTSTTTC-GGGGGCHHHHHHHHH
T ss_pred cHHHHHHHHhcCCCceEEecHHH--h--------------ccccccccCCEEEecCcchhcccC-ccccCCHHHHHHHHH
Confidence 55779999999999999998764 0 11012378999999982 111 123557999999999
Q ss_pred HHhcCCcEEEEcch
Q 019238 251 QKESNRPYGAICAS 264 (344)
Q Consensus 251 ~~~~~k~I~aic~G 264 (344)
+..+|.-+.+++.=
T Consensus 532 fV~~GGgLIgVGep 545 (759)
T 2zuv_A 532 WVRGGGAFVGVGEP 545 (759)
T ss_dssp HHHTTCEEEEEEST
T ss_pred HHHcCCcEEEeCCc
Confidence 99999988888843
No 127
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=72.24 E-value=15 Score=28.70 Aligned_cols=92 Identities=13% Similarity=0.050 Sum_probs=53.4
Q ss_pred CCeEEEEeCC--CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 160 SPQILVPIAN--GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 160 ~~~v~ill~~--g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
.++|.|+-+. |....=.-.+.+.+...|.+++++..... + .++....++ .+||.|++...... ..
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~-~---------~~~~~~~~~--~~~d~ii~Gspty~-g~ 70 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAA-V---------DLQELRELV--GRCTGLVIGMSPAA-SA 70 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSC-C---------CHHHHHHHH--HTEEEEEEECCBTT-SH
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCc-C---------CHHHHHHHH--HhCCEEEEEcCcCC-CC
Confidence 3577777665 44443344567778888888887766531 0 011112333 57999999654221 12
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchh
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASP 265 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~ 265 (344)
++ ...+++.+.....++|+++.++++.
T Consensus 71 ~p-~~~~l~~l~~~~~~~k~va~fgs~g 97 (159)
T 3fni_A 71 AS-IQGALSTILGSVNEKQAVGIFETGG 97 (159)
T ss_dssp HH-HHHHHHHHHHHCCTTSEEEEECCSS
T ss_pred cc-HHHHHHHHHhhcccCCEEEEEEcCC
Confidence 22 1445555544445789999998764
No 128
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=71.95 E-value=9.8 Score=33.56 Aligned_cols=95 Identities=17% Similarity=0.214 Sum_probs=48.2
Q ss_pred CCeEEEEeCCCcch--hHHHHHHHHHHhcCCeEEEEEeCCCceee---e------ccceeeeeccccccccCCCccEEEE
Q 019238 160 SPQILVPIANGSEE--MEAVIIIDILRRAKANVVVASVADKLEIL---A------SCQVKLVADMLIDEAAKLSYDLIVL 228 (344)
Q Consensus 160 ~~~v~ill~~g~~~--~e~~~~~~~l~~~~~~v~~~s~~~~~~v~---~------~~g~~v~~~~~~~~~~~~~~D~lii 228 (344)
++||+|+.-++-.. .-+..+.+.|++.|+++.+...... ... . ..|..+.. ..-.+....++|++++
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~d~vi~ 81 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAV-DRGSLHLAPDDMRAMGVEIEV-VDADQHAADGCELVLV 81 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CCCEEE
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh-hhhcccccccccccccccccc-cccccccccCCCEEEE
Confidence 57899888775532 2355677888999998776544331 110 0 00100110 0001112357899999
Q ss_pred cCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchh
Q 019238 229 PGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASP 265 (344)
Q Consensus 229 pGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~ 265 (344)
.||.+. ++.-++.+...+.++.+|-.|.
T Consensus 82 ~GGDGT---------~l~a~~~~~~~~~pvlgi~~G~ 109 (307)
T 1u0t_A 82 LGGDGT---------FLRAAELARNASIPVLGVNLGR 109 (307)
T ss_dssp EECHHH---------HHHHHHHHHHHTCCEEEEECSS
T ss_pred EeCCHH---------HHHHHHHhccCCCCEEEEeCCC
Confidence 999653 3444455555578888887664
No 129
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=70.61 E-value=5 Score=33.34 Aligned_cols=21 Identities=14% Similarity=0.066 Sum_probs=18.0
Q ss_pred HhhCCCEEEEEchhHHHHHHHc
Q 019238 70 QASDGRLYAAICVFLAVALGSW 91 (344)
Q Consensus 70 ~~~~g~~i~aiC~g~~~~La~a 91 (344)
..++++++.+||-|.- +|+.+
T Consensus 81 ~~~~~~PiLGIC~G~Q-ll~~~ 101 (212)
T 2a9v_A 81 IDDHNYPILGICVGAQ-FIALH 101 (212)
T ss_dssp HHHCCSCEEEETHHHH-HHHHH
T ss_pred HHhCCCCEEEEChHHH-HHHHH
Confidence 3478999999999995 89887
No 130
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=70.47 E-value=0.8 Score=38.10 Aligned_cols=28 Identities=14% Similarity=0.246 Sum_probs=22.2
Q ss_pred HHHHHHhhCCCEEEEEchhHHHHHHHcCC
Q 019238 65 SIVKKQASDGRLYAAICVFLAVALGSWGL 93 (344)
Q Consensus 65 ~~l~~~~~~g~~i~aiC~g~~~~La~aGl 93 (344)
.+++...+.++|+.+||-|-- +|+.+.-
T Consensus 63 ~~i~~~~~~~~PvlGIClG~Q-lL~~~~g 90 (211)
T 4gud_A 63 DLIELVKRVEKPLLGICLGMQ-LLGKLSE 90 (211)
T ss_dssp TCHHHHHHCCSCEEEETHHHH-TTSSEEC
T ss_pred ChHHHHHHcCCCEEEEchhHh-HHHHHhC
Confidence 456777789999999999994 8876543
No 131
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=69.88 E-value=9.7 Score=31.80 Aligned_cols=48 Identities=17% Similarity=0.312 Sum_probs=39.1
Q ss_pred chhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcC
Q 019238 172 EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG 230 (344)
Q Consensus 172 ~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipG 230 (344)
..+|...+.+.+...|.+++++|.+.+ +. ..+++++++..||-|+|..
T Consensus 19 p~setiyl~~~~~~mgl~vd~is~k~~--iy---------~~~fd~vd~n~ydr~~vvn 66 (351)
T 1jg7_A 19 PSSETIYLFKVISEMGLNVDIISLKNG--VY---------TKSFDEVDVNDYDRLIVVN 66 (351)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESSCC--SS---------EEEGGGSCGGGCSEEEEEC
T ss_pred CccceeeHHHHHHHcCCCeeEEEeccc--ee---------eeecccCCccccceEEEEe
Confidence 567888899999999999999999875 21 2357888889999998864
No 132
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=69.40 E-value=6.7 Score=30.94 Aligned_cols=93 Identities=13% Similarity=0.132 Sum_probs=56.2
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCe--EEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCcc--ch
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKAN--VVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLG--GA 235 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~--v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~--~~ 235 (344)
+.||+|+...-....-+....+.|.+.|.. +.++.+.|- .-+.+.... +... .+||++|..|-.+ ..
T Consensus 2 ~~ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VPGa------fEiP~aak~-la~~--~~yDavIaLG~VG~T~H 72 (156)
T 2b99_A 2 TKKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGI------KDLPVACKK-LLEE--EGCDIVMALGMPGKAEK 72 (156)
T ss_dssp CCEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESSG------GGHHHHHHH-HHHH--SCCSEEEEEECCCSSHH
T ss_pred CcEEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECCcH------HHHHHHHHH-HHhc--CCCCEEEEecccCCcch
Confidence 468999987644455557889999999854 333455441 222222222 2222 6799999887432 22
Q ss_pred HhhhcCHHHHHHHHHHHhcCCcEEEE
Q 019238 236 QAFAKSKKLVNMLKKQKESNRPYGAI 261 (344)
Q Consensus 236 ~~l~~~~~l~~~l~~~~~~~k~I~ai 261 (344)
..+-.+.....+.+-..+.++||+.-
T Consensus 73 fd~Va~~vs~Gl~~v~L~~~vPV~~g 98 (156)
T 2b99_A 73 DKVCAHEASLGLMLAQLMTNKHIIEV 98 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHHHHHHHHHHhhhCCCEEEE
Confidence 33445555666667677888887754
No 133
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=65.52 E-value=2.4 Score=33.27 Aligned_cols=106 Identities=13% Similarity=0.099 Sum_probs=64.6
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCC---c-eeeeccceeeeeccccccccCCCccEEEEcCCccc
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADK---L-EILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG 234 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~---~-~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~ 234 (344)
...+|.++=.+|++.. ++.+... .-.+-+..++....- + -..+..|+.+.-... .+.|+|++-||.+.
T Consensus 25 ~~~kIvf~Gs~GvCtP-FaeL~~Y-aiR~~~~~FiP~~d~e~a~~l~~~~~G~~~~~~~~------~~~D~vVllGGLAM 96 (157)
T 2r47_A 25 DAERIGFAGVPGVCTP-FAQLFAY-AVRDKDNIFIPNTDFSKARKLEVTEYGVELGEISP------GNVDVLVLLGGLSM 96 (157)
T ss_dssp TCSEEEEEECTTTTHH-HHHHHHH-HTTTSEEEEEETTCGGGCEEEEEETTEEEEEEECC------CCEEEEEEEGGGGS
T ss_pred CCCeEEEECCCeeecC-HHhhhee-eeeCCceEEcCCCChhHceEEEEecCceEeccccC------CCCCEEEEeccccC
Confidence 3689999999999863 2222222 112234444433210 0 122345655433321 37899999999865
Q ss_pred hHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCC
Q 019238 235 AQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGL 274 (344)
Q Consensus 235 ~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGl 274 (344)
+..-...+.+.+.|.+..+..+-|.++|-=+ + +.++|.
T Consensus 97 Pk~~v~~e~v~~li~ki~~~~~kiiGvCFms-~-F~kagW 134 (157)
T 2r47_A 97 PGIGSDIEDVKKLVEDALEEGGELMGLCYMD-M-FARAGW 134 (157)
T ss_dssp TTTSCCHHHHHHHHHHHEEEEEEEEEEEETT-H-HHHTTH
T ss_pred CCCCCCHHHHHHHHHHhhcCCCCEEEEEhHH-H-HHHcCC
Confidence 5443455678889998876666799999875 4 677774
No 134
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=65.11 E-value=2.7 Score=34.46 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=25.6
Q ss_pred HHHHHHHHHhhCCCEEEEEchhHHHHHHHcC
Q 019238 62 VLESIVKKQASDGRLYAAICVFLAVALGSWG 92 (344)
Q Consensus 62 ~~~~~l~~~~~~g~~i~aiC~g~~~~La~aG 92 (344)
.+.++|+++.++++++.+||.|.. +|+.+.
T Consensus 65 ~~~~~i~~~~~~~~PilGIC~G~Q-ll~~~~ 94 (201)
T 1gpw_B 65 DLIDFVRKHVEDERYVVGVCLGMQ-LLFEES 94 (201)
T ss_dssp TCHHHHHHHHHTTCEEEEETHHHH-TTSSEE
T ss_pred CHHHHHHHHHHcCCeEEEEChhHH-HHHHhh
Confidence 367899999999999999999995 887754
No 135
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=64.88 E-value=29 Score=26.40 Aligned_cols=86 Identities=17% Similarity=0.188 Sum_probs=46.4
Q ss_pred CeEEEEeCC--CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 161 PQILVPIAN--GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 161 ~~v~ill~~--g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
+||.|+-+. |....=.-.+.+.+...+++++.+... ...+. .+||.|++.....+...+
T Consensus 2 ~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~-----------------~~~~l--~~~d~vi~g~pt~g~g~~ 62 (147)
T 2hna_A 2 ADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGP-----------------LLEDL--PASGIWLVISSTHGAGDI 62 (147)
T ss_dssp CSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEECCT-----------------TSCSS--CSEEEEEEECCTTTTCCT
T ss_pred CeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEecCC-----------------CHHHc--ccCCeEEEEECccCCCCC
Confidence 566666554 444433345566677777777654210 12333 678988886542211122
Q ss_pred -hcCHHHHHHHHHH--HhcCCcEEEEcchh
Q 019238 239 -AKSKKLVNMLKKQ--KESNRPYGAICASP 265 (344)
Q Consensus 239 -~~~~~l~~~l~~~--~~~~k~I~aic~G~ 265 (344)
..-..++++++.. .-+++.++.++.|.
T Consensus 63 p~~~~~f~~~l~~~~~~l~~~~~avfg~G~ 92 (147)
T 2hna_A 63 PDNLSPFYEALQEQKPDLSAVRFGAIGIGS 92 (147)
T ss_dssp TSSCHHHHHHHHHHCCCTTEEEEEEESCCH
T ss_pred ChhHHHHHHHHHhhccccCCCEEEEEeccc
Confidence 2234566666653 23467777777663
No 136
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=63.87 E-value=9.8 Score=29.01 Aligned_cols=88 Identities=17% Similarity=0.234 Sum_probs=45.7
Q ss_pred CeEEEEeCC--CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCC-ccEEEEcCCccchHh
Q 019238 161 PQILVPIAN--GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQA 237 (344)
Q Consensus 161 ~~v~ill~~--g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~-~D~liipGG~~~~~~ 237 (344)
|||.|+-+. |....=.-.+.+.+...|++++++....- ...+. .+ +|.|++.........
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~~d~ii~~~p~y~~g~ 63 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASV---------------EAGGL--FEGFDLVLLGCSTWGDDS 63 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGGGC---------------CSTTT--TTTCSEEEEEECEECSSS
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEehhhC---------------CHHHh--cCcCCEEEEEeCCCCCCC
Confidence 466666554 33322223445666767888877665431 11233 56 899988653211101
Q ss_pred hhcCHHHHHHHHHHH---hcCCcEEEEcchh
Q 019238 238 FAKSKKLVNMLKKQK---ESNRPYGAICASP 265 (344)
Q Consensus 238 l~~~~~l~~~l~~~~---~~~k~I~aic~G~ 265 (344)
-.-...+..|+++.. -+++.++.+|+|.
T Consensus 64 ~~~p~~~~~fl~~l~~~~l~~k~~~v~~~g~ 94 (147)
T 1f4p_A 64 IELQDDFIPLFDSLEETGAQGRKVACFGCGD 94 (147)
T ss_dssp CEECTTTHHHHHTGGGSCCTTCEEEEEEEEC
T ss_pred cCCChhHHHHHHHHHhcccCCCEEEEEeecC
Confidence 001224455555432 3578888888763
No 137
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=63.23 E-value=20 Score=32.74 Aligned_cols=90 Identities=10% Similarity=0.050 Sum_probs=53.2
Q ss_pred CCeEEEEeCCCc--chhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 160 SPQILVPIANGS--EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 160 ~~~v~ill~~g~--~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
++||.|+-+... ...=+-.+.+.+...|++++++..... . .....+++ .++|.|++..... .
T Consensus 256 ~~kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~-~----------~~~~~~~l--~~~D~iiigsP~y---~ 319 (414)
T 2q9u_A 256 QKKVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSS-D----------ITKVALHT--YDSGAVAFASPTL---N 319 (414)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGC-C----------HHHHHHHH--HTCSEEEEECCCB---T
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcC-C----------HHHHHHHH--HhCCEEEEEcCcc---C
Confidence 578988877643 222233456667777888877766431 1 01112244 6799999976421 1
Q ss_pred hhcCHHHHHHHHHHH---h-cCCcEEEEcchh
Q 019238 238 FAKSKKLVNMLKKQK---E-SNRPYGAICASP 265 (344)
Q Consensus 238 l~~~~~l~~~l~~~~---~-~~k~I~aic~G~ 265 (344)
....+.+..||.+.. . ++|+++.++++.
T Consensus 320 ~~~~~~~k~fld~l~~~~~~~~K~~~~~~t~g 351 (414)
T 2q9u_A 320 NTMMPSVAAALNYVRGLTLIKGKPAFAFGAFG 351 (414)
T ss_dssp TBCCHHHHHHHHHHHHHTTTTTSBEEEEEEES
T ss_pred cCchHHHHHHHHHHHhhcccCCCEEEEEEecC
Confidence 122344666666544 3 789999888764
No 138
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=62.08 E-value=24 Score=27.79 Aligned_cols=92 Identities=16% Similarity=0.182 Sum_probs=58.8
Q ss_pred CCCeEEEEeCCCcch---hHHHHHHHHHHhcC-C---eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC
Q 019238 159 NSPQILVPIANGSEE---MEAVIIIDILRRAK-A---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 159 ~~~~v~ill~~g~~~---~e~~~~~~~l~~~~-~---~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG 231 (344)
...||+|+...-... .-+....+.|.+.| . +++++.+.|- .-+.+.... +... .+||+++..|-
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGa------fEiP~aa~~-la~~--~~yDavIaLG~ 81 (156)
T 3nq4_A 11 PDARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGA------YELPLATEA-LAKS--GKYDAVVALGT 81 (156)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESST------TTHHHHHHH-HHHH--CSCSEEEEEEE
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcH------HHHHHHHHH-HHhc--CCCCEEEEeee
Confidence 458999999875443 55668899999998 5 6888877663 112222222 2222 57999998773
Q ss_pred ----ccchHhhhcCHHHHHHHHHHHhcCCcEE
Q 019238 232 ----LGGAQAFAKSKKLVNMLKKQKESNRPYG 259 (344)
Q Consensus 232 ----~~~~~~l~~~~~l~~~l~~~~~~~k~I~ 259 (344)
......+-.+.....+.+-..+.++||+
T Consensus 82 VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~ 113 (156)
T 3nq4_A 82 VIRGGTAHFEYVAGGASNGLASVAQDSGVPVA 113 (156)
T ss_dssp EECCSSTHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred eecCCchHHHHHHHHHHHHHHHHHhccCCCEE
Confidence 1223344455566667777778888876
No 139
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=61.81 E-value=19 Score=29.30 Aligned_cols=100 Identities=10% Similarity=0.059 Sum_probs=53.4
Q ss_pred CCCeEEEEeCCC--cchhHHHHHHHHHHhcCCeEEEEEeCCCceeee---cccee-----ee---eccccccccCCCccE
Q 019238 159 NSPQILVPIANG--SEEMEAVIIIDILRRAKANVVVASVADKLEILA---SCQVK-----LV---ADMLIDEAAKLSYDL 225 (344)
Q Consensus 159 ~~~~v~ill~~g--~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~---~~g~~-----v~---~~~~~~~~~~~~~D~ 225 (344)
.++||+|+.+.. ....=+-.+.+.+...|.+++++..... ...+ ..+.. .. +....+++ .++|.
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l--~~aD~ 81 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRET-APQDVIDGQDAWKANIEAMKDVPEATPADL--EWAEA 81 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCCC-SCHHHHTTCHHHHHHHHHTTTSCBCCHHHH--HHCSE
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecccc-ccchhhhcccccccccccccchhHHHHHHH--HHCCE
Confidence 467898888763 3333333556667777889888877551 1000 00000 00 11223344 57899
Q ss_pred EEEcCCccchHhhhcCHHHHHHHHHHH-------hcCCcEEEEcch
Q 019238 226 IVLPGGLGGAQAFAKSKKLVNMLKKQK-------ESNRPYGAICAS 264 (344)
Q Consensus 226 liipGG~~~~~~l~~~~~l~~~l~~~~-------~~~k~I~aic~G 264 (344)
||+..-. ....-...+..||.+.. -++|+++.++++
T Consensus 82 ii~gsP~---y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~ 124 (211)
T 1ydg_A 82 IVFSSPT---RFGGATSQMRAFIDTLGGLWSSGKLANKTFSAMTSA 124 (211)
T ss_dssp EEEEEEE---ETTEECHHHHHHHHTTHHHHHTTTTTTCEEEEEEEE
T ss_pred EEEEcCc---cccCccHHHHHHHHHhccccccccCCCCEEEEEEeC
Confidence 9986431 11123455666666643 357777766654
No 140
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=61.43 E-value=18 Score=33.06 Aligned_cols=140 Identities=17% Similarity=0.164 Sum_probs=76.5
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
..+|+.|+.-++....-...+.+.|..+|+++.++...++.+-.+.....-..+ .+.+...++-|.||-.|| +..-+
T Consensus 61 ~~~rvlIVtd~~v~~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~-~l~~~~~~R~d~IIAvGG-Gsv~D- 137 (390)
T 3okf_A 61 AKQKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMS-FLLEHNYSRDVVVIALGG-GVIGD- 137 (390)
T ss_dssp TTCEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHH-HHHHTTCCTTCEEEEEES-HHHHH-
T ss_pred CCCEEEEEECCcHHHHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHH-HHHhcCCCcCcEEEEECC-cHHhh-
Confidence 357888888888877655567788889999887665544423222111000000 111112234478888887 32322
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCC-CCCCeeeeCcCchhhhccCCcCCCcEEEeCCeEeCC
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGL-LKGKKATAFPAMCNKLSNQSEIENRVVVDGNLVTSR 310 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGl-L~g~~~T~~~~~~~~~~~~~~~~~~~v~dg~liT~~ 310 (344)
+-.++...+.+|.++..+-+- + |+..+- ..|+..-.++..+. +...+.....++.|-.++.+-
T Consensus 138 -----~ak~~Aa~~~rgip~I~IPTT--l-la~vDssvggkt~I~~~~~Kn-~ig~f~~P~~ViiD~~~l~tl 201 (390)
T 3okf_A 138 -----LVGFAAACYQRGVDFIQIPTT--L-LSQVDSSVGGKTAVNHPLGKN-MIGAFYQPKAVVIDTDCLTTL 201 (390)
T ss_dssp -----HHHHHHHHBTTCCEEEEEECS--H-HHHHHTSSSCEEEEEETTEEE-EEEEECCCSEEEEEGGGGGGS
T ss_pred -----HHHHHHHHhcCCCCEEEeCCC--C-ccccccCcCCeEEEEcCCCce-EEeeccCCCEEEEcHHHHhhC
Confidence 344555567889999999985 2 554322 22333222232221 222345667788887766543
No 141
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=61.29 E-value=7.1 Score=34.20 Aligned_cols=29 Identities=0% Similarity=-0.198 Sum_probs=26.1
Q ss_pred hHHHHHHHHHhhCCCEEEEEchhHHHHHHH
Q 019238 61 EVLESIVKKQASDGRLYAAICVFLAVALGS 90 (344)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~La~ 90 (344)
+...++++++.++++|+.+||.|.. +|+.
