Query 019240
Match_columns 344
No_of_seqs 185 out of 1890
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 13:03:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019240.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019240hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2nu7b2 d.142.1.4 (B:1-238) Su 100.0 2.6E-50 1.9E-54 370.8 22.2 222 4-235 1-234 (238)
2 d1eucb2 d.142.1.4 (B:0-245) Su 100.0 6.5E-45 4.7E-49 335.8 20.6 223 4-236 2-243 (246)
3 d1eucb1 c.23.4.1 (B:246-393) S 100.0 1.7E-34 1.2E-38 244.6 9.1 81 255-337 4-85 (148)
4 d2nu7b1 c.23.4.1 (B:239-388) S 100.0 1.3E-33 9.2E-38 240.1 9.4 81 255-337 4-85 (150)
5 d1vkza3 d.142.1.2 (A:94-313) G 99.0 6.2E-10 4.5E-14 97.7 11.8 100 9-127 3-102 (220)
6 d1ulza3 d.142.1.2 (A:115-328) 99.0 3.6E-09 2.6E-13 92.7 14.4 108 9-133 2-110 (214)
7 d2j9ga3 d.142.1.2 (A:115-330) 99.0 2.8E-09 2.1E-13 93.9 13.2 177 9-220 3-181 (216)
8 d1gsoa3 d.142.1.2 (A:104-327) 99.0 9.3E-10 6.7E-14 98.1 9.8 99 10-127 4-102 (224)
9 d1a9xa5 d.142.1.2 (A:128-402) 98.8 4.9E-08 3.5E-12 89.0 15.1 101 10-132 4-104 (275)
10 d1iowa2 d.142.1.1 (A:97-306) D 98.7 1.4E-07 1E-11 81.3 14.7 166 9-214 2-175 (210)
11 d1ehia2 d.142.1.1 (A:135-362) 98.6 8E-07 5.9E-11 77.3 17.9 169 9-214 3-183 (228)
12 d1a9xa6 d.142.1.2 (A:677-935) 98.6 4.7E-07 3.4E-11 82.0 16.2 93 12-126 3-95 (259)
13 d2r7ka2 d.142.1.9 (A:124-361) 98.5 3E-07 2.2E-11 81.3 11.8 91 10-127 4-94 (238)
14 d2r85a2 d.142.1.9 (A:100-334) 98.5 1.6E-07 1.2E-11 82.5 8.6 89 10-127 4-92 (235)
15 d1w96a3 d.142.1.2 (A:184-450) 98.4 1.3E-06 9.2E-11 78.9 14.1 81 39-132 51-131 (267)
16 d2csua3 c.23.4.1 (A:291-453) A 98.2 1.2E-06 8.9E-11 73.1 7.4 61 271-333 5-86 (163)
17 d1kjqa3 d.142.1.2 (A:113-318) 98.0 7.2E-06 5.2E-10 69.5 8.8 90 24-128 14-103 (206)
18 d1e4ea2 d.142.1.1 (A:132-342) 97.9 1.8E-05 1.3E-09 67.6 9.8 94 8-128 2-95 (211)
19 d3etja3 d.142.1.2 (A:79-276) N 97.9 1.2E-05 8.6E-10 67.6 6.9 96 9-131 3-98 (198)
20 d1uc8a2 d.142.1.7 (A:89-280) L 97.8 3.8E-06 2.7E-10 70.4 2.9 85 9-115 2-88 (192)
21 d1i7na2 d.142.1.3 (A:215-420) 96.2 0.0039 2.8E-07 52.8 6.9 62 46-122 45-106 (206)
22 d2csua2 c.23.4.1 (A:130-290) A 81.7 1.1 7.9E-05 36.0 5.7 61 269-332 20-80 (161)
23 d1gsaa2 d.142.1.1 (A:123-314) 64.3 2.3 0.00017 34.3 3.6 40 27-76 13-52 (192)
24 d1oi7a2 c.23.4.1 (A:122-288) S 54.4 7.2 0.00052 30.8 4.9 62 269-332 23-85 (167)
25 d1euca2 c.23.4.1 (A:131-306) S 37.3 22 0.0016 28.0 5.3 61 269-331 23-84 (176)
26 d2nu7a2 c.23.4.1 (A:122-287) S 33.4 24 0.0018 27.4 4.9 62 269-332 23-85 (166)
No 1
>d2nu7b2 d.142.1.4 (B:1-238) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.6e-50 Score=370.84 Aligned_cols=222 Identities=23% Similarity=0.324 Sum_probs=196.8
Q ss_pred CCCCHHHHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHH
Q 019240 4 KKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAE 83 (344)
Q Consensus 4 ~~L~Eyqak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~ 83 (344)
|+|+|||||+||++| ||||| ++.+++++ +||.+++++||++|||+|+|++++||||+|||+++.+++|+..
T Consensus 1 m~L~E~eaK~lL~~y-----GIpvp--~~~~a~s~--~ea~~~a~~iG~~pvVlKaq~~~~hk~~~GGV~~~~~~~e~~~ 71 (238)
T d2nu7b2 1 MNLHEYQAKQLFARY-----GLPAP--VGYACTTP--REAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRA 71 (238)
T ss_dssp CBCCHHHHHHHHHHT-----TCCCC--CEEEESSH--HHHHHHHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHHH
T ss_pred CchhHHHHHHHHHHc-----CCCCC--CceEECCH--HHHHHHHHHhCCCcEEEEEeecccccccceEEEeccccHHHHH
Confidence 799999999999999 99998 99998875 6999999999855999999999999999999999999999999
Q ss_pred HHHHHhcccchh--cCCCc-ceeeEEEEeecCCCceEEEEEEEcCC-Cce-EEeeccCcccccccc----cceeEEEcCC
Q 019240 84 FVKGRLGTEVEM--GGCKG-PITTFIVEPFVPHNQEYYLSIVSDRL-GCT-ISFSECGGIEIEENW----DKVKTIFLPT 154 (344)
Q Consensus 84 ~a~~~l~~~~~~--~g~~~-~v~~vLVee~~~~~~Elylgi~~Dr~-~p~-il~s~~GGv~iE~~~----d~~~~~~l~~ 154 (344)
++++++++.+.+ +.+.+ .+++++||+|+++++|+|+|+++||. +|+ ++.|+.||+++|++. ..+...++++
T Consensus 72 ~a~~~~~~~~~~~~~~~~g~~v~~vlve~~~~~~~E~~lg~~~D~~~g~~~l~~s~~GGv~ie~~~~~~~~~~~~~~~~~ 151 (238)
T d2nu7b2 72 FAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDP 151 (238)
T ss_dssp HHHHHTTSEECCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCTTSCHHHHHHHCGGGEEEEECCT
T ss_pred HHHHHhCcceeeeccccCCcccceeeecceeecccceEEEEEEeccCCceEEEEecccceeeEeeeccccccccccccCc
Confidence 999999988765 33334 68999999999999999999999999 665 455678999999864 4455568899
Q ss_pred cCCCCHHHHHHHHcC--CChHHHHHHHHHHHHHHHHhhccCcceeeeeeeee-cCCceEEEeeeeeeccchhhhcccccc
Q 019240 155 EKHMTLDACAPLIAT--LPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDMRGELDDTAAFKNFKKWA 231 (344)
Q Consensus 155 ~~~l~~~~a~~ll~g--~~~~~~~~l~~~l~~L~~lf~e~d~~~lEINPL~v-~~g~~~alDaki~iDd~A~fR~~~~~~ 231 (344)
..+++...+.+++.+ .+..+..++++++.++|++|.+.+++++|||||++ ++|+++|+|||+++||||.||||+ |.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lEINPLiv~~~G~vvAlDAki~lDdnA~fr~~~-~~ 230 (238)
T d2nu7b2 152 LTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPD-LR 230 (238)
T ss_dssp TTCCCHHHHHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEETTSCEEESCCEEEECGGGGGGCHH-HH
T ss_pred ccccchhhHHHHHHhcCCcchhhHHHHHHHHHhhHhhhcCCceEEeecceEECCCCCEEEEEeEEeecCcchhcChh-HH
Confidence 999999999888874 45688999999999999999999999999999999 888899999999999999999998 55
Q ss_pred cccC
Q 019240 232 NIEF 235 (344)
Q Consensus 232 ~~~~ 235 (344)
.+++
T Consensus 231 ~~~d 234 (238)
T d2nu7b2 231 EMRD 234 (238)
T ss_dssp HTCC
T ss_pred hhcC
Confidence 5543
No 2
>d1eucb2 d.142.1.4 (B:0-245) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=100.00 E-value=6.5e-45 Score=335.83 Aligned_cols=223 Identities=24% Similarity=0.357 Sum_probs=189.9
Q ss_pred CCCCHHHHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCc-------CeEEEeC
Q 019240 4 KKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKS-------GLVALNL 76 (344)
Q Consensus 4 ~~L~Eyqak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~-------GgV~l~~ 76 (344)
|+|+|||||++|++| |||+| ++.+++++ +||.+++++||.+|||+|+|+++|+|||. |||+++.
