BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019240
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2 OS=Oryza sativa subsp.
japonica GN=ACLA-2 PE=2 SV=2
Length = 423
Score = 612 bits (1578), Expect = e-174, Method: Compositional matrix adjust.
Identities = 294/322 (91%), Positives = 307/322 (95%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRLLKEHLKRLAG+DLQI SAQVT+STDF+EL N++PWLS+ +LVVKPD
Sbjct: 1 MARKKIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVALNLD+AQV EFVK RLG EVEMGGCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALNLDIAQVKEFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVS+RLG TISFSECGGIEIEENWDKVKTIFLPTEK MT DACAPLIATLPLE RGKIGD
Sbjct: 121 IVSERLGSTISFSECGGIEIEENWDKVKTIFLPTEKPMTPDACAPLIATLPLEARGKIGD 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFKNFKKW NIEFPLPFG
Sbjct: 181 FIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RVLSSTE FIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVID 322
YAEYSGAPNEEEVLQYARVV+D
Sbjct: 301 YAEYSGAPNEEEVLQYARVVLD 322
>sp|O80526|ACLA3_ARATH ATP-citrate synthase alpha chain protein 3 OS=Arabidopsis thaliana
GN=ACLA-3 PE=2 SV=1
Length = 424
Score = 605 bits (1561), Expect = e-172, Method: Compositional matrix adjust.
Identities = 291/322 (90%), Positives = 306/322 (95%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRLLKEHLKRLA +DLQI SAQVTESTDF+ELTN+E WLSS++LVVKPD
Sbjct: 1 MARKKIREYDSKRLLKEHLKRLANIDLQIRSAQVTESTDFTELTNQESWLSSTKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVAL LDLA+VA+FVK RLGTEVEM GCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALKLDLAEVADFVKARLGTEVEMEGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVSDRLGCTISFSECGGIEIEENWDKVKTIFLP EK MTL+ CAPLIATLPLE R KIG+
Sbjct: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPAEKSMTLEVCAPLIATLPLEVRAKIGN 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FIMG FAVFQDLDFSF+EMNPFTLV+GEP+PLDMRGELDDTAAFKNF KW +IEFPLPFG
Sbjct: 181 FIMGAFAVFQDLDFSFMEMNPFTLVDGEPFPLDMRGELDDTAAFKNFNKWGDIEFPLPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RVLSSTE+FIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSSTENFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVID 322
YAEYSGAPNEEEVLQYARVVID
Sbjct: 301 YAEYSGAPNEEEVLQYARVVID 322
>sp|Q2QNG7|ACLA3_ORYSJ ATP-citrate synthase alpha chain protein 3 OS=Oryza sativa subsp.
japonica GN=ACLA-3 PE=2 SV=1
Length = 423
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/322 (89%), Positives = 304/322 (94%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRLL+EHLKRLA +DL I SAQVTESTDF+EL N+EPWLSS +LVVKPD
Sbjct: 1 MARKKIREYDSKRLLREHLKRLAAIDLHILSAQVTESTDFTELVNQEPWLSSMKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVALNLDLAQV +FVK RLG EVEMGGCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALNLDLAQVRQFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVS+RLG TISFSECGGIEIEENWDKVKT+FLPTEK MT DACAPLIATLPLE R KIGD
Sbjct: 121 IVSERLGSTISFSECGGIEIEENWDKVKTVFLPTEKAMTPDACAPLIATLPLEVRTKIGD 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FI GV++VFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFKNFKKW NI+FPLPFG
Sbjct: 181 FIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGELDDTAAFKNFKKWGNIQFPLPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RVLS +ESFIH LDEKTS+SLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVID 322
YAEYSGAPNEEEVLQYARVV+D
Sbjct: 301 YAEYSGAPNEEEVLQYARVVLD 322
>sp|Q9SGY2|ACLA1_ARATH ATP-citrate synthase alpha chain protein 1 OS=Arabidopsis thaliana
GN=ACLA-1 PE=1 SV=1
Length = 423
Score = 556 bits (1432), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/322 (81%), Positives = 289/322 (89%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRL+KEH KRL+G +L I S Q+ E+TD +EL KEPWLSS +LVVKPD
Sbjct: 1 MARKKIREYDSKRLVKEHFKRLSGKELPIRSVQINETTDLNELVEKEPWLSSEKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVAL LD A VA FVK RLG EVEM GCKGPITTFIVEPFVPHN+EYYL+
Sbjct: 61 MLFGKRGKSGLVALKLDFADVATFVKERLGKEVEMSGCKGPITTFIVEPFVPHNEEYYLN 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
+VSDRLGC+ISFSECGGIEIEENWDKVKTIFLPT +T + CAPL+ATLPLE + +I +
Sbjct: 121 VVSDRLGCSISFSECGGIEIEENWDKVKTIFLPTGASLTPEICAPLVATLPLEIKAEIEE 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FI +F +FQDLDF+F+EMNPFTLV+G PYPLDMRGELDDTAAFKNFKKW +IEFPLPFG
Sbjct: 181 FIKVIFTLFQDLDFTFLEMNPFTLVDGSPYPLDMRGELDDTAAFKNFKKWGDIEFPLPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RV+S TESFIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVID 322
YAEYSGAP E+EVLQYARVVID
Sbjct: 301 YAEYSGAPKEDEVLQYARVVID 322
>sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2 OS=Arabidopsis thaliana
GN=ACLA-2 PE=2 SV=1
Length = 423
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/322 (80%), Positives = 291/322 (90%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRL+KEH KRL+G +L I S Q+ + TD +EL +EPWLSS +LVVKPD
Sbjct: 1 MARKKIREYDSKRLVKEHFKRLSGQELPIRSVQINQETDLNELVEREPWLSSEKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVALNLD A VA FVK RLG EVEM GCKGPITTFIVEPFVPHN+E+YL+
Sbjct: 61 MLFGKRGKSGLVALNLDFADVATFVKERLGKEVEMSGCKGPITTFIVEPFVPHNEEFYLN 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVSDRLGC+ISFSECGGI+IEENWDKVKTI +PT +T + CAPL+ATLPLE +G++ D
Sbjct: 121 IVSDRLGCSISFSECGGIDIEENWDKVKTITIPTGASLTFEICAPLVATLPLEIKGELED 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG 240
FI +F +F+DLDF+F+EMNPFTLV+G+PYPLDMRGELDDTAAFKNFKKW +IEFP+PFG
Sbjct: 181 FIQVIFTLFEDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGDIEFPMPFG 240
Query: 241 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
RV+SSTESFIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
Query: 301 YAEYSGAPNEEEVLQYARVVID 322
YAEYSGAP E+EVLQYARVVID
Sbjct: 301 YAEYSGAPKEDEVLQYARVVID 322