T Consensus 106 ~~~~~~i~~~~~~~~PilGIC~G~Q-~l~~ 134 (289)
T 2v4u_A 106 LGKLQAISWARTKKIPFLGVXLGMQ-LAVI 134 (289)
T ss_dssp HHHHHHHHHHHHTTCCEEEETHHHH-HHHH
T ss_pred HHHHHHHHHHHHcCCcEEEECccHH-HHHH
Confidence 6788999999999999999999995 8875
No 142
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=60.28 E-value=28 Score=27.42 Aligned_cols=93 Identities=16% Similarity=0.117 Sum_probs=57.7
Q ss_pred CeEEEEeCCCcch---hHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeecccccc--ccCCCccEEEEcCCc---
Q 019238 161 PQILVPIANGSEE---MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDE--AAKLSYDLIVLPGGL--- 232 (344)
Q Consensus 161 ~~v~ill~~g~~~---~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~--~~~~~~D~liipGG~--- 232 (344)
.||+|+...-..+ .-+....+.|.+.|.+++++.+.|- .-+.+.......+ ....+||+++..|-.
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGa------fEiP~aa~~la~~~~~~~~~yDavIaLG~VIrG 86 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGA------LEIPATISFALDGADNGGTEYDGFVALGTVIRG 86 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSG------GGHHHHHHHHHHHHHTTCCCCSEEEEEEEEECC
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------HHHHHHHHHHHhhccccCCCCCEEEEeeeeecC
Confidence 7899999874443 5567888999999988888887662 1111111111111 012579999887631
Q ss_pred -cchHhhhcCHHHHHHHHHHHhcCCcEE
Q 019238 233 -GGAQAFAKSKKLVNMLKKQKESNRPYG 259 (344)
Q Consensus 233 -~~~~~l~~~~~l~~~l~~~~~~~k~I~ 259 (344)
.....+-.+.....+.+-..+.++||+
T Consensus 87 ~T~Hfd~Va~~v~~gl~~vsl~~~vPV~ 114 (157)
T 2i0f_A 87 ETYHFDIVSNESCRALTDLSVEESIAIG 114 (157)
T ss_dssp SSSTTHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CchHHHHHHHHHHHHHHHHHhhcCCCEE
Confidence 222334455566667777778888876
No 143
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=59.65 E-value=4.1 Score=34.36 Aligned_cols=33 Identities=12% Similarity=-0.047 Sum_probs=27.0
Q ss_pred ChHHHHHHHHHhhCCCEEEEEchhHHHHHHHcCC
Q 019238 60 SEVLESIVKKQASDGRLYAAICVFLAVALGSWGL 93 (344)
Q Consensus 60 ~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGl 93 (344)
...+.+.|++..++|+++.++|.|.. +|++...
T Consensus 99 ~~gl~~~l~~~~~~G~p~~G~sAG~~-~l~~~~~ 131 (229)
T 1fy2_A 99 ERGLLAPMADRVKRGALYIGWSAGAN-LACPTIR 131 (229)
T ss_dssp HTTCHHHHHHHHHTTCEEEEETHHHH-HTSSBST
T ss_pred HCChHHHHHHHHHcCCEEEEECHHHH-hhcccce
Confidence 35677889999999999999999995 7776543
No 144
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=58.25 E-value=22 Score=32.21 Aligned_cols=137 Identities=17% Similarity=0.061 Sum_probs=74.5
Q ss_pred CeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhc
Q 019238 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAK 240 (344)
Q Consensus 161 ~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~ 240 (344)
+|+.|+.-++.... ...+.+.|...|+++.++...++.+-.+.....-..+ .+.+....+.|.||-.|| +...+
T Consensus 44 ~rvlIVtd~~v~~~-~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~-~l~~~~~~r~d~IIavGG-Gsv~D--- 117 (368)
T 3qbe_A 44 HKVAVVHQPGLAET-AEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWE-VLGRIGIGRKDALVSLGG-GAATD--- 117 (368)
T ss_dssp SEEEEEECGGGHHH-HHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHH-HHHHHTCCTTCEEEEEES-HHHHH---
T ss_pred CEEEEEECccHHHH-HHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHH-HHHHcCCCCCcEEEEECC-hHHHH---
Confidence 78887777776664 5667788999999887666554322111111000000 111112245799998888 32332
Q ss_pred CHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCCCCCeeee-CcCchhhhccCCcCCCcEEEeCCeEeCC
Q 019238 241 SKKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATA-FPAMCNKLSNQSEIENRVVVDGNLVTSR 310 (344)
Q Consensus 241 ~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL~g~~~T~-~~~~~~~~~~~~~~~~~~v~dg~liT~~ 310 (344)
+-.++...+.+|.++..+-+- + ++...---|-+... ++.. ..+...+.....++.|-.++.+-
T Consensus 118 ---~ak~~Aa~~~rgip~i~IPTT--l-la~vDssvggkt~V~~~~~-Kn~ig~~~~P~~viiDp~~l~tl 181 (368)
T 3qbe_A 118 ---VAGFAAATWLRGVSIVHLPTT--L-LGMVDAAVGGKTGINTDAG-KNLVGAFHQPLAVLVDLATLQTL 181 (368)
T ss_dssp ---HHHHHHHHGGGCCEEEEEECS--H-HHHHTTTSSCEEEEEETTE-EEEEEEECCCSEEEEEGGGGGGS
T ss_pred ---HHHHHHHHhccCCcEEEECCC--C-ccccccCcCceEEEECCCC-ceeeccccCCCEEEEcHHHHhhC
Confidence 344555667889999999984 2 44322212223222 2221 12222445667778887766544
No 145
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=57.27 E-value=32 Score=27.43 Aligned_cols=100 Identities=15% Similarity=0.068 Sum_probs=52.5
Q ss_pred CCeEEEEeCCC--cchhHHHHHHHHHHh-cCCeEEEEEeCCCceee---eccce--eeeeccccccccCCCccEEEEcCC
Q 019238 160 SPQILVPIANG--SEEMEAVIIIDILRR-AKANVVVASVADKLEIL---ASCQV--KLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 160 ~~~v~ill~~g--~~~~e~~~~~~~l~~-~~~~v~~~s~~~~~~v~---~~~g~--~v~~~~~~~~~~~~~~D~liipGG 231 (344)
|+||.|+.+.. ....=.-.+.+.+.. .|.+++++..... ... +..+. ...+....+++ .++|.|++..-
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l--~~aD~ii~gsP 77 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPET-MPPQLFEKAGGKTQTAPVATPQEL--ADYDAIIFGTP 77 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCCC-SCHHHHHHTTCCCCCSCBCCGGGG--GGCSEEEEEEE
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEcccc-CchhhhhhcccccccCchhhHHHH--HHCCEEEEEeC
Confidence 36888887663 333333355666777 7888888877641 100 00111 00011113444 67999999543
Q ss_pred ccchHhhhcCHHHHHHHHHHH-------hcCCcEEEEcchh
Q 019238 232 LGGAQAFAKSKKLVNMLKKQK-------ESNRPYGAICASP 265 (344)
Q Consensus 232 ~~~~~~l~~~~~l~~~l~~~~-------~~~k~I~aic~G~ 265 (344)
. ....-.+.+..||.+.. -++|+++.++++.
T Consensus 78 ~---y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g 115 (198)
T 3b6i_A 78 T---RFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTG 115 (198)
T ss_dssp E---ETTEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEES
T ss_pred h---hcCCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeCC
Confidence 1 11122445555665542 3678888777653
No 146
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=56.87 E-value=52 Score=28.76 Aligned_cols=61 Identities=11% Similarity=-0.080 Sum_probs=36.8
Q ss_pred HHHHhhcccccccCCCcceeeeccceeeecCCCCeEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 128 ADEVSGARVMRANHGDEFTIAEFNPVQWTFDNSPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 128 a~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
..++.+.+.|.|+.... +....++++|++++.+ .|...-+..+.+.+.+.||++.+.....
T Consensus 45 V~~~~~~lgY~pn~~a~---------~l~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 108 (344)
T 3kjx_A 45 VLAAAKELGYVPNKIAG---------ALASNRVNLVAVIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDY 108 (344)
T ss_dssp HHHHHHHHTCCCCCCCS---------CSTTSCCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTT
T ss_pred HHHHHHHhCCCCCHHHH---------HhhcCCCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 34455566666543211 1122346799999865 3444445567777888899987766543
No 147
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=55.80 E-value=37 Score=26.61 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=58.3
Q ss_pred CCCeEEEEeCCCcch---hHHHHHHHHHHhcCC---eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCc
Q 019238 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL 232 (344)
Q Consensus 159 ~~~~v~ill~~g~~~---~e~~~~~~~l~~~~~---~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~ 232 (344)
...||+|+...-... .-+....+.|.+.|. +++++.+.|- .-+.+... .+.. ..+||+++..|-.
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGa------fEiP~aa~-~la~--~~~yDavIalG~V 81 (154)
T 1hqk_A 11 EGLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGS------WEIPVAAG-ELAR--KEDIDAVIAIGVL 81 (154)
T ss_dssp TTCCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSG------GGHHHHHH-HHHT--CTTCCEEEEEEEE
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHH-HHHh--cCCCCEEEEeeee
Confidence 357899999875444 556788899999985 5677777652 11122222 1222 2679999887632
Q ss_pred ----cchHhhhcCHHHHHHHHHHHhcCCcEEE
Q 019238 233 ----GGAQAFAKSKKLVNMLKKQKESNRPYGA 260 (344)
Q Consensus 233 ----~~~~~l~~~~~l~~~l~~~~~~~k~I~a 260 (344)
.....+-.+.....+.+-..+.++||+.
T Consensus 82 IrG~T~Hfd~Va~~vs~gl~~v~l~~~vPV~~ 113 (154)
T 1hqk_A 82 IRGATPHFDYIASEVSKGLANLSLELRKPITF 113 (154)
T ss_dssp ECCSSTHHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred ecCCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 2233444556666777777788898764
No 148
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=54.76 E-value=9.7 Score=34.78 Aligned_cols=32 Identities=13% Similarity=0.026 Sum_probs=28.1
Q ss_pred CChHHHHHHHHHhhCCCEEEEEchhHHHHHHHc
Q 019238 59 ESEVLESIVKKQASDGRLYAAICVFLAVALGSW 91 (344)
Q Consensus 59 ~~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (344)
++...+++++++.++++|+.+||-|-- +|+.+
T Consensus 246 ~~~~~~~~Ir~~~~~~~PILGIClG~Q-LLa~A 277 (379)
T 1a9x_B 246 PCDYAITAIQKFLETDIPVFGICLGHQ-LLALA 277 (379)
T ss_dssp TCHHHHHHHHHHTTSCCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECchHH-HHHHH
Confidence 357888999999999999999999995 88876
No 149
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=54.72 E-value=19 Score=31.91 Aligned_cols=87 Identities=17% Similarity=0.223 Sum_probs=48.6
Q ss_pred CCeEEEEeCCCcch-hHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 160 SPQILVPIANGSEE-MEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 160 ~~~v~ill~~g~~~-~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
++|++|++-|..-. ..+..+.+.|++.++++.+...+...... .+ ..+.....+|.|++.||.+.
T Consensus 29 ~~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~~~~~~-----~~-----~~~~~~~~~d~vvv~GGDGT---- 94 (332)
T 2bon_A 29 FPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAA-----RY-----VEEARKFGVATVIAGGGDGT---- 94 (332)
T ss_dssp -CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHHH-----HH-----HHHHHHHTCSEEEEEESHHH----
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecCcchHH-----HH-----HHHHHhcCCCEEEEEccchH----
Confidence 57899988773321 23446778889999988776544210100 00 11111245899999999653
Q ss_pred hcCHHHHHHHHHHH----hcCCcEEEEcchh
Q 019238 239 AKSKKLVNMLKKQK----ESNRPYGAICASP 265 (344)
Q Consensus 239 ~~~~~l~~~l~~~~----~~~k~I~aic~G~ 265 (344)
+.+.++... ....+++.+=.|+
T Consensus 95 -----l~~v~~~l~~~~~~~~~plgiiP~Gt 120 (332)
T 2bon_A 95 -----INEVSTALIQCEGDDIPALGILPLGT 120 (332)
T ss_dssp -----HHHHHHHHHHCCSSCCCEEEEEECSS
T ss_pred -----HHHHHHHHhhcccCCCCeEEEecCcC
Confidence 233444444 4556777664443
No 150
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=54.56 E-value=28 Score=30.40 Aligned_cols=87 Identities=16% Similarity=0.164 Sum_probs=48.1
Q ss_pred CCCeEEEEeCCCc--c--hhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccc
Q 019238 159 NSPQILVPIANGS--E--EMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG 234 (344)
Q Consensus 159 ~~~~v~ill~~g~--~--~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~ 234 (344)
+++|+.+++-|.. . ..-+..+...|+..++++++...+..... ..+ ..+.. ..+|.|++.||.+.
T Consensus 7 ~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a-----~~~-----~~~~~-~~~d~vv~~GGDGT 75 (304)
T 3s40_A 7 KFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDA-----TKY-----CQEFA-SKVDLIIVFGGDGT 75 (304)
T ss_dssp SCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHH-----HHH-----HHHHT-TTCSEEEEEECHHH
T ss_pred CCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchH-----HHH-----HHHhh-cCCCEEEEEccchH
Confidence 4689999988832 1 22344677889999988877654431010 000 11111 36788888888543
Q ss_pred hHhhhcCHHHHHHHHHHHh--cCCcEEEEcchh
Q 019238 235 AQAFAKSKKLVNMLKKQKE--SNRPYGAICASP 265 (344)
Q Consensus 235 ~~~l~~~~~l~~~l~~~~~--~~k~I~aic~G~ 265 (344)
. .+.++.... ...+++-+=.|+
T Consensus 76 l---------~~v~~~l~~~~~~~~l~iiP~Gt 99 (304)
T 3s40_A 76 V---------FECTNGLAPLEIRPTLAIIPGGT 99 (304)
T ss_dssp H---------HHHHHHHTTCSSCCEEEEEECSS
T ss_pred H---------HHHHHHHhhCCCCCcEEEecCCc
Confidence 2 223333333 455666665554
No 151
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=53.16 E-value=15 Score=36.03 Aligned_cols=29 Identities=17% Similarity=0.377 Sum_probs=24.7
Q ss_pred HHHHHHHHHhhCCCEEEEEchhHHHHHHHc
Q 019238 62 VLESIVKKQASDGRLYAAICVFLAVALGSW 91 (344)
Q Consensus 62 ~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (344)
.+.++|++..+.++++.+||-|-- +|+.+
T Consensus 509 ~~~~lI~~a~~~~iPiLGIClG~Q-lLa~a 537 (645)
T 3r75_A 509 RLYAWLRHLIDEGKPFMAVCLSHQ-ILNAI 537 (645)
T ss_dssp HHHHHHHHHHHHTCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECHHHH-HHHHH
Confidence 457788888889999999999995 88865
No 152
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=52.90 E-value=26 Score=30.17 Aligned_cols=87 Identities=20% Similarity=0.136 Sum_probs=52.4
Q ss_pred CCeEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 160 SPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 160 ~~~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+++|++++.+ .|...-+..+.+.+++.|+++.+...... +-. ....++......+|.||+.+...
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~--------~~~~i~~l~~~~vdgiIi~~~~~--- 69 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN-EET--------QMSQIENMINRGVDVLVIIPYNG--- 69 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTC-HHH--------HHHHHHHHHHTTCSEEEEECSST---
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCC-HHH--------HHHHHHHHHHcCCCEEEEeCCCh---
Confidence 4689999875 45555566788888899999988766442 100 00112233335689988876421
Q ss_pred hhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 237 AFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
..+.+.+++..+.+.|+..+..
T Consensus 70 -----~~~~~~~~~~~~~~iPvV~~~~ 91 (313)
T 3m9w_A 70 -----QVLSNVVKEAKQEGIKVLAYDR 91 (313)
T ss_dssp -----TSCHHHHHHHHTTTCEEEEESS
T ss_pred -----hhhHHHHHHHHHCCCeEEEECC
Confidence 1123355666667778777764
No 153
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=52.89 E-value=37 Score=26.58 Aligned_cols=93 Identities=15% Similarity=0.121 Sum_probs=58.5
Q ss_pred CCCeEEEEeCCCcch---hHHHHHHHHHHhcCC---eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCc
Q 019238 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL 232 (344)
Q Consensus 159 ~~~~v~ill~~g~~~---~e~~~~~~~l~~~~~---~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~ 232 (344)
...||+|+...-... .-+....+.|.+.|. +++++.+.|- .-+.+... .+.. ..+||+++..|-.
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGa------fEiP~aa~-~la~--~~~yDavIaLG~V 81 (154)
T 1rvv_A 11 TGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGA------FEIPFAAK-KMAE--TKKYDAIITLGTV 81 (154)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSG------GGHHHHHH-HHHH--TSCCSEEEEEEEE
T ss_pred CCCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHH-HHHh--cCCCCEEEEeeee
Confidence 357899999874444 556788899999984 4677777652 11122222 1222 2679999887631
Q ss_pred ----cchHhhhcCHHHHHHHHHHHhcCCcEEE
Q 019238 233 ----GGAQAFAKSKKLVNMLKKQKESNRPYGA 260 (344)
Q Consensus 233 ----~~~~~l~~~~~l~~~l~~~~~~~k~I~a 260 (344)
.....+-.+.....+.+-..+.++||+.
T Consensus 82 IrG~T~Hfd~V~~~vs~Gl~~v~l~~~vPV~~ 113 (154)
T 1rvv_A 82 IRGATTHYDYVCNEAAKGIAQAANTTGVPVIF 113 (154)
T ss_dssp ECCSSSHHHHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred ecCCchHHHHHHHHHHHHHHHHHhhhCCCEEE
Confidence 2233445566666777777788998764
No 154
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=52.74 E-value=35 Score=26.90 Aligned_cols=91 Identities=10% Similarity=0.061 Sum_probs=57.2
Q ss_pred CCCeEEEEeCCCcch---hHHHHHHHHHHhcCC-eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCc--
Q 019238 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA-NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL-- 232 (344)
Q Consensus 159 ~~~~v~ill~~g~~~---~e~~~~~~~l~~~~~-~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~-- 232 (344)
.+.||+|+...-... .-+....+.|.+.|. +++++.+.|- .-+.+.... +. ..||+++..|-.
T Consensus 16 ~~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGa------fEiP~aak~-la----~~yDavIaLG~VIr 84 (160)
T 2c92_A 16 SGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGA------IEIPVVAQE-LA----RNHDAVVALGVVIR 84 (160)
T ss_dssp TTCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSG------GGHHHHHHH-HH----TSCSEEEEEEEEEC
T ss_pred CCCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcH------HHHHHHHHH-HH----hcCCEEEEEeeeec
Confidence 457899999875444 556788899999987 6666666552 111111111 11 259999887632
Q ss_pred --cchHhhhcCHHHHHHHHHHHhcCCcEEE
Q 019238 233 --GGAQAFAKSKKLVNMLKKQKESNRPYGA 260 (344)
Q Consensus 233 --~~~~~l~~~~~l~~~l~~~~~~~k~I~a 260 (344)
.....+-.+.....+.+-..+.++||+.
T Consensus 85 G~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~ 114 (160)
T 2c92_A 85 GQTPHFDYVCDAVTQGLTRVSLDSSTPIAN 114 (160)
T ss_dssp CSSTHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 2233444566666777777788998764
No 155
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=52.38 E-value=23 Score=31.48 Aligned_cols=38 Identities=11% Similarity=-0.089 Sum_probs=25.7
Q ss_pred CCeEEEEeCCCcc---h-hHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 160 SPQILVPIANGSE---E-MEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 160 ~~~v~ill~~g~~---~-~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
++|++|++-|..- . ..+..+.+.|+..|+++.+...+.
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~ 65 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK 65 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC
Confidence 4679988877442 2 234567888999998887765443
No 156
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=52.15 E-value=67 Score=27.25 Aligned_cols=70 Identities=11% Similarity=0.131 Sum_probs=44.6
Q ss_pred HHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcE
Q 019238 179 IIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPY 258 (344)
Q Consensus 179 ~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I 258 (344)
+.+.|+..++++++.+.+.- ...++.....+||+||.-|-.. ... -++...+-|+++.++|+-+
T Consensus 37 i~~~L~~~gf~V~~~t~dd~-------------~~~~~~~~L~~~DvvV~~~~~~-~~~--l~~~~~~al~~~V~~GgG~ 100 (252)
T 1t0b_A 37 IASYLAEAGFDAATAVLDEP-------------EHGLTDEVLDRCDVLVWWGHIA-HDE--VKDEVVERVHRRVLEGMGL 100 (252)
T ss_dssp HHHHHHHTTCEEEEEESSSG-------------GGGCCHHHHHTCSEEEEECSSC-GGG--SCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhhCCcEEEEEeccCc-------------cccCCHhHHhcCCEEEEecCCC-CCc--CCHHHHHHHHHHHHcCCCE
Confidence 47888889999988764321 0012211226899999854211 112 3566677788888889998
Q ss_pred EEEcch
Q 019238 259 GAICAS 264 (344)
Q Consensus 259 ~aic~G 264 (344)
+++-+|
T Consensus 101 vgiH~a 106 (252)
T 1t0b_A 101 IVLHSG 106 (252)
T ss_dssp EEEGGG
T ss_pred EEEccc
Confidence 888766
No 157
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=51.95 E-value=23 Score=30.03 Aligned_cols=89 Identities=17% Similarity=0.063 Sum_probs=50.9
Q ss_pred CCCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccc
Q 019238 158 DNSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG 234 (344)
Q Consensus 158 ~~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~ 234 (344)
.++++|++++.+- |...-+.++.+.+.+.|+++.++..... .-. ....++......+|.||+.+...
