Query 019244
Match_columns 344
No_of_seqs 309 out of 1985
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 13:06:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019244.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019244hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 2.7E-71 9.3E-76 531.2 31.6 320 4-330 2-348 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 1.1E-64 3.6E-69 495.1 33.2 330 3-332 26-385 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 3.9E-64 1.3E-68 487.8 32.9 326 2-333 11-363 (368)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 6.4E-63 2.2E-67 480.3 36.7 342 3-344 3-370 (370)
5 1p4c_A L(+)-mandelate dehydrog 100.0 4.4E-61 1.5E-65 468.6 34.8 329 3-334 4-358 (380)
6 1kbi_A Cytochrome B2, L-LCR; f 100.0 1E-60 3.4E-65 481.0 33.7 325 3-333 121-482 (511)
7 3sr7_A Isopentenyl-diphosphate 100.0 2.2E-45 7.4E-50 354.6 23.4 274 41-333 54-357 (365)
8 3vkj_A Isopentenyl-diphosphate 100.0 3.9E-42 1.3E-46 332.8 21.7 277 41-333 27-345 (368)
9 1vcf_A Isopentenyl-diphosphate 100.0 5.5E-43 1.9E-47 335.6 13.7 291 23-328 8-329 (332)
10 2qr6_A IMP dehydrogenase/GMP r 100.0 1.2E-38 4.2E-43 312.0 11.5 287 15-331 13-392 (393)
11 1p0k_A Isopentenyl-diphosphate 100.0 2.4E-37 8.1E-42 298.4 20.2 273 39-332 21-329 (349)
12 1ypf_A GMP reductase; GUAC, pu 100.0 6.8E-37 2.3E-41 293.7 21.1 268 35-333 8-326 (336)
13 2c6q_A GMP reductase 2; TIM ba 100.0 5.9E-34 2E-38 274.4 16.2 267 36-331 15-344 (351)
14 3r2g_A Inosine 5'-monophosphat 100.0 1.5E-30 5.3E-35 250.0 20.4 254 41-327 8-317 (361)
15 1eep_A Inosine 5'-monophosphat 100.0 3.4E-28 1.2E-32 238.7 21.1 285 40-332 9-386 (404)
16 1ea0_A Glutamate synthase [NAD 99.9 4.8E-27 1.6E-31 254.6 15.8 282 39-330 821-1168(1479)
17 1ofd_A Ferredoxin-dependent gl 99.9 6.8E-26 2.3E-30 246.1 19.7 285 41-331 840-1204(1520)
18 3khj_A Inosine-5-monophosphate 99.9 1.1E-24 3.9E-29 210.2 21.5 255 41-327 13-331 (361)
19 3ffs_A Inosine-5-monophosphate 99.9 2.1E-23 7E-28 203.2 20.1 279 42-327 11-370 (400)
20 4fo4_A Inosine 5'-monophosphat 99.9 1.7E-23 5.7E-28 202.0 18.7 256 42-327 15-335 (366)
21 4af0_A Inosine-5'-monophosphat 99.9 1.3E-21 4.5E-26 193.8 19.2 141 187-327 309-523 (556)
22 3usb_A Inosine-5'-monophosphat 99.9 3.9E-20 1.3E-24 186.3 22.9 141 187-327 284-481 (511)
23 2e6f_A Dihydroorotate dehydrog 99.8 3.5E-20 1.2E-24 175.7 17.7 133 187-328 148-310 (314)
24 4avf_A Inosine-5'-monophosphat 99.8 2.5E-19 8.4E-24 179.7 24.4 141 187-327 257-459 (490)
25 1me8_A Inosine-5'-monophosphat 99.8 2.1E-20 7.1E-25 188.1 13.6 144 187-330 270-476 (503)
26 4fxs_A Inosine-5'-monophosphat 99.8 8.3E-19 2.8E-23 176.0 21.8 141 187-327 259-458 (496)
27 2cu0_A Inosine-5'-monophosphat 99.8 2.9E-19 9.8E-24 179.2 18.0 139 188-329 257-455 (486)
28 1jub_A Dihydroorotate dehydrog 99.8 1E-18 3.5E-23 165.3 20.1 133 187-327 146-307 (311)
29 1gte_A Dihydropyrimidine dehyd 99.8 1.1E-18 3.9E-23 189.0 21.2 133 185-326 689-851 (1025)
30 4ef8_A Dihydroorotate dehydrog 99.8 4E-18 1.4E-22 163.8 21.3 132 187-327 181-342 (354)
31 1ep3_A Dihydroorotate dehydrog 99.8 1.7E-17 5.9E-22 156.5 22.3 131 186-327 151-305 (311)
32 1vrd_A Inosine-5'-monophosphat 99.8 2.2E-18 7.7E-23 173.0 16.2 142 187-328 265-463 (494)
33 1jcn_A Inosine monophosphate d 99.8 3.8E-18 1.3E-22 172.1 14.8 140 186-327 282-482 (514)
34 3oix_A Putative dihydroorotate 99.8 4.1E-17 1.4E-21 156.3 19.7 132 188-327 182-340 (345)
35 1f76_A Dihydroorotate dehydrog 99.7 4.9E-17 1.7E-21 155.5 17.6 214 58-288 42-323 (336)
36 1zfj_A Inosine monophosphate d 99.7 1.5E-17 5.1E-22 166.8 13.0 144 187-330 261-464 (491)
37 3zwt_A Dihydroorotate dehydrog 99.7 3.6E-16 1.2E-20 151.0 22.1 132 189-328 203-364 (367)
38 3i65_A Dihydroorotate dehydrog 99.7 3.7E-16 1.3E-20 152.3 20.6 122 199-328 268-411 (415)
39 3tjx_A Dihydroorotate dehydrog 99.7 1.5E-15 5.3E-20 146.2 20.4 131 189-328 183-343 (354)
40 1vhn_A Putative flavin oxidore 99.7 1.4E-16 4.7E-21 151.4 11.7 142 183-330 110-273 (318)
41 1tv5_A Dhodehase, dihydroorota 99.6 5.6E-15 1.9E-19 145.6 17.0 123 198-328 295-439 (443)
42 3bo9_A Putative nitroalkan dio 99.5 1E-13 3.6E-18 132.0 16.0 197 60-295 14-217 (326)
43 2gjl_A Hypothetical protein PA 99.5 8.2E-13 2.8E-17 125.7 18.9 106 188-297 108-215 (328)
44 2z6i_A Trans-2-enoyl-ACP reduc 99.5 9.3E-13 3.2E-17 125.6 17.3 183 65-290 8-198 (332)
45 3b0p_A TRNA-dihydrouridine syn 99.5 2E-12 7E-17 124.2 19.3 142 185-330 112-281 (350)
46 3bw2_A 2-nitropropane dioxygen 99.4 4.2E-12 1.4E-16 122.8 17.0 204 71-289 10-243 (369)
47 2uva_G Fatty acid synthase bet 99.2 3.9E-11 1.3E-15 136.4 13.0 214 48-292 558-804 (2060)
48 1y0e_A Putative N-acetylmannos 99.1 2.2E-09 7.5E-14 96.0 14.3 97 188-287 107-208 (223)
49 1mzh_A Deoxyribose-phosphate a 99.0 1.7E-09 5.7E-14 97.6 12.2 94 187-285 104-206 (225)
50 3gr7_A NADPH dehydrogenase; fl 99.0 2.2E-08 7.4E-13 95.7 19.1 101 186-288 196-312 (340)
51 1z41_A YQJM, probable NADH-dep 99.0 1.8E-08 6.2E-13 96.1 18.5 101 186-288 196-312 (338)
52 3igs_A N-acetylmannosamine-6-p 99.0 1E-08 3.6E-13 92.8 15.1 97 187-288 118-215 (232)
53 3q58_A N-acetylmannosamine-6-p 98.9 1.1E-08 3.9E-13 92.3 14.1 97 187-288 118-215 (229)
54 3ngj_A Deoxyribose-phosphate a 98.9 4.6E-09 1.6E-13 95.0 10.2 95 187-286 129-232 (239)
55 3hgj_A Chromate reductase; TIM 98.9 6.8E-08 2.3E-12 92.5 19.0 101 186-288 204-323 (349)
56 3oa3_A Aldolase; structural ge 98.9 1.8E-08 6.2E-13 93.2 12.7 97 187-285 160-265 (288)
57 3r12_A Deoxyribose-phosphate a 98.8 3.4E-08 1.2E-12 90.2 12.1 93 188-285 146-247 (260)
58 3l5l_A Xenobiotic reductase A; 98.8 1.8E-07 6.2E-12 90.1 16.7 101 186-288 210-330 (363)
59 1yxy_A Putative N-acetylmannos 98.7 7.1E-08 2.4E-12 86.9 11.7 97 187-288 120-220 (234)
60 3ndo_A Deoxyribose-phosphate a 98.7 9.3E-08 3.2E-12 86.1 11.9 95 187-285 114-221 (231)
61 1geq_A Tryptophan synthase alp 98.7 1.6E-07 5.6E-12 85.1 13.8 119 188-309 69-245 (248)
62 1wa3_A 2-keto-3-deoxy-6-phosph 98.7 6.6E-07 2.2E-11 78.8 17.2 92 186-288 92-183 (205)
63 2gou_A Oxidoreductase, FMN-bin 98.7 3.6E-07 1.2E-11 88.0 16.5 98 185-288 212-327 (365)
64 1wv2_A Thiazole moeity, thiazo 98.7 1.2E-07 4.2E-12 86.0 12.2 86 199-288 135-221 (265)
65 3tsm_A IGPS, indole-3-glycerol 98.7 2.9E-07 9.8E-12 85.0 14.9 88 198-289 168-255 (272)
66 3kru_A NADH:flavin oxidoreduct 98.7 6.9E-07 2.4E-11 85.3 17.7 100 185-288 194-312 (343)
67 2r14_A Morphinone reductase; H 98.7 3.2E-07 1.1E-11 88.7 15.5 99 186-288 218-333 (377)
68 2nv1_A Pyridoxal biosynthesis 98.7 2.9E-08 9.9E-13 93.3 7.9 120 198-326 124-275 (305)
69 2v82_A 2-dehydro-3-deoxy-6-pho 98.7 9.6E-07 3.3E-11 78.2 16.7 116 188-315 91-206 (212)
70 4adt_A Pyridoxine biosynthetic 98.7 2.8E-08 9.4E-13 93.0 6.7 118 191-317 116-266 (297)
71 2uv8_G Fatty acid synthase sub 98.7 1.1E-07 3.6E-12 108.1 12.6 194 63-289 584-808 (2051)
72 1qop_A Tryptophan synthase alp 98.6 1.2E-06 4.1E-11 80.8 17.5 69 241-311 194-264 (268)
73 1vyr_A Pentaerythritol tetrani 98.6 1.1E-06 3.8E-11 84.6 18.0 99 185-288 212-328 (364)
74 2hsa_B 12-oxophytodienoate red 98.6 1.1E-06 3.8E-11 85.6 17.8 101 185-288 222-353 (402)
75 3nav_A Tryptophan synthase alp 98.6 1.6E-06 5.6E-11 80.0 18.0 123 187-311 84-267 (271)
76 1icp_A OPR1, 12-oxophytodienoa 98.6 4.3E-07 1.5E-11 87.8 14.4 100 186-288 219-335 (376)
77 4e38_A Keto-hydroxyglutarate-a 98.6 3.2E-07 1.1E-11 82.7 12.6 177 93-287 27-206 (232)
78 3vnd_A TSA, tryptophan synthas 98.6 1.1E-06 3.8E-11 81.0 16.5 123 187-311 82-265 (267)
79 4ab4_A Xenobiotic reductase B; 98.6 1.2E-06 4E-11 84.3 16.4 92 186-288 205-313 (362)
80 3gka_A N-ethylmaleimide reduct 98.6 1.2E-06 4.2E-11 84.1 16.4 93 185-288 212-321 (361)
81 1ps9_A 2,4-dienoyl-COA reducta 98.6 3.2E-06 1.1E-10 87.4 20.3 100 187-288 194-315 (671)
82 1xm3_A Thiazole biosynthesis p 98.6 9E-07 3.1E-11 81.5 14.2 95 190-288 115-212 (264)
83 2zbt_A Pyridoxal biosynthesis 98.6 5E-08 1.7E-12 91.2 5.5 121 199-328 125-277 (297)
84 1yad_A Regulatory protein TENI 98.5 1.2E-06 4.1E-11 78.1 13.4 95 188-288 101-197 (221)
85 3l5a_A NADH/flavin oxidoreduct 98.5 4.8E-07 1.6E-11 88.6 10.4 100 188-288 225-351 (419)
86 2htm_A Thiazole biosynthesis p 98.5 9.4E-07 3.2E-11 80.4 10.8 79 207-288 132-212 (268)
87 3qja_A IGPS, indole-3-glycerol 98.4 1.1E-06 3.7E-11 81.3 11.2 90 196-289 159-248 (272)
88 3aty_A Tcoye, prostaglandin F2 98.4 3.8E-06 1.3E-10 81.2 15.3 96 186-288 229-341 (379)
89 2yw3_A 4-hydroxy-2-oxoglutarat 98.4 1.2E-06 4E-11 77.8 10.3 93 186-288 92-184 (207)
90 1vcv_A Probable deoxyribose-ph 98.4 5.8E-07 2E-11 80.7 7.9 172 108-284 15-221 (226)
91 1rd5_A Tryptophan synthase alp 98.4 1.3E-05 4.5E-10 73.3 16.4 120 190-312 135-260 (262)
92 3lab_A Putative KDPG (2-keto-3 98.3 3.6E-06 1.2E-10 74.9 11.6 164 106-287 21-191 (217)
93 2yzr_A Pyridoxal biosynthesis 98.3 4.8E-06 1.6E-10 78.2 12.8 45 242-288 230-276 (330)
94 1h5y_A HISF; histidine biosynt 98.3 3.6E-06 1.2E-10 75.7 11.4 74 210-288 157-232 (253)
95 2y88_A Phosphoribosyl isomeras 98.3 2.2E-06 7.4E-11 77.4 9.8 74 210-288 152-230 (244)
96 1vc4_A Indole-3-glycerol phosp 98.3 1.5E-06 5.2E-11 79.5 8.6 47 242-289 193-242 (254)
97 1ka9_F Imidazole glycerol phos 98.3 3.1E-06 1.1E-10 76.7 10.3 77 210-289 155-231 (252)
98 2tps_A Protein (thiamin phosph 98.3 5E-06 1.7E-10 74.0 11.1 95 191-288 107-205 (227)
99 1o94_A Tmadh, trimethylamine d 98.3 4.5E-06 1.6E-10 87.2 12.3 101 185-288 200-326 (729)
100 1vhc_A Putative KHG/KDPG aldol 98.3 8.5E-06 2.9E-10 73.1 12.4 163 107-288 26-190 (224)
101 3f4w_A Putative hexulose 6 pho 98.3 2.4E-06 8.3E-11 75.3 8.6 93 191-288 96-192 (211)
102 1vzw_A Phosphoribosyl isomeras 98.3 3.2E-06 1.1E-10 76.4 9.5 74 210-288 149-227 (244)
103 3o63_A Probable thiamine-phosp 98.3 5.5E-06 1.9E-10 75.3 11.0 81 207-288 142-224 (243)
104 1thf_D HISF protein; thermophI 98.2 3.6E-06 1.2E-10 76.3 9.5 74 210-288 154-229 (253)
105 3o07_A Pyridoxine biosynthesis 98.2 4.7E-06 1.6E-10 76.3 10.2 95 191-288 106-234 (291)
106 1wbh_A KHG/KDPG aldolase; lyas 98.2 1E-05 3.5E-10 72.1 12.2 89 190-288 100-189 (214)
107 4a29_A Engineered retro-aldol 98.2 1.4E-05 4.7E-10 72.6 13.0 103 187-289 92-239 (258)
108 1ub3_A Aldolase protein; schif 98.2 1.3E-05 4.5E-10 71.7 12.8 93 187-284 105-206 (220)
109 1qo2_A Molecule: N-((5-phospho 98.2 2.5E-06 8.4E-11 77.1 8.1 78 209-289 145-229 (241)
110 3zen_D Fatty acid synthase; tr 98.2 1.5E-06 5.1E-11 102.1 8.4 199 64-290 423-653 (3089)
111 2w6r_A Imidazole glycerol phos 98.2 3E-06 1E-10 77.4 8.1 77 210-289 159-235 (266)
112 1xi3_A Thiamine phosphate pyro 98.2 1.3E-05 4.5E-10 70.5 11.8 79 207-288 115-195 (215)
113 2qjg_A Putative aldolase MJ040 98.2 2.3E-05 7.7E-10 72.0 13.2 87 191-288 137-242 (273)
114 2ekc_A AQ_1548, tryptophan syn 98.2 3.1E-05 1.1E-09 71.0 14.1 47 242-291 196-242 (262)
115 2a4a_A Deoxyribose-phosphate a 98.1 4.3E-06 1.5E-10 77.2 8.0 89 188-278 144-249 (281)
116 1mxs_A KDPG aldolase; 2-keto-3 98.1 9.8E-06 3.4E-10 72.8 10.0 88 190-288 110-199 (225)
117 3ovp_A Ribulose-phosphate 3-ep 98.1 5.2E-05 1.8E-09 68.1 14.8 71 238-316 154-224 (228)
118 1jvn_A Glutamine, bifunctional 98.1 7.5E-06 2.6E-10 83.0 10.2 74 210-288 455-531 (555)
119 3k30_A Histamine dehydrogenase 98.1 3E-05 1E-09 80.4 14.5 101 185-288 208-329 (690)
120 1ujp_A Tryptophan synthase alp 98.1 1.8E-05 6.2E-10 73.0 10.6 116 188-313 80-253 (271)
121 3tdn_A FLR symmetric alpha-bet 98.0 1.2E-05 4.1E-10 72.8 8.8 77 209-288 37-113 (247)
122 1zfj_A Inosine monophosphate d 98.0 0.00017 5.8E-09 71.8 17.8 68 210-283 235-302 (491)
123 4gj1_A 1-(5-phosphoribosyl)-5- 98.0 5.6E-05 1.9E-09 68.6 12.4 102 186-289 62-230 (243)
124 3tdn_A FLR symmetric alpha-bet 97.9 1.4E-06 4.9E-11 79.0 0.0 75 211-288 160-234 (247)
125 1pii_A N-(5'phosphoribosyl)ant 97.9 2.3E-05 7.9E-10 77.2 8.5 115 197-325 155-269 (452)
126 2agk_A 1-(5-phosphoribosyl)-5- 97.9 1.7E-05 5.8E-10 72.7 6.9 74 211-286 162-239 (260)
127 1w8s_A FBP aldolase, fructose- 97.9 0.00018 6E-09 66.0 13.4 91 189-289 125-237 (263)
128 3inp_A D-ribulose-phosphate 3- 97.9 0.0002 6.7E-09 65.1 13.5 101 187-288 73-228 (246)
129 1qap_A Quinolinic acid phospho 97.9 0.00011 3.8E-09 68.5 11.9 86 189-286 197-283 (296)
130 2fli_A Ribulose-phosphate 3-ep 97.9 8E-05 2.7E-09 65.8 10.5 95 191-288 102-203 (220)
131 1n7k_A Deoxyribose-phosphate a 97.8 0.00012 4E-09 66.0 11.4 90 187-284 118-222 (234)
132 2b7n_A Probable nicotinate-nuc 97.8 4.6E-05 1.6E-09 70.3 8.7 88 188-287 169-261 (273)
133 3jr2_A Hexulose-6-phosphate sy 97.8 2.3E-05 7.9E-10 69.7 6.4 94 191-289 102-200 (218)
134 1i4n_A Indole-3-glycerol phosp 97.8 7.3E-05 2.5E-09 68.1 9.6 87 198-289 149-236 (251)
135 1thf_D HISF protein; thermophI 97.8 0.00016 5.5E-09 65.3 11.2 76 210-288 33-108 (253)
136 1ka9_F Imidazole glycerol phos 97.8 0.00016 5.3E-09 65.3 11.0 76 210-288 34-109 (252)
137 1p1x_A Deoxyribose-phosphate a 97.8 3.4E-05 1.2E-09 70.6 6.5 88 187-278 119-222 (260)
138 1h5y_A HISF; histidine biosynt 97.7 0.00033 1.1E-08 62.6 11.9 77 209-288 35-111 (253)
139 1h1y_A D-ribulose-5-phosphate 97.7 0.00057 2E-08 61.0 13.0 98 188-288 103-206 (228)
140 3vk5_A MOEO5; TIM barrel, tran 97.7 0.00014 4.7E-09 67.0 8.9 70 213-288 192-261 (286)
141 2jbm_A Nicotinate-nucleotide p 97.6 0.00024 8.3E-09 66.3 10.0 86 189-286 185-275 (299)
142 4a3u_A NCR, NADH\:flavin oxido 97.6 0.0013 4.3E-08 63.0 15.1 100 186-288 204-320 (358)
143 1rpx_A Protein (ribulose-phosp 97.6 0.00031 1.1E-08 62.6 10.2 47 241-288 163-212 (230)
144 1x1o_A Nicotinate-nucleotide p 97.6 0.00054 1.9E-08 63.5 11.9 86 190-287 185-272 (286)
145 2y88_A Phosphoribosyl isomeras 97.5 0.00042 1.4E-08 62.1 10.4 76 209-288 33-108 (244)
146 1wv2_A Thiazole moeity, thiazo 97.5 0.00031 1E-08 63.8 9.3 114 91-228 90-217 (265)
147 4eiv_A Deoxyribose-phosphate a 97.5 0.00048 1.6E-08 63.6 10.7 86 188-278 138-256 (297)
148 3tqv_A Nicotinate-nucleotide p 97.5 0.00045 1.5E-08 63.9 10.4 85 190-286 188-273 (287)
149 1tqj_A Ribulose-phosphate 3-ep 97.5 0.00023 7.8E-09 63.9 8.2 49 239-288 155-206 (230)
150 3glc_A Aldolase LSRF; TIM barr 97.5 0.0011 3.8E-08 61.7 12.9 88 189-289 158-263 (295)
151 3c2e_A Nicotinate-nucleotide p 97.5 9.2E-05 3.1E-09 69.0 5.6 86 189-286 187-280 (294)
152 3tjl_A NADPH dehydrogenase; OL 97.5 8.9E-05 3E-09 72.1 5.6 99 188-288 222-351 (407)
153 2w6r_A Imidazole glycerol phos 97.5 0.00017 5.9E-09 65.6 7.3 76 209-287 32-107 (266)
154 3s1x_A Probable transaldolase; 97.5 0.0014 4.8E-08 58.4 12.8 116 187-306 90-213 (223)
155 3ceu_A Thiamine phosphate pyro 97.5 0.00026 8.7E-09 62.6 7.9 80 207-288 95-177 (210)
156 2p10_A MLL9387 protein; putati 97.5 0.0013 4.5E-08 60.3 12.7 97 207-310 170-279 (286)
157 1vrd_A Inosine-5'-monophosphat 97.5 0.002 7E-08 64.0 15.3 68 210-283 239-306 (494)
158 1vzw_A Phosphoribosyl isomeras 97.5 0.0005 1.7E-08 61.8 9.8 75 210-288 35-109 (244)
159 3vzx_A Heptaprenylglyceryl pho 97.5 0.00081 2.8E-08 60.2 11.0 65 216-288 149-213 (228)
160 1qo2_A Molecule: N-((5-phospho 97.5 0.0001 3.6E-09 66.3 5.2 75 210-288 33-107 (241)
161 3paj_A Nicotinate-nucleotide p 97.4 0.0009 3.1E-08 62.7 11.4 86 189-286 220-306 (320)
162 3ctl_A D-allulose-6-phosphate 97.4 0.00099 3.4E-08 59.8 11.1 101 187-288 45-201 (231)
163 3r8r_A Transaldolase; pentose 97.4 0.0016 5.4E-08 57.6 11.9 115 187-305 88-210 (212)
164 2czd_A Orotidine 5'-phosphate 97.4 0.00048 1.6E-08 60.6 8.7 80 213-309 125-205 (208)
165 1jcn_A Inosine monophosphate d 97.3 0.0028 9.7E-08 63.3 14.5 68 210-283 257-324 (514)
166 2qr6_A IMP dehydrogenase/GMP r 97.3 0.0006 2.1E-08 65.9 8.8 96 185-284 142-240 (393)
167 3ajx_A 3-hexulose-6-phosphate 97.3 0.00094 3.2E-08 58.3 9.2 74 209-288 115-191 (207)
168 3l0g_A Nicotinate-nucleotide p 97.3 0.0013 4.4E-08 61.0 10.4 86 189-286 196-282 (300)
169 1o4u_A Type II quinolic acid p 97.3 0.00038 1.3E-08 64.5 6.7 87 189-287 181-272 (285)
170 3kts_A Glycerol uptake operon 97.3 0.00042 1.4E-08 60.4 6.3 89 189-289 92-185 (192)
171 3tha_A Tryptophan synthase alp 97.2 0.003 1E-07 57.4 12.2 109 191-302 133-246 (252)
172 3cwo_X Beta/alpha-barrel prote 97.2 0.0012 4.1E-08 57.8 9.1 74 210-288 133-208 (237)
173 1q6o_A Humps, 3-keto-L-gulonat 97.2 0.0019 6.4E-08 57.1 10.3 107 191-310 99-212 (216)
174 3gnn_A Nicotinate-nucleotide p 97.2 0.0014 4.6E-08 61.0 9.4 85 190-286 199-284 (298)
175 2f6u_A GGGPS, (S)-3-O-geranylg 97.2 0.001 3.5E-08 59.8 8.1 73 209-289 147-224 (234)
176 3exr_A RMPD (hexulose-6-phosph 97.1 0.00068 2.3E-08 60.5 6.7 97 208-311 122-218 (221)
177 1tqx_A D-ribulose-5-phosphate 97.1 0.0034 1.2E-07 56.2 11.3 113 189-310 102-222 (227)
178 3ve9_A Orotidine-5'-phosphate 97.1 0.0012 4E-08 58.7 7.4 86 211-314 119-205 (215)
179 1viz_A PCRB protein homolog; s 97.1 0.0014 4.8E-08 59.2 7.9 72 209-288 140-215 (240)
180 3nl6_A Thiamine biosynthetic b 97.0 0.005 1.7E-07 62.0 12.4 81 207-288 115-214 (540)
181 4e38_A Keto-hydroxyglutarate-a 97.0 0.0024 8.2E-08 57.3 8.7 81 187-282 72-153 (232)
182 1me8_A Inosine-5'-monophosphat 96.9 0.01 3.6E-07 59.1 14.0 70 210-284 244-313 (503)
183 1qpo_A Quinolinate acid phosph 96.9 0.0025 8.5E-08 59.0 8.7 86 189-286 183-272 (284)
184 3khj_A Inosine-5-monophosphate 96.9 0.0078 2.7E-07 57.5 12.0 88 189-283 85-173 (361)
185 3lab_A Putative KDPG (2-keto-3 96.9 0.003 1E-07 56.1 8.3 81 187-282 51-138 (217)
186 4dbe_A Orotidine 5'-phosphate 96.8 0.0039 1.3E-07 55.6 8.7 87 210-314 125-212 (222)
187 3qja_A IGPS, indole-3-glycerol 96.8 0.0098 3.4E-07 54.6 11.6 89 187-284 101-190 (272)
188 1vpx_A Protein (transaldolase 96.8 0.017 5.9E-07 51.6 12.6 118 187-307 99-223 (230)
189 2h6r_A Triosephosphate isomera 96.8 0.0039 1.3E-07 55.3 8.4 90 199-289 111-205 (219)
190 1hg3_A Triosephosphate isomera 96.8 0.011 3.8E-07 52.7 11.1 38 252-289 174-211 (225)
191 1to3_A Putative aldolase YIHT; 96.7 0.01 3.4E-07 55.4 10.9 92 192-289 148-260 (304)
192 1w0m_A TIM, triosephosphate is 96.6 0.012 4.1E-07 52.5 10.5 38 252-289 171-208 (226)
193 4gj1_A 1-(5-phosphoribosyl)-5- 96.6 0.0028 9.6E-08 57.2 6.3 75 210-287 34-108 (243)
194 1vhc_A Putative KHG/KDPG aldol 96.6 0.0094 3.2E-07 53.1 9.7 80 188-282 56-136 (224)
195 1wa3_A 2-keto-3-deoxy-6-phosph 96.6 0.0092 3.1E-07 51.8 9.3 79 190-283 51-131 (205)
196 1wbh_A KHG/KDPG aldolase; lyas 96.6 0.0089 3E-07 52.9 9.2 79 189-282 56-135 (214)
197 1l6w_A Fructose-6-phosphate al 96.5 0.029 1E-06 49.8 12.1 117 187-306 89-212 (220)
198 3q58_A N-acetylmannosamine-6-p 96.4 0.021 7.1E-07 51.1 10.4 87 187-282 57-155 (229)
199 1mxs_A KDPG aldolase; 2-keto-3 96.4 0.0081 2.8E-07 53.6 7.7 79 189-282 66-145 (225)
200 3iv3_A Tagatose 1,6-diphosphat 96.4 0.022 7.4E-07 53.7 10.9 105 213-327 194-317 (332)
201 3w01_A Heptaprenylglyceryl pho 96.4 0.011 3.7E-07 53.1 8.4 61 220-288 159-219 (235)
202 3igs_A N-acetylmannosamine-6-p 96.3 0.021 7.1E-07 51.1 10.2 87 187-282 57-155 (232)
203 1jvn_A Glutamine, bifunctional 96.3 0.0054 1.8E-07 62.0 6.7 76 211-288 284-372 (555)
204 1wx0_A Transaldolase; structur 96.3 0.025 8.5E-07 50.4 10.2 116 187-305 96-218 (223)
205 4fo4_A Inosine 5'-monophosphat 96.3 0.029 9.8E-07 53.7 11.2 88 190-283 87-177 (366)
206 4gbu_A NADPH dehydrogenase 1; 96.2 0.027 9.2E-07 54.5 11.2 40 247-288 313-353 (400)
207 1i4n_A Indole-3-glycerol phosp 96.2 0.031 1.1E-06 50.6 10.7 90 187-285 89-180 (251)
208 1vkf_A Glycerol uptake operon 96.1 0.0048 1.6E-07 53.4 4.7 85 190-289 94-183 (188)
209 3nvt_A 3-deoxy-D-arabino-heptu 96.1 0.33 1.1E-05 46.6 17.6 97 187-286 238-349 (385)
210 1y0e_A Putative N-acetylmannos 96.0 0.057 1.9E-06 47.3 11.1 94 188-286 45-149 (223)
211 3r2g_A Inosine 5'-monophosphat 95.8 0.048 1.6E-06 52.0 10.4 68 210-283 102-169 (361)
212 2agk_A 1-(5-phosphoribosyl)-5- 95.8 0.012 4.2E-07 53.5 6.0 68 210-288 41-108 (260)
213 2yw3_A 4-hydroxy-2-oxoglutarat 95.7 0.04 1.4E-06 48.3 8.8 78 189-282 53-130 (207)
214 1pii_A N-(5'phosphoribosyl)ant 95.6 0.1 3.4E-06 51.3 12.1 90 187-285 96-186 (452)
215 3m47_A Orotidine 5'-phosphate 95.6 0.018 6.2E-07 51.4 6.2 82 212-311 142-224 (228)
216 1vc4_A Indole-3-glycerol phosp 95.6 0.072 2.5E-06 48.2 10.2 72 210-287 68-139 (254)
217 3daq_A DHDPS, dihydrodipicolin 95.5 0.069 2.4E-06 49.3 10.0 92 213-307 29-125 (292)
218 3ih1_A Methylisocitrate lyase; 95.4 0.81 2.8E-05 42.5 17.1 89 190-290 149-250 (305)
219 3cpr_A Dihydrodipicolinate syn 95.4 0.11 3.8E-06 48.2 11.0 91 214-307 44-139 (304)
220 3o07_A Pyridoxine biosynthesis 95.3 0.036 1.2E-06 50.7 7.3 85 187-282 56-141 (291)
221 3cu2_A Ribulose-5-phosphate 3- 95.3 0.02 6.9E-07 51.5 5.6 79 209-288 137-222 (237)
222 1xm3_A Thiazole biosynthesis p 95.3 0.083 2.9E-06 48.0 9.9 42 187-228 166-208 (264)
223 1zco_A 2-dehydro-3-deoxyphosph 95.3 0.38 1.3E-05 43.7 14.2 97 187-286 119-230 (262)
224 3tak_A DHDPS, dihydrodipicolin 95.3 0.09 3.1E-06 48.5 10.2 91 214-307 29-124 (291)
225 1xky_A Dihydrodipicolinate syn 95.3 0.1 3.5E-06 48.4 10.4 90 214-306 40-134 (301)
226 3si9_A DHDPS, dihydrodipicolin 95.2 0.085 2.9E-06 49.3 9.7 91 214-307 50-145 (315)
227 3flu_A DHDPS, dihydrodipicolin 95.2 0.12 4E-06 47.9 10.5 91 214-307 35-130 (297)
228 3ru6_A Orotidine 5'-phosphate 95.2 0.039 1.3E-06 51.3 7.1 63 212-288 163-235 (303)
229 2wkj_A N-acetylneuraminate lya 95.2 0.11 3.8E-06 48.2 10.3 93 214-309 39-136 (303)
230 1f6k_A N-acetylneuraminate lya 95.1 0.11 3.7E-06 48.0 10.1 92 214-308 31-128 (293)
231 2v82_A 2-dehydro-3-deoxy-6-pho 95.1 0.083 2.8E-06 45.9 8.9 79 189-282 47-127 (212)
232 3tsm_A IGPS, indole-3-glycerol 95.1 0.14 4.7E-06 46.9 10.7 71 211-287 83-153 (272)
233 3tfx_A Orotidine 5'-phosphate 95.1 0.058 2E-06 49.1 8.1 79 212-310 149-237 (259)
234 3l21_A DHDPS, dihydrodipicolin 95.1 0.088 3E-06 48.9 9.5 89 214-305 43-136 (304)
235 1yxy_A Putative N-acetylmannos 95.0 0.15 5.2E-06 44.9 10.5 89 188-280 58-157 (234)
236 2pgw_A Muconate cycloisomerase 95.0 0.78 2.7E-05 43.6 16.3 89 188-286 178-274 (384)
237 3na8_A Putative dihydrodipicol 95.0 0.089 3E-06 49.2 9.2 91 214-307 52-147 (315)
238 3b4u_A Dihydrodipicolinate syn 95.0 0.1 3.5E-06 48.2 9.6 92 214-308 31-128 (294)
239 2yxg_A DHDPS, dihydrodipicolin 95.0 0.13 4.3E-06 47.4 10.2 92 213-307 27-123 (289)
240 2bdq_A Copper homeostasis prot 95.0 1.8 6E-05 38.3 18.1 96 186-284 104-208 (224)
241 3fkr_A L-2-keto-3-deoxyarabona 95.0 0.11 3.6E-06 48.5 9.7 94 214-307 36-134 (309)
242 2v9d_A YAGE; dihydrodipicolini 95.0 0.11 3.9E-06 49.1 9.9 91 213-306 58-153 (343)
243 3ldv_A Orotidine 5'-phosphate 95.0 0.073 2.5E-06 48.3 8.2 79 211-309 166-254 (255)
244 3qze_A DHDPS, dihydrodipicolin 94.9 0.11 3.9E-06 48.4 9.8 91 214-307 51-146 (314)
245 2ehh_A DHDPS, dihydrodipicolin 94.9 0.13 4.3E-06 47.6 10.0 92 213-307 27-123 (294)
246 2r8w_A AGR_C_1641P; APC7498, d 94.9 0.12 4.2E-06 48.5 10.0 92 213-307 61-157 (332)
247 2wqp_A Polysialic acid capsule 94.9 2.2 7.6E-05 40.2 18.5 126 187-318 137-273 (349)
248 1ypf_A GMP reductase; GUAC, pu 94.9 0.22 7.6E-06 46.8 11.6 88 189-283 85-177 (336)
249 4avf_A Inosine-5'-monophosphat 94.8 0.087 3E-06 52.3 9.1 68 210-283 231-298 (490)
250 2rfg_A Dihydrodipicolinate syn 94.8 0.12 4.1E-06 47.8 9.5 92 213-307 27-123 (297)
251 2ojp_A DHDPS, dihydrodipicolin 94.8 0.12 4.3E-06 47.5 9.6 89 214-305 29-122 (292)
252 3nav_A Tryptophan synthase alp 94.8 0.081 2.8E-06 48.4 8.2 40 188-227 197-237 (271)
253 1o5k_A DHDPS, dihydrodipicolin 94.8 0.11 3.9E-06 48.2 9.3 90 213-305 39-133 (306)
254 3tr2_A Orotidine 5'-phosphate 94.7 0.067 2.3E-06 48.1 7.3 80 211-310 148-237 (239)
255 3m5v_A DHDPS, dihydrodipicolin 94.7 0.16 5.5E-06 47.0 10.1 92 213-307 34-131 (301)
256 2vc6_A MOSA, dihydrodipicolina 94.7 0.11 3.7E-06 48.0 8.7 92 213-307 27-123 (292)
257 3qfe_A Putative dihydrodipicol 94.6 0.17 5.7E-06 47.4 10.1 92 214-306 39-135 (318)
258 4af0_A Inosine-5'-monophosphat 94.6 0.1 3.6E-06 52.0 9.0 231 41-283 60-350 (556)
259 4fxs_A Inosine-5'-monophosphat 94.6 0.11 3.7E-06 51.7 9.2 69 209-283 232-300 (496)
260 3kts_A Glycerol uptake operon 94.6 0.033 1.1E-06 48.4 4.7 43 187-229 138-181 (192)
261 3vnd_A TSA, tryptophan synthas 94.6 0.084 2.9E-06 48.2 7.6 40 188-227 195-235 (267)
262 3d0c_A Dihydrodipicolinate syn 94.6 0.099 3.4E-06 48.8 8.3 90 214-307 40-134 (314)
263 3s5o_A 4-hydroxy-2-oxoglutarat 94.5 0.17 5.7E-06 47.1 9.8 92 215-307 43-139 (307)
264 3ffs_A Inosine-5-monophosphate 94.5 0.087 3E-06 50.9 7.9 67 210-283 146-212 (400)
265 3e96_A Dihydrodipicolinate syn 94.5 0.091 3.1E-06 49.1 7.9 91 214-308 40-135 (316)
266 3h5d_A DHDPS, dihydrodipicolin 94.4 0.19 6.5E-06 46.8 9.8 90 213-305 34-129 (311)
267 3dz1_A Dihydrodipicolinate syn 94.2 0.26 8.8E-06 45.9 10.3 91 214-309 36-131 (313)
268 2yyu_A Orotidine 5'-phosphate 94.2 0.067 2.3E-06 48.1 6.1 75 216-310 152-236 (246)
269 1vr6_A Phospho-2-dehydro-3-deo 94.0 0.72 2.4E-05 43.6 12.9 129 187-318 202-347 (350)
270 1vli_A Spore coat polysacchari 93.8 1.2 4E-05 42.7 14.2 83 188-281 103-190 (385)
271 1rvk_A Isomerase/lactonizing e 93.8 0.76 2.6E-05 43.6 13.1 89 187-285 186-284 (382)
272 4dpp_A DHDPS 2, dihydrodipicol 93.8 0.21 7.2E-06 47.5 8.9 92 213-307 86-182 (360)
273 1xg4_A Probable methylisocitra 93.8 0.26 8.9E-06 45.6 9.3 89 190-289 139-241 (295)
274 2hmc_A AGR_L_411P, dihydrodipi 93.8 0.18 6.3E-06 47.6 8.5 89 214-307 54-147 (344)
275 3eb2_A Putative dihydrodipicol 93.8 0.097 3.3E-06 48.5 6.4 90 214-306 32-126 (300)
276 4aaj_A N-(5'-phosphoribosyl)an 93.7 0.58 2E-05 41.6 11.2 94 182-286 98-205 (228)
277 3a5f_A Dihydrodipicolinate syn 93.7 0.13 4.5E-06 47.4 7.1 76 214-289 29-109 (291)
278 3g8r_A Probable spore coat pol 93.6 5 0.00017 37.8 18.0 126 187-319 124-262 (350)
279 1vs1_A 3-deoxy-7-phosphoheptul 93.6 1.8 6.3E-05 39.4 14.5 97 187-286 134-245 (276)
280 1eix_A Orotidine 5'-monophosph 93.5 0.13 4.5E-06 46.1 6.7 59 216-288 158-226 (245)
281 1dbt_A Orotidine 5'-phosphate 93.5 0.11 3.9E-06 46.3 6.2 76 214-309 149-234 (239)
282 4adt_A Pyridoxine biosynthetic 93.3 0.29 1E-05 45.3 8.8 85 193-280 15-104 (297)
283 1ea0_A Glutamate synthase [NAD 93.3 0.67 2.3E-05 51.4 12.9 120 211-330 591-725 (1479)
284 3iwp_A Copper homeostasis prot 93.2 0.3 1E-05 44.8 8.5 69 208-283 47-131 (287)
285 2zbt_A Pyridoxal biosynthesis 93.0 0.35 1.2E-05 44.3 8.8 79 196-280 18-104 (297)
286 3usb_A Inosine-5'-monophosphat 93.0 0.31 1.1E-05 48.5 9.0 68 210-283 258-325 (511)
287 1qop_A Tryptophan synthase alp 92.8 0.5 1.7E-05 42.8 9.6 42 187-228 193-235 (268)
288 1eep_A Inosine 5'-monophosphat 92.8 0.32 1.1E-05 46.8 8.6 68 210-283 155-222 (404)
289 3iwp_A Copper homeostasis prot 92.7 0.66 2.3E-05 42.6 10.0 95 184-283 137-238 (287)
290 1s2w_A Phosphoenolpyruvate pho 92.6 0.65 2.2E-05 42.9 10.1 71 211-289 174-244 (295)
291 3ozy_A Putative mandelate race 92.6 0.88 3E-05 43.5 11.4 88 187-284 181-278 (389)
292 1nu5_A Chloromuconate cycloiso 92.6 1.7 5.9E-05 40.9 13.4 88 188-285 175-271 (370)
293 3hjz_A Transaldolase B; parach 92.5 0.42 1.4E-05 44.9 8.7 100 187-291 140-257 (334)
294 1twd_A Copper homeostasis prot 92.5 5.1 0.00017 36.0 15.4 92 186-283 101-198 (256)
295 1twd_A Copper homeostasis prot 92.4 0.63 2.1E-05 42.0 9.3 70 208-284 9-94 (256)
296 2nv1_A Pyridoxal biosynthesis 92.4 0.87 3E-05 41.9 10.7 87 187-281 9-105 (305)
297 3vk5_A MOEO5; TIM barrel, tran 92.1 0.24 8.2E-06 45.4 6.2 44 185-228 211-257 (286)
298 1mdl_A Mandelate racemase; iso 92.0 0.59 2E-05 44.0 9.3 89 187-285 175-272 (359)
299 2ovl_A Putative racemase; stru 92.0 0.64 2.2E-05 44.0 9.5 89 187-285 177-274 (371)
300 3rcy_A Mandelate racemase/muco 91.8 3.3 0.00011 40.1 14.5 89 187-285 189-286 (433)
301 2gjl_A Hypothetical protein PA 91.7 0.99 3.4E-05 41.9 10.3 80 189-282 57-144 (328)
302 2c6q_A GMP reductase 2; TIM ba 91.7 0.58 2E-05 44.3 8.7 67 211-283 121-189 (351)
303 1vqt_A Orotidine 5'-phosphate 91.5 0.16 5.5E-06 44.7 4.4 59 212-289 131-198 (213)
304 3eez_A Putative mandelate race 91.5 2.9 0.0001 39.6 13.6 86 188-286 176-270 (378)
305 3dg3_A Muconate cycloisomerase 91.5 2.7 9.3E-05 39.6 13.3 90 188-287 172-270 (367)
306 3ajx_A 3-hexulose-6-phosphate 91.4 2.8 9.5E-05 35.7 12.3 88 188-284 41-135 (207)
307 3vav_A 3-methyl-2-oxobutanoate 91.3 2.1 7.2E-05 39.0 11.7 97 185-283 15-126 (275)
308 2qgy_A Enolase from the enviro 91.2 0.95 3.2E-05 43.2 9.8 87 187-283 180-275 (391)
309 1nsj_A PRAI, phosphoribosyl an 91.0 0.53 1.8E-05 41.1 7.1 92 183-286 83-183 (205)
310 1ofd_A Ferredoxin-dependent gl 90.9 2.3 7.8E-05 47.4 13.5 120 211-330 585-732 (1520)
311 3f4w_A Putative hexulose 6 pho 90.9 3.4 0.00012 35.3 12.4 88 188-283 41-134 (211)
312 3pm6_A Putative fructose-bisph 90.9 3 0.0001 38.6 12.4 114 208-321 172-298 (306)
313 2oz8_A MLL7089 protein; struct 90.8 8.7 0.0003 36.4 16.2 87 187-283 176-273 (389)
314 3tha_A Tryptophan synthase alp 90.7 0.28 9.4E-06 44.4 5.2 39 189-228 189-228 (252)
315 3vzx_A Heptaprenylglyceryl pho 90.7 0.35 1.2E-05 43.0 5.7 41 187-228 167-209 (228)
316 2wqp_A Polysialic acid capsule 90.7 2.6 8.9E-05 39.8 12.0 83 189-282 94-180 (349)
317 2nql_A AGR_PAT_674P, isomerase 90.7 0.6 2.1E-05 44.5 7.9 91 184-285 192-291 (388)
318 2p8b_A Mandelate racemase/muco 90.5 1.1 3.8E-05 42.2 9.6 88 188-285 172-269 (369)
319 3jva_A Dipeptide epimerase; en 90.5 2.4 8.2E-05 39.8 11.8 88 188-285 170-266 (354)
320 2hzg_A Mandelate racemase/muco 90.4 1.3 4.4E-05 42.4 9.9 89 187-285 179-279 (401)
321 3zwt_A Dihydroorotate dehydrog 90.1 3.3 0.00011 39.2 12.4 41 187-227 284-327 (367)
322 2htm_A Thiazole biosynthesis p 90.1 0.91 3.1E-05 41.1 7.9 42 187-228 164-208 (268)
323 2og9_A Mandelate racemase/muco 90.0 1.2 4E-05 42.6 9.3 88 187-284 193-289 (393)
324 2r91_A 2-keto-3-deoxy-(6-phosp 90.0 1.8 6.3E-05 39.4 10.2 89 213-307 25-119 (286)
325 3w01_A Heptaprenylglyceryl pho 90.0 0.35 1.2E-05 43.2 5.1 41 187-228 173-215 (235)
326 3q94_A Fructose-bisphosphate a 89.9 2.5 8.6E-05 38.8 11.0 45 184-228 191-237 (288)
327 1viz_A PCRB protein homolog; s 89.9 0.37 1.3E-05 43.2 5.3 41 187-228 169-211 (240)
328 1gvf_A Tagatose-bisphosphate a 89.8 3.1 0.00011 38.1 11.5 46 183-228 186-233 (286)
329 3bo9_A Putative nitroalkan dio 89.6 1.6 5.6E-05 40.6 9.7 80 189-282 67-150 (326)
330 1zlp_A PSR132, petal death pro 89.5 1.8 6E-05 40.4 9.7 68 211-289 193-263 (318)
331 2z6i_A Trans-2-enoyl-ACP reduc 89.4 2.1 7E-05 39.9 10.3 80 189-282 53-136 (332)
332 2f6u_A GGGPS, (S)-3-O-geranylg 89.3 0.38 1.3E-05 43.0 4.8 40 187-227 177-218 (234)
333 3tkf_A Transaldolase; structur 89.2 1.7 6E-05 40.8 9.5 101 187-292 163-282 (345)
334 3q94_A Fructose-bisphosphate a 89.1 9.1 0.00031 35.0 14.0 107 208-319 159-285 (288)
335 3sz8_A 2-dehydro-3-deoxyphosph 89.0 2.2 7.4E-05 39.2 9.7 128 187-318 123-278 (285)
336 3i4k_A Muconate lactonizing en 89.0 2.7 9.1E-05 40.0 10.9 88 187-284 180-276 (383)
337 3o63_A Probable thiamine-phosp 88.9 0.75 2.6E-05 41.2 6.5 78 190-285 87-164 (243)
338 3fs2_A 2-dehydro-3-deoxyphosph 88.8 1.4 4.6E-05 40.8 8.3 95 187-286 144-263 (298)
339 4dwd_A Mandelate racemase/muco 88.8 1.9 6.6E-05 41.2 9.8 88 187-284 177-272 (393)
340 3m16_A Transaldolase; dimer, m 88.3 2 6.8E-05 40.2 9.2 100 187-291 144-261 (329)
341 1v5x_A PRA isomerase, phosphor 88.1 0.58 2E-05 40.8 5.1 91 183-286 82-177 (203)
342 3lye_A Oxaloacetate acetyl hyd 88.0 2.5 8.4E-05 39.2 9.5 68 212-289 183-253 (307)
343 3tml_A 2-dehydro-3-deoxyphosph 88.0 1.2 4.1E-05 41.0 7.3 95 187-286 120-245 (288)
344 2qdd_A Mandelate racemase/muco 88.0 4.5 0.00016 38.1 11.8 86 187-285 176-269 (378)
345 3toy_A Mandelate racemase/muco 87.9 5.5 0.00019 37.8 12.3 87 188-284 200-295 (383)
346 3cq0_A Putative transaldolase 87.9 3.4 0.00012 38.8 10.6 100 187-291 148-265 (339)
347 1gvf_A Tagatose-bisphosphate a 87.8 10 0.00035 34.6 13.5 107 208-319 155-281 (286)
348 3eoo_A Methylisocitrate lyase; 87.8 5.5 0.00019 36.7 11.8 92 190-284 13-119 (298)
349 2isw_A Putative fructose-1,6-b 87.8 10 0.00035 35.2 13.7 108 208-319 153-304 (323)
350 2ps2_A Putative mandelate race 87.7 2.7 9.2E-05 39.6 10.0 85 188-285 177-271 (371)
351 2rdx_A Mandelate racemase/muco 87.5 1.9 6.7E-05 40.8 8.9 85 187-284 175-268 (379)
352 3b0p_A TRNA-dihydrouridine syn 87.5 2.5 8.6E-05 39.7 9.5 42 185-227 182-225 (350)
353 3eoo_A Methylisocitrate lyase; 87.3 3.5 0.00012 38.0 10.2 68 211-289 175-245 (298)
354 2pp0_A L-talarate/galactarate 87.3 2.2 7.7E-05 40.7 9.2 88 187-284 206-302 (398)
355 2bdq_A Copper homeostasis prot 87.3 0.54 1.9E-05 41.6 4.4 70 208-284 9-97 (224)
356 3ugv_A Enolase; enzyme functio 87.2 5.4 0.00018 38.0 11.8 89 188-286 206-303 (390)
357 3stp_A Galactonate dehydratase 87.2 2.2 7.6E-05 41.1 9.1 90 187-286 216-314 (412)
358 1w3i_A EDA, 2-keto-3-deoxy glu 87.1 3.4 0.00011 37.8 9.9 89 213-307 26-120 (293)
359 2hjp_A Phosphonopyruvate hydro 87.1 2 7E-05 39.4 8.4 71 211-289 170-241 (290)
360 1gox_A (S)-2-hydroxy-acid oxid 87.0 5.1 0.00018 37.9 11.5 91 191-284 114-254 (370)
361 3q45_A Mandelate racemase/muco 87.0 4.8 0.00017 37.9 11.3 87 188-284 171-266 (368)
362 3tj4_A Mandelate racemase; eno 86.9 6.3 0.00022 37.2 12.0 86 188-283 184-278 (372)
363 1xg4_A Probable methylisocitra 86.8 3.7 0.00013 37.8 10.0 91 190-283 8-114 (295)
364 2ze3_A DFA0005; organic waste 86.8 3.5 0.00012 37.5 9.7 64 212-289 173-238 (275)
365 2hjp_A Phosphonopyruvate hydro 86.8 8.3 0.00028 35.3 12.3 92 191-283 7-110 (290)
366 1s2w_A Phosphoenolpyruvate pho 86.7 3.3 0.00011 38.1 9.6 91 190-283 10-114 (295)
367 1rd5_A Tryptophan synthase alp 86.5 0.94 3.2E-05 40.6 5.7 42 187-228 189-231 (262)
368 3mqt_A Mandelate racemase/muco 86.4 1.5 5.2E-05 41.9 7.4 87 188-284 187-283 (394)
369 2gl5_A Putative dehydratase pr 86.4 2.2 7.5E-05 40.8 8.6 87 187-283 204-299 (410)
370 3jr2_A Hexulose-6-phosphate sy 86.3 7.5 0.00025 33.6 11.4 87 188-283 47-139 (218)
371 3r0u_A Enzyme of enolase super 86.3 14 0.00047 35.0 14.1 89 188-286 173-272 (379)
372 3ro6_B Putative chloromuconate 86.1 2.9 9.9E-05 39.3 9.2 89 188-286 171-269 (356)
373 3go2_A Putative L-alanine-DL-g 86.1 2.1 7.3E-05 41.1 8.3 87 187-285 199-294 (409)
374 2qde_A Mandelate racemase/muco 86.0 2.8 9.6E-05 39.9 9.1 88 187-284 175-271 (397)
375 1tkk_A Similar to chloromucona 85.9 4.7 0.00016 37.8 10.6 89 187-285 171-270 (366)
376 3b8i_A PA4872 oxaloacetate dec 85.9 3.5 0.00012 37.7 9.3 92 191-283 13-117 (287)
377 2nuw_A 2-keto-3-deoxygluconate 85.9 3.6 0.00012 37.5 9.5 89 213-307 26-120 (288)
378 4e5t_A Mandelate racemase / mu 85.5 2.1 7.2E-05 41.1 7.9 88 187-284 194-290 (404)
379 3mkc_A Racemase; metabolic pro 85.4 2 6.8E-05 41.1 7.7 87 188-284 192-288 (394)
380 2hxt_A L-fuconate dehydratase; 85.4 4.8 0.00016 38.9 10.6 88 187-283 228-324 (441)
381 3mwc_A Mandelate racemase/muco 85.4 12 0.00041 35.7 13.2 83 187-277 243-329 (400)
382 2o56_A Putative mandelate race 85.3 2.4 8.3E-05 40.5 8.3 87 187-283 201-296 (407)
383 3vcn_A Mannonate dehydratase; 85.2 2 6.8E-05 41.6 7.7 88 187-284 213-309 (425)
384 3ih1_A Methylisocitrate lyase; 85.2 6.6 0.00023 36.3 10.8 91 190-284 20-125 (305)
385 4a29_A Engineered retro-aldol 85.2 3 0.0001 37.6 8.2 72 209-286 65-136 (258)
386 1sjd_A N-acylamino acid racema 85.1 24 0.00083 32.8 15.1 84 185-274 219-304 (368)
387 1o66_A 3-methyl-2-oxobutanoate 84.8 13 0.00043 33.8 12.3 95 187-283 5-115 (275)
388 2poz_A Putative dehydratase; o 84.8 2.3 7.8E-05 40.5 7.8 87 187-283 185-280 (392)
389 1xi3_A Thiamine phosphate pyro 84.8 0.74 2.5E-05 39.6 4.0 44 185-228 148-191 (215)
390 1zlp_A PSR132, petal death pro 84.8 17 0.00059 33.7 13.5 91 191-283 31-136 (318)
391 2ox4_A Putative mandelate race 84.4 2.2 7.6E-05 40.7 7.6 88 187-284 195-291 (403)
392 1yad_A Regulatory protein TENI 84.4 0.97 3.3E-05 39.3 4.6 44 185-228 150-193 (221)
393 3fok_A Uncharacterized protein 84.3 1.5 5.1E-05 40.6 5.9 79 196-288 173-278 (307)
394 3fa4_A 2,3-dimethylmalate lyas 84.3 4.6 0.00016 37.3 9.3 67 213-289 176-245 (302)
395 1rvg_A Fructose-1,6-bisphospha 84.3 9.8 0.00033 35.1 11.5 45 183-227 186-253 (305)
396 3n9r_A Fructose-bisphosphate a 84.0 23 0.00078 32.6 13.9 110 208-319 155-304 (307)
397 1m3u_A 3-methyl-2-oxobutanoate 83.7 12 0.0004 33.9 11.5 95 187-283 5-114 (264)
398 3gd6_A Muconate cycloisomerase 83.7 9.9 0.00034 36.1 11.8 126 96-282 108-267 (391)
399 1o60_A 2-dehydro-3-deoxyphosph 83.7 3.6 0.00012 37.8 8.3 97 187-286 121-242 (292)
400 3ctl_A D-allulose-6-phosphate 83.5 4.7 0.00016 35.6 8.7 41 187-227 150-195 (231)
401 3fa4_A 2,3-dimethylmalate lyas 83.4 9.7 0.00033 35.1 11.1 95 190-284 8-116 (302)
402 2gdq_A YITF; mandelate racemas 83.4 2.8 9.7E-05 39.7 7.8 87 187-283 170-266 (382)
403 3lye_A Oxaloacetate acetyl hyd 83.3 8.5 0.00029 35.5 10.7 96 189-284 14-124 (307)
404 3v3w_A Starvation sensing prot 83.3 2.2 7.7E-05 41.2 7.1 88 187-284 212-308 (424)
405 3sgz_A Hydroxyacid oxidase 2; 83.3 7.4 0.00025 36.7 10.4 91 191-284 112-246 (352)
406 1vkf_A Glycerol uptake operon 83.3 0.72 2.5E-05 39.7 3.1 36 189-228 142-178 (188)
407 2tps_A Protein (thiamin phosph 83.2 0.87 3E-05 39.5 3.8 44 185-228 157-201 (227)
408 1n8f_A DAHP synthetase; (beta/ 83.1 6.6 0.00023 36.9 9.9 119 190-310 171-346 (350)
409 2yzr_A Pyridoxal biosynthesis 83.0 5.9 0.0002 36.9 9.4 83 194-282 12-102 (330)
410 3dip_A Enolase; structural gen 83.0 5.5 0.00019 38.2 9.7 88 187-283 199-295 (410)
411 4e4u_A Mandalate racemase/muco 82.9 3 0.0001 40.1 7.8 88 187-284 187-283 (412)
412 3qw3_A Orotidine-5-phosphate d 82.9 2.7 9.4E-05 37.8 7.0 78 218-313 168-252 (255)
413 3g8r_A Probable spore coat pol 82.9 7.4 0.00025 36.6 10.2 81 190-281 82-166 (350)
414 3r4e_A Mandelate racemase/muco 82.8 2 6.7E-05 41.5 6.4 87 188-284 207-302 (418)
415 3rr1_A GALD, putative D-galact 82.8 2.7 9.3E-05 40.3 7.4 88 187-284 164-260 (405)
416 2qkf_A 3-deoxy-D-manno-octulos 82.6 5.3 0.00018 36.4 8.9 118 187-307 118-266 (280)
417 1tzz_A Hypothetical protein L1 82.5 3.2 0.00011 39.5 7.8 87 187-283 196-295 (392)
418 2qq6_A Mandelate racemase/muco 82.5 4.1 0.00014 38.9 8.6 87 187-283 196-291 (410)
419 1h1y_A D-ribulose-5-phosphate 82.4 2.2 7.4E-05 37.4 6.1 90 187-285 52-147 (228)
420 1rvg_A Fructose-1,6-bisphospha 82.3 31 0.001 31.8 14.5 109 208-319 153-302 (305)
421 2i1o_A Nicotinate phosphoribos 82.1 7.4 0.00025 37.3 10.1 94 188-287 197-302 (398)
422 3tji_A Mandelate racemase/muco 81.8 3.2 0.00011 40.1 7.5 87 188-284 209-304 (422)
423 3ddm_A Putative mandelate race 81.8 4.7 0.00016 38.4 8.7 87 187-283 185-281 (392)
424 2e1d_A Transaldolase; pentose 81.8 6.6 0.00022 36.7 9.4 100 187-291 143-261 (331)
425 3sbf_A Mandelate racemase / mu 81.5 2.8 9.6E-05 40.1 7.0 89 187-285 187-284 (401)
426 2pcq_A Putative dihydrodipicol 81.4 4 0.00014 37.1 7.7 88 214-307 26-117 (283)
427 1geq_A Tryptophan synthase alp 81.2 1.9 6.4E-05 38.0 5.3 41 187-227 179-220 (248)
428 2nli_A Lactate oxidase; flavoe 81.1 6.9 0.00024 37.0 9.5 90 192-284 124-258 (368)
429 3inp_A D-ribulose-phosphate 3- 81.1 3.1 0.00011 37.2 6.7 41 187-227 178-223 (246)
430 4gbu_A NADPH dehydrogenase 1; 80.9 39 0.0013 32.1 16.6 63 184-258 160-242 (400)
431 1ujp_A Tryptophan synthase alp 80.7 1.9 6.5E-05 39.1 5.2 40 187-228 190-230 (271)
432 1chr_A Chloromuconate cycloiso 80.6 5.1 0.00017 37.7 8.4 88 187-284 174-270 (370)
433 3qld_A Mandelate racemase/muco 80.5 21 0.00072 33.8 12.8 154 108-275 149-312 (388)
434 1p0k_A Isopentenyl-diphosphate 80.4 15 0.0005 34.2 11.4 84 198-283 115-209 (349)
435 2vc6_A MOSA, dihydrodipicolina 80.0 34 0.0012 30.9 17.5 83 190-286 117-208 (292)
436 3bjs_A Mandelate racemase/muco 79.8 3.5 0.00012 39.8 7.0 87 187-283 215-311 (428)
437 1r0m_A N-acylamino acid racema 79.5 40 0.0014 31.4 14.7 86 185-276 225-312 (375)
438 3sjn_A Mandelate racemase/muco 79.5 4.1 0.00014 38.5 7.3 88 187-284 179-276 (374)
439 3mwc_A Mandelate racemase/muco 79.2 12 0.00039 35.8 10.5 91 185-285 189-287 (400)
440 3ceu_A Thiamine phosphate pyro 79.1 1.9 6.5E-05 37.3 4.5 44 185-228 128-173 (210)
441 3t6c_A RSPA, putative MAND fam 78.8 5.6 0.00019 38.6 8.2 88 188-285 227-323 (440)
442 3my9_A Muconate cycloisomerase 78.8 6.6 0.00023 37.1 8.5 88 188-285 178-274 (377)
443 1sjd_A N-acylamino acid racema 78.7 7.3 0.00025 36.5 8.8 89 185-283 167-263 (368)
444 2nwr_A 2-dehydro-3-deoxyphosph 78.7 4.2 0.00014 36.8 6.8 95 187-287 107-226 (267)
445 3i4k_A Muconate lactonizing en 78.7 22 0.00075 33.5 12.2 84 185-274 231-316 (383)
446 3sr7_A Isopentenyl-diphosphate 78.7 3.7 0.00013 39.0 6.6 82 199-283 144-237 (365)
447 2ze3_A DFA0005; organic waste 78.7 26 0.0009 31.6 12.2 88 191-283 10-112 (275)
448 3vkj_A Isopentenyl-diphosphate 78.6 23 0.00078 33.4 12.2 87 194-283 113-218 (368)
449 2cu0_A Inosine-5'-monophosphat 78.4 2.8 9.5E-05 41.2 5.9 65 210-283 230-294 (486)
450 3bw2_A 2-nitropropane dioxygen 78.2 2.8 9.4E-05 39.6 5.7 42 187-228 196-238 (369)
451 4dxk_A Mandelate racemase / mu 78.0 5 0.00017 38.3 7.5 88 187-284 196-292 (400)
452 2isw_A Putative fructose-1,6-b 77.8 15 0.00051 34.2 10.3 42 186-227 191-255 (323)
453 4aaj_A N-(5'-phosphoribosyl)an 77.8 18 0.0006 31.8 10.4 77 201-283 20-99 (228)
454 1f8m_A Isocitrate lyase, ICL; 77.7 9 0.00031 37.1 9.1 87 199-285 64-185 (429)
455 2qiw_A PEP phosphonomutase; st 77.6 15 0.0005 32.9 10.0 90 191-283 12-113 (255)
456 2fli_A Ribulose-phosphate 3-ep 77.5 6.3 0.00021 33.8 7.4 70 210-284 19-92 (220)
457 3eol_A Isocitrate lyase; seatt 77.4 9 0.00031 37.1 9.0 87 199-285 60-182 (433)
458 3cwn_A Transaldolase B; direct 77.2 21 0.00072 33.3 11.3 100 187-291 156-273 (337)
459 1jub_A Dihydroorotate dehydrog 76.9 2.7 9.1E-05 38.5 5.0 41 187-227 228-271 (311)
460 3b8i_A PA4872 oxaloacetate dec 76.8 4.9 0.00017 36.8 6.7 68 211-289 172-240 (287)
461 2zc8_A N-acylamino acid racema 76.7 46 0.0016 30.8 13.8 84 185-276 218-305 (369)
462 2ekc_A AQ_1548, tryptophan syn 76.0 3.7 0.00013 36.9 5.6 40 188-228 195-235 (262)
463 3gr7_A NADPH dehydrogenase; fl 75.7 4.6 0.00016 37.8 6.4 41 186-226 264-306 (340)
464 1ep3_A Dihydroorotate dehydrog 75.6 2.9 9.8E-05 38.1 4.8 40 188-227 230-270 (311)
465 1tqj_A Ribulose-phosphate 3-ep 75.6 2 6.7E-05 37.9 3.6 42 187-228 156-202 (230)
466 1rpx_A Protein (ribulose-phosp 75.4 2.1 7.3E-05 37.3 3.8 41 188-228 163-208 (230)
467 3n9r_A Fructose-bisphosphate a 75.3 18 0.00062 33.3 10.1 44 184-227 189-255 (307)
468 1z41_A YQJM, probable NADH-dep 75.2 3.5 0.00012 38.5 5.4 42 186-227 264-307 (338)
469 1r0m_A N-acylamino acid racema 74.5 11 0.00038 35.3 8.8 89 185-283 174-269 (375)
470 2e6f_A Dihydroorotate dehydrog 74.3 3.3 0.00011 37.9 4.9 41 187-227 231-273 (314)
471 2zc8_A N-acylamino acid racema 74.2 12 0.00042 34.9 9.0 89 185-283 167-262 (369)
472 3r8r_A Transaldolase; pentose 74.1 29 0.00098 30.2 10.6 111 188-317 41-156 (212)
473 2p10_A MLL9387 protein; putati 74.0 9.5 0.00032 34.8 7.7 94 190-285 16-129 (286)
474 2zad_A Muconate cycloisomerase 73.8 26 0.00089 32.3 11.1 85 188-282 170-264 (345)
475 3noy_A 4-hydroxy-3-methylbut-2 73.4 13 0.00044 35.1 8.6 66 209-284 48-113 (366)
476 1nvm_A HOA, 4-hydroxy-2-oxoval 73.1 12 0.00042 34.8 8.7 75 211-286 34-116 (345)
477 1f76_A Dihydroorotate dehydrog 72.9 4.5 0.00015 37.5 5.5 41 187-227 275-318 (336)
478 3heb_A Response regulator rece 72.6 31 0.0011 26.7 11.1 91 190-286 19-120 (152)
479 1tx2_A DHPS, dihydropteroate s 72.2 12 0.0004 34.4 8.0 70 212-285 68-144 (297)
480 3s1x_A Probable transaldolase; 71.9 30 0.001 30.3 10.2 87 188-285 43-136 (223)
481 1tqx_A D-ribulose-5-phosphate 71.9 6.1 0.00021 34.8 5.8 42 187-228 160-202 (227)
482 1wuf_A Hypothetical protein LI 71.8 55 0.0019 30.7 13.1 84 186-275 239-324 (393)
483 2rdx_A Mandelate racemase/muco 71.7 16 0.00055 34.3 9.2 84 187-276 225-310 (379)
484 1kbi_A Cytochrome B2, L-LCR; f 71.5 23 0.00079 35.0 10.5 41 240-283 331-371 (511)
485 4e4f_A Mannonate dehydratase; 71.3 4.7 0.00016 38.9 5.4 87 188-284 215-310 (426)
486 2yxg_A DHDPS, dihydrodipicolin 71.3 54 0.0018 29.5 12.4 38 191-228 59-103 (289)
487 1gte_A Dihydropyrimidine dehyd 71.3 30 0.001 37.1 12.1 91 190-282 624-734 (1025)
488 3qz6_A HPCH/HPAI aldolase; str 71.3 8.6 0.00029 34.5 6.8 74 203-284 20-96 (261)
489 3m5v_A DHDPS, dihydrodipicolin 71.2 60 0.0021 29.4 19.1 82 189-285 124-214 (301)
490 1vli_A Spore coat polysacchari 71.1 26 0.00088 33.4 10.3 122 187-313 147-280 (385)
491 3oix_A Putative dihydroorotate 71.0 4.5 0.00015 38.0 5.0 41 187-227 261-304 (345)
492 3flu_A DHDPS, dihydrodipicolin 71.0 60 0.0021 29.3 18.2 84 189-286 123-214 (297)
493 2gou_A Oxidoreductase, FMN-bin 70.9 5.8 0.0002 37.4 5.9 41 186-226 280-321 (365)
494 1v5x_A PRA isomerase, phosphor 70.8 39 0.0013 28.9 10.7 78 203-283 2-82 (203)
495 3to5_A CHEY homolog; alpha(5)b 70.7 37 0.0013 26.8 10.4 91 189-286 26-118 (134)
496 3qw4_B UMP synthase; N-termina 70.6 3.9 0.00013 39.9 4.7 60 218-289 169-235 (453)
497 2h6r_A Triosephosphate isomera 70.6 5.9 0.0002 34.5 5.4 93 188-288 42-143 (219)
498 1vyr_A Pentaerythritol tetrani 70.5 5.9 0.0002 37.4 5.8 41 186-226 281-322 (364)
499 3tcs_A Racemase, putative; PSI 70.3 27 0.00091 33.1 10.4 88 188-285 186-282 (388)
500 3r4e_A Mandelate racemase/muco 70.2 16 0.00055 35.0 8.9 85 186-276 258-345 (418)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=2.7e-71 Score=531.18 Aligned_cols=320 Identities=46% Similarity=0.724 Sum_probs=293.3
Q ss_pred CCChHHHHHHHHHhCCccchhhhcCccccchHHHHhHhcccccceeecccCCCCCCCcceeecccccccceeeccccccc
Q 019244 4 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQK 83 (344)
Q Consensus 4 ~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iapm~~~~ 83 (344)
++|++|||+.||++||+++|+|++||++||.|+++|+.+|++|+|+||+|++++++||+|+|||+++++||+|||+|+++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHcCCcc---------------------------ccCCHHHHHHHHHHHHHcCCcEEEeccCCccc
Q 019244 84 MAHPEGEYATARAASAAGTIM---------------------------VYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 136 (344)
Q Consensus 84 ~~~~~~~~~lA~aA~~~g~~~---------------------------~~~d~~~~~~~i~~a~~ag~~~l~~tvd~~~~ 136 (344)
+.||++|.++|+||+++|+++ +++|++.++++++||+++||+++++|+|+|.+
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 999999999999999999999 46899999999999999999999999999999
Q ss_pred cccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCHHHHHHH
Q 019244 137 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDARIA 216 (344)
Q Consensus 137 g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~ 216 (344)
|+|++|+|++|.+|..++.+++..... .. ..........++.++|+.|+++++.+++||++|++.++++|+.+
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~~~~~----~~---~~~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a 234 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALRALKE----EK---PTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELA 234 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC----------------------CCCTTCCHHHHHHHHHHCCSCEEEEEECSHHHHHHH
T ss_pred CcchhhhhcCCCCCcccchhhhccccc----cc---ccchhhhhccCCCCCHHHHHHHHHhcCCCEEEEecCcHHHHHHH
Confidence 999999999998887666665532110 00 00111113467889999999999999999999999999999999
Q ss_pred HHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChH
Q 019244 217 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 296 (344)
Q Consensus 217 ~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~ 296 (344)
.++|+|+|+|+||||+++++++++++.|+++++.+++++|||++|||+++.|++|+|++||++|++||+|+|++++.|++
T Consensus 235 ~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~ 314 (352)
T 3sgz_A 235 MKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGED 314 (352)
T ss_dssp HHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcH
Confidence 99999999999999999999999999999999988778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHhhhccccee
Q 019244 297 GVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 330 (344)
Q Consensus 297 ~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~ 330 (344)
++.++++.+++||+.+|.++|+++++||+++.++
T Consensus 315 gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~ 348 (352)
T 3sgz_A 315 GVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQ 348 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhcch
Confidence 9999999999999999999999999999988774
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=1.1e-64 Score=495.06 Aligned_cols=330 Identities=56% Similarity=0.914 Sum_probs=294.4
Q ss_pred CCCChHHHHHHHHHhCCccchhhhcCccccchHHHHhHhcccccceeecccCCCCCCCcceeecccccccceeecccccc
Q 019244 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (344)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iapm~~~ 82 (344)
.++|++|||+.||++||+.+|+|++||+++|.|+++|+.+|++|+|+||+|++++++||+|+|||+++++||+|||||++
T Consensus 26 ~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~~ 105 (392)
T 2nzl_A 26 RLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQ 105 (392)
T ss_dssp CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEecccccc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCcc---------------------------ccCCHHHHHHHHHHHHHcCCcEEEeccCCcc
Q 019244 83 KMAHPEGEYATARAASAAGTIM---------------------------VYKDRNVVAQLVRRAERAGFKAIALTVDTPR 135 (344)
Q Consensus 83 ~~~~~~~~~~lA~aA~~~g~~~---------------------------~~~d~~~~~~~i~~a~~ag~~~l~~tvd~~~ 135 (344)
.+.|+++|.++|++|+++|+++ +++|++...+++++++++|++++++|+|+|.