T Consensus 2 m~L~E~eaK~lL~~y-----GIpvp--~~~~a~s~--~ea~~~a~~ig~~~vVlK~qv~~g~r~~~~~~k~~~GgV~~~~ 72 (246)
T d1eucb2 2 VNLQEYQSKKLMSDN-----GVKVQ--RFFVADTA--NEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTK 72 (246)
T ss_dssp CCCCHHHHHHHHHTT-----TCCCC--CEEEESSH--HHHHHHHHHHTCSSEEEEECCSSSCCTTCEETTSCBCSEEEES
T ss_pred ccHhHHHHHHHHHHc-----CCCCC--CeeEECCH--HHHHHHHHHhCCCeEEEEEeeccccccccccccCCcceEEEec
Confidence 899999999999999 99998 99998875 69999999998679999999999998886 9999999
Q ss_pred CHHHHHHHHHHHhcccchh--cCCCc-ceeeEEEEeecCCCceEEEEEEEcCC-Cc-eEEeeccCcccccccccceeE--
Q 019240 77 DLAQVAEFVKGRLGTEVEM--GGCKG-PITTFIVEPFVPHNQEYYLSIVSDRL-GC-TISFSECGGIEIEENWDKVKT-- 149 (344)
Q Consensus 77 s~eea~~~a~~~l~~~~~~--~g~~~-~v~~vLVee~~~~~~Elylgi~~Dr~-~p-~il~s~~GGv~iE~~~d~~~~-- 149 (344)
|++|+++++++++.+...+ +++.+ .+.+++||++++++.|+|+|++.|+. ++ ++++|+.||+++|+.++....
T Consensus 73 ~~ee~~~~a~~~~~~~~~~~~~~~~~~~v~~vlve~~~~~~~E~~vg~~~D~~~g~~~l~~~~~GGv~ve~~~~~~~~~~ 152 (246)
T d1eucb2 73 DPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELI 152 (246)
T ss_dssp CHHHHHHHHHTTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEEGGGTEEEEEEESSCSSCHHHHHHHCGGGC
T ss_pred ChhHHHHHhhhhhcchhhhhhccccccccccceehhcccccceeeeeeeecccccceeEEEeechhhhhhhhhhhccccc
Confidence 9999999999999876543 22223 58899999999999999999999998 54 466677899999997654333
Q ss_pred --EEcCCcCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHhhccCcceeeeeeeee-cCCceEEEeeeeeeccchhh
Q 019240 150 --IFLPTEKHMTLDACAPLIATL--PLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDMRGELDDTAAF 224 (344)
Q Consensus 150 --~~l~~~~~l~~~~a~~ll~g~--~~~~~~~l~~~l~~L~~lf~e~d~~~lEINPL~v-~~g~~~alDaki~iDd~A~f 224 (344)
...++...+.......++.++ +..+..++..++.+++.+|.+.|++++|||||++ ++|+++|+||||++||||.|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~iEINPLiv~~dG~vvAlDAri~lDdnA~~ 232 (246)
T d1eucb2 153 FKEQIDIIEGIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEF 232 (246)
T ss_dssp EEEECBTTTBCCHHHHHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEETTTEEEECCEEEEECGGGGG
T ss_pred hhhcccccccccchHHHHHHHhcCCchhhhHHHHHHHHHHHHHHhcCCccEEeeeceEECCCCCEEEEEeEEeecCcchh
Confidence 234455567778887777655 3578889999999999999999999999999999 88889999999999999999
Q ss_pred hcccccccccCC
Q 019240 225 KNFKKWANIEFP 236 (344)
Q Consensus 225 R~~~~~~~~~~~ 236 (344)
|||+ |.+++++
T Consensus 233 r~~~-~~~~~d~ 243 (246)
T d1eucb2 233 RQKD-IFAMDDK 243 (246)
T ss_dssp GCHH-HHHTCCC
T ss_pred cCcc-HHHhhCC
Confidence 9998 6566543
No 3
>d1eucb1 c.23.4.1 (B:246-393) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=100.00 E-value=1.7e-34 Score=244.60 Aligned_cols=81 Identities=19% Similarity=0.271 Sum_probs=77.7
Q ss_pred hhhhccCCcEEEccCCcEEEEeeCChhhHHHHHHHhhhccCCCcceeeecCCCCCHHHHHHHHHHHhcccCccE-EEEee
Q 019240 255 EKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDVRDFTN-FGLFF 333 (344)
Q Consensus 255 e~~a~~~~l~yv~l~G~Ig~~vnGaGlamat~D~i~~~g~gg~pANFlD~GG~a~~~~v~~a~~~il~d~~v~~-~~~~~ 333 (344)
|.+|++++|+||+||||||||+|||||+|+|||+|++ +||+||||||+||+|+.++|++||++|++||+|++ |||||
T Consensus 4 E~~a~~~~l~yv~LdG~IG~i~NGAGlaMaTmD~i~~--~Gg~pANFlDiGGga~~e~v~~al~iil~d~~Vk~IlINIf 81 (148)
T d1eucb1 4 ENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFL--NGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIF 81 (148)
T ss_dssp HHHHHHTTCEEEECSCSEEEEESSHHHHHHHHHHHHH--TTCCBSEEEECCSSCCHHHHHHHHHHTTSCTTCCEEEEEEE
T ss_pred hHHHHHcCCcEEEecCcEEEEecCCccchhHHHHHHH--cCCCeeeEEecCCCCCHHHHHHHHHHHHCCCCccEEEEEee
Confidence 6678899999999999999999999999999999999 89999999999999999999999999999999997 59999
Q ss_pred ccee
Q 019240 334 GTQA 337 (344)
Q Consensus 334 ~~~~ 337 (344)
||+.