T Consensus 6 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~--------~~~~~~~l~~~~vdgiI~~~~~~- 75 (293)
T 3l6u_A 6 PKRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNS-RIS--------EREQILEFVHLKVDAIFITTLDD- 75 (293)
T ss_dssp ---CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSC-HHH--------HHHHHHHHHHTTCSEEEEECSCT-
T ss_pred CCCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCC-HHH--------HHHHHHHHHHcCCCEEEEecCCh-
Confidence 3568999999763 3333345666778888999987765542 100 00122233335789999966421
Q ss_pred hHhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 235 AQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 235 ~~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
....+.+++..+.+.++..+..
T Consensus 76 -------~~~~~~~~~~~~~~iPvV~~~~ 97 (293)
T 3l6u_A 76 -------VYIGSAIEEAKKAGIPVFAIDR 97 (293)
T ss_dssp -------TTTHHHHHHHHHTTCCEEEESS
T ss_pred -------HHHHHHHHHHHHcCCCEEEecC
Confidence 1123455666667888887764
No 158
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=51.88 E-value=5.3 Score=38.58 Aligned_cols=29 Identities=24% Similarity=0.177 Sum_probs=25.6
Q ss_pred HHHHHHHHHhhCCCEEEEEchhHHHHHHHc
Q 019238 62 VLESIVKKQASDGRLYAAICVFLAVALGSW 91 (344)
Q Consensus 62 ~~~~~l~~~~~~g~~i~aiC~g~~~~La~a 91 (344)
.+.++|+++.++++|+.+||.|.. +|+.+
T Consensus 67 ~~~~~i~~~~~~g~PiLGIC~G~Q-lL~~a 95 (555)
T 1jvn_A 67 GFEKPIREYIESGKPIMGIXVGLQ-ALFAG 95 (555)
T ss_dssp TCHHHHHHHHHTTCCEEEEEHHHH-TTEEE
T ss_pred cHHHHHHHHHHcCCcEEEEchhhh-hhhhh
Confidence 457899999999999999999995 99986
No 159
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=51.65 E-value=27 Score=27.52 Aligned_cols=93 Identities=16% Similarity=0.084 Sum_probs=57.4
Q ss_pred CCCeEEEEeCCCcch---hHHHHHHHHHHhcCC---eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCc
Q 019238 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL 232 (344)
Q Consensus 159 ~~~~v~ill~~g~~~---~e~~~~~~~l~~~~~---~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~ 232 (344)
...||+|+...-... .-+....+.|.+.|. +++++.+.|- .-+.+... .+... .+||+++..|-.
T Consensus 10 ~~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGa------fEiP~aa~-~la~~--~~yDavIaLG~V 80 (157)
T 2obx_A 10 ETVRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGA------YEIPLHAR-TLAET--GRYGAVLGTAFV 80 (157)
T ss_dssp CCEEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSG------GGHHHHHH-HHHHH--TCCSEEEEEEEC
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHH-HHHhc--CCCCEEEEeecc
Confidence 457899999874444 556678888988874 4677776652 11222222 12222 679999988732
Q ss_pred ----cchHhhhcCHHHHHHHHHHHhcCCcEEE
Q 019238 233 ----GGAQAFAKSKKLVNMLKKQKESNRPYGA 260 (344)
Q Consensus 233 ----~~~~~l~~~~~l~~~l~~~~~~~k~I~a 260 (344)
.....+-.+.....+.+-..+.++||+.
T Consensus 81 IrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~ 112 (157)
T 2obx_A 81 VNGGIYRHEFVASAVIDGMMNVQLSTGVPVLS 112 (157)
T ss_dssp CCCSSBCCHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 1223344455566677777788898763
No 160
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=50.85 E-value=29 Score=30.01 Aligned_cols=89 Identities=13% Similarity=0.050 Sum_probs=54.5
Q ss_pred CCCeEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccch
Q 019238 159 NSPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (344)
Q Consensus 159 ~~~~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~ 235 (344)
.+++|++++.+ .|...-+..+.+.+++.|+++.+...... +-. ....++......+|+||+.+...
T Consensus 2 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~--------~~~~i~~~~~~~vdgiIi~~~~~-- 70 (330)
T 3uug_A 2 DKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDD-IPN--------QLSQIENMVTKGVKVLVIASIDG-- 70 (330)
T ss_dssp CCCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHH--------HHHHHHHHHHHTCSEEEECCSSG--
T ss_pred CCcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCC-HHH--------HHHHHHHHHHcCCCEEEEEcCCc--
Confidence 35789999876 34444555677888888999988775442 100 00122332235689999976421
Q ss_pred HhhhcCHHHHHHHHHHHhcCCcEEEEcch
Q 019238 236 QAFAKSKKLVNMLKKQKESNRPYGAICAS 264 (344)
Q Consensus 236 ~~l~~~~~l~~~l~~~~~~~k~I~aic~G 264 (344)
....+.+++..+.+.++..+...
T Consensus 71 ------~~~~~~~~~~~~~giPvV~~~~~ 93 (330)
T 3uug_A 71 ------TTLSDVLKQAGEQGIKVIAYDRL 93 (330)
T ss_dssp ------GGGHHHHHHHHHTTCEEEEESSC
T ss_pred ------hhHHHHHHHHHHCCCCEEEECCC
Confidence 12234556667778888887653
No 161
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=49.96 E-value=73 Score=23.33 Aligned_cols=68 Identities=18% Similarity=0.182 Sum_probs=41.0
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhcCHH--HHHHHHHHHh-
Q 019238 177 VIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKK--LVNMLKKQKE- 253 (344)
Q Consensus 177 ~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~--l~~~l~~~~~- 253 (344)
-.+.+.+...|++++++....- ..++. .++|.|++...... . ...+. +..|+++...
T Consensus 18 ~~i~~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~d~vi~g~p~y~-~--~~~~~~~~~~fl~~l~~~ 77 (137)
T 2fz5_A 18 NEIEAAVKAAGADVESVRFEDT---------------NVDDV--ASKDVILLGCPAMG-S--EELEDSVVEPFFTDLAPK 77 (137)
T ss_dssp HHHHHHHHHTTCCEEEEETTSC---------------CHHHH--HTCSEEEEECCCBT-T--TBCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHhCCCeEEEEEcccC---------------CHHHH--hcCCEEEEEccccC-C--CCCCHHHHHHHHHHhhhh
Confidence 3455667777888887765431 12334 57899999654211 1 12334 6777776533
Q ss_pred -cCCcEEEEcch
Q 019238 254 -SNRPYGAICAS 264 (344)
Q Consensus 254 -~~k~I~aic~G 264 (344)
++|+++.+++.
T Consensus 78 l~~k~~~~~~t~ 89 (137)
T 2fz5_A 78 LKGKKVGLFGSY 89 (137)
T ss_dssp CSSCEEEEEEEE
T ss_pred cCCCEEEEEEec
Confidence 68888877754
No 162
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=49.91 E-value=30 Score=29.43 Aligned_cols=75 Identities=17% Similarity=0.213 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhh------cC----HHH
Q 019238 175 EAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA------KS----KKL 244 (344)
Q Consensus 175 e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~------~~----~~l 244 (344)
+...+.+.|+..++++++..... ... -.|+ ..+.. .+||+||+.+... ..+. .+ +..
T Consensus 41 ~~~~l~~aL~~~~~~v~~~~~~~--~~~------~fp~-~~~~L--~~yDvIIl~~~~~--~~l~~~~~~~~~~~~~~~~ 107 (256)
T 2gk3_A 41 GATWLLECLRKGGVDIDYMPAHT--VQI------AFPE-SIDEL--NRYDVIVISDIGS--NTFLLQNETFYQLKIKPNA 107 (256)
T ss_dssp SCHHHHHHHHHTTCEEEEECHHH--HHH------CCCC-SHHHH--HTCSEEEEESCCH--HHHHSCHHHHTTCCCCCCH
T ss_pred cHHHHHHHHHhcCceEEEEeccc--chh------hCCc-ChhHH--hcCCEEEEeCCch--hhcccccccccccccChHH
Confidence 45567888888899998875431 000 0011 13344 6899999987422 2221 12 556
Q ss_pred HHHHHHHHhcCCcEEEEc
Q 019238 245 VNMLKKQKESNRPYGAIC 262 (344)
Q Consensus 245 ~~~l~~~~~~~k~I~aic 262 (344)
++.|+++.++|.-+..+.
T Consensus 108 ~~~l~~~V~~GGgll~ig 125 (256)
T 2gk3_A 108 LESIKEYVKNGGGLLMIG 125 (256)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHhCCEEEEEC
Confidence 788888888888888885
No 163
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=49.75 E-value=23 Score=31.99 Aligned_cols=91 Identities=11% Similarity=-0.003 Sum_probs=52.2
Q ss_pred CCCeEEEEeCCCc--chhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 159 NSPQILVPIANGS--EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 159 ~~~~v~ill~~g~--~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+.+|+.|+-+... ...=.-.+.+.+...|++++++....- . ......++ .++|.|++...... .
T Consensus 255 ~~~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~~~~~~-~----------~~~~~~~l--~~~d~iiigsP~y~-~ 320 (404)
T 2ohh_A 255 VDERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHED-D----------RSEIVKDI--LESGAIALGAPTIY-D 320 (404)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEEETTTS-C----------HHHHHHHH--HTCSEEEEECCEET-T
T ss_pred CCCcEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HHCCEEEEECcccc-c
Confidence 4578887776643 333333456667777888888776542 1 11112344 67899999754211 1
Q ss_pred hhhcCHHHHHHHHHHH---h---cCCcEEEEcchh
Q 019238 237 AFAKSKKLVNMLKKQK---E---SNRPYGAICASP 265 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~---~---~~k~I~aic~G~ 265 (344)
.-.+.+.+|+.+.. . ++|+++.+|++.
T Consensus 321 --~~~~~~k~~ld~l~~~~~~~l~~k~~~~~~~~g 353 (404)
T 2ohh_A 321 --EPYPSVGDLLMYLRGLKFNRTLTRKALVFGSMG 353 (404)
T ss_dssp --EECTHHHHHHHHHHHHCGGGTCCEEEEEEEEES
T ss_pred --cchHHHHHHHHHhhhccccccCCCEEEEEEecC
Confidence 12334555554433 3 788988888764
No 164
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=48.96 E-value=32 Score=27.05 Aligned_cols=92 Identities=15% Similarity=0.118 Sum_probs=56.9
Q ss_pred CCCeEEEEeCCCcch---hHHHHHHHHHHhcCC--eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCc-
Q 019238 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA--NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL- 232 (344)
Q Consensus 159 ~~~~v~ill~~g~~~---~e~~~~~~~l~~~~~--~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~- 232 (344)
...||+|+...-..+ .-+....+.|.+.|. +++++.+.|- .-+.+... .+.. ..+||+++..|-.
T Consensus 12 ~~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGa------fEiP~aa~-~la~--~~~yDavIaLG~VI 82 (156)
T 1c2y_A 12 QSFRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGA------YELGVTAQ-ALGK--SGKYHAIVCLGAVV 82 (156)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSH------HHHHHHHH-HHHH--TTCCSEEEEEEECC
T ss_pred CCCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcH------HHHHHHHH-HHHh--cCCCCEEEEecccc
Confidence 357899999874433 556788899999985 5666666552 11112222 1222 2679999988732
Q ss_pred ---cchHhhhcCHHHHHHHHHHHhcCCcEE
Q 019238 233 ---GGAQAFAKSKKLVNMLKKQKESNRPYG 259 (344)
Q Consensus 233 ---~~~~~l~~~~~l~~~l~~~~~~~k~I~ 259 (344)
.....+-.+.....+.+-..+.++||+
T Consensus 83 rG~T~Hfd~Va~~v~~gl~~v~L~~~vPV~ 112 (156)
T 1c2y_A 83 KGDTSHYDAVVNSASSGVLSAGLNSGVPCV 112 (156)
T ss_dssp CCSSTHHHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhcCCCEE
Confidence 223344455566667777778888876
No 165
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=48.96 E-value=36 Score=29.25 Aligned_cols=36 Identities=14% Similarity=0.317 Sum_probs=22.1
Q ss_pred CCccEEEEcCCccchHhhhcCHHHHHHHHHHHhc--CCcEEEEcchh
Q 019238 221 LSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKES--NRPYGAICASP 265 (344)
Q Consensus 221 ~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~--~k~I~aic~G~ 265 (344)
.++|++++.||.+. ++.-.+.+... +.||.+|-.|.
T Consensus 34 ~~~D~vv~lGGDGT---------~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 34 VEPEIVISIGGDGT---------FLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SSCSEEEEEESHHH---------HHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCCEEEEEcCcHH---------HHHHHHHHhhcCCCCCEEEEeCCC
Confidence 45788888888542 33344444443 67777776654
No 166
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=48.94 E-value=29 Score=29.32 Aligned_cols=88 Identities=13% Similarity=0.041 Sum_probs=50.3
Q ss_pred CCCeEEEEeCCCc---chhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccch
Q 019238 159 NSPQILVPIANGS---EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (344)
Q Consensus 159 ~~~~v~ill~~g~---~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~ 235 (344)
++++|++++.+-. ...-+..+.+.+++.|+++.+...... +-. ....++......+|.||+.+...
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~--------~~~~~~~l~~~~vdgiIi~~~~~-- 72 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRN-DQT--------QVSQIQTLIAQKPDAIIEQLGNL-- 72 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHH--------HHHHHHHHHHHCCSEEEEESSCH--
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCC-HHH--------HHHHHHHHHHcCCCEEEEeCCCh--
Confidence 4689999988632 222345677778888999988765442 100 00112222234678888765421
Q ss_pred HhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 236 QAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 236 ~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
....+.+++..+.+.++..+..
T Consensus 73 ------~~~~~~~~~~~~~~iPvV~~~~ 94 (291)
T 3l49_A 73 ------DVLNPWLQKINDAGIPLFTVDT 94 (291)
T ss_dssp ------HHHHHHHHHHHHTTCCEEEESC
T ss_pred ------hhhHHHHHHHHHCCCcEEEecC
Confidence 1223345556666777777654
No 167
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=48.62 E-value=13 Score=32.26 Aligned_cols=30 Identities=3% Similarity=-0.096 Sum_probs=25.3
Q ss_pred ChHHHHHHHHHhhCCCEEEEEchhHHHHHHH
Q 019238 60 SEVLESIVKKQASDGRLYAAICVFLAVALGS 90 (344)
Q Consensus 60 ~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~ 90 (344)
.+....+++++.++++|+.+||-|-. +|+.
T Consensus 82 ~~~~~~~i~~~~~~~~PilGIC~G~Q-ll~~ 111 (273)
T 2w7t_A 82 VDGKCAAAQVARMNNIPYFGVXLGMQ-VAVI 111 (273)
T ss_dssp HHHHHHHHHHHHHHTCCEEEETHHHH-HHHH
T ss_pred chhHHHHHHHHHHCCCcEEEECcCHH-HHHH
Confidence 34677899998889999999999995 8874
No 168
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=48.35 E-value=18 Score=31.41 Aligned_cols=91 Identities=15% Similarity=0.057 Sum_probs=50.2
Q ss_pred CCeEEEEeCCCcc--hhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 160 SPQILVPIANGSE--EMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 160 ~~~v~ill~~g~~--~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
++||+|+.-++-. ...+..+.+.|++.|+++.+...... .. ...+.... ..+.. ..++|+|++.||.+.
T Consensus 5 mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~-~~-~~~~~~~~---~~~~~-~~~~D~vi~~GGDGT--- 75 (292)
T 2an1_A 5 FKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAH-EL-QLKNVPTG---TLAEI-GQQADLAVVVGGDGN--- 75 (292)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHH-HT-TCSSCCEE---CHHHH-HHHCSEEEECSCHHH---
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh-hc-cccccccc---chhhc-ccCCCEEEEEcCcHH---
Confidence 5789988876531 22355677888999998765432210 00 00011100 11111 246899999999543
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcchh
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICASP 265 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G~ 265 (344)
+++-++.+...+.++.+|-.|.
T Consensus 76 ------~l~a~~~~~~~~~P~lGI~~Gt 97 (292)
T 2an1_A 76 ------MLGAARTLARYDINVIGINRGN 97 (292)
T ss_dssp ------HHHHHHHHTTSSCEEEEBCSSS
T ss_pred ------HHHHHHHhhcCCCCEEEEECCC
Confidence 4455566666678888887665
No 169
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=48.21 E-value=30 Score=29.30 Aligned_cols=87 Identities=11% Similarity=0.052 Sum_probs=47.2
Q ss_pred CCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 160 SPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 160 ~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+++|++++.+- |...-+.++.+.+.+.|+++.+...... +-. ....++......+|.||+.+... .
T Consensus 2 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~-~~~--------~~~~~~~l~~~~vdgiI~~~~~~--~ 70 (290)
T 2fn9_A 2 KGKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQND-TAK--------ESAHFDAIIAAGYDAIIFNPTDA--D 70 (290)
T ss_dssp -CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTC-HHH--------HHHHHHHHHHTTCSEEEECCSCT--T
T ss_pred ceEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCCCCC-HHH--------HHHHHHHHHHcCCCEEEEecCCh--H
Confidence 47899998752 3333345666777888999877655432 100 00112232235789999976421 1
Q ss_pred hhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 237 AFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
...+.+++..+.+.++..+..
T Consensus 71 ------~~~~~~~~~~~~~iPvV~~~~ 91 (290)
T 2fn9_A 71 ------GSIANVKRAKEAGIPVFCVDR 91 (290)
T ss_dssp ------TTHHHHHHHHHTTCCEEEESS
T ss_pred ------HHHHHHHHHHHCCCeEEEEec
Confidence 112234444456777776654
No 170
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=48.12 E-value=7.6 Score=31.58 Aligned_cols=100 Identities=12% Similarity=0.030 Sum_probs=51.8
Q ss_pred CCeEEEEeCC----CcchhHHHHHHHH-HHhcCCeEEEEEeCCCceeeeccceeeeec---cccccccCCCccEEEEcCC
Q 019238 160 SPQILVPIAN----GSEEMEAVIIIDI-LRRAKANVVVASVADKLEILASCQVKLVAD---MLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 160 ~~~v~ill~~----g~~~~e~~~~~~~-l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~---~~~~~~~~~~~D~liipGG 231 (344)
||||.++... |....=+-.+.+. +...|.+++++....- ++....+-...++ .-.+.+ .++|+|++..-
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~~~-~~~~~~~~~~~~~~~~~~~~~i--~~aD~ii~~sP 78 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHVIDL-DPKALLRGDLSNAKLKEAVDAT--CNADGLIVATP 78 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEGGGS-CHHHHHHTCTTSHHHHHHHHHH--HHCSEEEEEEE
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEcccc-CchhhcccccCcHHHHHHHHHH--HHCCEEEEEeC
Confidence 4688877765 3333333345566 7777888888876542 2210000000011 011223 56899998542
Q ss_pred ccchHhhhcCHHHHHHHHHH---HhcCCcEEEEcchh
Q 019238 232 LGGAQAFAKSKKLVNMLKKQ---KESNRPYGAICASP 265 (344)
Q Consensus 232 ~~~~~~l~~~~~l~~~l~~~---~~~~k~I~aic~G~ 265 (344)
.. ...-.+.+..||.+. .-++|+++.+++|.
T Consensus 79 ~y---~~~~p~~lK~~ld~l~~~~~~gK~~~~~~tgg 112 (197)
T 2vzf_A 79 IY---KASYTGLLKAFLDILPQFALAGKAALPLATGG 112 (197)
T ss_dssp CB---TTBCCHHHHHHHTTSCTTTTTTCEEEEEEEES
T ss_pred cc---CCCCCHHHHHHHHhccccccCCCEEEEEEECC
Confidence 11 111244455555543 24588888888764
No 171
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=47.96 E-value=55 Score=25.74 Aligned_cols=92 Identities=14% Similarity=0.111 Sum_probs=57.5
Q ss_pred CCCeEEEEeCCCcch---hHHHHHHHHHHh-cCC---eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC
Q 019238 159 NSPQILVPIANGSEE---MEAVIIIDILRR-AKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 159 ~~~~v~ill~~g~~~---~e~~~~~~~l~~-~~~---~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG 231 (344)
...||+|+...-..+ .-+....+.|.+ .|. +++++.+.|- .-+.+... .+... .+||+++..|-
T Consensus 16 ~~~riaIV~arfn~~I~~~Ll~ga~~~l~~~~Gv~~~~i~v~~VPGa------fEiP~aa~-~la~~--~~yDavIaLG~ 86 (159)
T 1kz1_A 16 PELRILIVHARGNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGS------WELPQGIR-ASIAR--NTYDAVIGIGV 86 (159)
T ss_dssp TTCCEEEEECCTTHHHHHHHHHHHHHHHHHHHCCCGGGEEEEECSSG------GGHHHHHH-HHHHH--SCCSEEEEEEE
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHH-HHHhc--CCCCEEEEecc
Confidence 357899999874443 556788899999 784 4777777662 11122222 12222 57999988763
Q ss_pred c----cchHhhhcCHHHHHHHHHHHhcCCcEE
Q 019238 232 L----GGAQAFAKSKKLVNMLKKQKESNRPYG 259 (344)
Q Consensus 232 ~----~~~~~l~~~~~l~~~l~~~~~~~k~I~ 259 (344)
. .....+-.+.....+.+-..+.++||+
T Consensus 87 VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~ 118 (159)
T 1kz1_A 87 LIKGSTMHFEYISEAVVHGLMRVGLDSGVPVI 118 (159)
T ss_dssp EECCSSSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred cccCCchHHHHHHHHHHHHHHHHHhhcCCCEE
Confidence 1 223344455666667777778888876
No 172
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=47.22 E-value=30 Score=29.54 Aligned_cols=89 Identities=10% Similarity=-0.013 Sum_probs=50.2
Q ss_pred CCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccch
Q 019238 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (344)
Q Consensus 159 ~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~ 235 (344)
+.++|++++.+. |...-+.++.+.+++.|+++.++..... .... ....++......+|.||+.+...