T Consensus 106 ~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~ 185 (392)
T 2nzl_A 106 RMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPY 185 (392)
T ss_dssp GGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSS
T ss_pred ccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 9999999999999999999999 2368889999999999999999999999999
Q ss_pred ccccHHHHHhhcCCCCcccccccccccc--ccccc-ccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCHHH
Q 019244 136 LGRREADIKNRFTLPPFLTLKNFQGLDL--GKMDE-ANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED 212 (344)
Q Consensus 136 ~g~r~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~~ 212 (344)
.|+|++|++++|.+|..++.+++..... ..... ........++..+.+++++|+.|+++++.+++||++|++.++++
T Consensus 186 ~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e~ 265 (392)
T 2nzl_A 186 LGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDD 265 (392)
T ss_dssp CCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECCHHH
T ss_pred ccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCCHHH
Confidence 9999999999998887765555421100 00000 00011235666667888999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhh
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 292 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~ 292 (344)
|+.+.++|+|+|+|+||||++.++++++++.|+++++.+++++|||++|||+++.|++|+|++|||+|++||||++++++
T Consensus 266 A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~ 345 (392)
T 2nzl_A 266 AREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAF 345 (392)
T ss_dssp HHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHh
Confidence 99999999999999999999999999999999999998876899999999999999999999999999999999999988
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceeec
Q 019244 293 EGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 332 (344)
Q Consensus 293 ~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~ 332 (344)
.|++++.++++.+++||+.+|.++|+++++||++..+...
T Consensus 346 ~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~ 385 (392)
T 2nzl_A 346 QGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKN 385 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBC--
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhC
Confidence 8999999999999999999999999999999999888653
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=3.9e-64 Score=487.81 Aligned_cols=326 Identities=35% Similarity=0.553 Sum_probs=282.0
Q ss_pred CCCCChHHHHHHHHHhCCccchhhhcCccccchHHHHhHhcccccceeecccCCCCCCCcceeecccccccceeeccccc
Q 019244 2 GEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAM 81 (344)
Q Consensus 2 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iapm~~ 81 (344)
..++|++|||+.||++||+.+|+|+.||+++|.|+++|+.+|++|+|+||+|++++++||+|+|||+++++||+||||++
T Consensus 11 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma~ 90 (368)
T 2nli_A 11 IDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIAA 90 (368)
T ss_dssp CCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCSC
T ss_pred ccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchhh
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHHHHHcCCcc---------------------------ccCCHHHHHHHHHHHHHcCCcEEEeccCCc
Q 019244 82 QKMAHPEGEYATARAASAAGTIM---------------------------VYKDRNVVAQLVRRAERAGFKAIALTVDTP 134 (344)
Q Consensus 82 ~~~~~~~~~~~lA~aA~~~g~~~---------------------------~~~d~~~~~~~i~~a~~ag~~~l~~tvd~~ 134 (344)
+++.|++++.++|++|+++|+++ +++|++...+++++++++|++++++|+|+|
T Consensus 91 ~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p 170 (368)
T 2nli_A 91 HGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADST 170 (368)
T ss_dssp GGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC
T ss_pred ccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 99999999999999999999998 136888899999999999999999999999
Q ss_pred cccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCHHHHH
Q 019244 135 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDAR 214 (344)
Q Consensus 135 ~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~~a~ 214 (344)
..|+|++|++++|.+| +...++..... . . .....+ .+++++.+++++|+.|+++++.+++||++|++.++++++
T Consensus 171 ~~g~r~~d~~~~~~~p--~~~~~~~~~~~-~-~-~~g~~l-~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a~ 244 (368)
T 2nli_A 171 VSGNRDRDVKNKFVYP--FGMPIVQRYLR-G-T-AEGMSL-NNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDAD 244 (368)
T ss_dssp ---CBC--------CC--SCCHHHHHHHT-T-S-GGGC------CTTBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHHH
T ss_pred cccchhHHHhhcccCc--chhhhhhcccc-c-C-CCCchH-HhhhhccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHHH
Confidence 9999999999998777 22223210000 0 0 000111 344555678889999999999999999999999999999
Q ss_pred HHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcC
Q 019244 215 IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG 294 (344)
Q Consensus 215 ~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G 294 (344)
.+.++|+|+|+|+||||+++++++++++.++++++.+++++|||++|||+++.|++|+|++|||+|++||||++++++.|
T Consensus 245 ~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G 324 (368)
T 2nli_A 245 MAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGG 324 (368)
T ss_dssp HHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcC
Confidence 99999999999999999999999999999999999887689999999999999999999999999999999999998889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceeecc
Q 019244 295 EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEW 333 (344)
Q Consensus 295 ~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 333 (344)
++|+.++++.+++||+.+|.++|++++.+|++..+....
T Consensus 325 ~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 363 (368)
T 2nli_A 325 WQGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLFDNP 363 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHTCCEEECT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccccEeecc
Confidence 999999999999999999999999999999999887654
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=6.4e-63 Score=480.26 Aligned_cols=342 Identities=88% Similarity=1.323 Sum_probs=299.9
Q ss_pred CCCChHHHHHHHHHhCCccchhhhcCccccchHHHHhHhcccccceeecccCCCCCCCcceeecccccccceeecccccc
Q 019244 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (344)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iapm~~~ 82 (344)
+++|++|||+.||++||+.+|+|++||+++|.|+++|+.+|++|+|+||+|++++++||+|+|||+++++||+|||||++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCcc--------------------------ccCCHHHHHHHHHHHHHcCCcEEEeccCCccc
Q 019244 83 KMAHPEGEYATARAASAAGTIM--------------------------VYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 136 (344)
Q Consensus 83 ~~~~~~~~~~lA~aA~~~g~~~--------------------------~~~d~~~~~~~i~~a~~ag~~~l~~tvd~~~~ 136 (344)
.+.|+++|.++|++|+++|+++ +.+|++...+++++++++|++++.+|+|+|..
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 9999999999999999999998 24688888899999999999999999999999
Q ss_pred cccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCHHHHHHH
Q 019244 137 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDARIA 216 (344)
Q Consensus 137 g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~ 216 (344)
++|+++++++|.+|...+.+++.................+++++..++.+.|+.|+++++.+++||++|++.++++++.+
T Consensus 163 g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a 242 (370)
T 1gox_A 163 GRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLA 242 (370)
T ss_dssp CCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHH
T ss_pred cccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHH
Confidence 99999999999888766555542211000000011122356777788889999999999999999999999999999999
Q ss_pred HHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChH
Q 019244 217 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 296 (344)
Q Consensus 217 ~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~ 296 (344)
.++|+|+|+|+||||+++++++++++.+.++++.+++++|||++|||+++.|+.|++++|||+|++||+|++++++.|++
T Consensus 243 ~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~~ 322 (370)
T 1gox_A 243 VQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEA 322 (370)
T ss_dssp HHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHH
T ss_pred HHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccHH
Confidence 99999999999999999999999999999999988778999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceeeccCCCCCCCCCCC
Q 019244 297 GVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 344 (344)
Q Consensus 297 ~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~~~~~~~~~~~~ 344 (344)
++.++++.+.+||+.+|.++|+++++||++..+.....++.+..|.+|
T Consensus 323 gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~~~~~~~~~~ 370 (370)
T 1gox_A 323 GVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVARL 370 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC----------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHhhhcceeccccccccchhhcC
Confidence 999999999999999999999999999999999887776666665543
No 5
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=4.4e-61 Score=468.64 Aligned_cols=329 Identities=43% Similarity=0.757 Sum_probs=288.7
Q ss_pred CCCChHHHHHHHHHhCCccchhhhcCccccchHHHHhHhcccccceeecccCCCCCCCcceeecccccccceeecccccc
Q 019244 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (344)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iapm~~~ 82 (344)
+++|++|||+.||++||+.+|+|++||+++|.|+++|+.+|++|+|+||+|++++++||+|+|||++++.||+||||+++
T Consensus 4 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~~ 83 (380)
T 1p4c_A 4 NLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLN 83 (380)
T ss_dssp CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCcccc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCcc--------------------------ccCCHHHHHHHHHHHHHcCCcEEEeccCCccc
Q 019244 83 KMAHPEGEYATARAASAAGTIM--------------------------VYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 136 (344)
Q Consensus 83 ~~~~~~~~~~lA~aA~~~g~~~--------------------------~~~d~~~~~~~i~~a~~ag~~~l~~tvd~~~~ 136 (344)
++.|+++|.++|++|+++|+++ +++ ++...+++++++++|++++++|+|+|..
T Consensus 84 ~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~~ 162 (380)
T 1p4c_A 84 GALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVN 162 (380)
T ss_dssp GGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred ccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCccc
Confidence 9999999999999999999998 113 5777889999999999999999999999
Q ss_pred cccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCHHHHHHH
Q 019244 137 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDARIA 216 (344)
Q Consensus 137 g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~ 216 (344)
++|++|+++++..|...+..++.......+.......+..++....+++++|+.|+++++.+++||++|++.++++++.+
T Consensus 163 g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a 242 (380)
T 1p4c_A 163 GYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADRC 242 (380)
T ss_dssp CCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEECCHHHHHHH
T ss_pred cchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEecCcHHHHHHH
Confidence 99999999998766544443331000000100011112223333346788999999999999999999999999999999
Q ss_pred HHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChH
Q 019244 217 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 296 (344)
Q Consensus 217 ~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~ 296 (344)
.++|+|+|+|+||||+++++++++++.++++++.+ +.|||++|||+++.|+.|++++||++|++||++++++.+.|++
T Consensus 243 ~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~--~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~~g~~ 320 (380)
T 1p4c_A 243 IAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT--GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGET 320 (380)
T ss_dssp HHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH--CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc--CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHhcCHH
Confidence 99999999999999999999999999999999887 5699999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceeeccC
Q 019244 297 GVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 334 (344)
Q Consensus 297 ~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~~ 334 (344)
++.++++.+.+||+.+|.++|+++++||++..++..+.
T Consensus 321 ~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~g~ 358 (380)
T 1p4c_A 321 GVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEGV 358 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEEEC--
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHhccCeEEeccc
Confidence 99999999999999999999999999999999877653
No 6
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=1e-60 Score=481.03 Aligned_cols=325 Identities=41% Similarity=0.695 Sum_probs=289.5
Q ss_pred CCCChHHHHHHHHHhCCccchhhhcCccccchHHHHhHhcccccceeecccCCCCCCCcceeecccccccceeecccccc
Q 019244 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (344)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iapm~~~ 82 (344)
+++|++|||+.||++||+.+|+|+.||+++|.|+++|+.+|++|+|+||+|++++++||+|+|||+++++||+||||+++
T Consensus 121 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~~ 200 (511)
T 1kbi_A 121 NIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALC 200 (511)
T ss_dssp GCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred ccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEeccchhc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCC-hhhHHHHHHHHH--cCCcc-----------------------------ccCCHHHHHHHHHHHHHcCCcEEEec
Q 019244 83 KMAHP-EGEYATARAASA--AGTIM-----------------------------VYKDRNVVAQLVRRAERAGFKAIALT 130 (344)
Q Consensus 83 ~~~~~-~~~~~lA~aA~~--~g~~~-----------------------------~~~d~~~~~~~i~~a~~ag~~~l~~t 130 (344)
++.|+ +++.++|++|++ +|+++ +.+|++..++++++++++|++++++|
T Consensus 201 ~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~it 280 (511)
T 1kbi_A 201 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVT 280 (511)
T ss_dssp GGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEE
T ss_pred cccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 99998 899999999999 99987 14678889999999999999999999
Q ss_pred cCCccccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCH
Q 019244 131 VDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTA 210 (344)
Q Consensus 131 vd~~~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~ 210 (344)
+|+|++|+|+++++++|..|... .... ..... ....+...++....++.++|+.|+++++.+++||++|++.++
T Consensus 281 vd~p~~g~R~~~~r~g~~~p~~~-~~~~---~g~~~--~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~ 354 (511)
T 1kbi_A 281 VDAPSLGQREKDMKLKFSNTKAG-PKAM---KKTNV--EESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRT 354 (511)
T ss_dssp CSCSSCCCCHHHHHHHHTTCC-----------CCCC--SSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEECSH
T ss_pred CCCCCccccHHHHhccCCCCccc-cccc---ccccc--cccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCCCH
Confidence 99999999999999998766421 1100 00000 001122234444467788999999999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHc-----cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 285 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~-----~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~ 285 (344)
++|+.+.++|+|+|+|+||||++++.++++++.|+++.+.+ .+++|||++|||+++.|++|+|++|||+|+|||+
T Consensus 355 e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~ 434 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRP 434 (511)
T ss_dssp HHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 99999999999999999999999999999999999999887 3589999999999999999999999999999999
Q ss_pred HHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccceeecc
Q 019244 286 VVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEW 333 (344)
Q Consensus 286 ~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 333 (344)
|++++.+.|++++.++++.+++||+.+|.++|++++.+|++..+....
T Consensus 435 ~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~ 482 (511)
T 1kbi_A 435 FLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLST 482 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTT
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHHhhhhh
Confidence 999998889999999999999999999999999999999998886554
No 7
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=100.00 E-value=2.2e-45 Score=354.56 Aligned_cols=274 Identities=20% Similarity=0.316 Sum_probs=211.8
Q ss_pred hcccccceeecccC--CCCCCCcceeecccccccceeecccccccccCChhhHHHHHHHHHcCCccc-------cCCHHH
Q 019244 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMV-------YKDRNV 111 (344)
Q Consensus 41 ~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~~-------~~d~~~ 111 (344)
++||+|+|+|++|+ ++++|||+|+|||+++++||+|+||+++...++++|.+||++|+++|++|+ .++++.
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~~ 133 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPDD 133 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccCccc
Confidence 58999999999995 778999999999999999999999999998888999999999999999992 345554
Q ss_pred HHHH-HHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCC-cH-
Q 019244 112 VAQL-VRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SW- 188 (344)
Q Consensus 112 ~~~~-i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 188 (344)
..+ +.|....++..-.++.+.+. + +. .+.++.+.++.+.. +.+..|+.+++++++++ .|
T Consensus 134 -~~~~v~r~~P~~~~ianig~~~~~----e-~~-----------~~~ve~~~adal~i-hln~~qe~~~p~Gd~~~~~~~ 195 (365)
T 3sr7_A 134 -TSYQVKKSRPHLLLATNIGLDKPY----Q-AG-----------LQAVRDLQPLFLQV-HINLMQELLMPEGEREFRSWK 195 (365)
T ss_dssp ------------CCEEEEEETTSCH----H-HH-----------HHHHHHHCCSCEEE-EECHHHHHTSSSSCCCCHHHH
T ss_pred -cceEehhhCCCCcEEEEeCCCCCH----H-HH-----------HHHHHhcCCCEEEE-eccccccccCCCCCCcHHHHH
Confidence 322 33322222322222322211 0 00 01112222333332 45678999999999998 77
Q ss_pred HHHHHHHHhcCCcEEEEee---cCHHHHHHHHHcCCcEEEEccCCCCCC---------------CCchhhHHHHHHHHHH
Q 019244 189 KDVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGARQL---------------DYVPATIMALEEVVKA 250 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v---~~~~~a~~~~~~G~d~I~v~~~gG~~~---------------~~g~~~~~~l~~i~~~ 250 (344)
+.|+++++.+++||++|++ .++++|+.+.++|+|+|+|+|+||+++ +||.|+..+|+++. .
T Consensus 196 ~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~-~ 274 (365)
T 3sr7_A 196 KHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQ-P 274 (365)
T ss_dssp HHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHG-G
T ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHH-H
Confidence 5799999999999999998 899999999999999999999999864 78999999998764 4
Q ss_pred ccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhccccee
Q 019244 251 TQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 330 (344)
Q Consensus 251 ~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~ 330 (344)
+.+++|||++|||+++.|++|+|++|||+|++||+|++++.+.|++++.++++.+++||+.+|.++|+++++||++.+++
T Consensus 275 ~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~si~eL~~~~~~ 354 (365)
T 3sr7_A 275 LMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIAELRNVDYL 354 (365)
T ss_dssp GTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCSSTGGGGGCCEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccCCEE
Confidence 44589999999999999999999999999999999999998999999999999999999999999999999999999888
Q ss_pred ecc
Q 019244 331 TEW 333 (344)
Q Consensus 331 ~~~ 333 (344)
..+
T Consensus 355 ~~~ 357 (365)
T 3sr7_A 355 LYG 357 (365)
T ss_dssp ECH
T ss_pred Ecc
Confidence 654
No 8
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=100.00 E-value=3.9e-42 Score=332.81 Aligned_cols=277 Identities=20% Similarity=0.261 Sum_probs=221.0
Q ss_pred hcccccceeecccC--CCCCCCcceeecccccccceeecccccccccCChhhHHHHHHHHHcCCccc-------cCCHHH
Q 019244 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMV-------YKDRNV 111 (344)
Q Consensus 41 ~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~~-------~~d~~~ 111 (344)
+.||+|+|+|++|+ ++++|||+|+|||++++.||+|+||+|+.....+.|..||++|+++|+++. +++++.
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 57999999999999 789999999999999999999999998776555789999999999999992 235554
Q ss_pred HHHH--HHHHHHcCCcEEEeccCCccccc--cHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCc
Q 019244 112 VAQL--VRRAERAGFKAIALTVDTPRLGR--READIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 187 (344)
Q Consensus 112 ~~~~--i~~a~~ag~~~l~~tvd~~~~g~--r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (344)
.+.+ +++. +.-..+.-++..+++.. -....+ ..++.+..+.+.. +.+.+++.++++++++|.
T Consensus 107 ~~s~~~vr~~--ap~~~~~anlg~~ql~~~~~~~~~~-----------~av~~~~a~al~I-hln~~~~~~~p~g~~~~~ 172 (368)
T 3vkj_A 107 RESFAIVRKV--APTIPIIANLGMPQLVKGYGLKEFQ-----------DAIQMIEADAIAV-HLNPAQEVFQPEGEPEYQ 172 (368)
T ss_dssp SHHHHHHHHH--CSSSCEEEEEEGGGGGTTCCHHHHH-----------HHHHHTTCSEEEE-ECCHHHHHHSSSCCCBCB
T ss_pred HhhHHHHHHh--CcCcceecCcCeeecCCCCCHHHHH-----------HHHHHhcCCCeEE-EecchhhhhCCCCCchhh
Confidence 4443 3321 22112333333333311 111111 1111122223332 456789999988888885
Q ss_pred ---HHHHHHHHHhcCCcEEEEee---cCHHHHHHHHHcCCcEEEEccCCC---------CC--------------CCCch
Q 019244 188 ---WKDVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGA---------RQ--------------LDYVP 238 (344)
Q Consensus 188 ---~~~i~~i~~~~~~PvivK~v---~~~~~a~~~~~~G~d~I~v~~~gG---------~~--------------~~~g~ 238 (344)
++.|+++++.+++||++|++ .++++|+.+.++|+|+|+|+|||| |+ .+||.
T Consensus 173 ~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~ 252 (368)
T 3vkj_A 173 IYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGV 252 (368)
T ss_dssp THHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccc
Confidence 67899999999999999988 899999999999999999999999 32 35688
Q ss_pred hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCC
Q 019244 239 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGC 318 (344)
Q Consensus 239 ~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~ 318 (344)
|+..+|.++++.++ ++|||++|||+++.|++|+|++|||+|++||||++++. .|++++.++++.+.+||+.+|.++|+
T Consensus 253 pt~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~-~G~~~v~~~l~~l~~eL~~~m~~~G~ 330 (368)
T 3vkj_A 253 PTAASIMEVRYSVP-DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAI-EGKESLEQFFRKIIFELKAAMMLTGS 330 (368)
T ss_dssp BHHHHHHHHHHHST-TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHcC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999998874 69999999999999999999999999999999999865 68999999999999999999999999
Q ss_pred CCHhhhcccceeecc
Q 019244 319 RSLKEITRDHIVTEW 333 (344)
Q Consensus 319 ~~i~~l~~~~l~~~~ 333 (344)
++++||++.+++..+
T Consensus 331 ~~i~el~~~~l~~~~ 345 (368)
T 3vkj_A 331 KDVDALKKTSIVILG 345 (368)
T ss_dssp CBHHHHHTCCEEECH
T ss_pred CCHHHhccCCEEech
Confidence 999999998887653
No 9
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=100.00 E-value=5.5e-43 Score=335.60 Aligned_cols=291 Identities=23% Similarity=0.239 Sum_probs=209.8
Q ss_pred hhhhcCccccchHHHHhHhcccccceeecccC--CCCCCCcceeecccccccceeecccccccccCChhhHHHHHHHHHc
Q 019244 23 FDYYASGAEDQWTLQENRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAA 100 (344)
Q Consensus 23 ~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~ 100 (344)
.+|+..+.+++.|+++|+.+|++|+|+||+|+ +++++||+|+|+|++++.||+||||+++......+|.++|++|+++
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~ 87 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTGGEENGERINLALAEAAEAL 87 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC---CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEeccccCCcchhHHHHHHHHHHHHc
Confidence 47889999999999999999999999999999 7789999999999999999999999864322223458999999999
Q ss_pred CCccccCCH-HHHH-----HHHHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCcccccccccccccccccccchhh
Q 019244 101 GTIMVYKDR-NVVA-----QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGL 174 (344)
Q Consensus 101 g~~~~~~d~-~~~~-----~~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 174 (344)
|+++...+- ...+ ...+ .+. ..+|.|.+++++..+..++. .......++....+.+. .+.+..
T Consensus 88 G~~~~~~~~~~~le~~~~~~~~q-l~~-------~~~d~pv~~~~~~~q~~~~~--~~~~~~a~~~~~~~a~~-i~~n~~ 156 (332)
T 1vcf_A 88 GVGMMLGSGRILLERPEALRSFR-VRK-------VAPKALLIANLGLAQLRRYG--RDDLLRLVEMLEADALA-FHVNPL 156 (332)
T ss_dssp TCEEEEEECHHHHHCTTTHHHHC-CTT-------TCSSSCEEEEEEGGGGGTCC--HHHHHHHHHHHTCSEEE-EECCHH
T ss_pred CCCEEeCCchhcccCCCccceEE-eec-------cCCCceeecccChhhhhccC--hHHHHHHHhhcCCCcee-eccchH
Confidence 999932211 1111 1111 110 12577877777643322110 00000111111111111 123345
Q ss_pred HHHHhhcCCCCC--cHHHHHHHHHhcCCcEEEEee---cCHHHHHHHHHcCCcEEEEccCCC---------CC-------
Q 019244 175 AAYVAGQIDRSL--SWKDVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGA---------RQ------- 233 (344)
Q Consensus 175 ~~~~~~~~~~~~--~~~~i~~i~~~~~~PvivK~v---~~~~~a~~~~~~G~d~I~v~~~gG---------~~------- 233 (344)
+++++ .++.++ .|+.++++++ +++||++|++ .++++++.+.++|+|+|+|+|||| ++
T Consensus 157 ~~~~~-~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~ 234 (332)
T 1vcf_A 157 QEAVQ-RGDTDFRGLVERLAELLP-LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHP 234 (332)
T ss_dssp HHHHT-TSCCCCTTHHHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------
T ss_pred HHHhc-CCCccHHHHHHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhh
Confidence 66665 455554 3789999999 9999999988 899999999999999999999988 54
Q ss_pred --CCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHH
Q 019244 234 --LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFEL 311 (344)
Q Consensus 234 --~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~ 311 (344)
.++++++++.|.++++.++ ++|||++|||+++.|++|+|++|||+|++||+|++++ +.|++++.++++.+.+||+.
T Consensus 235 ~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~-~~G~~gv~~~~~~l~~el~~ 312 (332)
T 1vcf_A 235 ELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA-LEGAERVAAWIGDYLEELRT 312 (332)
T ss_dssp CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred hHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH-hccHHHHHHHHHHHHHHHHH
Confidence 6789999999999998874 6999999999999999999999999999999999987 78999999999999999999
Q ss_pred HHHHhCCCCHhhhcccc
Q 019244 312 AMALSGCRSLKEITRDH 328 (344)
Q Consensus 312 ~m~~~G~~~i~~l~~~~ 328 (344)
+|.++|+++++||++..
T Consensus 313 ~m~~~G~~~i~el~~~~ 329 (332)
T 1vcf_A 313 ALFAIGARNPKEARGRV 329 (332)
T ss_dssp HHHHHTCSSGGGGTTCE
T ss_pred HHHHhCCCCHHHHhhhh
Confidence 99999999999998754
No 10
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=1.2e-38 Score=311.96 Aligned_cols=287 Identities=19% Similarity=0.263 Sum_probs=205.7
Q ss_pred HHhCCccchhhhcCccccchHHHHhHhcccccceeec-ccCCCCCCCcceeecccccccceeecccccccccCChhhHHH
Q 019244 15 KEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPR-ILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYAT 93 (344)
Q Consensus 15 ~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr-~l~~~~~vd~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~l 93 (344)
..+||+..|+|+.+|++++ ++|..+||+|+|+|+ .+.+++++||+|+|+|++++.||++|||++ +.++ ++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~g--~~~~----~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSDA--LASP----EF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCTT--TCCH----HH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCCC--cccH----HH
Confidence 3578899999999999999 468999999999998 778999999999999999999999999983 3443 47
Q ss_pred HHHHHHcCCccc-----------------------------------------cC-CHHHHHHHHHHHHHcCCcEEEecc
Q 019244 94 ARAASAAGTIMV-----------------------------------------YK-DRNVVAQLVRRAERAGFKAIALTV 131 (344)
Q Consensus 94 A~aA~~~g~~~~-----------------------------------------~~-d~~~~~~~i~~a~~ag~~~l~~tv 131 (344)
|++++++|.+++ .. |++...+++++++++|+.+++ .+
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~-~v 162 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAV-RV 162 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEE-EE
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEE-Ee
Confidence 777777776551 11 555555566666666665432 11
Q ss_pred CCccccccHHHHHhhcCCCCcccccccccccccccccccchh-hHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCH
Q 019244 132 DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTA 210 (344)
Q Consensus 132 d~~~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~ 210 (344)
. +.+..+....+. ....+.+..+ .+. .+++ ..+...|+.++++++.+++||++|++.++
T Consensus 163 ~----~~~~~e~a~~~~-----------~agad~i~i~-~~~~~~~~----~~~~~~~~~i~~l~~~~~~pvi~ggi~t~ 222 (393)
T 2qr6_A 163 S----PQNVREIAPIVI-----------KAGADLLVIQ-GTLISAEH----VNTGGEALNLKEFIGSLDVPVIAGGVNDY 222 (393)
T ss_dssp C----TTTHHHHHHHHH-----------HTTCSEEEEE-CSSCCSSC----CCC-----CHHHHHHHCSSCEEEECCCSH
T ss_pred C----CccHHHHHHHHH-----------HCCCCEEEEe-CCcccccc----CCCcccHHHHHHHHHhcCCCEEECCcCCH
Confidence 1 112222211110 0000000000 000 0111 12234788899999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEcc--CCCCCC-CCchhhHHHHHHHHHH-------ccCC-CcEEEecCCCCHHHHHHHHHcCCCE
Q 019244 211 EDARIAVQAGAAGIIVSN--HGARQL-DYVPATIMALEEVVKA-------TQGR-IPVFLDGGVRRGTDVFKALALGASG 279 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~--~gG~~~-~~g~~~~~~l~~i~~~-------~~~~-~~via~GGIr~g~dv~kalalGAd~ 279 (344)
++++.+.++|+|+|+|++ |+++++ .+|+++++.|+++++. ++++ +|||++|||+++.|++|+|++||++
T Consensus 223 e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~ 302 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADA 302 (393)
T ss_dssp HHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCE
Confidence 999999999999999976 445444 3578999999988876 4333 9999999999999999999999999
Q ss_pred EEEchHH-----------HHHhhhcCh---HH--------------HHHHH----------HHHHHHHHHHHHHhCCCCH
Q 019244 280 IFIGRPV-----------VYSLAAEGE---KG--------------VRRVL----------EMLREEFELAMALSGCRSL 321 (344)
Q Consensus 280 V~ig~~~-----------l~~~~~~G~---~~--------------v~~~l----------~~l~~el~~~m~~~G~~~i 321 (344)
|++||+| +|++++.|. +| +.+++ +.|++||+..|.++|++++
T Consensus 303 V~iG~~~l~~~es~~~~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i 382 (393)
T 2qr6_A 303 VVLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYTDL 382 (393)
T ss_dssp EEECGGGGGSTTCTTTTEECCGGGGCSSSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBH
T ss_pred EEECHHHHcCCCCCCceEEEecccCcccCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHHHHHHhCCCCH
Confidence 9999996 555554432 22 23333 3678999999999999999
Q ss_pred hhhcccceee
Q 019244 322 KEITRDHIVT 331 (344)
Q Consensus 322 ~~l~~~~l~~ 331 (344)
+||++.+++.
T Consensus 383 ~el~~~~~~~ 392 (393)
T 2qr6_A 383 KSFQKVSLHV 392 (393)
T ss_dssp HHHTTCCEEE
T ss_pred HHHhhccEec
Confidence 9999988764
No 11
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=100.00 E-value=2.4e-37 Score=298.38 Aligned_cols=273 Identities=22% Similarity=0.293 Sum_probs=200.6
Q ss_pred hHhcccccceeecccC--CCCCCCcceeecccccccceeeccccccc-ccCChhhHHHHHHHHHcCCccc-------cCC
Q 019244 39 NRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQK-MAHPEGEYATARAASAAGTIMV-------YKD 108 (344)
Q Consensus 39 n~~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iapm~~~~-~~~~~~~~~lA~aA~~~g~~~~-------~~d 108 (344)
++.+|++|+|+|++|+ +++++||+|+|+|++++.||++|||++.. ..+++++.++|++|.++|+++. .++
T Consensus 21 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~l~~ 100 (349)
T 1p0k_A 21 RETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKD 100 (349)
T ss_dssp CCCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTTTTC
T ss_pred ccCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhcccC
Confidence 3568999999999998 77899999999999999999999995433 3446678999999999999971 234
Q ss_pred HHHHHHHHHHHHHcCCcEEEeccCCccccccHH-----HHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCC
Q 019244 109 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREA-----DIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 183 (344)
Q Consensus 109 ~~~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (344)
++.. ...+..++.. ++.|.++++.. ..... +.....+.+..+ .+..++..++.++
T Consensus 101 ~~~~-~~~~~~~~~~-------~~~pv~~~i~~~~~~~~~~~~-----------~~~~gad~i~i~-~~~~~~~~~~~~~ 160 (349)
T 1p0k_A 101 PSER-LSYEIVRKEN-------PNGLIFANLGSEATAAQAKEA-----------VEMIGANALQIH-LNVIQEIVMPEGD 160 (349)
T ss_dssp HHHH-HHHHHHHHHC-------SSSCEEEEEETTCCHHHHHHH-----------HHHTTCSEEEEE-ECTTTTC------
T ss_pred cccc-cceehhhhhC-------CCceeEEeecCCCCHHHHHHH-----------HHhcCCCeEEec-ccchhhhcCCCCC
Confidence 4321 1222222211 24454444321 11100 000001111111 1111223344456
Q ss_pred CCC--cHHHHHHHHHhcCCcEEEEee---cCHHHHHHHHHcCCcEEEEccCCC---------CC-------CCCchhhHH
Q 019244 184 RSL--SWKDVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGA---------RQ-------LDYVPATIM 242 (344)
Q Consensus 184 ~~~--~~~~i~~i~~~~~~PvivK~v---~~~~~a~~~~~~G~d~I~v~~~gG---------~~-------~~~g~~~~~ 242 (344)
+++ .++.++++++.+++||++|++ .++++++.+.++|+|+|+++|||| ++ .++++++.+
T Consensus 161 ~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~ 240 (349)
T 1p0k_A 161 RSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAA 240 (349)
T ss_dssp --CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHH
T ss_pred cchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHH
Confidence 666 357899999999999999997 889999999999999999999998 43 467889999
Q ss_pred HHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHh
Q 019244 243 ALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLK 322 (344)
Q Consensus 243 ~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i~ 322 (344)
.|.++++.+ .++|||++|||+++.|+.|++++|||+|++||+|++...+.|++++.++++.+.+||+.+|.++|+++++
T Consensus 241 ~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~~i~ 319 (349)
T 1p0k_A 241 SLAEIRSEF-PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGARTIA 319 (349)
T ss_dssp HHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBHH
T ss_pred HHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 999998876 5799999999999999999999999999999999998877788999999999999999999999999999
Q ss_pred hhcccceeec
Q 019244 323 EITRDHIVTE 332 (344)
Q Consensus 323 ~l~~~~l~~~ 332 (344)
|+++.+++..
T Consensus 320 el~~~~~~~~ 329 (349)
T 1p0k_A 320 DLQKAPLVIK 329 (349)
T ss_dssp HHTTCCEEEC
T ss_pred HHhhCCeecc
Confidence 9999988764
No 12
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=100.00 E-value=6.8e-37 Score=293.71 Aligned_cols=268 Identities=19% Similarity=0.208 Sum_probs=195.7
Q ss_pred HHHHhHhcccccceeeccc--CCCCCCCcceeecccccccceeecccccccccCChhhHHHHHHHHHcC-Ccc-ccCCHH
Q 019244 35 TLQENRNAFSRILFRPRIL--IDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAG-TIM-VYKDRN 110 (344)
Q Consensus 35 t~~~n~~~f~~i~l~pr~l--~~~~~vd~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g-~~~-~~~d~~ 110 (344)
-..+|..+||+|+|+|+++ .+++++||+|+|+|++++.||++|||++.. +..+|+++.+.| +.+ ..++++
T Consensus 8 ~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s------~~~la~a~~~~gg~g~~~~~~~~ 81 (336)
T 1ypf_A 8 HHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTII------DERIATYLAENNYFYIMHRFQPE 81 (336)
T ss_dssp ----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTC------CHHHHHHHHHTTCCCCCCCSSGG
T ss_pred ccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCCC------hHHHHHHHHhCCCEEEecCCCCH
Confidence 3568999999999999995 688999999999999999999999998643 245777655554 444 556777
Q ss_pred HHHHHHHHHHHcCCcEEEeccCCccccccHHHHHhhcCC-CCcccccccccccccccccccchhhHHHHhhcCCCCCcHH
Q 019244 111 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTL-PPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK 189 (344)
Q Consensus 111 ~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (344)
..+++++++++.|+. ++++ ++.++.+.+....+ ..+ ...+.+. .+. ..+++...|+
T Consensus 82 ~~~~~i~~~~~~g~~---v~v~---~g~~~~~~~~a~~~~~~g--------~~~~~i~---i~~------~~G~~~~~~~ 138 (336)
T 1ypf_A 82 KRISFIRDMQSRGLI---ASIS---VGVKEDEYEFVQQLAAEH--------LTPEYIT---IDI------AHGHSNAVIN 138 (336)
T ss_dssp GHHHHHHHHHHTTCC---CEEE---ECCSHHHHHHHHHHHHTT--------CCCSEEE---EEC------SSCCSHHHHH
T ss_pred HHHHHHHHHHhcCCe---EEEe---CCCCHHHHHHHHHHHhcC--------CCCCEEE---EEC------CCCCcHHHHH
Confidence 788899999887752 2333 34444443321000 000 0000000 000 0123445788
Q ss_pred HHHHHHHhcCCcEEEEe-ecCHHHHHHHHHcCCcEEEEccCCCCCCC------Cchh--hHHHHHHHHHHccCCCcEEEe
Q 019244 190 DVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSNHGARQLD------YVPA--TIMALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~~gG~~~~------~g~~--~~~~l~~i~~~~~~~~~via~ 260 (344)
.|+++++.++.|+++|+ +.++++|+.+.++|+|+|+++||||++.+ ++.+ +++.|+++++.+ ++|||++
T Consensus 139 ~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~ 216 (336)
T 1ypf_A 139 MIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIAD 216 (336)
T ss_dssp HHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEE
T ss_pred HHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEe
Confidence 99999999976777777 89999999999999999999999998754 3445 789999998877 8999999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHHH--------------------HHhhhcChHHHH-----------------HHHH
Q 019244 261 GGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEGEKGVR-----------------RVLE 303 (344)
Q Consensus 261 GGIr~g~dv~kalalGAd~V~ig~~~l--------------------~~~~~~G~~~v~-----------------~~l~ 303 (344)
|||+++.|++|+|++||++|++||+|+ |++++.|++++. ++++
T Consensus 217 GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~g~~~~~~g~~~~~~~~g~~~~~~~ 296 (336)
T 1ypf_A 217 GGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQKGEKKNVEGKKMFVEHKGSLEDTLI 296 (336)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC-----------------------CTTSCCSSSSCCCCHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhccCccccccceeeecccccHHHHHH
Confidence 999999999999999999999999999 888877777655 8999
Q ss_pred HHHHHHHHHHHHhCCCCHhhhcccceeecc
Q 019244 304 MLREEFELAMALSGCRSLKEITRDHIVTEW 333 (344)
Q Consensus 304 ~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 333 (344)
.+++||+..|.++|+++++||++..++...
T Consensus 297 ~l~~el~~~m~~~G~~~i~el~~~~~~~~~ 326 (336)
T 1ypf_A 297 EMEQDLQSSISYAGGTKLDSIRTVDYVVVK 326 (336)
T ss_dssp HHHHHHHHHHHHTTSSBGGGGGGCCEEECS
T ss_pred HHHHHHHHHHHHhCcccHHHhCcCCEEEEc
Confidence 999999999999999999999988776653
No 13
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=100.00 E-value=5.9e-34 Score=274.44 Aligned_cols=267 Identities=18% Similarity=0.215 Sum_probs=187.7
Q ss_pred HHHhHhcccccceeecccC-CC-CCCCcceeec-----ccccccceeecccccccccCChhhHHHHHHHHHcCCccc-cC
Q 019244 36 LQENRNAFSRILFRPRILI-DV-SKIDMNTTVL-----GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMV-YK 107 (344)
Q Consensus 36 ~~~n~~~f~~i~l~pr~l~-~~-~~vd~st~l~-----g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~~-~~ 107 (344)
+++|..+||+|.|+|+.+. +. +++||+|+|+ ++++++||+++||++. .+.+||++++++|...+ ..
T Consensus 15 ~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~------~~~~lA~Ava~~Gglg~i~~ 88 (351)
T 2c6q_A 15 VPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTV------GTFEMAKVLCKFSLFTAVHK 88 (351)
T ss_dssp ----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTT------SCHHHHHHHHHTTCEEECCT
T ss_pred cccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCC------CcHHHHHHHHHCCCEEEEcC
Confidence 5778899999999999985 67 7999999999 9999999999999852 35689999999997652 22
Q ss_pred --CHHHHHHHHHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCcccccccccc-cccccccccchhhHHHHhhcCCC
Q 019244 108 --DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-DLGKMDEANDSGLAAYVAGQIDR 184 (344)
Q Consensus 108 --d~~~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 184 (344)
+.+.....+++. ......+.+.+ +....+.... ...++.. ..+.+..+ ...+++
T Consensus 89 ~~s~e~~~~~i~~~-p~~l~~v~~~~-----g~~~~~~~~~--------~~l~~~~~g~~~i~i~---------~~~g~~ 145 (351)
T 2c6q_A 89 HYSLVQWQEFAGQN-PDCLEHLAASS-----GTGSSDFEQL--------EQILEAIPQVKYICLD---------VANGYS 145 (351)
T ss_dssp TCCHHHHHHHHHHC-GGGCTTEEEEE-----CSSHHHHHHH--------HHHHHHCTTCCEEEEE---------CSCTTB
T ss_pred CCCHHHHHHHHhhC-chhhheeEeec-----CCChHHHHHH--------HHHHhccCCCCEEEEE---------ecCCCc
Confidence 223322223220 00111111111 1111000000 0000000 00000000 001222
Q ss_pred CCcHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCC-----CC-CCchhhHHHHHHHHHHccC-CCc
Q 019244 185 SLSWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR-----QL-DYVPATIMALEEVVKATQG-RIP 256 (344)
Q Consensus 185 ~~~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~-----~~-~~g~~~~~~l~~i~~~~~~-~~~ 256 (344)
...|+.|+++++.+ ++||++|.+.++++|+.+.++|+|+|+|+++||+ +. .++.|++.+|.++.+.+.. ++|
T Consensus 146 ~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ip 225 (351)
T 2c6q_A 146 EHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGH 225 (351)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCc
Confidence 33678999999999 8999999999999999999999999999987763 22 3467888899888776532 799
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEchHHH--------------------HHhhhcC--------------hHH-----
Q 019244 257 VFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEG--------------EKG----- 297 (344)
Q Consensus 257 via~GGIr~g~dv~kalalGAd~V~ig~~~l--------------------~~~~~~G--------------~~~----- 297 (344)
||++|||+++.|++|||++||++|++|++|+ |++++.| ++|
T Consensus 226 vIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~~~g~~~~~~~~~g~~~~~ 305 (351)
T 2c6q_A 226 IISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEV 305 (351)
T ss_dssp EEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHHHSSSCCTTCCCCBCEEEE
T ss_pred EEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhcccccccccccccceEEEe
Confidence 9999999999999999999999999999997 6665433 366
Q ss_pred -----HHHHHHHHHHHHHHHHHHhCCCCHhhhcccceee
Q 019244 298 -----VRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 331 (344)
Q Consensus 298 -----v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~ 331 (344)
+.++++.|+.||+..|.++|+++++||++.....
T Consensus 306 ~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~~~~v 344 (351)
T 2c6q_A 306 PFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFI 344 (351)
T ss_dssp ECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHHCCEE
T ss_pred eccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhCCcEE
Confidence 9999999999999999999999999998775444
No 14
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.97 E-value=1.5e-30 Score=250.02 Aligned_cols=254 Identities=17% Similarity=0.241 Sum_probs=176.2
Q ss_pred hcccccceeecccCCCC--CCC--cceeecccccccceeecccccccccCChhhHHHHHHHHHcCCccccCCHHHHHHHH
Q 019244 41 NAFSRILFRPRILIDVS--KID--MNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMVYKDRNVVAQLV 116 (344)
Q Consensus 41 ~~f~~i~l~pr~l~~~~--~vd--~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~~~~d~~~~~~~i 116 (344)
.+||+|.|+|+.+.+.+ ++| |+|+|+|++++.||++|||. +.++.+||++++++|.+++.......+++.
T Consensus 8 ~~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM~------~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~ 81 (361)
T 3r2g_A 8 ITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANMD------TITESNMANFMHSKGAMGALHRFMTIEENI 81 (361)
T ss_dssp CCGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCST------TTCSHHHHHHHHHTTCEEBCCSCSCHHHHH
T ss_pred cccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCCC------CchHHHHHHHHHHcCCCEEEeCCCCHHHHH
Confidence 47999999999998766 766 45599999999999999993 457889999999999887322111122333
Q ss_pred HHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHH
Q 019244 117 RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQT 196 (344)
Q Consensus 117 ~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 196 (344)
+..++..... ...+. .++...... ..+.....+.+..+. +.+++...|+.|+++++
T Consensus 82 ~~i~~~~~~~-~~~~g-----~~~~~~e~~---------~~a~~aGvdvI~id~---------a~G~~~~~~e~I~~ir~ 137 (361)
T 3r2g_A 82 QEFKKCKGPV-FVSVG-----CTENELQRA---------EALRDAGADFFCVDV---------AHAHAKYVGKTLKSLRQ 137 (361)
T ss_dssp HHHHTCCSCC-BEEEC-----SSHHHHHHH---------HHHHHTTCCEEEEEC---------SCCSSHHHHHHHHHHHH
T ss_pred HHHhhcceEE-EEEcC-----CCHHHHHHH---------HHHHHcCCCEEEEeC---------CCCCcHhHHHHHHHHHH
Confidence 3333322110 01111 111110000 000000000000000 01122235789999999
Q ss_pred hc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCC------CCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHH
Q 019244 197 IT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL------DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 269 (344)
Q Consensus 197 ~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~------~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv 269 (344)
.+ ++||++|.+.|+++|+.+.++|+|+|+|++++|+.. .++.|++..+.++++.. . |||++|||+++.|+
T Consensus 138 ~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~--~-PVIAdGGI~~~~di 214 (361)
T 3r2g_A 138 LLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRAD--R-SIVADGGIKTSGDI 214 (361)
T ss_dssp HHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSS--S-EEEEESCCCSHHHH
T ss_pred hcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhC--C-CEEEECCCCCHHHH
Confidence 98 799999999999999999999999999998888753 23567888888876544 2 99999999999999
Q ss_pred HHHHHcCCCEEEEchHHHHH---------------------hhh-----------------cChH-------HHHHHHHH
Q 019244 270 FKALALGASGIFIGRPVVYS---------------------LAA-----------------EGEK-------GVRRVLEM 304 (344)
Q Consensus 270 ~kalalGAd~V~ig~~~l~~---------------------~~~-----------------~G~~-------~v~~~l~~ 304 (344)
.|+|++|||+|++||+|+-. |++ +|.+ .+.+++.+
T Consensus 215 ~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~ 294 (361)
T 3r2g_A 215 VKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQMHEWKTAEGVATEVPFKENPDGIIAD 294 (361)
T ss_dssp HHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHHHHHHHHTTCCSTTCCSCCCCEEEECBCCHHHHHHH
T ss_pred HHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCcchhhhhhccccccccCCcceeecCCCCCHHHHHHH
Confidence 99999999999999998532 111 1111 37899999
Q ss_pred HHHHHHHHHHHhCCCCHhhhccc
Q 019244 305 LREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 305 l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
|...|+..|.++|+.+|+||++.
T Consensus 295 ~~~glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 295 IIGGLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHT
T ss_pred HHHHHHHHhhhcCcccHHHHHhC
Confidence 99999999999999999999654
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.96 E-value=3.4e-28 Score=238.71 Aligned_cols=285 Identities=18% Similarity=0.241 Sum_probs=179.6
Q ss_pred HhcccccceeecccC-CCCCCCcceeec-ccccccceeecccccccccCChhhHHHHHHHHHcCCcc-cc--CCHHHHHH
Q 019244 40 RNAFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIM-VY--KDRNVVAQ 114 (344)
Q Consensus 40 ~~~f~~i~l~pr~l~-~~~~vd~st~l~-g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~-~~--~d~~~~~~ 114 (344)
..+||+|+|+|+.+. +++++||+|+|+ |++++.||+++||++. .+. .+|.+++++|... +. .+.+....
T Consensus 9 ~~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~~----~~~--ela~a~a~aGglg~i~~~~s~e~~~~ 82 (404)
T 1eep_A 9 ALTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTV----TES--QMAIAIAKEGGIGIIHKNMSIEAQRK 82 (404)
T ss_dssp CCCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTT----CSH--HHHHHHHHHTSEEEECSSSCHHHHHH
T ss_pred CCCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCCC----CCH--HHHHHHHHCCCEEEECCCCCHHHHHH
Confidence 357999999999986 789999999999 9999999999999862 233 4555577777655 32 34444444
Q ss_pred HHHHHHHcCC-cEE------------EeccCCccccc--cHHHHHhhcCCCCcc--------ccccccccccccccc--c
Q 019244 115 LVRRAERAGF-KAI------------ALTVDTPRLGR--READIKNRFTLPPFL--------TLKNFQGLDLGKMDE--A 169 (344)
Q Consensus 115 ~i~~a~~ag~-~~l------------~~tvd~~~~g~--r~~~~~~~~~~~~g~--------~~~~~~~~~~~~~~~--~ 169 (344)
.+++.++... ..+ .++.+.. .+. ..++.......|... ...++... .+.... .
T Consensus 83 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~-~~~~~~a~~ 160 (404)
T 1eep_A 83 EIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQH-LEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSID-IDTIERVEE 160 (404)
T ss_dssp HHHHHHTCC---------------------------------------CCTTCCBCTTSCBCCEEEECSC-TTHHHHHHH
T ss_pred HHHHHHhhccCCCceeccccccccccccccCCC-CCHHHHHHHHHHhhhcchhhhhcccCceEEEEeCCC-hhHHHHHHH
Confidence 4444333220 000 0000000 000 000111000122100 00111100 000000 0
Q ss_pred cchhhHHHH---hhcCCCCCcHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchh
Q 019244 170 NDSGLAAYV---AGQIDRSLSWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPA 239 (344)
Q Consensus 170 ~~~~~~~~~---~~~~~~~~~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~ 239 (344)
........+ ...+++...|+.++++++.+ ++||+++.+.+.++++.+.++|+|+|+++.++|+. ..++.+
T Consensus 161 ~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p 240 (404)
T 1eep_A 161 LVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVP 240 (404)
T ss_dssp HHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCC
T ss_pred HHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcc
Confidence 000000001 11234445688999999999 89999999999999999999999999996555531 124566
Q ss_pred hHHHHHHHHHHcc-CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH--------------------HHhhh------
Q 019244 240 TIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAA------ 292 (344)
Q Consensus 240 ~~~~l~~i~~~~~-~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l--------------------~~~~~------ 292 (344)
+++.+.++.+.+. .++|||++|||+++.|+.|++++|||+|++||+|+ +++..
T Consensus 241 ~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~ 320 (404)
T 1eep_A 241 QITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKR 320 (404)
T ss_dssp HHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC------------
T ss_pred hHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCCCCHHHHhh
Confidence 7888888887653 37999999999999999999999999999999994 44332
Q ss_pred -------------------cChHH-------HHHHHHHHHHHHHHHHHHhCCCCHhhhcccceeec
Q 019244 293 -------------------EGEKG-------VRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 332 (344)
Q Consensus 293 -------------------~G~~~-------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~ 332 (344)
+|.++ |.++++.|.+||+..|.++|+++++||++..+..+
T Consensus 321 g~~~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~~~~~~ 386 (404)
T 1eep_A 321 GSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFVK 386 (404)
T ss_dssp ------------------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEEE
T ss_pred ccccchhcccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCcEEE
Confidence 23333 88999999999999999999999999998766543
No 16
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.94 E-value=4.8e-27 Score=254.63 Aligned_cols=282 Identities=19% Similarity=0.148 Sum_probs=194.6
Q ss_pred hHhcccccceeecccC--CCCCCCcceeecccccccceeecccccccccCChhhHHHHHHHHHcCCccc----cCCHHHH
Q 019244 39 NRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMV----YKDRNVV 112 (344)
Q Consensus 39 n~~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~~----~~d~~~~ 112 (344)
....|+++.+.+..++ +++++|+++ .+..||+++||+++.++ ++++.+||+||+++|+.+. ..+++..
T Consensus 821 ~~~~~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~GalS-~ea~~aLA~Aa~~aGg~~~tGeGg~~pe~~ 894 (1479)
T 1ea0_A 821 PPMQLRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGALS-PEAHGTLNVAMNRIGAKSDSGEGGEDPARF 894 (1479)
T ss_dssp CCCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTTBC-HHHHHHHHHHHHHTTCEEECCTTCCCGGGS
T ss_pred CCCchhhhhhccCCCCCCCcccccccc-----cccCCeEecCccccccC-HHHHHHHHHHHHHcCCeeEcCCCccCHHHh
Confidence 3457999999988876 456788777 56899999999988654 6789999999999999882 2233321
Q ss_pred HHHHHHHHHcCC-cEEEeccCCccccccHHHHHhh----cCCCCccccccccccccccccc-----ccchhhHHHHhhcC
Q 019244 113 AQLVRRAERAGF-KAIALTVDTPRLGRREADIKNR----FTLPPFLTLKNFQGLDLGKMDE-----ANDSGLAAYVAGQI 182 (344)
Q Consensus 113 ~~~i~~a~~ag~-~~l~~tvd~~~~g~r~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 182 (344)
... .. ..... ....++ ...+|.....+.+. ..+.+|..+...+.+....+.. ...+..++.+++.+
T Consensus 895 ~~~-~~-g~~~~~~IrQ~a--sg~FGVn~~~l~~a~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv~lisP~~ 970 (1479)
T 1ea0_A 895 RPD-KN-GDNWNSAIKQVA--SGRFGVTAEYLNQCRELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLISPPP 970 (1479)
T ss_dssp SBC-TT-SCBCCCSEEEEC--SSCTTCCHHHHTSCSEEEEECCCTTSTTTCCEECGGGCCHHHHHHHTCCTTCCEECCSS
T ss_pred hhc-cc-cchhhhhhhhhc--CCCCCcChHHccccchHHHHHhccCCCCcCCCCCHHHHHHHHHHHcCCCCCCCccCCCC
Confidence 100 00 00011 112222 22334332222210 1112222221111121111110 12233345556666
Q ss_pred CCCC-cHH----HHHHHHHhc-CCcEEEEeec---CHHHHHHHHHcCCcEEEEccCC-CCC-------CCCchhhHHHHH
Q 019244 183 DRSL-SWK----DVKWLQTIT-KLPILVKGVL---TAEDARIAVQAGAAGIIVSNHG-ARQ-------LDYVPATIMALE 245 (344)
Q Consensus 183 ~~~~-~~~----~i~~i~~~~-~~PvivK~v~---~~~~a~~~~~~G~d~I~v~~~g-G~~-------~~~g~~~~~~l~ 245 (344)
+.++ +++ .|+++++.+ ++||++|++. ..++|+.+.++|||+|+|+|++ |+. .++|.|+..+|+
T Consensus 971 ~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ 1050 (1479)
T 1ea0_A 971 HHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLS 1050 (1479)
T ss_dssp CTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHH
T ss_pred CcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHH
Confidence 6665 453 589999988 7999999985 3678999999999999999984 432 246788999999
Q ss_pred HHHHHc-----cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhh---------------------------c
Q 019244 246 EVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA---------------------------E 293 (344)
Q Consensus 246 ~i~~~~-----~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~---------------------------~ 293 (344)
++.+.+ ++++|||++|||+++.|++|+++|||++|++||+||++++| .
T Consensus 1051 ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~g 1130 (1479)
T 1ea0_A 1051 EVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVG 1130 (1479)
T ss_dssp HHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCC
T ss_pred HHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhhcCC
Confidence 998875 34799999999999999999999999999999999998754 3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhc-cccee
Q 019244 294 GEKGVRRVLEMLREEFELAMALSGCRSLKEIT-RDHIV 330 (344)
Q Consensus 294 G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~-~~~l~ 330 (344)
|.++|.++++.+.+||+.+|..+|+++++||. +.++.
T Consensus 1131 g~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~g~~~ll 1168 (1479)
T 1ea0_A 1131 TPEKVVNLFTFLAEEVREILAGLGFRSLNEVIGRTDLL 1168 (1479)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCSCSGGGTTCGGGE
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCchhee
Confidence 67899999999999999999999999999994 33443
No 17
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.94 E-value=6.8e-26 Score=246.15 Aligned_cols=285 Identities=18% Similarity=0.126 Sum_probs=194.7
Q ss_pred hcccccceeecccC--CCCCCCcceeecccccccceeecccccccccCChhhHHHHHHHHHcCCccc----cCCHHHHHH
Q 019244 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMV----YKDRNVVAQ 114 (344)
Q Consensus 41 ~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~~----~~d~~~~~~ 114 (344)
..|+++.+.+..++ +++++|+++ .+..||++++|+++.++ ++++.+||.||+++|+.+. ..+++....
T Consensus 840 ~~~r~l~~~~~~~~~i~~~ev~~~~-----~I~~Pfii~aMS~GslS-~ea~~aLA~Aas~aGg~~~tGeGg~~pe~~~~ 913 (1520)
T 1ofd_A 840 TALRDLLDFNADQPAISLEEVESVE-----SIVKRFCTGGMSLGALS-REAHETLAIAMNRLGAKSNSGEGGEDVVRYLT 913 (1520)
T ss_dssp CSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEECCCBCTTTSC-HHHHHHHHHHHHHHTCBCEECTTCCCGGGGSC
T ss_pred cchhhhccccCCCCCCCchhhcccc-----cccCceEecCcCccccc-HHHHHHHHHHHHHcCCceEeCCCCCCHHHHHh
Confidence 46899998887775 346777666 56899999999988654 5789999999999999882 234433210
Q ss_pred HHH--------HH-----HHcCC--cEEEeccCCccccccHHHHHhh--c--CCCCccccccccccccccccc-----cc
Q 019244 115 LVR--------RA-----ERAGF--KAIALTVDTPRLGRREADIKNR--F--TLPPFLTLKNFQGLDLGKMDE-----AN 170 (344)
Q Consensus 115 ~i~--------~a-----~~ag~--~~l~~tvd~~~~g~r~~~~~~~--~--~~~~g~~~~~~~~~~~~~~~~-----~~ 170 (344)
-++ .+ ...|- ...+..+....+|.......+. + .+.+|..+...+.+....+.. ..
T Consensus 914 eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Ql~sg~FGVn~~~l~~ad~IeIKi~QGAKpG~GG~Lp~~kV~~~iA~~R~ 993 (1520)
T 1ofd_A 914 LDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGKKVSEYIAMLRR 993 (1520)
T ss_dssp CCCCCTTSCCTTSTTCCSCCTTCCCCCSEEEECTTCTTCCHHHHHHCSEEEEECCCTTSTTSCCEECGGGCCHHHHHHHT
T ss_pred hhccccccccccccccccccCcchHHHHHHHhcCCCCccChhhccchHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHcC
Confidence 000 00 00010 0112222233344432222210 1 122222221111222111110 11
Q ss_pred chhhHHHHhhcCCCCC-cH----HHHHHHHHhc-CCcEEEEeec---CHHHHHHHHHcCCcEEEEccCC-CCC-------
Q 019244 171 DSGLAAYVAGQIDRSL-SW----KDVKWLQTIT-KLPILVKGVL---TAEDARIAVQAGAAGIIVSNHG-ARQ------- 233 (344)
Q Consensus 171 ~~~~~~~~~~~~~~~~-~~----~~i~~i~~~~-~~PvivK~v~---~~~~a~~~~~~G~d~I~v~~~g-G~~------- 233 (344)
.+..++.+++.+++++ ++ +.|+++++.+ ++||++|++. ..++|+.+.++|||+|+|+|++ |+.
T Consensus 994 ~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~ 1073 (1520)
T 1ofd_A 994 SKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSI 1073 (1520)
T ss_dssp SCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHH
T ss_pred CCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhh
Confidence 2233445666666666 44 4589999988 8999999985 3678999999999999999985 432
Q ss_pred CCCchhhHHHHHHHHHHc-----cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhh----------------
Q 019244 234 LDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA---------------- 292 (344)
Q Consensus 234 ~~~g~~~~~~l~~i~~~~-----~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~---------------- 292 (344)
.++|.|+..+|+++.+.+ ++++|||++|||+++.|++|+++|||++|++||+||++++|
T Consensus 1074 ~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~Ch~~~CP~Gva 1153 (1520)
T 1ofd_A 1074 KHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVA 1153 (1520)
T ss_dssp HHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCCGGGTCCTTSSS
T ss_pred cCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHHhccCCCCCceeE
Confidence 246788999999998765 34799999999999999999999999999999999998754
Q ss_pred -----------cChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhc-ccceee
Q 019244 293 -----------EGEKGVRRVLEMLREEFELAMALSGCRSLKEIT-RDHIVT 331 (344)
Q Consensus 293 -----------~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~-~~~l~~ 331 (344)
.|+++|.++++.+.+||+.+|..+|+++++||. +.++..
T Consensus 1154 tqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~dll~ 1204 (1520)
T 1ofd_A 1154 TQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLK 1204 (1520)
T ss_dssp CCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCGGGEE
T ss_pred eeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCcceEEe
Confidence 268899999999999999999999999999995 444443
No 18
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.93 E-value=1.1e-24 Score=210.25 Aligned_cols=255 Identities=19% Similarity=0.250 Sum_probs=177.2
Q ss_pred hcccccceeecccCC--CCCCCcceeec-ccccccceeecccccccccCChhhHHHHHHHHHcCC-cccc--CCHHHHHH
Q 019244 41 NAFSRILFRPRILID--VSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGT-IMVY--KDRNVVAQ 114 (344)
Q Consensus 41 ~~f~~i~l~pr~l~~--~~~vd~st~l~-g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~-~~~~--~d~~~~~~ 114 (344)
..||++.|+|+ +++ .++||++|+|. +..+..||+++||.+.. +..||.+.++.|. .++. .+.+...+
T Consensus 13 ~~fddv~l~p~-~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt------~~~lA~avA~~GGlgii~~~~s~e~~~~ 85 (361)
T 3khj_A 13 LTFEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHKNMDMESQVN 85 (361)
T ss_dssp CCGGGEEECCC-CBCCCGGGCCCCEESSSSCEESSSEEECSSTTTC------SHHHHHHHHHTTCEEEECSSSCHHHHHH
T ss_pred CCcceEEEECC-CCCCCHHHccCceecccccccCCCEEeecCCCCC------cHHHHHHHHHcCCCeEEecCCCHHHHHH
Confidence 46999999998 553 46899999997 68999999999997532 3478886665554 4443 35666667
Q ss_pred HHHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHH
Q 019244 115 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWL 194 (344)
Q Consensus 115 ~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 194 (344)
.+++.++.+-..+.+++.... ....+.... .| .+.+. .+ ...+++....+.++++
T Consensus 86 ~I~~vk~~~~~pvga~ig~~~----~e~a~~l~e--aG----------ad~I~---ld------~a~G~~~~~~~~i~~i 140 (361)
T 3khj_A 86 EVLKVKNSGGLRVGAAIGVNE----IERAKLLVE--AG----------VDVIV---LD------SAHGHSLNIIRTLKEI 140 (361)
T ss_dssp HHHHHHHTTCCCCEEEECTTC----HHHHHHHHH--TT----------CSEEE---EC------CSCCSBHHHHHHHHHH
T ss_pred HHHHHHhccCceEEEEeCCCH----HHHHHHHHH--cC----------cCeEE---Ee------CCCCCcHHHHHHHHHH
Confidence 788887655332333332211 111100000 00 00000 00 0112222335679999
Q ss_pred HHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchhhHHHHHHHHHHccC-CCcEEEecCCCCHH
Q 019244 195 QTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGT 267 (344)
Q Consensus 195 ~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~~~~~l~~i~~~~~~-~~~via~GGIr~g~ 267 (344)
++.+++||+++.+.++++++.+.++|+|+|+++.++|.. ..++.|++..+.++++.... ++|||++|||+++.
T Consensus 141 ~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~ 220 (361)
T 3khj_A 141 KSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSG 220 (361)
T ss_dssp HHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHH
T ss_pred HHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHH
Confidence 998899999999999999999999999999996555431 23457888888888665422 69999999999999
Q ss_pred HHHHHHHcCCCEEEEchHHH--------------------HHhhhc--------------C-------hH----------
Q 019244 268 DVFKALALGASGIFIGRPVV--------------------YSLAAE--------------G-------EK---------- 296 (344)
Q Consensus 268 dv~kalalGAd~V~ig~~~l--------------------~~~~~~--------------G-------~~---------- 296 (344)
|+.|++++||++|++|+.|+ |++++. + ++
T Consensus 221 di~kala~GAd~V~vGs~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~~~~~~~y~~~~~~~~~~~~eg~~~~v~~~g 300 (361)
T 3khj_A 221 DIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEGIEGRVKYKG 300 (361)
T ss_dssp HHHHHHHHTCSEEEESTTTTTBTTSSCEEEEETTEEEEEC---------------------------------CEEECCB
T ss_pred HHHHHHHcCCCEEEEChhhhcCCcCCcchhhcCCeEEEEeeccchHHHHhccchhhhhcccccccccCCCccEEeCCCCC
Confidence 99999999999999999873 343210 1 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 019244 297 GVRRVLEMLREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 297 ~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
.+.+++.++...|+..|.++|+++|+||+..