T Consensus 82 GGI~ 85 (148)
T d1eucb1 82 GGIV 85 (148)
T ss_dssp CSSS
T ss_pred Eeeh
Confidence 9974
No 4
>d2nu7b1 c.23.4.1 (B:239-388) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.3e-33 Score=240.09 Aligned_cols=81 Identities=21% Similarity=0.299 Sum_probs=77.9
Q ss_pred hhhhccCCcEEEccCCcEEEEeeCChhhHHHHHHHhhhccCCCcceeeecCCCCCHHHHHHHHHHHhcccCccE-EEEee
Q 019240 255 EKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDVRDFTN-FGLFF 333 (344)
Q Consensus 255 e~~a~~~~l~yv~l~G~Ig~~vnGaGlamat~D~i~~~g~gg~pANFlD~GG~a~~~~v~~a~~~il~d~~v~~-~~~~~ 333 (344)
|.+|++++++||+||||||||+|||||+|+|||+|++ +||+||||||+||+|+.++|++||++|++||+|++ |||||
T Consensus 4 E~~a~~~~l~yv~LdG~Ig~i~nGAGlamaTmD~i~~--~Gg~pANFlDiGG~a~~e~v~~al~lil~d~~vk~IlINif 81 (150)
T d2nu7b1 4 EAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKL--HGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIF 81 (150)
T ss_dssp HHHHHHTTCEEEECSSSEEEEESSHHHHHHHHHHHHH--TTCCBCEEEECCSCCCHHHHHHHHHHHHTSTTCCEEEEEEE
T ss_pred HHHHHHcCCcEEEecCcEEEEEcCCccchhhHHHHHH--CCCCeeEEEecCCCccHHHHHHHHHHHHcCCCCCEEEEEEe
Confidence 6788999999999999999999999999999999999 89999999999999999999999999999999997 59999
Q ss_pred ccee
Q 019240 334 GTQA 337 (344)
Q Consensus 334 ~~~~ 337 (344)
|++.
T Consensus 82 GGI~ 85 (150)
T d2nu7b1 82 GGIV 85 (150)
T ss_dssp SCSS
T ss_pred eeee
Confidence 9974
No 5
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]}
Probab=99.04 E-value=6.2e-10 Score=97.74 Aligned_cols=100 Identities=21% Similarity=0.176 Sum_probs=81.1
Q ss_pred HHHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHH
Q 019240 9 YDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGR 88 (344)
Q Consensus 9 yqak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~ 88 (344)
.-+|++|+++ |||+| +...+++ .+|+.++++++| +||||||....|+| ||.++.|.+++.++.+++
T Consensus 3 ~~~K~~l~~~-----gIptp--~~~~~~~--~~e~~~~~~~ig-~PvVvKP~~~~gs~----Gv~~v~~~~el~~a~~~~ 68 (220)
T d1vkza3 3 VYAKRFMKKY-----GIRTA--RFEVAET--PEELREKIKKFS-PPYVIKADGLARGK----GVLILDSKEETIEKGSKL 68 (220)
T ss_dssp HHHHHHHHHT-----TCCCC--CEEEESS--HHHHHHHHTTSC-SSEEEEESSCCSSC----CEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHC-----CCCCC--CeEEeCC--HHHHHHHHHHcC-CCEEEEeccccccc----cceeeccHHHHHHHhhhh
Confidence 4589999999 99888 8888766 468988899997 89999998777666 999999999999999988
Q ss_pred hcccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCC
Q 019240 89 LGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLG 127 (344)
Q Consensus 89 l~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~ 127 (344)
...... + ..-..+|||+++. +.|+.+....|...
T Consensus 69 ~~~~~~--~--~~~~~vliEe~i~-g~e~~v~~~~~~~~ 102 (220)
T d1vkza3 69 IIGELI--K--GVKGPVVIDEFLA-GNELSAMAVVNGRN 102 (220)
T ss_dssp HHTSSS--T--TCCSCEEEEECCC-SEEEEEEEEEETTE
T ss_pred cccccc--c--cccceEeeecccc-cccceeEEEEeCCE
Confidence 754432 1 1235799999998 78999988887654
No 6
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.98 E-value=3.6e-09 Score=92.66 Aligned_cols=108 Identities=14% Similarity=0.157 Sum_probs=79.4
Q ss_pred HHHHHHHHHhhhcCCCcccCCCce-EEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHH
Q 019240 9 YDSKRLLKEHLKRLAGLDLQICSA-QVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKG 87 (344)
Q Consensus 9 yqak~lL~~~~~~~~GI~vp~~~~-~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~ 87 (344)
+.+|++|+++ |||++ +.. .++++ .+|+.++++++| +||||||....++| ||.+..+.+|...+..+
T Consensus 2 ~~~k~~~~~a-----GvP~~-p~~~~~v~s--~~ea~~~~~~ig-~P~vvKP~~~~~s~----gv~~v~~~~el~~a~~~ 68 (214)
T d1ulza3 2 ARSKEVMKKA-----GVPVV-PGSDGVLKS--LEEAKALAREIG-YPVLLKATAGGGGR----GIRICRNEEELVKNYEQ 68 (214)
T ss_dssp HHHHHHHHHT-----TCCBC-CBCSSSCCC--HHHHHHHHHHHC-SSEEEEECSSSSCC----SCEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHc-----CCCcC-CCcCCCCCC--HHHHHHHHHHcC-CCEEEeeccccCCc----cceeeeccHHHHHHHHH
Confidence 4689999999 99863 132 23443 579999999997 89999998777667 89999999999888777
Q ss_pred HhcccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCCceEEee
Q 019240 88 RLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFS 133 (344)
Q Consensus 88 ~l~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~p~il~s 133 (344)
.+...... ..-..++|||++++..+....+..|..+.+..++
T Consensus 69 ~~~~~~~~----~~~~~viiEe~i~G~e~~~~~~~~d~~~~~~~i~ 110 (214)
T d1ulza3 69 ASREAEKA----FGRGDLLLEKFIENPKHIEYQVLGDKHGNVIHLG 110 (214)
T ss_dssp HHHHHHHT----TSCCCEEEEECCCSCEEEEEEEEECTTSCEEEEE
T ss_pred HHHHHHHh----cCCCCceeheeecCcceeeEEEEEcCCCeEEEEe
Confidence 65543321 1234699999999666666777888876554443
No 7
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=98.97 E-value=2.8e-09 Score=93.93 Aligned_cols=177 Identities=14% Similarity=0.113 Sum_probs=111.2
Q ss_pred HHHHHHHHHhhhcCCCccc-CCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHH
Q 019240 9 YDSKRLLKEHLKRLAGLDL-QICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKG 87 (344)
Q Consensus 9 yqak~lL~~~~~~~~GI~v-p~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~ 87 (344)
..+|+++++. |||+ |-..+.++++ .+|+.++++++| +||+|||--..|+| ||.++.|.+|.+++++.
T Consensus 3 ~~~~~~~~~~-----GvP~vp~~~~~~~~s--~dea~~~a~~iG-~PvivKp~~~~ggr----Gv~~v~~~~el~~a~~~ 70 (216)
T d2j9ga3 3 VSAIAAMKKA-----GVPCVPGSDGPLGDD--MDKNRAIAKRIG-YPVIIKASGGGGGR----GMRVVRGDAELAQSISM 70 (216)
T ss_dssp HHHHHHHHHH-----TCCBCCBCSSCCCSC--HHHHHHHHHHHC-SSEEEEEEEEETTE----EEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHc-----CcCCCCCCCCCCCCC--HHHHHHHHHHcC-CCEEEecccccCCc----eeEeecchhHHHHHHHH
Confidence 4689999999 9994 5222334443 579999999997 89999998777777 89999999999999887
Q ss_pred HhcccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCCceEEeeccCcccccc-cccceeEEEcCCcCCCCHHHHHHH
Q 019240 88 RLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFSECGGIEIEE-NWDKVKTIFLPTEKHMTLDACAPL 166 (344)
Q Consensus 88 ~l~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~p~il~s~~GGv~iE~-~~d~~~~~~l~~~~~l~~~~a~~l 166 (344)
.+...... ..-..++||+++...+|.-+.+..|..+-.+.++..... .+. ..+.....| ...++
T Consensus 71 ~~~ea~~~----~~~~~vlvE~~i~g~~~~~~~i~~dg~~~~~~~~~~~~~-~~~~~~~~~~~~P---~~~~~------- 135 (216)
T d2j9ga3 71 TRAEAKAA----FSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCS-MQRRHQKVVEEAP---APGIT------- 135 (216)
T ss_dssp HHHHTC------CCCCCEEEEECCSSCEEEEEEEEEESSSCEEEEEEEEEE-EEETTEEEEEEES---CTTCC-------
T ss_pred HHHHHHHh----cCCCceEeeeeecCcccceeEEEEcCCCCeeeccccccC-cccccCCeEEecc---Ccccc-------
Confidence 76432210 122469999999988899999999998644433311110 110 112222122 11122
Q ss_pred HcCCChHHHHHHHHHHHHHHHHhhccCcceeeeeeeeecCCceEEEeeeeeecc
Q 019240 167 IATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDD 220 (344)
Q Consensus 167 l~g~~~~~~~~l~~~l~~L~~lf~e~d~~~lEINPL~v~~g~~~alDaki~iDd 220 (344)
....+.+.+...++.+...-..+.-+|+- +.+++++.+...-+++.
