BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019243
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CD63|Y5729_DICDI J domain-containing protein DDB_G0295729 OS=Dictyostelium
discoideum GN=DDB_G0295729 PE=4 SV=1
Length = 1346
Score = 40.8 bits (94), Expect = 0.015, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 98 EYDWEKEMRRRVKEIEEMRELEKKAEELQSKAEEDDSESEAKEETEEEKRMRVRRELEKV 157
E++ +KE+ + KEIE +E+E+ EE + K E E ++E E ++ + +++E+E++
Sbjct: 642 EFERQKEIEHQ-KEIERQKEIERLKEENRLKEIEHQREIHRQKELEIQREIELQKEIERI 700
Query: 158 AKEQAERRATAQ 169
+E+ +R+ Q
Sbjct: 701 NQEEKKRKQYEQ 712
Score = 33.5 bits (75), Expect = 2.3, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 19/99 (19%)
Query: 96 KEEYDWEKEMRR-----RVKEIEEMRELEKKAE-------ELQSKAEEDDSESEAKEETE 143
++E + +KE+ R R+KEIE RE+ ++ E ELQ + E + E + +++ E
Sbjct: 652 QKEIERQKEIERLKEENRLKEIEHQREIHRQKELEIQREIELQKEIERINQEEKKRKQYE 711
Query: 144 EEKRMRVRRELEKVAKEQAERRATAQLMFELGQKAYGKG 182
+E + + ELEK + Q E+ ELG++ +G
Sbjct: 712 QE-LLSKQIELEKEKERQLEKE------IELGRERLIRG 743
>sp|P23231|TOM70_NEUCR Mitochondrial import receptor subunit tom-70 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=tom-70 PE=2 SV=2
Length = 624
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 105 MRRRVKEIEEMRELEKKAEELQSKAEEDDSESEAKEETEEEKRMRVRR-------ELEKV 157
+R+ ++ E +L KK + +AE+ ++E + +TEE + + EL ++
Sbjct: 60 LRKGSEQKESGPKLSKKERRKRKQAEKGEAEKASTSKTEEAAPTQPKAAAVESADELPEI 119
Query: 158 AKEQA------ERRATAQLMFELGQKAYGKGMYGRAIEFLEGALTIIPRPTFFGGEIQIW 211
+E ER+A A + ELG KAYG + +AI+ A+ P P ++
Sbjct: 120 DEESVVRLSEDERKAYAAKLKELGNKAYGSKDFNKAIDLYSKAIICKPDPVYYSNRAACH 179
Query: 212 LAMA 215
A+A
Sbjct: 180 NALA 183
>sp|A7EMM3|NST1_SCLS1 Stress response protein nst1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=nst1 PE=3 SV=1
Length = 1171
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 115 MRELE-KKAEELQSKAEEDDSESEAKEETEEEKRMRVRRELEKVAKEQAERRA 166
+RE+E KKAEE + K EE+ + EA+++ +EE+R+R E ++ +EQ ER+A
Sbjct: 597 LREIEEKKAEEQRLKREENRKKKEAQKKADEEERVRKEAEKQRRLQEQRERQA 649
>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster GN=spen PE=1 SV=2
Length = 5560
Score = 36.6 bits (83), Expect = 0.32, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 95 EKEEYDWEKEMRRRVKEIEEMRELEKKAEELQSKAEEDDSESEAKEET------EEEKRM 148
++E + EKE+R + +EMRE E++ +EL + ++ + E KE++ E+E R
Sbjct: 2015 QRERDNREKELRDKDLREKEMREKEQREKELHREKDQREREHREKEQSRRAMDVEQEGRG 2074
Query: 149 RVRRELEKVAKEQAE 163
REL K + +
Sbjct: 2075 GRMRELSSYQKSKMD 2089
Score = 36.2 bits (82), Expect = 0.35, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 102 EKEMRRRVKEIEEMRELEKKAEELQSKAEEDDSESEAKEETEEEKRMRVRRELEKVAKEQ 161
EKE+R + +E RE + + +EL+ K + E ++ +E R + +RE E KEQ
Sbjct: 2002 EKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQREREHREKEQ 2061