T Consensus 301 ~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~ 331 (361)
T 3khj_A 301 EMEGVVYQLVGGLRSCMGYLGSASIEELWKK 331 (361)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhhcCCccHHHHHhC
Confidence 2779999999999999999999999999864
No 19
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.91 E-value=2.1e-23 Score=203.17 Aligned_cols=279 Identities=18% Similarity=0.212 Sum_probs=175.5
Q ss_pred cccccceeeccc-CCCCCCCcceeec-ccccccceeecccccccccCChhhHHHHHHHHHcCCcc---ccCCHHHHHHHH
Q 019244 42 AFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIM---VYKDRNVVAQLV 116 (344)
Q Consensus 42 ~f~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~---~~~d~~~~~~~i 116 (344)
.||++.|+|..- ...++||++|.|- ...+..||+.+||++ ...+ .||.+.+++|... ...+++...+.+
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~--Vs~~----~lA~Ava~aGGlGvi~~~~~~e~~~~~i 84 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDT--VTEH----LMAVGMARLGGIGIIHKNMDMESQVNEV 84 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTT--TCSS----HHHHHHHTTTCEEEECSSSCHHHHHHHH
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCC--cCcH----HHHHHHHHCCCEEEeCCCCCHHHHHHHH
Confidence 599999999754 2346899999986 478899999999973 3434 5999999998766 245788888888
Q ss_pred HHHHHcCCc----EEE--eccCCcccccc-HHHHHhhcCCCCccccccccccccc-ccccccchhhHHH-------Hh--
Q 019244 117 RRAERAGFK----AIA--LTVDTPRLGRR-EADIKNRFTLPPFLTLKNFQGLDLG-KMDEANDSGLAAY-------VA-- 179 (344)
Q Consensus 117 ~~a~~ag~~----~l~--~tvd~~~~g~r-~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~-- 179 (344)
+++++..-. .+. +++-.+....+ .+++......|...... .+.+... .+......-+..+ +.
T Consensus 85 ~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~~~~~~~p~~~~d~-~g~l~v~~~v~~~~~e~~~~lveaGvdvIvld 163 (400)
T 3ffs_A 85 LKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNIDAYSNENLDN-KGRLRVGAAIGVNEIERAKLLVEAGVDVIVLD 163 (400)
T ss_dssp HHHHCCC-------------------------------CCTTCCBCT-TSSBCCEEEECCC-CHHHHHHHHHTCSEEEEC
T ss_pred HHHHhhccCcccCCCCccccccCCCCCHHHHHHHHHhhhCcchhhcc-ccceeEEeecCCCHHHHHHHHHHcCCCEEEEe
Confidence 888764321 110 11100000000 01111111122110000 0000000 0000000000111 10
Q ss_pred -hcCCCCCcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCC-----C-CCCchhhHHHHHHHHHHcc
Q 019244 180 -GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR-----Q-LDYVPATIMALEEVVKATQ 252 (344)
Q Consensus 180 -~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~-----~-~~~g~~~~~~l~~i~~~~~ 252 (344)
..+++...++.|+++++.+++||+++.+.+.++++.+.++|+|+|++++.+|+ . ..++.|++.++.++++.+.
T Consensus 164 ta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~ 243 (400)
T 3ffs_A 164 SAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVAS 243 (400)
T ss_dssp CSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHT
T ss_pred CCCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHH
Confidence 11122123567999999889999999999999999999999999999543332 1 1346788999999987754
Q ss_pred C-CCcEEEecCCCCHHHHHHHHHcCCCEEEEchHH--------------------HHHhhhc--------------C---
Q 019244 253 G-RIPVFLDGGVRRGTDVFKALALGASGIFIGRPV--------------------VYSLAAE--------------G--- 294 (344)
Q Consensus 253 ~-~~~via~GGIr~g~dv~kalalGAd~V~ig~~~--------------------l~~~~~~--------------G--- 294 (344)
. ++|||++|||+++.|+.|++++||++|++|+.| +|+|++. +
T Consensus 244 ~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s~~am~~~~~~ry~~~~~~~ 323 (400)
T 3ffs_A 244 KFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPE 323 (400)
T ss_dssp TTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTSSCCEEESSSSEEEC-------------------------
T ss_pred hcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCCCchhhhcCCeeeeeecCcchHHHHhccccchhhcccccc
Confidence 2 799999999999999999999999999999988 3444310 0
Q ss_pred ----hH----------HHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 019244 295 ----EK----------GVRRVLEMLREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 295 ----~~----------~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
++ .+.+++.+|...|+..|.++|+++|+||+..
T Consensus 324 ~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~~~y~G~~~i~el~~~ 370 (400)
T 3ffs_A 324 NKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 370 (400)
T ss_dssp ----------CEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred cccCCCCcEEecCCCCCHHHHHHHHHHHHHHhhhhcCcccHHHHHhC
Confidence 12 2788999999999999999999999999754
No 20
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.91 E-value=1.7e-23 Score=202.01 Aligned_cols=256 Identities=19% Similarity=0.246 Sum_probs=176.0
Q ss_pred cccccceeecccC--CCCCCCcceeec-ccccccceeecccccccccCChhhHHHHHHHHHcCCcc-c--cCCHHHHHHH
Q 019244 42 AFSRILFRPRILI--DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIM-V--YKDRNVVAQL 115 (344)
Q Consensus 42 ~f~~i~l~pr~l~--~~~~vd~st~l~-g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~-~--~~d~~~~~~~ 115 (344)
.||++.|+|. ++ +.+++|++|.|. ...+..||+.+||++.. +..||.+.++.|... + ..+++...+.
T Consensus 15 ~fddv~lvp~-~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs------~~~lA~avA~aGGlg~i~~~~s~e~~~~~ 87 (366)
T 4fo4_A 15 TFDDVLLVPA-HSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHKNMSIEQQAAQ 87 (366)
T ss_dssp CGGGEEECCC-CCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECSSSCHHHHHHH
T ss_pred CcceEEEECC-CCCCChhhcccceecccccccCCCEEeCCCCCCC------hHHHHHHHHHcCCceEeecCCCHHHHHHH
Confidence 6999999997 43 345899999997 58899999999997432 347888877776544 3 3467777777
Q ss_pred HHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHH
Q 019244 116 VRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQ 195 (344)
Q Consensus 116 i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 195 (344)
++++++.+.-.+.+.+..... . ....+... ....+.+... ...+++....+.|++++
T Consensus 88 i~~vk~~~~l~vga~vg~~~~-~-~~~~~~li------------eaGvd~I~id---------ta~G~~~~~~~~I~~ik 144 (366)
T 4fo4_A 88 VHQVKISGGLRVGAAVGAAPG-N-EERVKALV------------EAGVDVLLID---------SSHGHSEGVLQRIRETR 144 (366)
T ss_dssp HHHHHTTTSCCCEEECCSCTT-C-HHHHHHHH------------HTTCSEEEEE---------CSCTTSHHHHHHHHHHH
T ss_pred HHHHHhcCceeEEEEeccChh-H-HHHHHHHH------------hCCCCEEEEe---------CCCCCCHHHHHHHHHHH
Confidence 888876531111111110000 0 00000000 0000000000 01122222345689999
Q ss_pred Hhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchhhHHHHHHHHHHcc-CCCcEEEecCCCCHH
Q 019244 196 TIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGT 267 (344)
Q Consensus 196 ~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~~~~~l~~i~~~~~-~~~~via~GGIr~g~ 267 (344)
+.+ ++||+++.+.++++++.+.++|+|+|+++..+|.. ..++.+++.++.++++... .++|||++|||+++.
T Consensus 145 ~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~ 224 (366)
T 4fo4_A 145 AAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSG 224 (366)
T ss_dssp HHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHH
T ss_pred HhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHH
Confidence 988 79999999999999999999999999995433421 1356788899998887543 279999999999999
Q ss_pred HHHHHHHcCCCEEEEchHHHH--------------------Hhhh-----c---------C-------hH----------
Q 019244 268 DVFKALALGASGIFIGRPVVY--------------------SLAA-----E---------G-------EK---------- 296 (344)
Q Consensus 268 dv~kalalGAd~V~ig~~~l~--------------------~~~~-----~---------G-------~~---------- 296 (344)
|+.|+|++||++|++|+.|+. ++++ . + ++
T Consensus 225 di~kala~GAd~V~vGs~f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~~~~ry~~~~~~~~~~~~eg~~~~v~~~g 304 (366)
T 4fo4_A 225 DISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRIAYKG 304 (366)
T ss_dssp HHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC---------------CCCSBCEEEEECCB
T ss_pred HHHHHHHcCCCEEEEChHhhcCCCCCchhhhhCCceeEEeeccccHHHHhcccccchhccccccccccCCCcEEecCCCC
Confidence 999999999999999998842 2221 0 0 01
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 019244 297 GVRRVLEMLREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 297 ~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
.+.+++.+|...|+..|.++|+++|+||++.
T Consensus 305 ~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~ 335 (366)
T 4fo4_A 305 HLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 335 (366)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCcccHHHHHhC
Confidence 2789999999999999999999999999864
No 21
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.88 E-value=1.3e-21 Score=193.83 Aligned_cols=141 Identities=22% Similarity=0.351 Sum_probs=119.0
Q ss_pred cHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchhhHHHHHHHHHHccC-CCcEE
Q 019244 187 SWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~~~~~l~~i~~~~~~-~~~vi 258 (344)
.++.+++|++.+ ++||++..+.|.+.++.++++|||+|.|.-.+|.- ...|.|++.++.+++++.+. .+|||
T Consensus 309 v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvI 388 (556)
T 4af0_A 309 QIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCI 388 (556)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEE
T ss_pred HHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEE
Confidence 467899999998 69999999999999999999999999998766641 23478999999999887643 69999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHH--------------------HHHhhh--------------------------
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRPV--------------------VYSLAA-------------------------- 292 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~~--------------------l~~~~~-------------------------- 292 (344)
+||||++..|++|||++|||+||+|+.| +|++++
T Consensus 389 ADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~~~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~~~~~s~ 468 (556)
T 4af0_A 389 ADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRGSASGKRSILGLDNAAT 468 (556)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHTTC------------CCSCSSE
T ss_pred ecCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCcEEEECCEEEEeecccccHHHHHhcccCCcccccccccccccch
Confidence 9999999999999999999999999987 122221
Q ss_pred -------------cChH-------HHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 019244 293 -------------EGEK-------GVRRVLEMLREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 293 -------------~G~~-------~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
+|.+ .+.+++.+|...|+..|.++|+++|.||+..
T Consensus 469 dRyfq~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~~ 523 (556)
T 4af0_A 469 ARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSC 523 (556)
T ss_dssp EECCCBSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred hhhcccccccccCCccEEeccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHHh
Confidence 0100 2789999999999999999999999999864
No 22
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.86 E-value=3.9e-20 Score=186.32 Aligned_cols=141 Identities=24% Similarity=0.339 Sum_probs=115.0
Q ss_pred cHHHHHHHHHhcC-CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchhhHHHHHHHHHHccC-CCcEE
Q 019244 187 SWKDVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~-~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~~~~~l~~i~~~~~~-~~~vi 258 (344)
.++.++++++.++ +|+++|.+.+.++++.+.++|+|+|+++.++|+. ..++.|++.++.++++.++. ++|||
T Consensus 284 v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVI 363 (511)
T 3usb_A 284 VIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVI 363 (511)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEE
T ss_pred hhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEE
Confidence 3468999999984 8999999999999999999999999996655542 23567889999888776643 69999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHH--------------------HHHhhh----------------------cChH
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRPV--------------------VYSLAA----------------------EGEK 296 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~~--------------------l~~~~~----------------------~G~~ 296 (344)
++|||+++.|++|++++||++|++|++| +|++++ +|.+
T Consensus 364 a~GGI~~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~ 443 (511)
T 3usb_A 364 ADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIE 443 (511)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC--------------------------------
T ss_pred EeCCCCCHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcE
Confidence 9999999999999999999999999997 344433 1222
Q ss_pred H-------HHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 019244 297 G-------VRRVLEMLREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 297 ~-------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
+ +.++++.|..+|+..|.++|++++.+|+..
T Consensus 444 ~~~~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~~ 481 (511)
T 3usb_A 444 GRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLREN 481 (511)
T ss_dssp --CBCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHhC
Confidence 2 778999999999999999999999999864
No 23
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.84 E-value=3.5e-20 Score=175.68 Aligned_cols=133 Identities=23% Similarity=0.242 Sum_probs=109.3
Q ss_pred cHHHHHHHHHhcCCcEEEEee--cCHHH----HHHHHHcC-CcEEEEccCCCC--CCC-----------------Cc---
Q 019244 187 SWKDVKWLQTITKLPILVKGV--LTAED----ARIAVQAG-AAGIIVSNHGAR--QLD-----------------YV--- 237 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v--~~~~~----a~~~~~~G-~d~I~v~~~gG~--~~~-----------------~g--- 237 (344)
.++.++++++.+++||++|.. .+.++ ++.+.++| +|+|+++|+.++ ..+ .|
T Consensus 148 ~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~ 227 (314)
T 2e6f_A 148 MRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYI 227 (314)
T ss_dssp HHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGG
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccc
Confidence 456899999988999999987 35555 78889999 999999986531 000 11
Q ss_pred -hhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHh
Q 019244 238 -PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALS 316 (344)
Q Consensus 238 -~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~ 316 (344)
+.+++.+.++++.+ +++|||++|||+|+.|+.+++++|||+|++||++++ +|+ .+++.+.++++.+|...
T Consensus 228 ~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~----~~p----~~~~~i~~~l~~~~~~~ 298 (314)
T 2e6f_A 228 LPTALANVNAFYRRC-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQE----EGP----GIFTRLEDELLEIMARK 298 (314)
T ss_dssp HHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHH----HCT----THHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHh----cCc----HHHHHHHHHHHHHHHHc
Confidence 22467788888877 589999999999999999999999999999999996 244 37889999999999999
Q ss_pred CCCCHhhhcccc
Q 019244 317 GCRSLKEITRDH 328 (344)
Q Consensus 317 G~~~i~~l~~~~ 328 (344)
|++|++|+++..
T Consensus 299 g~~~i~~~~g~~ 310 (314)
T 2e6f_A 299 GYRTLEEFRGRV 310 (314)
T ss_dssp TCCSSTTTTTCC
T ss_pred CCCCHHHHhchH
Confidence 999999998653
No 24
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.84 E-value=2.5e-19 Score=179.66 Aligned_cols=141 Identities=23% Similarity=0.393 Sum_probs=116.6
Q ss_pred cHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchhhHHHHHHHHHHccC-CCcEE
Q 019244 187 SWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~~~~~l~~i~~~~~~-~~~vi 258 (344)
.++.++++++.+ ++||+++.+.+.++++.+.++|+|+|+|++.+|.. ..+|.|+++++.++++.++. ++|||
T Consensus 257 ~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVI 336 (490)
T 4avf_A 257 VIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLI 336 (490)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEE
T ss_pred HHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEE
Confidence 357899999998 78999999999999999999999999997554432 34567899999999887643 79999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHHH--------------------HHhhh--------------------------
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAA-------------------------- 292 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~~l--------------------~~~~~-------------------------- 292 (344)
++|||+++.|+.|++++||++|++|+.|+ |++++
T Consensus 337 a~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~~ 416 (490)
T 4avf_A 337 ADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLV 416 (490)
T ss_dssp EESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC--------------------------------
T ss_pred EeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhccccccccccc
Confidence 99999999999999999999999999873 34332
Q ss_pred -cChH-------HHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 019244 293 -EGEK-------GVRRVLEMLREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 293 -~G~~-------~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
+|.+ .+.+++.+|..+|+..|.++|+++|+||++.
T Consensus 417 ~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 417 PEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp -------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred CCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 1111 3668999999999999999999999999875
No 25
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.83 E-value=2.1e-20 Score=188.14 Aligned_cols=144 Identities=20% Similarity=0.277 Sum_probs=121.3
Q ss_pred cHHHHHHHHHhc-C-CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCC-----C-CCCchhhHHHHHHHHHHccC-----
Q 019244 187 SWKDVKWLQTIT-K-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR-----Q-LDYVPATIMALEEVVKATQG----- 253 (344)
Q Consensus 187 ~~~~i~~i~~~~-~-~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~-----~-~~~g~~~~~~l~~i~~~~~~----- 253 (344)
.++.++++++.+ + +|++++.+.+.++++.+.++|+|+|+|+.+||. . .++|.|++.++.++.+.+..
T Consensus 270 ~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~ 349 (503)
T 1me8_A 270 QKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEET 349 (503)
T ss_dssp HHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhc
Confidence 467899999988 5 899999999999999999999999999655542 2 34688999999999876532
Q ss_pred --CCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH--------------------HHhhhcCh----------------
Q 019244 254 --RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEGE---------------- 295 (344)
Q Consensus 254 --~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l--------------------~~~~~~G~---------------- 295 (344)
++|||++|||+++.|++|||++||++|++|++|+ |++++.|+
T Consensus 350 ~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~ 429 (503)
T 1me8_A 350 GIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSF 429 (503)
T ss_dssp SEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC-------------
T ss_pred CCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccccccceec
Confidence 5999999999999999999999999999999995 44433221
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHhCCCCHhhhcc-ccee
Q 019244 296 -----------KGVRRVLEMLREEFELAMALSGCRSLKEITR-DHIV 330 (344)
Q Consensus 296 -----------~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~-~~l~ 330 (344)
.++.++++.|..||+..|.++|++++++|++ ..++
T Consensus 430 ~eg~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~ 476 (503)
T 1me8_A 430 EEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSKAKIT 476 (503)
T ss_dssp -CCCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCCEE
T ss_pred ccceeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHhCCCEE
Confidence 2578999999999999999999999999987 4444
No 26
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.82 E-value=8.3e-19 Score=176.01 Aligned_cols=141 Identities=23% Similarity=0.352 Sum_probs=117.4
Q ss_pred cHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchhhHHHHHHHHHHccC-CCcEE
Q 019244 187 SWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~~~~~l~~i~~~~~~-~~~vi 258 (344)
.++.++++++.+ ++||+++.+.+.+.++.+.++|+|+|+|++.+|.. ..+|.|++.++.++.+.++. ++|||
T Consensus 259 ~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVI 338 (496)
T 4fxs_A 259 VLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVI 338 (496)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEE
T ss_pred HHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEE
Confidence 346799999998 79999999999999999999999999998654432 13467889999999886632 69999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHHHH--------------------Hhhh------------------------cC
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAA------------------------EG 294 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~~l~--------------------~~~~------------------------~G 294 (344)
++|||+++.|+.|++++||++|++|+.|+. ++++ +|
T Consensus 339 a~GGI~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~eg 418 (496)
T 4fxs_A 339 ADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEG 418 (496)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCCSB
T ss_pred EeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccCCc
Confidence 999999999999999999999999998842 2221 01
Q ss_pred h-------HHHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 019244 295 E-------KGVRRVLEMLREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 295 ~-------~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
. ..+.+++.+|..+|+..|.++|+++|+||++.
T Consensus 419 ~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~ 458 (496)
T 4fxs_A 419 IEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 458 (496)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 0 13779999999999999999999999999854
No 27
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.81 E-value=2.9e-19 Score=179.17 Aligned_cols=139 Identities=23% Similarity=0.320 Sum_probs=113.2
Q ss_pred HHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC-------CCCchhhHHHHHHHHHHccC-CCcEEE
Q 019244 188 WKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ-------LDYVPATIMALEEVVKATQG-RIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~-------~~~g~~~~~~l~~i~~~~~~-~~~via 259 (344)
++.++++++.+++|+++|++.++++++.+. |+|+|.+ +.|+.. ..+|.+++.++.++.+.... ++|||+
T Consensus 257 L~~I~~l~~~~~vpvi~k~v~~~~~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia 333 (486)
T 2cu0_A 257 IKSMKEMRQKVDADFIVGNIANPKAVDDLT--FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIA 333 (486)
T ss_dssp HHHHHHHHHTCCSEEEEEEECCHHHHTTCT--TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhCCccccCCcCCHHHHHHhh--CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEe
Confidence 467899999999999999999999998888 9999999 444432 34567777777666554321 699999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchHHHH--------------------HhhhcC----------------------hHH
Q 019244 260 DGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAAEG----------------------EKG 297 (344)
Q Consensus 260 ~GGIr~g~dv~kalalGAd~V~ig~~~l~--------------------~~~~~G----------------------~~~ 297 (344)
+|||+++.|++|||++|||+|++|++|+. ++++.| ++|
T Consensus 334 ~GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g 413 (486)
T 2cu0_A 334 DGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEG 413 (486)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCB
T ss_pred cCCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccccccccccc
Confidence 99999999999999999999999999983 221111 133
Q ss_pred ----------HHHHHHHHHHHHHHHHHHhCCCCHhhhcccce
Q 019244 298 ----------VRRVLEMLREEFELAMALSGCRSLKEITRDHI 329 (344)
Q Consensus 298 ----------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l 329 (344)
+..+++.|..+|+..|.++|++++.+|+....
T Consensus 414 ~~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~~~ 455 (486)
T 2cu0_A 414 VEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGE 455 (486)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCC
T ss_pred eEEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhhCC
Confidence 88999999999999999999999999986543
No 28
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.81 E-value=1e-18 Score=165.34 Aligned_cols=133 Identities=22% Similarity=0.219 Sum_probs=108.2
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHH----HHHHHHcCCcEEEEccCCC--CCCC--------------C---ch---
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGA--RQLD--------------Y---VP--- 238 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~----a~~~~~~G~d~I~v~~~gG--~~~~--------------~---g~--- 238 (344)
.++.++++++.+++||++|... +.++ ++.+.++|+|+|+++|+.+ ...+ + |+
T Consensus 146 ~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~ 225 (311)
T 1jub_A 146 TEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIK 225 (311)
T ss_dssp HHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccccccc
Confidence 4677999999889999999874 4333 7888899999999998642 1111 0 22
Q ss_pred -hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhC
Q 019244 239 -ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSG 317 (344)
Q Consensus 239 -~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G 317 (344)
.+++.+.++++.+++++|||++|||+|++|+.+++++|||+|++||++++ +|+ .+++.+.++++.+|...|
T Consensus 226 ~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~----~~p----~~~~~i~~~l~~~l~~~g 297 (311)
T 1jub_A 226 PTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK----EGP----AIFDRIIKELEEIMNQKG 297 (311)
T ss_dssp HHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH----HCT----HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh----cCc----HHHHHHHHHHHHHHHHcC
Confidence 23567788877765589999999999999999999999999999999997 244 378899999999999999
Q ss_pred CCCHhhhccc
Q 019244 318 CRSLKEITRD 327 (344)
Q Consensus 318 ~~~i~~l~~~ 327 (344)
++|++|+++.
T Consensus 298 ~~si~e~~g~ 307 (311)
T 1jub_A 298 YQSIADFHGK 307 (311)
T ss_dssp CCSGGGTTTC
T ss_pred CCCHHHHhCh
Confidence 9999999865
No 29
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.80 E-value=1.1e-18 Score=189.00 Aligned_cols=133 Identities=19% Similarity=0.272 Sum_probs=108.4
Q ss_pred CCcHHHHHHHHHhcCCcEEEEeecC----HHHHHHHHHcCCcEEEEccC--------------------CCCCCC--Cch
Q 019244 185 SLSWKDVKWLQTITKLPILVKGVLT----AEDARIAVQAGAAGIIVSNH--------------------GARQLD--YVP 238 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v~~----~~~a~~~~~~G~d~I~v~~~--------------------gG~~~~--~g~ 238 (344)
.+.++.++++++.+++||++|+..+ .+.++.+.++|+|+|+++|+ |.+... .|+
T Consensus 689 ~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~ 768 (1025)
T 1gte_A 689 ELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGT 768 (1025)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESG
T ss_pred HHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcc
Confidence 4457789999999999999999753 35589999999999999863 221111 122
Q ss_pred hh----HHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHH
Q 019244 239 AT----IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMA 314 (344)
Q Consensus 239 ~~----~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~ 314 (344)
+. +..+.++++.+ +++|||++|||+|+.|+.++|++||++|++||++++ .+. .+++.+.+||+.+|.
T Consensus 769 ~~~~~~~~~v~~v~~~~-~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~----~~~----~~~~~~~~~l~~~l~ 839 (1025)
T 1gte_A 769 AIRPIALRAVTTIARAL-PGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQN----QDF----TVIQDYCTGLKALLY 839 (1025)
T ss_dssp GGHHHHHHHHHHHHHHS-TTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT----SCT----THHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHc-CCCCEEEecCcCCHHHHHHHHHcCCCEEEEeecccc----CCc----cHHHHHHHHHHHHHH
Confidence 22 46788888777 469999999999999999999999999999999986 133 467889999999999
Q ss_pred HhCCCCHhhhcc
Q 019244 315 LSGCRSLKEITR 326 (344)
Q Consensus 315 ~~G~~~i~~l~~ 326 (344)
..|+++++++..
T Consensus 840 ~~G~~~i~~l~g 851 (1025)
T 1gte_A 840 LKSIEELQGWDG 851 (1025)
T ss_dssp HTTCGGGTTSBT
T ss_pred HcCCCCHHHHhC
Confidence 999999999986
No 30
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.80 E-value=4e-18 Score=163.78 Aligned_cols=132 Identities=20% Similarity=0.143 Sum_probs=104.9
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHH----HHHHHHcC-CcEEEEccCCC---------CC-------CCC---c---
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAED----ARIAVQAG-AAGIIVSNHGA---------RQ-------LDY---V--- 237 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~----a~~~~~~G-~d~I~v~~~gG---------~~-------~~~---g--- 237 (344)
..+.++++++.+++||+||+.. +.++ ++.+.++| +|+|+++|+-| +. ..+ |
T Consensus 181 ~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i 260 (354)
T 4ef8_A 181 MRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYV 260 (354)
T ss_dssp HHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGG
T ss_pred HHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCC
Confidence 4567999999999999999974 3332 34455887 99999877531 10 011 2
Q ss_pred -hhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHh
Q 019244 238 -PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALS 316 (344)
Q Consensus 238 -~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~ 316 (344)
+..++.+.++++.. .++|||++|||+|++|+.+++.+|||+|++||++++. |+. +++.+.++|+.+|...
T Consensus 261 ~p~a~~~i~~v~~~~-~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~----GP~----~~~~i~~~l~~~m~~~ 331 (354)
T 4ef8_A 261 LPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEE----GPS----IFERLTSELLGVMAKK 331 (354)
T ss_dssp HHHHHHHHHHHHHHC-TTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHH----CTT----HHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhC-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHh----CHH----HHHHHHHHHHHHHHHc
Confidence 23567788888773 4799999999999999999999999999999999873 553 7788999999999999
Q ss_pred CCCCHhhhccc
Q 019244 317 GCRSLKEITRD 327 (344)
Q Consensus 317 G~~~i~~l~~~ 327 (344)
|+++++|+++.
T Consensus 332 G~~si~el~G~ 342 (354)
T 4ef8_A 332 RYQTLDEFRGK 342 (354)
T ss_dssp TCCSGGGTTTC
T ss_pred CCCCHHHHHHH
Confidence 99999999876
No 31
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.78 E-value=1.7e-17 Score=156.46 Aligned_cols=131 Identities=23% Similarity=0.285 Sum_probs=104.7
Q ss_pred CcHHHHHHHHHhcCCcEEEEeec---C-HHHHHHHHHcCCcEEEEccC-------CCCCC------C---Cchh----hH
Q 019244 186 LSWKDVKWLQTITKLPILVKGVL---T-AEDARIAVQAGAAGIIVSNH-------GARQL------D---YVPA----TI 241 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v~---~-~~~a~~~~~~G~d~I~v~~~-------gG~~~------~---~g~~----~~ 241 (344)
+.++.++++++.+++||++|... + .+.++.+.++|+|+|+++|. +.+.. . .+++ .+
T Consensus 151 ~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~ 230 (311)
T 1ep3_A 151 VAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVAL 230 (311)
T ss_dssp HHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHH
Confidence 34678999999889999999863 3 45589999999999999872 21100 0 1222 24
Q ss_pred HHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCH
Q 019244 242 MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSL 321 (344)
Q Consensus 242 ~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i 321 (344)
+.+.++++.+ ++|||++|||++++|+.+++++|||+|++||+++. +++ +++.++++++.+|...|++|+
T Consensus 231 ~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~-----~p~----~~~~i~~~l~~~~~~~g~~~~ 299 (311)
T 1ep3_A 231 KLIHQVAQDV--DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA-----DPF----VCPKIIDKLPELMDQYRIESL 299 (311)
T ss_dssp HHHHHHHTTC--SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHH-----CTT----HHHHHHHHHHHHHHHTTCSCH
T ss_pred HHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHc-----CcH----HHHHHHHHHHHHHHHcCCCCH
Confidence 6667776655 79999999999999999999999999999999987 333 677889999999999999999
Q ss_pred hhhccc
Q 019244 322 KEITRD 327 (344)
Q Consensus 322 ~~l~~~ 327 (344)
+|+++.
T Consensus 300 ~~~~g~ 305 (311)
T 1ep3_A 300 ESLIQE 305 (311)
T ss_dssp HHHHHH
T ss_pred HHHhCh
Confidence 999764
No 32
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.78 E-value=2.2e-18 Score=172.97 Aligned_cols=142 Identities=24% Similarity=0.405 Sum_probs=119.4
Q ss_pred cHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchhhHHHHHHHHHHccC-CCcEE
Q 019244 187 SWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~~~~~l~~i~~~~~~-~~~vi 258 (344)
.|+.++++++.+ ++||+++.+.+.++++.+.++|+|+|+++++||.. ..++.|+...++++.+.++. ++|||
T Consensus 265 ~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvi 344 (494)
T 1vrd_A 265 VIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPII 344 (494)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEE
Confidence 678899999999 79999999999999999999999999998887631 12467888888888877543 79999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHHHH--------------------Hhhh-----cC--------------hHH--
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAA-----EG--------------EKG-- 297 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~~l~--------------------~~~~-----~G--------------~~~-- 297 (344)
++|||+++.|+.|++++|||+|++||+|+. ++++ .| .+|
T Consensus 345 a~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~g~~ 424 (494)
T 1vrd_A 345 ADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGIE 424 (494)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------CB
T ss_pred EECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCCcce
Confidence 999999999999999999999999999962 2221 00 233
Q ss_pred --------HHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 019244 298 --------VRRVLEMLREEFELAMALSGCRSLKEITRDH 328 (344)
Q Consensus 298 --------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 328 (344)
+.++++.+..||+..|.++|++++.+|++..
T Consensus 425 ~~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~ 463 (494)
T 1vrd_A 425 GMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQEKA 463 (494)
T ss_dssp CCEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHC
T ss_pred EccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHHHHHhhC
Confidence 7899999999999999999999999998654
No 33
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.76 E-value=3.8e-18 Score=172.14 Aligned_cols=140 Identities=23% Similarity=0.316 Sum_probs=110.6
Q ss_pred CcHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchhhH---HHHHHHHHHccCCC
Q 019244 186 LSWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATI---MALEEVVKATQGRI 255 (344)
Q Consensus 186 ~~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~~~---~~l~~i~~~~~~~~ 255 (344)
+.++.++++++.+ ++||++|.+.+.++|+.+.++|+|+|++++++|.. .++|.++. ..+.++++.+ ++
T Consensus 282 ~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~i 359 (514)
T 1jcn_A 282 YQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GV 359 (514)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TC
T ss_pred hHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC--CC
Confidence 3468899999999 89999999999999999999999999997654421 22454444 4445554443 79
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH--------------------Hhhhc---------------------C
Q 019244 256 PVFLDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAAE---------------------G 294 (344)
Q Consensus 256 ~via~GGIr~g~dv~kalalGAd~V~ig~~~l~--------------------~~~~~---------------------G 294 (344)
|||++|||+++.|+.|++++||++|++||+|+. +++.. +
T Consensus 360 pVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~ 439 (514)
T 1jcn_A 360 PIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKI 439 (514)
T ss_dssp CEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC----------------------------------------
T ss_pred CEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhcccccccee
Confidence 999999999999999999999999999998853 22110 2
Q ss_pred hHHH----------HHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 019244 295 EKGV----------RRVLEMLREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 295 ~~~v----------~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
++|+ .++++.|..||+..|.++|+++++||++.
T Consensus 440 ~~gv~~~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 440 AQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cccceecCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHhh
Confidence 2444 89999999999999999999999999874
No 34
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.75 E-value=4.1e-17 Score=156.29 Aligned_cols=132 Identities=17% Similarity=0.180 Sum_probs=102.4
Q ss_pred HHHHHHHHHhcCCcEEEEeec--C-HHHHHHHHHcCCcEEEEcc---C--------CCC-CC-----C---Cchh----h
Q 019244 188 WKDVKWLQTITKLPILVKGVL--T-AEDARIAVQAGAAGIIVSN---H--------GAR-QL-----D---YVPA----T 240 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v~--~-~~~a~~~~~~G~d~I~v~~---~--------gG~-~~-----~---~g~~----~ 240 (344)
.+.++++++.+++||+||... + .+.++.+.++|+++|++.| . ..+ .+ . .|++ +
T Consensus 182 ~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a 261 (345)
T 3oix_A 182 DQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTA 261 (345)
T ss_dssp HHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHH
T ss_pred HHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHH
Confidence 456888888889999999974 3 3457778888887664322 1 111 01 0 1232 3
Q ss_pred HHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCC
Q 019244 241 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRS 320 (344)
Q Consensus 241 ~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~ 320 (344)
++.+.++++.+++++|||++|||+|++|+.+++++|||+|++||+|++. |+ .+++.+.++|+.+|...|+++
T Consensus 262 ~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~----gP----~~~~~i~~~L~~~l~~~G~~s 333 (345)
T 3oix_A 262 LANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQE----GP----QIFKRITKELXAIMTEKGYET 333 (345)
T ss_dssp HHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH----CT----HHHHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhc----Ch----HHHHHHHHHHHHHHHHcCCCC
Confidence 5678888877766899999999999999999999999999999997763 55 377889999999999999999
Q ss_pred Hhhhccc
Q 019244 321 LKEITRD 327 (344)
Q Consensus 321 i~~l~~~ 327 (344)
++|+++.
T Consensus 334 i~e~~G~ 340 (345)
T 3oix_A 334 LEDFRGK 340 (345)
T ss_dssp GGGTTTC
T ss_pred HHHHHhH
Confidence 9999875
No 35
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.74 E-value=4.9e-17 Score=155.49 Aligned_cols=214 Identities=17% Similarity=0.200 Sum_probs=135.0
Q ss_pred CCCcceeecccccccceeecccccccccCChhhHHHHHHHHHcCCccc-----c----------------CCH-------
Q 019244 58 KIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMV-----Y----------------KDR------- 109 (344)
Q Consensus 58 ~vd~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~~-----~----------------~d~------- 109 (344)
.+|++++++|.+++.||+++++ + ++.++ +++++++.|+.++ . .|.
T Consensus 42 ~~~l~~~i~g~~l~npi~~aag-~----~~~~~--~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g 114 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAAG-L----DKDGE--CIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMG 114 (336)
T ss_dssp CCCCCEEETTEEESSSEEECTT-S----STTCC--CHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCC
T ss_pred CCCCCeEECCEEcCCCcEeCcc-c----CCcHH--HHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCC
Confidence 4899999999999999999963 2 23333 7777888888761 0 001
Q ss_pred ---HHHHHHHHHHHHcCCc-EEEeccCCcc---ccccHHHHHhhcC-CCCcccccccccccccccccccchhhHHHHhhc
Q 019244 110 ---NVVAQLVRRAERAGFK-AIALTVDTPR---LGRREADIKNRFT-LPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQ 181 (344)
Q Consensus 110 ---~~~~~~i~~a~~ag~~-~l~~tvd~~~---~g~r~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (344)
.-.+.+++++++.+++ .+.+++.... ......+....+. ...+ .+.++.+... ...++ ....
T Consensus 115 ~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g-----~d~iein~~s-P~~~g-~~~~--- 184 (336)
T 1f76_A 115 FNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAY-----AGYIAINISS-PNTPG-LRTL--- 184 (336)
T ss_dssp CCBCCHHHHHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGG-----CSEEEEECCC-SSSTT-GGGG---
T ss_pred CCCcCHHHHHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhcc-----CCEEEEEccC-CCCCC-cccc---
Confidence 1124566666666554 5666653211 0011222222211 0001 1111100000 00011 1111
Q ss_pred CCCCCcHHHHHHHHHhc---------CCcEEEEeec--CHH----HHHHHHHcCCcEEEEccCC-CCC---------CCC
Q 019244 182 IDRSLSWKDVKWLQTIT---------KLPILVKGVL--TAE----DARIAVQAGAAGIIVSNHG-ARQ---------LDY 236 (344)
Q Consensus 182 ~~~~~~~~~i~~i~~~~---------~~PvivK~v~--~~~----~a~~~~~~G~d~I~v~~~g-G~~---------~~~ 236 (344)
.+..+.++.++++++.+ ++||++|... +.+ .++.+.++|+|+|+++|++ +++ ..+
T Consensus 185 ~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~g 264 (336)
T 1f76_A 185 QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTG 264 (336)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSS
T ss_pred cCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCC
Confidence 12445678899999988 8999999873 333 3789999999999999874 322 011
Q ss_pred ---ch----hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 237 ---VP----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 237 ---g~----~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
|+ .+++.+.++++.+++++|||++|||+|+.|+.++|++|||+|++||++++
T Consensus 265 g~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 265 GLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred CcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 22 24567888888776689999999999999999999999999999999997
No 36
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.73 E-value=1.5e-17 Score=166.79 Aligned_cols=144 Identities=16% Similarity=0.248 Sum_probs=120.5
Q ss_pred cHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC------CCCchhhHHHHHHHHHHcc-CCCcEE
Q 019244 187 SWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~------~~~g~~~~~~l~~i~~~~~-~~~~vi 258 (344)
.|+.++++++.+ ++|++.+++.+.++++.+.++|+|+|.+++.+|+. ..++.|+++.+.+++.... .++|||
T Consensus 261 ~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvi 340 (491)
T 1zfj_A 261 VLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTII 340 (491)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEE
Confidence 567899999999 89999999999999999999999999998765542 2356778888888877543 379999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHHHH--------------------HhhhcC----------------------hH
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAAEG----------------------EK 296 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~~l~--------------------~~~~~G----------------------~~ 296 (344)
++|||+++.|++|++++||++|++|++|+. +++..+ .+
T Consensus 341 a~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~~~~ 420 (491)
T 1zfj_A 341 ADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPE 420 (491)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCS
T ss_pred eeCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccccccCcC
Confidence 999999999999999999999999999972 211100 22
Q ss_pred H----------HHHHHHHHHHHHHHHHHHhCCCCHhhhccccee
Q 019244 297 G----------VRRVLEMLREEFELAMALSGCRSLKEITRDHIV 330 (344)
Q Consensus 297 ~----------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~ 330 (344)
| +.++++.|..||+..|.++|++++.+|+.....
T Consensus 421 g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~~~ 464 (491)
T 1zfj_A 421 GIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHENAQF 464 (491)
T ss_dssp BCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHCCE
T ss_pred cceEecCcCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhcCcE
Confidence 3 899999999999999999999999999866443
No 37
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.73 E-value=3.6e-16 Score=151.02 Aligned_cols=132 Identities=23% Similarity=0.323 Sum_probs=105.7
Q ss_pred HHHHHHHHh-------cCCcEEEEeec--CH----HHHHHHHHcCCcEEEEccCC-CCC---------CCC---ch----
Q 019244 189 KDVKWLQTI-------TKLPILVKGVL--TA----EDARIAVQAGAAGIIVSNHG-ARQ---------LDY---VP---- 238 (344)
Q Consensus 189 ~~i~~i~~~-------~~~PvivK~v~--~~----~~a~~~~~~G~d~I~v~~~g-G~~---------~~~---g~---- 238 (344)
+.++.+++. +++||+||+.. +. +.|+.+.++|+|+|+++|+. ++. ..+ |+
T Consensus 203 ~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p 282 (367)
T 3zwt_A 203 RLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRD 282 (367)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHH
T ss_pred HHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccch
Confidence 345555543 68999999973 33 34788999999999999864 221 012 22
Q ss_pred hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCC
Q 019244 239 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGC 318 (344)
Q Consensus 239 ~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~ 318 (344)
.+++.+.++++.+++++|||++|||+|++|+.+++++|||+|++||++++. |+ .+++.+.++|+.+|...|+
T Consensus 283 ~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~----gP----~~~~~i~~~l~~~m~~~G~ 354 (367)
T 3zwt_A 283 LSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFW----GP----PVVGKVKRELEALLKEQGF 354 (367)
T ss_dssp HHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH----CT----HHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhc----Cc----HHHHHHHHHHHHHHHHcCC
Confidence 245788888888877899999999999999999999999999999999873 55 3778899999999999999
Q ss_pred CCHhhhcccc
Q 019244 319 RSLKEITRDH 328 (344)
Q Consensus 319 ~~i~~l~~~~ 328 (344)
++++|+.+..
T Consensus 355 ~~i~e~~G~~ 364 (367)
T 3zwt_A 355 GGVTDAIGAD 364 (367)
T ss_dssp SSHHHHTTGG
T ss_pred CCHHHhhCcc
Confidence 9999998753
No 38
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.72 E-value=3.7e-16 Score=152.27 Aligned_cols=122 Identities=25% Similarity=0.322 Sum_probs=102.1
Q ss_pred CCc-EEEEeec--CH----HHHHHHHHcCCcEEEEccCCCCCCC--------C---ch----hhHHHHHHHHHHccCCCc
Q 019244 199 KLP-ILVKGVL--TA----EDARIAVQAGAAGIIVSNHGARQLD--------Y---VP----ATIMALEEVVKATQGRIP 256 (344)
Q Consensus 199 ~~P-vivK~v~--~~----~~a~~~~~~G~d~I~v~~~gG~~~~--------~---g~----~~~~~l~~i~~~~~~~~~ 256 (344)
++| |+||+.. +. +.|+.+.++|+|+|+++|+...+.+ + |+ .+++.+.++++.+++++|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 689 9999974 32 3478899999999999998654322 1 22 345788899888877899
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 019244 257 VFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 328 (344)
Q Consensus 257 via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 328 (344)
||++|||+|++|+.+++++|||+|++||++++. |+. +++.+.++|+.+|...|+++++|+++..
T Consensus 348 IIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~----GP~----~~~~i~~~L~~~l~~~G~~si~e~~G~~ 411 (415)
T 3i65_A 348 IIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GMK----SAVQIKRELNHLLYQRGYYNLKEAIGRK 411 (415)
T ss_dssp EEECSSCCSHHHHHHHHHHTEEEEEESHHHHHH----GGG----HHHHHHHHHHHHHHHTTCSSSTTTTTTT
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----CHH----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 999999999999999999999999999999974 443 6788999999999999999999998753
No 39
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.69 E-value=1.5e-15 Score=146.17 Aligned_cols=131 Identities=19% Similarity=0.112 Sum_probs=93.9
Q ss_pred HHHHHHHHhcCCcEEEEeec--CH----HHHHHHHHcC-CcEEEEccCCCC-------------------CCCCchhhH-
Q 019244 189 KDVKWLQTITKLPILVKGVL--TA----EDARIAVQAG-AAGIIVSNHGAR-------------------QLDYVPATI- 241 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~--~~----~~a~~~~~~G-~d~I~v~~~gG~-------------------~~~~g~~~~- 241 (344)
+.++++++..+.|+.+|... +. ..+..+.+.+ ++.+...++-.. +...|++..
T Consensus 183 ~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~ 262 (354)
T 3tjx_A 183 QCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLP 262 (354)
T ss_dssp HHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHH
T ss_pred HHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHH
Confidence 45788888889999999873 22 1233344443 444443332110 001244433
Q ss_pred ---HHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCC
Q 019244 242 ---MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGC 318 (344)
Q Consensus 242 ---~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~ 318 (344)
..+.++++.. .++|||++|||.|++|++++|.+||++||++|.++|. |+. +++.+.+||+.+|...|+
T Consensus 263 ~a~~~v~~~~~~~-~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~----GP~----~~~~I~~~L~~~L~~~G~ 333 (354)
T 3tjx_A 263 TALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEE----GPS----IFERLTSELLGVMAKKRY 333 (354)
T ss_dssp HHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHH----CTT----HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhc-CCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhc----Cch----HHHHHHHHHHHHHHHcCC
Confidence 3445555544 3799999999999999999999999999999999873 653 678899999999999999
Q ss_pred CCHhhhcccc
Q 019244 319 RSLKEITRDH 328 (344)
Q Consensus 319 ~~i~~l~~~~ 328 (344)
+|++|+++..
T Consensus 334 ~si~e~~G~~ 343 (354)
T 3tjx_A 334 QTLDEFRGKV 343 (354)
T ss_dssp CSGGGTTTCC
T ss_pred CCHHHHhChh
Confidence 9999998764
No 40
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.68 E-value=1.4e-16 Score=151.38 Aligned_cols=142 Identities=23% Similarity=0.277 Sum_probs=109.9
Q ss_pred CCCCcHHHHHHHHHhcCCcEEEEeec------CHHHHHHHHHcCCcEEEEccCCCCCCC--CchhhHHHHHHHHHHccCC
Q 019244 183 DRSLSWKDVKWLQTITKLPILVKGVL------TAEDARIAVQAGAAGIIVSNHGARQLD--YVPATIMALEEVVKATQGR 254 (344)
Q Consensus 183 ~~~~~~~~i~~i~~~~~~PvivK~v~------~~~~a~~~~~~G~d~I~v~~~gG~~~~--~g~~~~~~l~~i~~~~~~~ 254 (344)
++.+.++.++++++.+++||++|... +.+.++.+.++|+|+|+|+ |++..+ .+++.++.+.++++ +
T Consensus 110 ~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~--g~~~~~~~~~~~~~~~i~~i~~----~ 183 (318)
T 1vhn_A 110 DLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIH--TRTVVQSFTGRAEWKALSVLEK----R 183 (318)
T ss_dssp CHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEE--SSCTTTTTSSCCCGGGGGGSCC----S
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEc--CCCccccCCCCcCHHHHHHHHc----C
Confidence 34557889999999999999999642 2377999999999999995 444322 34455555555443 7
Q ss_pred CcEEEecCCCCHHHHHHHHH-cCCCEEEEchHHHH-----Hhhhc----Ch---HHHHHHHHHHHHHHHHHHHHhCCC-C
Q 019244 255 IPVFLDGGVRRGTDVFKALA-LGASGIFIGRPVVY-----SLAAE----GE---KGVRRVLEMLREEFELAMALSGCR-S 320 (344)
Q Consensus 255 ~~via~GGIr~g~dv~kala-lGAd~V~ig~~~l~-----~~~~~----G~---~~v~~~l~~l~~el~~~m~~~G~~-~ 320 (344)
+|||++|||+|++|+.++++ .|||+|++||+++. ..... |. .++.+.++.+.++++..|.+.|.+ .
T Consensus 184 ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 263 (318)
T 1vhn_A 184 IPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKA 263 (318)
T ss_dssp SCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred CeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHhcCchHH
Confidence 99999999999999999999 89999999998753 22211 42 467788999999999999999975 7
Q ss_pred Hhhhccccee
Q 019244 321 LKEITRDHIV 330 (344)
Q Consensus 321 i~~l~~~~l~ 330 (344)
+.++++....
T Consensus 264 ~~~~~~~~~~ 273 (318)
T 1vhn_A 264 VVEMRKFLAG 273 (318)
T ss_dssp HHHHHTTHHH
T ss_pred HHHHHHHHHH
Confidence 8888876544
No 41
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.63 E-value=5.6e-15 Score=145.63 Aligned_cols=123 Identities=24% Similarity=0.333 Sum_probs=101.5
Q ss_pred cCCc-EEEEeec--CHHH----HHHHHHcCCcEEEEccCCCCCCC--------C---chh----hHHHHHHHHHHccCCC
Q 019244 198 TKLP-ILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLD--------Y---VPA----TIMALEEVVKATQGRI 255 (344)
Q Consensus 198 ~~~P-vivK~v~--~~~~----a~~~~~~G~d~I~v~~~gG~~~~--------~---g~~----~~~~l~~i~~~~~~~~ 255 (344)
.++| |++|+.. +.++ |+.+.++|+|+|+++|+.....+ + |++ +++.+.++++.+++++
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 4689 9999873 4334 88999999999999997653222 1 222 4577888888886689
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcccc
Q 019244 256 PVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 328 (344)
Q Consensus 256 ~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 328 (344)
|||++|||+|+.|+.++|++|||+|++||++++. |+ .+++.+.+++..+|...|+++++|+.+..
T Consensus 375 PVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~----gP----~l~~~i~~~l~~~l~~~G~~si~e~~G~~ 439 (443)
T 1tv5_A 375 PIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GM----KSAVQIKRELNHLLYQRGYYNLKEAIGRK 439 (443)
T ss_dssp CEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHH----GG----GHHHHHHHHHHHHHHHHTCSSSGGGTTTT
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----Ch----HHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 9999999999999999999999999999999973 34 36788999999999999999999998764
No 42
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.54 E-value=1e-13 Score=131.98 Aligned_cols=197 Identities=20% Similarity=0.247 Sum_probs=126.5
Q ss_pred Ccceeecc-cccccceeecccccccccCChhhHHHHHHHHHcCCcc----ccCCHHHHHHHHHHHHHcCCcEEEeccCCc
Q 019244 60 DMNTTVLG-FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIM----VYKDRNVVAQLVRRAERAGFKAIALTVDTP 134 (344)
Q Consensus 60 d~st~l~g-~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~----~~~d~~~~~~~i~~a~~ag~~~l~~tvd~~ 134 (344)
.++|.|.. ..++.||+.+||++ .. +..+|.++.++|... -..+++...+.++++++..-..+.+++...
T Consensus 14 ~~~t~~~~~l~~~~Pii~apM~g--vs----~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~ 87 (326)
T 3bo9_A 14 TVRTRVTDLLEIEHPILMGGMAW--AG----TPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILV 87 (326)
T ss_dssp CCCCHHHHHHTCSSSEEECCCTT--TS----CHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETT
T ss_pred eecchhHHhcCCCCCEEECCCCC--CC----CHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 34444432 46678999999984 33 346999999998644 234677777778877754212222222111
Q ss_pred cccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCHHHHH
Q 019244 135 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDAR 214 (344)
Q Consensus 135 ~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~~a~ 214 (344)
.. .....+.... ....+.+. ...++ ..+.++++++ .++|++++ +.+.++++
T Consensus 88 ~~-~~~~~~~~~~------------~~g~d~V~-----------l~~g~---p~~~~~~l~~-~g~~v~~~-v~s~~~a~ 138 (326)
T 3bo9_A 88 SP-WADDLVKVCI------------EEKVPVVT-----------FGAGN---PTKYIRELKE-NGTKVIPV-VASDSLAR 138 (326)
T ss_dssp ST-THHHHHHHHH------------HTTCSEEE-----------EESSC---CHHHHHHHHH-TTCEEEEE-ESSHHHHH
T ss_pred CC-CHHHHHHHHH------------HCCCCEEE-----------ECCCC---cHHHHHHHHH-cCCcEEEE-cCCHHHHH
Confidence 00 0011110000 00000000 00111 2345777776 47888764 68899999
Q ss_pred HHHHcCCcEEEEcc--CCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhh
Q 019244 215 IAVQAGAAGIIVSN--HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 292 (344)
Q Consensus 215 ~~~~~G~d~I~v~~--~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~ 292 (344)
.+.++|+|+|++++ +||+. +..+++..++++++.+ ++|||++|||+++.|+.+++++||++|++||.|+....+
T Consensus 139 ~a~~~GaD~i~v~g~~~GG~~--G~~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 139 MVERAGADAVIAEGMESGGHI--GEVTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVES 214 (326)
T ss_dssp HHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSC
T ss_pred HHHHcCCCEEEEECCCCCccC--CCccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccc
Confidence 99999999999987 45542 1346888899988876 799999999999999999999999999999999876444
Q ss_pred cCh
Q 019244 293 EGE 295 (344)
Q Consensus 293 ~G~ 295 (344)
.+.
T Consensus 215 ~~~ 217 (326)
T 3bo9_A 215 DVH 217 (326)
T ss_dssp CSC
T ss_pred ccc
Confidence 333
No 43
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.50 E-value=8.2e-13 Score=125.74 Aligned_cols=106 Identities=17% Similarity=0.246 Sum_probs=85.2
Q ss_pred HHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccC--CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 188 WKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~--gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
++.++++++. ++|++.+ +.+.++++.+.++|+|+|++++. ||+.-....++++.++++++.+ ++||+++|||++
T Consensus 108 ~~~~~~l~~~-gi~vi~~-v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~ 183 (328)
T 2gjl_A 108 GEHIAEFRRH-GVKVIHK-CTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFAD 183 (328)
T ss_dssp HHHHHHHHHT-TCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCS
T ss_pred HHHHHHHHHc-CCCEEee-CCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCC
Confidence 5678888875 8898865 68899999999999999999763 4442112346788888887765 799999999999
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHHhhhcChHH
Q 019244 266 GTDVFKALALGASGIFIGRPVVYSLAAEGEKG 297 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~ 297 (344)
+.|+.+++++||++|++||+|+....+.+.+.
T Consensus 184 ~~~v~~al~~GAdgV~vGs~~~~~~e~~~~~~ 215 (328)
T 2gjl_A 184 GRGLVAALALGADAINMGTRFLATRECPIHPA 215 (328)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHTSSSSCSCHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHcCccccccHH
Confidence 99999999999999999999987654444443
No 44
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.48 E-value=9.3e-13 Score=125.64 Aligned_cols=183 Identities=21% Similarity=0.259 Sum_probs=119.5
Q ss_pred ecccccccceeecccccccccCChhhHHHHHHHHHcCCc-cc---cCCHHHHHHHHHHHHHcCCcEEEeccCC--ccccc
Q 019244 65 VLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTI-MV---YKDRNVVAQLVRRAERAGFKAIALTVDT--PRLGR 138 (344)
Q Consensus 65 l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~-~~---~~d~~~~~~~i~~a~~ag~~~l~~tvd~--~~~g~ 138 (344)
+|| +..||+.+||++ ... ..++.++.++|.. ++ ..+++...+.++++++..-..+.+++-. |.+
T Consensus 8 ~l~--~~~Pii~apM~g--~s~----~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~-- 77 (332)
T 2z6i_A 8 LLK--IDYPIFQGGMAW--VAD----GDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFV-- 77 (332)
T ss_dssp HHT--CSSSEEECCCTT--TCC----HHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHCCSCEEEEECTTSTTH--
T ss_pred HhC--CCCCEEeCCCCC--CCc----HHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEecCCCCCH--
Confidence 445 577999999983 333 3588888898863 32 3467766677777665321122233221 111
Q ss_pred cHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHH
Q 019244 139 READIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDARIAVQ 218 (344)
Q Consensus 139 r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~ 218 (344)
....+... ....+.+.. ..+ ...+.++++++ .++|+++| +.+.++++.+.+
T Consensus 78 -~~~~~~a~------------~~g~d~V~~-----------~~g---~p~~~i~~l~~-~g~~v~~~-v~~~~~a~~~~~ 128 (332)
T 2z6i_A 78 -EDIVDLVI------------EEGVKVVTT-----------GAG---NPSKYMERFHE-AGIIVIPV-VPSVALAKRMEK 128 (332)
T ss_dssp -HHHHHHHH------------HTTCSEEEE-----------CSS---CGGGTHHHHHH-TTCEEEEE-ESSHHHHHHHHH
T ss_pred -HHHHHHHH------------HCCCCEEEE-----------CCC---ChHHHHHHHHH-cCCeEEEE-eCCHHHHHHHHH
Confidence 00000000 000000000 001 11345777776 48999988 578899999999
Q ss_pred cCCcEEEEccC--CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHh
Q 019244 219 AGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSL 290 (344)
Q Consensus 219 ~G~d~I~v~~~--gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~ 290 (344)
+|+|+|++++. ||+. +..++++.++++++.+ ++|||++|||.++.|+.+++++|||+|++||+|+...
T Consensus 129 ~GaD~i~v~g~~~GG~~--g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~ 198 (332)
T 2z6i_A 129 IGADAVIAEGMEAGGHI--GKLTTMTLVRQVATAI--SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAK 198 (332)
T ss_dssp TTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBT
T ss_pred cCCCEEEEECCCCCCCC--CCccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCc
Confidence 99999999764 4431 1356778889988877 7999999999999999999999999999999998754
No 45
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.47 E-value=2e-12 Score=124.18 Aligned_cols=142 Identities=18% Similarity=0.211 Sum_probs=100.3
Q ss_pred CCcHHHHHHHHHhcCCcEEEEeec----------CHHHHHHHHHcCCcEEEEccCC---CCC----CCCchhhHHHHHHH
Q 019244 185 SLSWKDVKWLQTITKLPILVKGVL----------TAEDARIAVQAGAAGIIVSNHG---ARQ----LDYVPATIMALEEV 247 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v~----------~~~~a~~~~~~G~d~I~v~~~g---G~~----~~~g~~~~~~l~~i 247 (344)
.+..+.++++++.+++||++|... +.+.++.+.++|+|+|+|++.- |.. ....+..++.+.++
T Consensus 112 ~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~i 191 (350)
T 3b0p_A 112 ARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRL 191 (350)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHH
Confidence 445678999999889999999852 1355789999999999996521 110 00112357788888
Q ss_pred HHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhh--------hcC---hHHHHHHHHHHHHHHHHHHHHh
Q 019244 248 VKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA--------AEG---EKGVRRVLEMLREEFELAMALS 316 (344)
Q Consensus 248 ~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~--------~~G---~~~v~~~l~~l~~el~~~m~~~ 316 (344)
++.++ ++|||++|||+|++|+.++++ |||+|++||+++..-. ..| .....+.++.+.+.++..+. .
T Consensus 192 k~~~~-~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~ 268 (350)
T 3b0p_A 192 KGDFP-QLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVL-K 268 (350)
T ss_dssp HHHCT-TSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHH-H
T ss_pred HHhCC-CCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH-c
Confidence 87763 799999999999999999998 9999999999864210 012 11244566777777776666 3
Q ss_pred CCCCHhhhccccee
Q 019244 317 GCRSLKEITRDHIV 330 (344)
Q Consensus 317 G~~~i~~l~~~~l~ 330 (344)
|. .+..++++..+
T Consensus 269 g~-~~~~~~kh~~~ 281 (350)
T 3b0p_A 269 GT-PPWAVLRHMLN 281 (350)
T ss_dssp TC-CHHHHHTTSTT
T ss_pred Cc-cHHHHHHHHHH
Confidence 65 57788776544
No 46
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.41 E-value=4.2e-12 Score=122.81 Aligned_cols=204 Identities=23% Similarity=0.207 Sum_probs=122.3
Q ss_pred ccceeecccccccccCChhhHHHHHHHHHcCCcc----ccCCHHHHHHHHHHHHHcCCcEEEeccCCccc---ccc-HH-
Q 019244 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIM----VYKDRNVVAQLVRRAERAGFKAIALTVDTPRL---GRR-EA- 141 (344)
Q Consensus 71 ~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~----~~~d~~~~~~~i~~a~~ag~~~l~~tvd~~~~---g~r-~~- 141 (344)
..||+.+||++ ... ...+|.++.++|... -+.+++...+.++++++.--+.+.+++-.+.. ... ..
T Consensus 10 ~~Pii~apMag-gvs----~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~ 84 (369)
T 3bw2_A 10 PLPIVQAPMAG-GVS----VPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEV 84 (369)
T ss_dssp SSSEEECCCTT-TTS----CHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHH
T ss_pred cCCEEeCCCCC-CCC----cHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHH
Confidence 78999999975 223 346999999998644 24578878788888776322222222211110 000 00
Q ss_pred ------HHHhhcCCCCcccccccccccccccccccchhhHH----HHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCHH
Q 019244 142 ------DIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAA----YVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAE 211 (344)
Q Consensus 142 ------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~ 211 (344)
.....++.+.... .+. ....+. .....+.+ .+.. ......++.++++++. ++|++++ +.+.+
T Consensus 85 ~~~~l~~~~~~~g~~~~~~--~~~--~~~~~~-~~~~~~~~~g~~~V~~-~~g~~~~~~i~~~~~~-g~~v~~~-v~t~~ 156 (369)
T 3bw2_A 85 YAHQLAGEAAWYETELGDP--DGG--RDDGYD-AKLAVLLDDPVPVVSF-HFGVPDREVIARLRRA-GTLTLVT-ATTPE 156 (369)
T ss_dssp HHHHTHHHHHHTTCCCCCS--CSC--SSTTHH-HHHHHHHHSCCSEEEE-ESSCCCHHHHHHHHHT-TCEEEEE-ESSHH
T ss_pred HHHHHHHHHHHcCCCcCcc--ccc--ccccHH-HHHHHHHhcCCCEEEE-eCCCCcHHHHHHHHHC-CCeEEEE-CCCHH
Confidence 0011122221110 000 000000 00000000 0000 0112246788888874 7888765 67899
Q ss_pred HHHHHHHcCCcEEEEccC--CCC---CCCCc------hhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEE
Q 019244 212 DARIAVQAGAAGIIVSNH--GAR---QLDYV------PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGI 280 (344)
Q Consensus 212 ~a~~~~~~G~d~I~v~~~--gG~---~~~~g------~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V 280 (344)
+++.+.++|+|+|.+++. ||+ ..+.. .+++..++++++.+ ++|||++|||.++.++.+++++|||+|
T Consensus 157 ~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~iPViaaGGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 157 EARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--DIPVVAAGGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp HHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc--CceEEEECCCCCHHHHHHHHHcCCCEE
Confidence 999999999999999763 332 21111 23478888888766 799999999999999999999999999
Q ss_pred EEchHHHHH
Q 019244 281 FIGRPVVYS 289 (344)
Q Consensus 281 ~ig~~~l~~ 289 (344)
++||.|+..
T Consensus 235 ~vGs~~~~~ 243 (369)
T 3bw2_A 235 QLGTAFLAT 243 (369)
T ss_dssp EESHHHHTS
T ss_pred EEChHHhCC
Confidence 999999864
No 47
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.22 E-value=3.9e-11 Score=136.42 Aligned_cols=214 Identities=17% Similarity=0.204 Sum_probs=130.3
Q ss_pred eeecccC-CCCCCCcceeecccccccceeecccccccccCChhhHHHHHHHHHcCCccc-----cCCHHHHHHHHHHHHH
Q 019244 48 FRPRILI-DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMV-----YKDRNVVAQLVRRAER 121 (344)
Q Consensus 48 l~pr~l~-~~~~vd~st~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~~-----~~d~~~~~~~i~~a~~ 121 (344)
|.||..+ .-.+++++|.|...--..||+.+||+++. . +-.||.|++++|.... +.+++..++.++++++
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg~~PIi~a~M~~~v-s----~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~ 632 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLGVPPVMVAGMTPTT-V----PWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEK 632 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHTSCSEEECCCTTTT-C----SHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGG
T ss_pred cCCcceecCCCceecchhhhhccccceEEecCCCCcc-c----cHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHh
Confidence 4566553 22346677665332116899999998432 2 3359999999998763 3578888888888876
Q ss_pred cC--CcEEEeccCC--ccccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHH-HHHHHH
Q 019244 122 AG--FKAIALTVDT--PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKD-VKWLQT 196 (344)
Q Consensus 122 ag--~~~l~~tvd~--~~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~i~~ 196 (344)
.. -+.+.+++-. |.......++.... ...|.. +. + .....+. ...+. ++.+++
T Consensus 633 ~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~-~~~gv~-----------i~-----g---v~~~~G~--p~~e~~~~~l~~ 690 (2060)
T 2uva_G 633 AIPPGRGITVNLIYVNPRAMGWQIPLLGRL-RADGVP-----------IE-----G---LTIGAGV--PSIEVANEYIQT 690 (2060)
T ss_dssp GSCTTCCEEEEEETTCTTHHHHHHHHHHHH-HTTTCC-----------EE-----E---EEEESSC--CCHHHHHHHHHH
T ss_pred hcccCCCeEecccccCcccchhHHHHHHHH-HHcCCC-----------cc-----e---EeecCCC--CCHHHHHHHHHH
Confidence 53 1233333322 11000000000000 000000 00 0 0000111 13333 444444
Q ss_pred hcCCcEEEEeecCHHHHHHH----HHcCCcEEE---Ecc--CCCC-C-CCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 197 ITKLPILVKGVLTAEDARIA----VQAGAAGII---VSN--HGAR-Q-LDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 197 ~~~~PvivK~v~~~~~a~~~----~~~G~d~I~---v~~--~gG~-~-~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
.+++++ +.+.+..+++.+ .++|+|+|+ +.| .||+ . .+...+++..+++|++.+ ++|||++|||.+
T Consensus 691 -~gi~~i-~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~--~ipviaaGGI~~ 766 (2060)
T 2uva_G 691 -LGIRHI-SFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCS--NIVLVAGSGFGG 766 (2060)
T ss_dssp -SCCSEE-EECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTST--TEEEEEESSCCS
T ss_pred -cCCeEE-EecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHc--CCCEEEeCCCCC
Confidence 588887 556666776666 999999999 654 2333 2 234467788899998766 799999999999
Q ss_pred HHHHHHHH-----------HcCCCEEEEchHHHHHhhh
Q 019244 266 GTDVFKAL-----------ALGASGIFIGRPVVYSLAA 292 (344)
Q Consensus 266 g~dv~kal-----------alGAd~V~ig~~~l~~~~~ 292 (344)
+.|++++| +||||+|+||+.|+....+
T Consensus 767 g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea 804 (2060)
T 2uva_G 767 SEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEA 804 (2060)
T ss_dssp HHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTS
T ss_pred HHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCC
Confidence 99999999 9999999999999865433
No 48
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.06 E-value=2.2e-09 Score=96.04 Aligned_cols=97 Identities=20% Similarity=0.256 Sum_probs=79.5
Q ss_pred HHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC--CCC--chhhHHHHHHHHHHccCCCcEEEecC
Q 019244 188 WKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ--LDY--VPATIMALEEVVKATQGRIPVFLDGG 262 (344)
Q Consensus 188 ~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~--~~~--g~~~~~~l~~i~~~~~~~~~via~GG 262 (344)
.+.++++++.+ +.++++ .+.++++++.+.++|+|+|.++++|.+. .+. ..+.++.+.++++.+ ++||+++||
T Consensus 107 ~~~i~~~~~~~~~~~v~~-~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GG 183 (223)
T 1y0e_A 107 DELVSYIRTHAPNVEIMA-DIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGN 183 (223)
T ss_dssp HHHHHHHHHHCTTSEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESS
T ss_pred HHHHHHHHHhCCCceEEe-cCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecC
Confidence 45689999987 566654 5688999999999999999887765432 122 355677888888776 799999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 263 VRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 263 Ir~g~dv~kalalGAd~V~ig~~~l 287 (344)
|++++|+.+++++|||+|++|++++
T Consensus 184 I~~~~~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 184 VITPDMYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEEChHHc
Confidence 9999999999999999999999975
No 49
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.03 E-value=1.7e-09 Score=97.55 Aligned_cols=94 Identities=24% Similarity=0.274 Sum_probs=75.0
Q ss_pred cHHHHHHHHHhcCCcEEEEee-----cCHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-----~~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
..+.++++++.++ |+++|.+ ++.++ ++.+.++|+|+|.++. |. ..|..+++.+..+++.+++++||
T Consensus 104 ~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tst-g~---~~gga~~~~i~~v~~~v~~~ipV 178 (225)
T 1mzh_A 104 VVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTST-GF---APRGTTLEEVRLIKSSAKGRIKV 178 (225)
T ss_dssp HHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC-SC---SSSCCCHHHHHHHHHHHTTSSEE
T ss_pred HHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC-CC---CCCCCCHHHHHHHHHHhCCCCcE
Confidence 3456889999888 9999994 45443 6788999999996654 21 12335778888888877668999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchH
Q 019244 258 FLDGGVRRGTDVFKALALGASGIFIGRP 285 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalGAd~V~ig~~ 285 (344)
+++|||+|+.|+.+++.+||+.|++++.
T Consensus 179 ia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 179 KASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred EEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 9999999999999999999999888865
No 50
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.00 E-value=2.2e-08 Score=95.70 Aligned_cols=101 Identities=18% Similarity=0.195 Sum_probs=80.4
Q ss_pred CcHHHHHHHHHhcCCcEEEEeecC------------HHHHHHHHHcCCcEEEEccCCCCC--CCCch-hhHHHHHHHHHH
Q 019244 186 LSWKDVKWLQTITKLPILVKGVLT------------AEDARIAVQAGAAGIIVSNHGARQ--LDYVP-ATIMALEEVVKA 250 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v~~------------~~~a~~~~~~G~d~I~v~~~gG~~--~~~g~-~~~~~l~~i~~~ 250 (344)
|..+.++.+|+.++.||.+|.... .+.++.+.++|+|+|.|++.+-.. ...++ ..++.+.++++.
T Consensus 196 ~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~ 275 (340)
T 3gr7_A 196 FLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRRE 275 (340)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHH
Confidence 456789999999999999999732 345788999999999998532111 11122 246677788877
Q ss_pred ccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 251 TQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 251 ~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
+ ++|||+.|||++.+++.++|..| ||+|++||+++.
T Consensus 276 ~--~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~la 312 (340)
T 3gr7_A 276 A--DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLR 312 (340)
T ss_dssp T--TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred c--CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHh
Confidence 7 79999999999999999999999 999999999985
No 51
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.99 E-value=1.8e-08 Score=96.11 Aligned_cols=101 Identities=18% Similarity=0.179 Sum_probs=79.9
Q ss_pred CcHHHHHHHHHhcCCcEEEEeec--------CH----HHHHHHHHcCCcEEEEccCCCC-C-CCCch-hhHHHHHHHHHH
Q 019244 186 LSWKDVKWLQTITKLPILVKGVL--------TA----EDARIAVQAGAAGIIVSNHGAR-Q-LDYVP-ATIMALEEVVKA 250 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v~--------~~----~~a~~~~~~G~d~I~v~~~gG~-~-~~~g~-~~~~~l~~i~~~ 250 (344)
+..+.++.+|+.++.||.+|... +. +.++.+.++|+|+|.+++.... + ...++ ..++.+.++++.