T Consensus 3 ~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~~-------~~~~i~~l~~~~vdgiIi~~~~~-- 72 (305)
T 3g1w_A 3 LNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQY-DIQE-------QITVLEQAIAKNPAGIAISAIDP-- 72 (305)
T ss_dssp --CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSS-CHHH-------HHHHHHHHHHHCCSEEEECCSST--
T ss_pred CCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcC-CHHH-------HHHHHHHHHHhCCCEEEEcCCCH--
Confidence 468999998763 3444445667778888999987543322 1000 00122222235689999876421
Q ss_pred HhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 236 QAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 236 ~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
....+.+++..+.+.++..+..
T Consensus 73 ------~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 73 ------VELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp ------TTTHHHHHHHHHTTCCEEEESS
T ss_pred ------HHHHHHHHHHHHCCCcEEEECC
Confidence 1123345666667888887764
No 173
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=46.93 E-value=62 Score=23.97 Aligned_cols=78 Identities=18% Similarity=0.189 Sum_probs=45.5
Q ss_pred CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhcCHHHHHHHH
Q 019238 170 GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLK 249 (344)
Q Consensus 170 g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~ 249 (344)
|....=.-.+.+.+...|++++++....- ...+. .+||.|++...... .....+..+.+|++
T Consensus 10 GnT~~iA~~ia~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~d~iiig~pty~-~g~~p~~~~~~fl~ 71 (138)
T 5nul_A 10 GNTEKMAELIAKGIIESGKDVNTINVSDV---------------NIDEL--LNEDILILGCSAMT-DEVLEESEFEPFIE 71 (138)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCEEEEGGGC---------------CHHHH--TTCSEEEEEECCBT-TTBCCTTTHHHHHH
T ss_pred chHHHHHHHHHHHHHHCCCeEEEEEhhhC---------------CHHHH--hhCCEEEEEcCccC-CCCCChHHHHHHHH
Confidence 33333334566777888888877766541 12344 67899888654211 11111114667777
Q ss_pred HHH--hcCCcEEEEcchh
Q 019238 250 KQK--ESNRPYGAICASP 265 (344)
Q Consensus 250 ~~~--~~~k~I~aic~G~ 265 (344)
+.. -++|+++.++++.
T Consensus 72 ~l~~~l~~k~~~~f~t~g 89 (138)
T 5nul_A 72 EISTKISGKKVALFGSYG 89 (138)
T ss_dssp HHGGGCTTCEEEEEEEES
T ss_pred HHHhhcCCCEEEEEEecC
Confidence 665 3788888888764
No 174
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=46.79 E-value=22 Score=30.52 Aligned_cols=39 Identities=5% Similarity=-0.178 Sum_probs=25.3
Q ss_pred CCCCeEEEEeCCC--------cchhHHHHHHHHHHhcCCeEEEEEeC
Q 019238 158 DNSPQILVPIANG--------SEEMEAVIIIDILRRAKANVVVASVA 196 (344)
Q Consensus 158 ~~~~~v~ill~~g--------~~~~e~~~~~~~l~~~~~~v~~~s~~ 196 (344)
.++++|++++.+. |...=+.++.+.+.+.|+++.+....
T Consensus 20 ~~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 66 (305)
T 3huu_A 20 NKTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTRMTVSE 66 (305)
T ss_dssp -CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEEECCCS
T ss_pred CCCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3568999998771 23333445666777789998775543
No 175
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=46.62 E-value=19 Score=28.20 Aligned_cols=86 Identities=20% Similarity=0.161 Sum_probs=41.8
Q ss_pred CCeEEEEeCCCc--chhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 160 SPQILVPIANGS--EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 160 ~~~v~ill~~g~--~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
+++|.|+-+... ...=.-.+.+.+...|+++++...+.- ...+. .+||.|++.....+...
T Consensus 9 ~~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~---------------~~~~l--~~~d~ii~g~pt~g~G~ 71 (167)
T 1ykg_A 9 MPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDY---------------KFKQI--ASEKLLIVVTSTQGEGE 71 (167)
T ss_dssp ---CEEEEECSSSHHHHHHHHHHHHHHHHTCCCEEEEGGGC---------------CGGGG--GGCSEEEEEEECBGGGB
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEeehhhC---------------CHHHh--ccCCeEEEEEcccCCCc
Confidence 456776665533 332233455666666777666544321 12233 56898888543211112
Q ss_pred hhcCHHHHHHHHHHH------hcCCcEEEEcch
Q 019238 238 FAKSKKLVNMLKKQK------ESNRPYGAICAS 264 (344)
Q Consensus 238 l~~~~~l~~~l~~~~------~~~k~I~aic~G 264 (344)
+ .+.+.+|++... -+++.++.+|.|
T Consensus 72 ~--p~~~~~f~~~l~~~~~~~l~~k~~avfg~G 102 (167)
T 1ykg_A 72 P--PEEAVALHKFLFSKKAPKLENTAFAVFSLG 102 (167)
T ss_dssp C--CGGGHHHHHHHTSTTCCCCTTCEEEEEEEC
T ss_pred C--ChhHHHHHHHHHhccccccCCCEEEEEeec
Confidence 2 223344444432 246777777765
No 176
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=45.99 E-value=43 Score=26.70 Aligned_cols=99 Identities=17% Similarity=0.119 Sum_probs=50.0
Q ss_pred CCeEEEEeCCCcchhH--HHHHHHHHHhcCCeEEEEEeCCCc-eee-eccceeee---eccccccccCCCccEEEEcCCc
Q 019238 160 SPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADKL-EIL-ASCQVKLV---ADMLIDEAAKLSYDLIVLPGGL 232 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e--~~~~~~~l~~~~~~v~~~s~~~~~-~v~-~~~g~~v~---~~~~~~~~~~~~~D~liipGG~ 232 (344)
++||.|+.+. .-..+ +-.+.+.+...|.+++++....-. +.. +..+-... +....+++ .++|.||+..-.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~~~l--~~aD~ii~gsP~ 80 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFDKVKDIPEVTLDDM--RWADGFAIGSPT 80 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCCCSCGGGGTTCCGGGSTTSCBCCHHHH--HHCSEEEEEEEC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhHhCChhhhhccCCCcccccccccHHHH--HhCCEEEEECCc
Confidence 5789888877 32222 223455566678888888765410 000 00010000 00013333 578999885421
Q ss_pred cchHhhhcCHHHHHHHHHHH-------hcCCcEEEEcch
Q 019238 233 GGAQAFAKSKKLVNMLKKQK-------ESNRPYGAICAS 264 (344)
Q Consensus 233 ~~~~~l~~~~~l~~~l~~~~-------~~~k~I~aic~G 264 (344)
....-.+.+..||.+.. -++|+++.++++
T Consensus 81 ---y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~ 116 (199)
T 2zki_A 81 ---RYGNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEA 116 (199)
T ss_dssp ---BTTBCCHHHHHHHHTTHHHHHTTSSTTCEEEEEEEB
T ss_pred ---cccCccHHHHHHHHHhhhcccccccCCCEEEEEEeC
Confidence 11123445666666542 357887777754
No 177
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=45.38 E-value=37 Score=26.74 Aligned_cols=92 Identities=17% Similarity=0.114 Sum_probs=56.9
Q ss_pred CCeEEEEeCCCcch---hHHHHHHHHHHhcCC---eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCc-
Q 019238 160 SPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL- 232 (344)
Q Consensus 160 ~~~v~ill~~g~~~---~e~~~~~~~l~~~~~---~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~- 232 (344)
+.||+|+...-... .-+....+.|.+.|. +++++.+.|- .-+.+... .+.. ..+||+++..|-.
T Consensus 10 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGa------fEiP~aa~-~la~--~~~yDavIaLG~VI 80 (158)
T 1di0_A 10 SFKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGA------YEIPLHAK-TLAR--TGRYAAIVGAAFVI 80 (158)
T ss_dssp CEEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSG------GGHHHHHH-HHHH--TSCCSEEEEEEECC
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHH-HHHh--cCCCCEEEEeeccc
Confidence 47999999875444 556678889998875 4677776652 11122222 1222 2679999988732
Q ss_pred ---cchHhhhcCHHHHHHHHHHHhcCCcEEE
Q 019238 233 ---GGAQAFAKSKKLVNMLKKQKESNRPYGA 260 (344)
Q Consensus 233 ---~~~~~l~~~~~l~~~l~~~~~~~k~I~a 260 (344)
.....+-.+.....+.+-..+.++||+.
T Consensus 81 rG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~ 111 (158)
T 1di0_A 81 DGGIYDHDFVATAVINGMMQVQLETEVPVLS 111 (158)
T ss_dssp CCSSBCCHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred cCCCcHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 1223344455566677777788998763
No 178
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=43.10 E-value=57 Score=25.99 Aligned_cols=86 Identities=21% Similarity=0.151 Sum_probs=48.6
Q ss_pred CCCeEEEEeCC------CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCc
Q 019238 159 NSPQILVPIAN------GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGL 232 (344)
Q Consensus 159 ~~~~v~ill~~------g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~ 232 (344)
+++|++|+..- ...+.....+.+.|+..|+++.....-+..+- .+. ..+.... .++|+||..||.
T Consensus 2 ~~~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~------~I~--~~l~~a~-~~~DlVittGG~ 72 (172)
T 3kbq_A 2 NAKNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLD------EIG--WAFRVAL-EVSDLVVSSGGL 72 (172)
T ss_dssp --CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHH------HHH--HHHHHHH-HHCSEEEEESCC
T ss_pred CCCEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHH------HHH--HHHHHHH-hcCCEEEEcCCC
Confidence 45788888753 24556667788999999988754433221010 000 1122221 358999999996
Q ss_pred cch-Hh-------------hhcCHHHHHHHHHHHh
Q 019238 233 GGA-QA-------------FAKSKKLVNMLKKQKE 253 (344)
Q Consensus 233 ~~~-~~-------------l~~~~~l~~~l~~~~~ 253 (344)
+.. ++ +..++...++|++++.
T Consensus 73 g~~~~D~T~ea~a~~~~~~l~~~~e~~~~i~~~~~ 107 (172)
T 3kbq_A 73 GPTFDDMTVEGFAKCIGQDLRIDEDALAMIKKKYG 107 (172)
T ss_dssp SSSTTCCHHHHHHHHHTCCCEECHHHHHHHHHHHC
T ss_pred cCCcccchHHHHHHHcCCCeeeCHHHHHHHHHHHc
Confidence 421 11 2335667777777765
No 179
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=42.98 E-value=64 Score=28.01 Aligned_cols=40 Identities=5% Similarity=-0.046 Sum_probs=27.7
Q ss_pred CCCCeEEEEeCC-----CcchhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 158 DNSPQILVPIAN-----GSEEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 158 ~~~~~v~ill~~-----g~~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
.++++|++++.+ .|...-+.++.+.+.+.|+++.++....
T Consensus 59 ~~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 103 (338)
T 3dbi_A 59 KSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKH 103 (338)
T ss_dssp -CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 356899999876 2333445567777888899998877544
No 180
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=42.06 E-value=64 Score=26.98 Aligned_cols=86 Identities=15% Similarity=0.025 Sum_probs=48.7
Q ss_pred CCCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccc
Q 019238 158 DNSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG 234 (344)
Q Consensus 158 ~~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~ 234 (344)
.++++|++++.+- |...-+..+.+.+++.|+++.+...... .-. ....++......+|.||+.+...
T Consensus 5 ~~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~-~~~--------~~~~~~~l~~~~vdgiIi~~~~~- 74 (276)
T 3jy6_A 5 QSSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANAD-IER--------EKTLLRAIGSRGFDGLILQSFSN- 74 (276)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTC-HHH--------HHHHHHHHHTTTCSEEEEESSCC-
T ss_pred CCCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC-HHH--------HHHHHHHHHhCCCCEEEEecCCc-
Confidence 3568999998763 3334445667778888999988776542 100 01122233335678877765421
Q ss_pred hHhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 235 AQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 235 ~~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
.+.++...+.+.|+..+..
T Consensus 75 ----------~~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 75 ----------PQTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp ----------HHHHHHHHTTSSCEEEESC
T ss_pred ----------HHHHHHHHHCCCCEEEEec
Confidence 1233444455667666654
No 181
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=41.61 E-value=40 Score=26.80 Aligned_cols=95 Identities=11% Similarity=0.109 Sum_probs=57.4
Q ss_pred CCCeEEEEeCCCcch---hHHHHHHHHHHhcCC---eEEEEEeCCCceeeeccceeeeeccccccc--cCCCccEEEEcC
Q 019238 159 NSPQILVPIANGSEE---MEAVIIIDILRRAKA---NVVVASVADKLEILASCQVKLVADMLIDEA--AKLSYDLIVLPG 230 (344)
Q Consensus 159 ~~~~v~ill~~g~~~---~e~~~~~~~l~~~~~---~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~--~~~~~D~liipG 230 (344)
...||+|+...-... .-+....+.|.+.|. +++++.+.|- .-+.+......... ....||++|..|
T Consensus 15 ~~~ri~IV~arfn~~I~~~Ll~gA~~~L~~~Gv~~~~i~v~~VPGa------fEiP~aak~la~~~~~~~~~yDavIaLG 88 (168)
T 1ejb_A 15 SKIRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGS------YELPWGTKRFVDRQAKLGKPLDVVIPIG 88 (168)
T ss_dssp TTCCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECSSG------GGHHHHHHHHHHHHHHTTCCCSEEEEEE
T ss_pred CCCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcH------HHHHHHHHHHHhhccccCCCcCEEEEec
Confidence 457999999875544 556788899999984 5777777652 11222222112210 125799999877
Q ss_pred Cc----cchHhhhcCHHHHHHHHHHHhcCCcEE
Q 019238 231 GL----GGAQAFAKSKKLVNMLKKQKESNRPYG 259 (344)
Q Consensus 231 G~----~~~~~l~~~~~l~~~l~~~~~~~k~I~ 259 (344)
-. .....+..+.....+.+-..+.++||+
T Consensus 89 ~VIrG~T~Hfd~Va~~vs~Gl~~vsL~~~vPV~ 121 (168)
T 1ejb_A 89 VLIKGSTMHFEYISDSTTHALMNLQEKVDMPVI 121 (168)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHHHHHHHTSCBC
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHhhcCCCEE
Confidence 32 223344455566666776777788754
No 182
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=40.81 E-value=71 Score=26.82 Aligned_cols=90 Identities=10% Similarity=-0.008 Sum_probs=50.7
Q ss_pred CCeEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 160 SPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 160 ~~~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
.++|++++.+ .|...-+..+.+.+.+.|+++.+...... .-. ....++......+|.||+.+....
T Consensus 15 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~~~--------~~~~~~~l~~~~vdgiIi~~~~~~-- 83 (298)
T 3tb6_A 15 NKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNN-PDN--------ERRGLENLLSQHIDGLIVEPTKSA-- 83 (298)
T ss_dssp CCEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTC-HHH--------HHHHHHHHHHTCCSEEEECCSSTT--
T ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC-hHH--------HHHHHHHHHHCCCCEEEEeccccc--
Confidence 3789999876 34444455777788888999988766542 100 011122222356788888664211
Q ss_pred hhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 237 AFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
. .....+.+++..+.+.++..+..
T Consensus 84 ~---~~~~~~~~~~~~~~~iPvV~~~~ 107 (298)
T 3tb6_A 84 L---QTPNIGYYLNLEKNGIPFAMINA 107 (298)
T ss_dssp S---CCTTHHHHHHHHHTTCCEEEESS
T ss_pred c---cCCcHHHHHHHHhcCCCEEEEec
Confidence 0 00112344555556777777664
No 183
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=40.21 E-value=75 Score=27.60 Aligned_cols=39 Identities=18% Similarity=0.083 Sum_probs=27.6
Q ss_pred CCCeEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 159 NSPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 159 ~~~~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
++++|++++.+ .|...-+.++.+.+.+.||++.+.....
T Consensus 61 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 102 (339)
T 3h5o_A 61 KSRTVLVLIPSLANTVFLETLTGIETVLDAAGYQMLIGNSHY 102 (339)
T ss_dssp --CEEEEEESCSTTCTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45789999875 3455555677888888999998776544
No 184
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=39.18 E-value=29 Score=29.04 Aligned_cols=99 Identities=11% Similarity=0.109 Sum_probs=50.4
Q ss_pred CCeEEEEeCC----CcchhHHHHHHHHHHhc-CCeEEEEEeCCCceeeecc---------ceeeee--c---cccccccC
Q 019238 160 SPQILVPIAN----GSEEMEAVIIIDILRRA-KANVVVASVADKLEILASC---------QVKLVA--D---MLIDEAAK 220 (344)
Q Consensus 160 ~~~v~ill~~----g~~~~e~~~~~~~l~~~-~~~v~~~s~~~~~~v~~~~---------g~~v~~--~---~~~~~~~~ 220 (344)
||||+++... |....=+..+.+.+... |.+++++....- ++.... |..... + .-.+.+
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~~~-~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l-- 77 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNS-ELEISNSDSEELFKKGIDRQSNADDGGVIKKEL-- 77 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECTTTC-CCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHH--
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEcccC-CCCCCCchHHhhccCCCCccchHHHHHHHHHHH--
Confidence 3578777754 33333333456667666 899988876542 221110 100000 1 011222
Q ss_pred CCccEEEEcCCccchHhhhcCHHHHHHHHHHH-------hcCCcEEEEcch
Q 019238 221 LSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQK-------ESNRPYGAICAS 264 (344)
Q Consensus 221 ~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~-------~~~k~I~aic~G 264 (344)
.++|+||+..-. ....-...+..||.+.. -.+|+++.++++
T Consensus 78 ~~AD~iI~~sP~---y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~ 125 (242)
T 1sqs_A 78 LESDIIIISSPV---YLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVA 125 (242)
T ss_dssp HHCSEEEEEEEE---CSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEE
T ss_pred HHCCEEEEEccc---cccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeC
Confidence 568999996431 11123445556666542 357777777665
No 185
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=37.80 E-value=60 Score=28.53 Aligned_cols=39 Identities=13% Similarity=0.074 Sum_probs=25.3
Q ss_pred CCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 159 ~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
+++.|++++.+- |...-+..+.+.+.+.||++.+.....
T Consensus 69 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 110 (355)
T 3e3m_A 69 RSGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAY 110 (355)
T ss_dssp --CEEEEEESCSBCHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457899998763 233334466677788899998776543
No 186
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=37.10 E-value=68 Score=26.73 Aligned_cols=86 Identities=9% Similarity=-0.022 Sum_probs=47.1
Q ss_pred CeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 161 PQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 161 ~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
++|++++.+- |...-+..+.+.++..|+++.+...... . .. ....++.......|.+|+.+... .
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~-~-~~-------~~~~i~~l~~~~vdgiIi~~~~~--~- 69 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNN-P-AK-------ELANVQDLTVRGTKILLINPTDS--D- 69 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTC-H-HH-------HHHHHHHHTTTTEEEEEECCSST--T-
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcCcEEEEeCCCCC-H-HH-------HHHHHHHHHHcCCCEEEEeCCCh--H-
Confidence 6788888652 3333344566677788999877654432 1 00 01123333345789999865321 1
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
...+.+++..+.+.|+..+..
T Consensus 70 -----~~~~~~~~~~~~~iPvV~i~~ 90 (271)
T 2dri_A 70 -----AVGNAVKMANQANIPVITLDR 90 (271)
T ss_dssp -----TTHHHHHHHHHTTCCEEEESS
T ss_pred -----HHHHHHHHHHHCCCcEEEecC
Confidence 112234444556778777764
No 187
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=37.03 E-value=60 Score=26.90 Aligned_cols=38 Identities=16% Similarity=0.022 Sum_probs=26.3
Q ss_pred CCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 160 SPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 160 ~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
+++|++++.+- |...-+..+.+.+++.|+++.+.....