>sp|Q53JY8|ACLA1_ORYSJ ATP-citrate synthase subunit alpha chain protein 1 OS=Oryza sativa
subsp. japonica GN=ACLA-1 PE=3 SV=2
Length = 407
Score = 551 bits (1420), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/323 (84%), Positives = 286/323 (88%), Gaps = 18/323 (5%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
MARKKIREYDSKRLLKEHLKRLAG+DLQI SAQVT+STDF+EL N++PWLS+ +LVVKPD
Sbjct: 1 MARKKIREYDSKRLLKEHLKRLAGIDLQILSAQVTQSTDFTELVNQQPWLSTMKLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLS 120
MLFGKRGKSGLVALNLD+AQV EFVK RLG EVEMGGCK PITTFIVEPFVPH+QEYYLS
Sbjct: 61 MLFGKRGKSGLVALNLDIAQVKEFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
Query: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRGKIGD 180
IVS+RLG TISFSECGGIEIEENWDKVKTIFL TEK MT DACAPLIATLPLE RGKIGD
Sbjct: 121 IVSERLGSTISFSECGGIEIEENWDKVKTIFLSTEKPMTPDACAPLIATLPLEARGKIGD 180
Query: 181 FIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFK-KWANIEFPLPF 239
FI GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFK + KW NIEFPLPF
Sbjct: 181 FIKGVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKTSRSKWGNIEFPLPF 240
Query: 240 GRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELG 299
GRVLSSTE FIH LDEKTSASLKFTVLNPKGRIWTMVAGG EL
Sbjct: 241 GRVLSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGG-----------------ELE 283
Query: 300 NYAEYSGAPNEEEVLQYARVVID 322
NYAEYSGAPNEEEVLQYARVV+D
Sbjct: 284 NYAEYSGAPNEEEVLQYARVVLD 306
>sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1
Length = 1091
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 200/326 (61%), Gaps = 3/326 (0%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL +++ + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWAHLLQDHPWLLSQSLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYY 118
L +RGK GLV +NL L V ++K RLG E +G KG + F++EPFVPH+Q E+Y
Sbjct: 61 QLIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPT-EKHMTLDACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + EK T D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNTEDIKRHLLVHAPEDKKEV 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDV 323
L NY EYSGAP+E++ YA+ ++ +
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSL 326
>sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1
Length = 1100
Score = 260 bits (665), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 200/326 (61%), Gaps = 3/326 (0%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL +++ + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWAHLLQDHPWLLSQSLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYY 118
L +RGK GLV +NL L V ++K RLG E +G KG + F++EPFVPH+Q E+Y
Sbjct: 61 QLIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + ++ + D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDTKAQKLLVGVDEKLNAEDIKRHLLVHAPEDKKEI 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDV 323
L NY EYSGAP+E++ YA+ ++ +
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSL 326
>sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1
Length = 1101
Score = 257 bits (657), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 198/326 (60%), Gaps = 3/326 (0%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL +++ + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQSLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQE--YY 118
L +RGK GLV +NL L V ++K RLG E +G G + F++EPFVPH QE +Y
Sbjct: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + ++ + D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVAVDEKLNPEDIKKHLLVHAPEDKKEI 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDV 323
L NY EYSGAP+E++ YA+ ++ +
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSL 326
>sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1
Length = 1091
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 198/326 (60%), Gaps = 3/326 (0%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL +++ + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQSLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQE--YY 118
L +RGK GL+ +NL L V ++K RLG E +G G + F++EPFVPH QE +Y
Sbjct: 61 QLIKRRGKLGLIGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + ++ + D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDV 323
L NY EYSGAP+E++ YA+ ++ +
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSL 326
>sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3
Length = 1101
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 198/326 (60%), Gaps = 3/326 (0%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPD 60
M+ K I E K LL + + + + + A+VT TD++ L PWL S LVVKPD
Sbjct: 1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPD 60
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYY 118
L +RGK GLV +NL L V ++K RLG E +G G + F++EPFVPH+Q E+Y
Sbjct: 61 QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFY 120
Query: 119 LSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTL-DACAPLIATLPLEFRGK 177
+ I + R G + F GG+++ + K + + + ++ + D L+ P + +
Sbjct: 121 VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI 180
Query: 178 IGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPL 237
+ FI G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP
Sbjct: 181 LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP 240
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +E
Sbjct: 241 PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE 300
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDV 323
L NY EYSGAP+E++ YA+ ++ +
Sbjct: 301 LANYGEYSGAPSEQQTYDYAKTILSL 326
>sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1
PE=2 SV=1
Length = 1106
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 201/341 (58%), Gaps = 22/341 (6%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLS-SSRLVVKP 59