T Consensus 196 ~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~ 275 (338)
T 1z41_A 196 FLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQ 275 (338)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHH
Confidence 45678999999999999999853 33 3467889999999999763211 1 11222 245677788877
Q ss_pred ccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 251 TQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 251 ~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
+ ++||++.|||+++.++.++|+.| ||+|++||+++.
T Consensus 276 ~--~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~ 312 (338)
T 1z41_A 276 A--DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLR 312 (338)
T ss_dssp H--CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred C--CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHh
Confidence 7 79999999999999999999999 999999999985
No 52
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.97 E-value=1e-08 Score=92.77 Aligned_cols=97 Identities=13% Similarity=0.101 Sum_probs=76.6
Q ss_pred cHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCC-CCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 187 SWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~-~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
..+.++.+++. ++++++ .+.+.++++++.++|+|.|.+.++|.+.. ....++++.++++++. ++|||++|||.+
T Consensus 118 l~~~i~~~~~~-g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~---~ipvIA~GGI~t 192 (232)
T 3igs_A 118 VEALLARIHHH-HLLTMA-DCSSVDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA---GCRVIAEGRYNS 192 (232)
T ss_dssp HHHHHHHHHHT-TCEEEE-ECCSHHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT---TCCEEEESCCCS
T ss_pred HHHHHHHHHHC-CCEEEE-eCCCHHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc---CCcEEEECCCCC
Confidence 34557777664 777766 46899999999999999997765543211 1234577888888764 799999999999
Q ss_pred HHHHHHHHHcCCCEEEEchHHHH
Q 019244 266 GTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~~~l~ 288 (344)
++|+.+++++||++|++|+.++.
T Consensus 193 ~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 193 PALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHC
T ss_pred HHHHHHHHHcCCCEEEEehHhcC
Confidence 99999999999999999999874
No 53
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.94 E-value=1.1e-08 Score=92.34 Aligned_cols=97 Identities=14% Similarity=0.088 Sum_probs=76.6
Q ss_pred cHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCC-CCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 187 SWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~-~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
..+.++.+++. ++++++ .+.+.++++++.++|+|.|.+.++|.+.. ....++++.++++++. ++|||+.|||.|
T Consensus 118 l~~~i~~~~~~-g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~---~ipvIA~GGI~t 192 (229)
T 3q58_A 118 IDSLLTRIRLH-GLLAMA-DCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA---GCRVIAEGRYNT 192 (229)
T ss_dssp HHHHHHHHHHT-TCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT---TCCEEEESSCCS
T ss_pred HHHHHHHHHHC-CCEEEE-ecCCHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc---CCCEEEECCCCC
Confidence 34567777764 777776 46899999999999999997765553211 1234577888887653 799999999999
Q ss_pred HHHHHHHHHcCCCEEEEchHHHH
Q 019244 266 GTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~~~l~ 288 (344)
++|+.+++++||++|++|+.++.
T Consensus 193 ~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 193 PALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHC
T ss_pred HHHHHHHHHcCCCEEEEchHhcC
Confidence 99999999999999999999874
No 54
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.91 E-value=4.6e-09 Score=94.98 Aligned_cols=95 Identities=27% Similarity=0.185 Sum_probs=70.4
Q ss_pred cHHHHHHHHHhcCCcEEEEee-----cCHHHHHH----HHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTITKLPILVKGV-----LTAEDARI----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-----~~~~~a~~----~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
..++|+.+++..+- .++|.+ ++.++..+ +.++|+|+|+.|+.-+ .+..+++.+..+++.++++++|
T Consensus 129 v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~----~ggAt~~dv~lmr~~vg~~v~V 203 (239)
T 3ngj_A 129 VEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFG----THGATPEDVKLMKDTVGDKALV 203 (239)
T ss_dssp HHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHGGGSEE
T ss_pred HHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCC----CCCCCHHHHHHHHHhhCCCceE
Confidence 44578888888752 356665 56666444 5899999999984211 1234566666666666778999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchHH
Q 019244 258 FLDGGVRRGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalGAd~V~ig~~~ 286 (344)
.++||||+..|+++.+.+||+.++..+..
T Consensus 204 KasGGIrt~~da~~~i~aGA~riGtS~~~ 232 (239)
T 3ngj_A 204 KAAGGIRTFDDAMKMINNGASRIGASAGI 232 (239)
T ss_dssp EEESSCCSHHHHHHHHHTTEEEEEESCHH
T ss_pred EEeCCCCCHHHHHHHHHhcccceecccHH
Confidence 99999999999999999999998877643
No 55
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.91 E-value=6.8e-08 Score=92.53 Aligned_cols=101 Identities=19% Similarity=0.228 Sum_probs=79.5
Q ss_pred CcHHHHHHHHHhc--CCcEEEEeec--------CHHH----HHHHHHcCCcEEEEccCCCCC---CCCch-hhHHHHHHH
Q 019244 186 LSWKDVKWLQTIT--KLPILVKGVL--------TAED----ARIAVQAGAAGIIVSNHGARQ---LDYVP-ATIMALEEV 247 (344)
Q Consensus 186 ~~~~~i~~i~~~~--~~PvivK~v~--------~~~~----a~~~~~~G~d~I~v~~~gG~~---~~~g~-~~~~~l~~i 247 (344)
|..+.++.+|+.+ +.||.+|... +.++ ++.+.++|+|+|.+++.+-.. ...++ ..++.+.++
T Consensus 204 ~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~i 283 (349)
T 3hgj_A 204 FPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAV 283 (349)
T ss_dssp HHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHH
Confidence 4567899999999 6899999873 4444 778889999999998522111 11122 245677778
Q ss_pred HHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 248 VKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 248 ~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
++.+ ++||++.|||+++.++.++|+.| ||+|++||+++.
T Consensus 284 r~~~--~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 284 RKRV--GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp HHHH--CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred HHHc--CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHh
Confidence 7776 79999999999999999999999 999999999985
No 56
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.87 E-value=1.8e-08 Score=93.24 Aligned_cols=97 Identities=21% Similarity=0.224 Sum_probs=70.6
Q ss_pred cHHHHHHHHHhcCCcEEEEee-----cCHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-----~~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
..++|+.+++..+-| ++|.+ ++.++ ++.+.++|+|+|..|..-+. ....+..+..++++.+..+.+++|
T Consensus 160 v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~-~GAT~edv~lmr~~v~~~g~~v~V 237 (288)
T 3oa3_A 160 VFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNG-PGASIENVSLMSAVCDSLQSETRV 237 (288)
T ss_dssp HHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSS-CCCCHHHHHHHHHHHHHSSSCCEE
T ss_pred HHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCC-CCCCHHHHHHHHHHHHHhCCCceE
Confidence 446788899887666 47876 46666 57788999999999842111 011234455555555443568999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchH
Q 019244 258 FLDGGVRRGTDVFKALALGASGIFIGRP 285 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalGAd~V~ig~~ 285 (344)
.++||||+.+|+.+++.+||+.++..+.
T Consensus 238 KAAGGIrt~edAl~mi~aGA~RiGtS~g 265 (288)
T 3oa3_A 238 KASGGIRTIEDCVKMVRAGAERLGASAG 265 (288)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred EEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 9999999999999999999998877664
No 57
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.80 E-value=3.4e-08 Score=90.21 Aligned_cols=93 Identities=24% Similarity=0.192 Sum_probs=70.1
Q ss_pred HHHHHHHHHhcCCcEEEEee-----cCHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 188 WKDVKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v-----~~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
.++|..+++..+ ...+|.+ ++.++ ++.+.++|+|+|..|+.-+ .+..+++.+..+++.++++++|.
T Consensus 146 ~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~----~~GAT~edV~lm~~~vg~~v~VK 220 (260)
T 3r12_A 146 YEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFG----TGGATAEDVHLMKWIVGDEMGVK 220 (260)
T ss_dssp HHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSS----SCCCCHHHHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCCC----CCCCCHHHHHHHHHHhCCCceEE
Confidence 457888888774 3456876 45554 4567899999999985211 22356666666666777799999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchH
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRP 285 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~ 285 (344)
++||||+..|+.+.+.+||+-++..+.
T Consensus 221 aAGGIrt~~~al~mi~aGA~RiGtS~g 247 (260)
T 3r12_A 221 ASGGIRTFEDAVKMIMYGADRIGTSSG 247 (260)
T ss_dssp EESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred EeCCCCCHHHHHHHHHcCCceeecchH
Confidence 999999999999999999998877654
No 58
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.77 E-value=1.8e-07 Score=90.07 Aligned_cols=101 Identities=19% Similarity=0.137 Sum_probs=78.6
Q ss_pred CcHHHHHHHHHhc--CCcEEEEeec---------CHHH----HHHHHHcCCcEEEEccCCCC---CCCCch-hhHHHHHH
Q 019244 186 LSWKDVKWLQTIT--KLPILVKGVL---------TAED----ARIAVQAGAAGIIVSNHGAR---QLDYVP-ATIMALEE 246 (344)
Q Consensus 186 ~~~~~i~~i~~~~--~~PvivK~v~---------~~~~----a~~~~~~G~d~I~v~~~gG~---~~~~g~-~~~~~l~~ 246 (344)
|..+.++.+|+.+ +.||.+|... +.++ ++.+.++|+|+|.+++.+-. ....++ ...+.+..
T Consensus 210 ~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ 289 (363)
T 3l5l_A 210 FLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAER 289 (363)
T ss_dssp HHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHH
Confidence 4567899999998 5899999862 2333 77889999999999863211 111122 24566777
Q ss_pred HHHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 247 VVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 247 i~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
+++.+ ++||++.|||++..++.++|..| ||+|++||+++.
T Consensus 290 ir~~~--~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 290 VRREA--KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp HHHHH--TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHc--CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh
Confidence 77777 79999999999999999999999 999999999985
No 59
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.73 E-value=7.1e-08 Score=86.88 Aligned_cols=97 Identities=19% Similarity=0.246 Sum_probs=75.2
Q ss_pred cHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEE--EEccC-CCCCCCCchhhHHHHHHHHHHccCCCcEEEecC
Q 019244 187 SWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGI--IVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGG 262 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I--~v~~~-gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GG 262 (344)
..+.++.+++.+ +.++++ .+.++++++.+.++|+|+| .+.+. .+.+ ....+.++.+.++++. ++||+++||
T Consensus 120 ~~~~i~~i~~~~~~~~v~~-~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~-~~~~~~~~~i~~~~~~---~ipvia~GG 194 (234)
T 1yxy_A 120 IASFIRQVKEKYPNQLLMA-DISTFDEGLVAHQAGIDFVGTTLSGYTPYSR-QEAGPDVALIEALCKA---GIAVIAEGK 194 (234)
T ss_dssp HHHHHHHHHHHCTTCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTTSC-CSSSCCHHHHHHHHHT---TCCEEEESC
T ss_pred HHHHHHHHHHhCCCCeEEE-eCCCHHHHHHHHHcCCCEEeeeccccCCCCc-CCCCCCHHHHHHHHhC---CCCEEEECC
Confidence 356799999887 566655 4678999999999999999 55442 1221 1123456777777653 699999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 263 VRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 263 Ir~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
|+|.+|+.+++++|||+|++|++++.
T Consensus 195 I~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 195 IHSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp CCSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred CCCHHHHHHHHHCCCCEEEEchHHhC
Confidence 99999999999999999999998763
No 60
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.72 E-value=9.3e-08 Score=86.07 Aligned_cols=95 Identities=21% Similarity=0.217 Sum_probs=71.2
Q ss_pred cHHHHHHHHHhcCCcEEEEee-----c----CHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccC
Q 019244 187 SWKDVKWLQTITKLPILVKGV-----L----TAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG 253 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-----~----~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~ 253 (344)
..++|..+++..+ ...+|.+ + +.++ ++.+.++|+|+|..|..-+ ..+..+++.+..+++.+++
T Consensus 114 v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~---~~~gAt~edv~lm~~~v~~ 189 (231)
T 3ndo_A 114 VSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFH---PSGGASVQAVEIMARTVGE 189 (231)
T ss_dssp HHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCC---TTCSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCC---CCCCCCHHHHHHHHHHhCC
Confidence 3457888888875 3456876 5 6555 3567799999999985211 0123566777777777777
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCCEEEEchH
Q 019244 254 RIPVFLDGGVRRGTDVFKALALGASGIFIGRP 285 (344)
Q Consensus 254 ~~~via~GGIr~g~dv~kalalGAd~V~ig~~ 285 (344)
+++|.++||||+.+|+.+.+.+||+-++..+.
T Consensus 190 ~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~g 221 (231)
T 3ndo_A 190 RLGVKASGGIRTAEQAAAMLDAGATRLGLSGS 221 (231)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTTCSEEEESSH
T ss_pred CceEEEeCCCCCHHHHHHHHHhcchhcccchH
Confidence 99999999999999999999999998776653
No 61
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.72 E-value=1.6e-07 Score=85.14 Aligned_cols=119 Identities=22% Similarity=0.265 Sum_probs=81.0
Q ss_pred HHHHHHHHHhcCCcEEEEeecC-------HHHHHHHHHcCCcEEEEccC---------------CC---------CC---
Q 019244 188 WKDVKWLQTITKLPILVKGVLT-------AEDARIAVQAGAAGIIVSNH---------------GA---------RQ--- 233 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v~~-------~~~a~~~~~~G~d~I~v~~~---------------gG---------~~--- 233 (344)
.+.++++++.+++||.+....+ .+.++.+.++|+|+|++..- |- +.
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~ 148 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDER 148 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHH
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHH
Confidence 5678888887778877765433 36677888888888887531 10 00
Q ss_pred -------CC-----------Cc------hhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 234 -------LD-----------YV------PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 234 -------~~-----------~g------~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
.+ .| +...+.+.++++.. ++||+++|||++++|+.+++.+|||.|.+|+.++..
T Consensus 149 ~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 149 LKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp HHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhh
Confidence 01 01 22355677777665 699999999999999999999999999999999876
Q ss_pred hhhcChHHHHHHHHHHHHHH
Q 019244 290 LAAEGEKGVRRVLEMLREEF 309 (344)
Q Consensus 290 ~~~~G~~~v~~~l~~l~~el 309 (344)
...+. +.+.++++.+++.|
T Consensus 227 ~~~~~-~~~~~~~~~~~~~~ 245 (248)
T 1geq_A 227 IGEKG-REATEFLKKKVEEL 245 (248)
T ss_dssp HHHHG-GGCHHHHHHHHHHH
T ss_pred HhhCh-HHHHHHHHHHHHHh
Confidence 42112 44555555555444
No 62
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.71 E-value=6.6e-07 Score=78.77 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=70.7
Q ss_pred CcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 186 LSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
+.-+.++..++ .++|++. ++.|+++++.+.++|+|.|.+... ....++.+.++++.++ ++||+++|||.
T Consensus 92 ~~~~~~~~~~~-~g~~vi~-g~~t~~e~~~a~~~Gad~vk~~~~-------~~~g~~~~~~l~~~~~-~~pvia~GGI~- 160 (205)
T 1wa3_A 92 LDEEISQFCKE-KGVFYMP-GVMTPTELVKAMKLGHTILKLFPG-------EVVGPQFVKAMKGPFP-NVKFVPTGGVN- 160 (205)
T ss_dssp CCHHHHHHHHH-HTCEEEC-EECSHHHHHHHHHTTCCEEEETTH-------HHHHHHHHHHHHTTCT-TCEEEEBSSCC-
T ss_pred CCHHHHHHHHH-cCCcEEC-CcCCHHHHHHHHHcCCCEEEEcCc-------cccCHHHHHHHHHhCC-CCcEEEcCCCC-
Confidence 34445555554 6999987 678899999999999999988431 0123455666655443 79999999996
Q ss_pred HHHHHHHHHcCCCEEEEchHHHH
Q 019244 266 GTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~~~l~ 288 (344)
..++.+++.+||++|.+|+.++.
T Consensus 161 ~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 161 LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp TTTHHHHHHHTCSCEEECHHHHC
T ss_pred HHHHHHHHHCCCCEEEECccccC
Confidence 78999999999999999999874
No 63
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.71 E-value=3.6e-07 Score=88.01 Aligned_cols=98 Identities=15% Similarity=0.075 Sum_probs=76.2
Q ss_pred CCcHHHHHHHHHhcCC-cEEEEeec-----------CHHH----HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHH
Q 019244 185 SLSWKDVKWLQTITKL-PILVKGVL-----------TAED----ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEV 247 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~-PvivK~v~-----------~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i 247 (344)
.+..+.++.+|+.++- ||.+|... +.++ ++.+.++|+|+|.+++.. .+..+ ...+.+.++
T Consensus 212 r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~---~~~~~~~~~~~~~~i 288 (365)
T 2gou_A 212 RFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVD---WDDAPDTPVSFKRAL 288 (365)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCB---TTBCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC---cCCCCCccHHHHHHH
Confidence 3456789999998843 99999874 2233 788999999999998631 11111 124567778
Q ss_pred HHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 248 VKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 248 ~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
++.+ ++|||+.||| +++++.++|+.| ||+|++||+++.
T Consensus 289 ~~~~--~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 289 REAY--QGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp HHHC--CSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHC--CCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHh
Confidence 7777 7999999999 999999999998 999999999985
No 64
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.70 E-value=1.2e-07 Score=85.99 Aligned_cols=86 Identities=16% Similarity=0.259 Sum_probs=69.6
Q ss_pred CCcEEEEeecCHHHHHHHHHcCCcEEEEccC-CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCC
Q 019244 199 KLPILVKGVLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 277 (344)
Q Consensus 199 ~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~-gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGA 277 (344)
+..++.-.+.++..++++.++|+++|..-+. -|+ ..|..+.+.|..+++.. ++|||++|||.+++|+.+++.+||
T Consensus 135 Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGs--G~Gi~~~~lI~~I~e~~--~vPVI~eGGI~TPsDAa~AmeLGA 210 (265)
T 1wv2_A 135 GFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGS--GLGICNPYNLRIILEEA--KVPVLVDAGVGTASDAAIAMELGC 210 (265)
T ss_dssp TCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTC--CCCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHHTC
T ss_pred CCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCC--CCCcCCHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHHHcCC
Confidence 5555544567899999999999999977332 122 12455678888888754 799999999999999999999999
Q ss_pred CEEEEchHHHH
Q 019244 278 SGIFIGRPVVY 288 (344)
Q Consensus 278 d~V~ig~~~l~ 288 (344)
|+|++|+.+..
T Consensus 211 dgVlVgSAI~~ 221 (265)
T 1wv2_A 211 EAVLMNTAIAH 221 (265)
T ss_dssp SEEEESHHHHT
T ss_pred CEEEEChHHhC
Confidence 99999999874
No 65
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.70 E-value=2.9e-07 Score=85.04 Aligned_cols=88 Identities=15% Similarity=0.209 Sum_probs=69.4
Q ss_pred cCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCC
Q 019244 198 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 277 (344)
Q Consensus 198 ~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGA 277 (344)
.++-+++ .+.+.++++++.++|+|.|-+.|...+.+ ...++...++.+.++.++++++.|||.|++|+.++..+||
T Consensus 168 lGl~~lv-evh~~eEl~~A~~~ga~iIGinnr~l~t~---~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga 243 (272)
T 3tsm_A 168 LGMDALI-EVHDEAEMERALKLSSRLLGVNNRNLRSF---EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGI 243 (272)
T ss_dssp TTCEEEE-EECSHHHHHHHTTSCCSEEEEECBCTTTC---CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTC
T ss_pred cCCeEEE-EeCCHHHHHHHHhcCCCEEEECCCCCccC---CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCC
Confidence 4665554 46789999999999999998766543322 2334555566667766799999999999999999999999
Q ss_pred CEEEEchHHHHH
Q 019244 278 SGIFIGRPVVYS 289 (344)
Q Consensus 278 d~V~ig~~~l~~ 289 (344)
++|.||+.++.+
T Consensus 244 ~gvLVG~almr~ 255 (272)
T 3tsm_A 244 GTFLIGESLMRQ 255 (272)
T ss_dssp CEEEECHHHHTS
T ss_pred CEEEEcHHHcCC
Confidence 999999999864
No 66
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=98.69 E-value=6.9e-07 Score=85.31 Aligned_cols=100 Identities=16% Similarity=0.097 Sum_probs=77.4
Q ss_pred CCcHHHHHHHHHhc--CCcEEEEeec--------CHHH----HHHHHHcCCcEEEEccCCCCCC---CCch-hhHHHHHH
Q 019244 185 SLSWKDVKWLQTIT--KLPILVKGVL--------TAED----ARIAVQAGAAGIIVSNHGARQL---DYVP-ATIMALEE 246 (344)
Q Consensus 185 ~~~~~~i~~i~~~~--~~PvivK~v~--------~~~~----a~~~~~~G~d~I~v~~~gG~~~---~~g~-~~~~~l~~ 246 (344)
.|..+.++.+|+.+ +.||.+|... +.++ ++.+.++ +|+|.++. |+... ...+ ..++.+.+
T Consensus 194 rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~-g~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3kru_A 194 RFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSS-GGLLNVDINLYPGYQVKYAET 271 (343)
T ss_dssp HHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEEC-CCSSCCCCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccC-CceEeeeecccCceeehHHHH
Confidence 34567899999999 5899999874 2333 6778888 99999973 22210 1111 24566777
Q ss_pred HHHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 247 VVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 247 i~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
+++.+ ++|||+.|||++++++.++|+.| ||+|++||+++.
T Consensus 272 ir~~~--~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~la 312 (343)
T 3kru_A 272 IKKRC--NIKTSAVGLITTQELAEEILSNERADLVALGRELLR 312 (343)
T ss_dssp HHHHH--TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHhc--CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhc
Confidence 77777 69999999999999999999998 999999999985
No 67
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=98.69 E-value=3.2e-07 Score=88.73 Aligned_cols=99 Identities=12% Similarity=-0.007 Sum_probs=74.3
Q ss_pred CcHHHHHHHHHhcC-CcEEEEeecC-----------HHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHH
Q 019244 186 LSWKDVKWLQTITK-LPILVKGVLT-----------AED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK 249 (344)
Q Consensus 186 ~~~~~i~~i~~~~~-~PvivK~v~~-----------~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~ 249 (344)
+..+.++.+|+.++ -||.+|.... .++ ++.+.++|+|+|.+++..-.+...+ ..++.+.++++
T Consensus 218 ~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~ 296 (377)
T 2r14_A 218 FPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQ 296 (377)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHH
Confidence 45678999999885 3999997531 233 7888999999999975321110001 13456677777
Q ss_pred HccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 250 ATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 250 ~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
.+ ++|||+.||| +..++.++|+.| ||+|++||+++.
T Consensus 297 ~~--~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 297 RF--KGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp HC--CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HC--CCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHh
Confidence 77 7999999999 699999999998 999999999985
No 68
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.68 E-value=2.9e-08 Score=93.32 Aligned_cols=120 Identities=20% Similarity=0.266 Sum_probs=79.7
Q ss_pred cCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC-----------------------CCC-------chhhHHHHHHH
Q 019244 198 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ-----------------------LDY-------VPATIMALEEV 247 (344)
Q Consensus 198 ~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~-----------------------~~~-------g~~~~~~l~~i 247 (344)
+++|+++ .+.+.+++.++.+.|+|.|.+.|..|+. .+. .+.+++.+.++
T Consensus 124 ~g~~v~~-~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i 202 (305)
T 2nv1_A 124 YTVPFVC-GCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQI 202 (305)
T ss_dssp CSSCEEE-EESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHH
T ss_pred cCCcEEE-EeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHH
Confidence 4566554 4567777888888888888885422210 000 12345667777
Q ss_pred HHHccCCCcEE--EecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhc
Q 019244 248 VKATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 325 (344)
Q Consensus 248 ~~~~~~~~~vi--a~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~ 325 (344)
.+.. ++||+ ++|||++++|+.+++.+||++|++|+.++.. .. ....++.+.+.+..++...+..++.++.
T Consensus 203 ~~~~--~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~---~~---p~~~~~~l~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 2nv1_A 203 KKDG--KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS---DN---PAKFAKAIVEATTHFTDYKLIAELSKEL 274 (305)
T ss_dssp HHHT--SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGS---SC---HHHHHHHHHHHHHTTTCHHHHHHHTSCC
T ss_pred HHhc--CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcC---CC---HHHHHHHHHHHHHHhcChhhHHHHHHHh
Confidence 6654 78998 9999999999999999999999999999852 11 1235556666666555555554455544
Q ss_pred c
Q 019244 326 R 326 (344)
Q Consensus 326 ~ 326 (344)
+
T Consensus 275 g 275 (305)
T 2nv1_A 275 G 275 (305)
T ss_dssp -
T ss_pred h
Confidence 3
No 69
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.66 E-value=9.6e-07 Score=78.18 Aligned_cols=116 Identities=16% Similarity=0.162 Sum_probs=81.3
Q ss_pred HHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 188 WKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
.+.++.. +.++.++++. +.+++++..+.+.|+|+|.+... .+..++.+.++++..+.++||+++|||. .+
T Consensus 91 ~~~~~~~-~~~g~~~~~g-~~t~~e~~~a~~~G~d~v~v~~t-------~~~g~~~~~~l~~~~~~~ipvia~GGI~-~~ 160 (212)
T 2v82_A 91 SEVIRRA-VGYGMTVCPG-CATATEAFTALEAGAQALKIFPS-------SAFGPQYIKALKAVLPSDIAVFAVGGVT-PE 160 (212)
T ss_dssp HHHHHHH-HHTTCEEECE-ECSHHHHHHHHHTTCSEEEETTH-------HHHCHHHHHHHHTTSCTTCEEEEESSCC-TT
T ss_pred HHHHHHH-HHcCCCEEee-cCCHHHHHHHHHCCCCEEEEecC-------CCCCHHHHHHHHHhccCCCeEEEeCCCC-HH
Confidence 3445444 4457777665 78899999999999999988321 1223566666665553259999999997 99
Q ss_pred HHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHH
Q 019244 268 DVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMAL 315 (344)
Q Consensus 268 dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~ 315 (344)
++.+++.+||++|.+|+.++.+- +..+...+.++.+.+.++...++
T Consensus 161 ~i~~~~~~Ga~gv~vGsai~~~~--~~~~d~~~~~~~l~~~~~~~~~~ 206 (212)
T 2v82_A 161 NLAQWIDAGCAGAGLGSDLYRAG--QSVERTAQQAAAFVKAYREAVQL 206 (212)
T ss_dssp THHHHHHHTCSEEEECTTTCCTT--CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCEEEEChHHhCCC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987421 11234555666666666655543
No 70
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.65 E-value=2.8e-08 Score=92.99 Aligned_cols=118 Identities=19% Similarity=0.236 Sum_probs=84.8
Q ss_pred HHHHHHh-cCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCC-----------------------CC-------chh
Q 019244 191 VKWLQTI-TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL-----------------------DY-------VPA 239 (344)
Q Consensus 191 i~~i~~~-~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~-----------------------~~-------g~~ 239 (344)
++.+++. .+.++++ .+.+.+++.++.++|+|.|.+.|.+|+.. +. ..+
T Consensus 116 i~~i~~~~~g~~vvv-~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~ 194 (297)
T 4adt_A 116 YNHINKHKFKTPFVC-GCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRA 194 (297)
T ss_dssp SCCCCGGGCSSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTC
T ss_pred HHHHHhcCCCCeEEE-EeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCC
Confidence 4555553 4788877 58899999999999999999987765431 01 124
Q ss_pred hHHHHHHHHHHccCCCcEE--EecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhC
Q 019244 240 TIMALEEVVKATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSG 317 (344)
Q Consensus 240 ~~~~l~~i~~~~~~~~~vi--a~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G 317 (344)
+++.++++.+.+ ++|++ +.|||.++.|+.+++.+|||+|++|+.++.+ +.....++.|.+.+..++...+
T Consensus 195 ~~~ll~~i~~~~--~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a------~dp~~~~~~l~~ai~~~~~~~~ 266 (297)
T 4adt_A 195 PIDLILLTRKLK--RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFES------ENPQKMASSIVMAVSNFNNPKI 266 (297)
T ss_dssp CHHHHHHHHHHT--SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTS------SCHHHHHHHHHHHHHTTTCHHH
T ss_pred CHHHHHHHHHhc--CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcC------CCHHHHHHHHHHHHHhhCCHHH
Confidence 567788887765 57776 9999999999999999999999999999853 1122344555555554444333
No 71
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.65 E-value=1.1e-07 Score=108.12 Aligned_cols=194 Identities=11% Similarity=0.052 Sum_probs=115.5
Q ss_pred eeecccccccceeecccccccccCChhhHHHHHHHHHcCCcc-----ccCCHHHHHHHHHHHHHcC--CcEEEeccCCc-
Q 019244 63 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIM-----VYKDRNVVAQLVRRAERAG--FKAIALTVDTP- 134 (344)
Q Consensus 63 t~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~-----~~~d~~~~~~~i~~a~~ag--~~~l~~tvd~~- 134 (344)
|+++|+ .||+.++|+... + .-.|+.|++++|... -+.+++..++-|+++++.- -+.+.+|+-.+
T Consensus 584 t~llg~---~PIi~~gM~~~~-~----~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~ 655 (2051)
T 2uv8_G 584 SKLIGR---PPLLVPGMTPCT-V----SPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGINLIYVN 655 (2051)
T ss_dssp HHHHSS---CSEEECCCHHHH-T----CHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTC
T ss_pred HHhhCc---cceecCCCcccc-c----cHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 446783 699999997322 1 335899999999766 2468888888888887631 12233332111
Q ss_pred -c-ccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecC---
Q 019244 135 -R-LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLT--- 209 (344)
Q Consensus 135 -~-~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~--- 209 (344)
. ..+.. ++.... +..|... +. .....+ ...++....+.+.+++++|..-..+
T Consensus 656 ~~~~~~~~-~~~~~~-~~~gv~i--------~~-----------v~~~ag--~p~~~~~~~~i~~lG~~vi~~~~~~~~a 712 (2051)
T 2uv8_G 656 PFMLQWGI-PLIKEL-RSKGYPI--------QF-----------LTIGAG--VPSLEVASEYIETLGLKYLGLKPGSIDA 712 (2051)
T ss_dssp TTHHHHHH-HHHHHH-HHTTCSE--------EE-----------EEEESS--CCCHHHHHHHHHHSCCSCEEECCCSHHH
T ss_pred hhhhhhhH-HHHHHH-HHcCCCc--------ce-----------EEecCC--CCchhhHHHHHHHcCCEEEEecCchHHH
Confidence 0 00000 000000 0000000 00 000011 1234433333333488888654433
Q ss_pred HHHHHHHHHcCCcEE---EEcc--CCCCC--CCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHH---------
Q 019244 210 AEDARIAVQAGAAGI---IVSN--HGARQ--LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL--------- 273 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I---~v~~--~gG~~--~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kal--------- 273 (344)
...++.+.++|+|++ ++.| .||+. .|...+++..++++++.+ ++|||+.|||.+|.+++.+|
T Consensus 713 ~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~--~ipviaaGGi~dg~~~~aaL~g~w~~~~g 790 (2051)
T 2uv8_G 713 ISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHP--NIMLIFGSGFGSADDTYPYLTGEWSTKFD 790 (2051)
T ss_dssp HHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCT--TBCCEEESSCCSHHHHTHHHHTCGGGTTT
T ss_pred HHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcC--CceEEEeCCCCCHHHHHHHHccccccccC
Confidence 345677888899993 3334 34541 233456667788888766 79999999999999999999
Q ss_pred --HcCCCEEEEchHHHHH
Q 019244 274 --ALGASGIFIGRPVVYS 289 (344)
Q Consensus 274 --alGAd~V~ig~~~l~~ 289 (344)
+||||+|+||+.|+-+
T Consensus 791 ~~~lgadGv~~GTrf~~t 808 (2051)
T 2uv8_G 791 YPPMPFDGFLFGSRVMIA 808 (2051)
T ss_dssp CCCCCCSCEECSGGGTTS
T ss_pred ccCCCCceeeechHHHhC
Confidence 9999999999999854
No 72
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.65 E-value=1.2e-06 Score=80.78 Aligned_cols=69 Identities=17% Similarity=0.224 Sum_probs=50.5
Q ss_pred HHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhc--ChHHHHHHHHHHHHHHHH
Q 019244 241 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAE--GEKGVRRVLEMLREEFEL 311 (344)
Q Consensus 241 ~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~--G~~~v~~~l~~l~~el~~ 311 (344)
.+.+.++++.. ++||+++|||++++++.+++..|||+|.+|+.++..+... ..+...+.+..+.++++.
T Consensus 194 ~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~~~~~~~~~~~~~~~~~~~~~~~l~~ 264 (268)
T 1qop_A 194 HHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIEKNLASPKQMLAELRSFVSAMKA 264 (268)
T ss_dssp HHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhhHhhcccCchHHHHHHHHHHHHHHH
Confidence 56677777655 7999999999999999999999999999999998865421 112222344555555543
No 73
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.65 E-value=1.1e-06 Score=84.57 Aligned_cols=99 Identities=12% Similarity=-0.001 Sum_probs=76.3
Q ss_pred CCcHHHHHHHHHhcC-CcEEEEeecC------------HHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHH
Q 019244 185 SLSWKDVKWLQTITK-LPILVKGVLT------------AED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEV 247 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~-~PvivK~v~~------------~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i 247 (344)
.+..+.++.+|+.++ -||.+|+... .++ ++.+.++|+|+|.+++..-.+... ..++.+.++
T Consensus 212 r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~--~~~~~~~~v 289 (364)
T 1vyr_A 212 RLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKP--YSEAFRQKV 289 (364)
T ss_dssp HHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC--CCHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCc--ccHHHHHHH
Confidence 345678999999984 3999998632 223 788999999999997632111001 134567778
Q ss_pred HHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 248 VKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 248 ~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
++.+ ++|||+.||| +..++.++|+.| ||+|++||+++.
T Consensus 290 ~~~~--~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 290 RERF--HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp HHHC--CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHC--CCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 7777 7999999999 899999999998 999999999985
No 74
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=98.64 E-value=1.1e-06 Score=85.63 Aligned_cols=101 Identities=13% Similarity=-0.009 Sum_probs=76.0
Q ss_pred CCcHHHHHHHHHhcC-CcEEEEeecC---------------HHHHHHHHHcC------CcEEEEccCCCCCCCC------
Q 019244 185 SLSWKDVKWLQTITK-LPILVKGVLT---------------AEDARIAVQAG------AAGIIVSNHGARQLDY------ 236 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~-~PvivK~v~~---------------~~~a~~~~~~G------~d~I~v~~~gG~~~~~------ 236 (344)
.|..+.++.+|+.++ .||.+|.... .+.++.+.++| +|+|.+++..-.+...
T Consensus 222 rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~ 301 (402)
T 2hsa_B 222 KFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRL 301 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTT
T ss_pred HHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccc
Confidence 345678999999985 5999997531 23467888999 9999997632111000
Q ss_pred --chhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 237 --VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 237 --g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
+...++.+.++++.+ ++|||+.||| ++.++.++|+.| ||+|++||+++.
T Consensus 302 ~~~~~~~~~~~~vk~~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 302 GSEEEEARLMRTLRNAY--QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFIS 353 (402)
T ss_dssp THHHHHHHHHHHHHHHC--SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred cCCcchHHHHHHHHHHC--CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh
Confidence 112355667777777 7899999999 999999999998 999999999985
No 75
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.63 E-value=1.6e-06 Score=79.97 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=81.2
Q ss_pred cHHHHHHHHHh-cCCcEEEEeecC-------HHHHHHHHHcCCcEEEEccC---------------CCC--------C--
Q 019244 187 SWKDVKWLQTI-TKLPILVKGVLT-------AEDARIAVQAGAAGIIVSNH---------------GAR--------Q-- 233 (344)
Q Consensus 187 ~~~~i~~i~~~-~~~PvivK~v~~-------~~~a~~~~~~G~d~I~v~~~---------------gG~--------~-- 233 (344)
.++.++++|+. .++|+++-+-.+ ..-++.+.++|+|++++..- |=. .
T Consensus 84 ~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~ 163 (271)
T 3nav_A 84 CFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASD 163 (271)
T ss_dssp HHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCH
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCH
Confidence 45678888887 688988754322 23478888999998777421 100 0
Q ss_pred ------------------CC--Cch------hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 234 ------------------LD--YVP------ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 234 ------------------~~--~g~------~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.. .|. ...+.+.++++.. ++||++.+||++++++.+++..|||+|.+|+.++
T Consensus 164 eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 164 ETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp HHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHH
Confidence 00 111 1234566666654 7999999999999999999999999999999999
Q ss_pred HHhhhc--ChHHHHHHHHHHHHHHHH
Q 019244 288 YSLAAE--GEKGVRRVLEMLREEFEL 311 (344)
Q Consensus 288 ~~~~~~--G~~~v~~~l~~l~~el~~ 311 (344)
..+... ..+...+.+..+.++|+.
T Consensus 242 ~~i~~~~~~~~~~~~~~~~~~~~l~~ 267 (271)
T 3nav_A 242 KIIETHLDNPAKQLTELANFTQAMKK 267 (271)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccchHHHHHHHHHHHHHHHH
Confidence 876532 222233344555556554
No 76
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=98.63 E-value=4.3e-07 Score=87.85 Aligned_cols=100 Identities=14% Similarity=-0.041 Sum_probs=72.9
Q ss_pred CcHHHHHHHHHhcC-CcEEEEeecC---------------HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHH
Q 019244 186 LSWKDVKWLQTITK-LPILVKGVLT---------------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK 249 (344)
Q Consensus 186 ~~~~~i~~i~~~~~-~PvivK~v~~---------------~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~ 249 (344)
+..+.++.+|+.++ -||.+|.... .+.++.+.++|+|+|.+++..-.+...+......+.++++
T Consensus 219 ~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~ 298 (376)
T 1icp_A 219 FALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRK 298 (376)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHH
Confidence 45678999999985 3999998621 2346788899999999975321110001112234566677
Q ss_pred HccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 250 ATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 250 ~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
.+ ++|||+.||| +..++.++|+.| ||+|++||+++.
T Consensus 299 ~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 299 AY--KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp HC--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred Hc--CCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHh
Confidence 66 6899999999 899999999998 999999999985
No 77
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.63 E-value=3.2e-07 Score=82.74 Aligned_cols=177 Identities=16% Similarity=0.144 Sum_probs=111.7
Q ss_pred HHHHHHHcCCcc--ccCCHHHHHHHHHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCC-cccccccccccccccccc
Q 019244 93 TARAASAAGTIM--VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEA 169 (344)
Q Consensus 93 lA~aA~~~g~~~--~~~d~~~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~ 169 (344)
+.....+.++.- ...+++....+.+.+.++|.+.+.+|..+|..-...+.++..+ |. -.+...+ +..+.....
T Consensus 27 ~~~~l~~~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~--~~~~iGaGTV--lt~~~a~~A 102 (232)
T 4e38_A 27 INNQLKALKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ--PEMLIGAGTI--LNGEQALAA 102 (232)
T ss_dssp HHHHHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TTCEEEEECC--CSHHHHHHH
T ss_pred HHHHHHhCCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC--CCCEEeECCc--CCHHHHHHH
Confidence 334445556543 3457777788888899999999999988775322233444443 21 0111111 110000000
Q ss_pred cchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHH
Q 019244 170 NDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK 249 (344)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~ 249 (344)
...+.+..++ +.++.+.++..++ .++|++. ++.|+.++.++.++|+|.|.++-.. .. +| ...|+.++.
T Consensus 103 i~AGA~fIvs----P~~~~~vi~~~~~-~gi~~ip-Gv~TptEi~~A~~~Gad~vK~FPa~--~~-gG---~~~lkal~~ 170 (232)
T 4e38_A 103 KEAGATFVVS----PGFNPNTVRACQE-IGIDIVP-GVNNPSTVEAALEMGLTTLKFFPAE--AS-GG---ISMVKSLVG 170 (232)
T ss_dssp HHHTCSEEEC----SSCCHHHHHHHHH-HTCEEEC-EECSHHHHHHHHHTTCCEEEECSTT--TT-TH---HHHHHHHHT
T ss_pred HHcCCCEEEe----CCCCHHHHHHHHH-cCCCEEc-CCCCHHHHHHHHHcCCCEEEECcCc--cc-cC---HHHHHHHHH
Confidence 1111111222 3355566777666 4888876 5789999999999999999996421 01 12 356666665
Q ss_pred HccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 250 ATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 250 ~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.+ .++|+++.|||. .+++..++++||.++.+|+.+.
T Consensus 171 p~-p~ip~~ptGGI~-~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 171 PY-GDIRLMPTGGIT-PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp TC-TTCEEEEBSSCC-TTTHHHHHTSTTBCCEEECGGG
T ss_pred Hh-cCCCeeeEcCCC-HHHHHHHHHCCCeEEEECchhc
Confidence 55 379999999995 8999999999999998888765
No 78
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.63 E-value=1.1e-06 Score=80.99 Aligned_cols=123 Identities=17% Similarity=0.173 Sum_probs=80.2
Q ss_pred cHHHHHHHHHh-cCCcEEEEeecCH-------HHHHHHHHcCCcEEEEccCC--------------C----------CC-
Q 019244 187 SWKDVKWLQTI-TKLPILVKGVLTA-------EDARIAVQAGAAGIIVSNHG--------------A----------RQ- 233 (344)
Q Consensus 187 ~~~~i~~i~~~-~~~PvivK~v~~~-------~~a~~~~~~G~d~I~v~~~g--------------G----------~~- 233 (344)
.++.++++|+. .++|+++-.-.++ .-++.+.++|+|++++..-. | +.
T Consensus 82 ~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~ 161 (267)
T 3vnd_A 82 CFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADA 161 (267)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCH
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCH
Confidence 35678888887 6888877543232 23778888888888774210 0 00
Q ss_pred ------------------CC--Cch------hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 234 ------------------LD--YVP------ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 234 ------------------~~--~g~------~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.. .|. ...+.+.++++.. ++||++.|||++++++.+++..|||+|.+|+.++
T Consensus 162 eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 162 DTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVV 239 (267)
T ss_dssp HHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 00 111 1234566665544 7999999999999999999999999999999998
Q ss_pred HHhhhc--ChHHHHHHHHHHHHHHHH
Q 019244 288 YSLAAE--GEKGVRRVLEMLREEFEL 311 (344)
Q Consensus 288 ~~~~~~--G~~~v~~~l~~l~~el~~ 311 (344)
..+... ..+...+.+..+.++|+.
T Consensus 240 ~~i~~~~~~~~~~~~~~~~~~~~l~~ 265 (267)
T 3vnd_A 240 KIIEAHQHDEATLLAKLAEFTTAMKA 265 (267)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccChHHHHHHHHHHHHHHHh
Confidence 876532 122233345555566553
No 79
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.60 E-value=1.2e-06 Score=84.31 Aligned_cols=92 Identities=20% Similarity=0.063 Sum_probs=72.7
Q ss_pred CcHHHHHHHHHhcC-CcEEEEeecC-----------HHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHH
Q 019244 186 LSWKDVKWLQTITK-LPILVKGVLT-----------AED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK 249 (344)
Q Consensus 186 ~~~~~i~~i~~~~~-~PvivK~v~~-----------~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~ 249 (344)
|..+.++.+|+.++ -||.+|.... .++ ++.+.++|+|+|.+++.. .+. ..+.++++
T Consensus 205 f~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~ 276 (362)
T 4ab4_A 205 LLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE-----ADD---SIGPLIKE 276 (362)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC-----CTT---CCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC-----CCH---HHHHHHHH
Confidence 45678999999984 3999998632 222 678889999999997632 122 23556666
Q ss_pred HccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 250 ATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 250 ~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
.+ ++|||+.||| +..++.++|+.| ||+|++||+++.
T Consensus 277 ~~--~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 277 AF--GGPYIVNERF-DKASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp HH--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HC--CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 66 6899999999 999999999998 999999999985
No 80
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=98.59 E-value=1.2e-06 Score=84.09 Aligned_cols=93 Identities=15% Similarity=-0.010 Sum_probs=73.3
Q ss_pred CCcHHHHHHHHHhcC-CcEEEEeecC-----------H----HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHH
Q 019244 185 SLSWKDVKWLQTITK-LPILVKGVLT-----------A----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV 248 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~-~PvivK~v~~-----------~----~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~ 248 (344)
.|..+.++.+|+.++ -||.+|.... . +.++.+.++|+|+|.+++.. .++ ..+..++
T Consensus 212 rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik 283 (361)
T 3gka_A 212 RLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF-----GGD---AIGQQLK 283 (361)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-----STT---CCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC-----CCH---HHHHHHH
Confidence 445678999999984 3999998632 2 23678889999999997632 122 3355666
Q ss_pred HHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 249 KATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 249 ~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
+.+ ++|||+.||| +.+++.++|+.| ||+|++||+++.
T Consensus 284 ~~~--~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 284 AAF--GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp HHH--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHc--CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 666 6899999999 999999999998 999999999985
No 81
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.57 E-value=3.2e-06 Score=87.45 Aligned_cols=100 Identities=16% Similarity=0.084 Sum_probs=74.9
Q ss_pred cHHHHHHHHHhc--CCcEEEEeec--------CH----HHHHHHHHcCCcEEEEccCCCCC------CCCch-hhHHHHH
Q 019244 187 SWKDVKWLQTIT--KLPILVKGVL--------TA----EDARIAVQAGAAGIIVSNHGARQ------LDYVP-ATIMALE 245 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v~--------~~----~~a~~~~~~G~d~I~v~~~gG~~------~~~g~-~~~~~l~ 245 (344)
..+.++.+|+.+ +.||.+|... +. +.++.+.++|+|+|.+++..... ...++ ..++.+.
T Consensus 194 ~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (671)
T 1ps9_A 194 AVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTR 273 (671)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHH
T ss_pred HHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHH
Confidence 346789999998 6899999862 33 33678889999999997521100 01111 1245566
Q ss_pred HHHHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 246 EVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 246 ~i~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
++++.+ ++||++.|||.++.++.++++.| ||+|++||+++.
T Consensus 274 ~i~~~~--~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 274 KLKGHV--SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLA 315 (671)
T ss_dssp HHTTSC--SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred HHHHhc--CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHh
Confidence 666555 79999999999999999999998 999999999985
No 82
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.57 E-value=9e-07 Score=81.48 Aligned_cols=95 Identities=19% Similarity=0.227 Sum_probs=69.6
Q ss_pred HHHHHHHhc--CCcEEEEeecCHHHHHHHHHcCCcEEEEccC-CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH
Q 019244 190 DVKWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 266 (344)
Q Consensus 190 ~i~~i~~~~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~-gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g 266 (344)
.++..++.+ ++.++.-.+.+.+.++++.+.|+|+|...+. -|+. .+..+.+.+..+++.. ++||++.|||+++
T Consensus 115 ~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~--~~~~~~~~l~~i~~~~--~iPviv~gGI~t~ 190 (264)
T 1xm3_A 115 TLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSG--QGILNPLNLSFIIEQA--KVPVIVDAGIGSP 190 (264)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCCSH
T ss_pred HHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCC--CCCCCHHHHHHHHhcC--CCCEEEEeCCCCH
Confidence 455565543 5555543446788999999999999944221 1211 1223356777777654 7999999999999
Q ss_pred HHHHHHHHcCCCEEEEchHHHH
Q 019244 267 TDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 267 ~dv~kalalGAd~V~ig~~~l~ 288 (344)
+|+.+++++|||+|.+|+.++.
T Consensus 191 eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 191 KDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp HHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEcHHHhC
Confidence 9999999999999999999875
No 83
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.55 E-value=5e-08 Score=91.24 Aligned_cols=121 Identities=20% Similarity=0.240 Sum_probs=88.6
Q ss_pred CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC---------------------CC-C--------chhhHHHHHHHH
Q 019244 199 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ---------------------LD-Y--------VPATIMALEEVV 248 (344)
Q Consensus 199 ~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~---------------------~~-~--------g~~~~~~l~~i~ 248 (344)
++++++. +.+++++..+.++|+|.|.+.+..|.. .+ . .++.++.+.+++
T Consensus 125 ~i~l~~~-v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~ 203 (297)
T 2zbt_A 125 KVPFVCG-ARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVH 203 (297)
T ss_dssp SSCEEEE-ESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHH
T ss_pred CceEEee-cCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHH
Confidence 6787765 578999999999999999885311100 00 0 123456677777
Q ss_pred HHccCCCcEE--EecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhcc
Q 019244 249 KATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 326 (344)
Q Consensus 249 ~~~~~~~~vi--a~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~ 326 (344)
+.. ++|++ ++|||++.+|+.+++.+|||+|++|+.++.+ .. ....++.+++.++..+...++.+++++.+
T Consensus 204 ~~~--~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~---~d---p~~~~~~l~~~i~~~~~~~~~~~~~~~~g 275 (297)
T 2zbt_A 204 DHG--RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS---GD---PRKRARAIVRAVAHYNDPEVLAEVSEDLG 275 (297)
T ss_dssp HHS--SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS---SC---HHHHHHHHHHHHHTTTCHHHHHHHHTTCC
T ss_pred Hhc--CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC---CC---HHHHHHHHHHHHHHHhchHhhhHHHHhcC
Confidence 654 68888 9999999999999999999999999998742 11 34566777777777777777778888876
Q ss_pred cc
Q 019244 327 DH 328 (344)
Q Consensus 327 ~~ 328 (344)
..
T Consensus 276 ~~ 277 (297)
T 2zbt_A 276 EP 277 (297)
T ss_dssp CC
T ss_pred ce
Confidence 55
No 84
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.52 E-value=1.2e-06 Score=78.09 Aligned_cols=95 Identities=19% Similarity=0.144 Sum_probs=67.4
Q ss_pred HHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC-CCC-chhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 188 WKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ-LDY-VPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~-~~~-g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
.+.++++.. ++.+.+ .+.++++++.+.+.|+|+|.+++..+++ ..+ .+..++.+.++++.. ++||+++||| +
T Consensus 101 ~~~~~~~~~--~~~ig~-sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~ 174 (221)
T 1yad_A 101 PKQIRARFP--HLHIGR-SVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-T 174 (221)
T ss_dssp HHHHHHHCT--TCEEEE-EECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-C
T ss_pred HHHHHHHCC--CCEEEE-EcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-C
Confidence 344444432 444443 3468999999999999999986532221 111 123466777776665 7999999999 9
Q ss_pred HHHHHHHHHcCCCEEEEchHHHH
Q 019244 266 GTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~~~l~ 288 (344)
.+++.+++.+||++|.+|+.++.
T Consensus 175 ~~nv~~~~~~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 175 PDRLRDVKQAGADGIAVMSGIFS 197 (221)
T ss_dssp GGGHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEhHHhhC
Confidence 99999999999999999999874
No 85
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=98.48 E-value=4.8e-07 Score=88.64 Aligned_cols=100 Identities=15% Similarity=0.198 Sum_probs=74.6
Q ss_pred HHHHHHHHHhc------CCcEEEEeec----------CHHH----HHHHHH-cCCcEEEEccCCCC-----CCCCchh-h
Q 019244 188 WKDVKWLQTIT------KLPILVKGVL----------TAED----ARIAVQ-AGAAGIIVSNHGAR-----QLDYVPA-T 240 (344)
Q Consensus 188 ~~~i~~i~~~~------~~PvivK~v~----------~~~~----a~~~~~-~G~d~I~v~~~gG~-----~~~~g~~-~ 240 (344)
.+.++.+|+.+ +.||.+|... +.++ ++.+.+ +|+|+|.|++.+.. ....+.. .
T Consensus 225 ~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~ 304 (419)
T 3l5a_A 225 LEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFG 304 (419)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTT
T ss_pred HHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCcccc
Confidence 45688888877 5799999752 3433 677888 99999999864320 0111211 2
Q ss_pred HHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 241 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 241 ~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
...+..+++.+.+++|||+.|||++++++.++|+. ||+|++||+++.
T Consensus 305 ~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 305 RPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp SBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 34556677776557999999999999999999999 999999999975
No 86
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.45 E-value=9.4e-07 Score=80.43 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=63.2
Q ss_pred ecCHHHHHHHHHcCCcEEEEccC-CCCCCCCchhhHHHHHHHHHHccCC-CcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 207 VLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGR-IPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 207 v~~~~~a~~~~~~G~d~I~v~~~-gG~~~~~g~~~~~~l~~i~~~~~~~-~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
..+++.++++.++|++.|.--+. -|+ ..|..+.+.|..+++.. .+ +|||++|||.+++|+.+++.||||+|++|+
T Consensus 132 ~~D~~~ak~l~~~G~~aVmPlg~pIGs--G~Gi~~~~~L~~i~~~~-~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 132 GPDLVLAKRLAALGTATVMPLAAPIGS--GWGVRTRALLELFAREK-ASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp CSCHHHHHHHHHHTCSCBEEBSSSTTT--CCCSTTHHHHHHHHHTT-TTSSCBEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred CCCHHHHHHHHhcCCCEEEecCccCcC--CcccCCHHHHHHHHHhc-CCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 57889999999999999965332 122 12455677788887622 26 999999999999999999999999999999
Q ss_pred HHHH
Q 019244 285 PVVY 288 (344)
Q Consensus 285 ~~l~ 288 (344)
.+..
T Consensus 209 AI~~ 212 (268)
T 2htm_A 209 AIAE 212 (268)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9874
No 87
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.44 E-value=1.1e-06 Score=81.32 Aligned_cols=90 Identities=23% Similarity=0.289 Sum_probs=70.5
Q ss_pred HhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHc
Q 019244 196 TITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 275 (344)
Q Consensus 196 ~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalal 275 (344)
+.+++.+++ .+.+.++++++.++|+|.|.+.|.-.+.+ .+.++.+.++.+.++.++|+++.|||.+++|+.+++.+
T Consensus 159 ~~lGl~~lv-ev~t~ee~~~A~~~Gad~IGv~~r~l~~~---~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~ 234 (272)
T 3qja_A 159 ESLGMTALV-EVHTEQEADRALKAGAKVIGVNARDLMTL---DVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGA 234 (272)
T ss_dssp HHTTCEEEE-EESSHHHHHHHHHHTCSEEEEESBCTTTC---CBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHT
T ss_pred HHCCCcEEE-EcCCHHHHHHHHHCCCCEEEECCCccccc---ccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHc
Confidence 345777765 56889999999999999999875322222 23345566666666557999999999999999999999
Q ss_pred CCCEEEEchHHHHH
Q 019244 276 GASGIFIGRPVVYS 289 (344)
Q Consensus 276 GAd~V~ig~~~l~~ 289 (344)
||++|.+|+.++.+
T Consensus 235 GadgvlVGsal~~a 248 (272)
T 3qja_A 235 GADAVLVGEGLVTS 248 (272)
T ss_dssp TCSEEEECHHHHTC
T ss_pred CCCEEEEcHHHhCC
Confidence 99999999999863
No 88
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.43 E-value=3.8e-06 Score=81.19 Aligned_cols=96 Identities=6% Similarity=-0.114 Sum_probs=72.9
Q ss_pred CcHHHHHHHHHhcC-CcEEEEeec-----------CH----HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHH
Q 019244 186 LSWKDVKWLQTITK-LPILVKGVL-----------TA----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK 249 (344)
Q Consensus 186 ~~~~~i~~i~~~~~-~PvivK~v~-----------~~----~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~ 249 (344)
+..+.++.+|+.++ -||.+|... +. +.++.+.++|+|+|.+++.+-.. ...+. + +.++++
T Consensus 229 ~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--~~~~~-~-~~~ir~ 304 (379)
T 3aty_A 229 LIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--QQIGD-V-VAWVRG 304 (379)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--CCCCC-H-HHHHHT
T ss_pred HHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--CCccH-H-HHHHHH
Confidence 45678999999885 489999763 12 33677889999999998632111 01122 4 666766
Q ss_pred HccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 250 ATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 250 ~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
.+ ++|||+.||| +..++.++|+.| ||+|++||+++.
T Consensus 305 ~~--~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 305 SY--SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp TC--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HC--CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 65 7999999999 999999999998 999999999986
No 89
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.41 E-value=1.2e-06 Score=77.80 Aligned_cols=93 Identities=17% Similarity=0.111 Sum_probs=70.6
Q ss_pred CcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 186 LSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
++.+.++..++ .++|++.. +.|++++.++.+.|+|+|.++. .. .-+| .+.|+.++..++ ++|+++.|||.
T Consensus 92 ~d~~v~~~~~~-~g~~~i~G-~~t~~e~~~A~~~Gad~v~~fp--a~-~~gG---~~~lk~l~~~~~-~ipvvaiGGI~- 161 (207)
T 2yw3_A 92 LLEEVAALAQA-RGVPYLPG-VLTPTEVERALALGLSALKFFP--AE-PFQG---VRVLRAYAEVFP-EVRFLPTGGIK- 161 (207)
T ss_dssp CCHHHHHHHHH-HTCCEEEE-ECSHHHHHHHHHTTCCEEEETT--TT-TTTH---HHHHHHHHHHCT-TCEEEEBSSCC-
T ss_pred CCHHHHHHHHH-hCCCEEec-CCCHHHHHHHHHCCCCEEEEec--Cc-cccC---HHHHHHHHhhCC-CCcEEEeCCCC-
Confidence 34444555554 68888875 8899999999999999999943 11 1012 345666666553 79999999997
Q ss_pred HHHHHHHHHcCCCEEEEchHHHH
Q 019244 266 GTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~~~l~ 288 (344)
..++..++++||++|.+|+.++.
T Consensus 162 ~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 162 EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp GGGHHHHHTCSSBSCEEESGGGS
T ss_pred HHHHHHHHhCCCcEEEEehhhhC
Confidence 79999999999999999998764
No 90
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=98.39 E-value=5.8e-07 Score=80.73 Aligned_cols=172 Identities=19% Similarity=0.076 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEeccCCccccccHH-HHHh--hcCCCCcccccccccccccccccccchhhHHH--Hh---
Q 019244 108 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA-DIKN--RFTLPPFLTLKNFQGLDLGKMDEANDSGLAAY--VA--- 179 (344)
Q Consensus 108 d~~~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~-~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~--- 179 (344)
..+.++++++++.+.|+.++++++.......+.- .++. ..+||.|.........+... ...+..|. +.
T Consensus 15 t~~~i~~l~~~A~~~~~~aVcv~p~~v~~a~~~l~gv~v~tvigFP~G~~~~~~k~~E~~~----i~~GAdEID~Vinig 90 (226)
T 1vcv_A 15 TVDEAVAGARKAEELGVAAYCVNPIYAPVVRPLLRKVKLCVVADFPFGALPTASRIALVSR----LAEVADEIDVVAPIG 90 (226)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECGGGHHHHGGGCSSSEEEEEESTTTCCSCHHHHHHHHHH----HTTTCSEEEEECCHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHhCCCeEEEEeCCCCCCCchHHHHHHHHH----HHCCCCEEEEecchh
Confidence 4566777888888888888887765433222110 0111 12345443221111000000 00111110 00
Q ss_pred --hcCCCCCcHHHHHHHHHhcCCcEEEEee-----cCHHH----HHHHHHcCCcEEEEccCCCC------CCCCchhhHH
Q 019244 180 --GQIDRSLSWKDVKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGAR------QLDYVPATIM 242 (344)
Q Consensus 180 --~~~~~~~~~~~i~~i~~~~~~PvivK~v-----~~~~~----a~~~~~~G~d~I~v~~~gG~------~~~~g~~~~~ 242 (344)
..++-+...++|+.+++..+- ..+|.+ ++.++ ++.+.++|+|+|..|+.-+. ..+.+..+++
T Consensus 91 ~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~ 169 (226)
T 1vcv_A 91 LVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPE 169 (226)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHH
T ss_pred hhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHH
Confidence 011112234578888887642 356744 56554 46688999999999852110 0112233444
Q ss_pred ---HHHHHHHHccCCCcEEEecCCCCHHHHHHHHHc---CCC----EEEEch
Q 019244 243 ---ALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GAS----GIFIGR 284 (344)
Q Consensus 243 ---~l~~i~~~~~~~~~via~GGIr~g~dv~kalal---GAd----~V~ig~ 284 (344)
.+.+..+.++++++|.++||||+..|+.+.+.+ ||+ -++..+
T Consensus 170 dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~ 221 (226)
T 1vcv_A 170 RAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTST 221 (226)
T ss_dssp HHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEESC
T ss_pred HHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecCc
Confidence 444443336778999999999999999999999 999 776654
No 91
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.36 E-value=1.3e-05 Score=73.30 Aligned_cols=120 Identities=19% Similarity=0.219 Sum_probs=78.2
Q ss_pred HHHHHHHhcCCcEEEEee--cCHHHHHHHHHcCCcEEEEccCCC---CCCCCchhhHHHHHHHHHHccCCCcEEEecCCC
Q 019244 190 DVKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSNHGA---RQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 264 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v--~~~~~a~~~~~~G~d~I~v~~~gG---~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr 264 (344)
.++.+++ .++++++-.. .+.+.++.+.+.+.+++.+....| ......+...+.+.++++.. ++||++.|||+
T Consensus 135 ~~~~~~~-~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~--~~pI~vgGGI~ 211 (262)
T 1rd5_A 135 LWSEAKN-NNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT--NKPVAVGFGIS 211 (262)
T ss_dssp HHHHHHH-TTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC--SSCEEEESCCC
T ss_pred HHHHHHH-cCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc--CCeEEEECCcC
Confidence 3455544 3666554443 345666777777776676543333 21122234556778887765 79999999999
Q ss_pred CHHHHHHHHHcCCCEEEEchHHHHHhhh-cChHHHHHHHHHHHHHHHHH
Q 019244 265 RGTDVFKALALGASGIFIGRPVVYSLAA-EGEKGVRRVLEMLREEFELA 312 (344)
Q Consensus 265 ~g~dv~kalalGAd~V~ig~~~l~~~~~-~G~~~v~~~l~~l~~el~~~ 312 (344)
+++++.+++.+|||.|.+|+.++..... ...+...+.+..+.++|+..
T Consensus 212 ~~e~~~~~~~~GAdgvvVGSai~~~~~~~~~~~~~~~~~~~~~~~l~~~ 260 (262)
T 1rd5_A 212 KPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKNA 260 (262)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHHHHSSSSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHhHHHhccChhHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999887532 12222233556666666543
No 92
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.34 E-value=3.6e-06 Score=74.90 Aligned_cols=164 Identities=19% Similarity=0.122 Sum_probs=103.1
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCC-cccccccccccccccccccchhhHHHHhhcCCC
Q 019244 106 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 184 (344)
Q Consensus 106 ~~d~~~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (344)
..+++....+.+.+.++|.+.+.+|..+|.--.-.+.++..| |. -++...+- ..+........+.+..++ +
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~--p~~~IGAGTVl--t~~~a~~ai~AGA~fivs----P 92 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAV--PEAIVGAGTVC--TADDFQKAIDAGAQFIVS----P 92 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TTSEEEEECCC--SHHHHHHHHHHTCSEEEE----S
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHC--CCCeEeecccc--CHHHHHHHHHcCCCEEEe----C
Confidence 456677777888888889999999888775433334444443 21 11111111 100000001112222233 3
Q ss_pred CCcHHHHHHHHHhcCC------cEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 185 SLSWKDVKWLQTITKL------PILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~------PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
.++-+.++..++. ++ |++- ++.|+.++..+.++|+|.|.++-.. .-+| ...|+.++..+ .++|++
T Consensus 93 ~~~~evi~~~~~~-~v~~~~~~~~~P-G~~TptE~~~A~~~Gad~vK~FPa~---~~gG---~~~lkal~~p~-p~i~~~ 163 (217)
T 3lab_A 93 GLTPELIEKAKQV-KLDGQWQGVFLP-GVATASEVMIAAQAGITQLKCFPAS---AIGG---AKLLKAWSGPF-PDIQFC 163 (217)
T ss_dssp SCCHHHHHHHHHH-HHHCSCCCEEEE-EECSHHHHHHHHHTTCCEEEETTTT---TTTH---HHHHHHHHTTC-TTCEEE
T ss_pred CCcHHHHHHHHHc-CCCccCCCeEeC-CCCCHHHHHHHHHcCCCEEEECccc---cccC---HHHHHHHHhhh-cCceEE
Confidence 3555666665553 56 7765 7899999999999999999996321 1112 35666666555 379999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
+.|||. .+++..++++||.++..|+.+.
T Consensus 164 ptGGI~-~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 164 PTGGIS-KDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp EBSSCC-TTTHHHHHHSTTBCCEEESGGG
T ss_pred EeCCCC-HHHHHHHHHCCCEEEEEChhhc
Confidence 999998 8999999999999887776554
No 93
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.33 E-value=4.8e-06 Score=78.16 Aligned_cols=45 Identities=38% Similarity=0.626 Sum_probs=38.6
Q ss_pred HHHHHHHHHccCCCcE--EEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 242 MALEEVVKATQGRIPV--FLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 242 ~~l~~i~~~~~~~~~v--ia~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
+.+.++.+.. ++|| ++.|||.|++|+.+++.+|||+|++|+.++.
T Consensus 230 ell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~ 276 (330)
T 2yzr_A 230 EVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK 276 (330)
T ss_dssp HHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred HHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhc
Confidence 5566665544 6888 6999999999999999999999999999985
No 94
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.32 E-value=3.6e-06 Score=75.70 Aligned_cols=74 Identities=22% Similarity=0.342 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCcEEEEccC--CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~--gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.+.++.+.+.|+|.|.+.+. +|+. .+ +.++.+.++++.. ++||+++|||.+.+|+.+++.+||++|++|+.++
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~--~~-~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~ 231 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTG--LG-YDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFH 231 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTC--SC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCc--Cc-CCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHH
Confidence 46688999999999998542 2221 12 3567778887765 7999999999999999999999999999999997
Q ss_pred H
Q 019244 288 Y 288 (344)
Q Consensus 288 ~ 288 (344)
.
T Consensus 232 ~ 232 (253)
T 1h5y_A 232 F 232 (253)
T ss_dssp T
T ss_pred c
Confidence 5
No 95
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.31 E-value=2.2e-06 Score=77.36 Aligned_cols=74 Identities=20% Similarity=0.251 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCcEEEEccC--CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHc---CCCEEEEch
Q 019244 210 AEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIGR 284 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~--gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalal---GAd~V~ig~ 284 (344)
.+.++.+.++|++.|.+.+. +|. ..+ +.++.+.++++.+ ++||+++|||.+.+|+.+++.+ ||++|++|+
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~--~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~ 226 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGT--LGG-PNLDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGK 226 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTT--TSC-CCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred HHHHHHHHhCCCCEEEEEecCCccc--cCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcH
Confidence 57789999999999988652 121 112 3677788877654 7999999999999999999998 999999999
Q ss_pred HHHH
Q 019244 285 PVVY 288 (344)
Q Consensus 285 ~~l~ 288 (344)
.++.
T Consensus 227 al~~ 230 (244)
T 2y88_A 227 ALYA 230 (244)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 9875
No 96
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.30 E-value=1.5e-06 Score=79.51 Aligned_cols=47 Identities=9% Similarity=0.100 Sum_probs=38.4
Q ss_pred HHHHHHHHHccC---CCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 242 MALEEVVKATQG---RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 242 ~~l~~i~~~~~~---~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
+.+.++.+.++. ++|+++.|||.|.+|+.++.. ||++|.+|+.++.+
T Consensus 193 ~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~ 242 (254)
T 1vc4_A 193 ETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRA 242 (254)
T ss_dssp THHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTS
T ss_pred HHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCC
Confidence 344445444433 689999999999999999999 99999999999863
No 97
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.29 E-value=3.1e-06 Score=76.68 Aligned_cols=77 Identities=21% Similarity=0.255 Sum_probs=61.8
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
.+.++.+.+.|++.|.+.+..-.+...| +.++.+.++++.+ ++||+++|||++.+|+.+++.+||++|++|+.++.+
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~ 231 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEG-YDLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFG 231 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcC
Confidence 5778999999999998863221111123 3578888888876 799999999999999999999999999999999853
No 98
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.27 E-value=5e-06 Score=74.04 Aligned_cols=95 Identities=16% Similarity=0.170 Sum_probs=67.9
Q ss_pred HHHHHHhcCCcEEEEe-ecCHHHHHHHHHcCCcEEEEcc--CCCCCCC-CchhhHHHHHHHHHHccCCCcEEEecCCCCH
Q 019244 191 VKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN--HGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRG 266 (344)
Q Consensus 191 i~~i~~~~~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~--~gG~~~~-~g~~~~~~l~~i~~~~~~~~~via~GGIr~g 266 (344)
+..+++..+. ++++. +.+++++..+.+.|+|+|.++. ..+.... ..+..++.+.++++... ++||+++|||. .