T Consensus 136 -----~~~~~~~~~~~~~~~~~~~~~G~~~~e~~---~~~~~~~viEvnpR~~~ 181 (216)
T d2j9ga3 136 -----PELRRYIGERCAKACVDIGYRGAGTFEFL---FENGEFYFIEMNTRIQV 181 (216)
T ss_dssp -----HHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEEEEEEECSCCT
T ss_pred -----chhhhhhHHHHHHHHHHcCccCcceeEeE---ecCCeEEEEeecCcccc
Confidence 23344556666666666544444445543 25666777766655554
No 8
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]}
Probab=98.96 E-value=9.3e-10 Score=98.13 Aligned_cols=99 Identities=17% Similarity=0.152 Sum_probs=77.0
Q ss_pred HHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHHh
Q 019240 10 DSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRL 89 (344)
Q Consensus 10 qak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~l 89 (344)
=+|++|++| |||+| +...+++.+ ||.+.+++++ +|+||||..+.++| ||.++.+.+|+.++.+.++
T Consensus 4 f~K~~~~~~-----~IPt~--~~~~~~~~~--ea~~~~~~~~-~P~VvK~~~~~~gk----Gv~i~~~~~e~~~a~~~~~ 69 (224)
T d1gsoa3 4 FTKDFLARH-----KIPTA--EYQNFTEVE--PALAYLREKG-APIVIKADGLAAGK----GVIVAMTLEEAEAAVHDML 69 (224)
T ss_dssp HHHHHHHHT-----TCCBC--CEEEESSSS--HHHHHHHHHC-SSEEEEC------C----CEEEESSHHHHHHHHTTTT
T ss_pred HHHHHHHHc-----CCCCC--CceEeCCHH--HHHHHHHHcC-CCEEEEeCCccccc----ceeeehhHHHHHHHHHHHH
Confidence 379999999 99888 888887764 8888889996 89999999999888 7999999999999988887
Q ss_pred cccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCC
Q 019240 90 GTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLG 127 (344)
Q Consensus 90 ~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~ 127 (344)
..... +. .-..|+|||++. +.|+-+.+..|...
T Consensus 70 ~~~~~--~~--~~~~vliEefl~-G~E~s~~~i~dg~~ 102 (224)
T d1gsoa3 70 AGNAF--GD--AGHRIVIEEFLD-GEEASFIVMVDGEH 102 (224)
T ss_dssp CSCCT--TC--TTCCEEEEECCC-EEEEEEEEEEESSC
T ss_pred hcccc--cc--cCceEEeecccc-cccceeEEEeccCc
Confidence 64432 21 235799999998 78999999988765
No 9
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=98.79 E-value=4.9e-08 Score=89.04 Aligned_cols=101 Identities=14% Similarity=0.228 Sum_probs=82.2
Q ss_pred HHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHHh
Q 019240 10 DSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRL 89 (344)
Q Consensus 10 qak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~l 89 (344)
..|+++++. |||+| ++..+++ .+|+.++++++| +||||||....||| |+.+..+.+|+.++.++.+
T Consensus 4 ~~r~~~~~~-----gip~~--~~~~~~~--~~ea~~~~~~ig-~PvviKp~~~~gg~----G~~~v~~~~el~~~~~~a~ 69 (275)
T d1a9xa5 4 RFDVAMKKI-----GLETA--RSGIAHT--MEEALAVAADVG-FPCIIRPSFTMGGS----GGGIAYNREEFEEICARGL 69 (275)
T ss_dssp HHHHHHHHT-----TCCCC--SEEEESS--HHHHHHHHHHHC-SSEEEEETTCCTTT----TCEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHC-----CCCCC--CceEeCC--HHHHHHHHHHcC-CCEEEEECCCCCCC----ceEEeeCHHHHHHHHHHHH
Confidence 458899998 99988 7877765 469999999997 89999998777878 8889999999998887755
Q ss_pred cccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCCceEEe
Q 019240 90 GTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISF 132 (344)
Q Consensus 90 ~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~p~il~ 132 (344)
... .-..++||+++...+|+-+-+..|..+..++.
T Consensus 70 ~~~--------~~~~v~iEe~l~g~~e~~v~~~~d~~g~~~~~ 104 (275)
T d1a9xa5 70 DLS--------PTKELLIDESLIGWKEYEMEVVRDKNDNCIIV 104 (275)
T ss_dssp HHC--------TTSCEEEEECCTTSEEEEEEEEECTTCCEEEE
T ss_pred hhC--------CCCcEEEeeecCCchhheeeeEEecCCCEEEE
Confidence 421 11359999999988999999999987765544
No 10
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]}
Probab=98.70 E-value=1.4e-07 Score=81.28 Aligned_cols=166 Identities=13% Similarity=0.162 Sum_probs=106.0
Q ss_pred HHHHHHHHHhhhcCCCcccCCCceEEeecCC-----HHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHH
Q 019240 9 YDSKRLLKEHLKRLAGLDLQICSAQVTESTD-----FSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAE 83 (344)
Q Consensus 9 yqak~lL~~~~~~~~GI~vp~~~~~~~~~~~-----~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~ 83 (344)
+.+|++|+++ |||+| +..++++.+ .+++..+...++ +|+|+||....+++ ||....|.++...
T Consensus 2 ~~tk~~~~~~-----Giptp--~~~~~~~~~~~~~~~~~~~~~~~~l~-~P~vvKP~~g~~s~----Gv~~v~~~~el~~ 69 (210)
T d1iowa2 2 LRSKLLWQGA-----GLPVA--PWVALTRAEFEKGLSDKQLAEISALG-LPVIVKPSREGSSV----GMSKVVAENALQD 69 (210)
T ss_dssp HHHHHHHHHT-----TCCBC--CEEEEEHHHHHHCCCTHHHHHHHTTC-SSEEEEETTCCTTT----TCEEESSGGGHHH
T ss_pred HHHHHHHHHc-----CCCCC--CeEEEechhhcccchHHHHHHHHhcC-CCEEEeeccccCce----ecccccchhhhhH
Confidence 4689999999 99998 888775321 235556667786 89999998776666 7888889999988
Q ss_pred HHHHHhcccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCCceEEeeccCccccccc-cc-ceeEEEcCCcCCCCHH
Q 019240 84 FVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFSECGGIEIEEN-WD-KVKTIFLPTEKHMTLD 161 (344)
Q Consensus 84 ~a~~~l~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~p~il~s~~GGv~iE~~-~d-~~~~~~l~~~~~l~~~ 161 (344)
+.+.+... -..++||+++. +.|+.+.+..|...+.+.....+.+....- .. ..... ..+
T Consensus 70 ~~~~~~~~----------~~~vlve~~i~-g~e~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------- 130 (210)
T d1iowa2 70 ALRLAFQH----------DEEVLIEKWLS-GPEFTVAILGEEILPSIRIQPSGTFYDYEAKFLSDETQY-FCP------- 130 (210)
T ss_dssp HHHHHTTT----------CSEEEEEECCC-CCEEEEEEETTEECCCEEEECSSSSSCHHHHHTCSCCEE-ESS-------
T ss_pred HHHHhhcc----------Ccccccccccc-CceeEEEeecCcccceeEEecccceeeeccccccccccc-ccc-------
Confidence 87765431 14699999998 688888777665554444332333321110 00 00000 000
Q ss_pred HHHHHHcCCChHHHHHHHHHHHHHHHHhhccCcceeeeeeeee-cCCceEEEee
Q 019240 162 ACAPLIATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDM 214 (344)
Q Consensus 162 ~a~~ll~g~~~~~~~~l~~~l~~L~~lf~e~d~~~lEINPL~v-~~g~~~alDa 214 (344)
...+....+.+.++..++++.+.-.+..-+|+ .+ .+|+++.+..