M+ K + E K +L ++ + +GL + V +F E+ NK WL+ ++ V+KP
Sbjct: 1 MSAKAVSELSGKEVLYKYFEP-SGLLSAPHAFHVKAGENFDEIANKYEWLARDNKGVIKP 59
Query: 60 DMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EY 117
D L +RGK GLV + A F K + V +G +G + TFIVEPF H + E
Sbjct: 60 DQLIKRRGKLGLVKIGTPQELKAWFEKTG-DSYVRVGQTEGRLHTFIVEPFCAHTEKDEM 118
Query: 118 YLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPL---IATL--PL 172
Y++I S+R I F E GG++I + +K +T+ +P + + +A P + TL PL
Sbjct: 119 YIAIYSERFRDVIMFYEQGGVDIGDVEEKARTVSVPVQ--LNENAMTPSDEELTTLLGPL 176
Query: 173 EFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWA- 231
+ + F++ ++ ++DL F+++E+NPF L+N + + LD+ LD+TA F KW
Sbjct: 177 KDSDIVRRFVVELYKAYKDLHFTYLEINPFVLLNNQIHVLDLAARLDETANFLCADKWKS 236
Query: 232 ---------NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
++EFP PFGR L+S E +I +D KT ASLK T+LN KGR+WTMVAGGGAS
Sbjct: 237 RLTPYGGPNHVEFPAPFGRDLTSEEQYISEMDAKTGASLKLTILNRKGRVWTMVAGGGAS 296
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDV 323
V++ DTV DLG ASEL NY EYSG P+E + +YA+ ++ V
Sbjct: 297 VVFTDTVCDLGGASELANYGEYSGDPSESQTYEYAKTLLSV 337
>sp|O13907|ACL2_SCHPO Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC22A12.16 PE=1
SV=1
Length = 492
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 203/386 (52%), Gaps = 63/386 (16%)
Query: 1 MARKKIREYDSKRLLKEHLKRLAGLD------------LQICSAQV--------TESTDF 40
M+ K IREYD K +L L R + +Q+ Q EST +
Sbjct: 1 MSAKSIREYDGKAVLAYWLNRSPSISKEEYKTVSATPAVQLAQIQFPLPTLVIPAESTTY 60
Query: 41 SELT--------NKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTE 92
E+ + PW+ ++LV KPD L +RGKSGL+ LN + E+++ R G
Sbjct: 61 REVVEDVFAKVEQEHPWVKETKLVAKPDQLIKRRGKSGLLKLNATWDEAKEWIRERAGKN 120
Query: 93 VEMGGCKGPITTFIVEPFVPH--NQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTI 150
++ G +TTF+VEPFVPH N EYY++I S R G I F GG+++ + K + +
Sbjct: 121 QKVQHAVGYLTTFLVEPFVPHPPNTEYYININSVREGDWILFCNEGGVDVGDVDAKARKL 180
Query: 151 FLP---TEKHMTLDACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-- 205
+P +E + L++ +P+E + DFI+ +++V+ D F+++E+NP ++
Sbjct: 181 LVPVRLSEFPSRATIASTLLSDIPVEQHESLVDFIIRLYSVYVDCQFTYLEINPLVVIPT 240
Query: 206 --NGEPYPLDMRGELDDTAAFKNFKKWA--------------------------NIEFPL 237
+ + LD+ +LD TA F+ KWA + FP
Sbjct: 241 AKGADVFYLDLAAKLDQTAEFECGAKWAVARAPESLGIKTSGEESGAINADHGPPMVFPA 300
Query: 238 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 297
PFGR LS E+++ LD KT ASLK T+LN +GR+W +VAGGGASV+YAD V G A E
Sbjct: 301 PFGRELSKEEAYVQGLDAKTGASLKLTILNAEGRVWNLVAGGGASVVYADAVAVNGAADE 360
Query: 298 LGNYAEYSGAPNEEEVLQYARVVIDV 323
L NY EYSGAP + + +YA+ V+D+
Sbjct: 361 LANYGEYSGAPTDGQTYEYAKTVLDL 386
>sp|Q57663|SUCC_METJA Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=sucC PE=3
SV=1
Length = 364
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 145/311 (46%), Gaps = 58/311 (18%)
Query: 5 KIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSS----SRLVVKPD 60
K+ EY++K + K++ V ES L +KE L+S +V+K
Sbjct: 2 KLHEYEAKNIFKKY------------GIPVPESF----LVSKEDDLNSINVDKEVVLKAQ 45
Query: 61 MLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKG-PITTFIVEPFVPHNQEYYL 119
+L G RGK+G + L + EF+K E+ KG + +VE +P +EYY+
Sbjct: 46 VLVGGRGKAGGI---LFASNKEEFIKK--AEELFNKEVKGEKVEKILVEEKLPIEKEYYV 100
Query: 120 SIVSDRLGCT--ISFSECGGIEIEENWDK-----------VKTIFLPTEKHMTLDACAPL 166
SI+ DR I FS GG++IEE +K V+ FLP +
Sbjct: 101 SIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFLPYIARWIVKE---- 156
Query: 167 IATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK 225
A LP GK+ D I ++ +F++LD + +E+NP + +G Y D LDD AAF+
Sbjct: 157 -AKLPSNEIGKVADVIYKLYKIFKELDATMVEINPLVITKDGNVYAADAVLHLDDDAAFR 215
Query: 226 N----FKKWANIEFPLPFGRV-LSSTESFIHSLDEKTSASLKFTVLNPKGR--IWTMVAG 278
+ F+++ N E LPF V L + I + T AS+ ++N GR + G
Sbjct: 216 HNYEEFEEYKNKE-KLPFAYVELDGDVAVIGNGAGLTLASM--DIINNLGRKPACFLDIG 272
Query: 279 GGASVIYADTV 289
GGA A+TV
Sbjct: 273 GGAD---AETV 280
>sp|O67546|SUCC_AQUAE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aquifex aeolicus
(strain VF5) GN=sucC PE=3 SV=1
Length = 385
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 39/283 (13%)
Query: 55 LVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKG--PITTFIVEPFVP 112
LVVK + G RGK+G V + D+ ++ + V+ LG ++ C P+ ++E
Sbjct: 43 LVVKAQIHCGGRGKAGGVKIVKDMDELEKAVESLLGKVLKTFQCPDGKPVNRVLIEKATN 102
Query: 113 HNQEYYLSIVSDRLGC--TISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATL 170
++EYYL+I DR I S GG+EIEE I + + ++ P + +
Sbjct: 103 IDKEYYLAITLDRSKSKPVIMASAAGGMEIEE-------IVKENPEAIIIETIDPELGLM 155
Query: 171 PLEFR----------GKIGDFIMGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELD 219
P + R + + ++ ++ DLD S +E+NP L G LD + ++D
Sbjct: 156 PYQARELAFKLNLPVKEFASIALKLYQIYSDLDASLVEINPLVLTKEGNLIALDAKLDID 215
Query: 220 DTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLD-EKTSASLKFTVLNPKGRIWTMVAG 278
D A F++ K +E E+ + L+ E L + LN G I MV G
Sbjct: 216 DNALFRH-KDLEEME-----------DETQLPQLEVEAKKYGLNYIKLN--GNIGCMVNG 261
Query: 279 GGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
G ++ D + G E N+ + G N E++ R+++
Sbjct: 262 AGLAMATMDIIKLAG--GEPANFLDVGGGANVEQIANAFRILM 302
>sp|A9KBQ4|SUCC_COXBN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=sucC PE=3 SV=1
Length = 390
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 57/339 (16%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV------EMGGCKGPITTFIVEPFVPHNQEYYL 119
RGK+G V L + ++ VK LGT + E G P+ +VE +E YL
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQ---PVNQILVEQTSDIARELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG- 176
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTVD---PAIGLQPFQCRQL 163
Query: 177 -------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTA 222