T Consensus 107 ~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~ 183 (227)
T 2tps_A 107 AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-I 183 (227)
T ss_dssp HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-T
T ss_pred HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-H
Confidence 4555555554 44443 3678889999999999999742 1111111 12234566777766552 49999999999 9
Q ss_pred HHHHHHHHcCCCEEEEchHHHH
Q 019244 267 TDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 267 ~dv~kalalGAd~V~ig~~~l~ 288 (344)
+++.+++.+||++|.+|+.++.
T Consensus 184 ~nv~~~~~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 184 DNAAPVIQAGADGVSMISAISQ 205 (227)
T ss_dssp TTSHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEhHHhhc
Confidence 9999999999999999999874
No 99
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.27 E-value=4.5e-06 Score=87.23 Aligned_cols=101 Identities=15% Similarity=0.082 Sum_probs=73.7
Q ss_pred CCcHHHHHHHHHhc--CCcEEEEeec---------C-HHH----HHHHHHcCCcEEEEccCCC-----C---CCCCchh-
Q 019244 185 SLSWKDVKWLQTIT--KLPILVKGVL---------T-AED----ARIAVQAGAAGIIVSNHGA-----R---QLDYVPA- 239 (344)
Q Consensus 185 ~~~~~~i~~i~~~~--~~PvivK~v~---------~-~~~----a~~~~~~G~d~I~v~~~gG-----~---~~~~g~~- 239 (344)
.|..+.++.+|+.+ +.||++|... + .++ ++.+. .|+|.+.+++.+. . .......
T Consensus 200 r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~-~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~ 278 (729)
T 1o94_A 200 RFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMAD-SLVDMWDITIGDIAEWGEDAGPSRFYQQGH 278 (729)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHG-GGCSEEEEEECCSTTGGGTSCCTTTCCTTT
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHHHH-hhcCEEEEeeecccccccccCCccccCccc
Confidence 45667899999999 7999999852 1 222 44444 4899999975321 0 0001111
Q ss_pred hHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 240 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 240 ~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
.+....++++.+ ++|||+.|||.++.++.++|+.| ||+|++||+++.
T Consensus 279 ~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 279 TIPWVKLVKQVS--KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp THHHHHHHHTTC--SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHH
T ss_pred cHHHHHHHHHHC--CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhc
Confidence 355666777665 79999999999999999999998 999999999975
No 100
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.26 E-value=8.5e-06 Score=73.14 Aligned_cols=163 Identities=18% Similarity=0.201 Sum_probs=97.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCcc-cccccccccccccccccchhhHHHHhhcCCCC
Q 019244 107 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFL-TLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 185 (344)
Q Consensus 107 ~d~~~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (344)
.+.+...++++++.++|.+.+.++...+..-...+.++..+ |.-. ....+ +..+........+....+. +.
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~--~~l~vgaGtv--l~~d~~~~A~~aGAd~v~~----p~ 97 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANR--PDFLIAAGTV--LTAEQVVLAKSSGADFVVT----PG 97 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TTCEEEEESC--CSHHHHHHHHHHTCSEEEC----SS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhC--cCcEEeeCcE--eeHHHHHHHHHCCCCEEEE----CC
Confidence 35555566777777888888888766553211122233332 2100 00010 0000000000001111111 23
Q ss_pred CcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 186 LSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
++.+.++..++ .+.|+++. +.|++++.++.+.|+|+|.++. .. .. ...+.|.+++..++ ++|+++.|||.
T Consensus 98 ~d~~v~~~ar~-~g~~~i~G-v~t~~e~~~A~~~Gad~vk~Fp--a~--~~--gG~~~lk~l~~~~~-~ipvvaiGGI~- 167 (224)
T 1vhc_A 98 LNPKIVKLCQD-LNFPITPG-VNNPMAIEIALEMGISAVKFFP--AE--AS--GGVKMIKALLGPYA-QLQIMPTGGIG- 167 (224)
T ss_dssp CCHHHHHHHHH-TTCCEECE-ECSHHHHHHHHHTTCCEEEETT--TT--TT--THHHHHHHHHTTTT-TCEEEEBSSCC-
T ss_pred CCHHHHHHHHH-hCCCEEec-cCCHHHHHHHHHCCCCEEEEee--Cc--cc--cCHHHHHHHHhhCC-CCeEEEECCcC-
Confidence 44555777777 78888874 8999999999999999999943 11 01 12456666665553 79999999995
Q ss_pred HHHHHHHHHc-CCCEEEEchHHHH
Q 019244 266 GTDVFKALAL-GASGIFIGRPVVY 288 (344)
Q Consensus 266 g~dv~kalal-GAd~V~ig~~~l~ 288 (344)
..++...+++ |+++|. |+.++.
T Consensus 168 ~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 168 LHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp TTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred HHHHHHHHhcCCCEEEE-EchhcC
Confidence 6899999999 999999 887764
No 101
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.26 E-value=2.4e-06 Score=75.35 Aligned_cols=93 Identities=17% Similarity=0.231 Sum_probs=67.1
Q ss_pred HHHHHHhcCCcEEEEe--ecCH-HHHHHHHHcCCcEEEEccC-CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH
Q 019244 191 VKWLQTITKLPILVKG--VLTA-EDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 266 (344)
Q Consensus 191 i~~i~~~~~~PvivK~--v~~~-~~a~~~~~~G~d~I~v~~~-gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g 266 (344)
++.+++ .++++++-. ..++ +.++.+.+.|+|+|.+... .|.. .++...+.+.++++... ++||+++|||+ .
T Consensus 96 ~~~~~~-~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~--~~~~~~~~i~~l~~~~~-~~~i~~~gGI~-~ 170 (211)
T 3f4w_A 96 IRAAKE-AGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQA--AGRKPIDDLITMLKVRR-KARIAVAGGIS-S 170 (211)
T ss_dssp HHHHHH-HTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHH--TTCCSHHHHHHHHHHCS-SCEEEEESSCC-T
T ss_pred HHHHHH-cCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccc--cCCCCHHHHHHHHHHcC-CCcEEEECCCC-H
Confidence 444444 477776532 2343 6689999999999987521 1111 12235677778877653 69999999996 9
Q ss_pred HHHHHHHHcCCCEEEEchHHHH
Q 019244 267 TDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 267 ~dv~kalalGAd~V~ig~~~l~ 288 (344)
+++.+++.+|||.|.+||+++.
T Consensus 171 ~~~~~~~~~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 171 QTVKDYALLGPDVVIVGSAITH 192 (211)
T ss_dssp TTHHHHHTTCCSEEEECHHHHT
T ss_pred HHHHHHHHcCCCEEEECHHHcC
Confidence 9999999999999999999875
No 102
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.25 E-value=3.2e-06 Score=76.37 Aligned_cols=74 Identities=24% Similarity=0.314 Sum_probs=59.1
Q ss_pred HHHHHHHHHcCCcEEEEccC--CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHc---CCCEEEEch
Q 019244 210 AEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIGR 284 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~--gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalal---GAd~V~ig~ 284 (344)
.+.++.+.+.|++.|.+.+. +|+. .+ ..++.+.++++.+ ++||+++|||++.+|+.+++++ ||++|++|+
T Consensus 149 ~e~~~~~~~~G~~~i~~~~~~~~~~~--~g-~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 149 YETLDRLNKEGCARYVVTDIAKDGTL--QG-PNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGK 223 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEEC---------C-CCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred HHHHHHHHhCCCCEEEEeccCccccc--CC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeH
Confidence 45579999999999988652 2211 12 3677888887765 7999999999999999999999 999999999
Q ss_pred HHHH
Q 019244 285 PVVY 288 (344)
Q Consensus 285 ~~l~ 288 (344)
.++.
T Consensus 224 al~~ 227 (244)
T 1vzw_A 224 ALYA 227 (244)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9875
No 103
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.25 E-value=5.5e-06 Score=75.27 Aligned_cols=81 Identities=15% Similarity=0.129 Sum_probs=60.5
Q ss_pred ecCHHHHHHHHHcCCcEEEEccCCCCC--CCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 207 VLTAEDARIAVQAGAAGIIVSNHGARQ--LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 207 v~~~~~a~~~~~~G~d~I~v~~~gG~~--~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
+-++++++.+.+.|+|+|.++.-..+. .+..+..++.+.++.+....++||++.||| +.+++.+++.+||++|.+++
T Consensus 142 ~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 142 THDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp ECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESH
T ss_pred CCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeH
Confidence 478999999999999999997632221 111123456677665432237999999999 89999999999999999999
Q ss_pred HHHH
Q 019244 285 PVVY 288 (344)
Q Consensus 285 ~~l~ 288 (344)
.++.
T Consensus 221 ai~~ 224 (243)
T 3o63_A 221 AITS 224 (243)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9875
No 104
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.24 E-value=3.6e-06 Score=76.33 Aligned_cols=74 Identities=15% Similarity=0.197 Sum_probs=59.7
Q ss_pred HHHHHHHHHcCCcEEEEccC--CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~--gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.+.++.+.+.|++.|.+.+. .|+ ..+ +.++.+.++++.+ ++||+++|||++.+|+.+++.+||++|++|+.++
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~--~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~ 228 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGT--KSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFH 228 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTS--CSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCC--CCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHH
Confidence 46689999999999988532 222 122 3577787777655 7999999999999999999999999999999987
Q ss_pred H
Q 019244 288 Y 288 (344)
Q Consensus 288 ~ 288 (344)
.
T Consensus 229 ~ 229 (253)
T 1thf_D 229 F 229 (253)
T ss_dssp T
T ss_pred c
Confidence 5
No 105
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.24 E-value=4.7e-06 Score=76.25 Aligned_cols=95 Identities=24% Similarity=0.436 Sum_probs=72.6
Q ss_pred HHHHHH-hcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC---------------------C-CC---------ch
Q 019244 191 VKWLQT-ITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ---------------------L-DY---------VP 238 (344)
Q Consensus 191 i~~i~~-~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~---------------------~-~~---------g~ 238 (344)
+..|.+ .+++|+++ ++.+.++|.++++.|+|.|-..+..|+. + +. -.
T Consensus 106 ~~~I~k~~f~vpfv~-~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ 184 (291)
T 3o07_A 106 THHIEKDKFKVPFVC-GAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMR 184 (291)
T ss_dssp SCCCCGGGCSSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHT
T ss_pred HHHhhhhcCCCcEEe-eCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccC
Confidence 333444 35788775 5789999999999999999887544431 2 10 02
Q ss_pred hhHHHHHHHHHHccCCCcE--EEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 239 ATIMALEEVVKATQGRIPV--FLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 239 ~~~~~l~~i~~~~~~~~~v--ia~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
++++.+.++.+.. ++|| |+.|||.|+.|+.+++.+|||+|++||.++.
T Consensus 185 ad~elI~~Ike~~--~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 185 VPVSLLKDVLEKG--KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFK 234 (291)
T ss_dssp SCHHHHHHHHHHT--SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred CCHHHHHHHHHcc--CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhC
Confidence 4567788887765 6888 5689999999999999999999999998875
No 106
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=98.23 E-value=1e-05 Score=72.06 Aligned_cols=89 Identities=18% Similarity=0.197 Sum_probs=67.3
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHH
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 269 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv 269 (344)
.+.+.++..+.|++. ++.|++++.++.+.|+|+|.++. .. .. ...+.|..++..++ ++|+++.|||. .+++
T Consensus 100 ~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~v~~Fp--a~--~~--gG~~~lk~i~~~~~-~ipvvaiGGI~-~~n~ 170 (214)
T 1wbh_A 100 PLLKAATEGTIPLIP-GISTVSELMLGMDYGLKEFKFFP--AE--AN--GGVKALQAIAGPFS-QVRFCPTGGIS-PANY 170 (214)
T ss_dssp HHHHHHHHSSSCEEE-EESSHHHHHHHHHTTCCEEEETT--TT--TT--THHHHHHHHHTTCT-TCEEEEBSSCC-TTTH
T ss_pred HHHHHHHHhCCCEEE-ecCCHHHHHHHHHCCCCEEEEec--Cc--cc--cCHHHHHHHhhhCC-CCeEEEECCCC-HHHH
Confidence 344445557888887 48999999999999999999943 11 01 12456666665553 79999999995 6899
Q ss_pred HHHHHc-CCCEEEEchHHHH
Q 019244 270 FKALAL-GASGIFIGRPVVY 288 (344)
Q Consensus 270 ~kalal-GAd~V~ig~~~l~ 288 (344)
...+++ |+++|. |+.++.
T Consensus 171 ~~~l~agg~~~v~-gS~i~~ 189 (214)
T 1wbh_A 171 RDYLALKSVLCIG-GSWLVP 189 (214)
T ss_dssp HHHHTSTTBSCEE-EGGGSC
T ss_pred HHHHhcCCCeEEE-eccccC
Confidence 999999 999999 887764
No 107
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.23 E-value=1.4e-05 Score=72.62 Aligned_cols=103 Identities=12% Similarity=0.232 Sum_probs=76.9
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEccC--C--------------C------------------
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNH--G--------------A------------------ 231 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~~~--g--------------G------------------ 231 (344)
+.++++.+|+.+++||+-|.- .++.+...+..+|||+|-+.-. . |
T Consensus 92 s~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~ 171 (258)
T 4a29_A 92 SYETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILINDENDLDIALR 171 (258)
T ss_dssp CHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhc
Confidence 568888999888999998874 6777778888888888866321 0 0
Q ss_pred ----------CCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 232 ----------RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 232 ----------~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
|.+..-...++...++...++.++.+++.+||++..|+.++...|+++|.||..||..
T Consensus 172 ~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~ 239 (258)
T 4a29_A 172 IGARFIGIMSRDFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRN 239 (258)
T ss_dssp TTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHC
T ss_pred CCCcEEEEeCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCC
Confidence 0111111234445556666667889999999999999999999999999999999974
No 108
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.23 E-value=1.3e-05 Score=71.67 Aligned_cols=93 Identities=23% Similarity=0.275 Sum_probs=67.8
Q ss_pred cHHHHHHHHHhcCCcEEEEee-----cCHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-----~~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
..++|..+++..+-+ .+|.+ ++.+. ++.+.++|+|+|..|..-+ .+..+.+.+..+++.++.++||
T Consensus 105 v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf~----~~gat~~dv~~m~~~vg~~v~V 179 (220)
T 1ub3_A 105 LEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGFG----PRGASLEDVALLVRVAQGRAQV 179 (220)
T ss_dssp HHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHTTSSEE
T ss_pred HHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHhhCCCCeE
Confidence 345788888877544 66754 46554 5678899999999985211 1224556565566656668999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 258 FLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
.++||||+..|+++.+.+||+-++..+
T Consensus 180 kaaGGirt~~~al~~i~aGa~RiG~S~ 206 (220)
T 1ub3_A 180 KAAGGIRDRETALRMLKAGASRLGTSS 206 (220)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEETT
T ss_pred EEECCCCCHHHHHHHHHCCCcccchhH
Confidence 999999999999999999999666554
No 109
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.23 E-value=2.5e-06 Score=77.09 Aligned_cols=78 Identities=13% Similarity=0.195 Sum_probs=61.9
Q ss_pred CH-HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHc-----C-CCEEE
Q 019244 209 TA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL-----G-ASGIF 281 (344)
Q Consensus 209 ~~-~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalal-----G-Ad~V~ 281 (344)
+. +.++.+.++|++.|.+.+....+...+ +.++.+.++++.+ ++|||++|||++.+|+.+++.+ | |++|+
T Consensus 145 ~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~ 221 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVHTEIEKDGTLQE-HDFSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVI 221 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEEEETTHHHHTCC-CCHHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEeecccccCCc-CCHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEE
Confidence 44 447889999999999865321111122 3578888888877 7999999999999999999998 9 99999
Q ss_pred EchHHHHH
Q 019244 282 IGRPVVYS 289 (344)
Q Consensus 282 ig~~~l~~ 289 (344)
+|+.++.+
T Consensus 222 vgsal~~~ 229 (241)
T 1qo2_A 222 VGRAFLEG 229 (241)
T ss_dssp ECHHHHTT
T ss_pred eeHHHHcC
Confidence 99999863
No 110
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.23 E-value=1.5e-06 Score=102.11 Aligned_cols=199 Identities=16% Similarity=0.139 Sum_probs=111.8
Q ss_pred eecccccccceeecccccccccCChhhHHHHHHHHHcCCccc-----cCCHHHHHHHHHHHHHcC--CcEEEeccC--Cc
Q 019244 64 TVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMV-----YKDRNVVAQLVRRAERAG--FKAIALTVD--TP 134 (344)
Q Consensus 64 ~l~g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~~-----~~d~~~~~~~i~~a~~ag--~~~l~~tvd--~~ 134 (344)
+++| ..||+.+||+++. +.+ .||.|..++|.... +.+++...+.++++++.- -..+.+++- .|
T Consensus 423 ~~lg---~~PIi~a~M~~~~-s~~----~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~~~~~~p~~vNl~~~~p 494 (3089)
T 3zen_D 423 RLTG---RSPILLAGMTPTT-VDA----KIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETLLEPGRAIQFNTLFLDP 494 (3089)
T ss_dssp HHHS---SCSEEECCCHHHH-TSH----HHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHHSCTTCCCEEEEECSCH
T ss_pred hhcC---CCCEEeCCCcCCc-CCH----HHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHhcCCCCceeechhhcCh
Confidence 3556 6799999997543 223 59999999998662 347888888888877632 111222221 11
Q ss_pred cccccHHHHHhhcCCCCcccccccccccccccccccchhhHHHHhhcCCCCC--cHHHHHHHHHhcCCcEEEEeecCHHH
Q 019244 135 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL--SWKDVKWLQTITKLPILVKGVLTAED 212 (344)
Q Consensus 135 ~~g~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~i~~~~~~PvivK~v~~~~~ 212 (344)
.+. ....+. ...+..+...... ...++...+.++. .-+.++.+++. ++.++.=.+.+.++
T Consensus 495 ~~~----~~~~g~-------~~~~~~~~~~g~~------vdgv~~~aG~P~~ee~~~~i~~l~~~-Gi~~i~~~~~t~~~ 556 (3089)
T 3zen_D 495 YLW----KLQVGG-------KRLVQRARQSGAP------IDGLVVSAGIPDLEEAVDIIDELNEV-GISHVVFKPGTVEQ 556 (3089)
T ss_dssp HHH----HHHHHH-------HHHHHHHHHTTCS------CCEEEEESSCCCHHHHHHHHTSTTHH-HHCSEEECCCSHHH
T ss_pred hhh----hhccCH-------HHHHHHHHHcCCC------ceEEEEeCCCCchhHhHHHHHHHHHc-CCEEEEEeCCCHHH
Confidence 110 000000 0000000000000 0000011111111 01234444442 55555423678899
Q ss_pred HHHHHHcCCc------EEEEccC--CCCCCCCchhhHHHHHHHHHHcc--CCCcEEEecCCCCHHHHHHHH---------
Q 019244 213 ARIAVQAGAA------GIIVSNH--GARQLDYVPATIMALEEVVKATQ--GRIPVFLDGGVRRGTDVFKAL--------- 273 (344)
Q Consensus 213 a~~~~~~G~d------~I~v~~~--gG~~~~~g~~~~~~l~~i~~~~~--~~~~via~GGIr~g~dv~kal--------- 273 (344)
++++.+.|+| +|++.|. ||+... ......+.+....++ .++||++.|||.++.++..++
T Consensus 557 a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g~--~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~ 634 (3089)
T 3zen_D 557 IRSVIRIAAEVPTKPVIVHIEGGRAGGHHSW--EDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHG 634 (3089)
T ss_dssp HHHHHHHHTTSTTSCEEEEECCSSSSEECCS--CCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTT
T ss_pred HHHHHHhhhhcCCCcEEEEEeCCCcCCCCCc--ccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccC
Confidence 9999999999 7888763 443221 233444533333322 279999999999999999999
Q ss_pred --HcCCCEEEEchHHHHHh
Q 019244 274 --ALGASGIFIGRPVVYSL 290 (344)
Q Consensus 274 --alGAd~V~ig~~~l~~~ 290 (344)
++|||+|+||+.|+...
T Consensus 635 ~p~lGAdGV~vGTrfl~t~ 653 (3089)
T 3zen_D 635 YPLMPIDGILVGTAAMATL 653 (3089)
T ss_dssp CCCCCCSEEECSSTTTTCT
T ss_pred ccCCCCCEEEecHHHHhCc
Confidence 99999999999998654
No 111
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.20 E-value=3e-06 Score=77.45 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=59.2
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
.+.++.+.+.|++.|.+.+........| +.++.+.++++.+ ++|||++|||++.+|+.+++.+||++|++|+.++.+
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~ 235 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 235 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC--
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcC
Confidence 3557899999999999854211111122 3577787777665 799999999999999999999999999999998763
No 112
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.18 E-value=1.3e-05 Score=70.50 Aligned_cols=79 Identities=24% Similarity=0.293 Sum_probs=61.2
Q ss_pred ecCHHHHHHHHHcCCcEEEEcc-C-CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 207 VLTAEDARIAVQAGAAGIIVSN-H-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 207 v~~~~~a~~~~~~G~d~I~v~~-~-gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
+.+++++..+.+.|+|+|.+++ . ++......+..++.+.++++.. ++||+++|||. .+++.+++.+||++|.+|+
T Consensus 115 ~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 115 VYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp ESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEESH
T ss_pred cCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEhH
Confidence 4678888899999999999864 1 1111112234567777777665 79999999999 9999999999999999999
Q ss_pred HHHH
Q 019244 285 PVVY 288 (344)
Q Consensus 285 ~~l~ 288 (344)
.++.
T Consensus 192 ~i~~ 195 (215)
T 1xi3_A 192 AVMG 195 (215)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9875
No 113
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.16 E-value=2.3e-05 Score=71.96 Aligned_cols=87 Identities=23% Similarity=0.371 Sum_probs=65.0
Q ss_pred HHHHHHhcCCcEEEEee---------cCH---HHH-HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 191 VKWLQTITKLPILVKGV---------LTA---EDA-RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v---------~~~---~~a-~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
+.++.+.+++|+++... .+. +++ +.+.++|+|+|.++.. ..++.+.++.+.+ ++||
T Consensus 137 v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~~---------~~~~~l~~i~~~~--~ipv 205 (273)
T 2qjg_A 137 IAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSYT---------GDIDSFRDVVKGC--PAPV 205 (273)
T ss_dssp HHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECCC---------SSHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECCC---------CCHHHHHHHHHhC--CCCE
Confidence 33333446899998741 344 344 8899999999998731 2456777877766 7999
Q ss_pred EEecCCCC--HHH----HHHHHHcCCCEEEEchHHHH
Q 019244 258 FLDGGVRR--GTD----VFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 258 ia~GGIr~--g~d----v~kalalGAd~V~ig~~~l~ 288 (344)
++.|||++ .+| +.+++.+||++|.+|+.++.
T Consensus 206 va~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 206 VVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQ 242 (273)
T ss_dssp EEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHT
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhC
Confidence 99999995 667 55666899999999999875
No 114
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.16 E-value=3.1e-05 Score=70.99 Aligned_cols=47 Identities=21% Similarity=0.268 Sum_probs=40.1
Q ss_pred HHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhh
Q 019244 242 MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 291 (344)
Q Consensus 242 ~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~ 291 (344)
+.+.++++.. ++||++.+||++++++.+ +..|||+|.+|+.+...+.
T Consensus 196 ~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~~~ 242 (262)
T 2ekc_A 196 KKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKLAG 242 (262)
T ss_dssp HHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHHHH
T ss_pred HHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhhhh
Confidence 4566666654 799999999999999998 8899999999999998653
No 115
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=98.14 E-value=4.3e-06 Score=77.23 Aligned_cols=89 Identities=12% Similarity=0.183 Sum_probs=59.7
Q ss_pred HHHHHHHHHhcCCcEEEEeec-----C-HH----HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHc------
Q 019244 188 WKDVKWLQTITKLPILVKGVL-----T-AE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT------ 251 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v~-----~-~~----~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~------ 251 (344)
.++|..+++..+ +..+|.++ + .+ -++.+.++|+|+|..|+.-+. ....+.....+.++.+..
T Consensus 144 ~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~-~gAT~edv~lm~~~v~~~~~~~~~ 221 (281)
T 2a4a_A 144 TKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKVQ-INATPSSVEYIIKAIKEYIKNNPE 221 (281)
T ss_dssp HHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCSS-CCCCHHHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCC-CCCCHHHHHHHHHHHHHhhccccc
Confidence 456888888764 35678762 3 33 146688999999999852110 001233344444433211
Q ss_pred -cCCCcEEEecCCCCHHHHHHHHHcCCC
Q 019244 252 -QGRIPVFLDGGVRRGTDVFKALALGAS 278 (344)
Q Consensus 252 -~~~~~via~GGIr~g~dv~kalalGAd 278 (344)
+.+++|.++||||+.+|+++.+.+||+
T Consensus 222 tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 222 KNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp GTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred CCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 568999999999999999999999887
No 116
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=98.14 E-value=9.8e-06 Score=72.78 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=66.9
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchh-hHHHHHHHHHHccCCCcEEEecCCCCHHH
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTD 268 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~-~~~~l~~i~~~~~~~~~via~GGIr~g~d 268 (344)
.+...++..++|++. ++.|++++..+.++|+|+|.++- . ... ..+.|..++..++ ++|+++.|||. ..+
T Consensus 110 ~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~vk~FP--a-----~~~~G~~~lk~i~~~~~-~ipvvaiGGI~-~~N 179 (225)
T 1mxs_A 110 DILEAGVDSEIPLLP-GISTPSEIMMGYALGYRRFKLFP--A-----EISGGVAAIKAFGGPFG-DIRFCPTGGVN-PAN 179 (225)
T ss_dssp HHHHHHHHCSSCEEC-EECSHHHHHHHHTTTCCEEEETT--H-----HHHTHHHHHHHHHTTTT-TCEEEEBSSCC-TTT
T ss_pred HHHHHHHHhCCCEEE-eeCCHHHHHHHHHCCCCEEEEcc--C-----ccccCHHHHHHHHhhCC-CCeEEEECCCC-HHH
Confidence 444555557888877 48999999999999999999932 1 011 2456666665543 79999999995 789
Q ss_pred HHHHHH-cCCCEEEEchHHHH
Q 019244 269 VFKALA-LGASGIFIGRPVVY 288 (344)
Q Consensus 269 v~kala-lGAd~V~ig~~~l~ 288 (344)
+...++ .||++|. |+.++.
T Consensus 180 ~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 180 VRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp HHHHHHSTTBCCEE-ECTTSC
T ss_pred HHHHHhccCCEEEE-EchhcC
Confidence 999999 6999999 887764
No 117
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.14 E-value=5.2e-05 Score=68.13 Aligned_cols=71 Identities=23% Similarity=0.265 Sum_probs=52.3
Q ss_pred hhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHh
Q 019244 238 PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALS 316 (344)
Q Consensus 238 ~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~ 316 (344)
+..++-+.++++.. .+++|.++|||+ .+.+.++..+|||.+.+||+++.+ +.....++.++++++......
T Consensus 154 ~~~l~ki~~lr~~~-~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a------~dp~~~~~~l~~~~~~~~~~~ 224 (228)
T 3ovp_A 154 EDMMPKVHWLRTQF-PSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRS------EDPRSVINLLRNVCSEAAQKR 224 (228)
T ss_dssp GGGHHHHHHHHHHC-TTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTC------SCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc-CCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCC------CCHHHHHHHHHHHHHHHHhhc
Confidence 44566677776654 368999999996 899999999999999999987642 122345667777777666543
No 118
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.13 E-value=7.5e-06 Score=82.99 Aligned_cols=74 Identities=19% Similarity=0.139 Sum_probs=62.4
Q ss_pred HHHHHHHHHcCCcEEEEccC--CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHH-cCCCEEEEchHH
Q 019244 210 AEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGRPV 286 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~--gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kala-lGAd~V~ig~~~ 286 (344)
.+.++.+.++|++.|.+.+. .|+ ..| +.++.+.++.+.+ ++|||++|||++.+|+.+++. +||++|++|+.|
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~--~~G-~d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~ 529 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGS--NSG-YDLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMF 529 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTT--CSC-CCHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCC--CCC-CCHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHH
Confidence 57899999999999998542 222 133 4788899998877 799999999999999999998 899999999998
Q ss_pred HH
Q 019244 287 VY 288 (344)
Q Consensus 287 l~ 288 (344)
+.
T Consensus 530 ~~ 531 (555)
T 1jvn_A 530 HR 531 (555)
T ss_dssp HT
T ss_pred Hc
Confidence 75
No 119
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.11 E-value=3e-05 Score=80.44 Aligned_cols=101 Identities=14% Similarity=-0.030 Sum_probs=72.1
Q ss_pred CCcHHHHHHHHHhc--CCcEEEEeec--------CHHH----HHHHHHcCCcEEEEccCCC---C--CCCCch-hhHHHH
Q 019244 185 SLSWKDVKWLQTIT--KLPILVKGVL--------TAED----ARIAVQAGAAGIIVSNHGA---R--QLDYVP-ATIMAL 244 (344)
Q Consensus 185 ~~~~~~i~~i~~~~--~~PvivK~v~--------~~~~----a~~~~~~G~d~I~v~~~gG---~--~~~~g~-~~~~~l 244 (344)
.|..+.++.+|+.+ +.||.+|... +.++ ++.+.+ |+|.+.|+..+- . ...... ......
T Consensus 208 r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 286 (690)
T 3k30_A 208 RLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFV 286 (690)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHH
Confidence 35667899999998 5799999852 2343 455555 899999975320 0 000111 123445
Q ss_pred HHHHHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 245 EEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 245 ~~i~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
..+++.+ ++|||+.|||++++++.++|+.| ||+|++||+++.
T Consensus 287 ~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~ 329 (690)
T 3k30_A 287 AGLKKLT--TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIA 329 (690)
T ss_dssp TTSGGGC--SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHc--CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHh
Confidence 5555555 79999999999999999999998 999999999974
No 120
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.07 E-value=1.8e-05 Score=73.03 Aligned_cols=116 Identities=23% Similarity=0.310 Sum_probs=75.0
Q ss_pred HHHHHHHHHhcCCcEEEEe----ec---CHHHHHHHHHcCCcEEEEccCCCC------------CC--------------
Q 019244 188 WKDVKWLQTITKLPILVKG----VL---TAEDARIAVQAGAAGIIVSNHGAR------------QL-------------- 234 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~----v~---~~~~a~~~~~~G~d~I~v~~~gG~------------~~-------------- 234 (344)
++.++++|+..++|+++=. +. ....++.+.++|+|++++-.-.-. .+
T Consensus 80 ~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~er 159 (271)
T 1ujp_A 80 LELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDAR 159 (271)
T ss_dssp HHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHH
T ss_pred HHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHH
Confidence 5678889888889988721 11 124477788999998877421100 00
Q ss_pred -----------------C--Cc------hhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 235 -----------------D--YV------PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 235 -----------------~--~g------~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
. .| .+..+.+.++++.. ++||++.|||++++++.++ .|||+|.+|+.+...
T Consensus 160 i~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 160 IATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRA 235 (271)
T ss_dssp HHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHH
T ss_pred HHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcc
Confidence 0 01 11134566666544 7999999999999999996 999999999999886
Q ss_pred hhhcChHHHHHHHHHHHHHHHHHH
Q 019244 290 LAAEGEKGVRRVLEMLREEFELAM 313 (344)
Q Consensus 290 ~~~~G~~~v~~~l~~l~~el~~~m 313 (344)
+.. + + .+..+.++|+..+
T Consensus 236 ~~~-~-~----~~~~fv~~l~~~~ 253 (271)
T 1ujp_A 236 LEE-G-R----SLAPLLQEIRQGL 253 (271)
T ss_dssp HHT-T-C----CHHHHHHHHHHHH
T ss_pred cch-H-H----HHHHHHHHHHHHH
Confidence 431 1 2 3344555555444
No 121
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.04 E-value=1.2e-05 Score=72.81 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=60.6
Q ss_pred CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 209 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 209 ~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
..+.++.+.++|++.|.+...-+... .....++.+.++++.+ ++||+++|||++.+|+.++++.|||.|.+|+.++.
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~-~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 113 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTC-SSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccC-CCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhh
Confidence 35778999999999999864311100 1134567788887765 79999999999999999999999999999998763
No 122
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.04 E-value=0.00017 Score=71.79 Aligned_cols=68 Identities=15% Similarity=0.233 Sum_probs=56.2
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
.+.++++.++|+|.|++++.+|+ ....++.+.++++..+ .+|++ .|++.+..++.+++.+|||+|.+|
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~----~~~~~~~i~~l~~~~p-~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGH----SAGVLRKIAEIRAHFP-NRTLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTT----CHHHHHHHHHHHHHCS-SSCEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCeEEEeeecCc----chhHHHHHHHHHHHCC-CCcEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 58899999999999999875542 1245667777777663 78998 899999999999999999999887
No 123
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.00 E-value=5.6e-05 Score=68.55 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=77.3
Q ss_pred CcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEccC---------------C-------------------
Q 019244 186 LSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNH---------------G------------------- 230 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~~~---------------g------------------- 230 (344)
...+.++++.+.+.+|+.+.+- .+.++++.+.++|+|.|++... |
T Consensus 62 ~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~ 141 (243)
T 4gj1_A 62 RQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVA 141 (243)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC
T ss_pred hHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEE
Confidence 3567899999999999999875 7899999999999999988531 1
Q ss_pred ---CCC---------------------------CCC--chhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCC
Q 019244 231 ---ARQ---------------------------LDY--VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGAS 278 (344)
Q Consensus 231 ---G~~---------------------------~~~--g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd 278 (344)
++. .|+ ..+.++.+..+.+.. .++|||++||+++.+|+.+ +..+++
T Consensus 142 ~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~~l~~~l~~~~-~~ipviasGGv~~~~Dl~~-l~~~~~ 219 (243)
T 4gj1_A 142 VNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIF-PNICIQASGGVASLKDLEN-LKGICS 219 (243)
T ss_dssp --------CCBHHHHHHHHHTTTCCEEEEEETTC-----CCCHHHHHHHHHHC-TTSEEEEESCCCSHHHHHH-TTTTCS
T ss_pred ecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCCCHHHHHHHHHhc-CCCCEEEEcCCCCHHHHHH-HHccCc
Confidence 100 011 123566777776654 3699999999999999876 466799
Q ss_pred EEEEchHHHHH
Q 019244 279 GIFIGRPVVYS 289 (344)
Q Consensus 279 ~V~ig~~~l~~ 289 (344)
+|.+|++|+++
T Consensus 220 gvivg~Al~~g 230 (243)
T 4gj1_A 220 GVIVGKALLDG 230 (243)
T ss_dssp EEEECHHHHTT
T ss_pred hhehHHHHHCC
Confidence 99999998763
No 124
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.91 E-value=1.4e-06 Score=78.97 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
+.++.+.++|++.|.+.+........| +.++.+.++++.+ ++|||++|||++.+|+.+++.+|||+|++|++++.
T Consensus 160 ~~a~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~~~~i~~~~--~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 160 DWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCEEEEecccCCCCcCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 457788899999998865311001112 3556777777665 79999999999999999999999999999999875
No 125
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.91 E-value=2.3e-05 Score=77.16 Aligned_cols=115 Identities=16% Similarity=0.218 Sum_probs=85.2
Q ss_pred hcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcC
Q 019244 197 ITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 276 (344)
Q Consensus 197 ~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalG 276 (344)
..++.+++ .+.+.++++++.++|++.|-+-|.+-+.+ .+.++...++.+.++.++++|+.|||.|++|+.++..+
T Consensus 155 ~lgm~~Lv-Evh~~eE~~~A~~lga~iIGinnr~L~t~---~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~- 229 (452)
T 1pii_A 155 SLEMGVLT-EVSNEEEQERAIALGAKVVGINNRDLRDL---SIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF- 229 (452)
T ss_dssp HTTCEEEE-EECSHHHHHHHHHTTCSEEEEESEETTTT---EECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-
T ss_pred HcCCeEEE-EeCCHHHHHHHHHCCCCEEEEeCCCCCCC---CCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-
Confidence 35776665 57899999999999999998877543322 23455555666666667899999999999999999999
Q ss_pred CCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhc
Q 019244 277 ASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 325 (344)
Q Consensus 277 Ad~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~ 325 (344)
|++|.+|+.++.. +.....++.|.. .....||.++.+|..
T Consensus 230 a~avLVGealmr~------~d~~~~~~~l~~---~~~KICGit~~eda~ 269 (452)
T 1pii_A 230 ANGFLIGSALMAH------DDLHAAVRRVLL---GENKVCGLTRGQDAK 269 (452)
T ss_dssp CSEEEECHHHHTC------SCHHHHHHHHHH---CSCEECCCCSHHHHH
T ss_pred CCEEEEcHHHcCC------cCHHHHHHHHHH---HhccccCCCcHHHHH
Confidence 9999999999863 122233444432 234678999988875
No 126
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.89 E-value=1.7e-05 Score=72.75 Aligned_cols=74 Identities=12% Similarity=0.162 Sum_probs=58.0
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccC--CCcEEEecCCCCHHHHHHHHHc--CCCEEEEchHH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG--RIPVFLDGGVRRGTDVFKALAL--GASGIFIGRPV 286 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~--~~~via~GGIr~g~dv~kalal--GAd~V~ig~~~ 286 (344)
+-++.+.++ ++.|.+...---+...| +.++.+.++.+.++. ++|||++|||+|.+|+.+++.+ ||++|++|+.+
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G-~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGG-IDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CC-CCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCC-CCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 778899999 99999854211112234 378889888887622 6999999999999999999998 99999999997
No 127
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.87 E-value=0.00018 Score=66.03 Aligned_cols=91 Identities=29% Similarity=0.487 Sum_probs=66.5
Q ss_pred HHHHHHHH---hcCCcEEEEeec---------CHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHcc
Q 019244 189 KDVKWLQT---ITKLPILVKGVL---------TAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ 252 (344)
Q Consensus 189 ~~i~~i~~---~~~~PvivK~v~---------~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~ 252 (344)
++++++++ .+++|+|+=.-. +++. ++.+.++|+|+|.++.. .+.+.+.++++.+
T Consensus 125 ~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~---------~~~e~~~~~~~~~- 194 (263)
T 1w8s_A 125 EELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYT---------GDPKTFSWAVKVA- 194 (263)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECC---------SSHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhC-
Confidence 34555544 458998763213 4443 46788999999999732 1457777777776
Q ss_pred CCCcEEEecCCC--CHHHHHHHH----HcCCCEEEEchHHHHH
Q 019244 253 GRIPVFLDGGVR--RGTDVFKAL----ALGASGIFIGRPVVYS 289 (344)
Q Consensus 253 ~~~~via~GGIr--~g~dv~kal----alGAd~V~ig~~~l~~ 289 (344)
+.+||+++|||+ +.+|+++.+ ..||+.+.+||.++..
T Consensus 195 ~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 195 GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 345999999999 888888777 8999999999998753
No 128
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.87 E-value=0.0002 Score=65.06 Aligned_cols=101 Identities=19% Similarity=0.229 Sum_probs=70.2
Q ss_pred cHHHHHHHHHhc-CCcEEEEee-cCHH-HHHHHHHcCCcEEEEccC---------------CC---------CC------
Q 019244 187 SWKDVKWLQTIT-KLPILVKGV-LTAE-DARIAVQAGAAGIIVSNH---------------GA---------RQ------ 233 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~v-~~~~-~a~~~~~~G~d~I~v~~~---------------gG---------~~------ 233 (344)
..+.++.+|+.+ ++|+-+... .+++ -++.+.++|+|.|++..- |- +.
T Consensus 73 G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~ 152 (246)
T 3inp_A 73 GPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKY 152 (246)
T ss_dssp CHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTT
T ss_pred CHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHH
Confidence 446788888887 788888774 3443 366777888888888421 10 00
Q ss_pred -------------------CCCchhhHHHHHHHHHHc---cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 234 -------------------LDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 234 -------------------~~~g~~~~~~l~~i~~~~---~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
..+.+.+++-+.++++.. +.+++|.++|||. .+.+.++..+|||.+.+||+++.
T Consensus 153 ~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~ 228 (246)
T 3inp_A 153 VESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFN 228 (246)
T ss_dssp TGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHT
T ss_pred HHhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhC
Confidence 012244566666666543 2368999999999 68899999999999999998764
No 129
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.86 E-value=0.00011 Score=68.51 Aligned_cols=86 Identities=22% Similarity=0.237 Sum_probs=69.5
Q ss_pred HHHHHHHHhcCC-cEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 189 KDVKWLQTITKL-PILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 189 ~~i~~i~~~~~~-PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
+.++.+++..+- ++++ ++-+.++++.+.++|+|+|.+++. +.+.+.++++.+.++++|.++||| +..
T Consensus 197 ~ai~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~~----------~~e~l~~~v~~~~~~~~I~ASGGI-t~~ 264 (296)
T 1qap_A 197 QAVEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDNF----------NTDQMREAVKRVNGQARLEVSGNV-TAE 264 (296)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESSC----------CHHHHHHHHHTTCTTCCEEECCCS-CHH
T ss_pred HHHHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCC-CHH
Confidence 457788877643 5555 577889999999999999999762 345666666666668999999999 899
Q ss_pred HHHHHHHcCCCEEEEchHH
Q 019244 268 DVFKALALGASGIFIGRPV 286 (344)
Q Consensus 268 dv~kalalGAd~V~ig~~~ 286 (344)
.+.+....|+|.+.+|+..
T Consensus 265 ~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 265 TLREFAETGVDFISVGALT 283 (296)
T ss_dssp HHHHHHHTTCSEEECSHHH
T ss_pred HHHHHHHcCCCEEEEeHHH
Confidence 9999999999999999844
No 130
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.86 E-value=8e-05 Score=65.84 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=58.6
Q ss_pred HHHHHHhcCCcEEEEee--cCHHHHHHHHHcCCcEEEEcc-C-CCCCCCCchhhHHHHHHHHHHcc---CCCcEEEecCC
Q 019244 191 VKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSN-H-GARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGV 263 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v--~~~~~a~~~~~~G~d~I~v~~-~-gG~~~~~g~~~~~~l~~i~~~~~---~~~~via~GGI 263 (344)
++++++. +.++++ .+ .++.+.......++|+|.+.+ + |+......+..++.+.++++... .++|++++|||
T Consensus 102 ~~~~~~~-g~~i~~-~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI 179 (220)
T 2fli_A 102 LQKIKAA-GMKAGV-VINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGV 179 (220)
T ss_dssp HHHHHHT-TSEEEE-EECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred HHHHHHc-CCcEEE-EEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcC
Confidence 3555443 555433 33 333444444456789886532 2 22112223334455555554431 26899999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 264 RRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 264 r~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
+ .+++.+++.+||+.|.+||+++.
T Consensus 180 ~-~~~~~~~~~~Gad~vvvGsai~~ 203 (220)
T 2fli_A 180 D-NKTIRACYEAGANVFVAGSYLFK 203 (220)
T ss_dssp C-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred C-HHHHHHHHHcCCCEEEEChHHhC
Confidence 9 79999999999999999999875
No 131
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.85 E-value=0.00012 Score=66.00 Aligned_cols=90 Identities=19% Similarity=0.195 Sum_probs=62.9
Q ss_pred cHHHHHHHHHhc---CCcEEEEee-----cCHHH----HHHHHHcCCcEEEEccCCCCCCCC-chhhHHHHHH--HHHHc
Q 019244 187 SWKDVKWLQTIT---KLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGARQLDY-VPATIMALEE--VVKAT 251 (344)
Q Consensus 187 ~~~~i~~i~~~~---~~PvivK~v-----~~~~~----a~~~~~~G~d~I~v~~~gG~~~~~-g~~~~~~l~~--i~~~~ 251 (344)
..++|..+++.. +.|+ |.+ ++.+. ++.+.++|+|+|+.|...+ . +..+.+.+.. +++.+
T Consensus 118 v~~ei~~v~~a~~~~g~~l--KvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~~----~~~gAt~~dv~l~~m~~~v 191 (234)
T 1n7k_A 118 VYREVSGIVKLAKSYGAVV--KVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGVY----TKGGDPVTVFRLASLAKPL 191 (234)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSSS----CCCCSHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhhcCCeE--EEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCCHHHHHHHHHHHHH
Confidence 345677776654 4554 665 45544 4668899999999985211 1 2345555444 55555
Q ss_pred cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 252 QGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 252 ~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
+ +||.++||||+..|+++.+.+||+-++..+
T Consensus 192 ~--v~VKaaGGirt~~~al~~i~aGa~RiG~S~ 222 (234)
T 1n7k_A 192 G--MGVKASGGIRSGIDAVLAVGAGADIIGTSS 222 (234)
T ss_dssp T--CEEEEESSCCSHHHHHHHHHTTCSEEEETT
T ss_pred C--CCEEEecCCCCHHHHHHHHHcCccccchHH
Confidence 4 999999999999999999999999666554
No 132
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.83 E-value=4.6e-05 Score=70.32 Aligned_cols=88 Identities=15% Similarity=0.113 Sum_probs=68.2
Q ss_pred HHHHHHHHHhcC--CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHcc---CCCcEEEecC
Q 019244 188 WKDVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGG 262 (344)
Q Consensus 188 ~~~i~~i~~~~~--~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~---~~~~via~GG 262 (344)
.+.++.+++..+ +++++ ++.+.++++.+.++|+|+|.+++. ++ +.+.++++.++ .+++|.++||
T Consensus 169 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~-------~~---~~l~~~v~~l~~~~~~~~i~AsGG 237 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDNL-------SV---LETKEIAAYRDAHYPFVLLEASGN 237 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEETC-------CH---HHHHHHHHHHHHHCTTCEEEEESS
T ss_pred HHHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECCC-------CH---HHHHHHHHHhhccCCCcEEEEECC
Confidence 346888888775 46665 678899999999999999999863 23 33444433332 3599999999
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 263 VRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 263 Ir~g~dv~kalalGAd~V~ig~~~l 287 (344)
| +.+.+.+.+..|||.+.+|+.+.
T Consensus 238 I-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 238 I-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp C-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred C-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 9 89999999999999999998754
No 133
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.82 E-value=2.3e-05 Score=69.73 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=63.4
Q ss_pred HHHHHHhcCCcEEEE--eecCHHHHHHHHHcCCcEEEEccC--CCC-CCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 191 VKWLQTITKLPILVK--GVLTAEDARIAVQAGAAGIIVSNH--GAR-QLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 191 i~~i~~~~~~PvivK--~v~~~~~a~~~~~~G~d~I~v~~~--gG~-~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
++.+++ .+++.++. ++.|+++++.+.+.|+|.+.+... ++. ....++..+..++++. +.++|++++|||+
T Consensus 102 ~~~~~~-~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~---~~~~pi~v~GGI~- 176 (218)
T 3jr2_A 102 KKVADE-LNGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLS---ALGIELSITGGIV- 176 (218)
T ss_dssp HHHHHH-HTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHH---HTTCEEEEESSCC-
T ss_pred HHHHHH-hCCccceeeeecCCHHHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHh---CCCCCEEEECCCC-
Confidence 444544 36665532 346888899999999999876311 110 0112333444444443 2379999999995
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHH
Q 019244 266 GTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
..++.+++.+|||.+.+||+++.+
T Consensus 177 ~~~~~~~~~aGAd~vvvGsaI~~a 200 (218)
T 3jr2_A 177 PEDIYLFEGIKTKTFIAGRALAGA 200 (218)
T ss_dssp GGGGGGGTTSCEEEEEESGGGSHH
T ss_pred HHHHHHHHHcCCCEEEEchhhcCC
Confidence 899999999999999999998753
No 134
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.81 E-value=7.3e-05 Score=68.09 Aligned_cols=87 Identities=13% Similarity=0.163 Sum_probs=68.0
Q ss_pred cCCcEEEEeecCHHHHHHHHHc-CCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcC
Q 019244 198 TKLPILVKGVLTAEDARIAVQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 276 (344)
Q Consensus 198 ~~~PvivK~v~~~~~a~~~~~~-G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalG 276 (344)
.++-+++ .+.+.++++++.++ |+|.|-+-|.+-+.. ...++...++.+.++.++++|+.|||.|++|+.++..+
T Consensus 149 lGl~~lv-Ev~~~eE~~~A~~l~g~~iIGinnr~l~t~---~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~- 223 (251)
T 1i4n_A 149 LGMDSLV-EVHSREDLEKVFSVIRPKIIGINTRDLDTF---EIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK- 223 (251)
T ss_dssp TTCEEEE-EECSHHHHHHHHTTCCCSEEEEECBCTTTC---CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-
T ss_pred cCCeEEE-EeCCHHHHHHHHhcCCCCEEEEeCcccccC---CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-
Confidence 4666655 57899999999999 999998877542222 22344444555556667899999999999999999999
Q ss_pred CCEEEEchHHHHH
Q 019244 277 ASGIFIGRPVVYS 289 (344)
Q Consensus 277 Ad~V~ig~~~l~~ 289 (344)
|++|.+|+.++.+
T Consensus 224 a~avLVG~aimr~ 236 (251)
T 1i4n_A 224 VNAVLVGTSIMKA 236 (251)
T ss_dssp CSEEEECHHHHHC
T ss_pred CCEEEEcHHHcCC
Confidence 9999999999874
No 135
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.77 E-value=0.00016 Score=65.29 Aligned_cols=76 Identities=17% Similarity=0.226 Sum_probs=58.6
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
.+.++.+.++|+|.|.+....+.. ......++.+.++++.. ++||++.|||++..|+.+++++|||.|.+|+..+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITASV-EKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCSS-SHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCchhh-cCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 356788899999999987532211 11223455667766544 79999999999999999999999999999998764
No 136
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.76 E-value=0.00016 Score=65.34 Aligned_cols=76 Identities=26% Similarity=0.302 Sum_probs=58.7
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
.+.++.+.++|+|.|.++...+. .......++.+.++++.. ++||++.|||++..++.+++++|||.|.+|+.++.
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISAT-HEERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSS-TTCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCcc-ccCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 46678889999999988742211 011233456677776654 79999999999999999999999999999998874
No 137
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.76 E-value=3.4e-05 Score=70.56 Aligned_cols=88 Identities=25% Similarity=0.258 Sum_probs=61.0
Q ss_pred cHHHHHHHHHhcC-CcEEEEee-----cC-HH----HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHH-----
Q 019244 187 SWKDVKWLQTITK-LPILVKGV-----LT-AE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA----- 250 (344)
Q Consensus 187 ~~~~i~~i~~~~~-~PvivK~v-----~~-~~----~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~----- 250 (344)
..++|+.+++..+ .+..+|.+ ++ .+ -++.+.++|+|+|..|+.-+ .+..+.+.+..+++.
T Consensus 119 v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~----~~gAt~e~v~lm~~~I~~~~ 194 (260)
T 1p1x_A 119 GFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKV----AVNATPESARIMMEVIRDMG 194 (260)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCCSCS----SCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHHHHHhc
Confidence 4567888888763 24567776 23 33 24568899999999985211 122355544434433
Q ss_pred ccCCCcEEEecCCCCHHHHHHHHHcCCC
Q 019244 251 TQGRIPVFLDGGVRRGTDVFKALALGAS 278 (344)
Q Consensus 251 ~~~~~~via~GGIr~g~dv~kalalGAd 278 (344)
++.+++|-++||||+.+|+++.+.+||+
T Consensus 195 ~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 195 VEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp CTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred CCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 4568999999999999999999999886
No 138
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.69 E-value=0.00033 Score=62.61 Aligned_cols=77 Identities=26% Similarity=0.296 Sum_probs=60.5
Q ss_pred CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 209 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 209 ~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
..+.++.+.++|+|+|.++...+.. .......+.+.++++.. ++||++.|||++..++.+++.+|||+|.++++++.
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 4577889999999999987532211 11223456677777765 79999999999999999999999999999998764
No 139
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.67 E-value=0.00057 Score=61.02 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=67.2
Q ss_pred HHHHHHHHHhcCCcEEEEee-cCH-HHHHHHHHc--CCcEEEEcc-C-CCCCCCCchhhHHHHHHHHHHccCCCcEEEec
Q 019244 188 WKDVKWLQTITKLPILVKGV-LTA-EDARIAVQA--GAAGIIVSN-H-GARQLDYVPATIMALEEVVKATQGRIPVFLDG 261 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v-~~~-~~a~~~~~~--G~d~I~v~~-~-gG~~~~~g~~~~~~l~~i~~~~~~~~~via~G 261 (344)
.+.++.+++. ++++++-.. .++ +..+...+. ++|+|.+.. + |+....+.+..++.+.++++... ++||.++|
T Consensus 103 ~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~-~~pi~v~G 180 (228)
T 1h1y_A 103 QELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYP-SLDIEVDG 180 (228)
T ss_dssp HHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TSEEEEES
T ss_pred HHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 3457777664 666665432 233 334455555 999998853 2 22222234455667777777653 79999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 262 GVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 262 GIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
||.. +++.+++..|||.+.+||.++.
T Consensus 181 GI~~-~ni~~~~~aGaD~vvvGsai~~ 206 (228)
T 1h1y_A 181 GLGP-STIDVAASAGANCIVAGSSIFG 206 (228)
T ss_dssp SCST-TTHHHHHHHTCCEEEESHHHHT
T ss_pred CcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 9997 8898999999999999999874
No 140
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.66 E-value=0.00014 Score=66.97 Aligned_cols=70 Identities=17% Similarity=0.151 Sum_probs=56.8
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
+..+.+.|...|.+...+ .+...+.+.++++.+...+||++.|||||.+|+.+++.+|||.|.+|+.++.
T Consensus 192 a~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp HHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred HHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 345567888899888533 2345678888888764369999999999999999999999999999999864
No 141
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.61 E-value=0.00024 Score=66.32 Aligned_cols=86 Identities=20% Similarity=0.211 Sum_probs=66.2
Q ss_pred HHHHHHHHhcC--CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHcc---CCCcEEEecCC
Q 019244 189 KDVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGV 263 (344)
Q Consensus 189 ~~i~~i~~~~~--~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~---~~~~via~GGI 263 (344)
+.++.+++..+ +++++ ++.+.++++.+.++|+|+|.+++. ++ +.+.++++.++ .+++|.++|||
T Consensus 185 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~-------~~---~~l~~~v~~l~~~~~~~~I~ASGGI 253 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDNF-------KP---EELHPTATVLKAQFPSVAVEASGGI 253 (299)
T ss_dssp HHHHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC-------CH---HHHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCC-------CH---HHHHHHHHHhhccCCCeeEEEECCC
Confidence 45777877764 46665 678899999999999999999863 23 33444333332 35999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchHH
Q 019244 264 RRGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 264 r~g~dv~kalalGAd~V~ig~~~ 286 (344)
+...+.+....|||.+.+|+.+
T Consensus 254 -t~~ni~~~~~aGaD~i~vGs~i 275 (299)
T 2jbm_A 254 -TLDNLPQFCGPHIDVISMGMLT 275 (299)
T ss_dssp -CTTTHHHHCCTTCCEEECTHHH
T ss_pred -CHHHHHHHHHCCCCEEEEChhh
Confidence 8999999999999999999854
No 142
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=97.60 E-value=0.0013 Score=62.98 Aligned_cols=100 Identities=15% Similarity=-0.001 Sum_probs=66.9
Q ss_pred CcHHHHHHHHHhcC-CcEEEEeecC-----------H----HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHH
Q 019244 186 LSWKDVKWLQTITK-LPILVKGVLT-----------A----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK 249 (344)
Q Consensus 186 ~~~~~i~~i~~~~~-~PvivK~v~~-----------~----~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~ 249 (344)
|..+.++.||+.++ -+|.+|...+ . ..++.+.+.|++.+.++...-..............++++
T Consensus 204 f~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~ 283 (358)
T 4a3u_A 204 LLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRK 283 (358)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHH
Confidence 45678999999884 5688887511 1 225677889999999875321111000011122344555
Q ss_pred HccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHH
Q 019244 250 ATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 288 (344)
Q Consensus 250 ~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~ 288 (344)
.. ..||+ .||+.+.+++.++|+-| ||+|++||+++.
T Consensus 284 ~~--~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~la 320 (358)
T 4a3u_A 284 VF--KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIG 320 (358)
T ss_dssp HC--CSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHH
T ss_pred hc--CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHh
Confidence 54 45555 58889999999999999 999999999985
No 143
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.60 E-value=0.00031 Score=62.64 Aligned_cols=47 Identities=21% Similarity=0.339 Sum_probs=37.2
Q ss_pred HHHHHHHHHHcc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 241 IMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 241 ~~~l~~i~~~~~---~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
++.+.++++... .++|++++|||+ .+++.+++..|||+|.+||+++.
T Consensus 163 ~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~ 212 (230)
T 1rpx_A 163 VKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 212 (230)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhC
Confidence 344555555432 268999999999 78998999999999999999874
No 144
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.59 E-value=0.00054 Score=63.49 Aligned_cols=86 Identities=26% Similarity=0.320 Sum_probs=67.7
Q ss_pred HHHHHHHhcC--CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 190 DVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 190 ~i~~i~~~~~--~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
.++..|+..+ .+|.+ .+.+.++++.+.++|+|+|.+++. ..+.++++.+.+++++|+.++|||. .+
T Consensus 185 av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~~----------~~~~~k~av~~v~~~ipi~AsGGIt-~e 252 (286)
T 1x1o_A 185 AVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDNF----------PLEALREAVRRVGGRVPLEASGNMT-LE 252 (286)
T ss_dssp HHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEESC----------CHHHHHHHHHHHTTSSCEEEESSCC-HH
T ss_pred HHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCCC-HH
Confidence 5778887763 46665 678899999999999999999763 2234555555555579999999996 89
Q ss_pred HHHHHHHcCCCEEEEchHHH
Q 019244 268 DVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 268 dv~kalalGAd~V~ig~~~l 287 (344)
.+.+..+.|+|.+.+|+...
T Consensus 253 ni~~~a~tGvD~IsVgs~~~ 272 (286)
T 1x1o_A 253 RAKAAAEAGVDYVSVGALTH 272 (286)
T ss_dssp HHHHHHHHTCSEEECTHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHc
Confidence 99999999999999987543
No 145
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.55 E-value=0.00042 Score=62.12 Aligned_cols=76 Identities=25% Similarity=0.247 Sum_probs=59.5
Q ss_pred CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 209 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 209 ~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
..+.++.+.++|+|.|.+..--+.. ...+.. ..+.++++.. ++|+++.|||++..++.+++++|||.|.+|+..+.
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAF-GRGSNH-ELLAEVVGKL--DVQVELSGGIRDDESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHT-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccc-cCCChH-HHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhh
Confidence 3467888999999999997421111 112334 7778887766 79999999999999999999999999999998764
No 146
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=97.54 E-value=0.00031 Score=63.78 Aligned_cols=114 Identities=21% Similarity=0.279 Sum_probs=78.8
Q ss_pred HHHHHHHHH-cC-Ccc-----------ccCCHHHHHHHHHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCcccccc
Q 019244 91 YATARAASA-AG-TIM-----------VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKN 157 (344)
Q Consensus 91 ~~lA~aA~~-~g-~~~-----------~~~d~~~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~~~~~ 157 (344)
..+|+-|++ .+ +-. .+.|+..+.+..++..+.|++.+.++.|.|..++|..+....+-.|.+.
T Consensus 90 v~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~---- 165 (265)
T 1wv2_A 90 VRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAG---- 165 (265)
T ss_dssp HHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSS----
T ss_pred HHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCc----
Confidence 467888888 43 333 2467777666777777889999988889898877765432111011100
Q ss_pred cccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhcCCcEEEEe-ecCHHHHHHHHHcCCcEEEEcc
Q 019244 158 FQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.+.. +.+-.+++.|+.+++..++|||+.+ +.+++++..+.+.|+|+|.|..
T Consensus 166 -------------------pIGs-G~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 166 -------------------LIGS-GLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp -------------------STTC-CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred -------------------cCCC-CCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 0000 1122368889999998899999984 6899999999999999999954
No 147
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.54 E-value=0.00048 Score=63.56 Aligned_cols=86 Identities=19% Similarity=0.107 Sum_probs=57.3
Q ss_pred HHHHHHHHHhcCCcEEEEee-----cC-HHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHc------
Q 019244 188 WKDVKWLQTITKLPILVKGV-----LT-AED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT------ 251 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v-----~~-~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~------ 251 (344)
.++|+.+++..+ +.++|.+ ++ .+. .+.+.++|+|+|..|+.-+ .+..+++.+.-+++.+
T Consensus 138 ~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~----~~gAT~edV~lM~~~v~~~~~~ 212 (297)
T 4eiv_A 138 RLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSSGLG----ATHATMFTVHLISIALREYMVR 212 (297)
T ss_dssp HHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCC----CCCCCHHHHHHHHHHHHHHhcc
Confidence 356888888875 6678887 33 332 3567899999999986322 1123444333333333
Q ss_pred ----------------cCCCcEEEe-cCCCCHHHHHHHHHcCCC
Q 019244 252 ----------------QGRIPVFLD-GGVRRGTDVFKALALGAS 278 (344)
Q Consensus 252 ----------------~~~~~via~-GGIr~g~dv~kalalGAd 278 (344)
++++.|-++ ||||+.+|+.+.+.+..+
T Consensus 213 ~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~e 256 (297)
T 4eiv_A 213 ENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQMIFE 256 (297)
T ss_dssp ------------------CCEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCceeEEecCCCCCCHHHHHHHHHHHHH
Confidence 358999999 999999999999994433
No 148
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.52 E-value=0.00045 Score=63.88 Aligned_cols=85 Identities=15% Similarity=0.223 Sum_probs=67.7
Q ss_pred HHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHH
Q 019244 190 DVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 268 (344)
Q Consensus 190 ~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~d 268 (344)
.++..++.. .+|+.| ++-|.++++.+.++|+|.|.++|. +.+.+.++.+.+++++++.+||||. .+.
T Consensus 188 Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn~----------~~~~l~~av~~~~~~v~ieaSGGIt-~~~ 255 (287)
T 3tqv_A 188 AVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDNF----------SGEDIDIAVSIARGKVALEVSGNID-RNS 255 (287)
T ss_dssp HHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTTCEEEEESSCC-TTT
T ss_pred HHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHhhcCCceEEEECCCC-HHH
Confidence 466666654 467776 788999999999999999999873 2355666666666689999999995 788
Q ss_pred HHHHHHcCCCEEEEchHH
Q 019244 269 VFKALALGASGIFIGRPV 286 (344)
Q Consensus 269 v~kalalGAd~V~ig~~~ 286 (344)
+.++...|+|.+.+|...
T Consensus 256 i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 256 IVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp HHHHHTTTCSEEECSHHH
T ss_pred HHHHHHcCCCEEEEChhh
Confidence 888888999999998754
No 149
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.52 E-value=0.00023 Score=63.91 Aligned_cols=49 Identities=18% Similarity=0.325 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHcc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 239 ATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 239 ~~~~~l~~i~~~~~---~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
..++.+.++++... .++||.++|||.. +++.++...|||.+.+||.++.
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~ 206 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN 206 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 34566777766542 2699999999997 8899999999999999999874
No 150
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.51 E-value=0.0011 Score=61.69 Aligned_cols=88 Identities=26% Similarity=0.389 Sum_probs=60.4
Q ss_pred HHHHHHHH---hcCCcEEEEe------ecCHH----HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCC
Q 019244 189 KDVKWLQT---ITKLPILVKG------VLTAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI 255 (344)
Q Consensus 189 ~~i~~i~~---~~~~PvivK~------v~~~~----~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~ 255 (344)
+++.++++ .+++|+++=- ..+++ .++.+.++|+|+|.++-.+ +.+.++.+.. ++
T Consensus 158 ~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t~-----------e~~~~vv~~~--~v 224 (295)
T 3glc_A 158 KNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVE-----------KGFERIVAGC--PV 224 (295)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECCT-----------TTHHHHHHTC--SS
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCCH-----------HHHHHHHHhC--CC
Confidence 34444444 3579988711 12333 4677889999999996221 2355666544 79
Q ss_pred cEEEecCCCCHH-----HHHHHHHcCCCEEEEchHHHHH
Q 019244 256 PVFLDGGVRRGT-----DVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 256 ~via~GGIr~g~-----dv~kalalGAd~V~ig~~~l~~ 289 (344)
||+++||+.... .+.+++.+||+.+.+||.++..
T Consensus 225 PVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 225 PIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp CEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 999999999542 4556778999999999998753
No 151
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.51 E-value=9.2e-05 Score=69.05 Aligned_cols=86 Identities=19% Similarity=0.168 Sum_probs=54.5
Q ss_pred HHHHHHHHhcC--CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCC------CcEEEe
Q 019244 189 KDVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR------IPVFLD 260 (344)
Q Consensus 189 ~~i~~i~~~~~--~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~------~~via~ 260 (344)
+.++.+++..+ +++++ ++.+.++++.+.++|+|+|.+++.+ .+.+.++++.+.+. ++|.++
T Consensus 187 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~g~~~v~I~AS 255 (294)
T 3c2e_A 187 NAVKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDNFK----------GDGLKMCAQSLKNKWNGKKHFLLECS 255 (294)
T ss_dssp HHHHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC-------------------------------CCEEEEE
T ss_pred HHHHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhcccccCCCCeEEEEE
Confidence 45777877764 45665 6778899999999999999997632 23344444444333 999999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHH
Q 019244 261 GGVRRGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 261 GGIr~g~dv~kalalGAd~V~ig~~~ 286 (344)
||| +.+.+.+....|||.+.+|+.+
T Consensus 256 GGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 256 GGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp CCC-CC------CCCSCSEEECGGGT
T ss_pred CCC-CHHHHHHHHHcCCCEEEEechh
Confidence 999 8999999999999999999874
No 152
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=97.50 E-value=8.9e-05 Score=72.11 Aligned_cols=99 Identities=17% Similarity=0.025 Sum_probs=68.1
Q ss_pred HHHHHHHHHhcC-CcEEEEeec-----------C--------HHHHHHH---HHcC--CcEEEEccCCC-CCCCCchh-h
Q 019244 188 WKDVKWLQTITK-LPILVKGVL-----------T--------AEDARIA---VQAG--AAGIIVSNHGA-RQLDYVPA-T 240 (344)
Q Consensus 188 ~~~i~~i~~~~~-~PvivK~v~-----------~--------~~~a~~~---~~~G--~d~I~v~~~gG-~~~~~g~~-~ 240 (344)
.+.++.+|+.++ -||.+|... + .+.++.+ .+.| +|+|.|+.... .+.+..+. .
T Consensus 222 ~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~ 301 (407)
T 3tjl_A 222 LELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQ 301 (407)
T ss_dssp HHHHHHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGC
T ss_pred HHHHHHHHHHhCCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccch
Confidence 456889998885 589999862 2 1235677 7889 99999974211 11111111 1
Q ss_pred HHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHc---C-CCEEEEchHHHH
Q 019244 241 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---G-ASGIFIGRPVVY 288 (344)
Q Consensus 241 ~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalal---G-Ad~V~ig~~~l~ 288 (344)
...+..+++.. ++|||+.|||.+..|+.+++.. | ||+|++||+++.
T Consensus 302 ~~~~~~ir~~~--~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia 351 (407)
T 3tjl_A 302 AGDNEFVSKIW--KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTS 351 (407)
T ss_dssp CCCSHHHHHHC--CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHH
T ss_pred hHHHHHHHHHh--CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhh
Confidence 12344555555 6899999999999988888776 5 999999999985
No 153
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.50 E-value=0.00017 Score=65.65 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=58.8
Q ss_pred CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 209 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 209 ~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
..+.++.+.++|++.|.++...+... ......+.+.++++.. ++||++.|||++..|+.+++.+|||.|.+|+.++
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 45678899999999999965221111 1123567777776654 7999999999999999999999999999999877
No 154
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=97.49 E-value=0.0014 Score=58.41 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=83.3
Q ss_pred cHHH---HHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHc---cCCCcEEEe
Q 019244 187 SWKD---VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLD 260 (344)
Q Consensus 187 ~~~~---i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~---~~~~~via~ 260 (344)
+|+- ++.+.+. ++++-+=.+.|..+|..+.++|+++|-. .-||-.|++.+.+..+.++.+.. +.+..|++.
T Consensus 90 T~eGl~A~~~L~~~-GI~vn~TlifS~~QA~~Aa~AGa~yISP--fvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~IlaA 166 (223)
T 3s1x_A 90 TEDGLRAIKTLSSE-HINTNCTLVFNPIQALLAAKAGVTYVSP--FVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVA 166 (223)
T ss_dssp SHHHHHHHHHHHHT-TCCEEEEEECSHHHHHHHHHTTCSEEEE--BSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEEB
T ss_pred CHHHHHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHcCCeEEEe--ecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 5654 4444443 8999888899999999999999998855 45665566655566666665543 335666664
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcC--hHHHHHHHHHHH
Q 019244 261 GGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEMLR 306 (344)
Q Consensus 261 GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G--~~~v~~~l~~l~ 306 (344)
.+|+..++.++..+|||.+-+.-.++..+..+- ..|++++.+.|.