T Consensus 2 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 42 (272)
T 3o74_A 2 TRTLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDD 42 (272)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ceEEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 57899998763 333334566677788899998876654
No 188
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=36.78 E-value=89 Score=30.75 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHHhc
Q 019238 175 EAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKES 254 (344)
Q Consensus 175 e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~ 254 (344)
++...+..|...|+.+++++++. +. ..|++||+|.-. .-++.+.+.|+++.++
T Consensus 426 ~~~~~y~aL~~~gi~vD~v~~~~-------------------dL--~~Yklvv~P~~~------~~~~~~~~~L~~yV~~ 478 (675)
T 3tty_A 426 EVHKYYDALYKQNIQTDMISVEE-------------------DL--SKYKVVIAPVMY------MVKPGFAERVERFVAQ 478 (675)
T ss_dssp HHHHHHHHHHTTTCCEEEECTTS-------------------CC--TTCSEEEETTCC------BCCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCceEEEecCcC-------------------Cc--ccCCEEEEeccE------ecCHHHHHHHHHHHhc
Confidence 46778899999999999987752 12 579999999863 1356778888888877
Q ss_pred CCcEE-EEcch
Q 019238 255 NRPYG-AICAS 264 (344)
Q Consensus 255 ~k~I~-aic~G 264 (344)
|..+. +-.+|
T Consensus 479 GG~lv~t~~sG 489 (675)
T 3tty_A 479 GGTFVTTFFSG 489 (675)
T ss_dssp TCEEEEETTCS
T ss_pred CCEEEEEccCC
Confidence 76554 44455
No 189
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=36.49 E-value=1.1e+02 Score=22.56 Aligned_cols=64 Identities=11% Similarity=0.004 Sum_probs=40.8
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcC
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG 230 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipG 230 (344)
++++|+|+=...-...--..+...|.+.||++.-+.++.+ .+ .|....+ ++.++. . .|.++|.-
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~-~i---~G~~~y~--sl~dlp-~-vDlavi~~ 66 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKG-EV---LGKTIIN--ERPVIE-G-VDTVTLYI 66 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCS-EE---TTEECBC--SCCCCT-T-CCEEEECS
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCC-cC---CCeeccC--ChHHCC-C-CCEEEEEe
Confidence 4678888865433333334567778888998888887764 33 4555444 466663 3 88888754
No 190
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=35.63 E-value=48 Score=28.07 Aligned_cols=91 Identities=9% Similarity=-0.066 Sum_probs=50.6
Q ss_pred CCCCeEEEEeCCC----cchhHHHHHHHHHHhc-CCeEEEEEeCCC-ceeeeccceeeeeccccccccCCCccEEEEcCC
Q 019238 158 DNSPQILVPIANG----SEEMEAVIIIDILRRA-KANVVVASVADK-LEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 158 ~~~~~v~ill~~g----~~~~e~~~~~~~l~~~-~~~v~~~s~~~~-~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG 231 (344)
.++++|++++.+. |...-+.++.+.+++. |+.+.+...... .... .-...++......+|.||+.+.
T Consensus 6 ~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~-------~~~~~i~~l~~~~vdgiii~~~ 78 (304)
T 3gbv_A 6 NKKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYN-------SFVATSQAVIEEQPDGVMFAPT 78 (304)
T ss_dssp -CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHH-------HHHHHHHHHHTTCCSEEEECCS
T ss_pred CCcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHH-------HHHHHHHHHHhcCCCEEEECCC
Confidence 3568999998664 3444445666777777 888876543210 0000 0011233333467899999865
Q ss_pred ccchHhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 232 LGGAQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 232 ~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
.. . ...+.+++..+.+.++..+..
T Consensus 79 ~~--~------~~~~~~~~~~~~~iPvV~~~~ 102 (304)
T 3gbv_A 79 VP--Q------YTKGFTDALNELGIPYIYIDS 102 (304)
T ss_dssp SG--G------GTHHHHHHHHHHTCCEEEESS
T ss_pred Ch--H------HHHHHHHHHHHCCCeEEEEeC
Confidence 21 1 122345555566888887764
No 191
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=35.08 E-value=2.2e+02 Score=24.46 Aligned_cols=90 Identities=12% Similarity=0.077 Sum_probs=52.7
Q ss_pred CCeEEEEeCCCcchhHH--HHHHHHHHhcC-CeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 160 SPQILVPIANGSEEMEA--VIIIDILRRAK-ANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~--~~~~~~l~~~~-~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+.||+|+.-....+.+. ..+.+.|++.| +++++...... . ... ..+.+ ...+||+||+--. . .
T Consensus 4 ~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~-~-~d~--------~~f~~-~L~~~D~vV~~~~-~--~ 69 (281)
T 4e5v_A 4 PIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQ-G-KDM--------SGFVL-DFSPYQLVVLDYN-G--D 69 (281)
T ss_dssp CEEEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCT-T-SCC--------TTCCC-CCTTCSEEEECCC-S--S
T ss_pred ceEEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCcc-c-cch--------hHHhh-hhhcCCEEEEeCC-C--C
Confidence 46777775544433333 35667777777 88887654310 0 000 01211 2367999996332 1 1
Q ss_pred hhhcCHHHHHHHHHHHhcCCcEEEEcchh
Q 019238 237 AFAKSKKLVNMLKKQKESNRPYGAICASP 265 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k~I~aic~G~ 265 (344)
. -++...+-|+++.++|+-++++.++.
T Consensus 70 ~--l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 70 S--WPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp C--CCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred c--CCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1 24566777777888899998888763
No 192
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=34.71 E-value=29 Score=26.98 Aligned_cols=42 Identities=7% Similarity=0.042 Sum_probs=23.1
Q ss_pred CCccEEEEcCCccchHhhhcCHHHHHHHH---HHHhcCCcEEEEcch
Q 019238 221 LSYDLIVLPGGLGGAQAFAKSKKLVNMLK---KQKESNRPYGAICAS 264 (344)
Q Consensus 221 ~~~D~liipGG~~~~~~l~~~~~l~~~l~---~~~~~~k~I~aic~G 264 (344)
.+||.|++......... -.+.+.+|+. +..-++|+++.+|+|
T Consensus 45 ~~~d~ii~g~pty~~g~--~p~~~~~f~~~l~~~~l~gk~~~~f~t~ 89 (169)
T 1czn_A 45 NAYDYLIIGCPTWNVGE--LQSDWEGIYDDLDSVNFQGKKVAYFGAG 89 (169)
T ss_dssp GGCSEEEEECCEETTTE--ECHHHHHHGGGGGGSCCTTCEEEEEEEC
T ss_pred hhCCEEEEEecccCCCc--CCHHHHHHHHHhhhhccCCCEEEEEEEC
Confidence 67999999654211111 1223334443 323467888888876
No 193
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=34.71 E-value=57 Score=28.40 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=50.2
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeee------------eccccccccCCCccEEE
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLV------------ADMLIDEAAKLSYDLIV 227 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~------------~~~~~~~~~~~~~D~li 227 (344)
++||+|+ --|..-.- +...|.+.|.++.++..+. .......|+.+. +....+.. .++|+|+
T Consensus 2 ~mkI~Ii-GaGaiG~~---~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~--~~~D~vi 74 (312)
T 3hn2_A 2 SLRIAIV-GAGALGLY---YGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEI--GPMDLVL 74 (312)
T ss_dssp --CEEEE-CCSTTHHH---HHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEETTCCEEESCCCEESCHHHH--CCCSEEE
T ss_pred CCEEEEE-CcCHHHHH---HHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEcCCCeEEEeeceeecCHHHc--CCCCEEE
Confidence 4678766 34444433 3355667788888776543 110001222221 11223333 5789999
Q ss_pred EcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchh
Q 019238 228 LPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASP 265 (344)
Q Consensus 228 ipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~ 265 (344)
+.== .. ..+.+++.|+.....+..|.++++|.
T Consensus 75 lavk---~~---~~~~~l~~l~~~l~~~~~iv~l~nGi 106 (312)
T 3hn2_A 75 VGLK---TF---ANSRYEELIRPLVEEGTQILTLQNGL 106 (312)
T ss_dssp ECCC---GG---GGGGHHHHHGGGCCTTCEEEECCSSS
T ss_pred EecC---CC---CcHHHHHHHHhhcCCCCEEEEecCCC
Confidence 9642 11 23356667776666778888888884
No 194
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=33.92 E-value=35 Score=30.08 Aligned_cols=30 Identities=13% Similarity=0.188 Sum_probs=23.1
Q ss_pred hHHHHHHHHHhhCC--CEEEEEchhHHHHHHHc
Q 019238 61 EVLESIVKKQASDG--RLYAAICVFLAVALGSW 91 (344)
Q Consensus 61 ~~~~~~l~~~~~~g--~~i~aiC~g~~~~La~a 91 (344)
..+.++++++.++| +|+.+||-|-. +|+.+
T Consensus 109 ~~l~~~~~~~~~~g~~~PiLGIC~G~Q-ll~~a 140 (315)
T 1l9x_A 109 KIFYNLSIQSFDDGDYFPVWGTCLGFE-ELSLL 140 (315)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEETHHHH-HHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEChHHH-HHHHH
Confidence 35677777776665 99999999995 88863
No 195
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=33.33 E-value=81 Score=27.27 Aligned_cols=40 Identities=15% Similarity=0.037 Sum_probs=25.9
Q ss_pred CCCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 158 DNSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 158 ~~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
.++.+|++++.+- |...-+.++.+.+.+.|+++.+.....
T Consensus 61 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~ 103 (332)
T 2o20_A 61 KRTTTVGVILPTITSTYFAAITRGVDDIASMYKYNMILANSDN 103 (332)
T ss_dssp -CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 3568999998752 233334466677778899987765443
No 196
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=32.60 E-value=49 Score=28.00 Aligned_cols=112 Identities=12% Similarity=0.048 Sum_probs=57.8
Q ss_pred ceeeeccceeeecC-CCCeEEEEeCC----CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeec---cccc
Q 019238 145 FTIAEFNPVQWTFD-NSPQILVPIAN----GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVAD---MLID 216 (344)
Q Consensus 145 ~~l~~~~~~~~~~~-~~~~v~ill~~----g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~---~~~~ 216 (344)
+.+.++..++.... .++||+++... ++...=+..+.+.+...|.+++++....- ++..... . .++ .-.+
T Consensus 18 ~~~~~~~~~~~~~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~~~-pl~~~d~-~-~~d~~~~l~~ 94 (247)
T 2q62_A 18 LRLPDSASLRPAFSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGL-PLPDAAP-V-SHPKVQELRE 94 (247)
T ss_dssp CCCCCGGGGCCCCCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTTC-CCTTSSC-T-TSHHHHHHHH
T ss_pred CCCCChhhhhhhccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhcC-CCCcCCC-C-CCHHHHHHHH
Confidence 34344443333322 46889888865 33333334456677777899998887652 4432111 0 111 1112
Q ss_pred cccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHH--------hcCCcEEEEcch
Q 019238 217 EAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQK--------ESNRPYGAICAS 264 (344)
Q Consensus 217 ~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~--------~~~k~I~aic~G 264 (344)
.+ .+.|+||+..-. ....-...+..||-+.. -++|+++.++++
T Consensus 95 ~i--~~AD~iI~~sP~---Yn~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~ts 145 (247)
T 2q62_A 95 LS--IWSEGQVWVSPE---RHGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVS 145 (247)
T ss_dssp HH--HHCSEEEEEEEC---SSSSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEEC
T ss_pred HH--HHCCEEEEEeCC---CCCCccHHHHHHHHHhhhccCcccccCCCEEEEEEeC
Confidence 22 567999985421 11112334444554443 257887777764
No 197
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=32.41 E-value=58 Score=27.90 Aligned_cols=44 Identities=16% Similarity=0.124 Sum_probs=33.1
Q ss_pred eeecCCCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCC
Q 019238 154 QWTFDNSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADK 198 (344)
Q Consensus 154 ~~~~~~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~ 198 (344)
++...++|||+|-=-||+...-+..+.+.|+. +.++.++++...
T Consensus 5 ~~~~~~~m~ILlTNDDGi~apGi~aL~~~l~~-~~~V~VVAP~~~ 48 (261)
T 3ty2_A 5 KKTATPKLRLLLSNDDGVYAKGLAILAKTLAD-LGEVDVVAPDRN 48 (261)
T ss_dssp ------CCEEEEECSSCTTCHHHHHHHHHHTT-TSEEEEEEESSC
T ss_pred hhccCCCCeEEEEcCCCCCCHHHHHHHHHHHh-cCCEEEEecCCC
Confidence 33344568888888889999999999999988 579999999764
No 198
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=32.26 E-value=68 Score=26.97 Aligned_cols=86 Identities=10% Similarity=0.017 Sum_probs=45.8
Q ss_pred CeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 161 PQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 161 ~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
++|++++.+- |...-+..+.+.+++.|+++.+...... +-. . ...++.......|.||+.+... .
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~-~~~-~-------~~~i~~l~~~~vdgiIi~~~~~--~- 69 (283)
T 2ioy_A 2 KTIGLVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQND-SSK-E-------LSNVEDLIQQKVDVLLINPVDS--D- 69 (283)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTC-HHH-H-------HHHHHHHHHTTCSEEEECCSST--T-
T ss_pred eEEEEEecCCCCHHHHHHHHHHHHHHHhcCcEEEEecCCCC-HHH-H-------HHHHHHHHHcCCCEEEEeCCch--h-
Confidence 5788888652 2333344556677788999877655432 100 0 0112222235689998865311 1
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
.+.+.++...+.+.|+..+..
T Consensus 70 -----~~~~~~~~~~~~~iPvV~~~~ 90 (283)
T 2ioy_A 70 -----AVVTAIKEANSKNIPVITIDR 90 (283)
T ss_dssp -----TTHHHHHHHHHTTCCEEEESS
T ss_pred -----hhHHHHHHHHHCCCeEEEecC
Confidence 112234444556777777653
No 199
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=32.14 E-value=62 Score=28.25 Aligned_cols=95 Identities=18% Similarity=0.092 Sum_probs=49.7
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCC-------ceeee-cc-ceeee---eccccccccCCCccEEE
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADK-------LEILA-SC-QVKLV---ADMLIDEAAKLSYDLIV 227 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~-------~~v~~-~~-g~~v~---~~~~~~~~~~~~~D~li 227 (344)
+|||+|+ --|..-.- +...|.+.|.++.++..+.- ..+.+ .. +..+. ...+.++. ..++|+||
T Consensus 2 ~mkI~Ii-GaGaiG~~---~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~-~~~~DlVi 76 (320)
T 3i83_A 2 SLNILVI-GTGAIGSF---YGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAEL-ETKPDCTL 76 (320)
T ss_dssp -CEEEEE-SCCHHHHH---HHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGC-SSCCSEEE
T ss_pred CCEEEEE-CcCHHHHH---HHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHc-CCCCCEEE
Confidence 4788876 34444432 34556778888888876431 01111 11 12211 11223333 13789999
Q ss_pred EcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchh
Q 019238 228 LPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASP 265 (344)
Q Consensus 228 ipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~ 265 (344)
+.==. . ..+.+++.|+.....+..|.++++|.
T Consensus 77 lavK~---~---~~~~~l~~l~~~l~~~t~Iv~~~nGi 108 (320)
T 3i83_A 77 LCIKV---V---EGADRVGLLRDAVAPDTGIVLISNGI 108 (320)
T ss_dssp ECCCC---C---TTCCHHHHHTTSCCTTCEEEEECSSS
T ss_pred EecCC---C---ChHHHHHHHHhhcCCCCEEEEeCCCC
Confidence 86421 1 12245556666566677888888884
No 200
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=31.86 E-value=27 Score=28.06 Aligned_cols=27 Identities=11% Similarity=0.033 Sum_probs=20.6
Q ss_pred HHHHHHHhhCCCEEEEEchhHHHHHHHcC
Q 019238 64 ESIVKKQASDGRLYAAICVFLAVALGSWG 92 (344)
Q Consensus 64 ~~~l~~~~~~g~~i~aiC~g~~~~La~aG 92 (344)
..+++ ..++++|+.+||-|-- +|+.+.
T Consensus 67 ~~l~~-~~~~~~PilGIC~G~Q-ll~~~~ 93 (192)
T 1i1q_B 67 PELLT-RLRGKLPIIGICLGHQ-AIVEAY 93 (192)
T ss_dssp HHHHH-HHBTTBCEEEETHHHH-HHHHHT
T ss_pred HHHHH-HHhcCCCEEEECcChH-HHHHHh
Confidence 34444 3568899999999994 999874
No 201
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=31.54 E-value=81 Score=26.68 Aligned_cols=87 Identities=11% Similarity=-0.001 Sum_probs=48.2
Q ss_pred CCeEEEEeCCC---cchhHHHHHHHHHHhcCC-eEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccch
Q 019238 160 SPQILVPIANG---SEEMEAVIIIDILRRAKA-NVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (344)
Q Consensus 160 ~~~v~ill~~g---~~~~e~~~~~~~l~~~~~-~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~ 235 (344)
+++|++++.+- |...-+..+.+.+++.|+ ++.+...... +-. ....++......+|.||+.+...
T Consensus 2 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~vdgiii~~~~~-- 70 (309)
T 2fvy_A 2 DTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQND-QSK--------QNDQIDVLLAKGVKALAINLVDP-- 70 (309)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHHHHTCTTEEEEEEECTTC-HHH--------HHHHHHHHHHTTCSEEEECCSSG--
T ss_pred CcEEEEEeccCCcHHHHHHHHHHHHHHHhcCCeEEEEecCCCC-HHH--------HHHHHHHHHHcCCCEEEEeCCCc--
Confidence 46899988652 333344566677778898 8876654432 100 00112333335789999976421
Q ss_pred HhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 236 QAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 236 ~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
. .....++...+.+.++..+..
T Consensus 71 ~------~~~~~~~~~~~~~iPvV~~~~ 92 (309)
T 2fvy_A 71 A------AAGTVIEKARGQNVPVVFFNK 92 (309)
T ss_dssp G------GHHHHHHHHHTTTCCEEEESS
T ss_pred c------hhHHHHHHHHHCCCcEEEecC
Confidence 1 112334445556788887765
No 202
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=31.19 E-value=1.2e+02 Score=25.35 Aligned_cols=37 Identities=8% Similarity=-0.193 Sum_probs=24.9
Q ss_pred CCCeEEEEeCC-C------cchhHHHHHHHHHHhcCCeEEEEEe
Q 019238 159 NSPQILVPIAN-G------SEEMEAVIIIDILRRAKANVVVASV 195 (344)
Q Consensus 159 ~~~~v~ill~~-g------~~~~e~~~~~~~l~~~~~~v~~~s~ 195 (344)
++++|++++.+ - |...-+..+.+.+++.|+++.+...
T Consensus 3 ~s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 46 (287)
T 3bbl_A 3 LSFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFPF 46 (287)
T ss_dssp CCCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred ceeEEEEEecccccccCChhHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 45789988765 2 3344445667778888999876543
No 203
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=31.18 E-value=26 Score=28.02 Aligned_cols=99 Identities=9% Similarity=0.028 Sum_probs=49.3
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHh---cCCeEEEEEeCCCceeeeccce-eeeec---cccccccCCCccEEEEcCCc
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRR---AKANVVVASVADKLEILASCQV-KLVAD---MLIDEAAKLSYDLIVLPGGL 232 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~---~~~~v~~~s~~~~~~v~~~~g~-~v~~~---~~~~~~~~~~~D~liipGG~ 232 (344)
+|||+++...--...--..+.+.+.+ .|.+++++.... .+....... ...++ ...+.+ .++|+||+..-.
T Consensus 6 ~Mkilii~gS~r~~g~t~~la~~i~~~l~~g~~v~~~dl~~-~p~~~~~~~~~~~~~~~~~~~~~l--~~aD~ii~~sP~ 82 (193)
T 1rtt_A 6 DIKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADISG-IPLYNEDVYALGFPPAVERFREQI--RAADALLFATPE 82 (193)
T ss_dssp -CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECCCTT-CCCCCHHHHTTCCCHHHHHHHHHH--HHCSEEEEECCE
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHhccCCCeEEEEeHHH-CCCCCccccccCCCHHHHHHHHHH--HhCCEEEEEccc
Confidence 46888887663221222233333332 367777776654 232111000 00111 112233 578999996542
Q ss_pred cchHhhhcCHHHHHHHHHHH------hcCCcEEEEcch
Q 019238 233 GGAQAFAKSKKLVNMLKKQK------ESNRPYGAICAS 264 (344)
Q Consensus 233 ~~~~~l~~~~~l~~~l~~~~------~~~k~I~aic~G 264 (344)
....-...+..||.+.. -++|+++.++++
T Consensus 83 ---y~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~ 117 (193)
T 1rtt_A 83 ---YNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGAS 117 (193)
T ss_dssp ---ETTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEEC
T ss_pred ---cccCcCHHHHHHHHHhccccCcccCCCeEEEEEeC
Confidence 11123556667777664 357888877765
No 204
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=31.12 E-value=59 Score=28.16 Aligned_cols=38 Identities=21% Similarity=0.070 Sum_probs=25.1
Q ss_pred CCCeEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEEEeC
Q 019238 159 NSPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVA 196 (344)
Q Consensus 159 ~~~~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~s~~ 196 (344)
++.+|++++.+ .|...-+.++.+.+.+.|+++.+....
T Consensus 59 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 99 (332)
T 2hsg_A 59 KTTTVGVIIPDISNIFYAELARGIEDIATMYKYNIILSNSD 99 (332)
T ss_dssp -CCEEEEEEC--CCSHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46789999864 333444456677778889998776543
No 205
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=30.97 E-value=76 Score=28.45 Aligned_cols=89 Identities=11% Similarity=0.091 Sum_probs=51.4
Q ss_pred CCeEEEEeCCCcchhH--HHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 160 SPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e--~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
.+||.|+-+...--.+ .-.+.+.+...|.+++++....- . ......++ .+||.|++...... ..
T Consensus 252 ~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~~~-~----------~~~~~~~~--~~~d~ii~gsp~~~-~~ 317 (402)
T 1e5d_A 252 TNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKAC-H----------HSQIMSEI--SDAGAVIVGSPTHN-NG 317 (402)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETTTS-C----------HHHHHHHH--HTCSEEEEECCCBT-TB
T ss_pred CCcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECCCC-C----------HHHHHHHH--HHCCEEEEECCccC-CC
Confidence 5788887766443333 23455667777777777665431 1 11112233 57999999765221 11
Q ss_pred hhcCHHHHHHHHHHHh---cCCcEEEEcch
Q 019238 238 FAKSKKLVNMLKKQKE---SNRPYGAICAS 264 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~---~~k~I~aic~G 264 (344)
..+.+.+++.+... ++|.++.+|+.