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 164 FFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSA 223
Query: 223 AFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
++ + + +T+ H E + + + G I MV G G +
Sbjct: 224 LYRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLA 270
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
+ D + G + N+ + G+ +E V + R+++
Sbjct: 271 MATMDLIKLSG--GDPANFLDVGGSATKERVTEAFRIIV 307
>sp|A9N8R8|SUCC_COXBR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=sucC PE=3 SV=1
Length = 390
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 57/339 (16%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV------EMGGCKGPITTFIVEPFVPHNQEYYL 119
RGK+G V L + ++ VK LGT + E G P+ +VE +E YL
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQ---PVNQILVEQTSDIARELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG- 176
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTID---PAIGLQPFQCRQL 163
Query: 177 -------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTA 222
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 164 FFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSA 223
Query: 223 AFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
++ + + +T+ H E + + + G I MV G G +
Sbjct: 224 LYRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLA 270
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
+ D + G + N+ + G+ +E V + ++++
Sbjct: 271 MATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV 307
>sp|Q65JP0|SUCC_BACLD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3
SV=1
Length = 386
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 139/330 (42%), Gaps = 40/330 (12%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K +L+++ + + +V + D E LSSS VVK + G
Sbjct: 3 IHEYQGKEVLRKY-------GVAVPEGKVAFTAD--EAVKAAEALSSSVYVVKAQIHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V + +V + + LG + + G I ++E +EYY+ +V
Sbjct: 54 RGKAGGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKRLLIEEGCDIKKEYYVGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDK-----VKTIFLPTEKHMTLDACAPLIA-TLPLEF 174
DR I SE GG EIEE +K VK + P + A A +P E
Sbjct: 114 LDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGLQSYQARKIAFAINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWA 231
G+ F+MG++ F + D S E+NP + +G+ LD + D A + K+ ++
Sbjct: 174 VGQAVKFMMGLYKAFTEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDILEYR 233
Query: 232 NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGD 291
+++ P E ++ + ++ G I MV G G ++ D +
Sbjct: 234 DLDEEDP---------------KEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKH 278
Query: 292 LGYASELGNYAEYSGAPNEEEVLQYARVVI 321
Y E N+ + G E+V + ++++
Sbjct: 279 --YGGEPANFLDVGGGATAEKVTEAFKIIL 306
>sp|P53592|SUCC_COXBU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=sucC PE=3 SV=2
Length = 390
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 57/339 (16%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV------EMGGCKGPITTFIVEPFVPHNQEYYL 119
RGK+G V L + ++ VK LGT + E G P+ +VE +E YL
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQ---PVNQILVEQTSDIARELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG- 176
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTID---PAIGLQPFQCRQL 163
Query: 177 -------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTA 222
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 164 FFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSA 223
Query: 223 AFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
++ + + +T+ H E + + + G I MV G G +
Sbjct: 224 LYRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLA 270
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
+ D + G + N+ + G+ +E V + ++++
Sbjct: 271 MATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV 307
>sp|A7Z4M9|SUCC_BACA2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
amyloliquefaciens (strain FZB42) GN=sucC PE=3 SV=1
Length = 385
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 138/330 (41%), Gaps = 40/330 (12%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K +L+++ + + +V + + E K LSSS VVK + G
Sbjct: 3 IHEYQGKEVLRKY-------GVSVPEGKVAFTAE--EAVEKAESLSSSVYVVKAQIHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V + +V E+ + LG + + G I ++E +EYY+ +V
Sbjct: 54 RGKAGGVKIAKTKDEVKEYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKV-----KTIFLPTEKHMTLDACAPLIA-TLPLEF 174
DR I SE GG EIEE +K K + P A A +P E
Sbjct: 114 LDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWA 231
GK F++G++ F + D S E+NP + +G LD + D A + K+ ++
Sbjct: 174 VGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIMEYR 233
Query: 232 NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGD 291
+++ P E ++ + ++ G I MV G G ++ D +
Sbjct: 234 DLDEEDP---------------KEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKH 278
Query: 292 LGYASELGNYAEYSGAPNEEEVLQYARVVI 321
Y E N+ + G E+V + ++++
Sbjct: 279 --YGGEPANFLDVGGGATAEKVTEAFKIIL 306
>sp|P80886|SUCC_BACSU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus subtilis
(strain 168) GN=sucC PE=1 SV=2
Length = 385
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 136/330 (41%), Gaps = 40/330 (12%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K +L+++ + + + + ES LSSS VVK + G
Sbjct: 3 IHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESA---------KSLSSSVYVVKAQIHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V + L +V + + LG + + G I ++E +EYY+ +V
Sbjct: 54 RGKAGGVKIAKSLDEVKAYAEELLGKTLVTHQTGPDGQVIKRLLIEEGCDIKKEYYIGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKV-----KTIFLPTEKHMTLDACAPLIA-TLPLEF 174
DR I SE GG EIEE +K K + P A A +P E
Sbjct: 114 LDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWA 231