T Consensus 167 -S~Rn~~~v~~aa~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~Dw~ 213 (223)
T 3s1x_A 167 -SIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKFLEDWK 213 (223)
T ss_dssp -SCCSHHHHHHHHHHTCSEEEECHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred -eCCCHHHHHHHHHcCCCEEEeCHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 599999999999999999999988887765321 245666666554
No 155
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.48 E-value=0.00026 Score=62.56 Aligned_cols=80 Identities=16% Similarity=0.132 Sum_probs=58.3
Q ss_pred ecCHHHHHHHHHcCCcEEEEccCC--CCCCCC-chhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 207 VLTAEDARIAVQAGAAGIIVSNHG--ARQLDY-VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 207 v~~~~~a~~~~~~G~d~I~v~~~g--G~~~~~-g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
+.+++++..+. .|+|+|.++.-- .+..+. .+..++.+.++.+.+..++||++.|||. .+++.+++.+||++|.++
T Consensus 95 ~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~ 172 (210)
T 3ceu_A 95 CHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVL 172 (210)
T ss_dssp ECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEES
T ss_pred cCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEh
Confidence 57899999888 999999975421 110111 1224566777665421279999999998 899999999999999999
Q ss_pred hHHHH
Q 019244 284 RPVVY 288 (344)
Q Consensus 284 ~~~l~ 288 (344)
+.++.
T Consensus 173 s~i~~ 177 (210)
T 3ceu_A 173 GDLWN 177 (210)
T ss_dssp HHHHT
T ss_pred HHhHc
Confidence 99864
No 156
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.48 E-value=0.0013 Score=60.31 Aligned_cols=97 Identities=16% Similarity=0.233 Sum_probs=65.3
Q ss_pred ecCHHHHHHHHHcCCcEEEEccC---CCC---CCCCchhh-HHHHHHHH---HHccCCCcEEEec-CCCCHHHHHHHHHc
Q 019244 207 VLTAEDARIAVQAGAAGIIVSNH---GAR---QLDYVPAT-IMALEEVV---KATQGRIPVFLDG-GVRRGTDVFKALAL 275 (344)
Q Consensus 207 v~~~~~a~~~~~~G~d~I~v~~~---gG~---~~~~g~~~-~~~l~~i~---~~~~~~~~via~G-GIr~g~dv~kalal 275 (344)
+.++++++.+.++|+|.|++.-. ||. ........ .+.+.++. +.+.+++-|+.-| ||.+++|+.+++.+
T Consensus 170 v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~ 249 (286)
T 2p10_A 170 VFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDS 249 (286)
T ss_dssp ECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhc
Confidence 47999999999999999998422 221 00111111 23333333 3345577777666 99999999999999
Q ss_pred --CCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHH
Q 019244 276 --GASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 310 (344)
Q Consensus 276 --GAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~ 310 (344)
|++.+..++.+... . ++..+..+.++++
T Consensus 250 t~G~~G~~gASsier~------p-~e~ai~~~~~~fk 279 (286)
T 2p10_A 250 CQGCHGFYGASSMERL------P-AEEAIRSQTLAFK 279 (286)
T ss_dssp CTTCCEEEESHHHHHH------H-HHHHHHHHHHHHH
T ss_pred CCCccEEEeehhhhcC------C-HHHHHHHHHHHHH
Confidence 99999999998774 2 4555666665554
No 157
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.48 E-value=0.002 Score=64.00 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=53.8
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
.+.+..+.++|+|.|.+....|. ....++.+.++++..+ ++||++ |++.+.+++.++..+|||++.++
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~----~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGH----SRRVIETLEMIKADYP-DLPVVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEecCCc----hHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 57788999999999999653231 1236677888887764 588887 77899999999999999999984
No 158
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.47 E-value=0.0005 Score=61.76 Aligned_cols=75 Identities=25% Similarity=0.272 Sum_probs=58.3
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
.+.++.+.++|+|.|.+...-+.. ...... ..+.++++.. ++|+++.|||++..++.+++.+|||.|.+|+..+.
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAAF-GTGDNR-ALIAEVAQAM--DIKVELSGGIRDDDTLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHH-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCchhh-cCCChH-HHHHHHHHhc--CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhh
Confidence 456788899999999986521110 112334 6777777765 79999999999999999999999999999997764
No 159
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.47 E-value=0.00081 Score=60.24 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=51.8
Q ss_pred HHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 216 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 216 ~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
+.-.|...|.+.. .|+ ....+.+.++++.+. ++||++-|||++++++.+++ .|||.|.+|+.+..
T Consensus 149 a~~~g~~~VYld~-sG~-----~~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~ 213 (228)
T 3vzx_A 149 SELLQLPIFYLEY-SGV-----LGDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYE 213 (228)
T ss_dssp HHHTTCSEEEEEC-TTS-----CCCHHHHHHHHHHCS-SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHH
T ss_pred HHHcCCCEEEecC-CCC-----cCCHHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhc
Confidence 3445689998877 333 125677888887652 59999999999999999887 79999999999976
No 160
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.46 E-value=0.0001 Score=66.26 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=57.7
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
.+.++.+.++|+|.|.++...... ......++.+.++. .. ++||++.|||++..|+.+++.+|||.|.+|+.++.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVVDLSNAI-ENSGENLPVLEKLS-EF--AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLE 107 (241)
T ss_dssp HHHHHHHHHTTCCCEEEEEHHHHH-HCCCTTHHHHHHGG-GG--GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecccccc-cCCchhHHHHHHHH-hc--CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhh
Confidence 466888999999999987421100 01124566677766 44 69999999999999999999999999999998764
No 161
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.44 E-value=0.0009 Score=62.73 Aligned_cols=86 Identities=21% Similarity=0.281 Sum_probs=68.2
Q ss_pred HHHHHHHHhcC-CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 189 KDVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 189 ~~i~~i~~~~~-~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
+.++..++..+ .|+.| ++-|.++++.++++|+|.|.++|. +.+.+.++++.++++++|.+||||. ..
T Consensus 220 ~Av~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~ieaSGGIt-~~ 287 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALENSGNIT-LD 287 (320)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-HH
T ss_pred HHHHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCCC-HH
Confidence 35777777663 56665 688999999999999999999873 3355667666666689999999997 77
Q ss_pred HHHHHHHcCCCEEEEchHH
Q 019244 268 DVFKALALGASGIFIGRPV 286 (344)
Q Consensus 268 dv~kalalGAd~V~ig~~~ 286 (344)
.+.+....|+|.+.+|+..
T Consensus 288 ~I~~~a~tGVD~isvGalt 306 (320)
T 3paj_A 288 NLKECAETGVDYISVGALT 306 (320)
T ss_dssp HHHHHHTTTCSEEECTHHH
T ss_pred HHHHHHHcCCCEEEECcee
Confidence 7777778999999999843
No 162
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.42 E-value=0.00099 Score=59.84 Aligned_cols=101 Identities=18% Similarity=0.176 Sum_probs=68.7
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCHHH-HHHHHHcCCcEEEEccCC-C------------------------CC------
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTAED-ARIAVQAGAAGIIVSNHG-A------------------------RQ------ 233 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~~~-a~~~~~~G~d~I~v~~~g-G------------------------~~------ 233 (344)
....++.+|+.++.|+-+-.- .+++. ++.+.++|+|+|++..-- . +.
T Consensus 45 G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~ 124 (231)
T 3ctl_A 45 SPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKY 124 (231)
T ss_dssp CHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTT
T ss_pred cHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHH
Confidence 456788888877777776653 34443 677888888888764211 1 00
Q ss_pred -------------------CCCchhhHHHHHHHHHHcc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEEc-hHHHH
Q 019244 234 -------------------LDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIG-RPVVY 288 (344)
Q Consensus 234 -------------------~~~g~~~~~~l~~i~~~~~---~~~~via~GGIr~g~dv~kalalGAd~V~ig-~~~l~ 288 (344)
..+.+..++-+.++++... .+++|.++|||. .+.+.++..+|||.+.+| |.++.
T Consensus 125 ~l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~ 201 (231)
T 3ctl_A 125 YIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFN 201 (231)
T ss_dssp TGGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGG
T ss_pred HHhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhC
Confidence 0122345555666665542 268999999998 678889999999999999 87764
No 163
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=97.40 E-value=0.0016 Score=57.63 Aligned_cols=115 Identities=20% Similarity=0.157 Sum_probs=82.4
Q ss_pred cHHH---HHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHc---cCCCcEEEe
Q 019244 187 SWKD---VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLD 260 (344)
Q Consensus 187 ~~~~---i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~---~~~~~via~ 260 (344)
+|+- ++.+.+. ++++-+=.+.|..+|..+.++|+++|-. .-||-.|++.+.+..+.++.+.. +.+..|++.
T Consensus 88 T~eGl~A~~~L~~~-GI~vn~TlifS~~Qa~~Aa~AGa~yISP--fvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ilaA 164 (212)
T 3r8r_A 88 TSDGLKAVRALTDL-GIKTNVTLIFNANQALLAARAGATYVSP--FLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAA 164 (212)
T ss_dssp SHHHHHHHHHHHHT-TCCEEEEEECSHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEEB
T ss_pred CHHHHHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHcCCeEEEe--ccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEEe
Confidence 5554 4444443 8999888899999999999999998855 44565566666666666665543 335666664
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcC--hHHHHHHHHHH
Q 019244 261 GGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEML 305 (344)
Q Consensus 261 GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G--~~~v~~~l~~l 305 (344)
.+|+..++.++..+|||.+-+.-.++..+..+- ..|++++.+.|
T Consensus 165 -S~R~~~~v~~~a~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~Dw 210 (212)
T 3r8r_A 165 -SIRHPQHVTEAALRGAHIGTMPLKVIHALTKHPLTDKGIEQFLADW 210 (212)
T ss_dssp -SCCSHHHHHHHHHTTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred -cCCCHHHHHHHHHcCCCEEEcCHHHHHHHHcCCcHHHHHHHHHHHh
Confidence 599999999999999999999988887665321 24555555554
No 164
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.40 E-value=0.00048 Score=60.65 Aligned_cols=80 Identities=18% Similarity=0.239 Sum_probs=56.7
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC-HHHHHHHHHcCCCEEEEchHHHHHhh
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFIGRPVVYSLA 291 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~-g~dv~kalalGAd~V~ig~~~l~~~~ 291 (344)
++.+.+.|+++++++.+ ..+.+.++++..+ .-+++++|||+. +.++.+++++|||.+.+||+++.+
T Consensus 125 ~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~-~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a-- 191 (208)
T 2czd_A 125 IEVANEIEPFGVIAPGT----------RPERIGYIRDRLK-EGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA-- 191 (208)
T ss_dssp HHHHHHHCCSEEECCCS----------STHHHHHHHHHSC-TTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS--
T ss_pred HHHHHHhCCcEEEECCC----------ChHHHHHHHHhCC-CCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC--
Confidence 56778899999987643 1244556666653 334779999996 568999999999999999998863
Q ss_pred hcChHHHHHHHHHHHHHH
Q 019244 292 AEGEKGVRRVLEMLREEF 309 (344)
Q Consensus 292 ~~G~~~v~~~l~~l~~el 309 (344)
.. ..+.++.+++++
T Consensus 192 -~d---p~~~~~~l~~~i 205 (208)
T 2czd_A 192 -PN---PREAAKAIYDEI 205 (208)
T ss_dssp -SS---HHHHHHHHHHHH
T ss_pred -CC---HHHHHHHHHHHH
Confidence 12 334555565554
No 165
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.34 E-value=0.0028 Score=63.33 Aligned_cols=68 Identities=16% Similarity=0.223 Sum_probs=52.6
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
.+.++.+.++|+|+|.+....|. -...++.+.++++.+ +++||++ |++.+.+++.++..+|||++.+|
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~----~~~~~~~i~~i~~~~-~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGN----SVYQIAMVHYIKQKY-PHLQVIG-GNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCC----SHHHHHHHHHHHHHC-TTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEeeccCCc----chhHHHHHHHHHHhC-CCCceEe-cccchHHHHHHHHHcCCCEEEEC
Confidence 46788899999999999543332 022457788888776 3688876 77999999999999999999773
No 166
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.30 E-value=0.0006 Score=65.93 Aligned_cols=96 Identities=22% Similarity=0.290 Sum_probs=67.2
Q ss_pred CCcHHHHHHHHHhcCCcEEEEeec--CHHHHHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEec
Q 019244 185 SLSWKDVKWLQTITKLPILVKGVL--TAEDARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDG 261 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v~--~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~G 261 (344)
+...+.++++++. +.|++++... ..+.++.+.++|+|++.+.+....+...++ .++..+.++++.. ++||++ |
T Consensus 142 ~~~~~~i~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~-g 217 (393)
T 2qr6_A 142 ELLSERIAQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIA-G 217 (393)
T ss_dssp HHHHHHHHHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEE-E
T ss_pred HHHHHHHHHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEE-C
Confidence 3334567777775 8899988653 345577788999999988643210111111 1444567777766 799999 9
Q ss_pred CCCCHHHHHHHHHcCCCEEEEch
Q 019244 262 GVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 262 GIr~g~dv~kalalGAd~V~ig~ 284 (344)
|+.+.+|+.+++.+|||+|.+|+
T Consensus 218 gi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 218 GVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp CCCSHHHHHHHHTTTCSEEEESC
T ss_pred CcCCHHHHHHHHHcCCCEEEECC
Confidence 99999999999999999999976
No 167
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.30 E-value=0.00094 Score=58.31 Aligned_cols=74 Identities=19% Similarity=0.144 Sum_probs=50.4
Q ss_pred CHHH-HHHHHHcCCcEEEEcc-CCCCCCCCchhhH-HHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchH
Q 019244 209 TAED-ARIAVQAGAAGIIVSN-HGARQLDYVPATI-MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 285 (344)
Q Consensus 209 ~~~~-a~~~~~~G~d~I~v~~-~gG~~~~~g~~~~-~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~ 285 (344)
++++ ++.+.+.|+|.|.+.. ..+. ..|.... ..++++... ++|++++|||+ .+++.++++.|||.|.+||+
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~~~~~~--~~g~~~~~~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsa 188 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHAGLDEQ--AKPGFDLNGLLAAGEKA---RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGA 188 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEECCHHHH--TSTTCCTHHHHHHHHHH---TSCEEEESSCC-GGGHHHHHHTTCSEEEESHH
T ss_pred ChHHHHHHHHHhCCCEEEEEeccccc--ccCCCchHHHHHHhhCC---CCCEEEECCcC-HHHHHHHHHcCCCEEEEeee
Confidence 5655 6777788999995432 1100 0111111 444444332 68999999999 78899999999999999999
Q ss_pred HHH
Q 019244 286 VVY 288 (344)
Q Consensus 286 ~l~ 288 (344)
++.
T Consensus 189 I~~ 191 (207)
T 3ajx_A 189 IYG 191 (207)
T ss_dssp HHT
T ss_pred ccC
Confidence 875
No 168
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.29 E-value=0.0013 Score=61.01 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=67.6
Q ss_pred HHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 189 KDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 189 ~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
+.++++|+.. .+|+.| ++-|.++++.++++|+|.|-++|. +.+.+.++.+.+++++.+.+||||. .+
T Consensus 196 ~Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn~----------s~~~l~~av~~~~~~v~leaSGGIt-~~ 263 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDNM----------SISEIKKAVDIVNGKSVLEVSGCVN-IR 263 (300)
T ss_dssp HHHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-TT
T ss_pred HHHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHhhcCceEEEEECCCC-HH
Confidence 3477777765 356655 678999999999999999999873 2355666666666789999999995 77
Q ss_pred HHHHHHHcCCCEEEEchHH
Q 019244 268 DVFKALALGASGIFIGRPV 286 (344)
Q Consensus 268 dv~kalalGAd~V~ig~~~ 286 (344)
.+.++...|+|.+.+|...
T Consensus 264 ~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 264 NVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp THHHHHTTTCSEEECGGGT
T ss_pred HHHHHHHcCCCEEEeCccc
Confidence 8888888999999999654
No 169
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.28 E-value=0.00038 Score=64.45 Aligned_cols=87 Identities=24% Similarity=0.240 Sum_probs=66.4
Q ss_pred HHHHHHHHhcC--CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHcc---CCCcEEEecCC
Q 019244 189 KDVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGV 263 (344)
Q Consensus 189 ~~i~~i~~~~~--~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~---~~~~via~GGI 263 (344)
+.++..|+..+ .++.| .+.|.++++.+.++|+|.|.++|. .+ +.+.++.+.++ .++++.++|||
T Consensus 181 ~av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn~-------~~---e~l~~av~~l~~~~~~v~ieASGGI 249 (285)
T 1o4u_A 181 RAVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDNL-------SP---EEVKDISRRIKDINPNVIVEVSGGI 249 (285)
T ss_dssp HHHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC-------CH---HHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred HHHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECCC-------CH---HHHHHHHHHhhccCCCceEEEECCC
Confidence 35778887763 56666 678999999999999999999873 22 33444444432 27999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchHHH
Q 019244 264 RRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 264 r~g~dv~kalalGAd~V~ig~~~l 287 (344)
. .+.+.+....|+|.+.+|+...
T Consensus 250 t-~eni~~~a~tGVD~IsvGslt~ 272 (285)
T 1o4u_A 250 T-EENVSLYDFETVDVISSSRLTL 272 (285)
T ss_dssp C-TTTGGGGCCTTCCEEEEGGGTS
T ss_pred C-HHHHHHHHHcCCCEEEEeHHHc
Confidence 5 7888888889999999998543
No 170
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.25 E-value=0.00042 Score=60.38 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=66.6
Q ss_pred HHHHHHHHhcCCcEEEEee----cCHHH-HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCC
Q 019244 189 KDVKWLQTITKLPILVKGV----LTAED-ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 263 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v----~~~~~-a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGI 263 (344)
..++..++ .++..|-..- .+.+. .+.+.+..+|+|-+- .| +. ...+.++++.+ ++|||+.|+|
T Consensus 92 ~~i~~Ak~-~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiL--PG------i~-p~iI~~i~~~~--~~PiIaGGlI 159 (192)
T 3kts_A 92 NAIMKAKQ-HKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELL--PG------II-PEQVQKMTQKL--HIPVIAGGLI 159 (192)
T ss_dssp HHHHHHHH-TTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEE--CT------TC-HHHHHHHHHHH--CCCEEEESSC
T ss_pred HHHHHHHH-CCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEEC--Cc------hh-HHHHHHHHHhc--CCCEEEECCc
Confidence 45666665 4776666653 12233 456677789999773 12 22 26778888776 7999999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 264 RRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 264 r~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
++.+|+.+++..||++|..++..+|.
T Consensus 160 ~~~edv~~al~aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 160 ETSEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp CSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred CCHHHHHHHHHcCCeEEEeCCHHHhC
Confidence 99999999999999999999999984
No 171
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.25 E-value=0.003 Score=57.38 Aligned_cols=109 Identities=15% Similarity=0.170 Sum_probs=67.0
Q ss_pred HHHHHHhcCCcEEEEee--cCHHHHHHHHHcCCcEEEEccC-CCCCCCCch--hhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 191 VKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSNH-GARQLDYVP--ATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v--~~~~~a~~~~~~G~d~I~v~~~-gG~~~~~g~--~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
+....+..++.++.=.. .+.+.++...+.+-.+|.+-.. |=+...... ...+.+.++++.. ++||++.+||++
T Consensus 133 ~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst 210 (252)
T 3tha_A 133 LIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT--NLPIFVGFGIQN 210 (252)
T ss_dssp HHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC--CSCEEEESSCCS
T ss_pred HHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc--CCcEEEEcCcCC
Confidence 33344445654433222 3467788888887677655432 211111111 1234556665543 799999999999
Q ss_pred HHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHH
Q 019244 266 GTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVL 302 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l 302 (344)
++++.++.. +||+|.+|+.++..+...+.+...+.+
T Consensus 211 ~e~a~~~~~-~ADGVIVGSAiVk~i~~~~~~~~~~~~ 246 (252)
T 3tha_A 211 NQDVKRMRK-VADGVIVGTSIVKCFKQGNLDIIMKDI 246 (252)
T ss_dssp HHHHHHHTT-TSSEEEECHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHHh-cCCEEEECHHHHHHHHhcCHHHHHHHH
Confidence 999987655 799999999999876554444333333
No 172
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.21 E-value=0.0012 Score=57.81 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=55.2
Q ss_pred HHHHHHHHHcCCcEEEEccC--CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~--gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.+.++.+...|+..+.+.+. -|+ ..|.. .+.+.++.+.. ++|+|+.||+.+.+|+.+++..||+.|++|++++
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~--~~g~~-~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~ 207 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGT--KSGYD-TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFH 207 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTC--CSCCC-HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCc--ccccc-HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHH
Confidence 35567777888886665432 121 12222 66677766544 7999999999999999999999999999999987
Q ss_pred H
Q 019244 288 Y 288 (344)
Q Consensus 288 ~ 288 (344)
.
T Consensus 208 ~ 208 (237)
T 3cwo_X 208 F 208 (237)
T ss_dssp T
T ss_pred c
Confidence 5
No 173
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.21 E-value=0.0019 Score=57.10 Aligned_cols=107 Identities=10% Similarity=0.086 Sum_probs=67.2
Q ss_pred HHHHHHhcCCcEEEEee--cCHHHHHHHHHcCCcEEEEccC-----CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCC
Q 019244 191 VKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSNH-----GARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 263 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v--~~~~~a~~~~~~G~d~I~v~~~-----gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGI 263 (344)
++.+++ .+.++.++.. .+......+.+.|.+.+++.-. .| .+ | ..+.+..+++..+.++||+++|||
T Consensus 99 ~~~~~~-~g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~a~~~~~~G--~~-g--~~~~i~~lr~~~~~~~~i~v~GGI 172 (216)
T 1q6o_A 99 LDVAKE-FNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAG--VA-W--GEADITAIKRLSDMGFKVTVTGGL 172 (216)
T ss_dssp HHHHHH-TTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHHHHHTT--CC-C--CHHHHHHHHHHHHTTCEEEEESSC
T ss_pred HHHHHH-cCCCceeeeeeCCChhhHHHHHhcCcHHHHHHHHHHHHhcC--CC-C--CHHHHHHHHHhcCCCCcEEEECCc
Confidence 444544 4677655443 2355667777788877766210 11 11 1 244455555555447889999999
Q ss_pred CCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHH
Q 019244 264 RRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 310 (344)
Q Consensus 264 r~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~ 310 (344)
+ ...+.+++..|||.+.+||+++.+ .. ....++.++++++
T Consensus 173 ~-~~~~~~~~~aGad~ivvG~~I~~a---~d---p~~~~~~~~~~i~ 212 (216)
T 1q6o_A 173 A-LEDLPLFKGIPIHVFIAGRSIRDA---AS---PVEAARQFKRSIA 212 (216)
T ss_dssp C-GGGGGGGTTSCCSEEEESHHHHTS---SC---HHHHHHHHHHHHH
T ss_pred C-hhhHHHHHHcCCCEEEEeehhcCC---CC---HHHHHHHHHHHHH
Confidence 9 777889999999999999998752 12 2334455555554
No 174
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.19 E-value=0.0014 Score=60.98 Aligned_cols=85 Identities=25% Similarity=0.369 Sum_probs=65.5
Q ss_pred HHHHHHHhcC-CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHH
Q 019244 190 DVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 268 (344)
Q Consensus 190 ~i~~i~~~~~-~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~d 268 (344)
.++.+++..+ .|+.| ++-|.++++.+.++|+|.|.++|. +.+.+.++.+.+.++++|.+||||. ...
T Consensus 199 Av~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~ieaSGGI~-~~~ 266 (298)
T 3gnn_A 199 ALDAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEVSGGVN-FDT 266 (298)
T ss_dssp HHHHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEEESSCS-TTT
T ss_pred HHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCCC-HHH
Confidence 4777777653 45444 478999999999999999999873 2345666655555689999999995 778
Q ss_pred HHHHHHcCCCEEEEchHH
Q 019244 269 VFKALALGASGIFIGRPV 286 (344)
Q Consensus 269 v~kalalGAd~V~ig~~~ 286 (344)
+.+....|+|.+.+|+..
T Consensus 267 i~~~a~tGVD~isvG~lt 284 (298)
T 3gnn_A 267 VRAIAETGVDRISIGALT 284 (298)
T ss_dssp HHHHHHTTCSEEECGGGG
T ss_pred HHHHHHcCCCEEEECCee
Confidence 888888999999999843
No 175
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.17 E-value=0.001 Score=59.85 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=58.7
Q ss_pred CHHHHHHHHHcCC-----cEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 209 TAEDARIAVQAGA-----AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 209 ~~~~a~~~~~~G~-----d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
+++.++...+.|. .+|.+... |. ....+.+.++++... ++|+++-|||++.+++.+++. |||.|.+|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~~-G~-----~~~~~~i~~i~~~~~-~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEYS-GT-----YGNPELVAEVKKVLD-KARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECT-TS-----CCCHHHHHHHHHHCS-SSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeCC-CC-----cchHHHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 5677888777777 77777653 32 345678888887652 699999999999999999988 99999999
Q ss_pred hHHHHH
Q 019244 284 RPVVYS 289 (344)
Q Consensus 284 ~~~l~~ 289 (344)
+++...
T Consensus 219 Sa~v~~ 224 (234)
T 2f6u_A 219 NVIYEK 224 (234)
T ss_dssp HHHHHH
T ss_pred hHHHhC
Confidence 999763
No 176
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.14 E-value=0.00068 Score=60.45 Aligned_cols=97 Identities=15% Similarity=0.113 Sum_probs=62.5
Q ss_pred cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 208 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 208 ~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.+.+.++.+.+.|++.+++.-....+.++...+.+-+..+++..+.+++|.++|||+ ..++.++...|||.+.+||+++
T Consensus 122 ~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI~-~~~~~~~~~aGad~~VvG~~I~ 200 (221)
T 3exr_A 122 WTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGLS-VDTLKLFEGVDVFTFIAGRGIT 200 (221)
T ss_dssp CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSCC-GGGGGGGTTCCCSEEEECHHHH
T ss_pred CCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCCC-HHHHHHHHHCCCCEEEECchhh
Confidence 357778888888999887732111111222233444555555554468899999995 6778888899999999999876
Q ss_pred HHhhhcChHHHHHHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLREEFEL 311 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~~el~~ 311 (344)
.+ ..+ ...++.++++++.
T Consensus 201 ~a---~dp---~~a~~~~~~~~~~ 218 (221)
T 3exr_A 201 EA---KNP---AGAARAFKDEIKR 218 (221)
T ss_dssp TS---SSH---HHHHHHHHHHHHH
T ss_pred CC---CCH---HHHHHHHHHHHHH
Confidence 42 112 2345566666553
No 177
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.14 E-value=0.0034 Score=56.20 Aligned_cols=113 Identities=12% Similarity=0.139 Sum_probs=75.2
Q ss_pred HHHH---HHHHhcCCcEEEEee-cC-HHHHHHHHHcC-CcEEEEcc-CCCC-CCCCchhhHHHHHHHHHHccCCCcEEEe
Q 019244 189 KDVK---WLQTITKLPILVKGV-LT-AEDARIAVQAG-AAGIIVSN-HGAR-QLDYVPATIMALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 189 ~~i~---~i~~~~~~PvivK~v-~~-~~~a~~~~~~G-~d~I~v~~-~gG~-~~~~g~~~~~~l~~i~~~~~~~~~via~ 260 (344)
+.++ .+++. ++-+.+-.- .| .+.++.+.+.| +|.|.+-+ +.|. +..+.+..++-+.++++..+ +++|.++
T Consensus 102 ~~i~~~~~i~~~-G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~-~~~I~Vd 179 (227)
T 1tqx_A 102 RCIQLAKEIRDN-NLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK-NLNIQVD 179 (227)
T ss_dssp HHHHHHHHHHTT-TCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TCEEEEE
T ss_pred HHHHHHHHHHHc-CCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc-CCeEEEE
Confidence 3567 77664 554444332 23 35566777776 99996643 2221 23456777888888887764 7899999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHH
Q 019244 261 GGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 310 (344)
Q Consensus 261 GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~ 310 (344)
|||. .+.+.++..+|||.+.+||.++.+ .. ....++.|++.++
T Consensus 180 GGI~-~~ti~~~~~aGAd~~V~GsaIf~~---~d---~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 180 GGLN-IETTEISASHGANIIVAGTSIFNA---ED---PKYVIDTMRVSVQ 222 (227)
T ss_dssp SSCC-HHHHHHHHHHTCCEEEESHHHHTC---SS---HHHHHHHHHHHHH
T ss_pred CCCC-HHHHHHHHHcCCCEEEEeHHHhCC---CC---HHHHHHHHHHHHH
Confidence 9998 788999999999999999987642 12 3344555555443
No 178
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.06 E-value=0.0012 Score=58.71 Aligned_cols=86 Identities=21% Similarity=0.196 Sum_probs=60.7
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC-HHHHHHHHHcCCCEEEEchHHHHH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~-g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
.-++.+.++|+++++++.+ ..+.+..+++..+ + .++.++||+. +.+..+++..|||.+.+||+++.+
T Consensus 119 ~~a~~a~~~G~~GvV~sat----------~~~e~~~ir~~~~-~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a 186 (215)
T 3ve9_A 119 YLREVARRVNPKGFVAPAT----------RPSMISRVKGDFP-D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQS 186 (215)
T ss_dssp HHHHHHHHHCCSEEECCTT----------SHHHHHHHHHHCT-T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHHHHcCCCceeeCCC----------CHHHHHHHHHhCC-C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCC
Confidence 4577888999999988532 1345666776665 4 6889999994 336778889999999999999863
Q ss_pred hhhcChHHHHHHHHHHHHHHHHHHH
Q 019244 290 LAAEGEKGVRRVLEMLREEFELAMA 314 (344)
Q Consensus 290 ~~~~G~~~v~~~l~~l~~el~~~m~ 314 (344)
+.....++.++++++....
T Consensus 187 ------~dp~~a~~~i~~~i~~~~~ 205 (215)
T 3ve9_A 187 ------ADPVRKLEEIVRSQEEVLS 205 (215)
T ss_dssp ------SSHHHHHHHHHHHHHHHC-
T ss_pred ------CCHHHHHHHHHHHHHHHHH
Confidence 2223455667777766543
No 179
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.05 E-value=0.0014 Score=59.20 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=56.4
Q ss_pred CHHHHHHHHHcCC----cEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 209 TAEDARIAVQAGA----AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 209 ~~~~a~~~~~~G~----d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
+++.++...++|. -+|.+.. -|. ....+.+.++++.. .++|+++-|||++.+++.+++. |||.|.+|+
T Consensus 140 ~~~~~~~~a~~g~~~~~~~VYl~s-~G~-----~~~~~~i~~i~~~~-~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 140 NMDDIVAYARVSELLQLPIFYLEY-SGV-----LGDIEAVKKTKAVL-ETSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-TTS-----CCCHHHHHHHHHTC-SSSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred CHHHHHHHHHhCcccCCCEEEEeC-CCc-----cChHHHHHHHHHhc-CCCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 3677777777764 6777655 333 34567788887754 2689999999999999999888 999999999
Q ss_pred HHHH
Q 019244 285 PVVY 288 (344)
Q Consensus 285 ~~l~ 288 (344)
.+..
T Consensus 212 a~v~ 215 (240)
T 1viz_A 212 AVYE 215 (240)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9976
No 180
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.02 E-value=0.005 Score=61.96 Aligned_cols=81 Identities=16% Similarity=0.073 Sum_probs=59.0
Q ss_pred ecCHHHHHHHHHcC---CcEEEEccCCCCC--CCCc--hhhHHHHHHHHHHc----cCCCcEEEecCCCCHHHHHHHHH-
Q 019244 207 VLTAEDARIAVQAG---AAGIIVSNHGARQ--LDYV--PATIMALEEVVKAT----QGRIPVFLDGGVRRGTDVFKALA- 274 (344)
Q Consensus 207 v~~~~~a~~~~~~G---~d~I~v~~~gG~~--~~~g--~~~~~~l~~i~~~~----~~~~~via~GGIr~g~dv~kala- 274 (344)
+.++++++.+.+.| +|+|.++.-..+. .+.. +..++.+.++.+.+ ..++|+++.||| +.+++.+.++
T Consensus 115 ~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~ 193 (540)
T 3nl6_A 115 VGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQ 193 (540)
T ss_dssp ECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHh
Confidence 36899999999999 9999986421111 1111 12355566665543 137999999999 7899999998
Q ss_pred -------cCCCEEEEchHHHH
Q 019244 275 -------LGASGIFIGRPVVY 288 (344)
Q Consensus 275 -------lGAd~V~ig~~~l~ 288 (344)
.||+.|.+++.++.
T Consensus 194 ~~~~g~~~GadgvAVvsaI~~ 214 (540)
T 3nl6_A 194 CVSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp CBCTTSSCBCSCEEESHHHHT
T ss_pred hcccccccCceEEEEeHHHhc
Confidence 89999999999874
No 181
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.98 E-value=0.0024 Score=57.33 Aligned_cols=81 Identities=20% Similarity=0.237 Sum_probs=60.2
Q ss_pred cHHHHHHHHHhcC-CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 187 SWKDVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 187 ~~~~i~~i~~~~~-~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
..+.|+++++.++ +-+....+++.++++.+.++|+++|+..+ .+.+.+..+.+. .+|++. |+.|
T Consensus 72 a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~----------~~~~vi~~~~~~---gi~~ip--Gv~T 136 (232)
T 4e38_A 72 AVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG----------FNPNTVRACQEI---GIDIVP--GVNN 136 (232)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS----------CCHHHHHHHHHH---TCEEEC--EECS
T ss_pred HHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC----------CCHHHHHHHHHc---CCCEEc--CCCC
Confidence 3567899998874 33444556899999999999999996421 123344444332 577777 6889
Q ss_pred HHHHHHHHHcCCCEEEE
Q 019244 266 GTDVFKALALGASGIFI 282 (344)
Q Consensus 266 g~dv~kalalGAd~V~i 282 (344)
+.++.+|+.+|||.|.+
T Consensus 137 ptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 137 PSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999987
No 182
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=96.95 E-value=0.01 Score=59.13 Aligned_cols=70 Identities=19% Similarity=0.147 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
.+.++.+.+.|++.+.+....|. ....++.+..+++..++++|++ .|+|.+.+++.++..+|||++.+|.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~----~~~~~~~i~~lk~~~~~~~~Vi-~G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGF----SEWQKITIGWIREKYGDKVKVG-AGNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCC----SHHHHHHHHHHHHHHGGGSCEE-EEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhhhccceEEecccCc----ccchhhHHHHHHHhCCCCceEe-eccccCHHHHHHHHHhCCCeEEecc
Confidence 35577888999999998543332 1224455666665543127777 4889999999999999999998764
No 183
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.94 E-value=0.0025 Score=58.98 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=64.6
Q ss_pred HHHHHHHHhcC-CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHcc---CCCcEEEecCCC
Q 019244 189 KDVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVR 264 (344)
Q Consensus 189 ~~i~~i~~~~~-~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~---~~~~via~GGIr 264 (344)
+.++..++..+ .|+.| .+.+.++++.+.++|+|.|.+.|. .+ +.+.++.+.++ .+++|.++|||.
T Consensus 183 ~av~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn~-------~~---~~~~~~v~~l~~~~~~v~ieaSGGIt 251 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDNF-------AV---WQTQTAVQRRDSRAPTVMLESSGGLS 251 (284)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEETC-------CH---HHHHHHHHHHHHHCTTCEEEEESSCC
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC-------CH---HHHHHHHHHhhccCCCeEEEEECCCC
Confidence 35777777653 35665 778999999999999999999873 12 33333333332 379999999995
Q ss_pred CHHHHHHHHHcCCCEEEEchHH
Q 019244 265 RGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 265 ~g~dv~kalalGAd~V~ig~~~ 286 (344)
.+.+.+....|+|.+.+|+..
T Consensus 252 -~~~i~~~a~tGVD~isvG~l~ 272 (284)
T 1qpo_A 252 -LQTAATYAETGVDYLAVGALT 272 (284)
T ss_dssp -TTTHHHHHHTTCSEEECGGGT
T ss_pred -HHHHHHHHhcCCCEEEECHHH
Confidence 889999999999999999854
No 184
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.90 E-value=0.0078 Score=57.55 Aligned_cols=88 Identities=23% Similarity=0.279 Sum_probs=66.8
Q ss_pred HHHHHHHHhcCCcEEEEeec-CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 189 KDVKWLQTITKLPILVKGVL-TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~-~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
+.++++++...+|+.+-... +.+.++.+.++|+|.|++....|. .....+.+.++++.. ++||++ |.+.+.+
T Consensus 85 ~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~----~~~~~~~i~~i~~~~--~~~Viv-g~v~t~e 157 (361)
T 3khj_A 85 NEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEE 157 (361)
T ss_dssp HHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCS----BHHHHHHHHHHHHHC--CCEEEE-EEECSHH
T ss_pred HHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCC----cHHHHHHHHHHHHhc--CCcEEE-ccCCCHH
Confidence 45777777777898887653 378899999999999998543221 122345677777665 688887 6789999
Q ss_pred HHHHHHHcCCCEEEEc
Q 019244 268 DVFKALALGASGIFIG 283 (344)
Q Consensus 268 dv~kalalGAd~V~ig 283 (344)
++.++..+|||+|.+|
T Consensus 158 ~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 158 ATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHHHHcCcCEEEEe
Confidence 9999999999999985
No 185
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.88 E-value=0.003 Score=56.07 Aligned_cols=81 Identities=20% Similarity=0.225 Sum_probs=61.2
Q ss_pred cHHHHHHHHHhcCCc-EEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCC------cEEE
Q 019244 187 SWKDVKWLQTITKLP-ILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI------PVFL 259 (344)
Q Consensus 187 ~~~~i~~i~~~~~~P-vivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~------~via 259 (344)
..+.|+.+++.++-+ |....+++.++++.+.++|+++|+.-+ .+.+.+..+.+. ++ |++.
T Consensus 51 a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~----------~~~evi~~~~~~---~v~~~~~~~~~P 117 (217)
T 3lab_A 51 GLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG----------LTPELIEKAKQV---KLDGQWQGVFLP 117 (217)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS----------CCHHHHHHHHHH---HHHCSCCCEEEE
T ss_pred HHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC----------CcHHHHHHHHHc---CCCccCCCeEeC
Confidence 456799999988544 555557999999999999999996522 123444444332 35 7777
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEE
Q 019244 260 DGGVRRGTDVFKALALGASGIFI 282 (344)
Q Consensus 260 ~GGIr~g~dv~kalalGAd~V~i 282 (344)
|+.|++++.+|+.+|||.|-+
T Consensus 118 --G~~TptE~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 118 --GVATASEVMIAAQAGITQLKC 138 (217)
T ss_dssp --EECSHHHHHHHHHTTCCEEEE
T ss_pred --CCCCHHHHHHHHHcCCCEEEE
Confidence 889999999999999999975
No 186
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.82 E-value=0.0039 Score=55.57 Aligned_cols=87 Identities=14% Similarity=0.165 Sum_probs=61.3
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH-HHHHHHHHcCCCEEEEchHHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g-~dv~kalalGAd~V~ig~~~l~ 288 (344)
..-++.+.++|+|+++++.+ ..+.+..+++.++ + -++.+.||+-. .+..+++..|||.+.+|||++.
T Consensus 125 ~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~ 192 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYN 192 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcC
Confidence 45678889999999998532 1245666776665 4 58889999853 3567888899999999999986
Q ss_pred HhhhcChHHHHHHHHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLREEFELAMA 314 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~el~~~m~ 314 (344)
+ +......+.++++++....
T Consensus 193 A------~dP~~aa~~i~~~i~~~~~ 212 (222)
T 4dbe_A 193 A------GNPLTALRTINKIIEDKVM 212 (222)
T ss_dssp S------SSHHHHHHHHHHHHHHHHH
T ss_pred C------CCHHHHHHHHHHHHHHHHH
Confidence 3 2223445666666666543
No 187
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.81 E-value=0.0098 Score=54.60 Aligned_cols=89 Identities=16% Similarity=0.222 Sum_probs=64.9
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
+.+.++.+++.+++||+.|.. .++.++..+.++|+|+|.+...- .....+..+.+....+ .+.+++ .+.|
T Consensus 101 s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~-----l~~~~l~~l~~~a~~l--Gl~~lv--ev~t 171 (272)
T 3qja_A 101 SLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAA-----LEQSVLVSMLDRTESL--GMTALV--EVHT 171 (272)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGG-----SCHHHHHHHHHHHHHT--TCEEEE--EESS
T ss_pred CHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEeccc-----CCHHHHHHHHHHHHHC--CCcEEE--EcCC
Confidence 356899999999999999974 67778899999999999883210 1122333333333333 466665 3789
Q ss_pred HHHHHHHHHcCCCEEEEch
Q 019244 266 GTDVFKALALGASGIFIGR 284 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~ 284 (344)
.+++.+++.+|||.+++..
T Consensus 172 ~ee~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 172 EQEADRALKAGAKVIGVNA 190 (272)
T ss_dssp HHHHHHHHHHTCSEEEEES
T ss_pred HHHHHHHHHCCCCEEEECC
Confidence 9999999999999999984
No 188
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=96.79 E-value=0.017 Score=51.63 Aligned_cols=118 Identities=19% Similarity=0.215 Sum_probs=81.4
Q ss_pred cHHHHHHHHHhc--CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHH---ccCCCcEEEec
Q 019244 187 SWKDVKWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA---TQGRIPVFLDG 261 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~---~~~~~~via~G 261 (344)
+|+-++.++... ++++-+=.+.|.++|..+.++|+++|-. .-||-.+++.+....+.+++.. .+.+..+++.
T Consensus 99 T~eGl~Ai~~L~~eGI~vNvTliFS~~QA~laa~AGa~~iSp--FVgRidd~g~dG~~~v~~i~~~~~~~~~~t~iL~A- 175 (230)
T 1vpx_A 99 TPDGIKAVKTLSAEGIKTNVTLVFSPAQAILAAKAGATYVSP--FVGRMDDLSNDGMRMLGEIVEIYNNYGFETEIIAA- 175 (230)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHTCSCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHhCCCeEEEe--ccchhhhccccHHHHHHHHHHHHHHcCCCeEEEee-
Confidence 565444444332 8999888899999999999999998755 3345434444444444444433 3335667765
Q ss_pred CCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcC--hHHHHHHHHHHHH
Q 019244 262 GVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEMLRE 307 (344)
Q Consensus 262 GIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G--~~~v~~~l~~l~~ 307 (344)
++|++.++.++..+|+|.+-+.-.++..+..++ .+|++.+.+.|.+
T Consensus 176 S~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~gv~~F~~d~~~ 223 (230)
T 1vpx_A 176 SIRHPMHVVEAALMGVDIVTMPFAVLEKLFKHPMTDLGIERFMEDWKK 223 (230)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCCEEECCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 599999999999999999999888888776444 3456666655554
No 189
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.78 E-value=0.0039 Score=55.34 Aligned_cols=90 Identities=22% Similarity=0.300 Sum_probs=56.5
Q ss_pred CCcEEEEeecCHHHHHHHHHcCCcEEEEccCC--CCC---CCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHH
Q 019244 199 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG--ARQ---LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 273 (344)
Q Consensus 199 ~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g--G~~---~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kal 273 (344)
++.+++= +.+.++.+++.+.|.+.|.+-+.- |+. ....+..++...+..+....++||++.|||.++.++.++.
T Consensus 111 Gl~~iv~-v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~ 189 (219)
T 2h6r_A 111 GLETIVC-TNNINTSKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAAL 189 (219)
T ss_dssp TCEEEEE-ESSSHHHHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHH
T ss_pred CCeEEEE-eCCchHHHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHh
Confidence 6655543 334455677778898888775421 221 1111211222222222233479999999999999999999
Q ss_pred HcCCCEEEEchHHHHH
Q 019244 274 ALGASGIFIGRPVVYS 289 (344)
Q Consensus 274 alGAd~V~ig~~~l~~ 289 (344)
..|||+|.+|++++..
T Consensus 190 ~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 190 DLGAEGVLLASGVVKA 205 (219)
T ss_dssp TTTCCCEEESHHHHTC
T ss_pred hCCCCEEEEcHHHhCc
Confidence 9999999999999863
No 190
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=96.75 E-value=0.011 Score=52.72 Aligned_cols=38 Identities=29% Similarity=0.538 Sum_probs=34.7
Q ss_pred cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 252 QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 252 ~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
..++.|+.-|||.++.|+..+...|+|++.+|+.++.+
T Consensus 174 ~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a 211 (225)
T 1hg3_A 174 NPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKA 211 (225)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTC
T ss_pred cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCC
Confidence 35799999999999999999999999999999999864
No 191
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.70 E-value=0.01 Score=55.42 Aligned_cols=92 Identities=25% Similarity=0.150 Sum_probs=60.1
Q ss_pred HHHHHhcCCcEEEEee-----c----CH----H-HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHc-c-CCC
Q 019244 192 KWLQTITKLPILVKGV-----L----TA----E-DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-Q-GRI 255 (344)
Q Consensus 192 ~~i~~~~~~PvivK~v-----~----~~----~-~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~-~-~~~ 255 (344)
......+++|+++=.. . ++ . -++.+.+.|+|.+.+.-.. + +..+.+.+.++.+.. . ..+
T Consensus 148 ~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~----~-~~g~~~~~~~vv~~~~~~~~~ 222 (304)
T 1to3_A 148 NELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPL----Y-GKGARSDLLTASQRLNGHINM 222 (304)
T ss_dssp HHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGG----G-GCSCHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCc----C-CCCCHHHHHHHHHhccccCCC
Confidence 3333456899876543 1 11 2 3677889999999884310 0 001345555555541 1 278
Q ss_pred c-EEEecCCCCHHH----HHHHHHcCCCEEEEchHHHHH
Q 019244 256 P-VFLDGGVRRGTD----VFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 256 ~-via~GGIr~g~d----v~kalalGAd~V~ig~~~l~~ 289 (344)
| |+++||+ +..+ +..++..||+.|.+||.++..
T Consensus 223 P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 223 PWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp CEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred CeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 9 9999999 5533 777888999999999998764
No 192
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=96.64 E-value=0.012 Score=52.55 Aligned_cols=38 Identities=29% Similarity=0.524 Sum_probs=34.7
Q ss_pred cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 252 QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 252 ~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
..+++|+.-|||.+..|+..+...|+|++.+|+.++.+
T Consensus 171 ~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a 208 (226)
T 1w0m_A 171 FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKA 208 (226)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCC
Confidence 35789999999999999999999999999999999864
No 193
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.62 E-value=0.0028 Score=57.25 Aligned_cols=75 Identities=19% Similarity=0.276 Sum_probs=58.5
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.+.|+...+.|+|.+.+-.-.+. .+......+.+.++.+.. .+|+-..||||+-+|+.+.|.+||+-|.+++..+
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~ 108 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEV--SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI 108 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHC--CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT
T ss_pred HHHHHHHHHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhc--CCCeEeccccccHHHHHHHHHcCCCEEEEccccc
Confidence 36688889999999887431110 012245667888888776 7999999999999999999999999999999654
No 194
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.62 E-value=0.0094 Score=53.14 Aligned_cols=80 Identities=21% Similarity=0.245 Sum_probs=58.5
Q ss_pred HHHHHHHHHhcC-CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH
Q 019244 188 WKDVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 266 (344)
Q Consensus 188 ~~~i~~i~~~~~-~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g 266 (344)
.+.++++++.++ +-+....+++.++++.+.++|+|+|... + .+.+.+..+++ . ..+++. |+.|.
T Consensus 56 ~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p---~-------~d~~v~~~ar~-~--g~~~i~--Gv~t~ 120 (224)
T 1vhc_A 56 ADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTP---G-------LNPKIVKLCQD-L--NFPITP--GVNNP 120 (224)
T ss_dssp HHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECS---S-------CCHHHHHHHHH-T--TCCEEC--EECSH
T ss_pred HHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEEC---C-------CCHHHHHHHHH-h--CCCEEe--ccCCH
Confidence 456888888873 4455555678899999999999999542 1 12333444443 3 456655 49999
Q ss_pred HHHHHHHHcCCCEEEE
Q 019244 267 TDVFKALALGASGIFI 282 (344)
Q Consensus 267 ~dv~kalalGAd~V~i 282 (344)
.++.+++.+|||.|.+
T Consensus 121 ~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 121 MAIEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEE
Confidence 9999999999999998
No 195
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=96.59 E-value=0.0092 Score=51.85 Aligned_cols=79 Identities=27% Similarity=0.190 Sum_probs=57.1
Q ss_pred HHHHHHHhc--CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 190 DVKWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 190 ~i~~i~~~~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
.++.+|+.+ +.++.+..+.++++++.+.++|+|+| ++.. . ..+.+..+.+ . .+|++. |+.|+.
T Consensus 51 ~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~--~-------~~~~~~~~~~-~--g~~vi~--g~~t~~ 115 (205)
T 1wa3_A 51 VIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VSPH--L-------DEEISQFCKE-K--GVFYMP--GVMTPT 115 (205)
T ss_dssp HHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSS--C-------CHHHHHHHHH-H--TCEEEC--EECSHH
T ss_pred HHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-EcCC--C-------CHHHHHHHHH-c--CCcEEC--CcCCHH
Confidence 577777766 34555445679999999999999999 6421 1 1233333332 2 688887 788999
Q ss_pred HHHHHHHcCCCEEEEc
Q 019244 268 DVFKALALGASGIFIG 283 (344)
Q Consensus 268 dv~kalalGAd~V~ig 283 (344)
++.+++.+|||.|.+-
T Consensus 116 e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 116 ELVKAMKLGHTILKLF 131 (205)
T ss_dssp HHHHHHHTTCCEEEET
T ss_pred HHHHHHHcCCCEEEEc
Confidence 9999999999999764
No 196
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.58 E-value=0.0089 Score=52.91 Aligned_cols=79 Identities=15% Similarity=0.175 Sum_probs=57.3
Q ss_pred HHHHHHHHhcC-CcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 189 KDVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 189 ~~i~~i~~~~~-~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
+.++.+++.++ +-+....+.+.++++.+.++|+|+|+..+ .+.+.+. .++.. .++++. |+.|..
T Consensus 56 ~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~----------~d~~v~~-~~~~~--g~~~i~--G~~t~~ 120 (214)
T 1wbh_A 56 DAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG----------LTEPLLK-AATEG--TIPLIP--GISTVS 120 (214)
T ss_dssp HHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS----------CCHHHHH-HHHHS--SSCEEE--EESSHH
T ss_pred HHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC----------CCHHHHH-HHHHh--CCCEEE--ecCCHH
Confidence 46777888774 44455556788999999999999997521 1222222 33333 467776 499999
Q ss_pred HHHHHHHcCCCEEEE
Q 019244 268 DVFKALALGASGIFI 282 (344)
Q Consensus 268 dv~kalalGAd~V~i 282 (344)
++.+++.+|||.|.+
T Consensus 121 e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 121 ELMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 999999999999998
No 197
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=96.52 E-value=0.029 Score=49.78 Aligned_cols=117 Identities=13% Similarity=0.129 Sum_probs=80.2
Q ss_pred cHHHHHHHHHhc--CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHH---ccCCCcEEEec
Q 019244 187 SWKDVKWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA---TQGRIPVFLDG 261 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~---~~~~~~via~G 261 (344)
+|+-++.++... ++++-+=.+.|.+.|..+.++|++.|-. .-||-.++|.+....+.++++. .+.+..|++.
T Consensus 89 T~eGl~A~~~L~~~GI~vn~TliFS~~QA~~aa~AGa~~iSp--fvgRidd~g~~G~~~i~~~~~~y~~~~~~t~il~A- 165 (220)
T 1l6w_A 89 TAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGAEYVAP--YVNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAA- 165 (220)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEEECSHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHCCCeEEEe--ccchhhcccccHHHHHHHHHHHHHhcCCCeEEeec-
Confidence 565444444332 8999888899999999999999998765 3345444444444555444433 3335666665
Q ss_pred CCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcC--hHHHHHHHHHHH
Q 019244 262 GVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEMLR 306 (344)
Q Consensus 262 GIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G--~~~v~~~l~~l~ 306 (344)
++|+..++.++..+|+|.+-+.-.++..+..++ ..+++.+.+.+.
T Consensus 166 S~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~~v~~F~~D~~ 212 (220)
T 1l6w_A 166 SFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWQ 212 (220)
T ss_dssp CCSSHHHHHHHHHTTCSEEEECHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCCeEECCHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 699999999999999999999988888776443 234555554443
No 198
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.37 E-value=0.021 Score=51.05 Aligned_cols=87 Identities=16% Similarity=0.120 Sum_probs=60.9
Q ss_pred cHHHHHHHHHhcCCcEE--EEe-------e--cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhH-HHHHHHHHHccCC
Q 019244 187 SWKDVKWLQTITKLPIL--VKG-------V--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGR 254 (344)
Q Consensus 187 ~~~~i~~i~~~~~~Pvi--vK~-------v--~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~-~~l~~i~~~~~~~ 254 (344)
+.+.|+++|+.+++||+ .|. . .+.+++..+.++|+|.|.+...... .+..+ +.+..+.+ . .
T Consensus 57 ~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~-~--g 129 (229)
T 3q58_A 57 GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRL-H--G 129 (229)
T ss_dssp SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--T
T ss_pred CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHH-C--C
Confidence 46789999999999987 231 1 3457899999999999987643211 12222 33343332 2 4
Q ss_pred CcEEEecCCCCHHHHHHHHHcCCCEEEE
Q 019244 255 IPVFLDGGVRRGTDVFKALALGASGIFI 282 (344)
Q Consensus 255 ~~via~GGIr~g~dv~kalalGAd~V~i 282 (344)
+++++ .+.+.+++.++..+|||.|++
T Consensus 130 ~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 130 LLAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp CEEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred CEEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 55554 689999999999999999975
No 199
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.37 E-value=0.0081 Score=53.61 Aligned_cols=79 Identities=22% Similarity=0.256 Sum_probs=57.6
Q ss_pred HHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 189 KDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 189 ~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
+.++.+++.+ ++.+....+.+.++++.+.++|+|+|+.. + . +.+.+ +.++.. .++++. |+.|..
T Consensus 66 ~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p---~--~-----d~~v~-~~~~~~--g~~~i~--G~~t~~ 130 (225)
T 1mxs_A 66 KAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTP---G--I-----TEDIL-EAGVDS--EIPLLP--GISTPS 130 (225)
T ss_dssp HHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECS---S--C-----CHHHH-HHHHHC--SSCEEC--EECSHH
T ss_pred HHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeC---C--C-----CHHHH-HHHHHh--CCCEEE--eeCCHH
Confidence 4577788877 45555566688899999999999999642 1 1 22222 233333 467665 499999
Q ss_pred HHHHHHHcCCCEEEE
Q 019244 268 DVFKALALGASGIFI 282 (344)
Q Consensus 268 dv~kalalGAd~V~i 282 (344)
++.+++.+|||.|.+
T Consensus 131 e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 131 EIMMGYALGYRRFKL 145 (225)
T ss_dssp HHHHHHTTTCCEEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 999999999999998
No 200
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.37 E-value=0.022 Score=53.73 Aligned_cols=105 Identities=21% Similarity=0.247 Sum_probs=66.2
Q ss_pred HHHH--HHcCCcEEEEccCCCCC----C---CCc---hhhHHHHHHHHHHccCCCcEE-EecCCCCHHHHHH----HHHc
Q 019244 213 ARIA--VQAGAAGIIVSNHGARQ----L---DYV---PATIMALEEVVKATQGRIPVF-LDGGVRRGTDVFK----ALAL 275 (344)
Q Consensus 213 a~~~--~~~G~d~I~v~~~gG~~----~---~~g---~~~~~~l~~i~~~~~~~~~vi-a~GGIr~g~dv~k----alal 275 (344)
++.+ .+.|+|.+++--.|-.. + ... ....+.+.++.+.. .+|++ .+||+ +..+..+ |+..
T Consensus 194 ~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~--~~P~v~lsgG~-~~~~fl~~v~~A~~a 270 (332)
T 3iv3_A 194 MKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST--DLPYIYLSAGV-SAELFQETLVFAHKA 270 (332)
T ss_dssp HHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC--SSCEEEECTTC-CHHHHHHHHHHHHHH
T ss_pred HHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC--CCCEEEECCCC-CHHHHHHHHHHHHHc
Confidence 3455 47799999996332110 0 001 12234466665544 79965 79998 5666654 4457
Q ss_pred CC--CEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhCCCCHhhhccc
Q 019244 276 GA--SGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRD 327 (344)
Q Consensus 276 GA--d~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 327 (344)
|| ..|.+||.+.. .++..+.+.=.+..+.+|.-.|..+|++|+..
T Consensus 271 Ga~f~Gv~~GRnvwq-------~~v~~~~~~~~~~~~~~l~~~g~~~i~~l~~v 317 (332)
T 3iv3_A 271 GAKFNGVLCGRATWA-------GSVQVYMEEGKEAARQWLRTSGLQNINELNKV 317 (332)
T ss_dssp TCCCCEEEECHHHHT-------THHHHHHHHCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCcceEEeeHHHHH-------hhhhhhccccHHHHHHHHHHHhHHHHHHHHHH
Confidence 99 99999998865 23444444444567777888888888888754
No 201
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.36 E-value=0.011 Score=53.09 Aligned_cols=61 Identities=13% Similarity=0.177 Sum_probs=47.4
Q ss_pred CCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 220 GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 220 G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
|..+|.+-.. |. ....+.+.++++.. .++|++.-|||++++++.++.. |||+|.+|+.+..
T Consensus 159 g~~~vY~e~s-G~-----~g~~~~v~~ir~~~-~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 159 RLPVMYIEYS-GI-----YGDVSKVQAVSEHL-TETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp CCSEEEEECT-TS-----CCCHHHHHHHHTTC-SSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH
T ss_pred CCCEEEEecC-CC-----cCCHHHHHHHHHhc-CCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec
Confidence 7778877543 32 12467777777654 2689999999999999988776 9999999999976
No 202
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.35 E-value=0.021 Score=51.14 Aligned_cols=87 Identities=21% Similarity=0.241 Sum_probs=60.6
Q ss_pred cHHHHHHHHHhcCCcEEE--Ee-------e--cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhH-HHHHHHHHHccCC
Q 019244 187 SWKDVKWLQTITKLPILV--KG-------V--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGR 254 (344)
Q Consensus 187 ~~~~i~~i~~~~~~Pviv--K~-------v--~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~-~~l~~i~~~~~~~ 254 (344)
+.+.|+++|+.+++||+- |- . .+.+++..+.++|+|.|.+...... .+..+ +.+..+.+ . .
T Consensus 57 ~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~----~p~~l~~~i~~~~~-~--g 129 (232)
T 3igs_A 57 GIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQ----RPVAVEALLARIHH-H--H 129 (232)
T ss_dssp SHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--T
T ss_pred CHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccC----CHHHHHHHHHHHHH-C--C
Confidence 467899999999999862 31 1 3457899999999999988643211 12222 33333332 2 4
Q ss_pred CcEEEecCCCCHHHHHHHHHcCCCEEEE
Q 019244 255 IPVFLDGGVRRGTDVFKALALGASGIFI 282 (344)
Q Consensus 255 ~~via~GGIr~g~dv~kalalGAd~V~i 282 (344)
+++++ .+.+.+++.++..+|||.+++
T Consensus 130 ~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 130 LLTMA--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp CEEEE--ECCSHHHHHHHHHTTCSEEEC
T ss_pred CEEEE--eCCCHHHHHHHHhCCCCEEEE
Confidence 55554 689999999999999999975
No 203
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.29 E-value=0.0054 Score=61.99 Aligned_cols=76 Identities=22% Similarity=0.268 Sum_probs=56.7
Q ss_pred HHHHHHHHcCCcEEEEccCCCC-CCC-CchhhHHHHHHHHHHccCCCcEEEecCCCCHHH-----------HHHHHHcCC
Q 019244 211 EDARIAVQAGAAGIIVSNHGAR-QLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTD-----------VFKALALGA 277 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~-~~~-~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~d-----------v~kalalGA 277 (344)
+.|+...+.|+|.+.+.+-.+. ... ......+.+.++.+.+ .+||++.||||+.+| +.+++.+||
T Consensus 284 ~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGa 361 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGA 361 (555)
T ss_dssp HHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchhcccccchHHHHHHHHHHcCC
Confidence 5578888999999988753321 111 1223566777776554 799999999999855 999999999
Q ss_pred CEEEEchHHHH
Q 019244 278 SGIFIGRPVVY 288 (344)
Q Consensus 278 d~V~ig~~~l~ 288 (344)
|.|.+|+..+.
T Consensus 362 d~V~igt~~~~ 372 (555)
T 1jvn_A 362 DKVSIGTDAVY 372 (555)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECCHHhh
Confidence 99999998764
No 204
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=96.27 E-value=0.025 Score=50.37 Aligned_cols=116 Identities=22% Similarity=0.183 Sum_probs=76.5
Q ss_pred cHHHHHHHHHhc--CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHc---cCCCcEEEec
Q 019244 187 SWKDVKWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDG 261 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~---~~~~~via~G 261 (344)
+|+-++.++... ++++-+=.+.|.+++..+.++|++.|-. .-||-.++|.+....+.++++.. +.+..+++.
T Consensus 96 T~eGl~A~~~L~~~GI~vN~TliFS~~Qa~~aa~AGa~~iSp--FVgRidd~g~~G~~~v~~i~~~~~~~~~~t~vl~A- 172 (223)
T 1wx0_A 96 TEEGLKACKRLSAEGIKVNMTLIFSANQALLAARAGASYVSP--FLGRVDDISWDGGELLREIVEMIQVQDLPVKVIAA- 172 (223)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHTTCSCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHCCCeEEEe--ccchHhhcCCCHHHHHHHHHHHHHHcCCCeEEeec-
Confidence 566444444332 8999888899999999999999998755 34554445544455555554433 335556665
Q ss_pred CCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcCh--HHHHHHHHHH
Q 019244 262 GVRRGTDVFKALALGASGIFIGRPVVYSLAAEGE--KGVRRVLEML 305 (344)
Q Consensus 262 GIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~--~~v~~~l~~l 305 (344)
++|+..++.++..+|+|.+-+.-.++..+..++. .+++.+.+.|
T Consensus 173 S~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~~v~~F~~D~ 218 (223)
T 1wx0_A 173 SIRHPRHVTEAALLGADIATMPHAVFKQLLKHPLTDIGLKRFLEDW 218 (223)
T ss_dssp CCCSHHHHHHHHHTTCSEEEECHHHHHHHTCCHHHHHHC-------
T ss_pred ccCCHHHHHHHHHhCCCEEECCHHHHHHHHcCCChHHHHHHHHHHH
Confidence 6999999999999999999999888887754432 3444444433
No 205
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.25 E-value=0.029 Score=53.68 Aligned_cols=88 Identities=15% Similarity=0.185 Sum_probs=62.5
Q ss_pred HHHHHHHhcCCcEEEEee---cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH
Q 019244 190 DVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 266 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v---~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g 266 (344)
.++++++.-.+++.+-.. ...+.++.+.++|+|.|.+....|. ....++.+.++++.. .+++|++ |.+.+.
T Consensus 87 ~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~----~~~~~~~I~~ik~~~-p~v~Vi~-G~v~t~ 160 (366)
T 4fo4_A 87 QVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAY-PHLEIIG-GNVATA 160 (366)
T ss_dssp HHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHC-TTCEEEE-EEECSH
T ss_pred HHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCC----CHHHHHHHHHHHHhc-CCCceEe-eeeCCH
Confidence 466666643445544332 3468899999999999998654332 123445677777665 3677776 678999
Q ss_pred HHHHHHHHcCCCEEEEc
Q 019244 267 TDVFKALALGASGIFIG 283 (344)
Q Consensus 267 ~dv~kalalGAd~V~ig 283 (344)
+++.++..+|||+|.+|
T Consensus 161 e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 161 EGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 99999999999999994
No 206
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=96.25 E-value=0.027 Score=54.49 Aligned_cols=40 Identities=20% Similarity=0.129 Sum_probs=33.7
Q ss_pred HHHHccCCCcEEEecCCCCHHHHHHHHHc-CCCEEEEchHHHH
Q 019244 247 VVKATQGRIPVFLDGGVRRGTDVFKALAL-GASGIFIGRPVVY 288 (344)
Q Consensus 247 i~~~~~~~~~via~GGIr~g~dv~kalal-GAd~V~ig~~~l~ 288 (344)
+++.+ ++|||+.|||.+..++.+.+.. +||+|++||+++.
T Consensus 313 ir~~~--~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~ia 353 (400)
T 4gbu_A 313 VYSIW--KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFIS 353 (400)
T ss_dssp HHHHC--CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHH
T ss_pred HHHHh--CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHH
Confidence 44444 7899999999999998888865 5999999999985
No 207
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.21 E-value=0.031 Score=50.64 Aligned_cols=90 Identities=20% Similarity=0.237 Sum_probs=65.6
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
+.+++..+|+.+++||+-|.- .++.++..+..+|||+|.+...- + ...++..+.+..+.+ .+.++++ ++|
T Consensus 89 s~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~---l--~~~~l~~l~~~a~~l--Gl~~lvE--v~~ 159 (251)
T 1i4n_A 89 DPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARI---L--TAEQIKEIYEAAEEL--GMDSLVE--VHS 159 (251)
T ss_dssp CTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGG---S--CHHHHHHHHHHHHTT--TCEEEEE--ECS
T ss_pred CHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEeccc---C--CHHHHHHHHHHHHHc--CCeEEEE--eCC
Confidence 578999999999999999974 44456777999999999885431 1 123344443333333 5666665 789
Q ss_pred HHHHHHHHHc-CCCEEEEchH
Q 019244 266 GTDVFKALAL-GASGIFIGRP 285 (344)
Q Consensus 266 g~dv~kalal-GAd~V~ig~~ 285 (344)
.+++.+++.+ |++.|++-..
T Consensus 160 ~eE~~~A~~l~g~~iIGinnr 180 (251)
T 1i4n_A 160 REDLEKVFSVIRPKIIGINTR 180 (251)
T ss_dssp HHHHHHHHTTCCCSEEEEECB
T ss_pred HHHHHHHHhcCCCCEEEEeCc
Confidence 9999999999 9999998754
No 208
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.14 E-value=0.0048 Score=53.40 Aligned_cols=85 Identities=11% Similarity=0.075 Sum_probs=56.4
Q ss_pred HHHHHHHhcCCcEEEEeec----CHH-HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCC
Q 019244 190 DVKWLQTITKLPILVKGVL----TAE-DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 264 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~----~~~-~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr 264 (344)
.+...++ .++..+-..-+ +.+ .++.+.+..+|++-+- . |+-....+.++ -++|||+.|+|+
T Consensus 94 ~i~~Akk-~GL~tIqR~FliDs~al~~~~~~I~~~kPD~iEiL--P------g~v~p~~I~~v-----~~~PiIaGGlI~ 159 (188)
T 1vkf_A 94 NYVVAKK-NGIPAVLRFFALDSKAVERGIEQIETLGVDVVEVL--P------GAVAPKVARKI-----PGRTVIAAGLVE 159 (188)
T ss_dssp HHHHHHH-TTCCEEEEEECCSHHHHHHHHHHHHHHTCSEEEEE--S------GGGHHHHHTTS-----TTSEEEEESCCC
T ss_pred HHHHHHH-cCCEEeeEEEEEEeHHHhhhhhhccccCCCeEeec--C------CCchHHHHHHh-----cCCCEEEECCcC
Confidence 4555544 36555555421 222 3455566778887662 1 11122334433 378999999999
Q ss_pred CHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 265 RGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 265 ~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
+.+|+.+ +..||++|..++.-||.