T Consensus 318 --~~~~~~~~l~~l~~~~l~~k~~~~f~t~ 345 (402)
T 1e5d_A 318 --ILPYVAGTLQYIKGLRPQNKIGGAFGSF 345 (402)
T ss_dssp --CCHHHHHHHHHHHHTCCCSCEEEEEEEE
T ss_pred --chHHHHHHHHHhhhcccCCCEEEEEEcC
Confidence 23356666666543 68888888765
No 206
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=30.29 E-value=44 Score=32.09 Aligned_cols=25 Identities=8% Similarity=0.033 Sum_probs=19.9
Q ss_pred HHHHHhhCCCEEEEEchhHHHHHHHc
Q 019238 66 IVKKQASDGRLYAAICVFLAVALGSW 91 (344)
Q Consensus 66 ~l~~~~~~g~~i~aiC~g~~~~La~a 91 (344)
+++...++|+|+.+||-|-- +|+.+
T Consensus 75 l~~~a~~~g~PvLGIC~G~Q-lLa~~ 99 (556)
T 3uow_A 75 VFEYFLEKKIPIFGICYGMQ-EIAVQ 99 (556)
T ss_dssp HHHHHHHTTCCEEEETHHHH-HHHHH
T ss_pred HHHHhhhcCCCEEEECHHHH-HHHHH
Confidence 44445677999999999994 89875
No 207
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=30.00 E-value=1.5e+02 Score=24.87 Aligned_cols=39 Identities=8% Similarity=-0.074 Sum_probs=26.7
Q ss_pred CCCCeEEEEeC----C---CcchhHHHHHHHHHHhcCCeEEEEEeC
Q 019238 158 DNSPQILVPIA----N---GSEEMEAVIIIDILRRAKANVVVASVA 196 (344)
Q Consensus 158 ~~~~~v~ill~----~---g~~~~e~~~~~~~l~~~~~~v~~~s~~ 196 (344)
.++++|++++. + .|...-+.++.+.+.+.|+++.++...
T Consensus 4 ~~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 49 (294)
T 3qk7_A 4 GRTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDE 49 (294)
T ss_dssp -CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35688999997 2 233344556677788889999887654
No 208
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=29.29 E-value=1.1e+02 Score=23.36 Aligned_cols=43 Identities=2% Similarity=-0.025 Sum_probs=23.6
Q ss_pred CCccEEEEcCCccchHhhhcCHHHHHHHHHHH---hcCCcEEEEcchh
Q 019238 221 LSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQK---ESNRPYGAICASP 265 (344)
Q Consensus 221 ~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~---~~~k~I~aic~G~ 265 (344)
.+||.|++......... ..+.+.+|+.... -++|.++.+|+|.
T Consensus 45 ~~~d~ii~g~p~y~~g~--~p~~~~~fl~~l~~~~l~~k~~~~f~tg~ 90 (169)
T 1obo_A 45 NDYQYLIIGCPTLNIGE--LQSDWEGLYSELDDVDFNGKLVAYFGTGD 90 (169)
T ss_dssp GGCSEEEEEEEEETTTE--ECHHHHHHHTTGGGCCCTTCEEEEEEECC
T ss_pred hhCCEEEEEEeeCCCCc--CCHHHHHHHHHhhhcCcCCCEEEEEEECC
Confidence 67999998543211111 1223444554432 3688888888763
No 209
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=29.28 E-value=70 Score=25.34 Aligned_cols=87 Identities=20% Similarity=0.191 Sum_probs=44.7
Q ss_pred CCeEEEEeCCCc-----chhHHHHHHHHHHhcC--CeEEEEEeCCCceeeeccc------e----eeee---------cc
Q 019238 160 SPQILVPIANGS-----EEMEAVIIIDILRRAK--ANVVVASVADKLEILASCQ------V----KLVA---------DM 213 (344)
Q Consensus 160 ~~~v~ill~~g~-----~~~e~~~~~~~l~~~~--~~v~~~s~~~~~~v~~~~g------~----~v~~---------~~ 213 (344)
||||+++...-- ...=+..+.+.+...| .+++++..... ++..-.+ . ...+ ..
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~-~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 79 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLAAN-PVPVLDGELVGAMRPGDAPLTPRQQDALALSDE 79 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTS-CCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCC-CCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHH
Confidence 367877776533 2222224556666665 88888887652 2210000 0 0001 01
Q ss_pred ccccccCCCccEEEEcCCccchHhhhcCHHHHHHHHHHH
Q 019238 214 LIDEAAKLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQK 252 (344)
Q Consensus 214 ~~~~~~~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~ 252 (344)
..+.+ .++|.||+..-. ....-...+..||.+..
T Consensus 80 ~~~~l--~~aD~iv~~~P~---y~~~~p~~lK~~iD~~~ 113 (201)
T 1t5b_A 80 LIAEL--KAHDVIVIAAPM---YNFNIPTQLKNYFDLIA 113 (201)
T ss_dssp HHHHH--HHCSEEEEECCC---BTTBCCHHHHHHHHHHC
T ss_pred HHHHH--HhCCEEEEEeCc---ccCcCCHHHHHHHHHhe
Confidence 12333 578999996542 12223556777887765
No 210
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=28.91 E-value=94 Score=26.02 Aligned_cols=87 Identities=9% Similarity=-0.005 Sum_probs=47.0
Q ss_pred CCCCeEEEEeCC--------CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEc
Q 019238 158 DNSPQILVPIAN--------GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLP 229 (344)
Q Consensus 158 ~~~~~v~ill~~--------g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liip 229 (344)
.++++|++++.+ .|...=+.++.+.+.+.|+++.+...... . .. ....++......+|.||+.
T Consensus 6 ~~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~-~~-------~~~~~~~~~~~~vdgiIi~ 76 (292)
T 3k4h_A 6 QTTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMSTGETE-E-EI-------FNGVVKMVQGRQIGGIILL 76 (292)
T ss_dssp -CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECCCCSH-H-HH-------HHHHHHHHHTTCCCEEEES
T ss_pred CCCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEEeCCCC-H-HH-------HHHHHHHHHcCCCCEEEEe
Confidence 356899999876 23333344667778888998876544331 1 00 0111222333567888886
Q ss_pred CCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 230 GGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 230 GG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
+... .+ +.++...+.+.++..+..
T Consensus 77 ~~~~------~~----~~~~~l~~~~iPvV~~~~ 100 (292)
T 3k4h_A 77 YSRE------ND----RIIQYLHEQNFPFVLIGK 100 (292)
T ss_dssp CCBT------TC----HHHHHHHHTTCCEEEESC
T ss_pred CCCC------Ch----HHHHHHHHCCCCEEEECC
Confidence 6421 11 233444455777766653
No 211
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=28.49 E-value=1.4e+02 Score=25.20 Aligned_cols=40 Identities=8% Similarity=-0.032 Sum_probs=26.5
Q ss_pred CCCCeEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 158 DNSPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 158 ~~~~~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
.++++|++++.+ .|...-+.++.+.+++.|+++.+.....
T Consensus 13 ~~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 55 (303)
T 3kke_A 13 SRSGTIGLIVPDVNNAVFADMFSGVQMAASGHSTDVLLGQIDA 55 (303)
T ss_dssp ----CEEEEESCTTSTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 346789999876 3444455677788888999998776544
No 212
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=28.45 E-value=29 Score=31.69 Aligned_cols=69 Identities=13% Similarity=0.035 Sum_probs=43.0
Q ss_pred cCCCCeEEEEeCCCcchhHHHHHHHHHHhc----CCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEE
Q 019238 157 FDNSPQILVPIANGSEEMEAVIIIDILRRA----KANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVL 228 (344)
Q Consensus 157 ~~~~~~v~ill~~g~~~~e~~~~~~~l~~~----~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~lii 228 (344)
..|+.+|+++--||.=..=......+|+.+ ++.+++....-|.......| ...|+.+++.+ .++|+++.
T Consensus 20 ~~M~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G-~~lp~~tl~~~--~~~daiL~ 92 (390)
T 3u1h_A 20 GAMKKKIAVLPGDGIGPEVMEAAIEVLKAVAERFGHEFEFEYGLIGGAAIDEAG-TPLPEETLDVC--RGSDAILL 92 (390)
T ss_dssp ----CEEEEEEESTTHHHHHHHHHHHHHHHHHHHSCCCEEEECCCTHHHHHSSS-SSSCHHHHHHH--HTSSEEEE
T ss_pred cCccceEEEECCCccCHHHHHHHHHHHHHHHHhcCCCeEEEEEEcCHHHHHhhC-CcCCHHHHHHH--HHCCEEEE
Confidence 345689999999998665555667777765 66665555544312222334 33566678888 67899888
No 213
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=27.66 E-value=80 Score=27.64 Aligned_cols=38 Identities=13% Similarity=0.005 Sum_probs=23.3
Q ss_pred CCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeC
Q 019238 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVA 196 (344)
Q Consensus 159 ~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~ 196 (344)
++++|++++.+- |...=+..+.+.+.+.||++.++...
T Consensus 65 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 105 (348)
T 3bil_A 65 RSNTIGVIVPSLINHYFAAMVTEIQSTASKAGLATIITNSN 105 (348)
T ss_dssp ---CEEEEESCSSSHHHHHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 457899998652 22333345666777889998776544
No 214
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=27.58 E-value=88 Score=26.29 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=27.2
Q ss_pred CCCCeEEEEeCC-----CcchhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 158 DNSPQILVPIAN-----GSEEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 158 ~~~~~v~ill~~-----g~~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
.++++|++++.+ .|...-+..+.+.+++.|+++.+.....
T Consensus 6 ~~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 50 (288)
T 3gv0_A 6 GKTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIH 50 (288)
T ss_dssp -CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCBSS
T ss_pred CCCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEecCCc
Confidence 356899999985 3444445566777778899987765543
No 215
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=27.45 E-value=70 Score=27.12 Aligned_cols=89 Identities=9% Similarity=-0.083 Sum_probs=51.4
Q ss_pred CCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCC-CceeeeccceeeeeccccccccCCCccEEEEcCCccch
Q 019238 160 SPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVAD-KLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (344)
Q Consensus 160 ~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~-~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~ 235 (344)
..+|++++.+- |...-+.++.+.+++.|+++.+..... +.+- .....++......+|+||+.+...
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~--------~~~~~i~~l~~~~vdgiii~~~~~-- 72 (297)
T 3rot_A 3 RDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGANDVP--------KQVQFIESALATYPSGIATTIPSD-- 72 (297)
T ss_dssp CCEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCSSSCCHH--------HHHHHHHHHHHTCCSEEEECCCCS--
T ss_pred eEEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCCCcCCHH--------HHHHHHHHHHHcCCCEEEEeCCCH--
Confidence 47899988763 333344566677778899998776541 0010 001123333335789999865421
Q ss_pred HhhhcCHHHHHHHHHHHhcCCcEEEEcch
Q 019238 236 QAFAKSKKLVNMLKKQKESNRPYGAICAS 264 (344)
Q Consensus 236 ~~l~~~~~l~~~l~~~~~~~k~I~aic~G 264 (344)
..+...+++..+.+.++..+...
T Consensus 73 ------~~~~~~~~~~~~~giPvV~~~~~ 95 (297)
T 3rot_A 73 ------TAFSKSLQRANKLNIPVIAVDTR 95 (297)
T ss_dssp ------STTHHHHHHHHHHTCCEEEESCC
T ss_pred ------HHHHHHHHHHHHCCCCEEEEcCC
Confidence 11233456666678888877643
No 216
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=27.36 E-value=1.3e+02 Score=24.98 Aligned_cols=38 Identities=5% Similarity=-0.056 Sum_probs=25.2
Q ss_pred CCCeEEEEeCC-----CcchhHHHHHHHHHHhcCCeEEEEEeC
Q 019238 159 NSPQILVPIAN-----GSEEMEAVIIIDILRRAKANVVVASVA 196 (344)
Q Consensus 159 ~~~~v~ill~~-----g~~~~e~~~~~~~l~~~~~~v~~~s~~ 196 (344)
++.+|++++.+ .|...-+.++.+.+.+.|+++.+....
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 60 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGK 60 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999865 233344456677788889998776543
No 217
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=27.12 E-value=3.1e+02 Score=23.82 Aligned_cols=101 Identities=10% Similarity=0.040 Sum_probs=61.2
Q ss_pred CeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeee----------ccceeeeeccccccccCCCccEEEEcC
Q 019238 161 PQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILA----------SCQVKLVADMLIDEAAKLSYDLIVLPG 230 (344)
Q Consensus 161 ~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~----------~~g~~v~~~~~~~~~~~~~~D~liipG 230 (344)
++|.|++-+|-+--+-..+...|...|++++++-+... .... ..|..+.+.. .......+|+||=.=
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~-~~~~~a~~~~~~~~~~g~~~~~~~--~~l~~~~~dlIIDAL 209 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFV-KMLESITNELSLFSKTQGQQVSSL--KDLPTSPVDLVINCL 209 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCS-SCCHHHHHHHHHHHTSSCEEESCS--TTSCSSCCSEEEEEC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCC-CCCHHHHHHHHHHHHcCCccccch--hhhccCCCCEEEECC
Confidence 68999999999999999999999999999988765431 1110 1233332211 111102345444211
Q ss_pred CccchHhhhcCHHHHHHHHHHHhcCCcEEEEcch
Q 019238 231 GLGGAQAFAKSKKLVNMLKKQKESNRPYGAICAS 264 (344)
Q Consensus 231 G~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G 264 (344)
|.+-...+...+.+.++|+...+.+.+|.|+.--
T Consensus 210 G~G~~~~l~~~~~~~~lI~~iN~~~~~VvAVDiP 243 (306)
T 3d3j_A 210 DCPENVFLRDQPWYKAAVAWANQNRAPVLSIDPP 243 (306)
T ss_dssp CCTTCGGGGGCHHHHHHHHHHHHSCCCEEEESCC
T ss_pred CCCCCCccCcchHHHHHHHHHHhcCCCEEEEECC
Confidence 2221222322356777777777788999999743
No 218
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=27.10 E-value=97 Score=26.66 Aligned_cols=87 Identities=11% Similarity=0.040 Sum_probs=45.8
Q ss_pred CCCeEEEEeCCCcch---hHHHHHHHHHHhc-CCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccc
Q 019238 159 NSPQILVPIANGSEE---MEAVIIIDILRRA-KANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGG 234 (344)
Q Consensus 159 ~~~~v~ill~~g~~~---~e~~~~~~~l~~~-~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~ 234 (344)
++.+|++++.+ .+. .-+.++.+.+.+. |+++.+...... +-. ....++......+|.||+.+..
T Consensus 5 ~~~~Igvi~~~-~~~~~~~~~~gi~~~a~~~~g~~l~i~~~~~~-~~~--------~~~~i~~l~~~~vdgiIi~~~~-- 72 (325)
T 2x7x_A 5 PHFRIGVAQCS-DDSWRHKMNDEILREAMFYNGVSVEIRSAGDD-NSK--------QAEDVHYFMDEGVDLLIISANE-- 72 (325)
T ss_dssp -CCEEEEEESC-CSHHHHHHHHHHHHHHTTSSSCEEEEEECTTC-HHH--------HHHHHHHHHHTTCSEEEECCSS--
T ss_pred CCeEEEEEecC-CCHHHHHHHHHHHHHHHHcCCcEEEEeCCCCC-HHH--------HHHHHHHHHHcCCCEEEEeCCC--
Confidence 46799999876 221 1223445556666 888877654432 100 0011222223568999987642
Q ss_pred hHhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 235 AQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 235 ~~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
.. .+.+.++...+.+.|+..+..
T Consensus 73 ~~------~~~~~~~~~~~~~iPvV~~~~ 95 (325)
T 2x7x_A 73 AA------PMTPIVEEAYQKGIPVILVDR 95 (325)
T ss_dssp HH------HHHHHHHHHHHTTCCEEEESS
T ss_pred HH------HHHHHHHHHHHCCCeEEEeCC
Confidence 11 122344445556778777654
No 219
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=26.26 E-value=74 Score=28.20 Aligned_cols=39 Identities=23% Similarity=0.192 Sum_probs=31.0
Q ss_pred CCCeEEEEeCCCc-chhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 159 NSPQILVPIANGS-EEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 159 ~~~~v~ill~~g~-~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
++|||+++.+++. ...-+..+...|.+.|.+|.+++...
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~ 60 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGD 60 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcc
Confidence 4589999988866 55556678889999999999998643
No 220
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=26.07 E-value=1e+02 Score=27.62 Aligned_cols=135 Identities=13% Similarity=0.013 Sum_probs=70.5
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhhh
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFA 239 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l~ 239 (344)
.+|+.|+.-++....-...+.+.|... +++..+...++.+-.+...+. ..-..+.+....+.|.||-.|| +..-+
T Consensus 34 ~~k~liVtd~~v~~~~~~~v~~~L~~~-~~~~~~~~~~ge~~k~~~~v~-~~~~~~~~~~~~r~d~iIalGG-Gsv~D-- 108 (368)
T 2gru_A 34 FDQYIMISDSGVPDSIVHYAAEYFGKL-APVHILRFQGGEEYKTLSTVT-NLQERAIALGANRRTAIVAVGG-GLTGN-- 108 (368)
T ss_dssp CSEEEEEEETTSCHHHHHHHHHHHTTT-SCEEEEEECCSGGGCSHHHHH-HHHHHHHHTTCCTTEEEEEEES-HHHHH--
T ss_pred CCEEEEEECCcHHHHHHHHHHHHHHhc-cceeEEEeCCCCCCCCHHHHH-HHHHHHHhcCCCCCcEEEEECC-hHHHH--
Confidence 478888887877766455566677666 676555444432211110000 0000111212245799997777 22322
Q ss_pred cCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCC-CCCCeeeeCcCchhhhccCCcCCCcEEEeCCeE
Q 019238 240 KSKKLVNMLKKQKESNRPYGAICASPALVLEPHGL-LKGKKATAFPAMCNKLSNQSEIENRVVVDGNLV 307 (344)
Q Consensus 240 ~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGl-L~g~~~T~~~~~~~~~~~~~~~~~~~v~dg~li 307 (344)
+-.++...+.++.++..|-+= + ||..+- ..++.+-.++..+.. ...++....++.|-.++
T Consensus 109 ----~ak~~Aa~~~rgip~i~IPTT--l-la~tdS~v~~kt~I~~~~~Kn~-ig~~~~P~~viiD~~~l 169 (368)
T 2gru_A 109 ----VAGVAAGMMFRGIALIHVPTT--F-LAASDSVLSIKQAVNLTSGKNL-VGFYYPPRFVFADTRIL 169 (368)
T ss_dssp ----HHHHHHHHBTTCCEEEEEECS--H-HHHHTTTSSCEEEEEETTEEEE-EEEECCCSEEEEEHHHH
T ss_pred ----HHHHHHHHhcCCCCEEEECCc--h-HhhcCCCcCCeEEEECCCceeE-eecCCCCCEEEEchHHH
Confidence 344555556789999999983 3 565443 344444444433221 12344555666665544
No 221
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=25.67 E-value=98 Score=26.92 Aligned_cols=87 Identities=7% Similarity=-0.080 Sum_probs=51.5
Q ss_pred CCeEEEEeCCC----cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccC--CCccEEEEcCCcc
Q 019238 160 SPQILVPIANG----SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAK--LSYDLIVLPGGLG 233 (344)
Q Consensus 160 ~~~v~ill~~g----~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~--~~~D~liipGG~~ 233 (344)
.++|++++.+- |+..-..++.+.+++.|+++.+...... .-. ....+++... ..+|+||+.+. .
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~-~~~--------~~~~i~~~i~~~~~vDgiIi~~~-~ 72 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAERD-PQN--------TLQQARELFQGRDKPDYLMLVNE-Q 72 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTC-HHH--------HHHHHHHHHHSSSCCSEEEEECC-S
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECCCC-HHH--------HHHHHHHHHhcCCCCCEEEEeCc-h
Confidence 47899988763 3334445666777788999988755442 100 0011222222 47899999652 1
Q ss_pred chHhhhcCHHHHHHHHHHHhcCCcEEEEcch
Q 019238 234 GAQAFAKSKKLVNMLKKQKESNRPYGAICAS 264 (344)
Q Consensus 234 ~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G 264 (344)
......+++..+.+.++..+...
T Consensus 73 --------~~~~~~~~~~~~~giPvV~~~~~ 95 (350)
T 3h75_A 73 --------YVAPQILRLSQGSGIKLFIVNSP 95 (350)
T ss_dssp --------SHHHHHHHHHTTSCCEEEEEESC
T ss_pred --------hhHHHHHHHHHhCCCcEEEEcCC
Confidence 12234566667788888887654
No 222
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=25.66 E-value=1.9e+02 Score=24.46 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=26.9
Q ss_pred CCeEEEEeCCCcchhHH-----HHHHHHHHhcCCeEEEEEeCC
Q 019238 160 SPQILVPIANGSEEMEA-----VIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~-----~~~~~~l~~~~~~v~~~s~~~ 197 (344)
++||+|+......+.++ ..+.+.+++.|+++..+..+.
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 47888776554444444 367788999999998887664
No 223
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=25.44 E-value=1.9e+02 Score=20.80 Aligned_cols=81 Identities=17% Similarity=0.083 Sum_probs=47.1
Q ss_pred CCCeEEEEeCCCcchhHHH-HHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 159 NSPQILVPIANGSEEMEAV-IIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~-~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
..+||.++..-|++..=+. -+.+.....|+++++.+..-+ .+++.. .+||++++.- .. .