GK F++G++ F + D S E+NP + +G LD + D A + K+ ++
Sbjct: 174 VGKAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQKDIMEYR 233
Query: 232 NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGD 291
+++ P E ++ + ++ G I MV G G ++ D +
Sbjct: 234 DLDEEDP---------------KEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKH 278
Query: 292 LGYASELGNYAEYSGAPNEEEVLQYARVVI 321
Y E N+ + G E+V + ++++
Sbjct: 279 --YGGEPANFLDVGGGATAEKVTEAFKIIL 306
>sp|Q6GHJ0|SUCC_STAAR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain MRSA252) GN=sucC PE=3 SV=1
Length = 388
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKITKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|B6J8N7|SUCC_COXB1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuK_Q154) GN=sucC PE=3 SV=1
Length = 390
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 144/338 (42%), Gaps = 57/338 (16%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV------EMGGCKGPITTFIVEPFVPHNQEYYL 119
RGK+G V L + ++ VK LGT + E G P+ +VE +E YL
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQ---PVNQILVEQTSDIARELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG- 176
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTVD---PAIGLQPFQCRQL 163
Query: 177 -------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTA 222
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 164 FFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSA 223
Query: 223 AFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
++ + + +T+ H E + + + G I MV G G +
Sbjct: 224 LYRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLA 270
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVV 320
+ D + G + N+ + G+ +E V + +++
Sbjct: 271 MATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKII 306
>sp|Q5WFP4|SUCC_BACSK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus clausii
(strain KSM-K16) GN=sucC PE=3 SV=1
Length = 386
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 141/330 (42%), Gaps = 40/330 (12%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K +L+ + + + + +V S D + KE L SS VVK + G
Sbjct: 3 IHEYQGKEILRSY-------GVAVPNGKVAFSVDEAVEAAKE--LGSSVSVVKAQIHAGG 53
Query: 66 RGKSG--LVALNLDLAQV-AEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G VA NLD + AE + G+ + G + ++E EYY+ +V
Sbjct: 54 RGKAGGVKVAKNLDEVRTYAEEILGKTLVTHQTGPAGKEVKRLLIEEGCDIKSEYYIGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKV-----KTIFLPTEKHMTLDAC-APLIATLPLEF 174
DR ++ SE GG EIEE +K K + P A +P E
Sbjct: 114 VDRATSSVVLMASEEGGTEIEEVAEKTPEKIFKEVIDPAVGLQGFQARRIAFNINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAF--KNFKKWA 231
G+ F+MG++ VF D D S E+NP T +G+ LD + D A + K+ +
Sbjct: 174 VGQAVKFMMGLYQVFVDKDASIAEINPLVTTGDGKVMALDAKFNFDSNALYRHKDILELR 233
Query: 232 NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGD 291
++E E + + E + L + L+ G I MV G G ++ D +
Sbjct: 234 DLE------------EEDVKEI-EASKHDLNYIALD--GNIGCMVNGAGLAMATMDIIKH 278
Query: 292 LGYASELGNYAEYSGAPNEEEVLQYARVVI 321
Y + N+ + G E+V + ++++
Sbjct: 279 --YNGDPANFLDVGGGATAEKVTEAFKLIL 306
>sp|P66872|SUCC_STAAW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain MW2) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|A8Z3S5|SUCC_STAAT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain USA300 / TCH1516) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|Q6G9W8|SUCC_STAAS Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain MSSA476) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|P99071|SUCC_STAAN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain N315) GN=sucC PE=1 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|P66871|SUCC_STAAM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=sucC PE=1 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|A6QGE5|SUCC_STAAE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain Newman) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|Q5HGI7|SUCC_STAAC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain COL) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|A5ISD0|SUCC_STAA9 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain JH9) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|Q2FZ37|SUCC_STAA8 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain NCTC 8325) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|Q2FHJ3|SUCC_STAA3 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain USA300) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|A6U164|SUCC_STAA2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain JH1) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|A7X1L8|SUCC_STAA1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain Mu3 / ATCC 700698) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLALDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|B4U901|SUCC_HYDS0 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hydrogenobaculum
sp. (strain Y04AAS1) GN=sucC PE=3 SV=1
Length = 382
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 146/338 (43%), Gaps = 60/338 (17%)
Query: 5 KIREYDSKRLLKEHLKRLAGLDLQ--ICSAQVTESTDFSELTNKEPWLSSSRLVVKPDML 62
K+ E+ SK LLK++ GL + + V E+ + ++ P LVVK +
Sbjct: 2 KLHEHQSKELLKKY-----GLPVPEGYAAFNVKEAKEAAQALGGYP------LVVKAQIH 50
Query: 63 FGKRGKSG---LVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYL 119
G RGK+G +V + +L +E + G++ V+ K ++ ++E P +E+YL
Sbjct: 51 CGARGKAGGVKIVKSDEELEAFSEAILGKILKTVQCPNGK-VVSRLLIEKATPIEKEFYL 109
Query: 120 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEK--HMTLDACAPLIATLPLEFR 175
SI DR I S+ GG+EIEE L EK + + P++ +P + R
Sbjct: 110 SITLDRSNSKILIMASKEGGMEIEE---------LSKEKPDAIIKEYVDPVLGIMPYQTR 160
Query: 176 ----------GKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 224