T Consensus 160 t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 160 TEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp SHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred CHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 9999999 99999999999998884
No 209
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.07 E-value=0.33 Score=46.64 Aligned_cols=97 Identities=27% Similarity=0.330 Sum_probs=60.7
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHHH----HHHHHcCCcEEEEccCCCCCCCC-ch--hhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAEDA----RIAVQAGAAGIIVSNHGARQLDY-VP--ATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~a----~~~~~~G~d~I~v~~~gG~~~~~-g~--~~~~~l~~i~~~~~~~~~v 257 (344)
+++.++.+.+ +++||++|..+ +.++. +.+.+.|..-|++.-.|.+.... .. ..+.+++.+++.. .+||
T Consensus 238 n~~LL~~~a~-~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~--~lpV 314 (385)
T 3nvt_A 238 NFELLKAAGR-VDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKET--HLPV 314 (385)
T ss_dssp CHHHHHHHHT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCE
T ss_pred CHHHHHHHHc-cCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhc--CCCE
Confidence 3456777654 69999999864 66664 44556787666665434443322 11 2345566666655 6899
Q ss_pred EEe----cCCCCHH--HHHHHHHcCCCEEEEchHH
Q 019244 258 FLD----GGVRRGT--DVFKALALGASGIFIGRPV 286 (344)
Q Consensus 258 ia~----GGIr~g~--dv~kalalGAd~V~ig~~~ 286 (344)
+.| +|-|.-. =...|+++||++++|-..+
T Consensus 315 ~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~ 349 (385)
T 3nvt_A 315 MVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHP 349 (385)
T ss_dssp EEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred EEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecC
Confidence 887 3444332 2446889999999998744
No 210
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.98 E-value=0.057 Score=47.32 Aligned_cols=94 Identities=12% Similarity=0.078 Sum_probs=65.3
Q ss_pred HHHHHHHHHhcCCcEEE--E----e--e---cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCc
Q 019244 188 WKDVKWLQTITKLPILV--K----G--V---LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP 256 (344)
Q Consensus 188 ~~~i~~i~~~~~~Pviv--K----~--v---~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~ 256 (344)
.+.++.+++.+++|++. | + . .+.+.+..+.++|+|.|.+...-....+ ....+.+..+++.. +..+
T Consensus 45 ~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~--~~~~~~i~~~~~~~-~~~~ 121 (223)
T 1y0e_A 45 KEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPK--ETLDELVSYIRTHA-PNVE 121 (223)
T ss_dssp HHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCSS--SCHHHHHHHHHHHC-TTSE
T ss_pred HHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCcc--cCHHHHHHHHHHhC-CCce
Confidence 46799999999999852 1 1 1 3467889999999999988542110000 12345677777765 3566
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEEchHH
Q 019244 257 VFLDGGVRRGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 257 via~GGIr~g~dv~kalalGAd~V~ig~~~ 286 (344)
++. ++.+..++.++..+|+|.++++.+.
T Consensus 122 v~~--~~~t~~e~~~~~~~G~d~i~~~~~g 149 (223)
T 1y0e_A 122 IMA--DIATVEEAKNAARLGFDYIGTTLHG 149 (223)
T ss_dssp EEE--ECSSHHHHHHHHHTTCSEEECTTTT
T ss_pred EEe--cCCCHHHHHHHHHcCCCEEEeCCCc
Confidence 655 6789999999999999999876543
No 211
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.81 E-value=0.048 Score=52.01 Aligned_cols=68 Identities=19% Similarity=0.050 Sum_probs=52.3
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
.+.++.+.++|+|.|++....|. ....++.+..+++..+ ++||++ |++.|.+++.++..+|||+|.+|
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~----~~~~~e~I~~ir~~~~-~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAH----AKYVGKTLKSLRQLLG-SRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCS----SHHHHHHHHHHHHHHT-TCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cHhHHHHHHHHHHhcC-CCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 46688999999999999643232 1233566777776553 688887 67999999999999999999985
No 212
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.78 E-value=0.012 Score=53.55 Aligned_cols=68 Identities=16% Similarity=0.139 Sum_probs=54.8
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
.+.|+...+.|++.+.+-.-.+ ...+.+.++.+.+ .+||...|||++- |+.+.+ +||+-|.+|+..+.
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~--~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQES--PQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHS--TTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBC
T ss_pred HHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcC--CceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHh
Confidence 4668999999999888732111 3567778887766 6999999999986 999999 99999999998764
No 213
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=95.69 E-value=0.04 Score=48.29 Aligned_cols=78 Identities=28% Similarity=0.303 Sum_probs=56.7
Q ss_pred HHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHH
Q 019244 189 KDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 268 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~d 268 (344)
+.++.+++ -++.+....+++.++++.+.++|+|+++..+ . +...+..+++ . .++++. |+.|..+
T Consensus 53 ~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~-----~-----d~~v~~~~~~-~--g~~~i~--G~~t~~e 116 (207)
T 2yw3_A 53 EALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLVSPG-----L-----LEEVAALAQA-R--GVPYLP--GVLTPTE 116 (207)
T ss_dssp HHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEEESS-----C-----CHHHHHHHHH-H--TCCEEE--EECSHHH
T ss_pred HHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC-----C-----CHHHHHHHHH-h--CCCEEe--cCCCHHH
Confidence 45777777 5666666666788999999999999996531 1 2233333322 3 466665 4999999
Q ss_pred HHHHHHcCCCEEEE
Q 019244 269 VFKALALGASGIFI 282 (344)
Q Consensus 269 v~kalalGAd~V~i 282 (344)
+.++..+|||.|.+
T Consensus 117 ~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 117 VERALALGLSALKF 130 (207)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHCCCCEEEE
Confidence 99999999999988
No 214
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=95.61 E-value=0.1 Score=51.28 Aligned_cols=90 Identities=22% Similarity=0.235 Sum_probs=67.3
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
+.++++.+|+.+++||+-|.- .++.+...+..+|||+|-+.-.- ++ ..++..|.+....+ .+.+++. ++|
T Consensus 96 s~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~---l~--~~~l~~l~~~a~~l--gm~~LvE--vh~ 166 (452)
T 1pii_A 96 SFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSV---LD--DDQYRQLAAVAHSL--EMGVLTE--VSN 166 (452)
T ss_dssp CTTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTT---CC--HHHHHHHHHHHHHT--TCEEEEE--ECS
T ss_pred CHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEccc---CC--HHHHHHHHHHHHHc--CCeEEEE--eCC
Confidence 567899999999999999984 55666777999999999885431 11 23444444444434 5666665 899
Q ss_pred HHHHHHHHHcCCCEEEEchH
Q 019244 266 GTDVFKALALGASGIFIGRP 285 (344)
Q Consensus 266 g~dv~kalalGAd~V~ig~~ 285 (344)
.+++.+|+.+||+.+++-..
T Consensus 167 ~eE~~~A~~lga~iIGinnr 186 (452)
T 1pii_A 167 EEEQERAIALGAKVVGINNR 186 (452)
T ss_dssp HHHHHHHHHTTCSEEEEESE
T ss_pred HHHHHHHHHCCCCEEEEeCC
Confidence 99999999999999998754
No 215
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=95.57 E-value=0.018 Score=51.35 Aligned_cols=82 Identities=16% Similarity=0.120 Sum_probs=49.0
Q ss_pred HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH-HHHHHHHHcCCCEEEEchHHHHHh
Q 019244 212 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVYSL 290 (344)
Q Consensus 212 ~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g-~dv~kalalGAd~V~ig~~~l~~~ 290 (344)
-++.+.+.|+++++++.+ ..+.+.++++..+.+.++ .+.||+-. .+. +++..|||.+.+||+++.+
T Consensus 142 ~a~~a~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a- 208 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPST----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLA- 208 (228)
T ss_dssp HHHHHHHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTS-
T ss_pred HHHHHHHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCC-
Confidence 466788899999987531 234566677666544655 88898753 367 8899999999999997642
Q ss_pred hhcChHHHHHHHHHHHHHHHH
Q 019244 291 AAEGEKGVRRVLEMLREEFEL 311 (344)
Q Consensus 291 ~~~G~~~v~~~l~~l~~el~~ 311 (344)
.. ....++.++++++.
T Consensus 209 --~d---p~~a~~~~~~~~~~ 224 (228)
T 3m47_A 209 --DN---PAAAAAGAIESIKD 224 (228)
T ss_dssp --SC---HHHHHHHHHHHC--
T ss_pred --CC---HHHHHHHHHHHHHH
Confidence 11 23345556555543
No 216
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.56 E-value=0.072 Score=48.25 Aligned_cols=72 Identities=22% Similarity=0.251 Sum_probs=57.2
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.+.|+...++|+++|.|-.-.+. + ....+.|..+++.+ ++||+.-++|.+..++..++++|||+|.++...+
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~-f---~G~~~~l~~i~~~v--~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHR-F---GGSLLDLKRVREAV--DLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSS-S---CCCHHHHHHHHHHC--CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHHHHHHHcCCCEEEEecchhh-h---ccCHHHHHHHHHhc--CCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 46789999999999988432111 0 12456677777776 7999999999999999999999999999998765
No 217
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.47 E-value=0.069 Score=49.30 Aligned_cols=92 Identities=22% Similarity=0.359 Sum_probs=59.8
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+.-|=.+-.++++ +-.+|||++++-.|++
T Consensus 29 v~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 108 (292)
T 3daq_A 29 VNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYY 108 (292)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 34577899999999775442111111 123455556666667899999666566666664 3447999999999987
Q ss_pred HHhhhcChHHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~~ 307 (344)
+.. .++++.++++.+.+
T Consensus 109 ~~~---~~~~l~~~f~~ia~ 125 (292)
T 3daq_A 109 NKT---NQRGLVKHFEAIAD 125 (292)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 35666666555544
No 218
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.44 E-value=0.81 Score=42.46 Aligned_cols=89 Identities=12% Similarity=0.079 Sum_probs=59.7
Q ss_pred HHHHHHHhcCCcEEEEee-c---------CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 190 DVKWLQTITKLPILVKGV-L---------TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v-~---------~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.|+.+++. +.++.|-.. - ..+.++...++|||.|.+- ++++.+.+.++.+.+ ++|+++
T Consensus 149 rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e---------~~~~~~~~~~i~~~~--~~P~~~ 216 (305)
T 3ih1_A 149 KIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE---------ALQSEEEFRLFNSKV--NAPLLA 216 (305)
T ss_dssp HHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET---------TCCSHHHHHHHHHHS--CSCBEE
T ss_pred HHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc---------CCCCHHHHHHHHHHc--CCCEEE
Confidence 56666665 555444332 1 1245778899999999983 345677788888887 578875
Q ss_pred e---cCCCCHHHHHHHHHcCCCEEEEchHHHHHh
Q 019244 260 D---GGVRRGTDVFKALALGASGIFIGRPVVYSL 290 (344)
Q Consensus 260 ~---GGIr~g~dv~kalalGAd~V~ig~~~l~~~ 290 (344)
. +|-.....+.+.-.+|.+.|.++...+++.
T Consensus 217 n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~raa 250 (305)
T 3ih1_A 217 NMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRVA 250 (305)
T ss_dssp ECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHHH
T ss_pred eecCCCCCCCCCHHHHHHcCCCEEEEchHHHHHH
Confidence 3 443222345566679999999998877653
No 219
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.36 E-value=0.11 Score=48.17 Aligned_cols=91 Identities=13% Similarity=0.218 Sum_probs=58.5
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+++
T Consensus 44 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~ 123 (304)
T 3cpr_A 44 AYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYS 123 (304)
T ss_dssp HHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 4577899999999776553221111 123455556666667899998555555555553 33479999999999876
Q ss_pred HhhhcChHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~ 307 (344)
.. .++++.++++.+.+
T Consensus 124 ~~---~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 124 KP---SQEGLLAHFGAIAA 139 (304)
T ss_dssp CC---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH
Confidence 42 35666666655543
No 220
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=95.35 E-value=0.036 Score=50.69 Aligned_cols=85 Identities=16% Similarity=0.091 Sum_probs=61.7
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
+.+.|++|++.+++||+-|-- .+..+|+.+.++|+|.|+-+. +-+ ..+....+.+. ..++|+++ |++|
T Consensus 56 dp~~I~~I~~aVsIPVm~k~righ~~EAqilea~GaD~IDese-vlt-------pad~~~~I~k~-~f~vpfv~--~~~~ 124 (291)
T 3o07_A 56 DPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDESE-VLT-------PADWTHHIEKD-KFKVPFVC--GAKD 124 (291)
T ss_dssp CHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEEEEET-TSC-------CSCSSCCCCGG-GCSSCEEE--EESS
T ss_pred CHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHcCCCEEeccc-CCC-------HHHHHHHhhhh-cCCCcEEe--eCCC
Confidence 467899999999999999975 568899999999999997652 111 11111111111 11466665 6899
Q ss_pred HHHHHHHHHcCCCEEEE
Q 019244 266 GTDVFKALALGASGIFI 282 (344)
Q Consensus 266 g~dv~kalalGAd~V~i 282 (344)
-.+++.++..||+.+..
T Consensus 125 l~EAlrri~eGA~mIrT 141 (291)
T 3o07_A 125 LGEALRRINEGAAMIRT 141 (291)
T ss_dssp HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEe
Confidence 99999999999999875
No 221
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=95.35 E-value=0.02 Score=51.46 Aligned_cols=79 Identities=9% Similarity=-0.109 Sum_probs=53.9
Q ss_pred CHHHHHHHHHcCCcEEEE-ccCCCC-CCCCchhhHHHHHHHHHHccC---CCcEEEecCCCCHHHHHHHHH--cCCCEEE
Q 019244 209 TAEDARIAVQAGAAGIIV-SNHGAR-QLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALA--LGASGIF 281 (344)
Q Consensus 209 ~~~~a~~~~~~G~d~I~v-~~~gG~-~~~~g~~~~~~l~~i~~~~~~---~~~via~GGIr~g~dv~kala--lGAd~V~ 281 (344)
|+.+.......++|.|.+ +-+.|. +..+.+..++-+.++++.... +++|.++|||. .+.+.++.. .|||.+.
T Consensus 137 Tp~~~l~~~l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~V 215 (237)
T 3cu2_A 137 TPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLV 215 (237)
T ss_dssp SCGGGGTTTTTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEE
T ss_pred ChHHHHHHHhhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEE
Confidence 444443333458998866 222221 112345556667777766532 58999999998 788999999 9999999
Q ss_pred EchHHHH
Q 019244 282 IGRPVVY 288 (344)
Q Consensus 282 ig~~~l~ 288 (344)
+||.++.
T Consensus 216 vGSaIf~ 222 (237)
T 3cu2_A 216 SGSALFS 222 (237)
T ss_dssp ECGGGGS
T ss_pred EeeHHhC
Confidence 9999874
No 222
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.34 E-value=0.083 Score=48.02 Aligned_cols=42 Identities=21% Similarity=0.479 Sum_probs=37.0
Q ss_pred cHHHHHHHHHhcCCcEEEEe-ecCHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.++.++++++..++||++.+ +.+++++..+.++|+|+|.|.+
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 47789999998899999985 5689999999999999999964
No 223
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=95.33 E-value=0.38 Score=43.70 Aligned_cols=97 Identities=22% Similarity=0.352 Sum_probs=61.2
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHHHHH----HHHcCCcEEEEccCCCCCC-CC--chhhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAEDARI----AVQAGAAGIIVSNHGARQL-DY--VPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~a~~----~~~~G~d~I~v~~~gG~~~-~~--g~~~~~~l~~i~~~~~~~~~v 257 (344)
+...++++.+ +++||++|..+ +.+++.. +...|..-+.+--.|++.. .. -...+.+++.+++.. .+||
T Consensus 119 n~~ll~~~a~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~--~~pV 195 (262)
T 1zco_A 119 NFELLKEVGK-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELS--HLPI 195 (262)
T ss_dssp CHHHHHHHTT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCE
T ss_pred CHHHHHHHHh-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhh--CCCE
Confidence 3456777777 69999999874 6777544 4467876666654454432 11 112344666666554 5899
Q ss_pred EEecCCCCHH-----H-HHHHHHcCCCEEEEchHH
Q 019244 258 FLDGGVRRGT-----D-VFKALALGASGIFIGRPV 286 (344)
Q Consensus 258 ia~GGIr~g~-----d-v~kalalGAd~V~ig~~~ 286 (344)
+++..=.+|. . +..+.++||++++|-+.+
T Consensus 196 i~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 196 IVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp EECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred EEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 8865433333 4 334778999999999875
No 224
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.32 E-value=0.09 Score=48.49 Aligned_cols=91 Identities=15% Similarity=0.310 Sum_probs=58.8
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+...+++|||+--|=.+-.++++ +-.+|||++++-.|+++
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (291)
T 3tak_A 29 EWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYN 108 (291)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 4577899999999776443111111 123455556666667899999656556666654 44589999999999876
Q ss_pred HhhhcChHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~ 307 (344)
.. .++++.++++.+.+
T Consensus 109 ~~---~~~~l~~~f~~ia~ 124 (291)
T 3tak_A 109 KP---TQEGLYQHYKAIAE 124 (291)
T ss_dssp CC---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH
Confidence 42 35666555555443
No 225
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.26 E-value=0.1 Score=48.41 Aligned_cols=90 Identities=14% Similarity=0.301 Sum_probs=56.9
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ |-.+|||++++-.|+++
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 119 (301)
T 1xky_A 40 NYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYN 119 (301)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 3567899999999775443111111 123455556666667899998555555555553 33479999999999876
Q ss_pred HhhhcChHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLR 306 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~ 306 (344)
.. .++++.++++.+.
T Consensus 120 ~~---s~~~l~~~f~~va 134 (301)
T 1xky_A 120 KP---SQEGMYQHFKAIA 134 (301)
T ss_dssp CC---CHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHH
Confidence 42 4556555555443
No 226
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.19 E-value=0.085 Score=49.30 Aligned_cols=91 Identities=14% Similarity=0.245 Sum_probs=58.8
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+++
T Consensus 50 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~ 129 (315)
T 3si9_A 50 EWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYN 129 (315)
T ss_dssp HHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 3577899999999775443111111 123455566666667899999656556666654 44589999999999876
Q ss_pred HhhhcChHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~ 307 (344)
.. .++++.++++.+.+
T Consensus 130 ~~---~~~~l~~~f~~va~ 145 (315)
T 3si9_A 130 RP---NQRGLYTHFSSIAK 145 (315)
T ss_dssp CC---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH
Confidence 42 35565555555443
No 227
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.18 E-value=0.12 Score=47.90 Aligned_cols=91 Identities=19% Similarity=0.280 Sum_probs=58.2
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+++
T Consensus 35 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 114 (297)
T 3flu_A 35 DWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYN 114 (297)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 3467899999999776543211111 123455556666667899999555555666553 33589999999999876
Q ss_pred HhhhcChHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~ 307 (344)
.. .++++.++++.+.+
T Consensus 115 ~~---~~~~l~~~f~~va~ 130 (297)
T 3flu_A 115 KP---SQEGIYQHFKTIAE 130 (297)
T ss_dssp CC---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH
Confidence 42 35566555555443
No 228
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.17 E-value=0.039 Score=51.34 Aligned_cols=63 Identities=21% Similarity=0.243 Sum_probs=45.8
Q ss_pred HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH----------HHHHHHHcCCCEEE
Q 019244 212 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGIF 281 (344)
Q Consensus 212 ~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~----------dv~kalalGAd~V~ 281 (344)
.|+.+.++|+++++++.+ - +..+++.++ .-.++.++|||-.. .+.+++..|||.+.
T Consensus 163 lA~~a~~~G~dGvV~s~~----------E---~~~IR~~~~-~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iV 228 (303)
T 3ru6_A 163 FSKISYENGLDGMVCSVF----------E---SKKIKEHTS-SNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIV 228 (303)
T ss_dssp HHHHHHHTTCSEEECCTT----------T---HHHHHHHSC-TTSEEEECCCCTTC--------CCSHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEECHH----------H---HHHHHHhCC-CccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEE
Confidence 466778899999987432 1 345566654 33488899999432 36677889999999
Q ss_pred EchHHHH
Q 019244 282 IGRPVVY 288 (344)
Q Consensus 282 ig~~~l~ 288 (344)
+||+++.
T Consensus 229 vGr~I~~ 235 (303)
T 3ru6_A 229 VGRPIYK 235 (303)
T ss_dssp ECHHHHT
T ss_pred EChHHhC
Confidence 9999875
No 229
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.16 E-value=0.11 Score=48.22 Aligned_cols=93 Identities=15% Similarity=0.190 Sum_probs=60.1
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+++
T Consensus 39 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 118 (303)
T 2wkj_A 39 QFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYY 118 (303)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCC
Confidence 3567899999999775443111111 123455556666667899998555445555543 33479999999999886
Q ss_pred HhhhcChHHHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLREEF 309 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~el 309 (344)
.. .++++.++++.+.+..
T Consensus 119 ~~---s~~~l~~~f~~va~a~ 136 (303)
T 2wkj_A 119 PF---SFEEHCDHYRAIIDSA 136 (303)
T ss_dssp CC---CHHHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHHhC
Confidence 42 4677777777665543
No 230
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.14 E-value=0.11 Score=47.99 Aligned_cols=92 Identities=12% Similarity=0.172 Sum_probs=59.1
Q ss_pred HHHHH-cCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 214 RIAVQ-AGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 214 ~~~~~-~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
+.+++ .|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 31 ~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 110 (293)
T 1f6k_A 31 RHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFY 110 (293)
T ss_dssp HHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45778 99999999775442111111 123455556666667899998655555566553 3347999999999988
Q ss_pred HHhhhcChHHHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLREE 308 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~~e 308 (344)
+.. .++++.++++.+.+.
T Consensus 111 ~~~---~~~~l~~~f~~va~a 128 (293)
T 1f6k_A 111 YKF---SFPEIKHYYDTIIAE 128 (293)
T ss_dssp SCC---CHHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHHh
Confidence 642 356666666655443
No 231
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.14 E-value=0.083 Score=45.94 Aligned_cols=79 Identities=19% Similarity=0.214 Sum_probs=56.2
Q ss_pred HHHHHHHHhcCCcEEEEe--ecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH
Q 019244 189 KDVKWLQTITKLPILVKG--VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 266 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~--v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g 266 (344)
+.++++++.+++|++++. +.+.+.+..+.++|+|+|.+.. .....+. .++.. ..+++.. +.|.
T Consensus 47 ~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~----------~~~~~~~-~~~~~--g~~~~~g--~~t~ 111 (212)
T 2v82_A 47 QSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN----------IHSEVIR-RAVGY--GMTVCPG--CATA 111 (212)
T ss_dssp HHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS----------CCHHHHH-HHHHT--TCEEECE--ECSH
T ss_pred HHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC----------CCHHHHH-HHHHc--CCCEEee--cCCH
Confidence 467777777788888743 4678899999999999996421 1122332 23333 3555543 8999
Q ss_pred HHHHHHHHcCCCEEEE
Q 019244 267 TDVFKALALGASGIFI 282 (344)
Q Consensus 267 ~dv~kalalGAd~V~i 282 (344)
.++.++..+|+|.|.+
T Consensus 112 ~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 112 TEAFTALEAGAQALKI 127 (212)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHCCCCEEEE
Confidence 9999999999999987
No 232
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.14 E-value=0.14 Score=46.88 Aligned_cols=71 Identities=21% Similarity=0.184 Sum_probs=56.7
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
+.|+...+.||++|.|-.-.+. ++ ...+.|..+++.+ ++||+.-..|.+..++..+.++|||+|.+....+
T Consensus 83 ~~A~~y~~~GA~~IsVltd~~~---f~-Gs~~~L~~ir~~v--~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 83 ALAKAYEEGGAACLSVLTDTPS---FQ-GAPEFLTAARQAC--SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCSTT---TC-CCHHHHHHHHHTS--SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHHHHHHHCCCCEEEEeccccc---cC-CCHHHHHHHHHhc--CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 6688899999999988542211 11 2456777787776 7999999999999999999999999999998765
No 233
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=95.13 E-value=0.058 Score=49.05 Aligned_cols=79 Identities=24% Similarity=0.449 Sum_probs=52.4
Q ss_pred HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHH----------HHHHHHcCCCEEE
Q 019244 212 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGIF 281 (344)
Q Consensus 212 ~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~d----------v~kalalGAd~V~ 281 (344)
-|+.+.++|+|+++++. .-+..+++.++ .--++.+.|||-..+ +.+++..|||.+.
T Consensus 149 ~A~~a~~~G~dGvV~s~-------------~e~~~ir~~~~-~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iV 214 (259)
T 3tfx_A 149 LAKMAKHSGADGVICSP-------------LEVKKLHENIG-DDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIV 214 (259)
T ss_dssp HHHHHHHTTCCEEECCG-------------GGHHHHHHHHC-SSSEEEECCCCCC-----------CHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCCEEEECH-------------HHHHHHHhhcC-CccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEE
Confidence 36667889999998752 12344455554 334788999996432 7788999999999
Q ss_pred EchHHHHHhhhcChHHHHHHHHHHHHHHH
Q 019244 282 IGRPVVYSLAAEGEKGVRRVLEMLREEFE 310 (344)
Q Consensus 282 ig~~~l~~~~~~G~~~v~~~l~~l~~el~ 310 (344)
+||+++.+ +.....++.++++++
T Consensus 215 vGr~I~~a------~dp~~a~~~i~~~~~ 237 (259)
T 3tfx_A 215 VGRPITLA------SDPKAAYEAIKKEFN 237 (259)
T ss_dssp ECHHHHTS------SSHHHHHHHHHHHHT
T ss_pred EChHHhCC------CCHHHHHHHHHHHHH
Confidence 99998753 122245566666654
No 234
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.11 E-value=0.088 Score=48.92 Aligned_cols=89 Identities=20% Similarity=0.306 Sum_probs=57.5
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+.-|=.+-.++++ +-.+|||++++-.|+++
T Consensus 43 ~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 122 (304)
T 3l21_A 43 NHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYS 122 (304)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 3477899999999776543111111 123455666666677999999666556666654 33479999999999876
Q ss_pred HhhhcChHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEML 305 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l 305 (344)
.. .++++.++++.+
T Consensus 123 ~~---s~~~l~~~f~~v 136 (304)
T 3l21_A 123 KP---PQRGLQAHFTAV 136 (304)
T ss_dssp CC---CHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHH
Confidence 42 345555555444
No 235
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.05 E-value=0.15 Score=44.93 Aligned_cols=89 Identities=18% Similarity=0.142 Sum_probs=62.1
Q ss_pred HHHHHHHHHhcCCcEEE--E-e-------e-cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCc
Q 019244 188 WKDVKWLQTITKLPILV--K-G-------V-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP 256 (344)
Q Consensus 188 ~~~i~~i~~~~~~Pviv--K-~-------v-~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~ 256 (344)
.+.++.+++.+++|++- | . + .+.+.++.+.++|+|.|.+...--...+ +....+.+..+++..+ .++
T Consensus 58 ~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~-~~~~~~~i~~i~~~~~-~~~ 135 (234)
T 1yxy_A 58 VRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHD-GLDIASFIRQVKEKYP-NQL 135 (234)
T ss_dssp HHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTT-CCCHHHHHHHHHHHCT-TCE
T ss_pred HHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCC-CccHHHHHHHHHHhCC-CCe
Confidence 46799999999999842 1 1 1 2467899999999999988643110000 1123466777776653 455
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEE
Q 019244 257 VFLDGGVRRGTDVFKALALGASGI 280 (344)
Q Consensus 257 via~GGIr~g~dv~kalalGAd~V 280 (344)
++. ++++..++.++..+|||.|
T Consensus 136 v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 136 LMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp EEE--ECSSHHHHHHHHHTTCSEE
T ss_pred EEE--eCCCHHHHHHHHHcCCCEE
Confidence 554 6889999999999999999
No 236
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=95.04 E-value=0.78 Score=43.63 Aligned_cols=89 Identities=19% Similarity=0.105 Sum_probs=66.4
Q ss_pred HHHHHHHHHhc-CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEe
Q 019244 188 WKDVKWLQTIT-KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 188 ~~~i~~i~~~~-~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~ 260 (344)
.+.++.+|+.+ ++|+.+..- .+.+++ +.+.+.|+++|.-- ..+..++.+.++++.+ ++||+++
T Consensus 178 ~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEqP--------~~~~~~~~~~~l~~~~--~iPI~~d 247 (384)
T 2pgw_A 178 LEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIEQP--------TVSWSIPAMAHVREKV--GIPIVAD 247 (384)
T ss_dssp HHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHHHC--SSCEEES
T ss_pred HHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEeCC--------CChhhHHHHHHHHhhC--CCCEEEe
Confidence 45688888877 577777642 455553 55667899988521 1234677788888776 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEEchHH
Q 019244 261 GGVRRGTDVFKALALG-ASGIFIGRPV 286 (344)
Q Consensus 261 GGIr~g~dv~kalalG-Ad~V~ig~~~ 286 (344)
+.+.+..|+.+++..| +|.|++....
T Consensus 248 e~i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 248 QAAFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp TTCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCcCCHHHHHHHHHcCCCCEEEEcchh
Confidence 9999999999999987 8999997543
No 237
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.02 E-value=0.089 Score=49.17 Aligned_cols=91 Identities=14% Similarity=0.134 Sum_probs=58.4
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.|+++ +-.+|||++++-.|+++
T Consensus 52 ~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 131 (315)
T 3na8_A 52 ERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYW 131 (315)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 4577899999999775442111111 123455556666667899999656556666554 44589999999999887
Q ss_pred HhhhcChHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~ 307 (344)
.. .++++.++++.+.+
T Consensus 132 ~~---s~~~l~~~f~~va~ 147 (315)
T 3na8_A 132 KL---NEAEVFQHYRAVGE 147 (315)
T ss_dssp CC---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH
Confidence 42 34565555555433
No 238
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.01 E-value=0.1 Score=48.20 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=59.3
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+.-|=.+-.++++ +-.+|||++++-.|+++
T Consensus 31 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 110 (294)
T 3b4u_A 31 RRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYF 110 (294)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCC
Confidence 4577899999999776443111111 123455555666667899998555545555543 33479999999999886
Q ss_pred H-hhhcChHHHHHHHHHHHHH
Q 019244 289 S-LAAEGEKGVRRVLEMLREE 308 (344)
Q Consensus 289 ~-~~~~G~~~v~~~l~~l~~e 308 (344)
. . .++++.++++.+.+.
T Consensus 111 ~~~---s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 111 KNV---SDDGLFAWFSAVFSK 128 (294)
T ss_dssp CSC---CHHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHHh
Confidence 4 2 456776666666554
No 239
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.00 E-value=0.13 Score=47.42 Aligned_cols=92 Identities=18% Similarity=0.325 Sum_probs=58.3
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45678899999999776443111111 123455556666667899998555545555543 3347999999999987
Q ss_pred HHhhhcChHHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~~ 307 (344)
+.. .++++.++++.+.+
T Consensus 107 ~~~---s~~~l~~~f~~ia~ 123 (289)
T 2yxg_A 107 NKP---TQEGLRKHFGKVAE 123 (289)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45666666555443
No 240
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=95.00 E-value=1.8 Score=38.30 Aligned_cols=96 Identities=17% Similarity=0.233 Sum_probs=58.5
Q ss_pred CcHHHHHHHHHhc-CCcEEEEee------cCH-HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 186 LSWKDVKWLQTIT-KLPILVKGV------LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 186 ~~~~~i~~i~~~~-~~PvivK~v------~~~-~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
++.+.++++.+.. ++|+.+--. .++ +..+++.+.|++.|-.|| |..-......++.|.++.+...+++.|
T Consensus 104 iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG--~~~~~~a~~g~~~L~~Lv~~a~~ri~I 181 (224)
T 2bdq_A 104 IDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHG--SSNGEPIIENIKHIKALVEYANNRIEI 181 (224)
T ss_dssp BCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECS--CSSCCCGGGGHHHHHHHHHHHTTSSEE
T ss_pred cCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCC--CCCCCcHHHHHHHHHHHHHhhCCCeEE
Confidence 3444555555443 456554332 223 336789999999998754 321111233445566665555568999
Q ss_pred EEecCCCCHHHHHHHH-HcCCCEEEEch
Q 019244 258 FLDGGVRRGTDVFKAL-ALGASGIFIGR 284 (344)
Q Consensus 258 ia~GGIr~g~dv~kal-alGAd~V~ig~ 284 (344)
++-|||+ ...+.+.+ .+|++.+=.+.
T Consensus 182 m~GgGV~-~~Ni~~l~~~tGv~e~H~s~ 208 (224)
T 2bdq_A 182 MVGGGVT-AENYQYICQETGVKQAHGTR 208 (224)
T ss_dssp EECSSCC-TTTHHHHHHHHTCCEEEETT
T ss_pred EeCCCCC-HHHHHHHHHhhCCCEEcccc
Confidence 9999998 46666666 58998887543
No 241
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=94.98 E-value=0.11 Score=48.47 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=56.9
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+...+++|||+.-|=.+-.++++ |-.+|||++++-.|+++
T Consensus 36 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~ 115 (309)
T 3fkr_A 36 DFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHG 115 (309)
T ss_dssp HHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBT
T ss_pred HHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCc
Confidence 3467899999999765442111111 123455556666667899998655555555553 33479999999999762
Q ss_pred HhhhcChHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~ 307 (344)
....-.++++.++++.+.+
T Consensus 116 ~~~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 116 ATFRVPEAQIFEFYARVSD 134 (309)
T ss_dssp TTBCCCHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHH
Confidence 1111245665555555443
No 242
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.98 E-value=0.11 Score=49.07 Aligned_cols=91 Identities=19% Similarity=0.312 Sum_probs=57.6
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+++|.+.|+-|-...-.. .-.+.+..+++.+.+++|||+--|=.+-.++++ |-.+|||++++-.|++
T Consensus 58 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 137 (343)
T 2v9d_A 58 IDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYY 137 (343)
T ss_dssp HHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSS
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 34577899999999775443111111 123455556666667899998655555555553 3347999999999987
Q ss_pred HHhhhcChHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLR 306 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~ 306 (344)
+.. .++++.++++.+.
T Consensus 138 ~~~---s~~~l~~~f~~VA 153 (343)
T 2v9d_A 138 WKV---SEANLIRYFEQVA 153 (343)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 642 3455555555443
No 243
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=94.96 E-value=0.073 Score=48.29 Aligned_cols=79 Identities=22% Similarity=0.344 Sum_probs=52.7
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH-HH---------HHHHHHcCCCEE
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TD---------VFKALALGASGI 280 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g-~d---------v~kalalGAd~V 280 (344)
+-++.+.++|+++++++. .-+..+++.++.+. ++.+.|||-. .+ ..+++..|||.+
T Consensus 166 ~~A~~a~~aG~~GvV~sa-------------~e~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~i 231 (255)
T 3ldv_A 166 RLATLTKNAGLDGVVCSA-------------QEASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYL 231 (255)
T ss_dssp HHHHHHHHTTCSEEECCH-------------HHHHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEECH-------------HHHHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEE
Confidence 345667789999998742 23455566665444 7788999853 23 567889999999
Q ss_pred EEchHHHHHhhhcChHHHHHHHHHHHHHH
Q 019244 281 FIGRPVVYSLAAEGEKGVRRVLEMLREEF 309 (344)
Q Consensus 281 ~ig~~~l~~~~~~G~~~v~~~l~~l~~el 309 (344)
.+||+++.+ .. ....++.+++|+
T Consensus 232 VvGr~I~~a---~d---p~~a~~~i~~ei 254 (255)
T 3ldv_A 232 VIGRPITQA---AH---PEVVLEEINSSL 254 (255)
T ss_dssp EECHHHHTC---SC---HHHHHHHHHHHC
T ss_pred EECHHHhCC---CC---HHHHHHHHHHhh
Confidence 999998753 12 233455666554
No 244
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=94.95 E-value=0.11 Score=48.40 Aligned_cols=91 Identities=20% Similarity=0.309 Sum_probs=58.3
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+...+++|||+--|=.+-.++++ +-.+|||++++..|+++
T Consensus 51 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (314)
T 3qze_A 51 DFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYN 130 (314)
T ss_dssp HHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 3467899999999765442111111 123455555666667899999656556666654 33589999999999886
Q ss_pred HhhhcChHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~ 307 (344)
.. .++++.++++.+.+
T Consensus 131 ~~---s~~~l~~~f~~va~ 146 (314)
T 3qze_A 131 KP---TQEGMYQHFRHIAE 146 (314)
T ss_dssp CC---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH
Confidence 42 35566555555443
No 245
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=94.94 E-value=0.13 Score=47.57 Aligned_cols=92 Identities=20% Similarity=0.273 Sum_probs=58.1
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ |-.+|||++++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (294)
T 2ehh_A 27 IEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYY 106 (294)
T ss_dssp HHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45577899999999776443111111 123455556666667899998555555555553 3347999999999987
Q ss_pred HHhhhcChHHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~~ 307 (344)
+.. .++++.++++.+.+
T Consensus 107 ~~~---s~~~l~~~f~~va~ 123 (294)
T 2ehh_A 107 NKP---TQRGLYEHFKTVAQ 123 (294)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45565555555433
No 246
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=94.93 E-value=0.12 Score=48.55 Aligned_cols=92 Identities=13% Similarity=0.095 Sum_probs=57.9
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+|+|.+.|+-|-...-.. .-.+.+..+++.+.+++|||+--|=.+-.++++ |-.+|||++++-.|++
T Consensus 61 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 140 (332)
T 2r8w_A 61 IARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSY 140 (332)
T ss_dssp HHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 34577899999999776443111111 123455556666667899998544444555543 3347999999999987
Q ss_pred HHhhhcChHHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~~ 307 (344)
+.. .++++.++++.+.+
T Consensus 141 ~~~---s~~~l~~~f~~VA~ 157 (332)
T 2r8w_A 141 TPL---TQEEAYHHFAAVAG 157 (332)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45666666655543
No 247
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.89 E-value=2.2 Score=40.23 Aligned_cols=126 Identities=15% Similarity=0.164 Sum_probs=70.2
Q ss_pred cHHHHHHHHHhcCCcEEEEeec-CHHHH----HHHHHcCCcEEEEccCCCCCCCCch--hhHHHHHHHHHHccCCCcEEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL-TAEDA----RIAVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~-~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~--~~~~~l~~i~~~~~~~~~via 259 (344)
++..|+++.+ +++||++|..+ |.++. ..+.+.|.+.+.+ |+-+....-+ -.+.+++.+++..+ .+||..
T Consensus 137 n~~LL~~va~-~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLl--hc~s~Yp~~~~~~nL~ai~~lk~~f~-~lpVg~ 212 (349)
T 2wqp_A 137 NYPLIKLVAS-FGKPIILSTGMNSIESIKKSVEIIREAGVPYALL--HCTNIYPTPYEDVRLGGMNDLSEAFP-DAIIGL 212 (349)
T ss_dssp CHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEE--ECCCCSSCCGGGCCTHHHHHHHHHCT-TSEEEE
T ss_pred CHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEE--eccCCCCCChhhcCHHHHHHHHHHCC-CCCEEe
Confidence 5677888876 59999999864 56553 4455678866655 3333222211 13455666655541 488876
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHH----HHHHHHHHHHHHHHHHHHhCC
Q 019244 260 DGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKG----VRRVLEMLREEFELAMALSGC 318 (344)
Q Consensus 260 ~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~----v~~~l~~l~~el~~~m~~~G~ 318 (344)
++==.-..=...|+++||+ +|=+.|--.-+..|.++ --+-++.|.++++..-..+|.
T Consensus 213 sdHt~G~~~~~AAvAlGA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~ 273 (349)
T 2wqp_A 213 SDHTLDNYACLGAVALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGG 273 (349)
T ss_dssp ECCSSSSHHHHHHHHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCcHHHHHHHHHhCCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCC
Confidence 5411113334467899999 44443311101112211 012356777788888888885
No 248
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=94.86 E-value=0.22 Score=46.77 Aligned_cols=88 Identities=15% Similarity=0.066 Sum_probs=60.4
Q ss_pred HHHHHHHHhcCCcEEEEeecCH---HHHHHHHHcC--CcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCC
Q 019244 189 KDVKWLQTITKLPILVKGVLTA---EDARIAVQAG--AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 263 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~~~---~~a~~~~~~G--~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGI 263 (344)
+.++++++. +.|+.+.....+ +.++.+.++| +++|.+....| .....++.+.++++.. +.+++..|.|
T Consensus 85 ~~i~~~~~~-g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G----~~~~~~~~i~~lr~~~--~~~~vi~G~v 157 (336)
T 1ypf_A 85 SFIRDMQSR-GLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHG----HSNAVINMIQHIKKHL--PESFVIAGNV 157 (336)
T ss_dssp HHHHHHHHT-TCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSC----CSHHHHHHHHHHHHHC--TTSEEEEEEE
T ss_pred HHHHHHHhc-CCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCC----CcHHHHHHHHHHHHhC--CCCEEEECCc
Confidence 346665543 667777643333 4467788999 99988743212 1234567788888776 2344455779
Q ss_pred CCHHHHHHHHHcCCCEEEEc
Q 019244 264 RRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 264 r~g~dv~kalalGAd~V~ig 283 (344)
.+.+++.++..+|||+|.++
T Consensus 158 ~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 158 GTPEAVRELENAGADATKVG 177 (336)
T ss_dssp CSHHHHHHHHHHTCSEEEEC
T ss_pred CCHHHHHHHHHcCCCEEEEe
Confidence 99999999999999999993
No 249
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=94.85 E-value=0.087 Score=52.28 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=54.3
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
.+.++.+.++|+|.|.+....|. .....+.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~----~~~~~~~v~~i~~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGH----SKGVIERVRWVKQTFP-DVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCS----BHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhcccceEEecccCCc----chhHHHHHHHHHHHCC-CceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 57789999999999999654332 2445677888877663 688887 77999999999999999999985
No 250
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=94.82 E-value=0.12 Score=47.82 Aligned_cols=92 Identities=16% Similarity=0.289 Sum_probs=58.5
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ |-.+|||++++-.|++
T Consensus 27 v~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (297)
T 2rfg_A 27 VDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYY 106 (297)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 45678899999999765442111111 123455555666667899988555545555543 3347999999999988
Q ss_pred HHhhhcChHHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~~ 307 (344)
+.. .++++.++++.+.+
T Consensus 107 ~~~---s~~~l~~~f~~va~ 123 (297)
T 2rfg_A 107 NRP---SQEGLYQHFKMVHD 123 (297)
T ss_dssp TCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45666666655544
No 251
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=94.82 E-value=0.12 Score=47.55 Aligned_cols=89 Identities=15% Similarity=0.237 Sum_probs=56.7
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHH----HcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL----ALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kal----alGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++.. .+|||++++-.|+++
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (292)
T 2ojp_A 29 DYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYN 108 (292)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 4577889999999776443211111 12345555666666789999855555566665433 379999999999876
Q ss_pred HhhhcChHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEML 305 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l 305 (344)
.. .++++.++++.+
T Consensus 109 ~~---s~~~l~~~f~~i 122 (292)
T 2ojp_A 109 RP---SQEGLYQHFKAI 122 (292)
T ss_dssp CC---CHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHH
Confidence 42 345555555444
No 252
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=94.81 E-value=0.081 Score=48.42 Aligned_cols=40 Identities=28% Similarity=0.288 Sum_probs=34.9
Q ss_pred HHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEc
Q 019244 188 WKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~ 227 (344)
.+.++++|+.+++|+++..- .++++++.+...|+|+++|.
T Consensus 197 ~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 197 HALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp HHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 35689999988999999764 68999999999999999995
No 253
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=94.77 E-value=0.11 Score=48.15 Aligned_cols=90 Identities=19% Similarity=0.345 Sum_probs=56.7
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ |-.+|||++++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 118 (306)
T 1o5k_A 39 VRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYY 118 (306)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 34577899999999775443111111 123455556666667899998555555555553 3347999999999987
Q ss_pred HHhhhcChHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEML 305 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l 305 (344)
+.. .++++.++++.+
T Consensus 119 ~~~---s~~~l~~~f~~v 133 (306)
T 1o5k_A 119 NKP---TQEGLYQHYKYI 133 (306)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 642 345555555444
No 254
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=94.75 E-value=0.067 Score=48.07 Aligned_cols=80 Identities=25% Similarity=0.390 Sum_probs=49.8
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHH----------HHHHHHcCCCEE
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGI 280 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~d----------v~kalalGAd~V 280 (344)
+.|+.+.++|++++++|.+ -...+++..+.+. ++.+.|||-..+ ..+++..|||.+
T Consensus 148 ~~A~~a~~~g~~GvV~s~~-------------e~~~ir~~~~~~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~l 213 (239)
T 3tr2_A 148 RMATLAKSAGLDGVVCSAQ-------------EAALLRKQFDRNF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYL 213 (239)
T ss_dssp HHHHHHHHHTCCEEECCHH-------------HHHHHHTTCCTTS-EEEECCBC----------CCBCHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEECch-------------hHHHHHHhcCCCc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEE
Confidence 3466777889999987521 1233454454334 788999985432 557889999999
Q ss_pred EEchHHHHHhhhcChHHHHHHHHHHHHHHH
Q 019244 281 FIGRPVVYSLAAEGEKGVRRVLEMLREEFE 310 (344)
Q Consensus 281 ~ig~~~l~~~~~~G~~~v~~~l~~l~~el~ 310 (344)
.+||+++.+ .. ....++.+++|+.
T Consensus 214 VvGr~I~~a---~d---p~~a~~~i~~~i~ 237 (239)
T 3tr2_A 214 VIGRPITQS---TD---PLKALEAIDKDIK 237 (239)
T ss_dssp EECHHHHTS---SS---HHHHHHHHHHHC-
T ss_pred EEChHHhCC---CC---HHHHHHHHHHHHh
Confidence 999998753 12 2234555655543
No 255
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=94.72 E-value=0.16 Score=47.04 Aligned_cols=92 Identities=14% Similarity=0.250 Sum_probs=59.1
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccC-CCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPV 286 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~-~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~ 286 (344)
++.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+ ++|||+.-|=.+-.++++ +-.+|||++++-.|+
T Consensus 34 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 113 (301)
T 3m5v_A 34 IKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPY 113 (301)
T ss_dssp HHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 34577899999999776443111111 123456666666777 899999656556666654 334899999999998
Q ss_pred HHHhhhcChHHHHHHHHHHHH
Q 019244 287 VYSLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 287 l~~~~~~G~~~v~~~l~~l~~ 307 (344)
++.. .++++.++++.+.+
T Consensus 114 y~~~---s~~~l~~~f~~va~ 131 (301)
T 3m5v_A 114 YNKP---TQQGLYEHYKAIAQ 131 (301)
T ss_dssp SSCC---CHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHH
Confidence 7642 34555555554433
No 256
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=94.66 E-value=0.11 Score=47.98 Aligned_cols=92 Identities=17% Similarity=0.342 Sum_probs=57.4
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ |-.+|||++++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (292)
T 2vc6_A 27 VEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYY 106 (292)
T ss_dssp HHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45678899999998765442111111 123455555666667899987555444555543 3447999999999987
Q ss_pred HHhhhcChHHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~~ 307 (344)
+.. .++++.++++.+.+
T Consensus 107 ~~~---s~~~l~~~f~~ia~ 123 (292)
T 2vc6_A 107 NKP---TQEGIYQHFKAIDA 123 (292)
T ss_dssp SCC---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHH
Confidence 642 45565555555443
No 257
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.65 E-value=0.17 Score=47.37 Aligned_cols=92 Identities=14% Similarity=0.242 Sum_probs=55.3
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++|
T Consensus 39 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 39 AYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 3467889999999775442111111 123455556666677999998555555666553 33479999999999776
Q ss_pred HhhhcChHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLR 306 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~ 306 (344)
.- -..++++.++++.+.
T Consensus 119 ~k-p~~~~~l~~~f~~ia 135 (318)
T 3qfe_A 119 GK-ATTPPVIKSFFDDVS 135 (318)
T ss_dssp ---CCCHHHHHHHHHHHH
T ss_pred CC-CCCHHHHHHHHHHHH
Confidence 30 012455555555443
No 258
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.64 E-value=0.1 Score=51.98 Aligned_cols=231 Identities=16% Similarity=0.193 Sum_probs=112.2
Q ss_pred hcccccceeecccC-CCCCCCcceeec-ccccccceeecccccccccCChhhHHHHHHHHHcCCcc-ccC--CHHHHHHH
Q 019244 41 NAFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIM-VYK--DRNVVAQL 115 (344)
Q Consensus 41 ~~f~~i~l~pr~l~-~~~~vd~st~l~-g~~l~~Pi~iapm~~~~~~~~~~~~~lA~aA~~~g~~~-~~~--d~~~~~~~ 115 (344)
-.||++.|+|..-. ..++|||+|.|- +.+|+.||+.|||.- -.|..||.+.++.|... +++ +.+...+.
T Consensus 60 LTfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDT------VTe~~MAIamAr~GGiGvIH~n~sie~Qa~~ 133 (556)
T 4af0_A 60 LTYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDT------VTEDRMAIALALHGGLGIIHHNCSAEEQAAM 133 (556)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTT------TCSHHHHHHHHHTTCEEEECCSSCHHHHHHH
T ss_pred CChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCccc------ccCHHHHHHHHHCCCeEEEcCCCCHHHHHHH
Confidence 36999999997542 335899999985 689999999999952 24567999888888766 444 45555677
Q ss_pred HHHHHHcC--Cc--EEEeccCCccccccHHHHHhhc-CCCCccc----ccccccccccccc-cccchhhHHHHhhcC---
Q 019244 116 VRRAERAG--FK--AIALTVDTPRLGRREADIKNRF-TLPPFLT----LKNFQGLDLGKMD-EANDSGLAAYVAGQI--- 182 (344)
Q Consensus 116 i~~a~~ag--~~--~l~~tvd~~~~g~r~~~~~~~~-~~~~g~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 182 (344)
+++++++. +- .+.++++..+....+-..+.++ ++|.-.. -+.++-+....+. ......+.+++.++.
T Consensus 134 V~~VKr~e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT~~lvt~ 213 (556)
T 4af0_A 134 VRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTTEVVTG 213 (556)
T ss_dssp HHHHHHCCC-----------------------------------------------------------------------
T ss_pred HHHHHhcccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhcccceEEe
Confidence 88888753 22 2344444333211111011111 1111000 0000000000000 000001111111000
Q ss_pred CCCC------------------------------cHHHHHHHHHhc---------CCcEEEEeecC---HHHHHHHHHcC
Q 019244 183 DRSL------------------------------SWKDVKWLQTIT---------KLPILVKGVLT---AEDARIAVQAG 220 (344)
Q Consensus 183 ~~~~------------------------------~~~~i~~i~~~~---------~~PvivK~v~~---~~~a~~~~~~G 220 (344)
.... +.+++.+.++.- .+.|..-...+ .+-+..+.++|
T Consensus 214 ~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~VgAAVgv~~d~~eR~~aLv~AG 293 (556)
T 4af0_A 214 SSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDRLKLLAEAG 293 (556)
T ss_dssp --------------------------------------------CTTCCBCTTTCCBCCEEEECSSHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCcchhcchhhceeeEEEeccCccHHHHHHHHHhcC
Confidence 0000 111222111100 01111111122 34578899999
Q ss_pred CcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 221 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 221 ~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
+|.|+++..-|+ ....++.+..+++.. .+++||+ |.|-|.+-+...+..|||+|-+|
T Consensus 294 vD~iviD~ahGh----s~~v~~~i~~ik~~~-p~~~via-GNVaT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 294 LDVVVLDSSQGN----SVYQIEFIKWIKQTY-PKIDVIA-GNVVTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp CCEEEECCSCCC----SHHHHHHHHHHHHHC-TTSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred CcEEEEeccccc----cHHHHHHHHHHHhhC-CcceEEe-ccccCHHHHHHHHHcCCCEEeec
Confidence 999999874342 234567777777765 3788776 88999999888889999999776
No 259
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.63 E-value=0.11 Score=51.72 Aligned_cols=69 Identities=16% Similarity=0.283 Sum_probs=55.4
Q ss_pred CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 209 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 209 ~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
+.+.++.+.++|+|.|.+....|+ .....+.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~----~~~~~~~i~~ir~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAYP-HLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHCT-TCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHhccCceEEecccccc----chHHHHHHHHHHHHCC-CceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 468899999999999999754331 2345677888887763 688888 77999999999999999999986
No 260
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=94.62 E-value=0.033 Score=48.39 Aligned_cols=43 Identities=21% Similarity=0.369 Sum_probs=38.5
Q ss_pred cHHHHHHHHHhcCCcEEEEe-ecCHHHHHHHHHcCCcEEEEccC
Q 019244 187 SWKDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSNH 229 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~~ 229 (344)
.-+.|+++++.+++|+|+.| +.+.|+++.+.++||++|..|+.
T Consensus 138 ~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 138 IPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp CHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred hHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 34689999999999999988 47899999999999999999873
No 261
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=94.57 E-value=0.084 Score=48.22 Aligned_cols=40 Identities=30% Similarity=0.278 Sum_probs=35.3
Q ss_pred HHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEc
Q 019244 188 WKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~ 227 (344)
.+.++++|+.+++|+++... .++++++.+..+|+|+++|.
T Consensus 195 ~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 195 ENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp HHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 46799999988999999875 57999999999999999995
No 262
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.57 E-value=0.099 Score=48.80 Aligned_cols=90 Identities=18% Similarity=0.209 Sum_probs=57.4
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+++.+.+++|||+--|= +-.++++ |-.+|||++++-.|+++
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~~P~y~ 118 (314)
T 3d0c_A 40 EFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIHQPVHP 118 (314)
T ss_dssp HHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEECCCCCS
T ss_pred HHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 3477899999998765442111111 1234555566666678999974443 5566553 33479999999999886
Q ss_pred HhhhcChHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~ 307 (344)
.. .++++.++++.+.+
T Consensus 119 ~~---s~~~l~~~f~~va~ 134 (314)
T 3d0c_A 119 YI---TDAGAVEYYRNIIE 134 (314)
T ss_dssp CC---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH
Confidence 42 45666666666544
No 263
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.55 E-value=0.17 Score=47.07 Aligned_cols=92 Identities=10% Similarity=0.084 Sum_probs=57.9
Q ss_pred HHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHH----HHHHcCCCEEEEchHHHHH
Q 019244 215 IAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVF----KALALGASGIFIGRPVVYS 289 (344)
Q Consensus 215 ~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~----kalalGAd~V~ig~~~l~~ 289 (344)
.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.+++ .+-.+|||++++-.|+++.
T Consensus 43 ~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 122 (307)
T 3s5o_A 43 KLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYR 122 (307)
T ss_dssp HHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTG
T ss_pred HHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 456789999999775442111111 12345556666666789999855555566555 3345899999999998863
Q ss_pred hhhcChHHHHHHHHHHHH
Q 019244 290 LAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 290 ~~~~G~~~v~~~l~~l~~ 307 (344)
. .-.++++.++++.+.+
T Consensus 123 ~-~~s~~~l~~~f~~ia~ 139 (307)
T 3s5o_A 123 G-RMSSAALIHHYTKVAD 139 (307)
T ss_dssp G-GCCHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHHHh
Confidence 1 1145666666655543
No 264
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.51 E-value=0.087 Score=50.92 Aligned_cols=67 Identities=27% Similarity=0.383 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
.+.++.+.++|+|.|++..+.|. .....+.+.++++.. .+||++ |++.+.+++.++..+|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~----~~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS----BHHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 57899999999999998543331 112345666665544 678887 78999999999999999999995
No 265
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=94.49 E-value=0.091 Score=49.08 Aligned_cols=91 Identities=19% Similarity=0.174 Sum_probs=59.9
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+.-|- +-.++++ +-.+|||++++..|+++
T Consensus 40 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P~y~ 118 (316)
T 3e96_A 40 DRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMPIHP 118 (316)
T ss_dssp HHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCCCCS
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 3467899999998765442111111 1234555666666678999997664 7777664 34579999999999875
Q ss_pred HhhhcChHHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLREE 308 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~e 308 (344)
. -.++++.++++.+.+.
T Consensus 119 ~---~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 119 Y---VTAGGVYAYFRDIIEA 135 (316)
T ss_dssp C---CCHHHHHHHHHHHHHH
T ss_pred C---CCHHHHHHHHHHHHHh
Confidence 3 2466777776666554
No 266
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.41 E-value=0.19 Score=46.81 Aligned_cols=90 Identities=14% Similarity=0.246 Sum_probs=57.9
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCC-CEEEEchHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGA-SGIFIGRPV 286 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGA-d~V~ig~~~ 286 (344)
++.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+...+++|||+.-|=.+-.++++ +-.+|| |++++..|+
T Consensus 34 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~ 113 (311)
T 3h5d_A 34 IEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPY 113 (311)
T ss_dssp HHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCC
Confidence 34577899999999876543111111 123456666666677899999666556666664 334697 999999998
Q ss_pred HHHhhhcChHHHHHHHHHH
Q 019244 287 VYSLAAEGEKGVRRVLEML 305 (344)
Q Consensus 287 l~~~~~~G~~~v~~~l~~l 305 (344)
++.. .++++.++++.+
T Consensus 114 y~~~---s~~~l~~~f~~v 129 (311)
T 3h5d_A 114 YNKP---SQEGMYQHFKAI 129 (311)
T ss_dssp SSCC---CHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHH
Confidence 7642 345555555444
No 267
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.23 E-value=0.26 Score=45.91 Aligned_cols=91 Identities=12% Similarity=0.186 Sum_probs=59.0
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+ +++|||+--|=.+-.++++ |-.+|||++++-.|+++
T Consensus 36 ~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~ 114 (313)
T 3dz1_A 36 DFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSL 114 (313)
T ss_dssp HHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTC
T ss_pred HHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 4577899999999775442111111 1234566666777 7999999555556666553 33479999999999843
Q ss_pred HhhhcChHHHHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLREEF 309 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~~el 309 (344)
..++++.++++.+.+..
T Consensus 115 ----~s~~~l~~~f~~va~a~ 131 (313)
T 3dz1_A 115 ----RTDEQITTYFRQATEAI 131 (313)
T ss_dssp ----CSHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHhC
Confidence 24677766666665543
No 268
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=94.23 E-value=0.067 Score=48.10 Aligned_cols=75 Identities=24% Similarity=0.282 Sum_probs=48.9
Q ss_pred HHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH-H---------HHHHHHHcCCCEEEEchH
Q 019244 216 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-T---------DVFKALALGASGIFIGRP 285 (344)
Q Consensus 216 ~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g-~---------dv~kalalGAd~V~ig~~ 285 (344)
..+.|.++++.+ ..+ +.++++..+ ..+++.+|||+.. . .+.+++..|||.+.+||+
T Consensus 152 ~~~~G~~g~V~~------------~~e-i~~lr~~~~-~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 217 (246)
T 2yyu_A 152 AKESGLDGVVCS------------ANE-AAFIKERCG-ASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRS 217 (246)
T ss_dssp HHHHTCCEEECC------------HHH-HHHHHHHHC-TTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHH
T ss_pred HHHhCCCEEEeC------------HHH-HHHHHHhcC-CCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHh
Confidence 456888887552 223 556666554 3459999999843 2 377788899999999999
Q ss_pred HHHHhhhcChHHHHHHHHHHHHHHH
Q 019244 286 VVYSLAAEGEKGVRRVLEMLREEFE 310 (344)
Q Consensus 286 ~l~~~~~~G~~~v~~~l~~l~~el~ 310 (344)
++.+ .. ....++.+++++.
T Consensus 218 I~~a---~d---p~~a~~~l~~~i~ 236 (246)
T 2yyu_A 218 LTRA---AD---PLRTYARLQHEWN 236 (246)
T ss_dssp HHTS---SS---HHHHHHHHHHHCC
T ss_pred hcCC---CC---HHHHHHHHHHHHH
Confidence 8753 11 2344555555443
No 269
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=93.97 E-value=0.72 Score=43.65 Aligned_cols=129 Identities=22% Similarity=0.305 Sum_probs=75.4
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHHH----HHHHHcCCcEEEEccCCCCCCCC---chhhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAEDA----RIAVQAGAAGIIVSNHGARQLDY---VPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~a----~~~~~~G~d~I~v~~~gG~~~~~---g~~~~~~l~~i~~~~~~~~~v 257 (344)
++..++++.+ +++||++|..+ +.++. ..+...|..-+++.-+|.+.... -...+.+++.+++.. .+||
T Consensus 202 n~~LL~~va~-~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~--~lpV 278 (350)
T 1vr6_A 202 NFRLLSKAGS-YNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKES--HLPI 278 (350)
T ss_dssp CHHHHHHHHT-TCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCE
T ss_pred CHHHHHHHHc-cCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhh--CCCE
Confidence 4556777774 69999999874 56663 34556788677775566543311 112334556665554 5899
Q ss_pred EEec----CCCC--HHHHHHHHHcCCCEEEEchHHHHHhh-hcChHH-HHHHHHHHHHHHHHHHHHhCC
Q 019244 258 FLDG----GVRR--GTDVFKALALGASGIFIGRPVVYSLA-AEGEKG-VRRVLEMLREEFELAMALSGC 318 (344)
Q Consensus 258 ia~G----GIr~--g~dv~kalalGAd~V~ig~~~l~~~~-~~G~~~-v~~~l~~l~~el~~~m~~~G~ 318 (344)
+++. |-+. ..=...++++||++++|-+.+--.-+ ++|... --+-++.|.++++..-..+|.
T Consensus 279 i~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~ir~i~~alg~ 347 (350)
T 1vr6_A 279 LVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKLADALGV 347 (350)
T ss_dssp EECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHHHHHHHHhCc
Confidence 8843 4432 23345678899999999986532110 123211 012345666666666666663
No 270
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.84 E-value=1.2 Score=42.71 Aligned_cols=83 Identities=12% Similarity=0.041 Sum_probs=61.3
Q ss_pred HHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 188 WKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
++.+.+.++..+++++ -.+.+.+.+..+.+.|+|.+.|... -...+..|..+.+ ...|||.+-|..|-+
T Consensus 103 ~~~L~~~~~~~Gi~~~-stpfD~~svd~l~~~~vd~~KIgS~-------~~~N~pLL~~va~---~gKPViLStGmaTl~ 171 (385)
T 1vli_A 103 ILPLLDYCREKQVIFL-STVCDEGSADLLQSTSPSAFKIASY-------EINHLPLLKYVAR---LNRPMIFSTAGAEIS 171 (385)
T ss_dssp HHHHHHHHHHTTCEEE-CBCCSHHHHHHHHTTCCSCEEECGG-------GTTCHHHHHHHHT---TCSCEEEECTTCCHH
T ss_pred HHHHHHHHHHcCCcEE-EccCCHHHHHHHHhcCCCEEEECcc-------cccCHHHHHHHHh---cCCeEEEECCCCCHH
Confidence 4567777777888866 3467889999999999999999531 1234566766653 368999999999999
Q ss_pred HHHHHHH----cCC-CEEE
Q 019244 268 DVFKALA----LGA-SGIF 281 (344)
Q Consensus 268 dv~kala----lGA-d~V~ 281 (344)
++..|+. .|. +.+.
T Consensus 172 Ei~~Ave~i~~~Gn~~iiL 190 (385)
T 1vli_A 172 DVHEAWRTIRAEGNNQIAI 190 (385)
T ss_dssp HHHHHHHHHHTTTCCCEEE
T ss_pred HHHHHHHHHHHCCCCcEEE
Confidence 9887764 476 4444
No 271
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=93.84 E-value=0.76 Score=43.62 Aligned_cols=89 Identities=12% Similarity=0.073 Sum_probs=66.9
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 186 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~iPIa 255 (382)
T 1rvk_A 186 DLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGFDWIEEP--------MDEQSLSSYKWLSDNL--DIPVV 255 (382)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTCSEEECC--------SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEeCC--------CChhhHHHHHHHHhhC--CCCEE
Confidence 346788899877 588888753 456554 55667888887421 1123567788887776 79999
Q ss_pred EecCCCC-HHHHHHHHHcC-CCEEEEchH
Q 019244 259 LDGGVRR-GTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 259 a~GGIr~-g~dv~kalalG-Ad~V~ig~~ 285 (344)
+++.+.+ ..|+.+++..| +|.|++--.
T Consensus 256 ~dE~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 256 GPESAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp ECSSCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred EeCCccCcHHHHHHHHHcCCCCEEeeCch
Confidence 9999999 99999999987 799998643
No 272
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.82 E-value=0.21 Score=47.54 Aligned_cols=92 Identities=20% Similarity=0.246 Sum_probs=58.5
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+.-|=.+-.++++ |-.+|||++++-.|++
T Consensus 86 v~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY 165 (360)
T 4dpp_A 86 VNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYY 165 (360)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45678999999999775442111111 123455556666677899998555455566554 3347999999999977
Q ss_pred HHhhhcChHHHHHHHHHHHH
Q 019244 288 YSLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~~~~~G~~~v~~~l~~l~~ 307 (344)
+. -.++++.++++.+.+
T Consensus 166 ~k---~sq~gl~~hf~~IA~ 182 (360)
T 4dpp_A 166 GK---TSIEGLIAHFQSVLH 182 (360)
T ss_dssp SC---CCHHHHHHHHHTTGG
T ss_pred CC---CCHHHHHHHHHHHHH
Confidence 53 245666666555433
No 273
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.81 E-value=0.26 Score=45.58 Aligned_cols=89 Identities=9% Similarity=0.054 Sum_probs=60.4
Q ss_pred HHHHHHHhc-CCcEEEEeec----------CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 190 DVKWLQTIT-KLPILVKGVL----------TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 190 ~i~~i~~~~-~~PvivK~v~----------~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
.|+.+++.- +.++.|.... ..+.++...++|||.|.+- ++++.+.+.++.+.+ ++|++
T Consensus 139 ~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e---------~~~~~~~~~~i~~~~--~iP~~ 207 (295)
T 1xg4_A 139 RIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPE---------AITELAMYRQFADAV--QVPIL 207 (295)
T ss_dssp HHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEET---------TCCSHHHHHHHHHHH--CSCBE
T ss_pred HHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEe---------CCCCHHHHHHHHHHc--CCCEE
Confidence 455555554 4556555532 1245788999999999983 245677888888888 68998
Q ss_pred EecCC--CCH-HHHHHHHHcCCCEEEEchHHHHH
Q 019244 259 LDGGV--RRG-TDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 259 a~GGI--r~g-~dv~kalalGAd~V~ig~~~l~~ 289 (344)
++.-. .++ ....+.-.+|.+.|.++...+.+
T Consensus 208 ~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~a 241 (295)
T 1xg4_A 208 ANITEFGATPLFTTDELRSAHVAMALYPLSAFRA 241 (295)
T ss_dssp EECCSSSSSCCCCHHHHHHTTCSEEEESSHHHHH
T ss_pred EEecccCCCCCCCHHHHHHcCCCEEEEChHHHHH
Confidence 75432 222 33445556999999999988765
No 274
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=93.78 E-value=0.18 Score=47.62 Aligned_cols=89 Identities=13% Similarity=0.137 Sum_probs=53.6
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYS 289 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~~ 289 (344)
+.+++.|+|+|.+.|+-|-...-...-...+-+. .+.+++|||+--|=.+-.++++ |-.+|||++++-.|+++.
T Consensus 54 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~ 131 (344)
T 2hmc_A 54 KELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSR 131 (344)
T ss_dssp HHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSS
T ss_pred HHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCC
Confidence 3467899999999765442111111111222223 3346899998555555555543 334799999999998764
Q ss_pred -hhhcChHHHHHHHHHHHH
Q 019244 290 -LAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 290 -~~~~G~~~v~~~l~~l~~ 307 (344)
. .++++.++++.+.+
T Consensus 132 ~~---s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 132 GS---VIAAQKAHFKAILS 147 (344)
T ss_dssp TT---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHh
Confidence 2 35666666655543
No 275
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.78 E-value=0.097 Score=48.53 Aligned_cols=90 Identities=18% Similarity=0.203 Sum_probs=56.3
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+.-|=.+-.++++ +-.+|||++++..|+++
T Consensus 32 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 111 (300)
T 3eb2_A 32 DDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYF 111 (300)
T ss_dssp HHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSS
T ss_pred HHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 4577899999988765442111111 123455566666677899998545445555543 33589999999999987
Q ss_pred HhhhcChHHHHHHHHHHH
Q 019244 289 SLAAEGEKGVRRVLEMLR 306 (344)
Q Consensus 289 ~~~~~G~~~v~~~l~~l~ 306 (344)
.. .++++.++++.+.
T Consensus 112 ~~---~~~~l~~~f~~va 126 (300)
T 3eb2_A 112 PL---KDAQIESYFRAIA 126 (300)
T ss_dssp CC---CHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHH
Confidence 42 4555555555443
No 276
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=93.72 E-value=0.58 Score=41.56 Aligned_cols=94 Identities=17% Similarity=0.255 Sum_probs=63.8
Q ss_pred CCCCCcHHHHHHHHHhcCCcEEEEee-c-----C-HHHH----HHHHHcCCcEEEEccCCCC--CCCCchhhHHHHHHHH
Q 019244 182 IDRSLSWKDVKWLQTITKLPILVKGV-L-----T-AEDA----RIAVQAGAAGIIVSNHGAR--QLDYVPATIMALEEVV 248 (344)
Q Consensus 182 ~~~~~~~~~i~~i~~~~~~PvivK~v-~-----~-~~~a----~~~~~~G~d~I~v~~~gG~--~~~~g~~~~~~l~~i~ 248 (344)
.+++.+.+.++.+++.+++|+| |-+ . . .+++ ..+....+|++.++..||+ .+|| +.+..+.