T Consensus 131 ------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vdf---~~d~~g~~~~lEi 175 (210)
T d1iowa2 131 ------AGLEASQEANLQALVLKAWTTLGCKGWGRIDV---MLDSDGQFYLLEA 175 (210)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHHTCCSEEEEEE---EECTTSCEEEEEE
T ss_pred ------cccccccchhHHHHHHHHHHHhCCCCceEEEE---EECCCCCEEEEEE
Confidence 11233455677778888888877666555563 44 6667777665
No 11
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}
Probab=98.64 E-value=8e-07 Score=77.28 Aligned_cols=169 Identities=12% Similarity=0.051 Sum_probs=102.9
Q ss_pred HHHHHHHHHhhhcCCCcccCCCceEEeecCC--HHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHH
Q 019240 9 YDSKRLLKEHLKRLAGLDLQICSAQVTESTD--FSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVK 86 (344)
Q Consensus 9 yqak~lL~~~~~~~~GI~vp~~~~~~~~~~~--~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~ 86 (344)
+.+|++|+++ |||+| ++.+++..+ .+.+.+.++.+| +|+|+||....+++ ||.+..|.+|...+.+
T Consensus 3 ~~~k~~l~~~-----gi~tp--~~~~~~~~~~~~~~~~~~~~~~g-~P~VvKP~~g~~s~----GV~~~~~~~el~~~~~ 70 (228)
T d1ehia2 3 ALTKELLTVN-----GIRNT--KYIVVDPESANNWSWDKIVAELG-NIVFVKAANQGSSV----GISRVTNAEEYTEALS 70 (228)
T ss_dssp HHHHHHHHTT-----TCCCC--CEEEECTTGGGGCCHHHHHHHHC-SCEEEEESSCCTTT----TEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHc-----CCCCC--CEEEEchhhcChHHHHHHHHHhC-CCEEEEEeccCCCc----cceeccccchhhhhhh
Confidence 5789999999 99998 888775432 123445566776 89999997665555 7888999999998887
Q ss_pred HHhcccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCCceEEeeccCcccccccccceeEEEcCCcCCCCHHHHHHH
Q 019240 87 GRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLDACAPL 166 (344)
Q Consensus 87 ~~l~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~p~il~s~~GGv~iE~~~d~~~~~~l~~~~~l~~~~a~~l 166 (344)
+.... -..+++|+++...+|+.+++..+....+.... ...+.... ..+++....+...
T Consensus 71 ~~~~~----------~~~~liee~i~g~~e~~~~~~~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~~~k~~ 128 (228)
T d1ehia2 71 DSFQY----------DYKVLIEEAVNGARELEVGVIGNDQPLVSEIG---AHTVPNQG---------SGDGWYDYNNKFV 128 (228)
T ss_dssp HHTTT----------CSCEEEEECCCCSCEEEEEEEESSSCEEEEEE---EEECTTSS---------SSSCCCCHHHHTT
T ss_pred hhccc----------ccccccceEEeccceEEEEEeeCCCcceeeee---eeeccccc---------cccceeeeecccc
Confidence 76432 13599999999888988877665433222211 11110000 0001111111100
Q ss_pred ---------HcCCChHHHHHHHHHHHHHHHHhhccCcceeeeeeeee-cCCceEEEee
Q 019240 167 ---------IATLPLEFRGKIGDFIMGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDM 214 (344)
Q Consensus 167 ---------l~g~~~~~~~~l~~~l~~L~~lf~e~d~~~lEINPL~v-~~g~~~alDa 214 (344)
...+.....+.+.++..++++.+.-.+..-+|+ .+ .+|+++.++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lg~~~~~~iD~---~~d~~g~~~~lEv 183 (228)
T d1ehia2 129 DNSAVHFQIPAQLSPEVTKEVKQMALDAYKVLNLRGEARMDF---LLDENNVPYLGEP 183 (228)
T ss_dssp CCTTCEEESSCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEEE---EECTTCCEEEEEE
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHhhhhcCCeeeEEE---EEcCCCcEEEEEe
Confidence 012344566777888888888765444444553 44 5666777764
No 12
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]}
Probab=98.62 E-value=4.7e-07 Score=81.97 Aligned_cols=93 Identities=13% Similarity=0.220 Sum_probs=69.0
Q ss_pred HHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHHhcc
Q 019240 12 KRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGT 91 (344)
Q Consensus 12 k~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~l~~ 91 (344)
+++|++. |||+| ++..+++ .+||.++++++| +||+|||....||| |+.+..|.+|+.++.++....
T Consensus 3 ~~~l~~l-----gi~~p--~~~~v~s--~~ea~~~a~~iG-fPvivKps~~~gG~----G~~iv~~~~el~~~~~~a~~~ 68 (259)
T d1a9xa6 3 QHAVERL-----KLKQP--ANATVTA--IEMAVEKAKEIG-YPLVVRASYVLGGR----AMEIVYDEADLRRYFQTAVSV 68 (259)
T ss_dssp HHHHHHH-----TCCCC--CEEECCS--HHHHHHHHHHHC-SSEEEEC-----------CEEEECSHHHHHHHHHHCC--
T ss_pred HHHHHHC-----CCCCC--CceEECC--HHHHHHHHHHhC-CCEEEEECCCCCCC----ccEeecCHHHHHHHhhhhhcc
Confidence 6889999 99988 8888876 469999999997 89999997767777 889999999999888765432
Q ss_pred cchhcCCCcceeeEEEEeecCCCceEEEEEEEcCC
Q 019240 92 EVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRL 126 (344)
Q Consensus 92 ~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~ 126 (344)
. .-..++||+++...+|+-+-+..|..
T Consensus 69 ~--------~~~~vlie~~i~~~~Eiev~~i~Dg~ 95 (259)
T d1a9xa6 69 S--------NDAPVLLDHFLDDAVEVDVDAICDGE 95 (259)
T ss_dssp --------------EEEBCCTTCEEEEEEEEECSS
T ss_pred c--------ccchhhhhhhcCCCeEEEEEEEEeCC
Confidence 1 22469999999999999999999964
No 13
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=98.52 E-value=3e-07 Score=81.35 Aligned_cols=91 Identities=14% Similarity=0.126 Sum_probs=66.5
Q ss_pred HHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHHh
Q 019240 10 DSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRL 89 (344)
Q Consensus 10 qak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~l 89 (344)
-.|++|++. |||+| +.. +++++++ +||||||-...|+| ||.+..|.++...++++.+
T Consensus 4 ~~k~~l~~~-----Gip~P--~~~-----------~~~~~i~-~PvVVKP~~g~gs~----Gv~~v~~~~el~~a~~~~~ 60 (238)
T d2r7ka2 4 LEGKLLREA-----GLRVP--KKY-----------ESPEDID-GTVIVKFPGARGGR----GYFIASSTEEFYKKAEDLK 60 (238)
T ss_dssp HHHHHHHHT-----TCCCC--CEE-----------SSGGGCC-SCEEEECSCCCC-------EEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHC-----CCCCc--ccc-----------cCHhHCC-CCEEEEECCCCCCC----CeEEeCCHHHHHHHHHHHH
Confidence 458999999 99998 521 2235676 89999997767777 8999999999999998876
Q ss_pred cccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCC
Q 019240 90 GTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLG 127 (344)
Q Consensus 90 ~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~ 127 (344)
.....+ ...-..++||++++ +.|+.+.+..+...