G + ++ + DLD S +E+NP L +G+ LD + E+DD AAF
Sbjct: 161 KLSFALGLNPSLFGKIVSKLYQAYMDLDASLLEINPLVLTKDGDIVLLDAKVEIDDNAAF 220
Query: 225 --KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
K+ ++ +I P E + + +G I MV G G +
Sbjct: 221 RHKDIEELEDITQIDPL---------------EVEAKKYGLNYIKLEGNIGCMVNGAGLA 265
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVV 320
+ D + G A N+ + G + E++ R++
Sbjct: 266 MTTMDIIKLAGGAP--ANFLDVGGGASVEQIANAFRIL 301
>sp|Q49X32|SUCC_STAS1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sucC PE=3 SV=1
Length = 388
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 125/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKELDSKVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRLG--CTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCDIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ AP A +P E K F++ ++ VF + D S +E+NP T G
Sbjct: 150 DPVV--GLAPYQARRIAFNINIPKESINKAAKFLVSLYNVFIEKDCSIVEINPLVTTGEG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
E LD + DD A F K+ ++ ++E P E + L +
Sbjct: 208 EVLALDAKVNFDDNALFKHKDIQELRDLEEEDP-------------KEIEASKYDLSYIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G +E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDVGGGATKEKVTEAFKIIL 306
>sp|Q5H2H4|SUCC_XANOR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
oryzae pv. oryzae (strain KACC10331 / KXO85) GN=sucC
PE=3 SV=1
Length = 389
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 145/337 (43%), Gaps = 56/337 (16%)
Query: 7 REYDSKRLLKEHLKRLAGLDLQICSAQVT----ESTDFSELTNKEPWLSSSRLVVKPDML 62
EY SK+LL E+ + + S +V E+ D + K PW+ VK +
Sbjct: 4 HEYQSKQLLAEY-------GIPVPSGKVAATPDEAVDVATSLGKGPWM------VKAQIH 50
Query: 63 FGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYL 119
G RGK+G V V LGT++ + G + PI +V +E YL
Sbjct: 51 AGGRGKAGGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEE------------NWDKVKTIFLPTEKHMTLDACAP 165
SI+ DR TI++ S GG+EIE+ N D V+ + + + D
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGV----QGYHGRDFGFK 166
Query: 166 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 224
L L + G+ ++ ++ +F + D + +E+NP ++ +G Y LD + + DD AAF
Sbjct: 167 L--GLNAKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAF 224
Query: 225 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVI 284
+ ++++ + E T++ L + G I MV G G ++
Sbjct: 225 RQ-------------KQLVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMA 271
Query: 285 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
D + G E N+ + G N++ V++ ++++
Sbjct: 272 TMDVIKLNG--GEPANFLDVGGGANKQRVIEAFKLIL 306
>sp|B2ST87|SUCC_XANOP Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
oryzae pv. oryzae (strain PXO99A) GN=sucC PE=3 SV=1
Length = 389
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 145/337 (43%), Gaps = 56/337 (16%)
Query: 7 REYDSKRLLKEHLKRLAGLDLQICSAQVT----ESTDFSELTNKEPWLSSSRLVVKPDML 62
EY SK+LL E+ + + S +V E+ D + K PW+ VK +
Sbjct: 4 HEYQSKQLLAEY-------GIPVPSGKVAATPDEAVDVATSLGKGPWM------VKAQIH 50
Query: 63 FGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYL 119
G RGK+G V V LGT++ + G + PI +V +E YL
Sbjct: 51 AGGRGKAGGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEE------------NWDKVKTIFLPTEKHMTLDACAP 165
SI+ DR TI++ S GG+EIE+ N D V+ + + + D
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGV----QGYHGRDFGFK 166
Query: 166 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 224
L L + G+ ++ ++ +F + D + +E+NP ++ +G Y LD + + DD AAF
Sbjct: 167 L--GLNAKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAF 224
Query: 225 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVI 284
+ ++++ + E T++ L + G I MV G G ++
Sbjct: 225 RQ-------------KQLVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMA 271
Query: 285 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
D + G E N+ + G N++ V++ ++++
Sbjct: 272 TMDVIKLNG--GEPANFLDVGGGANKQRVIEAFKLIL 306
>sp|Q2P5E6|SUCC_XANOM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
oryzae pv. oryzae (strain MAFF 311018) GN=sucC PE=3 SV=1
Length = 389
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 145/337 (43%), Gaps = 56/337 (16%)
Query: 7 REYDSKRLLKEHLKRLAGLDLQICSAQVT----ESTDFSELTNKEPWLSSSRLVVKPDML 62
EY SK+LL E+ + + S +V E+ D + K PW+ VK +
Sbjct: 4 HEYQSKQLLAEY-------GIPVPSGKVAATPDEAVDVATSLGKGPWM------VKAQIH 50
Query: 63 FGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYL 119
G RGK+G V V LGT++ + G + PI +V +E YL
Sbjct: 51 AGGRGKAGGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEE------------NWDKVKTIFLPTEKHMTLDACAP 165
SI+ DR TI++ S GG+EIE+ N D V+ + + + D
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGV----QGYHGRDFGFK 166
Query: 166 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 224
L L + G+ ++ ++ +F + D + +E+NP ++ +G Y LD + + DD AAF
Sbjct: 167 L--GLNAKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAF 224
Query: 225 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVI 284
+ ++++ + E T++ L + G I MV G G ++
Sbjct: 225 RQ-------------KQLVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMA 271
Query: 285 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
D + G E N+ + G N++ V++ ++++
Sbjct: 272 TMDVIKLNG--GEPANFLDVGGGANKQRVIEAFKLIL 306
>sp|B6IZ97|SUCC_COXB2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuG_Q212) GN=sucC PE=3 SV=1
Length = 390
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 144/339 (42%), Gaps = 57/339 (16%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY SK LLK++ ++ + +++V + D + + + R VVK + G
Sbjct: 3 LHEYQSKHLLKKY-------NIPVPASEVVFNPDAA--VDAAAKIGGDRWVVKAQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV------EMGGCKGPITTFIVEPFVPHNQEYYL 119
RGK+G V L + ++ VK LG + E G P+ +VE +E YL