Query: 162 AER 164
+ R
Sbjct: 2062 SRR 2064
Score = 33.1 bits (74), Expect = 3.3, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 87 EENGNGNGEKEEYDWEKEMRRRVKEIEEMRELEKKAEELQSKAEEDDSESEAKEETEEEK 146
E+ N EKE D K++R + EMRE E++ +EL E+D E E +E+ + +
Sbjct: 2014 EQRERDNREKELRD--KDLREK-----EMREKEQREKELHR--EKDQREREHREKEQSRR 2064
Query: 147 RMRVRRE 153
M V +E
Sbjct: 2065 AMDVEQE 2071
>sp|Q8YEB3|IF2_BRUME Translation initiation factor IF-2 OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=infB PE=3 SV=2
Length = 959
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 102 EKEMRRRVKEIEEMRELEKKA---EELQSKAEED-----DSESEAKEETEEEKRMRVRRE 153
E + RRR E ++RE+E++A EE + +AEED + E A+ + EEE R++ E
Sbjct: 155 EMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEHEESARRQAEEEARLKAEAE 214
Query: 154 LEKVAKEQAERR 165
+ A+E+A +R
Sbjct: 215 ARRKAEEEAAKR 226
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 35.4 bits (80), Expect = 0.61, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 95 EKEEYDWEKEMRRRVKEI--EEMRELEKKAEELQSKAEEDDSESEAKEETEEEKRMRVRR 152
E+E E+E++R+ +E E +E +K EEL+ + +E + EA + E+E R++
Sbjct: 2793 EQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQE-RLQKEE 2851
Query: 153 ELEKVAKEQAERR 165
EL++ +E+ ER+
Sbjct: 2852 ELKRQEQERLERK 2864
Score = 33.5 bits (75), Expect = 2.1, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 51/79 (64%), Gaps = 10/79 (12%)
Query: 95 EKEEYDWEKEMRR----RVKEIEEMRELEK----KAEELQSKAEEDDSESEAKEETEEEK 146
++E+ E+E++R R+++ E ++ E+ K EEL+ + E++ E E +E+ ++E+
Sbjct: 2765 KQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELK-RQEQERLEREKQEQLQKEE 2823
Query: 147 RMRVRRELEKVAKEQAERR 165
++ R+E E++ KE+A +R
Sbjct: 2824 ELK-RQEQERLQKEEALKR 2841
>sp|Q8FXT2|IF2_BRUSU Translation initiation factor IF-2 OS=Brucella suis biovar 1
(strain 1330) GN=infB PE=3 SV=1
Length = 959
Score = 35.4 bits (80), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 102 EKEMRRRVKEIEEMRELEKKA---EELQSKAEED-----DSESEAKEETEEEKRMRVRRE 153
E + RRR E ++RE+E++A EE + +AEED + E A+ + EEE R++ E
Sbjct: 155 EMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREESARRQAEEEARLKAEAE 214
Query: 154 LEKVAKEQAERR 165
+ A+E+A +R
Sbjct: 215 ARRKAEEEAAKR 226
>sp|A5VTB2|IF2_BRUO2 Translation initiation factor IF-2 OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=infB PE=3 SV=2
Length = 959
Score = 35.4 bits (80), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 102 EKEMRRRVKEIEEMRELEKKA---EELQSKAEED-----DSESEAKEETEEEKRMRVRRE 153
E + RRR E ++RE+E++A EE + +AEED + E A+ + EEE R++ E
Sbjct: 155 EMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREESARRQAEEEARLKAEAE 214
Query: 154 LEKVAKEQAERR 165
+ A+E+A +R
Sbjct: 215 ARRKAEEEAAKR 226
>sp|A9M9Z4|IF2_BRUC2 Translation initiation factor IF-2 OS=Brucella canis (strain ATCC