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~---------------~~~~~~-~~~DvvLLgP---QV-~ 64 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYG---------------AHYDIM-GVYDLIILAP---QV-R 64 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETT---------------SCTTTG-GGCSEEEECG---GG-G
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchH---------------HHHhhc-cCCCEEEECh---HH-H
Confidence 4689999999997554433 334445556888887664322 122221 5799999831 11 1
Q ss_pred hhcCHHHHHHHHHHH-hcCCcEEEEcch
Q 019238 238 FAKSKKLVNMLKKQK-ESNRPYGAICAS 264 (344)
Q Consensus 238 l~~~~~l~~~l~~~~-~~~k~I~aic~G 264 (344)
...+-+++.. +.+++|..|-.-
T Consensus 65 -----y~~~~ik~~~~~~~ipV~vI~~~ 87 (108)
T 3nbm_A 65 -----SYYREMKVDAERLGIQIVATRGM 87 (108)
T ss_dssp -----GGHHHHHHHHTTTTCEEEECCHH
T ss_pred -----HHHHHHHHHhhhcCCcEEEeCHH
Confidence 1123344444 458999988754
No 224
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=25.44 E-value=1.4e+02 Score=23.96 Aligned_cols=87 Identities=15% Similarity=0.136 Sum_probs=43.9
Q ss_pred CCeEEEEeCC--CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 160 SPQILVPIAN--GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 160 ~~~v~ill~~--g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
.++|.|+-.. |....=.-.+.+.+...|+++++...+. ..++. .++|.+|+......-..
T Consensus 21 ~~kv~IvY~S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~~----------------~~~~l--~~~d~vi~g~~Ty~G~~ 82 (191)
T 1bvy_F 21 NTPLLVLYGSNMGTAEGTARDLADIAMSKGFAPQVATLDS----------------HAGNL--PREGAVLIVTASYNGHP 82 (191)
T ss_dssp CCCEEEEEECSSSHHHHHHHHHHHHHHTTTCCCEEEEGGG----------------STTCC--CSSSEEEEEECCBTTBC
T ss_pred CCeEEEEEECCChHHHHHHHHHHHHHHhCCCceEEeeHHH----------------hhhhh--hhCCeEEEEEeecCCCc
Confidence 4677776654 4333333355666777777766654432 01233 56788877544221111
Q ss_pred hhcCHHHHHHHHHHH---hcCCcEEEEcch
Q 019238 238 FAKSKKLVNMLKKQK---ESNRPYGAICAS 264 (344)
Q Consensus 238 l~~~~~l~~~l~~~~---~~~k~I~aic~G 264 (344)
..+-..++++|+... -+++.++.++.|
T Consensus 83 p~~~~~fl~~L~~~~~~~l~~~~~avfG~G 112 (191)
T 1bvy_F 83 PDNAKQFVDWLDQASADEVKGVRYSVFGCG 112 (191)
T ss_dssp CTTTHHHHHHHHTCCSSCCTTCCEEEEEEE
T ss_pred CHHHHHHHHHHHhccchhhCCCEEEEEEcc
Confidence 122334556655421 234666666555
No 225
>1wui_S Periplasmic [NIFE] hydrogenase small subunit; high resolution [NIFE]hydrogenase, oxidoreductase, NI-A state, unready state; HET: NFC; 1.04A {Desulfovibrio vulgaris str} SCOP: e.19.1.1 PDB: 1h2r_S 1ubj_S 1ubh_S 1ubl_S 1ubm_S 1ubo_S 1ubr_S 1ubt_S 1ubu_S 1wuh_S* 1ubk_S* 1wuj_S 1wuk_S 1wul_S 1e3d_A*
Probab=25.40 E-value=49 Score=28.48 Aligned_cols=44 Identities=11% Similarity=0.122 Sum_probs=31.1
Q ss_pred CCCccEEEEcCCccchHh----hhcCHHHHHHHHHHHhcCCcEEEEcch
Q 019238 220 KLSYDLIVLPGGLGGAQA----FAKSKKLVNMLKKQKESNRPYGAICAS 264 (344)
Q Consensus 220 ~~~~D~liipGG~~~~~~----l~~~~~l~~~l~~~~~~~k~I~aic~G 264 (344)
+.+ |+++|-|....... ....+..+++++++.++.|.|.|+++=
T Consensus 67 p~~-Dil~VeG~V~~~~~g~~~~~~g~~~l~~~~e~~~~ak~VIAvGsC 114 (267)
T 1wui_S 67 PHG-FIAVVEGGIPTAANGIYGKVANHTMLDICSRILPKAQAVIAYGTC 114 (267)
T ss_dssp TTC-EEEEEESBEECGGGGTTBEETTEEHHHHHHHHGGGSSEEEEESHH
T ss_pred CCC-eEEEEeCCCccCCCcceeecCChHHHHHHHHHhccCCEEEEeeec
Confidence 356 99999998532111 111246799999999999999999753
No 226
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=25.26 E-value=65 Score=27.14 Aligned_cols=40 Identities=15% Similarity=0.041 Sum_probs=27.2
Q ss_pred CCCCeEEEEeCCCc---chhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 158 DNSPQILVPIANGS---EEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 158 ~~~~~v~ill~~g~---~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
.++++|++++.+-. ...-+..+.+.+.+.|+++.++....
T Consensus 6 ~~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 48 (291)
T 3egc_A 6 KRSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAE 48 (291)
T ss_dssp -CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 35689999987632 23334466777888899998877654
No 227
>3i9v_6 NADH-quinone oxidoreductase subunit 6; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_6* 2fug_6* 3iam_6* 3ias_6* 3m9s_6*
Probab=25.08 E-value=47 Score=26.72 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=29.2
Q ss_pred CCCccEEEEcCCccchHhhhcCHHHHHHHHHHHhcCCcEEEEcch
Q 019238 220 KLSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQKESNRPYGAICAS 264 (344)
Q Consensus 220 ~~~~D~liipGG~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G 264 (344)
+.+.|+++|-|.... +....++.+.++..+-|+|.|+++=
T Consensus 72 PrqaDiliVeG~Vt~-----~m~~~l~~~~e~~p~pk~VIAvGsC 111 (181)
T 3i9v_6 72 PRQADVMIVAGRLSK-----KMAPVMRRVWEQMPDPKWVISMGAC 111 (181)
T ss_dssp --CCCCEEEESCCBT-----TTHHHHHHHHHSSCSSCCEEEEHHH
T ss_pred CCCceEEEEeccCCc-----ccHHHHHHHHHHcCCCceEEEeecc
Confidence 467899999998531 3345677888888889999999853
No 228
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=24.84 E-value=81 Score=27.40 Aligned_cols=39 Identities=3% Similarity=-0.108 Sum_probs=25.8
Q ss_pred CCCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeC
Q 019238 158 DNSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVA 196 (344)
Q Consensus 158 ~~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~ 196 (344)
.++.+|++++.+- |...-+.++.+.+.+.|+++.+....
T Consensus 56 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 97 (340)
T 1qpz_A 56 NHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAW 97 (340)
T ss_dssp TCCSEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3568999998753 22333345667777889998776544
No 229
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=24.48 E-value=1e+02 Score=26.07 Aligned_cols=86 Identities=9% Similarity=-0.014 Sum_probs=47.1
Q ss_pred CCCeEEEEeC--------CCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcC
Q 019238 159 NSPQILVPIA--------NGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPG 230 (344)
Q Consensus 159 ~~~~v~ill~--------~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipG 230 (344)
++++|++++. +.|...=+.++.+.+++.||++.+...... . . .....++.......|.||+.+
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~~~-~-~-------~~~~~~~~l~~~~vdGiI~~~ 76 (295)
T 3hcw_A 6 QTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNM-N-D-------LMDEVYKMIKQRMVDAFILLY 76 (295)
T ss_dssp CSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTCEEEECCCCSH-H-H-------HHHHHHHHHHTTCCSEEEESC
T ss_pred CCcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCCEEEEEcCCCC-h-H-------HHHHHHHHHHhCCcCEEEEcC
Confidence 5689999983 234444455677778888999876554321 0 0 000112233335688888875
Q ss_pred CccchHhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 231 GLGGAQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 231 G~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
... +... ++...+.+.++..+..
T Consensus 77 ~~~-------~~~~---~~~l~~~~iPvV~i~~ 99 (295)
T 3hcw_A 77 SKE-------NDPI---KQMLIDESMPFIVIGK 99 (295)
T ss_dssp CCT-------TCHH---HHHHHHTTCCEEEESC
T ss_pred ccc-------ChHH---HHHHHhCCCCEEEECC
Confidence 421 1122 3333455777776653
No 230
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=24.46 E-value=2e+02 Score=24.02 Aligned_cols=62 Identities=15% Similarity=0.108 Sum_probs=35.5
Q ss_pred CCCeEEEEeCCCc---chhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC
Q 019238 159 NSPQILVPIANGS---EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 159 ~~~~v~ill~~g~---~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG 231 (344)
++++|++++ +-. ...-+.++.+.+++.|+++.+...... . . ....++......+|.||+.+.
T Consensus 11 ~~~~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~-~-------~--~~~~~~~l~~~~vdgiIi~~~ 75 (289)
T 3k9c_A 11 SSRLLGVVF-ELQQPFHGDLVEQIYAAATRRGYDVMLSAVAPS-R-------A--EKVAVQALMRERCEAAILLGT 75 (289)
T ss_dssp --CEEEEEE-ETTCHHHHHHHHHHHHHHHHTTCEEEEEEEBTT-B-------C--HHHHHHHHTTTTEEEEEEETC
T ss_pred CCCEEEEEE-ecCCchHHHHHHHHHHHHHHCCCEEEEEeCCCC-H-------H--HHHHHHHHHhCCCCEEEEECC
Confidence 468899998 522 233344566777788999988776552 1 0 011223333356777777654
No 231
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=24.43 E-value=13 Score=29.52 Aligned_cols=64 Identities=14% Similarity=0.178 Sum_probs=48.9
Q ss_pred ChHHHHHHHHHhhCCCEEEEEchhHHHHHHHcCCCCCCC-----------CCCEEcCCCCCcHHHHHHHHHHHHcC
Q 019238 60 SEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------DGKVVTTRGPGTPMEFVVALVEQLYG 124 (344)
Q Consensus 60 ~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------dg~~iT~~g~~~~~~~~~~lv~~~~g 124 (344)
++.+...-+.|.+.+..-.+.|+-. ++++...||+..+ +||+.-|.|.....+......+...+
T Consensus 83 ~~~l~pvq~a~~~~~~~QCG~CtpG-~imsa~all~~~~~pt~~ei~~~l~gnlCRCtgY~~I~~Av~~~a~~~~~ 157 (163)
T 1ffv_A 83 KGVLHAVQEGFYKEHGLQCGFCTPG-MLMRAYRFLQENPNPTEAEIRMGMTGNLCRCTGYQNIVKAVQYAARKLQE 157 (163)
T ss_dssp TTBCCHHHHHHHHTTCCSSCSSHHH-HHHHHHHHHHHCSSCCHHHHHHHTTTCCCSSSCSHHHHHHHHHHHHHHTC
T ss_pred CCCcCHHHHHHHHhCCccCccccHh-HHHHHHHHHHcCCCCCHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHhcc
Confidence 3445566666777888889999999 5999999987554 89999999998777776666554433
No 232
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=24.38 E-value=1.9e+02 Score=20.56 Aligned_cols=77 Identities=16% Similarity=0.034 Sum_probs=38.4
Q ss_pred CCCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHhh
Q 019238 159 NSPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAF 238 (344)
Q Consensus 159 ~~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~l 238 (344)
++++|.|+--+ ......+...|...|+++..++... . .+.......+|++++|+..
T Consensus 17 ~~~~ilivdd~---~~~~~~l~~~L~~~g~~v~~~~~~~--~-------------al~~l~~~~~dlvi~~~~~------ 72 (137)
T 2pln_A 17 GSMRVLLIEKN---SVLGGEIEKGLNVKGFMADVTESLE--D-------------GEYLMDIRNYDLVMVSDKN------ 72 (137)
T ss_dssp TCSEEEEECSC---HHHHHHHHHHHHHTTCEEEEESCHH--H-------------HHHHHHHSCCSEEEECSTT------
T ss_pred CCCeEEEEeCC---HHHHHHHHHHHHHcCcEEEEeCCHH--H-------------HHHHHHcCCCCEEEEcCcc------
Confidence 45676554332 2233456677888888776332211 1 1222222468998844321
Q ss_pred hcCHHHHHHHHHHHhcCCcEEEEc
Q 019238 239 AKSKKLVNMLKKQKESNRPYGAIC 262 (344)
Q Consensus 239 ~~~~~l~~~l~~~~~~~k~I~aic 262 (344)
.-.+++.|++. ....+|..+.
T Consensus 73 --g~~~~~~l~~~-~~~~~ii~ls 93 (137)
T 2pln_A 73 --ALSFVSRIKEK-HSSIVVLVSS 93 (137)
T ss_dssp --HHHHHHHHHHH-STTSEEEEEE
T ss_pred --HHHHHHHHHhc-CCCccEEEEe
Confidence 12456677765 2145555444
No 233
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=24.16 E-value=92 Score=26.89 Aligned_cols=88 Identities=3% Similarity=-0.136 Sum_probs=48.0
Q ss_pred CCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCC--ccEEEEcCCcc
Q 019238 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLS--YDLIVLPGGLG 233 (344)
Q Consensus 159 ~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~--~D~liipGG~~ 233 (344)
++.+|++++.+- |...-+..+.+.+.+.|+++.+...... +-. ....++...... +|.||+.+..
T Consensus 4 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~~~~~-~~~--------~~~~i~~l~~~~~~vdgiIi~~~~- 73 (332)
T 2rjo_A 4 GQTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYVPLTTEGS-SEK--------GIADIRALLQKTGGNLVLNVDPND- 73 (332)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCCEEEEECTTC-HHH--------HHHHHHHHHHHTTTCEEEEECCSS-
T ss_pred CccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCEEEEecCCCC-HHH--------HHHHHHHHHHCCCCCCEEEEeCCC-
Confidence 467899998752 2223334566677778999877654432 100 001122222245 8999997642
Q ss_pred chHhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 234 GAQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 234 ~~~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
.. ...+.++...+.+.++..+..
T Consensus 74 -~~------~~~~~~~~~~~~~iPvV~~~~ 96 (332)
T 2rjo_A 74 -SA------DARVIVEACSKAGAYVTTIWN 96 (332)
T ss_dssp -HH------HHHHHHHHHHHHTCEEEEESC
T ss_pred -HH------HHHHHHHHHHHCCCeEEEECC
Confidence 11 122344444456778777754
No 234
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=23.81 E-value=1.6e+02 Score=24.55 Aligned_cols=38 Identities=21% Similarity=0.072 Sum_probs=25.3
Q ss_pred CCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeC
Q 019238 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVA 196 (344)
Q Consensus 159 ~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~ 196 (344)
++++|++++.+- |...-+..+.+.+++.|+++.+....
T Consensus 15 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 55 (289)
T 2fep_A 15 KTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSD 55 (289)
T ss_dssp -CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCeEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 468999999752 23333456667778889998776544
No 235
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=23.54 E-value=89 Score=25.83 Aligned_cols=87 Identities=11% Similarity=0.082 Sum_probs=48.5
Q ss_pred eEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCC-ccEEEEcCCccchHh
Q 019238 162 QILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQA 237 (344)
Q Consensus 162 ~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~-~D~liipGG~~~~~~ 237 (344)
+|++++.+ .|...-+..+.+.+++.|+++.+........... ....++...... +|.||+.+...
T Consensus 2 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~i~~l~~~~~vdgii~~~~~~---- 70 (276)
T 3ksm_A 2 KLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLLHRSTKDDGDIAG-------QIQILSYHLSQAPPDALILAPNSA---- 70 (276)
T ss_dssp EEEEECSCSSSTHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHH-------HHHHHHHHHHHSCCSEEEECCSST----
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCCCHHH-------HHHHHHHHHHhCCCCEEEEeCCCH----
Confidence 78888765 3444445567777888899988776432101000 001122222245 89999976421
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
....+.+++..+.+.++..+..
T Consensus 71 ----~~~~~~~~~~~~~~ipvV~~~~ 92 (276)
T 3ksm_A 71 ----EDLTPSVAQYRARNIPVLVVDS 92 (276)
T ss_dssp ----TTTHHHHHHHHHTTCCEEEESS
T ss_pred ----HHHHHHHHHHHHCCCcEEEEec
Confidence 1122345556666888887754
No 236
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=23.49 E-value=61 Score=25.38 Aligned_cols=43 Identities=7% Similarity=-0.034 Sum_probs=24.2
Q ss_pred CCccEEEEcCCccchHhhhcCHHHHHHHHHH---HhcCCcEEEEcchh
Q 019238 221 LSYDLIVLPGGLGGAQAFAKSKKLVNMLKKQ---KESNRPYGAICASP 265 (344)
Q Consensus 221 ~~~D~liipGG~~~~~~l~~~~~l~~~l~~~---~~~~k~I~aic~G~ 265 (344)
.+||.|++......... -.+.+.+|+... .-++|.++.+|+|.
T Consensus 44 ~~~d~ii~g~pt~~~G~--~p~~~~~f~~~l~~~~l~gk~vavfg~g~ 89 (175)
T 1ag9_A 44 EAYDILLLGIPTWYYGE--AQCDWDDFFPTLEEIDFNGKLVALFGCGD 89 (175)
T ss_dssp HTCSEEEEECCEETTTE--ECHHHHHHHHHHTTCCCTTCEEEEEEECC
T ss_pred hhCCEEEEEEeecCCCc--ChHHHHHHHhhhhhcccCCCEEEEEEECC
Confidence 67999998654211111 223344455443 34578888888753
No 237
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=23.48 E-value=89 Score=26.84 Aligned_cols=88 Identities=10% Similarity=-0.000 Sum_probs=47.9
Q ss_pred CCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 160 SPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 160 ~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+++|++++.+- |...-...+.+.+++.|+++.+...... .... . ...++.......|+|++.+...
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~-d~~~----q---~~~i~~li~~~vdgiii~~~~~--- 71 (316)
T 1tjy_A 3 AERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEP-SVSG----Q---VQLVNNFVNQGYDAIIVSAVSP--- 71 (316)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCEEEECCCSSC-CHHH----H---HHHHHHHHHTTCSEEEECCSSS---
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHhCCEEEEECCCCC-CHHH----H---HHHHHHHHHcCCCEEEEeCCCH---
Confidence 47899998652 3334445666677778888876532221 1000 0 0112333235789999865421
Q ss_pred hhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 237 AFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
..+...+++..+.+.++..+..
T Consensus 72 -----~~~~~~~~~a~~~gipvV~~d~ 93 (316)
T 1tjy_A 72 -----DGLCPALKRAMQRGVKILTWDS 93 (316)
T ss_dssp -----STTHHHHHHHHHTTCEEEEESS
T ss_pred -----HHHHHHHHHHHHCcCEEEEecC
Confidence 1123345555667888877754
No 238
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=23.41 E-value=2.4e+02 Score=23.41 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=25.4
Q ss_pred CCCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeC
Q 019238 158 DNSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVA 196 (344)
Q Consensus 158 ~~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~ 196 (344)
.++++|++++.+- |...-+..+.+.+++.|+++.+....
T Consensus 6 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 47 (285)
T 3c3k_A 6 AKTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCNTE 47 (285)
T ss_dssp -CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3568999998752 22333345666777889998776544
No 239
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=22.44 E-value=1.4e+02 Score=26.52 Aligned_cols=92 Identities=14% Similarity=0.080 Sum_probs=46.4
Q ss_pred CCeEEEEeCCCc--chhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchHh
Q 019238 160 SPQILVPIANGS--EEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQA 237 (344)
Q Consensus 160 ~~~v~ill~~g~--~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~~ 237 (344)
.+++.|+-+... ...=+-.+.+.+...|.+++++..... . ......++ .++|.+++.........
T Consensus 251 ~~~i~i~y~S~~GnT~~lA~~ia~~l~~~g~~v~~~~~~~~-~----------~~~~~~~~--~~~d~ii~g~p~y~~~~ 317 (398)
T 1ycg_A 251 KAKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLSVS-D----------RNDVIKEI--LDARAVLVGSPTINNDI 317 (398)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGS-C----------HHHHHHHH--HHCSEEEEECCCBTTBC
T ss_pred cCeEEEEEECCccHHHHHHHHHHHHHHhcCCeEEEEECCCC-C----------HHHHHHHH--HHCCEEEEECCccCccc
Confidence 467777665533 332233455666667777776665421 0 01111222 57899999754211111
Q ss_pred hhcCHHHHHHHHHHHhcCCcEEEEcch
Q 019238 238 FAKSKKLVNMLKKQKESNRPYGAICAS 264 (344)
Q Consensus 238 l~~~~~l~~~l~~~~~~~k~I~aic~G 264 (344)
...-..+++++....-++|+++.++++
T Consensus 318 ~~~~~~~l~~l~~~~~~~k~~~~~~s~ 344 (398)
T 1ycg_A 318 LPVVSPLLDDLVGLRPKNKVGLAFGAY 344 (398)
T ss_dssp CGGGHHHHHHHHHHCCSSCEEEEEEEE
T ss_pred hHHHHHHHHHHhccccCCCEEEEEEeC
Confidence 112233444444333378888888764
No 240
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=22.39 E-value=36 Score=29.74 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=27.6
Q ss_pred cCChHHHHHHHHHhhCC-CEEEEEchhHHHHHHHc
Q 019238 58 KESEVLESIVKKQASDG-RLYAAICVFLAVALGSW 91 (344)
Q Consensus 58 ~~~~~~~~~l~~~~~~g-~~i~aiC~g~~~~La~a 91 (344)
.....+.+.|++.+++| .++++.|+|+. ++...
T Consensus 128 l~~t~l~~~L~~~~~~G~~~~~GtSAGA~-i~~~~ 161 (291)
T 3en0_A 128 LADTPLMDRIRQRVHNGEISLAGTSAGAA-VMGHH 161 (291)
T ss_dssp HTTCHHHHHHHHHHHTTSSEEEEETHHHH-TTSSE
T ss_pred HHhCCHHHHHHHHHHCCCeEEEEeCHHHH-hhhHh
Confidence 45678889999999999 89999999995 66543
No 241
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=22.37 E-value=11 Score=29.85 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=43.0
Q ss_pred HHHHHhhCCCEEEEEchhHHHHHHHcCCCCCCC-----------CCCEEcCCCCCcHHHHHHHHHHHHc
Q 019238 66 IVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------DGKVVTTRGPGTPMEFVVALVEQLY 123 (344)
Q Consensus 66 ~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------dg~~iT~~g~~~~~~~~~~lv~~~~ 123 (344)
.-+.+.+.+..-.+.|+.. +++....+|++.+ +||+.-|.|.....+......+...