Sbjct: 54 RGKAGGVRLVKNKEELKSAVKALLGMRLVTYQTDERGQ---PVNQILVEQTSDIARELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG- 176
V DR I F S GG+EIE+ +K L +T+D P I P + R
Sbjct: 111 GAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKIL----KVTVD---PAIGLQPFQCRQL 163
Query: 177 -------------KIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTA 222
D +MG++ +F + D S +E+NP + +GE LD + +DD+A
Sbjct: 164 FFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSA 223
Query: 223 AFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGAS 282
++ + + +T+ H E + + + G I MV G G +
Sbjct: 224 LYRQSE----------LREMRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLA 270
Query: 283 VIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
+ D + G + N+ + G+ +E V + ++++
Sbjct: 271 MATMDLIKLSG--GDPANFLDVGGSATKERVTEAFKIIV 307
>sp|Q9KA20|SUCC_BACHD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=sucC PE=3 SV=1
Length = 386
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 36/328 (10%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K LL+++ + + + +V S D + KE L S+ VVK + G
Sbjct: 3 IHEYQGKELLRQY-------GVAVPNGKVAFSVDEAVEAAKE--LGSNVCVVKAQIHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V + +L +V + LG + + G + ++E +EYY+ +V
Sbjct: 54 RGKAGGVKVAKNLDEVRTYADEILGKTLVTHQTGPEGKEVKRLLIEEGCDIQKEYYVGLV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKV-----KTIFLPTEKHMTLDACA-PLIATLPLEF 174
DR + SE GG EIEE +K K I P A +P E
Sbjct: 114 LDRATSRVVMMASEEGGTEIEEVAEKTPEKIFKEIIDPVVGLQGFQARRLAFNINIPKEL 173
Query: 175 RGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAFKNFKKWANI 233
G+ F++G++ VF + D S E+NP T +G+ LD + D A +++ A +
Sbjct: 174 VGQAVKFMLGLYKVFVEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNAL---YRQKAIL 230
Query: 234 EFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLG 293
EF R L + E ++ + ++ G I MV G G ++ D +
Sbjct: 231 EF-----RDLDEEDP-----KEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKH-- 278
Query: 294 YASELGNYAEYSGAPNEEEVLQYARVVI 321
Y E N+ + G E+V + ++++
Sbjct: 279 YNGEPANFLDVGGGATAEKVTEAFKIIL 306
>sp|Q2YXM1|SUCC_STAAB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=sucC PE=3 SV=1
Length = 388
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 126/296 (42%), Gaps = 35/296 (11%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K +S VVK + G RGK+G V + L++V + K LG + + G
Sbjct: 30 EAVEKAKEFNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYAKELLGKTLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKV-KTIFLPTE 155
I +E +EYY+ V DR T+ SE GG EIEE K + IF T
Sbjct: 90 GKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETI 149
Query: 156 KHMTLDACAPLIA-------TLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPF-TLVNG 207
+ +P A +P E K F++ ++ VF + D S +E+NP T +G
Sbjct: 150 DPVI--GLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADG 207
Query: 208 EPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV 265
+ LD + DD A F K+ + ++E P E+ H L +
Sbjct: 208 DVLVLDAKINFDDNALFRHKDVVELRDLEEEDP-----KEIEASKHDLS--------YIA 254
Query: 266 LNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
L+ G I MV G G ++ DT+ G N+ + G+ E+V + ++++
Sbjct: 255 LD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDAGGSATREKVTEAFKIIL 306
>sp|Q8P676|SUCC_XANCP Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=sucC PE=3 SV=1
Length = 389
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 146/337 (43%), Gaps = 56/337 (16%)
Query: 7 REYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFS-ELTN---KEPWLSSSRLVVKPDML 62
EY SK+LL E+ + + + +V + D + E+ N K PW+ VK +
Sbjct: 4 HEYQSKQLLAEY-------GIPVPAGKVASTPDEAVEVANSLGKGPWM------VKAQIH 50
Query: 63 FGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYL 119
G RGK+G V V LGT++ + G + P+ +V +E YL
Sbjct: 51 AGGRGKAGGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEE------------NWDKVKTIFLPTEKHMTLDACAP 165
SI+ DR TI++ S GG+EIE+ N D V+ + + + D
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGV----QGYHGRDFGFK 166
Query: 166 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 224
L L + G+ ++ ++ +F D D + +E+NP ++ +G Y LD + + DD AAF
Sbjct: 167 L--GLNAKQAGQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAF 224
Query: 225 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVI 284
+ +++ + E T++ L + G I MV G G ++
Sbjct: 225 RQKA-------------LVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMA 271
Query: 285 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
D + G E N+ + G N++ V++ ++++
Sbjct: 272 TMDVIKLNG--GEPANFLDVGGGANKQRVIEAFKLIL 306
>sp|Q4UXU0|SUCC_XANC8 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=sucC PE=3
SV=1
Length = 389
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 146/337 (43%), Gaps = 56/337 (16%)
Query: 7 REYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFS-ELTN---KEPWLSSSRLVVKPDML 62
EY SK+LL E+ + + + +V + D + E+ N K PW+ VK +
Sbjct: 4 HEYQSKQLLAEY-------GIPVPAGKVASTPDEAVEVANSLGKGPWM------VKAQIH 50
Query: 63 FGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYL 119
G RGK+G V V LGT++ + G + P+ +V +E YL
Sbjct: 51 AGGRGKAGGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYL 110
Query: 120 SIVSDRLGCTISF--SECGGIEIEE------------NWDKVKTIFLPTEKHMTLDACAP 165
SI+ DR TI++ S GG+EIE+ N D V+ + + + D
Sbjct: 111 SILVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGV----QGYHGRDFGFK 166
Query: 166 LIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF 224
L L + G+ ++ ++ +F D D + +E+NP ++ +G Y LD + + DD AAF
Sbjct: 167 L--GLNAKQAGQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAF 224
Query: 225 KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVI 284
+ +++ + E T++ L + G I MV G G ++
Sbjct: 225 RQKA-------------LVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMA 271