23365 / NCTC 10854) GN=infB PE=3 SV=1
Length = 959
Score = 35.4 bits (80), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 102 EKEMRRRVKEIEEMRELEKKA---EELQSKAEED-----DSESEAKEETEEEKRMRVRRE 153
E + RRR E ++RE+E++A EE + +AEED + E A+ + EEE R++ E
Sbjct: 155 EMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREESARRQAEEEARLKAEAE 214
Query: 154 LEKVAKEQAERR 165
+ A+E+A +R
Sbjct: 215 ARRKAEEEAAKR 226
>sp|B0CK11|IF2_BRUSI Translation initiation factor IF-2 OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=infB PE=3 SV=1
Length = 959
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 102 EKEMRRRVKEIEEMRELEKKA---EELQSKAEED-----DSESEAKEETEEEKRMRVRRE 153
E + RRR E ++RE+E++A EE + +AEED + E A+ + EEE R++ E
Sbjct: 155 EMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREESARRQAEEEARLKAEAE 214
Query: 154 LEKVAKEQAERR 165
+ A+E+A +R
Sbjct: 215 ARRKAEEEAAKR 226
>sp|Q57AA0|IF2_BRUAB Translation initiation factor IF-2 OS=Brucella abortus biovar 1
(strain 9-941) GN=infB PE=3 SV=1
Length = 959
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 102 EKEMRRRVKEIEEMRELEKKA---EELQSKAEED-----DSESEAKEETEEEKRMRVRRE 153
E + RRR E ++RE+E++A EE + +AEED + E A+ + EEE R++ E
Sbjct: 155 EMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREESARRQAEEEARLKAEAE 214
Query: 154 LEKVAKEQAERR 165
+ A+E+A +R
Sbjct: 215 ARRKAEEEAAKR 226
>sp|Q2YQR7|IF2_BRUA2 Translation initiation factor IF-2 OS=Brucella abortus (strain
2308) GN=infB PE=3 SV=1
Length = 959
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 102 EKEMRRRVKEIEEMRELEKKA---EELQSKAEED-----DSESEAKEETEEEKRMRVRRE 153
E + RRR E ++RE+E++A EE + +AEED + E A+ + EEE R++ E
Sbjct: 155 EMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREESARRQAEEEARLKAEAE 214
Query: 154 LEKVAKEQAERR 165
+ A+E+A +R
Sbjct: 215 ARRKAEEEAAKR 226
>sp|Q28IV3|RPAP3_XENTR RNA polymerase II-associated protein 3 OS=Xenopus tropicalis
GN=rpap3 PE=2 SV=1
Length = 657
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 94 GEKEEYDWEKEMRRRVKEIEEMRELEKKAEELQSKAEEDDSESEAKEETEEEKRMRVRRE 153
G KE D+EK + V E EL K +ELQS S S+ +E+ E+++ V E
Sbjct: 218 GAKE--DYEKVLELDVNNFEAKNELRKINKELQS------STSDVQEKEAIEEKITVENE 269
Query: 154 LEKVAKEQAERRATAQLMFELGQKAYGKGMYGRAIE 189
EK E +R+ A + +LG + +G Y AI+
Sbjct: 270 EEKKQIEIQQRKQQAIMQKDLGNAYFKEGKYEIAID 305
>sp|A6RW62|NST1_BOTFB Stress response protein nst1 OS=Botryotinia fuckeliana (strain
B05.10) GN=nst1 PE=3 SV=1
Length = 1168
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 95 EKEEYDWEKEMRRRVKEIEEMRELE-KKAEELQSKAEEDDSESEAKEETEEEKRMRVRRE 153
EK D EK E +RE+E KKAE + K EE+ + EA+++ +EE+R+R E
Sbjct: 530 EKARKDAEK-----AAEEASLREIEEKKAEAQRLKREENRKKKEAQKKADEEERVRKESE 584
Query: 154 LEKVAKEQAERRA 166
++ +EQ ER+A
Sbjct: 585 KQRRLQEQRERQA 597