T Consensus 61 ~~~~~~---~~~~~~v~vEe~i~-G~e~~v~~~~~~~~ 94 (238)
T d2r7ka2 61 KRGILT---DEDIANAHIEEYVV-GTNFCIHYFYSPLK 94 (238)
T ss_dssp HTTSCC---HHHHHHCEEEECCC-SEEEEEEEEEETTT
T ss_pred HHHhhc---cCCCCcEEEEEeec-CceEEEEEeecccc
Confidence 543210 11235699999998 78999998888763
No 14
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.47 E-value=1.6e-07 Score=82.45 Aligned_cols=89 Identities=15% Similarity=0.182 Sum_probs=64.8
Q ss_pred HHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHHh
Q 019240 10 DSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRL 89 (344)
Q Consensus 10 qak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~l 89 (344)
--|++|+++ |||+| +. . +.+++++ +||||||..-.|+| ||.+..|.++..+..++..
T Consensus 4 ~~k~~l~~~-----Gip~P--~~-----~------~~~~~i~-~P~IVKP~~g~gs~----Gv~~v~~~~e~~~~~~~~~ 60 (235)
T d2r85a2 4 LERKWLKKA-----GIRVP--EV-----Y------EDPDDIE-KPVIVKPHGAKGGK----GYFLAKDPEDFWRKAEKFL 60 (235)
T ss_dssp HHHHHHHHT-----TCCCC--CB-----C------SCGGGCC-SCEEEEECC----T----TCEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHc-----CCCCc--hh-----h------hCHHHcC-CCEEEEECCCCCCC----CeEEEechHHHHHHHHHHH
Confidence 458999999 99998 42 1 1234576 89999998877777 7899999999998888776
Q ss_pred cccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCC
Q 019240 90 GTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLG 127 (344)
Q Consensus 90 ~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~ 127 (344)
..... .....+++|++++ +.|+.+....++..
T Consensus 61 ~~~~~-----~~~~~~iiee~i~-G~~~~~~~~~~~~~ 92 (235)
T d2r85a2 61 GIKRK-----EDLKNIQIQEYVL-GVPVYPHYFYSKVR 92 (235)
T ss_dssp CCCSG-----GGCCSEEEEECCC-CEEEEEEEEEETTT
T ss_pred hhhhh-----CCCcchhHHhhcC-CeEEEEEEeecccc
Confidence 54321 2346799999998 67888888888763
No 15
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.45 E-value=1.3e-06 Score=78.89 Aligned_cols=81 Identities=9% Similarity=0.058 Sum_probs=64.2
Q ss_pred CHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHHhcccchhcCCCcceeeEEEEeecCCCceEE
Q 019240 39 DFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYY 118 (344)
Q Consensus 39 ~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~l~~~~~~~g~~~~v~~vLVee~~~~~~Ely 118 (344)
+.+|+.++++++| +||||||-...|+| ||.++.+.+|..++.+....... -..+||||++...+|.-
T Consensus 51 s~eea~~~a~~ig-fPvvVKP~~~~gs~----Gv~iv~~~~el~~a~~~a~~~s~--------~~~vlVEe~I~G~~~~~ 117 (267)
T d1w96a3 51 SPEDGLQKAKRIG-FPVMIKASEGGGGK----GIRQVEREEDFIALYHQAANEIP--------GSPIFIMKLAGRARHLE 117 (267)
T ss_dssp SHHHHHHHHHHHC-SSEEEEETTCCTTT----TEEEECSHHHHHHHHHHHHHHST--------TCCEEEEECCCSCEEEE
T ss_pred CHHHHHHHHHhcC-CCEEEEeecccCCe----eEEeecccchhhhhhhhhhhhcc--------cchhhhhhhccchhhhh
Confidence 3678999999997 89999998777777 89999999999988877654321 13589999999778888
Q ss_pred EEEEEcCCCceEEe
Q 019240 119 LSIVSDRLGCTISF 132 (344)
Q Consensus 119 lgi~~Dr~~p~il~ 132 (344)
+.+..|..+..+.+
T Consensus 118 ~~~~~~~~~~~v~~ 131 (267)
T d1w96a3 118 VQLLADQYGTNISL 131 (267)
T ss_dssp EEEEECTTSCEEEE
T ss_pred hhheeccCcceeee
Confidence 88888887655444
No 16
>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.20 E-value=1.2e-06 Score=73.11 Aligned_cols=61 Identities=15% Similarity=0.248 Sum_probs=54.5
Q ss_pred cEEEEeeCChhhHHHHHHHhhhccCCC---------------------cceeeecCCCCCHHHHHHHHHHHhcccCccEE
Q 019240 271 RIWTMVAGGGASVIYADTVGDLGYASE---------------------LGNYAEYSGAPNEEEVLQYARVVIDVRDFTNF 329 (344)
Q Consensus 271 ~Ig~~vnGaGlamat~D~i~~~g~gg~---------------------pANFlD~GG~a~~~~v~~a~~~il~d~~v~~~ 329 (344)
+|++|.|++|.++.+.|.+.. +|.+ +.|.+|++|.++.+.+.++++++++||+|+++
T Consensus 5 rvaiit~sGG~~~l~aD~~~~--~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d~~vd~v 82 (163)
T d2csua3 5 KVAIMTNAGGPGVLTADELDK--RGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQDPNVDML 82 (163)
T ss_dssp EEEEEESCHHHHHHHHHHHHT--TTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHSTTCSEE
T ss_pred eEEEEECChHHHHHHHHHHHH--cCCccCCCCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHcCCCcCEE
Confidence 499999999999999999998 4443 58999999999999999999999999999987
Q ss_pred EEee
Q 019240 330 GLFF 333 (344)
Q Consensus 330 ~~~~ 333 (344)
+.++
T Consensus 83 ~v~~ 86 (163)
T d2csua3 83 IAIC 86 (163)
T ss_dssp EEEE
T ss_pred EEee
Confidence 5444
No 17
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]}
Probab=98.02 E-value=7.2e-06 Score=69.46 Aligned_cols=90 Identities=21% Similarity=0.079 Sum_probs=64.5
Q ss_pred CcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHHhcccchhcCCCccee
Q 019240 24 GLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPIT 103 (344)
Q Consensus 24 GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~l~~~~~~~g~~~~v~ 103 (344)
|||+| +...+++. +++.++++++| +||||||-.-.|+| ||.+..|.+|..++.+....... ....