Query: 285 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
D + G E N+ + G N++ V++ ++++
Sbjct: 272 TMDVIKLNG--GEPANFLDVGGGANKQRVIEAFKLIL 306
>sp|C0ZFB3|SUCC_BREBN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brevibacillus
brevis (strain 47 / JCM 6285 / NBRC 100599) GN=sucC PE=3
SV=1
Length = 386
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 146/340 (42%), Gaps = 40/340 (11%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
I EY K +LK++ +++ +V + + + KE L + VVK + G
Sbjct: 3 IHEYQGKEILKQY-------GVKVPEGRVAFTVEEAVEAAKE--LGTQVNVVKAQIHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGP----ITTFIVEPFVPHNQEYYLSI 121
RGK+G V + +L +V + LG +V + GP + ++E +EYY+ +
Sbjct: 54 RGKAGGVKVAKNLDEVRTYASEILG-KVLVTHQTGPEGKEVKRLLIEQGCDIKKEYYVGV 112
Query: 122 VSDRLGCTISF--SECGGIEIEE----NWDKV-KTIFLPTEKHMTLDACAPLIA-TLPLE 173
V DR ++ SE GG++IEE N +K+ K + P A A +P E
Sbjct: 113 VVDRATGSVVMMASEEGGMDIEEVAANNPEKIFKEVVDPVTGLNGFQARRLAYAINIPKE 172
Query: 174 FRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWAN 232
K F+M ++ F D D S E+NP + +GE LD + D A +++
Sbjct: 173 LINKAAKFMMSLYQAFVDKDASIAEINPLVVTGDGEVMALDAKLNFDSNALYRH------ 226
Query: 233 IEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDL 292
P L + E + L + L+ G I MV G G ++ D V
Sbjct: 227 -----PDIVALRDLDEEDEKEIEASKFDLSYIALD--GNIGCMVNGAGLAMATMDIVK-- 277
Query: 293 GYASELGNYAEYSGAPNEEEVLQYARVVIDVRDFTNFGLF 332
Y + N+ + G EE+V + ++++ RD G+F
Sbjct: 278 FYGGDPANFLDVGGGATEEKVTEAFKIIL--RDEKVKGIF 315
>sp|Q5X7K6|SUCC_LEGPA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Paris) GN=sucC PE=3 SV=1
Length = 387
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 47/294 (15%)
Query: 50 LSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFI 106
LS+SR VVK + G RGK+G V L ++A K LGT + + P+ +
Sbjct: 38 LSTSRWVVKAQVHAGGRGKAGGVKLVSSKDELAAVAKSMLGTRLVTYQTDARGQPVNAIL 97
Query: 107 VEPFVPHNQEYYLSIVSDRLG--CTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACA 164
VE ++E YL V DR I S GG+EIE+ + T + +
Sbjct: 98 VEETCEIDKELYLGAVVDRATRRVVIMASTEGGVEIEK-------VAHETPEKIFKVVVD 150
Query: 165 PLIATLPLEFRG---KIG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPY 210
PL+ +P + R K+G +MG+ +F D D S +E+NP + +G+
Sbjct: 151 PLVGVMPFQCRETAFKLGLKDDQIKQFTHLMMGLGKMFVDCDLSLLEINPLVITKSGQLI 210
Query: 211 PLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS---LKFTVLN 267
LD + +D A F+ K L + D + AS L + L+
Sbjct: 211 CLDGKINIDGNALFRQPK--------------LKNMRDVSQEDDRENRASDWELNYIPLD 256
Query: 268 PKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
G I MV G G ++ D + + E N+ + G +E V + ++++
Sbjct: 257 --GTIGCMVNGAGLAMATMDVIKL--HGGEPANFLDVGGGATKERVSEALKIIV 306
>sp|A5UIW0|SUCC_HAEIG Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus
influenzae (strain PittGG) GN=sucC PE=3 SV=1
Length = 394
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 140/337 (41%), Gaps = 54/337 (16%)
Query: 6 IREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGK 65
+ EY +K+L + + L + + V +S D +L + LS + K + G
Sbjct: 3 LHEYQAKQLFEHY-------GLPVKNGAVCQSVDEVDLVLAQ--LSGDKWAAKCQVHAGG 53
Query: 66 RGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGCKGPITTFIVEPFVPHNQEYYLSIV 122
RGK+G V L D+ + F + LG + + P+ E ++E+YLS V
Sbjct: 54 RGKAGGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAV 113
Query: 123 SDRLGCTISF--SECGGIEIEENWDKVKTIFLPTEKHMTLDACAPLIATLPLEFRG---K 177
DR + F S GG++IEE + E PL LP + R K
Sbjct: 114 VDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVE-------IDPLFGGLPYQGRELAFK 166
Query: 178 IG----------DFIMGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKN 226
+G D MG+ +F + D S +E+NP L G LD + +DD A F++
Sbjct: 167 LGLSDAQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKIAVDDNALFRH 226
Query: 227 FKKWANIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTV--LNPKGRIWTMVAGGGASVI 284
+ LS+ + + D + + + KF + + +G I MV G G ++
Sbjct: 227 --------------KDLSALQDLTQN-DAREAEAEKFQLNYVALEGDIGCMVNGAGLAMG 271
Query: 285 YADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVI 321
D V Y + N+ + G +E V + ++++
Sbjct: 272 TMDIVK--LYGGKPANFLDVGGGATKERVAEAFKIIL 306
>sp|Q8CPH5|SUCC_STAES Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=sucC PE=3 SV=1
Length = 388
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 126/301 (41%), Gaps = 45/301 (14%)
Query: 42 ELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEV---EMGGC 98
E K L+S VVK + G RGK+G V + L++V + LG ++ + G
Sbjct: 30 EAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYANELLGKQLVTHQTGPE 89
Query: 99 KGPITTFIVEPFVPHNQEYYLSIVSDRL--GCTISFSECGGIEIEENWDKVKTIFLPTEK 156
+ +E +EYY+ V DR T+ SE GG EIEE + T +
Sbjct: 90 GKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEE-------VAAQTPE 142
Query: 157 HMTLDACAPLIATLPLEFR-------------GKIGDFIMGVFAVFQDLDFSFIEMNPF- 202
+ + P++ P + R GK F++ ++ VF + D S +E+NP
Sbjct: 143 KIFKETIDPVVGLSPYQARRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLV 202
Query: 203 TLVNGEPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGRVLSSTESFIHSLDEKTSAS 260
T +G+ LD + DD A F K+ + ++E P E +
Sbjct: 203 TTGDGQVLALDAKLNFDDNALFRHKDILELRDLEEEDP-------------KEIEASKYD 249
Query: 261 LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVV 320
L + L+ G I MV G G ++ DT+ G N+ + G +E+V + +++
Sbjct: 250 LSYIALD--GDIGCMVNGAGLAMATMDTINHFG--GNPANFLDVGGGATKEKVTEAFKII 305
Query: 321 I 321
+
Sbjct: 306 L 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,243,637
Number of Sequences: 539616
Number of extensions: 5531505
Number of successful extensions: 12124
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 437
Number of HSP's that attempted gapping in prelim test: 11711
Number of HSP's gapped (non-prelim): 464
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)