>sp|A6WWW5|IF2_OCHA4 Translation initiation factor IF-2 OS=Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168) GN=infB PE=3 SV=1
Length = 964
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 102 EKEMRRRVKEIEEMRELEKKA---EELQSKAEED-----DSESEAKEETEEEKRMRVRRE 153
E + RRR E ++RE+E++A EE + +AEED + E A+ + EEE R++ +
Sbjct: 157 EMDARRRALEEAQVREVEERARAVEEAKRRAEEDARRAKEREESARRQAEEEARLKAEAD 216
Query: 154 LEKVAKEQAERR 165
+ A+E+A +R
Sbjct: 217 ARRKAEEEAAKR 228
>sp|Q0WT31|PMTP_ARATH Probable methyltransferase PMT25 OS=Arabidopsis thaliana
GN=At2g34300 PE=1 SV=2
Length = 770
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 52 KSLDSEGESWNHRVVTRGKVNSKVNAVDFDAGS----------SDEENGNGNGEKEEYDW 101
K+ ++E + N++V T + +++ N V+ +G SD+ NG+G+GEKE
Sbjct: 80 KNEENEAATENNQVKTDSENSAEGNQVNESSGEKTEAGEERKESDDNNGDGDGEKE---- 135
Query: 102 EKEMRRRVKEI--EEMRELEKKAEELQSKAEEDDSE-SEAKEETEEEKRMRVRRELEKVA 158
+ VKE+ E +K+ +L+ EE+ SE EE EE EK +
Sbjct: 136 -----KNVKEVGSESDETTQKEKTQLEESTEENKSEDGNGNEEKAEENASETEESTEKSS 190
Query: 159 KE 160
KE
Sbjct: 191 KE 192
>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=nst1 PE=3 SV=1
Length = 1201
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 103 KEMRRRVKEIEEMRELEKKAEELQSKAEEDDSESEAKEETEE----EKRMRVRRELEKVA 158
+E RR+ +E ++ RE E+KA+E + +E + + +EE E E++ R ++ELEK
Sbjct: 592 EEQRRKREEQKKKREAERKAQEAERLRKEAEKQKRLREERERQAEIERKQREQKELEKKR 651
Query: 159 KEQA 162
+E+A
Sbjct: 652 REEA 655
>sp|P33332|SEC3_YEAST Exocyst complex component SEC3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC3 PE=1 SV=1
Length = 1336
Score = 31.6 bits (70), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 96 KEEYDWEKEMRRRVKEIEEMRELE----KKAEELQSKAEEDDSESEAKEETEEEKRMRVR 151
+EE ++E R+R E+E R+LE K+ EL++K + E + + + EEE+R++
Sbjct: 363 EEERRIKQEERKRQMELEHQRQLEEEERKRQMELEAKKQ---MELKRQRQFEEEQRLKKE 419
Query: 152 RELEKVAKEQAERRATAQL 170
REL ++ ++Q E+ +L
Sbjct: 420 RELLEIQRKQREQETAERL 438
>sp|Q9VMA7|TGO1_DROME Transport and Golgi organization protein 1 OS=Drosophila
melanogaster GN=Tango1 PE=1 SV=2
Length = 1430
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 91 NGNGEKEEYDWEKEMRRRVKEIEEMRELEKKAEE---LQSKA-------EEDDSESEAKE 140
N N ++ E+E +R V E EE + L+++A++ LQ +A EE + + +E
Sbjct: 489 NPNNYYKQLQEEQEKQRLVAEAEEQKRLQEEADQQKRLQEEAALNKRLLEEAEQQKRLQE 548
Query: 141 ETEEEKRMRVRRELEKVAKEQAERR 165
E E++KR++ EL K E+AE++
Sbjct: 549 EAEQQKRLQEEAELNKRLLEEAEKQ 573
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,288,775
Number of Sequences: 539616
Number of extensions: 5818638
Number of successful extensions: 76555
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 1922
Number of HSP's that attempted gapping in prelim test: 45471
Number of HSP's gapped (non-prelim): 20613
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)