T Consensus 88 ~q~a~~~~~~~qCG~Ctpg-~im~a~~ll~~~~~pt~~~i~~~l~gnlcRCtgy~~i~~A~~~~~~~~~ 155 (161)
T 1rm6_C 88 LQAAFHEKLGTQCGFCTPG-MIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVKIIKSVETAAAARL 155 (161)
T ss_dssp HHHHHHHHTCCSSCSSHHH-HHHHHHHHHHHCSSCCHHHHHHHTTTCCCSSSCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCCCchH-HHHHHHHHHhcCCCCCHHHHHHHHcCCeECCCCCHHHHHHHHHHHHHHh
Confidence 3444555566889999999 5999988886544 8999999999887777766655443
No 242
>1yqw_A Periplasmic [NIFE] hydrogenase small subunit; NI-Fe hydrogenase unready state, oxidoreductase; 1.83A {Desulfovibrio fructosovorans} PDB: 3cur_A 3cus_A 3h3x_A 1yrq_A 1frf_S
Probab=22.36 E-value=68 Score=27.52 Aligned_cols=43 Identities=16% Similarity=0.215 Sum_probs=30.9
Q ss_pred CCccEEEEcCCccchHh----hhcCHHHHHHHHHHHhcCCcEEEEcch
Q 019238 221 LSYDLIVLPGGLGGAQA----FAKSKKLVNMLKKQKESNRPYGAICAS 264 (344)
Q Consensus 221 ~~~D~liipGG~~~~~~----l~~~~~l~~~l~~~~~~~k~I~aic~G 264 (344)
.. |+++|-|....... ....+..+++++++..+.|.|.|+++=
T Consensus 68 ~~-dil~VeG~V~~~~~g~~~~~~g~~~~~~~~~~~~~~k~VIA~GsC 114 (264)
T 1yqw_A 68 DG-YYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTC 114 (264)
T ss_dssp TC-EEEEEESBEECGGGGTTBEETTEEHHHHHHHHHHTCSCEEEESHH
T ss_pred CC-eEEEEeCCcccCCCccceeeCChHHHHHHHHHhcCCCEEEEeccc
Confidence 45 99999997532111 112346789999999999999999854
No 243
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=22.31 E-value=87 Score=26.61 Aligned_cols=38 Identities=18% Similarity=0.185 Sum_probs=32.9
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCC
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADK 198 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~ 198 (344)
+|||+|-=-||+...-+..+.+.|+..| ++.++++...
T Consensus 1 ~M~ILlTNDDGi~apGi~aL~~~l~~~g-~V~VVAP~~~ 38 (251)
T 2phj_A 1 MPTFLLVNDDGYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp -CEEEEECSSCTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 3788888888999999999999999998 9999999764
No 244
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=22.22 E-value=43 Score=28.40 Aligned_cols=86 Identities=13% Similarity=0.004 Sum_probs=49.1
Q ss_pred CCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCC--CceeeeccceeeeeccccccccCCCccEEEEcCCcc
Q 019238 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVAD--KLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLG 233 (344)
Q Consensus 159 ~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~--~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~ 233 (344)
++++|++++.+- |...-+..+.+.+++.|+++.++.... . +-. ....++......+|.||+.+...
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~vdgiii~~~~~ 74 (304)
T 3o1i_D 4 SDEKICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGGYPN-KSR--------QEQQLALCTQWGANAIILGTVDP 74 (304)
T ss_dssp -CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSSTTC-HHH--------HHHHHHHHHHHTCSEEEECCSST
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCCCCC-HHH--------HHHHHHHHHHcCCCEEEEeCCCh
Confidence 468999998763 333334566677778899998877654 2 100 00112222234689999876421
Q ss_pred chHhhhcCHHHHHHHHHHHhcCCcEEEEc
Q 019238 234 GAQAFAKSKKLVNMLKKQKESNRPYGAIC 262 (344)
Q Consensus 234 ~~~~l~~~~~l~~~l~~~~~~~k~I~aic 262 (344)
.. +.+.+++.. ++.++..+.
T Consensus 75 --~~------~~~~~~~~~-~~iPvV~~~ 94 (304)
T 3o1i_D 75 --HA------YEHNLKSWV-GNTPVFATV 94 (304)
T ss_dssp --TS------STTTHHHHT-TTSCEEECS
T ss_pred --hH------HHHHHHHHc-CCCCEEEec
Confidence 11 111245555 788888874
No 245
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=21.99 E-value=14 Score=29.33 Aligned_cols=62 Identities=16% Similarity=0.066 Sum_probs=47.0
Q ss_pred ChHHHHHHHHHhhCCCEEEEEchhHHHHHHHcCCCCCCC-----------CCCEEcCCCCCcHHHHHHHHHHHH
Q 019238 60 SEVLESIVKKQASDGRLYAAICVFLAVALGSWGLLKGLK-----------DGKVVTTRGPGTPMEFVVALVEQL 122 (344)
Q Consensus 60 ~~~~~~~l~~~~~~g~~i~aiC~g~~~~La~aGll~g~~-----------dg~~iT~~g~~~~~~~~~~lv~~~ 122 (344)
++.+...-+.|.+.+..=.+.|+-. ++++...||+..+ +||+--|.|.....+......++.
T Consensus 83 ~~~l~pvq~af~~~~~~QCGfCtpG-~ims~~all~~~~~pt~~eI~~al~GNlCRCtgY~~I~~Av~~aa~~~ 155 (160)
T 3hrd_D 83 DGKPSLLQQCFLEAGAVQCGYCTPG-MILTAKALLDKNPDPTDEEITVAMSGNLCRCTGYIKIHAAVRYAVERC 155 (160)
T ss_dssp TTBCCHHHHHHHHHTCCSSCSSHHH-HHHHHHHHHTTCSSCCHHHHHHHHTTCCCSSSCSHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHcCCCcCCcchhh-HHHHHHHHHHhCCCCCHHHHHHHHcCCCCCCCCcHHHHHHHHHHHHHh
Confidence 3344556666777777789999999 5999999998765 899999999987766665555443
No 246
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=21.81 E-value=2.2e+02 Score=23.69 Aligned_cols=35 Identities=11% Similarity=0.063 Sum_probs=23.9
Q ss_pred CCCeEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEE
Q 019238 159 NSPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVA 193 (344)
Q Consensus 159 ~~~~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~ 193 (344)
++++|++++.+ .|...-+..+.+.+++.|+++.+.
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~ 44 (290)
T 3clk_A 7 SSNVIAAVVSSVRTNFAQQILDGIQEEAHKNGYNLIIV 44 (290)
T ss_dssp -CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEE
Confidence 46789999865 233444456677778889998776
No 247
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=21.48 E-value=53 Score=28.80 Aligned_cols=31 Identities=23% Similarity=0.100 Sum_probs=25.5
Q ss_pred hHHHHHHHHHhhCCCEEEEEchhHHHH-HHHcC
Q 019238 61 EVLESIVKKQASDGRLYAAICVFLAVA-LGSWG 92 (344)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~-La~aG 92 (344)
+++.+++++..++++++.+||-|.- + +..+|
T Consensus 122 ~el~~li~~~~~~~~~~lgIC~GaQ-~~l~~~~ 153 (301)
T 2vdj_A 122 EELKRIMEYSKTNVTSTLHICWGAQ-AGLYHHY 153 (301)
T ss_dssp HHHHHHHHHHHHHEEEEEEETHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEcHHHH-HHHHHhC
Confidence 6788888888899999999999995 6 44444
No 248
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=21.38 E-value=53 Score=28.96 Aligned_cols=31 Identities=23% Similarity=0.087 Sum_probs=25.5
Q ss_pred hHHHHHHHHHhhCCCEEEEEchhHHHH-HHHcC
Q 019238 61 EVLESIVKKQASDGRLYAAICVFLAVA-LGSWG 92 (344)
Q Consensus 61 ~~~~~~l~~~~~~g~~i~aiC~g~~~~-La~aG 92 (344)
+++.+++++..++++++.+||-|.- + +..+|
T Consensus 134 ~el~~li~~~~~~~~p~LGIC~GaQ-~~l~~~~ 165 (312)
T 2h2w_A 134 EELTEIMEWSRHNVYSTMFICWAAQ-AGLYYFY 165 (312)
T ss_dssp HHHHHHHHHHHHHEEEEEEETHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEECHHHH-HHHHHhC
Confidence 6788888888899999999999995 6 44444
No 249
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=21.20 E-value=57 Score=27.37 Aligned_cols=37 Identities=0% Similarity=-0.286 Sum_probs=23.9
Q ss_pred CCCeEEEEeCCC-----cchhHHHHHHHHHHhcCCeEEEEEe
Q 019238 159 NSPQILVPIANG-----SEEMEAVIIIDILRRAKANVVVASV 195 (344)
Q Consensus 159 ~~~~v~ill~~g-----~~~~e~~~~~~~l~~~~~~v~~~s~ 195 (344)
++++|++++.+- |...-+.++.+.+++.|+++.++..
T Consensus 4 ~~~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 45 (289)
T 3brs_A 4 KQYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIKLEFMAP 45 (289)
T ss_dssp -CCEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTCEEEECCC
T ss_pred CCcEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 457899988642 2233344566677778999877655
No 250
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=21.09 E-value=1.2e+02 Score=25.63 Aligned_cols=86 Identities=12% Similarity=-0.098 Sum_probs=49.7
Q ss_pred CCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 160 SPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 160 ~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+.+|++++.+- |...-+..+.+.+++.|+++.++... . +-. ....++......+|.||+.+...
T Consensus 2 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-~-~~~--------~~~~i~~l~~~~vdgiii~~~~~--- 68 (306)
T 8abp_A 2 NLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVP-D-GEK--------TLNAIDSLAASGAKGFVICTPDP--- 68 (306)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEECC-S-HHH--------HHHHHHHHHHTTCCEEEEECSCG---
T ss_pred CeEEEEEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCCC-C-HHH--------HHHHHHHHHHcCCCEEEEeCCCc---
Confidence 36889888763 33334445667777788888766542 1 100 01123333335689999976421
Q ss_pred hhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 237 AFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
......+++..+.+.|+..+.+
T Consensus 69 -----~~~~~~~~~~~~~~iPvV~~~~ 90 (306)
T 8abp_A 69 -----KLGSAIVAKARGYDMKVIAVDD 90 (306)
T ss_dssp -----GGHHHHHHHHHHTTCEEEEESS
T ss_pred -----hhhHHHHHHHHHCCCcEEEeCC
Confidence 1223445566677889888874
No 251
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=20.87 E-value=1.5e+02 Score=24.75 Aligned_cols=86 Identities=10% Similarity=-0.070 Sum_probs=46.2
Q ss_pred CeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEE--eCCCceeeeccceeeeeccccccccCCCccEEEEcCCccch
Q 019238 161 PQILVPIANG---SEEMEAVIIIDILRRAKANVVVAS--VADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGA 235 (344)
Q Consensus 161 ~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s--~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~ 235 (344)
++|++++.+- |...-+..+.+.+++.|+++.+.. .... . .. . ...++.......|.||+.+...
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~~~~~-~-~~------~-~~~~~~~~~~~vdgiIi~~~~~-- 70 (288)
T 1gud_A 2 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGD-F-QS------Q-LQLFEDLSNKNYKGIAFAPLSS-- 70 (288)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCCEEEEECSSTTC-H-HH------H-HHHHHHHHTSSEEEEEECCSSS--
T ss_pred cEEEEEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCCCCCCC-H-HH------H-HHHHHHHHHcCCCEEEEeCCCh--
Confidence 5788888652 233333456667778899988776 3221 1 00 0 0112333335789999865421
Q ss_pred HhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 236 QAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 236 ~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
. .+.+.+++..+.+.|+..+..
T Consensus 71 ~------~~~~~~~~~~~~~iPvV~~~~ 92 (288)
T 1gud_A 71 V------NLVMPVARAWKKGIYLVNLDE 92 (288)
T ss_dssp S------TTHHHHHHHHHTTCEEEEESS
T ss_pred H------HHHHHHHHHHHCCCeEEEECC
Confidence 1 111234444456778777754
No 252
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=20.80 E-value=1.9e+02 Score=24.18 Aligned_cols=38 Identities=18% Similarity=-0.107 Sum_probs=24.6
Q ss_pred CCCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeC
Q 019238 159 NSPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVA 196 (344)
Q Consensus 159 ~~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~ 196 (344)
++.+|++++.+- |...-+.++.+.+++.|+++.+....
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 47 (290)
T 2rgy_A 7 QLGIIGLFVPTFFGSYYGTILKQTDLELRAVHRHVVVATGC 47 (290)
T ss_dssp -CCEEEEECSCSCSHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCCeEEEEeCCCCCchHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899998652 23333446667778889998766543
No 253
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=20.76 E-value=3.5e+02 Score=22.14 Aligned_cols=40 Identities=18% Similarity=-0.066 Sum_probs=27.7
Q ss_pred CCCCeEEEEeCC---CcchhHHHHHHHHHHhcCCeEEEEEeCC
Q 019238 158 DNSPQILVPIAN---GSEEMEAVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 158 ~~~~~v~ill~~---g~~~~e~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
.++++|++++.+ .|...-+..+.+.+.+.|+++.+.....
T Consensus 6 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 48 (277)
T 3cs3_A 6 RQTNIIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGKK 48 (277)
T ss_dssp CCCCEEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEEESTT
T ss_pred cCCcEEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 356789999865 3444445567777888899988766543
No 254
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=20.70 E-value=2.9e+02 Score=25.96 Aligned_cols=107 Identities=14% Similarity=0.174 Sum_probs=66.0
Q ss_pred CCeEEEEeCCCcchhHHHHHHHHHHhcCCeEEEEEeCCCceee----------eccceeeeeccccccccCCCccEEEE-
Q 019238 160 SPQILVPIANGSEEMEAVIIIDILRRAKANVVVASVADKLEIL----------ASCQVKLVADMLIDEAAKLSYDLIVL- 228 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~----------~~~g~~v~~~~~~~~~~~~~~D~lii- 228 (344)
.++|.|++-+|-+--+-......|...|++++++-... +.. ...|..+..+ .++. ...++|+||=
T Consensus 52 ~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~--~~~~~~~~~~~~~~~~g~~~~~~-~~~~-~~~~~dliVDa 127 (502)
T 3rss_A 52 DYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGK--KKTPDCEYNYGLYKKFGGKVVEQ-FEPS-ILNEFDVVVDA 127 (502)
T ss_dssp TCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCS--SCCHHHHHHHHHHHHTTCCEESC-CCGG-GGGGCSEEEEE
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECC--CCCHHHHHHHHHHHhCCCceecc-cccc-cCCCCCEEEEe
Confidence 47999999999999999999999999999998887654 211 1123333311 1111 1245665442
Q ss_pred -cC-CccchHhhhcCHHHHHHHHHHHhcCCcEEEEcchhhhhhhhcCCC
Q 019238 229 -PG-GLGGAQAFAKSKKLVNMLKKQKESNRPYGAICASPALVLEPHGLL 275 (344)
Q Consensus 229 -pG-G~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~G~~~lLa~aGlL 275 (344)
-| |.. . .-.+.+.++|+...+.+++|.|+.-=+-+ -+..|-.
T Consensus 128 lfG~Gl~--~--~l~~~~~~~i~~iN~~~~~vvAvDiPSGl-~~dtG~~ 171 (502)
T 3rss_A 128 IFGTGLR--G--EITGEYAEIINLVNKSGKVVVSVDVPSGI-DSNTGKV 171 (502)
T ss_dssp SCSTTCC--S--CCCHHHHHHHHHHHTTCCEEEEESSCTTB-CTTTCCB
T ss_pred CccCCCC--C--CCcHHHHHHHHHHHcCCCCEEEecCCCCc-cCCCCCc
Confidence 12 211 1 12456677777777788999999843322 5555533
No 255
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=20.62 E-value=1.3e+02 Score=23.40 Aligned_cols=38 Identities=18% Similarity=0.375 Sum_probs=29.8
Q ss_pred CCeEEEEeCCCcchhH--HHHHHHHHHhcCCeEEEEEeCC
Q 019238 160 SPQILVPIANGSEEME--AVIIIDILRRAKANVVVASVAD 197 (344)
Q Consensus 160 ~~~v~ill~~g~~~~e--~~~~~~~l~~~~~~v~~~s~~~ 197 (344)
.+++.|++.||....+ +....+.++..|+++..++...
T Consensus 122 ~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~ 161 (178)
T 2xgg_A 122 VPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGH 161 (178)
T ss_dssp SCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC-
T ss_pred CCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCC
Confidence 4789999999986555 6777888888898888877744
No 256
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=20.52 E-value=1.3e+02 Score=25.31 Aligned_cols=89 Identities=9% Similarity=-0.040 Sum_probs=47.5
Q ss_pred CCeEEEEeCCC---cchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCCccchH
Q 019238 160 SPQILVPIANG---SEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGGLGGAQ 236 (344)
Q Consensus 160 ~~~v~ill~~g---~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG~~~~~ 236 (344)
+++|++++.+. |...-+.++.+.+++.|+++.++......+ .. ....++......+|.||+.+.. .
T Consensus 4 ~~~Ig~i~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~-------~~~~~~~l~~~~vdgiii~~~~--~- 72 (303)
T 3d02_A 4 EKTVVNISKVDGMPWFNRMGEGVVQAGKEFNLNASQVGPSSTDA-PQ-------QVKIIEDLIARKVDAITIVPND--A- 72 (303)
T ss_dssp CEEEEEECSCSSCHHHHHHHHHHHHHHHHTTEEEEEECCSSSCH-HH-------HHHHHHHHHHTTCSEEEECCSC--H-
T ss_pred ceEEEEEeccCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCCH-HH-------HHHHHHHHHHcCCCEEEEecCC--h-
Confidence 47899888652 223334456667777888876544322101 00 0011222223568999886642 1
Q ss_pred hhhcCHHHHHHHHHHHhcCCcEEEEcch
Q 019238 237 AFAKSKKLVNMLKKQKESNRPYGAICAS 264 (344)
Q Consensus 237 ~l~~~~~l~~~l~~~~~~~k~I~aic~G 264 (344)
......++...+.+.++..+...
T Consensus 73 -----~~~~~~~~~~~~~~ipvV~~~~~ 95 (303)
T 3d02_A 73 -----NVLEPVFKKARDAGIVVLTNESP 95 (303)
T ss_dssp -----HHHHHHHHHHHHTTCEEEEESCT
T ss_pred -----HHHHHHHHHHHHCCCeEEEEecC
Confidence 12234455556677888777643
No 257
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=20.44 E-value=1e+02 Score=25.35 Aligned_cols=57 Identities=16% Similarity=0.223 Sum_probs=40.7
Q ss_pred CCeEEEEeCC-CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEE
Q 019238 160 SPQILVPIAN-GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVL 228 (344)
Q Consensus 160 ~~~v~ill~~-g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~lii 228 (344)
..||.+...+ ...+.-...+...|+..||++.....+- .++.-.+.+...++|+|.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~v------------p~e~iv~~~~~~~~d~v~l 149 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDV------------LNENVVEEAAKHKGEKVLL 149 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSC------------CHHHHHHHHHHTTTSCEEE
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCC------------CHHHHHHHHHHcCCCEEEE
Confidence 4677776665 5578888899999999999987665532 2333334444567899999
No 258
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=20.29 E-value=1.9e+02 Score=25.95 Aligned_cols=85 Identities=11% Similarity=0.064 Sum_probs=44.7
Q ss_pred eeecCCCCeEEEEeCC--CcchhHHHHHHHHHHhcCCeEEEEEeCCCceeeeccceeeeeccccccccCCCccEEEEcCC
Q 019238 154 QWTFDNSPQILVPIAN--GSEEMEAVIIIDILRRAKANVVVASVADKLEILASCQVKLVADMLIDEAAKLSYDLIVLPGG 231 (344)
Q Consensus 154 ~~~~~~~~~v~ill~~--g~~~~e~~~~~~~l~~~~~~v~~~s~~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~liipGG 231 (344)
+-+..++++|++++.. .|...=+.++.+.+.+.|+++.+...... ...++.......|.||+..
T Consensus 19 ~~~~~~s~~Igvv~~~~~~f~~~l~~gi~~~a~~~g~~~~i~~~~~~-------------~~~i~~l~~~~vDGiIi~~- 84 (412)
T 4fe7_A 19 SHMFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDF-------------RARIDKIKDWLGDGVIADF- 84 (412)
T ss_dssp --CCCCCEEEEEECCTTSHHHHHHHHHHHHHHHHHTCCEEEEECC-C-------------C--------CCCSEEEEET-
T ss_pred CcCCCCCceEEEEeCCcchhhHHHHHHHHHHHHhcCCCeEEEecCCc-------------cchhhhHhcCCCCEEEEec-
Confidence 3334567899999841 12222234566667777999887764331 0113333335789999821
Q ss_pred ccchHhhhcCHHHHHHHHHHHhcCCcEEEEcc
Q 019238 232 LGGAQAFAKSKKLVNMLKKQKESNRPYGAICA 263 (344)
Q Consensus 232 ~~~~~~l~~~~~l~~~l~~~~~~~k~I~aic~ 263 (344)
.++. .++...+.+.|+..+..
T Consensus 85 --------~~~~---~~~~l~~~~iPvV~i~~ 105 (412)
T 4fe7_A 85 --------DDKQ---IEQALADVDVPIVGVGG 105 (412)
T ss_dssp --------TCHH---HHHHHTTCCSCEEEEEE
T ss_pred --------CChH---HHHHHhhCCCCEEEecC
Confidence 1222 33444556888887764
Done!