T Consensus 14 Gip~p--~~~~v~s~--~dl~~~~~~ig-~PvVvKP~~g~gs~----gv~~v~~~~el~~a~~~~~~~~~------~~~~ 78 (206)
T d1kjqa3 14 QLPTS--TYRFADSE--SLFREAVADIG-YPCIVKPVMSSSGK----GQTFIRSAEQLAQAWKYAQQGGR------AGAG 78 (206)
T ss_dssp CCCBC--CEEEESSH--HHHHHHHHHHC-SSEEEEESCC---C----CCEEECSGGGHHHHHHHHHHHSG------GGCC
T ss_pred CCCCC--CCeEECCH--HHHHHHHHHhC-CCEEEeeccCCccC----CceEEcCHHHHHHHHHHHHhhcc------cCcc
Confidence 99888 88888764 58999999997 89999998766666 77888888888877766543221 1123
Q ss_pred eEEEEeecCCCceEEEEEEEcCCCc
Q 019240 104 TFIVEPFVPHNQEYYLSIVSDRLGC 128 (344)
Q Consensus 104 ~vLVee~~~~~~Elylgi~~Dr~~p 128 (344)
.+++++......|..+....|..+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (206)
T d1kjqa3 79 RVIVEGVVKFDFEITLLTVSAVDGV 103 (206)
T ss_dssp CEEEEECCCCSEEEEEEEEEETTEE
T ss_pred eeeeeeccccceeeeeeeeecCCCc
Confidence 4677777777778888887777643
No 18
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]}
Probab=97.94 E-value=1.8e-05 Score=67.55 Aligned_cols=94 Identities=12% Similarity=0.024 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHH
Q 019240 8 EYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKG 87 (344)
Q Consensus 8 Eyqak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~ 87 (344)
-+.+|++++++ |||+| +.+++++.+ + ..+..++ +|+|+||-.-.+++ ||.++.|.+|...+.+.
T Consensus 2 K~~~~~~~~~~-----Gi~tP--~~~~~~~~~--~--~~~~~~~-fP~viKP~~gg~s~----Gv~~v~~~~el~~~~~~ 65 (211)
T d1e4ea2 2 KSLTYIVAKNA-----GIATP--AFWVINKDD--R--PVAATFT-YPVFVKPARSGSSF----GVKKVNSADELDYAIES 65 (211)
T ss_dssp HHHHHHHHHHT-----TCBCC--CEEEECTTC--C--CCGGGSC-SCEEEEESSCCTTT----TCEEECSGGGHHHHHHH
T ss_pred HHHHHHHHHHC-----CCCCC--CeEEECchh--H--HHHHhcC-CCEEEeeccccCcc----hhccccccccchhhccc
Confidence 36789999999 99998 888876543 2 2345676 89999996433333 68888999999888777
Q ss_pred HhcccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCCc
Q 019240 88 RLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGC 128 (344)
Q Consensus 88 ~l~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~p 128 (344)
+... ...+++|++++ +.|+-+.+..+...+
T Consensus 66 ~~~~----------~~~~~~e~~~~-~~~~~~~~~~~~~~~ 95 (211)
T d1e4ea2 66 ARQY----------DSKILIEQAVS-GCEVGCAVLGNSAAL 95 (211)
T ss_dssp HTTT----------CSSEEEEECCC-SEEEEEEEEEETTCC
T ss_pred cccc----------ccccccccccc-cccceeeccCCCcce
Confidence 6532 13489999997 667777766666543
No 19
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=97.85 E-value=1.2e-05 Score=67.65 Aligned_cols=96 Identities=18% Similarity=-0.027 Sum_probs=65.9
Q ss_pred HHHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHH
Q 019240 9 YDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGR 88 (344)
Q Consensus 9 yqak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~ 88 (344)
+--|++|++. |||+| +...+++. +|+.++++.+| +|+|+||-.-. +-.|++++..+.++ ...+.
T Consensus 3 ~~~K~~l~~~-----GIptp--~~~~v~s~--~d~~~~~~~ig-~P~vvKp~~~~---~~~~~~~v~~~~~~-~~~~~-- 66 (198)
T d3etja3 3 LTQKQLFDKL-----HLPTA--PWQLLAER--SEWPAVFDRLG-ELAIVKRRTGG---YDGRGQWRLRANET-EQLPA-- 66 (198)
T ss_dssp HHHHHHHHHT-----TCCBC--CEEEECCG--GGHHHHHHHHC-SCEEEEESSSC---BTTBSEEEECGGGG-GGSCG--
T ss_pred HHHHHHHHHC-----CcCCC--CceEECCH--HHHHHHHHHcC-CCeeeeecccc---cccceeeecchhhH-HHHHh--
Confidence 3469999999 99988 88888765 58888889997 89999985432 22356666644332 21111
Q ss_pred hcccchhcCCCcceeeEEEEeecCCCceEEEEEEEcCCCceEE
Q 019240 89 LGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIVSDRLGCTIS 131 (344)
Q Consensus 89 l~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~~Dr~~p~il 131 (344)
. .-..+++|+++....|+-..+..+..+.++.
T Consensus 67 ---~--------~~~~~i~ee~i~~~~~~~~~~~~~~~~~~~~ 98 (198)
T d3etja3 67 ---E--------CYGECIVEQGINFSGEVSLVGARGFDGSTVF 98 (198)
T ss_dssp ---G--------GTTTEEEEECCCCSEEEEEEEEECTTSCEEE
T ss_pred ---c--------cCceEEEeeeccccccccceeeecccceeee
Confidence 0 1134899999988888777777776655433
No 20
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]}
Probab=97.80 E-value=3.8e-06 Score=70.36 Aligned_cols=85 Identities=16% Similarity=0.156 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhhcCCCcccCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHH--
Q 019240 9 YDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVK-- 86 (344)
Q Consensus 9 yqak~lL~~~~~~~~GI~vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~-- 86 (344)
|..|++|++. |||+| +..++++ .+++.+.+++++ +|+|+||-.-.++| ||....+.++......
T Consensus 2 ~~~~~~l~~~-----GipvP--~t~~~~~--~~~~~~~~~~~g-~P~ivKP~~g~~g~----gv~~~~~~~~~~~~~~~~ 67 (192)
T d1uc8a2 2 WATSVALAKA-----GLPQP--KTALATD--REEALRLMEAFG-YPVVLKPVIGSWGR----LLAXXXXXXXXXXXXXXK 67 (192)
T ss_dssp HHHHHHHHHT-----TCCCC--CEEEESS--HHHHHHHHHHHC-SSEEEECSBCCBCS----HHHHHHHHHC--------
T ss_pred HHHHHHHHHc-----CcCCC--CEEEECC--HHHHHHHHHHhC-CCEEEECCcCCccc----ceeeccccccchhhHHHH
Confidence 5679999999 99998 8877765 468888888997 89999998665556 4543322222221111
Q ss_pred HHhcccchhcCCCcceeeEEEEeecCCCc
Q 019240 87 GRLGTEVEMGGCKGPITTFIVEPFVPHNQ 115 (344)
Q Consensus 87 ~~l~~~~~~~g~~~~v~~vLVee~~~~~~ 115 (344)
+.+... + -..++||++++...
T Consensus 68 ~~~~~~----~----~~~~lvqefi~g~~ 88 (192)
T d1uc8a2 68 EVLGGF----Q----HQLFYIQEYVEKPG 88 (192)
T ss_dssp ----CT----T----TTCEEEEECCCCSS
T ss_pred HHHhcc----C----CCCEEEEEecCCCC
Confidence 111111 1 13599999998643
No 21
>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.23 E-value=0.0039 Score=52.82 Aligned_cols=62 Identities=13% Similarity=-0.023 Sum_probs=45.6
Q ss_pred hccccCCCcEEEEeccccCcccCcCeEEEeCCHHHHHHHHHHHhcccchhcCCCcceeeEEEEeecCCCceEEEEEE
Q 019240 46 KEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQEYYLSIV 122 (344)
Q Consensus 46 aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~s~eea~~~a~~~l~~~~~~~g~~~~v~~vLVee~~~~~~Elylgi~ 122 (344)
.....+ +|+|+||..-.+|| ||.+..++++.+.+.+.+... . ..++|||+++...|+-+.+.
T Consensus 45 ~~~~~~-~PvVvKP~~g~~g~----Gv~~v~~~~~l~~~~~~~~~~-----~-----~~~~vqe~I~~~~dirv~vi 106 (206)
T d1i7na2 45 MLTLPT-FPVVVKIGHAHSGM----GKVKVENHYDFQDIASVVALT-----Q-----TYATAEPFIDAKYDIRVQKI 106 (206)
T ss_dssp GSSCCC-SSEEEEESSCSTTT----TEEEECSHHHHHHHHHHHHHH-----T-----CCEEEEECCCEEEEEEEEEE
T ss_pred HhhhcC-CceEEecCCCCCCC----CeEEEeecchhhhHHHHHhhc-----c-----CeEEEEEeecccceEEEEEE
Confidence 334454 89999998766666 788899999988877666432 1 24899999986667777665
No 22
>d2csua2 c.23.4.1 (A:130-290) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=81.70 E-value=1.1 Score=36.03 Aligned_cols=61 Identities=8% Similarity=0.122 Sum_probs=52.9
Q ss_pred CCcEEEEeeCChhhHHHHHHHhhhccCCCcceeeecCCCCCHHHHHHHHHHHhcccCccEEEEe
Q 019240 269 KGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDVRDFTNFGLF 332 (344)
Q Consensus 269 ~G~Ig~~vnGaGlamat~D~i~~~g~gg~pANFlD~GG~a~~~~v~~a~~~il~d~~v~~~~~~ 332 (344)
.|.||++.--++++...++.+.. .|--..-+.-+|+.+.. .+..+++.+.+||+++.+++.
T Consensus 20 ~G~valiSqSG~l~~~~~~~~~~--~g~G~s~~vs~Gn~~~~-~~~d~l~~l~~D~~t~~i~l~ 80 (161)
T d2csua2 20 KGNVAFISQSGALGAGIVYKTIK--EDIGFSKFISVGNMADV-DFAELMEYLADTEEDKAIALY 80 (161)
T ss_dssp ECSEEEEESCHHHHHHHHHHHHH--TTCEESEEEECTTCCSS-CHHHHHHHHTTCSSCCEEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHh--CCCCeeEEEecCCcccc-CHHHHHHHHhcCCCCcEEEEE
Confidence 69999999999999999999988 44557888999988887 688999999999999987654
No 23
>d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]}
Probab=64.26 E-value=2.3 Score=34.34 Aligned_cols=40 Identities=18% Similarity=0.023 Sum_probs=29.0
Q ss_pred cCCCceEEeecCCHHhHHhhccccCCCcEEEEeccccCcccCcCeEEEeC
Q 019240 27 LQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNL 76 (344)
Q Consensus 27 vp~~~~~~~~~~~~~ea~~aa~~lg~~pvVvKaqv~~g~Rgk~GgV~l~~ 76 (344)
+| +..++.+ ++++.+..++. +++|+||..-.+|| ||.+..
T Consensus 13 ~P--~Tlit~~--~~~~~~f~~~~--g~vV~Kpl~gs~G~----gv~~~~ 52 (192)
T d1gsaa2 13 TP--ETLVTRN--KAQLKAFWEKH--SDIILKPLDGMGGA----SIFRVK 52 (192)
T ss_dssp SC--CEEEESC--HHHHHHHHHHH--SSEEEECSSCCTTT----TCEEEC
T ss_pred CC--CeEEECC--HHHHHHHHHHc--CCeEEEEcCCCeEE----EEEEee
Confidence 45 8878765 46887777775 38999998777777 666653
No 24
>d1oi7a2 c.23.4.1 (A:122-288) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=54.36 E-value=7.2 Score=30.83 Aligned_cols=62 Identities=11% Similarity=0.086 Sum_probs=49.6
Q ss_pred CCcEEEEeeCChhhHHHHHHHhhhccCCCcceeeecCCCCCH-HHHHHHHHHHhcccCccEEEEe
Q 019240 269 KGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNE-EEVLQYARVVIDVRDFTNFGLF 332 (344)
Q Consensus 269 ~G~Ig~~vnGaGlamat~D~i~~~g~gg~pANFlD~GG~a~~-~~v~~a~~~il~d~~v~~~~~~ 332 (344)
.|+||++.-=++++...++.... .|-...-+.-+|+++.. -+....++.+.+||..+.+++.
T Consensus 23 ~G~va~iSQSG~~~~~~~~~~~~--~g~g~s~~~~~G~~~~~~~~~~d~l~~~~~D~~t~vI~l~ 85 (167)
T d1oi7a2 23 RGRVGIISRSGTLTYEAAAALSQ--AGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLI 85 (167)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHH--TTCCEEEEEECCSSSCCSSCHHHHHHHHHTCTTCCEEEEE
T ss_pred CCcEEEEEeccHHHHHHHHHHHH--cCCCceeEEEecceeecCchHHHHHHHHhhccccceeeEe
Confidence 59999999999999999999998 44456667778877542 3566889999999999987543
No 25
>d1euca2 c.23.4.1 (A:131-306) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=37.27 E-value=22 Score=28.01 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=45.2
Q ss_pred CCcEEEEeeCChhhHHHHHHHhhhccCCCcceeeecCCCCC-HHHHHHHHHHHhcccCccEEEE
Q 019240 269 KGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPN-EEEVLQYARVVIDVRDFTNFGL 331 (344)
Q Consensus 269 ~G~Ig~~vnGaGlamat~D~i~~~g~gg~pANFlD~GG~a~-~~~v~~a~~~il~d~~v~~~~~ 331 (344)
.|+||++.--++++...++..... |-.-.-+.-+|++.. .-.+...++.+.+||..+.++.
T Consensus 23 ~G~iaivSQSG~l~~~l~~~~~~~--g~g~~~~~~~g~~~~~~~~~~d~l~~~~~d~~t~~i~~ 84 (176)
T d1euca2 23 KGRIGIVSRSGTLTYEAVHQTTQV--GLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIIL 84 (176)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHT--TCCEEEEEECCSCSSCSCCHHHHHHHHHHCTTCCEEEE
T ss_pred CCCEEEEeCCcHHHHHHHHHHHhc--CCceEEEEecccchhhhhHHHHHHHHHHhhccCcccce
Confidence 699999999999999999998873 333444555555522 2356778899999999987644
No 26
>d2nu7a2 c.23.4.1 (A:122-287) Succinyl-CoA synthetase, alpha-chain, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.45 E-value=24 Score=27.42 Aligned_cols=62 Identities=10% Similarity=0.124 Sum_probs=48.3
Q ss_pred CCcEEEEeeCChhhHHHHHHHhhhccCCCcceeeecCCCCCHH-HHHHHHHHHhcccCccEEEEe
Q 019240 269 KGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEE-EVLQYARVVIDVRDFTNFGLF 332 (344)
Q Consensus 269 ~G~Ig~~vnGaGlamat~D~i~~~g~gg~pANFlD~GG~a~~~-~v~~a~~~il~d~~v~~~~~~ 332 (344)
.|+||.+.--++++...++.... .|.-..-+.-+|+++... .....+..+.+||..+.++..
T Consensus 23 ~G~iaiiSQSG~~~~~l~~~~~~--~~~g~s~~vs~Gn~~~~~~~~~~~~~~~~dd~~t~vi~~~ 85 (166)
T d2nu7a2 23 PGKVGIVSRSGTLTYEAVKQTTD--YGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMI 85 (166)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHH--TTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhhh--hhcCcceeeccCCCcccchHHHHHHHhhccCCccEEEEEE
Confidence 69999999999999999999987 555677778888887643 245666777888888876543
Done!