T Consensus 98 LHG~E~~~~~~~l~~~~~~~vi-Ka~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~~fDW-----~~~~~~~ 171 (228)
T 4aaj_A 98 VHSNALPQTIDTLKKEFGVFVM-KAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTGAGSGKLHDL-----RVSSLVA 171 (228)
T ss_dssp ECSCCCHHHHHHHHHHHCCEEE-EEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC-------CCC-----HHHHHHH
T ss_pred cccccCHHHHHHHhhccCceEE-EEEEecccccchhhhHHHHHHHHhccCCCEEccCCCCCCcCcCCh-----HHHHHhh
Confidence 4556677889999998888876 543 1 1 2332 3445668999999887765 4566 3344332
Q ss_pred HHccCCCcEEEecCCCCHHHHHHHHH-cCCCEEEEchHH
Q 019244 249 KATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGRPV 286 (344)
Q Consensus 249 ~~~~~~~~via~GGIr~g~dv~kala-lGAd~V~ig~~~ 286 (344)
. +.|++.+||+. ++.|.+|+. .+..+|=+.+-+
T Consensus 172 ~----~~p~iLAGGL~-peNV~~Ai~~~~P~gVDVsSGV 205 (228)
T 4aaj_A 172 R----KIPVIVAGGLN-AENVEEVIKVVKPYGVDVSSGV 205 (228)
T ss_dssp H----HSCEEEESSCC-TTTHHHHHHHHCCSEEEESGGG
T ss_pred h----cCCeEEECCCC-HHHHHHHHHHhCCCEEEeCCCC
Confidence 2 47999999996 899999997 799999888865
No 277
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.68 E-value=0.13 Score=47.37 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=50.0
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 288 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~ 288 (344)
+.+++.|+++|.+.|+-|-...-.. .-.+.+..+.+.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+++
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (291)
T 3a5f_A 29 EWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYN 108 (291)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 4577899999999775443111111 123455556666667899998555555566553 33479999999999876
Q ss_pred H
Q 019244 289 S 289 (344)
Q Consensus 289 ~ 289 (344)
.
T Consensus 109 ~ 109 (291)
T 3a5f_A 109 K 109 (291)
T ss_dssp C
T ss_pred C
Confidence 4
No 278
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=93.57 E-value=5 Score=37.83 Aligned_cols=126 Identities=12% Similarity=0.098 Sum_probs=67.0
Q ss_pred cHHHHHHHHHhcCCcEEEEeec-CHHHHHH----HHHcCCcEEEEccCCCCCCCCch--hhHHHHHHHHHHccCCCcEEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL-TAEDARI----AVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~-~~~~a~~----~~~~G~d~I~v~~~gG~~~~~g~--~~~~~l~~i~~~~~~~~~via 259 (344)
++..|+++.+ +++||++|..+ |.++... +.+.|.+.+.+ |+-+....-+ -.+.+++.+++..+ .+||..
T Consensus 124 N~pLL~~va~-~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLl--hC~s~YPt~~~~~nL~aI~~Lk~~fp-~lpVG~ 199 (350)
T 3g8r_A 124 DWPLLERIAR-SDKPVVASTAGARREDIDKVVSFMLHRGKDLTIM--HCVAEYPTPDDHLHLARIKTLRQQYA-GVRIGY 199 (350)
T ss_dssp CHHHHHHHHT-SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEE--ECCCCSSCCGGGCCTTHHHHHHHHCT-TSEEEE
T ss_pred CHHHHHHHHh-hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEE--ecCCCCCCCcccCCHHHHHHHHHHCC-CCCEEc
Confidence 5677888876 69999999864 5665443 34567764443 2222221111 12345666665542 588877
Q ss_pred ec---CCCCHHHHHHHHHcCCCEEEEchHHHHH--hhhcChHH-HHHHHHHHHHHHHHHHHHhCCC
Q 019244 260 DG---GVRRGTDVFKALALGASGIFIGRPVVYS--LAAEGEKG-VRRVLEMLREEFELAMALSGCR 319 (344)
Q Consensus 260 ~G---GIr~g~dv~kalalGAd~V~ig~~~l~~--~~~~G~~~-v~~~l~~l~~el~~~m~~~G~~ 319 (344)
|+ |-+. .-+..|+++||+.+ =+.|--. ...++... --+-++.|.++++..-..+|..
T Consensus 200 SdHt~g~~~-~~~~AAvAlGA~vI--EkH~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~alG~~ 262 (350)
T 3g8r_A 200 STHEDPDLM-EPIMLAVAQGATVF--EKHVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLGDG 262 (350)
T ss_dssp EECCCSSCC-HHHHHHHHTTCCEE--EEEBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHHCCT
T ss_pred CCCCCCCcc-HHHHHHHHcCCCEE--EEecCcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 62 2122 22357899999743 3322110 01111100 0123566777777777777764
No 279
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=93.56 E-value=1.8 Score=39.43 Aligned_cols=97 Identities=22% Similarity=0.342 Sum_probs=60.7
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHHH----HHHHHcCCcEEEEccCCCCCCCC---chhhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAEDA----RIAVQAGAAGIIVSNHGARQLDY---VPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~a----~~~~~~G~d~I~v~~~gG~~~~~---g~~~~~~l~~i~~~~~~~~~v 257 (344)
++..++++.+ +++||++|..+ +.++. ..+...|.+-+++.-.|.+.... -...+..++.+++.. .+||
T Consensus 134 n~~ll~~~a~-~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~--~lpV 210 (276)
T 1vs1_A 134 NFPLLREVGR-SGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEAT--HLPV 210 (276)
T ss_dssp CHHHHHHHHH-HTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHB--SSCE
T ss_pred CHHHHHHHHc-cCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHh--CCCE
Confidence 4456777765 69999999874 56654 34556787555554335543311 123455666666654 5899
Q ss_pred EEec----CCCC--HHHHHHHHHcCCCEEEEchHH
Q 019244 258 FLDG----GVRR--GTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 258 ia~G----GIr~--g~dv~kalalGAd~V~ig~~~ 286 (344)
+++. |.+. ..=...++++||++++|-+.+
T Consensus 211 i~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 211 IVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp EECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred EEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 7743 5443 233446788999999999865
No 280
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=93.52 E-value=0.13 Score=46.13 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=43.0
Q ss_pred HHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH----------HHHHHHHcCCCEEEEchH
Q 019244 216 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGIFIGRP 285 (344)
Q Consensus 216 ~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~----------dv~kalalGAd~V~ig~~ 285 (344)
..+.|.++++.+. .+ +.++++..+ +.+++.+|||+... .+.+++..|||.+.+||+
T Consensus 158 ~~~~G~~g~V~~~------------~e-i~~lr~~~~-~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 223 (245)
T 1eix_A 158 TQKCGLDGVVCSA------------QE-AVRFKQVFG-QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRP 223 (245)
T ss_dssp HHHTTCSEEECCG------------GG-HHHHHHHHC-SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHH
T ss_pred HHHcCCCeEEeCH------------HH-HHHHHHhcC-CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHH
Confidence 5578888876532 23 555555553 46899999999531 367788999999999999
Q ss_pred HHH
Q 019244 286 VVY 288 (344)
Q Consensus 286 ~l~ 288 (344)
++.
T Consensus 224 I~~ 226 (245)
T 1eix_A 224 VTQ 226 (245)
T ss_dssp HHT
T ss_pred HcC
Confidence 875
No 281
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=93.51 E-value=0.11 Score=46.31 Aligned_cols=76 Identities=22% Similarity=0.331 Sum_probs=49.4
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHH----------HHHHHHcCCCEEEEc
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGIFIG 283 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~d----------v~kalalGAd~V~ig 283 (344)
....+.|.++++.+. +-+.++++..+ ..+++.+|||+.... ..+++..|||.+.+|
T Consensus 149 ~~~~~~G~~g~v~~~-------------~~i~~lr~~~~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvG 214 (239)
T 1dbt_A 149 KQAEESGLDGVVCSV-------------HEAKAIYQAVS-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVG 214 (239)
T ss_dssp HHHHHTTCSEEECCG-------------GGHHHHTTTSC-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEEC
T ss_pred HHHHHhCCCEEEECH-------------HHHHHHHHhcC-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEC
Confidence 334678888876532 22344444443 468999999986543 367889999999999
Q ss_pred hHHHHHhhhcChHHHHHHHHHHHHHH
Q 019244 284 RPVVYSLAAEGEKGVRRVLEMLREEF 309 (344)
Q Consensus 284 ~~~l~~~~~~G~~~v~~~l~~l~~el 309 (344)
|+++.+ .. ....++.+++++
T Consensus 215 r~I~~a---~d---p~~a~~~l~~~i 234 (239)
T 1dbt_A 215 RSITKA---ED---PVKAYKAVRLEW 234 (239)
T ss_dssp HHHHTS---SC---HHHHHHHHHHHH
T ss_pred hhhcCC---CC---HHHHHHHHHHHH
Confidence 998752 12 234455555544
No 282
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=93.32 E-value=0.29 Score=45.29 Aligned_cols=85 Identities=19% Similarity=0.153 Sum_probs=59.9
Q ss_pred HHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC--CCCc---hhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 193 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ--LDYV---PATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 193 ~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~--~~~g---~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
-+.+..+.- ++..+.+++.|+...++||+.|.+-...-+. ...| ....+.|.++++.+ .+||++-+++..-.
T Consensus 15 ~~~~~~kgg-v~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v--~iPvl~k~~i~~id 91 (297)
T 4adt_A 15 GWCEMLKGG-VIMDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI--SINVLAKVRIGHFV 91 (297)
T ss_dssp HHHHTTTTC-EEEEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC--CSEEEEEEETTCHH
T ss_pred hHHHHhcCC-cccCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc--CCCEEEeccCCcHH
Confidence 344444433 3456788999999999999999875211000 0011 23567888888777 79999998998877
Q ss_pred HHHHHHHcCCCEE
Q 019244 268 DVFKALALGASGI 280 (344)
Q Consensus 268 dv~kalalGAd~V 280 (344)
++-.+.++|||+|
T Consensus 92 e~qil~aaGAD~I 104 (297)
T 4adt_A 92 EAQILEELKVDML 104 (297)
T ss_dssp HHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEE
Confidence 7777788999999
No 283
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=93.31 E-value=0.67 Score=51.41 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=85.0
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHc-----cCCCcEEE-ecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIPVFL-DGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~-----~~~~~via-~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
++|..+++.|+..|++|..+-..-..-.|.+-++..+..++ +.++.|++ +|-+|+.-|++-.+-.||++|.=--
T Consensus 591 ~~a~~av~~g~~iliLsDr~~~~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyl 670 (1479)
T 1ea0_A 591 QETEDAVRGGATHVILTDEAMGPARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVNAYL 670 (1479)
T ss_dssp HHHHHHHHHTCCEEEEECTTCBTTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEEECHH
T ss_pred HHHHHHHHCCCcEEEECCCCCCCCccCcCHHHHHHHHHHHHHhcCccccceEEEEeCCchhHHHHHHHHhcCccccCHHH
Confidence 45788899999999999764211111235554554444432 34677777 7899999999999999999996222
Q ss_pred HH--HHHhhhcC-------hHHHHHHHHHHHHHHHHHHHHhCCCCHhhhccccee
Q 019244 285 PV--VYSLAAEG-------EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 330 (344)
Q Consensus 285 ~~--l~~~~~~G-------~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~ 330 (344)
++ +..+...| ++.+.++++.+.++|...|..+|.++++.-++..+.
T Consensus 671 a~e~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiF 725 (1479)
T 1ea0_A 671 AQEAIAERHRRGLFGSMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNF 725 (1479)
T ss_dssp HHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCCE
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceee
Confidence 22 22222223 357899999999999999999999999988876654
No 284
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.20 E-value=0.3 Score=44.84 Aligned_cols=69 Identities=30% Similarity=0.399 Sum_probs=53.9
Q ss_pred cCHHHHHHHHHcCCcEEEEccC---CCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH-------------HHHHH
Q 019244 208 LTAEDARIAVQAGAAGIIVSNH---GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-------------TDVFK 271 (344)
Q Consensus 208 ~~~~~a~~~~~~G~d~I~v~~~---gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g-------------~dv~k 271 (344)
.+.+++..+.+.|||.|-+... ||. -|+...+..+++.+ ++||.+.=--|.+ .|+..
T Consensus 47 ~s~~~a~~A~~gGAdRIELc~~l~~GGl-----TPS~g~i~~a~~~~--~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~ 119 (287)
T 3iwp_A 47 DSVESAVNAERGGADRIELCSGLSEGGT-----TPSMGVLQVVKQSV--QIPVFVMIRPRGGDFLYSDREIEVMKADIRL 119 (287)
T ss_dssp SSHHHHHHHHHHTCSEEEECBCGGGTCB-----CCCHHHHHHHHTTC--CSCEEEECCSSSSCSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCCCCCCCC-----CCCHHHHHHHHHhc--CCCeEEEEecCCCCcccCHHHHHHHHHHHHH
Confidence 7999999999999999998743 443 35566777776655 6888885444444 79999
Q ss_pred HHHcCCCEEEEc
Q 019244 272 ALALGASGIFIG 283 (344)
Q Consensus 272 alalGAd~V~ig 283 (344)
+.++|||.|.+|
T Consensus 120 ~~~~GAdGvVfG 131 (287)
T 3iwp_A 120 AKLYGADGLVFG 131 (287)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHcCCCEEEEe
Confidence 999999999999
No 285
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=92.97 E-value=0.35 Score=44.33 Aligned_cols=79 Identities=24% Similarity=0.288 Sum_probs=56.8
Q ss_pred HhcCCcEEEEeecCHHHHHHHHHcCCcEEEEcc--------CCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH
Q 019244 196 TITKLPILVKGVLTAEDARIAVQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 267 (344)
Q Consensus 196 ~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~--------~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~ 267 (344)
+..+.|+++ .+...+.++.+.++|+++|.+-. .+|... ....+.+.++++.. ++|++...++.+..
T Consensus 18 ~~~~~~~i~-~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~---~~~~~~i~~i~~~~--~~Pvi~~~~~~~~~ 91 (297)
T 2zbt_A 18 EMFKGGVIM-DVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVAR---MSDPKIIKEIMAAV--SIPVMAKVRIGHFV 91 (297)
T ss_dssp GGGTTEEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCC---CCCHHHHHHHHTTC--SSCEEEEEETTCHH
T ss_pred HHhhCCeee-eechHHHHHHHHHCCCcEEEeccccchHHHhhcCCcc---CCCHHHHHHHHHhc--CCCeEEEeccCCHH
Confidence 334667776 45568889999999999997721 122111 12345666666544 68999988888888
Q ss_pred HHHHHHHcCCCEE
Q 019244 268 DVFKALALGASGI 280 (344)
Q Consensus 268 dv~kalalGAd~V 280 (344)
++-.++++|||.|
T Consensus 92 ~~~~~~~aGad~v 104 (297)
T 2zbt_A 92 EAMILEAIGVDFI 104 (297)
T ss_dssp HHHHHHHTTCSEE
T ss_pred HHHHHHHCCCCEE
Confidence 8888999999999
No 286
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.95 E-value=0.31 Score=48.53 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=52.6
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
.+.++.+.++|+|.|.+....|+ ....++.+.++++..+ ++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~----~~~v~~~i~~i~~~~~-~~~vi~-g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGH----SQGVIDKVKEVRAKYP-SLNIIA-GNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhhccceEEecccccc----hhhhhhHHHHHHHhCC-CceEEe-eeeccHHHHHHHHHhCCCEEEEC
Confidence 56788899999999999754321 2345567788877653 577775 78999999999999999999874
No 287
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.84 E-value=0.5 Score=42.78 Aligned_cols=42 Identities=29% Similarity=0.291 Sum_probs=36.6
Q ss_pred cHHHHHHHHHhcCCcEEEEeec-CHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTITKLPILVKGVL-TAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~-~~~~a~~~~~~G~d~I~v~~ 228 (344)
..+.++++++..++||.+.+.. +++++..+..+|+|+++|.+
T Consensus 193 ~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 193 LHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp CHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 4678999999889999998765 59999999999999999954
No 288
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=92.80 E-value=0.32 Score=46.80 Aligned_cols=68 Identities=12% Similarity=0.231 Sum_probs=50.8
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
.+.++.+.++|+|+|.+....|. -...++.+.++++..+ ++||++ |++.+.+++.++..+|||++.+|
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~----~~~~~e~i~~ir~~~~-~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGH----STRIIELIKKIKTKYP-NLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCCCC----hHHHHHHHHHHHHHCC-CCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 46678889999999998322121 1234566777777663 688887 77889999999999999999993
No 289
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=92.68 E-value=0.66 Score=42.56 Aligned_cols=95 Identities=16% Similarity=0.254 Sum_probs=63.9
Q ss_pred CCCcHHHHHHHHHhc-CCcEEEEee----cCH-HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 184 RSLSWKDVKWLQTIT-KLPILVKGV----LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 184 ~~~~~~~i~~i~~~~-~~PvivK~v----~~~-~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
...+.+..+++.+.. ++++.+--. .++ +-.+.+.+.|++.|-.||.- ......++.|.++.+...++++|
T Consensus 137 g~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~----~~a~~Gl~~Lk~Lv~~a~~rI~I 212 (287)
T 3iwp_A 137 GHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCD----SSALEGLPLIKRLIEQAKGRIVV 212 (287)
T ss_dssp SCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTS----SSTTTTHHHHHHHHHHHTTSSEE
T ss_pred CCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCC----CChHHhHHHHHHHHHHhCCCCEE
Confidence 345666677666655 466655433 234 34577889999999886531 12234456666666666668999
Q ss_pred EEecCCCCHHHHHHHHH-cCCCEEEEc
Q 019244 258 FLDGGVRRGTDVFKALA-LGASGIFIG 283 (344)
Q Consensus 258 ia~GGIr~g~dv~kala-lGAd~V~ig 283 (344)
++.|||+ ...+.+.+. +|++.+=..
T Consensus 213 maGGGV~-~~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 213 MPGGGIT-DRNLQRILEGSGATEFHCS 238 (287)
T ss_dssp EECTTCC-TTTHHHHHHHHCCSEEEEC
T ss_pred EECCCcC-HHHHHHHHHhhCCCEEeEC
Confidence 9999998 577777776 899887654
No 290
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=92.63 E-value=0.65 Score=42.89 Aligned_cols=71 Identities=20% Similarity=0.135 Sum_probs=49.9
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
+.++...++|||.|.+-. +.++.+.+.++.+.+..++|+++.-+-....++.+.-.+|.+.|.++...+.+
T Consensus 174 ~Ra~ay~eAGAd~i~~e~--------~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 244 (295)
T 1s2w_A 174 KRAEAYRNAGADAILMHS--------KKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRA 244 (295)
T ss_dssp HHHHHHHHTTCSEEEECC--------CSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHHHHHHHcCCCEEEEcC--------CCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 457789999999999831 13455677778777755699998633111123556667999999999887765
No 291
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=92.62 E-value=0.88 Score=43.50 Aligned_cols=88 Identities=14% Similarity=0.070 Sum_probs=65.0
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHH-HHccCCCcE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV-KATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~-~~~~~~~~v 257 (344)
+.+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.+++ +.. ++||
T Consensus 181 d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~~--~iPI 250 (389)
T 3ozy_A 181 DAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFEEP--------LSIDDIEGHRILRAQGT--PVRI 250 (389)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEESC--------SCTTCHHHHHHHHTTCC--SSEE
T ss_pred HHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEECC--------CCcccHHHHHHHHhcCC--CCCE
Confidence 345688888887 578888753 456554 56778899988521 1123566777776 544 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 258 FLDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
++++.+.+..|+.+++..| +|.|++--
T Consensus 251 a~dE~i~~~~~~~~~i~~~~~d~v~ik~ 278 (389)
T 3ozy_A 251 ATGENLYTRNAFNDYIRNDAIDVLQADA 278 (389)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999999987 79988754
No 292
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=92.59 E-value=1.7 Score=40.90 Aligned_cols=88 Identities=9% Similarity=0.063 Sum_probs=64.9
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .+.++ ++.+.+.|+++|-= ...+..++.+.++++.. ++||++
T Consensus 175 ~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~ipIa~ 244 (370)
T 1nu5_A 175 LEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELVEQ--------PVPRANFGALRRLTEQN--GVAILA 244 (370)
T ss_dssp HHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEEEC--------CSCTTCHHHHHHHHHHC--SSEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCcceEeC--------CCCcccHHHHHHHHHhC--CCCEEe
Confidence 45678888776 377777743 45555 45577889988741 11234567788887766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
++.+.+..|+.+++..| +|.|++--.
T Consensus 245 dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (370)
T 1nu5_A 245 DESLSSLSSAFELARDHAVDAFSLKLC 271 (370)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEEchh
Confidence 99999999999999987 799998643
No 293
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=92.55 E-value=0.42 Score=44.89 Aligned_cols=100 Identities=14% Similarity=0.161 Sum_probs=66.7
Q ss_pred cHHHHHHHHHhc--CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCC-----c--------hhhHHHHHHHHH--
Q 019244 187 SWKDVKWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDY-----V--------PATIMALEEVVK-- 249 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~-----g--------~~~~~~l~~i~~-- 249 (344)
+|+-++.++... ++++-+=.+.|...+..+.++|+..|-. .-||-.|| | -+.+..+.++.+
T Consensus 140 T~eGl~A~~~L~~~GI~~N~TliFS~~Qa~~aa~AGa~~ISP--FVgRi~D~~~~~~g~~~~~~~~d~Gv~~v~~i~~~y 217 (334)
T 3hjz_A 140 TWEGIKAAEILEKEGIKCNLTLLFNFCQAVTCANANITLISP--FVGRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYF 217 (334)
T ss_dssp SHHHHHHHHHHHHTTCCEEEESCCSHHHHHHHHHTTCSEECC--BHHHHHHHHHHHHCCCCCCGGGCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEe--eccHHHHHhhhccCCcccccccCcHHHHHHHHHHHH
Confidence 576554444332 8898888889999999999999988844 22332221 1 123344444443
Q ss_pred -HccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhh
Q 019244 250 -ATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 291 (344)
Q Consensus 250 -~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~ 291 (344)
..+.+..|++. .+|+..++.. .+|+|.+-+.-.++..+.
T Consensus 218 ~~~g~~T~vl~A-SfRn~~~v~~--laG~d~~Tipp~ll~~L~ 257 (334)
T 3hjz_A 218 KEKGFKTEVMGA-SFRNLDEIKE--LAGCDLLTIAPKFLEELK 257 (334)
T ss_dssp HHHTCCCEEEEB-CCSSHHHHHH--TTTCSEEEECHHHHHHHH
T ss_pred HHcCCCCEEEEe-cCCCHHHHHH--HhCCCEEEcCHHHHHHHH
Confidence 33335666655 5999999987 469999988888877654
No 294
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=92.45 E-value=5.1 Score=36.03 Aligned_cols=92 Identities=11% Similarity=0.169 Sum_probs=57.1
Q ss_pred CcHHHHHHHHHhc-CCcEEEEee----cCHH-HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 186 LSWKDVKWLQTIT-KLPILVKGV----LTAE-DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 186 ~~~~~i~~i~~~~-~~PvivK~v----~~~~-~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
++.+.++++.+.. ++|+.+--. .++. ..+.+.+.|++.|-.||...+ ....++.|.++.+... ++.|++
T Consensus 101 iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~~----a~~g~~~L~~Lv~~a~-~i~Im~ 175 (256)
T 1twd_A 101 VDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSD----ALQGLSKIMELIAHRD-APIIMA 175 (256)
T ss_dssp BCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSSS----TTTTHHHHHHHHTSSS-CCEEEE
T ss_pred cCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC----HHHHHHHHHHHHHhhC-CcEEEe
Confidence 3455555555544 456554332 2343 357889999999987653211 1223445555554444 899999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 260 DGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 260 ~GGIr~g~dv~kalalGAd~V~ig 283 (344)
-|||+ ...+.+.+..|++.+=.+
T Consensus 176 GgGv~-~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 176 GAGVR-AENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp ESSCC-TTTHHHHHHHTCSEEEEC
T ss_pred cCCcC-HHHHHHHHHcCCCeEeEC
Confidence 99998 466666668899888755
No 295
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=92.41 E-value=0.63 Score=42.01 Aligned_cols=70 Identities=27% Similarity=0.323 Sum_probs=54.6
Q ss_pred cCHHHHHHHHHcCCcEEEEccC---CCCCCCCchhhHHHHHHHHHHccCCCcEEE-----ecCCCCH--------HHHHH
Q 019244 208 LTAEDARIAVQAGAAGIIVSNH---GARQLDYVPATIMALEEVVKATQGRIPVFL-----DGGVRRG--------TDVFK 271 (344)
Q Consensus 208 ~~~~~a~~~~~~G~d~I~v~~~---gG~~~~~g~~~~~~l~~i~~~~~~~~~via-----~GGIr~g--------~dv~k 271 (344)
.+.+++..+.+.|||-|-+... ||. -|++..+..+++.+ ++||.+ .|++... .|+..
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L~~GGl-----TPS~g~i~~~~~~~--~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~ 81 (256)
T 1twd_A 9 YSMECALTAQQNGADRVELCAAPKEGGL-----TPSLGVLKSVRQRV--TIPVHPIIRPRGGDFCYSDGEFAAILEDVRT 81 (256)
T ss_dssp SSHHHHHHHHHTTCSEEEECBCGGGTCB-----CCCHHHHHHHHHHC--CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCcccCCC-----CCCHHHHHHHHHHc--CCceEEEECCCCCCCcCCHHHHHHHHHHHHH
Confidence 7899999999999999998753 443 35666777777766 688887 4555554 37778
Q ss_pred HHHcCCCEEEEch
Q 019244 272 ALALGASGIFIGR 284 (344)
Q Consensus 272 alalGAd~V~ig~ 284 (344)
+..+|||.|.+|-
T Consensus 82 ~~~~GadGvV~G~ 94 (256)
T 1twd_A 82 VRELGFPGLVTGV 94 (256)
T ss_dssp HHHTTCSEEEECC
T ss_pred HHHcCCCEEEEee
Confidence 8889999999993
No 296
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=92.40 E-value=0.87 Score=41.95 Aligned_cols=87 Identities=26% Similarity=0.286 Sum_probs=59.4
Q ss_pred cHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEcc--------CCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~--------~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
++...+.+.+..+.++++ .....+.++.+.++|+++|.+-+ .+|.. .....+.+.++++.+ ++||+
T Consensus 9 ~~~~~~~~~~~~~~g~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~---~~~~~~~i~~I~~~~--~iPv~ 82 (305)
T 2nv1_A 9 TERVKRGMAEMQKGGVIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVA---RMADPTIVEEVMNAV--SIPVM 82 (305)
T ss_dssp CHHHHHHHHHTTTTCEEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCCC---CCCCHHHHHHHHHHC--SSCEE
T ss_pred cHHHHHHHHHHccCCeee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcc---cCCCHHHHHHHHHhC--CCCEE
Confidence 344555566666778887 56778899999999999994322 12211 123456777777765 68988
Q ss_pred EecCCCC--HHHHHHHHHcCCCEEE
Q 019244 259 LDGGVRR--GTDVFKALALGASGIF 281 (344)
Q Consensus 259 a~GGIr~--g~dv~kalalGAd~V~ 281 (344)
+ +++. -.++-.++++|||.|.
T Consensus 83 ~--k~r~g~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 83 A--KARIGHIVEARVLEAMGVDYID 105 (305)
T ss_dssp E--EECTTCHHHHHHHHHHTCSEEE
T ss_pred e--cccccchHHHHHHHHCCCCEEE
Confidence 4 5555 5666777889999996
No 297
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=92.05 E-value=0.24 Score=45.43 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=38.8
Q ss_pred CCcHHHHHHHHHhc--CCcEEEEe-ecCHHHHHHHHHcCCcEEEEcc
Q 019244 185 SLSWKDVKWLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 185 ~~~~~~i~~i~~~~--~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
....+.|+++++.+ ++||++.+ +.++++++.+.++|||+|+|++
T Consensus 211 ~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGS 257 (286)
T 3vk5_A 211 HVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAG 257 (286)
T ss_dssp CCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESG
T ss_pred cCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECc
Confidence 34678899999999 89999986 5899999999999999999965
No 298
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=92.04 E-value=0.59 Score=44.02 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=67.4
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++|+.++.- .+.++ ++.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~iPI~ 244 (359)
T 1mdl_A 175 DLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEP--------TLQHDYEGHQRIQSKL--NVPVQ 244 (359)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEECC--------SCTTCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEECC--------CChhhHHHHHHHHHhC--CCCEE
Confidence 445789999987 588988853 45655 456778899987421 1234567778887765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+++.+.+..|+.+++..| +|.|++-..
T Consensus 245 ~de~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (359)
T 1mdl_A 245 MGENWLGPEEMFKALSIGACRLAMPDAM 272 (359)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEeecch
Confidence 999999999999999987 899998643
No 299
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=91.96 E-value=0.64 Score=44.01 Aligned_cols=89 Identities=15% Similarity=0.110 Sum_probs=67.2
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++|+.++.- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 177 ~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPI~ 246 (371)
T 2ovl_A 177 DVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWIEEP--------TIPDDLVGNARIVRES--GHTIA 246 (371)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHHHH--CSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CCcccHHHHHHHHhhC--CCCEE
Confidence 345689999987 589988853 466554 55667888887421 1234577788887776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+++.+.+..|+.+++..| +|.|++...
T Consensus 247 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 274 (371)
T 2ovl_A 247 GGENLHTLYDFHNAVRAGSLTLPEPDVS 274 (371)
T ss_dssp ECTTCCSHHHHHHHHHHTCCSEECCCTT
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEeeCcc
Confidence 999999999999999987 899988643
No 300
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=91.78 E-value=3.3 Score=40.15 Aligned_cols=89 Identities=18% Similarity=0.126 Sum_probs=66.7
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.+ ++++.+..- .+.++| +.+.+.|+++|--- ..+..++.+.++++.. .+||+
T Consensus 189 d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEeP--------~~~~~~~~~~~l~~~~--~iPIa 258 (433)
T 3rcy_A 189 SVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEP--------VPPDNVGAMAQVARAV--RIPVA 258 (433)
T ss_dssp HHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHHHS--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEECC--------CChhhHHHHHHHHhcc--CCCEE
Confidence 456788999887 478887653 566664 45667888888521 1123567788888776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+++.+.+..|+.+++..| +|.|++--.
T Consensus 259 ~dE~~~~~~~~~~~l~~g~~D~v~~d~~ 286 (433)
T 3rcy_A 259 TGERLTTKAEFAPVLREGAAAILQPALG 286 (433)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred ecCCCCCHHHHHHHHHcCCCCEEEeCch
Confidence 999999999999999987 788887643
No 301
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=91.70 E-value=0.99 Score=41.93 Aligned_cols=80 Identities=19% Similarity=0.182 Sum_probs=58.1
Q ss_pred HHHHHHHHhcCCcEEEEeecC--------HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEe
Q 019244 189 KDVKWLQTITKLPILVKGVLT--------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~~--------~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~ 260 (344)
+.++++++.++.|+.+-...+ .+.++.+.++|+|+|.+.. |. | .+.+..+.+. .++++.
T Consensus 57 ~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~--g~------p-~~~~~~l~~~---gi~vi~- 123 (328)
T 2gjl_A 57 AEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAG--ND------P-GEHIAEFRRH---GVKVIH- 123 (328)
T ss_dssp HHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEE--SC------C-HHHHHHHHHT---TCEEEE-
T ss_pred HHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcC--CC------c-HHHHHHHHHc---CCCEEe-
Confidence 357777777777887766554 3678889999999998742 21 2 3444444432 578875
Q ss_pred cCCCCHHHHHHHHHcCCCEEEE
Q 019244 261 GGVRRGTDVFKALALGASGIFI 282 (344)
Q Consensus 261 GGIr~g~dv~kalalGAd~V~i 282 (344)
.+.+..++.++...|||++.+
T Consensus 124 -~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 124 -KCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp -EESSHHHHHHHHHTTCSEEEE
T ss_pred -eCCCHHHHHHHHHcCCCEEEE
Confidence 388999999999999999998
No 302
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=91.66 E-value=0.58 Score=44.27 Aligned_cols=67 Identities=19% Similarity=0.169 Sum_probs=48.9
Q ss_pred HHHHHHHHc--CCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 211 EDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 211 ~~a~~~~~~--G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
+.+..+.+. |++.+.+....|. ....++.+.++++..+ ++||++ |++.+.+|+.++..+|||+|.++
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~----~~~~~~~i~~lr~~~~-~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGY----SEHFVEFVKDVRKRFP-QHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTT----BHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhccCCCCEEEEEecCCC----cHHHHHHHHHHHHhcC-CCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 345566676 9999887643221 1335677888777653 688885 77899999999999999999775
No 303
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=91.55 E-value=0.16 Score=44.67 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=39.1
Q ss_pred HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHH---H------HHHHHHcCCCEEEE
Q 019244 212 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT---D------VFKALALGASGIFI 282 (344)
Q Consensus 212 ~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~---d------v~kalalGAd~V~i 282 (344)
.++. .+.|+| ++++ + +.+..+++.++ .+ +.++||+--. | ..+ +..|||.+.+
T Consensus 131 ~a~~-~e~G~d-vV~~----------~---~~~~~ir~~~~--~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVv 191 (213)
T 1vqt_A 131 IEKL-NKLGCD-FVLP----------G---PWAKALREKIK--GK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVL 191 (213)
T ss_dssp HHHH-HHHTCE-EECC----------H---HHHHHHTTTCC--SC-EEECCBC---------CCBCHHH-HTTTCSEEEE
T ss_pred HHHH-hcCCCE-EEEc----------H---HHHHHHHHHCC--CC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEE
Confidence 3556 888999 5442 1 34555555443 35 8889997543 2 667 8999999999
Q ss_pred chHHHHH
Q 019244 283 GRPVVYS 289 (344)
Q Consensus 283 g~~~l~~ 289 (344)
||+++.+
T Consensus 192 GR~I~~a 198 (213)
T 1vqt_A 192 GREIYLS 198 (213)
T ss_dssp SHHHHTS
T ss_pred ChhhcCC
Confidence 9999863
No 304
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=91.47 E-value=2.9 Score=39.62 Aligned_cols=86 Identities=14% Similarity=-0.003 Sum_probs=60.2
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHHH----HHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a~----~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.++.- .+.+++. .+.+.|+ +|-= . .+.++.+.++++.. ++||++
T Consensus 176 ~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iEq-------P---~~~~~~~~~l~~~~--~iPIa~ 242 (378)
T 3eez_A 176 IARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV-MFEQ-------P---GETLDDIAAIRPLH--SAPVSV 242 (378)
T ss_dssp HHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC-CEEC-------C---SSSHHHHHHTGGGC--CCCEEE
T ss_pred HHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe-EEec-------C---CCCHHHHHHHHhhC--CCCEEE
Confidence 45677888877 477887753 4566543 3445665 5531 0 12556666666554 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchHH
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGRPV 286 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~~~ 286 (344)
++.+.+..|+.+++..| +|.|++....
T Consensus 243 dE~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 243 DECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred CCCCCCHHHHHHHHHcCCCCEEEeCchh
Confidence 99999999999999987 7999987644
No 305
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=91.45 E-value=2.7 Score=39.63 Aligned_cols=90 Identities=17% Similarity=0.124 Sum_probs=63.6
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHHH----HHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a~----~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ +.++.+..- .+.+++. .+.+.|+++|-= ...+..++.+.++++.. .+||++
T Consensus 172 ~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 241 (367)
T 3dg3_A 172 TAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDLLFAEE--------LCPADDVLSRRRLVGQL--DMPFIA 241 (367)
T ss_dssp HHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCCSCEES--------CSCTTSHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCEEEC--------CCCcccHHHHHHHHHhC--CCCEEe
Confidence 45688888876 477777643 4666654 344567777641 01123466777777766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchHHH
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGRPVV 287 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~~~l 287 (344)
++.+.+..|+.+++..| +|.|++--...
T Consensus 242 dE~~~~~~~~~~~i~~~~~d~v~~k~~~~ 270 (367)
T 3dg3_A 242 DESVPTPADVTREVLGGSATAISIKTART 270 (367)
T ss_dssp CTTCSSHHHHHHHHHHTSCSEEEECHHHH
T ss_pred cCCcCCHHHHHHHHHcCCCCEEEeehhhh
Confidence 99999999999999987 79999865444
No 306
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=91.42 E-value=2.8 Score=35.74 Aligned_cols=88 Identities=20% Similarity=0.164 Sum_probs=52.6
Q ss_pred HHHHHHHHHhc-CCcEEE--EeecC-HHH-HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE-ec
Q 019244 188 WKDVKWLQTIT-KLPILV--KGVLT-AED-ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL-DG 261 (344)
Q Consensus 188 ~~~i~~i~~~~-~~Pviv--K~v~~-~~~-a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via-~G 261 (344)
.+.++++++.+ +.|+++ | +.+ ++. ++.+.++|+|+|++....+ ...+..+.+..+.. .+++.+ .-
T Consensus 41 ~~~i~~l~~~~~~~~i~~~l~-~~di~~~~~~~a~~~Gad~v~vh~~~~------~~~~~~~~~~~~~~--g~~~gv~~~ 111 (207)
T 3ajx_A 41 LSVITAVKKAHPDKIVFADMK-TMDAGELEADIAFKAGADLVTVLGSAD------DSTIAGAVKAAQAH--NKGVVVDLI 111 (207)
T ss_dssp THHHHHHHHHSTTSEEEEEEE-ECSCHHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHHH--TCEEEEECT
T ss_pred HHHHHHHHHhCCCCeEEEEEE-ecCccHHHHHHHHhCCCCEEEEeccCC------hHHHHHHHHHHHHc--CCceEEEEe
Confidence 35789999887 789886 7 445 666 8899999999999854322 12232222222211 344422 22
Q ss_pred CCCCHHHHHHH-HHcCCCEEEEch
Q 019244 262 GVRRGTDVFKA-LALGASGIFIGR 284 (344)
Q Consensus 262 GIr~g~dv~ka-lalGAd~V~ig~ 284 (344)
...|+.+.++. ..+|+|.|.+..
T Consensus 112 s~~~p~~~~~~~~~~g~d~v~~~~ 135 (207)
T 3ajx_A 112 GIEDKATRAQEVRALGAKFVEMHA 135 (207)
T ss_dssp TCSSHHHHHHHHHHTTCSEEEEEC
T ss_pred cCCChHHHHHHHHHhCCCEEEEEe
Confidence 33366664444 467999995543
No 307
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=91.32 E-value=2.1 Score=38.99 Aligned_cols=97 Identities=18% Similarity=0.169 Sum_probs=64.8
Q ss_pred CCcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCC----CCCCchhhHHH-H---HHHHHHccCCCc
Q 019244 185 SLSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMA-L---EEVVKATQGRIP 256 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~----~~~~g~~~~~~-l---~~i~~~~~~~~~ 256 (344)
..+...++++++. +-|+++=.+-+.-.|+.+.++|+|.|-++...+. ..|.++-+++- + +.+++.. .+.|
T Consensus 15 ~~t~~~lr~~~~~-g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~-~~~~ 92 (275)
T 3vav_A 15 AVTVPKLQAMREA-GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQ-PRAL 92 (275)
T ss_dssp CCCHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTC-CSSE
T ss_pred CcCHHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcC-CCCC
Confidence 3466677776664 5688887788899999999999999966432221 12344445432 3 3333333 2589
Q ss_pred EEEe---cCCCCHHHHH----HHHHcCCCEEEEc
Q 019244 257 VFLD---GGVRRGTDVF----KALALGASGIFIG 283 (344)
Q Consensus 257 via~---GGIr~g~dv~----kalalGAd~V~ig 283 (344)
|++| ||..+..+++ +.+..||++|-+-
T Consensus 93 vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklE 126 (275)
T 3vav_A 93 IVADLPFGTYGTPADAFASAVKLMRAGAQMVKFE 126 (275)
T ss_dssp EEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 9997 4567888875 5667899999875
No 308
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=91.21 E-value=0.95 Score=43.21 Aligned_cols=87 Identities=13% Similarity=0.028 Sum_probs=66.3
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++|+.++.- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 180 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPIa 249 (391)
T 2qgy_A 180 SIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEEP--------VDGENISLLTEIKNTF--NMKVV 249 (391)
T ss_dssp HHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEECS--------SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeCC--------CChhhHHHHHHHHhhC--CCCEE
Confidence 446789999987 589998853 466654 55667898887521 1124567788887776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
+++.+.+..|+.+++..| +|.|++-
T Consensus 250 ~dE~~~~~~~~~~~i~~~~~d~v~ik 275 (391)
T 2qgy_A 250 TGEKQSGLVHFRELISRNAADIFNPD 275 (391)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred EcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 999999999999999987 7999884
No 309
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=90.95 E-value=0.53 Score=41.08 Aligned_cols=92 Identities=14% Similarity=0.187 Sum_probs=62.0
Q ss_pred CCCCcHHHHHHHHHhcCCcEEEEee--cCHHHHHHHHHcCCcEEEEccC----CCC--CCCCchhhHHHHHHHHHHccCC
Q 019244 183 DRSLSWKDVKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSNH----GAR--QLDYVPATIMALEEVVKATQGR 254 (344)
Q Consensus 183 ~~~~~~~~i~~i~~~~~~PvivK~v--~~~~~a~~~~~~G~d~I~v~~~----gG~--~~~~g~~~~~~l~~i~~~~~~~ 254 (344)
|++.+.+.++.+++ ++|+| |-+ .+.++...+.+..+|++.++.. ||+ .+||.. +..+. ..+
T Consensus 83 HG~e~~~~~~~l~~--~~~vi-ka~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~~-----l~~~~---~~~ 151 (205)
T 1nsj_A 83 HGEEPIELCRKIAE--RILVI-KAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDWSL-----ILPYR---DRF 151 (205)
T ss_dssp CSCCCHHHHHHHHT--TSEEE-EEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSCCCGGG-----TGGGG---GGS
T ss_pred CCCCCHHHHHHHhc--CCCEE-EEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCccCHHH-----HHhhh---cCC
Confidence 44556677777764 46766 543 3555655555556999999864 554 456642 22211 125
Q ss_pred CcEEEecCCCCHHHHHHHHH-cCCCEEEEchHH
Q 019244 255 IPVFLDGGVRRGTDVFKALA-LGASGIFIGRPV 286 (344)
Q Consensus 255 ~~via~GGIr~g~dv~kala-lGAd~V~ig~~~ 286 (344)
.|++.+||+. ++++.+++. +++.+|=+.+.+
T Consensus 152 ~p~~LAGGL~-peNV~~ai~~~~p~gVDvsSGv 183 (205)
T 1nsj_A 152 RYLVLSGGLN-PENVRSAIDVVRPFAVDVSSGV 183 (205)
T ss_dssp SCEEEESSCC-TTTHHHHHHHHCCSEEEESGGG
T ss_pred CcEEEECCCC-HHHHHHHHHhcCCCEEEECCce
Confidence 7999999995 889999987 699999999866
No 310
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=90.94 E-value=2.3 Score=47.39 Aligned_cols=120 Identities=14% Similarity=0.138 Sum_probs=84.9
Q ss_pred HHHHHHHHcCCcEEEEccCC-C--CCCCC-chhhHHHHHHHHHH-----ccCCCcEEE-ecCCCCHHHHHHHHHcCCCEE
Q 019244 211 EDARIAVQAGAAGIIVSNHG-A--RQLDY-VPATIMALEEVVKA-----TQGRIPVFL-DGGVRRGTDVFKALALGASGI 280 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~g-G--~~~~~-g~~~~~~l~~i~~~-----~~~~~~via-~GGIr~g~dv~kalalGAd~V 280 (344)
++|..+++.|+..|++|..+ + ...+. -.|.+-++..+..+ ++.++.|++ +|-+|+.-|++-.+-.||++|
T Consensus 585 ~~a~~av~~g~~iliLsDr~~~~~~~~~~~~ip~lla~~avh~~Li~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av 664 (1520)
T 1ofd_A 585 KTAIATVQAGAEILVLTDRPNGAILTENQSFIPPLLAVGAVHHHLIRAGLRLKASLIVDTAQCWSTHHFACLVGYGASAI 664 (1520)
T ss_dssp HHHHHHHHTTCSEEEEESSGGGCCCCTTEEECCHHHHHHHHHHHHHHTTCGGGCEEEEECSSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHCCCcEEEEcCCCCcCCCCCCccCcCHHHHHHHHHHHHHhcCCcccccEEEEeCCcChHHHHHHHHHcchhhh
Confidence 45788999999999999865 1 11121 23444444444333 234677777 789999999999999999999
Q ss_pred EEchHH--HHHh---------hhcC-------hHHHHHHHHHHHHHHHHHHHHhCCCCHhhhccccee
Q 019244 281 FIGRPV--VYSL---------AAEG-------EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 330 (344)
Q Consensus 281 ~ig~~~--l~~~---------~~~G-------~~~v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~ 330 (344)
.=--++ +..+ ...| ++.+.++++.+.++|...|..+|.++++.-++..+.
T Consensus 665 ~Pyla~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiF 732 (1520)
T 1ofd_A 665 CPYLALESVRQWWLDEKTQKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGISLLASYHGAQIF 732 (1520)
T ss_dssp ECHHHHHHHHHHHSCHHHHHHHTTSSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCCE
T ss_pred cHHHHHHHHHHHHhcccchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceee
Confidence 633222 1222 1112 357899999999999999999999999988776554
No 311
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.94 E-value=3.4 Score=35.28 Aligned_cols=88 Identities=17% Similarity=0.049 Sum_probs=55.9
Q ss_pred HHHHHHHHHh-cCCcEEEEee--cCHHH-HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEe-cC
Q 019244 188 WKDVKWLQTI-TKLPILVKGV--LTAED-ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD-GG 262 (344)
Q Consensus 188 ~~~i~~i~~~-~~~PvivK~v--~~~~~-a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~-GG 262 (344)
.+.++++|+. .++|+.+-.. ...+. ++.+.++|+|+|.+.... ....+..+.+..+.. .++++.+ -+
T Consensus 41 ~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~------~~~~~~~~~~~~~~~--g~~~~v~~~~ 112 (211)
T 3f4w_A 41 VNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVT------DVLTIQSCIRAAKEA--GKQVVVDMIC 112 (211)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS------CHHHHHHHHHHHHHH--TCEEEEECTT
T ss_pred HHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCC------ChhHHHHHHHHHHHc--CCeEEEEecC
Confidence 4679999988 4889865433 34555 899999999999994321 112323222222222 4666653 44
Q ss_pred CCCHHH-HHHHHHcCCCEEEEc
Q 019244 263 VRRGTD-VFKALALGASGIFIG 283 (344)
Q Consensus 263 Ir~g~d-v~kalalGAd~V~ig 283 (344)
..+..+ +.++..+|+|.|.+.
T Consensus 113 ~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 113 VDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp CSSHHHHHHHHHHHTCCEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEc
Confidence 566644 667778999998875
No 312
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=90.93 E-value=3 Score=38.57 Aligned_cols=114 Identities=17% Similarity=0.125 Sum_probs=77.7
Q ss_pred cCHHHHHHHHHcCCcEEEEcc---CCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCH-HHHHHHHHcCCCEEEEc
Q 019244 208 LTAEDARIAVQAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIG 283 (344)
Q Consensus 208 ~~~~~a~~~~~~G~d~I~v~~---~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g-~dv~kalalGAd~V~ig 283 (344)
.+|++++...+.|+|.+-++. ||-+....-.-.++.|.+|.+.++.++|+..=||=..+ +++.+++.+|..=|-++
T Consensus 172 T~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~ 251 (306)
T 3pm6_A 172 TTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVN 251 (306)
T ss_dssp CCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEES
T ss_pred CCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeC
Confidence 578999888899999988863 44331111112567899998887557999997765544 55789999999999999
Q ss_pred hHHHHHhhh--------cCh-HHHHHHHHHHHHHHHHHHHHhCCCCH
Q 019244 284 RPVVYSLAA--------EGE-KGVRRVLEMLREEFELAMALSGCRSL 321 (344)
Q Consensus 284 ~~~l~~~~~--------~G~-~~v~~~l~~l~~el~~~m~~~G~~~i 321 (344)
+-+..+... ... .-+....+.+++.++..|..+|+..-
T Consensus 252 Tdl~~a~~~~~r~~~~~~~~~~~~~~~~~a~~~~v~~~i~~fgs~gk 298 (306)
T 3pm6_A 252 RAVNNEYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGK 298 (306)
T ss_dssp HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTTG
T ss_pred hHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 977543211 011 11233345677788888999998643
No 313
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=90.80 E-value=8.7 Score=36.38 Aligned_cols=87 Identities=9% Similarity=-0.031 Sum_probs=61.4
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHH--cCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCc
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP 256 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~--~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~ 256 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+ .++++|-= ...+..++.+.++++.+. ++|
T Consensus 176 ~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEq--------P~~~~~~~~~~~l~~~~~-~iP 246 (389)
T 2oz8_A 176 DLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVED--------PILRHDHDGLRTLRHAVT-WTQ 246 (389)
T ss_dssp HHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEES--------CBCTTCHHHHHHHHHHCC-SSE
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEeC--------CCCCcCHHHHHHHHhhCC-CCC
Confidence 345688888877 477777643 455554 45667 66666531 011235677777777652 699
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 257 VFLDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 257 via~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
|++++.+ +..|+.+++..| +|.|++.
T Consensus 247 Ia~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 247 INSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp EEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred EEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 9999999 999999999988 7999996
No 314
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=90.73 E-value=0.28 Score=44.36 Aligned_cols=39 Identities=31% Similarity=0.393 Sum_probs=32.9
Q ss_pred HHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEcc
Q 019244 189 KDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~~ 228 (344)
+.++++|+.+++|+++... .++++++.+.+ ++|+++|.+
T Consensus 189 ~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS 228 (252)
T 3tha_A 189 DKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGT 228 (252)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECH
T ss_pred HHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECH
Confidence 4689999988999999875 68999998876 699999953
No 315
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=90.69 E-value=0.35 Score=43.03 Aligned_cols=41 Identities=24% Similarity=0.268 Sum_probs=36.4
Q ss_pred cHHHHHHHHHhc-CCcEEEEe-ecCHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTIT-KLPILVKG-VLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
+.+.++++++.+ ++|+++.+ +.++++++.+. .|||+|+|++
T Consensus 167 ~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 167 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 678899999999 79999987 57999999988 7999999954
No 316
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=90.69 E-value=2.6 Score=39.76 Aligned_cols=83 Identities=10% Similarity=0.070 Sum_probs=61.5
Q ss_pred HHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHH
Q 019244 189 KDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 268 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~d 268 (344)
+.+.+.++..+++++ -.+.+.+.+..+.+.|+|.+.|... -...+..|..+.+ ...|||.+-|..|-++
T Consensus 94 ~~L~~~~~~~Gi~~~-st~~d~~svd~l~~~~v~~~KI~S~-------~~~n~~LL~~va~---~gkPviLstGmat~~E 162 (349)
T 2wqp_A 94 IKLKEYVESKGMIFI-STLFSRAAALRLQRMDIPAYKIGSG-------ECNNYPLIKLVAS---FGKPIILSTGMNSIES 162 (349)
T ss_dssp HHHHHHHHHTTCEEE-EEECSHHHHHHHHHHTCSCEEECGG-------GTTCHHHHHHHHT---TCSCEEEECTTCCHHH
T ss_pred HHHHHHHHHhCCeEE-EeeCCHHHHHHHHhcCCCEEEECcc-------cccCHHHHHHHHh---cCCeEEEECCCCCHHH
Confidence 356666667788876 3578899999999999999999531 1234566776654 3789999999999999
Q ss_pred HHHHHH----cCCCEEEE
Q 019244 269 VFKALA----LGASGIFI 282 (344)
Q Consensus 269 v~kala----lGAd~V~i 282 (344)
+..|.. .|.+.+.+
T Consensus 163 i~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 163 IKKSVEIIREAGVPYALL 180 (349)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 887764 47766554
No 317
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=90.68 E-value=0.6 Score=44.52 Aligned_cols=91 Identities=15% Similarity=0.016 Sum_probs=67.7
Q ss_pred CCCcHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCC
Q 019244 184 RSLSWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI 255 (344)
Q Consensus 184 ~~~~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~ 255 (344)
..+ .+.++.+|+.+ ++|+.++.- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.+ ++
T Consensus 192 ~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~i 260 (388)
T 2nql_A 192 DGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFAEAP--------VWTEDIAGLEKVSKNT--DV 260 (388)
T ss_dssp TCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCEECC--------SCTTCHHHHHHHHTSC--CS
T ss_pred hHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECC--------CChhhHHHHHHHHhhC--CC
Confidence 344 67799999987 588998853 466554 55667888887421 1234567777777655 79
Q ss_pred cEEEecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 256 PVFLDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 256 ~via~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
||++++.+.+..|+.+++..| +|.|++-..
T Consensus 261 PI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 291 (388)
T 2nql_A 261 PIAVGEEWRTHWDMRARIERCRIAIVQPEMG 291 (388)
T ss_dssp CEEECTTCCSHHHHHHHHTTSCCSEECCCHH
T ss_pred CEEEeCCcCCHHHHHHHHHcCCCCEEEecCC
Confidence 999999999999999999987 899988543
No 318
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=90.55 E-value=1.1 Score=42.22 Aligned_cols=88 Identities=15% Similarity=0.169 Sum_probs=61.8
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHHH-H----HHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDAR-I----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a~-~----~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
.+.++.+|+.+ ++|+.+..- .+.+++. . +.+.|+++|-= ...+..++.+.++++.. ++||+
T Consensus 172 ~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI~ 241 (369)
T 2p8b_A 172 VKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNIDWIEQ--------PVIADDIDAMAHIRSKT--DLPLM 241 (369)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCEEC--------CBCTTCHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEC--------CCCcccHHHHHHHHHhC--CCCEE
Confidence 45678888877 477777743 3445554 3 33556666631 11233567777887765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+++.+.+..++.+++..| +|.|++-..
T Consensus 242 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 242 IDEGLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred eCCCCCCHHHHHHHHHhCCCCEEEeecc
Confidence 999999999999999987 899998653
No 319
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=90.51 E-value=2.4 Score=39.81 Aligned_cols=88 Identities=14% Similarity=0.084 Sum_probs=62.6
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHHH----HHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a~----~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .+.+++. .+.+.|+++|.= ...+..++.+.++++.. ++||++
T Consensus 170 ~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 239 (354)
T 3jva_A 170 IARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQIELVEQ--------PVKRRDLEGLKYVTSQV--NTTIMA 239 (354)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEEEC--------CSCTTCHHHHHHHHHHC--SSEEEE
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCChhhHHHHHHHHHhC--CCCEEE
Confidence 45688888877 477777653 4666653 444566666641 11123567777787766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
++.+.+..|+.+++..| +|.|++--.
T Consensus 240 dE~~~~~~~~~~~l~~~~~d~v~~k~~ 266 (354)
T 3jva_A 240 DESCFDAQDALELVKKGTVDVINIKLM 266 (354)
T ss_dssp STTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred cCCcCCHHHHHHHHHcCCCCEEEECch
Confidence 99999999999999986 799988743
No 320
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=90.35 E-value=1.3 Score=42.39 Aligned_cols=89 Identities=10% Similarity=-0.013 Sum_probs=67.4
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--c--CHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHH-HccCCC
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--L--TAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK-ATQGRI 255 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~--~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~-~~~~~~ 255 (344)
..+.++.+|+.+ ++++.++.- . +.++ ++.+.+.|+++|--- ..+..++.+.++++ .. ++
T Consensus 179 ~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~~--~i 248 (401)
T 2hzg_A 179 DADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLEEP--------FDAGALAAHAALAGRGA--RV 248 (401)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEECC--------SCTTCHHHHHHHHTTCC--SS
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEECC--------CCccCHHHHHHHHhhCC--CC
Confidence 446788999887 588988853 5 7766 456778899988421 12345677777766 44 79
Q ss_pred cEEEecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 256 PVFLDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 256 ~via~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
||++++.+.+..|+.+++..| +|.|++-..
T Consensus 249 PI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 279 (401)
T 2hzg_A 249 RIAGGEAAHNFHMAQHLMDYGRIGFIQIDCG 279 (401)
T ss_dssp EEEECTTCSSHHHHHHHHHHSCCSEEEECHH
T ss_pred CEEecCCcCCHHHHHHHHHCCCCCEEEeCcc
Confidence 999999999999999999987 899998643
No 321
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=90.08 E-value=3.3 Score=39.24 Aligned_cols=41 Identities=27% Similarity=0.406 Sum_probs=35.7
Q ss_pred cHHHHHHHHHhc--CCcEEEE-eecCHHHHHHHHHcCCcEEEEc
Q 019244 187 SWKDVKWLQTIT--KLPILVK-GVLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK-~v~~~~~a~~~~~~G~d~I~v~ 227 (344)
.|+.|.++++.+ ++||+.= ++.+.+++..++++|||+|.+.
T Consensus 284 a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 284 STQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 578899999998 7998764 4689999999999999999985
No 322
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=90.06 E-value=0.91 Score=41.14 Aligned_cols=42 Identities=12% Similarity=0.218 Sum_probs=35.5
Q ss_pred cHHHHHHHHH-hcC-CcEEEEe-ecCHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQT-ITK-LPILVKG-VLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~-~~~-~PvivK~-v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
+.+.++.+++ ..+ +|||+-+ +.+++++..+.+.|+|+|.|.+
T Consensus 164 ~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 164 TRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp THHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred CHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 4566899988 667 9999865 5799999999999999999854
No 323
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=89.99 E-value=1.2 Score=42.59 Aligned_cols=88 Identities=10% Similarity=-0.005 Sum_probs=66.1
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 193 ~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~iPIa 262 (393)
T 2og9_A 193 DIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIEEP--------LDAYDHEGHAALALQF--DTPIA 262 (393)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEECC--------SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEECC--------CCcccHHHHHHHHHhC--CCCEE
Confidence 456789999987 588988743 466664 45667788887421 1123567777887776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 263 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 289 (393)
T 2og9_A 263 TGEMLTSAAEHGDLIRHRAADYLMPDA 289 (393)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred eCCCcCCHHHHHHHHHCCCCCEEeeCc
Confidence 999999999999999988 79998854
No 324
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=89.99 E-value=1.8 Score=39.43 Aligned_cols=89 Identities=12% Similarity=0.148 Sum_probs=53.3
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+++|.+.|+-|-...-.. .-.+.+..+++.+.+ ||+--|=.+-.++++ |-.+|||++++-.|++
T Consensus 25 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 101 (286)
T 2r91_A 25 VKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAEAVASLPPYY 101 (286)
T ss_dssp HHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 45678899999999776443111111 123455555666543 555334334455443 3347999999999998
Q ss_pred HH-hhhcChHHHHHHHHHHHH
Q 019244 288 YS-LAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~-~~~~G~~~v~~~l~~l~~ 307 (344)
+. . .++++.++++.+.+
T Consensus 102 ~~~~---s~~~l~~~f~~va~ 119 (286)
T 2r91_A 102 FPRL---SERQIAKYFRDLCS 119 (286)
T ss_dssp STTC---CHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHH
Confidence 64 2 45666666655544
No 325
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=89.97 E-value=0.35 Score=43.21 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=36.3
Q ss_pred cHHHHHHHHHhc-CCcEEEEe-ecCHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTIT-KLPILVKG-VLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
..+.++++|+.+ ++|+++.+ +.++++++.+.+ |+|+++|++
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGS 215 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGD 215 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECT
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECC
Confidence 578899999998 89999987 479999999887 999999954
No 326
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=89.95 E-value=2.5 Score=38.76 Aligned_cols=45 Identities=20% Similarity=0.440 Sum_probs=39.1
Q ss_pred CCCcHHHHHHHHHhcCCcEEEEee--cCHHHHHHHHHcCCcEEEEcc
Q 019244 184 RSLSWKDVKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 184 ~~~~~~~i~~i~~~~~~PvivK~v--~~~~~a~~~~~~G~d~I~v~~ 228 (344)
+.++++.+++|++.+++|+++-+. .+.++.+++++.|+.-|-+++
T Consensus 191 p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~T 237 (288)
T 3q94_A 191 PNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVNT 237 (288)
T ss_dssp CCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTTEEEEEECH
T ss_pred CccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcCCeEEEECh
Confidence 456889999999999999999886 577899999999999998853
No 327
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=89.94 E-value=0.37 Score=43.19 Aligned_cols=41 Identities=24% Similarity=0.282 Sum_probs=36.5
Q ss_pred cHHHHHHHHHhc-CCcEEEEe-ecCHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTIT-KLPILVKG-VLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
..+.++++++.+ ++|+++.+ +.++++++.+.+ |||+|+|.+
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 577899999999 99999987 578999999999 999999953
No 328
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=89.75 E-value=3.1 Score=38.11 Aligned_cols=46 Identities=13% Similarity=0.393 Sum_probs=39.7
Q ss_pred CCCCcHHHHHHHHHhcCCcEEEEee--cCHHHHHHHHHcCCcEEEEcc
Q 019244 183 DRSLSWKDVKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 183 ~~~~~~~~i~~i~~~~~~PvivK~v--~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.+.++++.+++|++.+++|+++-+. .+.++.+++++.|+.-|-+++
T Consensus 186 ~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~T 233 (286)
T 1gvf_A 186 TPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVAT 233 (286)
T ss_dssp CCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTTEEEEEECH
T ss_pred CCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHCCCeEEEECh
Confidence 3567889999999999999999886 577899999999999998853
No 329
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=89.62 E-value=1.6 Score=40.57 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=58.2
Q ss_pred HHHHHHHHhcCCcEEEEeec-C---HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCC
Q 019244 189 KDVKWLQTITKLPILVKGVL-T---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 264 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~-~---~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr 264 (344)
+.++++++.++.|+.|.... + .+.++.+.+.|+|.|.+. +|. | ...+..+.+ ..++++. ++.
T Consensus 67 ~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~--~g~------p-~~~~~~l~~---~g~~v~~--~v~ 132 (326)
T 3bo9_A 67 KAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFG--AGN------P-TKYIRELKE---NGTKVIP--VVA 132 (326)
T ss_dssp HHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEE--SSC------C-HHHHHHHHH---TTCEEEE--EES
T ss_pred HHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEEC--CCC------c-HHHHHHHHH---cCCcEEE--EcC
Confidence 35777887777899888764 2 366788899999999873 221 2 234444433 2567775 688
Q ss_pred CHHHHHHHHHcCCCEEEE
Q 019244 265 RGTDVFKALALGASGIFI 282 (344)
Q Consensus 265 ~g~dv~kalalGAd~V~i 282 (344)
+..++.++...|||++.+
T Consensus 133 s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 133 SDSLARMVERAGADAVIA 150 (326)
T ss_dssp SHHHHHHHHHTTCSCEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 999999999999999988
No 330
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=89.48 E-value=1.8 Score=40.39 Aligned_cols=68 Identities=25% Similarity=0.239 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE---ecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL---DGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via---~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
+.++...++|||.|.+- ++++.+.+.++.+.+ ++|+++ .+|-....+..+.-.+|.+.|.++...+
T Consensus 193 ~Ra~Ay~eAGAd~i~~e---------~~~~~e~~~~i~~~l--~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ 261 (318)
T 1zlp_A 193 RRANLYKEAGADATFVE---------APANVDELKEVSAKT--KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAV 261 (318)
T ss_dssp HHHHHHHHTTCSEEEEC---------CCCSHHHHHHHHHHS--CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHH
T ss_pred HHHHHHHHcCCCEEEEc---------CCCCHHHHHHHHHhc--CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 45788999999999983 346677888888888 689854 3433223345566679999999998887
Q ss_pred HH
Q 019244 288 YS 289 (344)
Q Consensus 288 ~~ 289 (344)
.+
T Consensus 262 ra 263 (318)
T 1zlp_A 262 YA 263 (318)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 331
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=89.41 E-value=2.1 Score=39.89 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=57.6
Q ss_pred HHHHHHHHhcCCcEEEEeec-C---HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCC
Q 019244 189 KDVKWLQTITKLPILVKGVL-T---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 264 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~-~---~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr 264 (344)
+.++++++.++.|+.+.... + .+.++.+.++|+|+|.+.. |. + .+.+..+++ . .++|+.. +.
T Consensus 53 ~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~--g~-----p--~~~i~~l~~-~--g~~v~~~--v~ 118 (332)
T 2z6i_A 53 ANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGA--GN-----P--SKYMERFHE-A--GIIVIPV--VP 118 (332)
T ss_dssp HHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECS--SC-----G--GGTHHHHHH-T--TCEEEEE--ES
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECC--CC-----h--HHHHHHHHH-c--CCeEEEE--eC
Confidence 35777877778899888764 3 3558889999999998843 31 1 233444443 2 5788754 78
Q ss_pred CHHHHHHHHHcCCCEEEE
Q 019244 265 RGTDVFKALALGASGIFI 282 (344)
Q Consensus 265 ~g~dv~kalalGAd~V~i 282 (344)
+..++.++...|+|++.+
T Consensus 119 ~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 119 SVALAKRMEKIGADAVIA 136 (332)
T ss_dssp SHHHHHHHHHTTCSCEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 889988888999999998
No 332
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=89.30 E-value=0.38 Score=42.99 Aligned_cols=40 Identities=25% Similarity=0.229 Sum_probs=36.2
Q ss_pred cHHHHHHHHHhc-CCcEEEEe-ecCHHHHHHHHHcCCcEEEEc
Q 019244 187 SWKDVKWLQTIT-KLPILVKG-VLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~-v~~~~~a~~~~~~G~d~I~v~ 227 (344)
..+.++++++.+ ++|+++.+ +.++++++.+.+ |||+|+|.
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 578899999999 99999987 578999999999 99999995
No 333
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=89.24 E-value=1.7 Score=40.85 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=67.5
Q ss_pred cHHHHHHHHHhc--CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCC----------c----hhhHHHHHHHHHH
Q 019244 187 SWKDVKWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDY----------V----PATIMALEEVVKA 250 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~----------g----~~~~~~l~~i~~~ 250 (344)
+|+-++.++... ++++-+=.+.|...+..+.++|+..|-.. -||-.|| + .+.+..+.++.+.
T Consensus 163 T~eGi~A~~~L~~eGI~vN~TliFS~~Qa~~aAeAGa~~ISPF--VGRidD~~~~~~~~~~~~~~~~~~Gv~~v~~i~~~ 240 (345)
T 3tkf_A 163 TWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPF--VGRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKL 240 (345)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECCHHHHHHHHHTTCSEEEEB--SHHHHHHHHHHTTCSSCCCGGGCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEee--cchHHHHhhhccccccccccccCCHHHHHHHHHHH
Confidence 676554444332 89998888999999999999999988663 2332211 1 1334444455443
Q ss_pred ---ccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhhh
Q 019244 251 ---TQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 292 (344)
Q Consensus 251 ---~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~~ 292 (344)
.+.+..|++ -.+|+..++.. .+|+|.+-|.-.++..+..
T Consensus 241 yk~~g~~T~Vl~-ASfRn~~~V~a--LaG~d~vTipp~lL~~L~~ 282 (345)
T 3tkf_A 241 YKSHGFKTIVMG-ASFRNVEQVIA--LAGCDALTISPVLLEELKN 282 (345)
T ss_dssp HHHHTCCSEEEE-BCCSSHHHHHT--TTTSSEEEECHHHHHHHHT
T ss_pred HHHcCCCCEEEe-CCCCCHHHHHH--HhCCCEEECCHHHHHHHHh
Confidence 333454554 56999999983 4699999888888876653
No 334
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=89.08 E-value=9.1 Score=35.02 Aligned_cols=107 Identities=19% Similarity=0.226 Sum_probs=73.6
Q ss_pred cCHHHHHHHH-HcCCcEEEEcc---CCCCCCCCchh--hHHHHHHHHHHccCCCcEEEecCCCCH-HHHHHHHHcCCCEE
Q 019244 208 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPA--TIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGI 280 (344)
Q Consensus 208 ~~~~~a~~~~-~~G~d~I~v~~---~gG~~~~~g~~--~~~~l~~i~~~~~~~~~via~GGIr~g-~dv~kalalGAd~V 280 (344)
.+|++|+... +.|+|.+-++- ||-+ .+.| .++.|.+|++.+ ++|+..=||=..+ +++.|++.+|..=|
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y---~~~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~~Gv~Ki 233 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSVHGPY---KGEPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAISLGTSKI 233 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCBSSCC---SSSCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHHTTEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcccCCc---CCCCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHHcCCeEE
Confidence 5688887765 69999999873 5543 2223 567899999888 6999997754444 56889999999999
Q ss_pred EEchHHHHHhhh-------cC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 019244 281 FIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 319 (344)
Q Consensus 281 ~ig~~~l~~~~~-------~G-----~-~~v~~~l~~l~~el~~~m~~~G~~ 319 (344)
-+++-+.++... .. + .-+....+.+++.++..|..+|+.
T Consensus 234 Ni~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 285 (288)
T 3q94_A 234 NVNTENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSN 285 (288)
T ss_dssp EECHHHHHHHHHHHHHHHHHCSSCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEChHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999987654321 00 1 112333455677777788888764
No 335
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=88.98 E-value=2.2 Score=39.16 Aligned_cols=128 Identities=20% Similarity=0.284 Sum_probs=71.4
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHH----HHHHHHcCCcEEEEccCCCCCCCCc--hhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLDYV--PATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g--~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++++.+ +++||++|..+ ++++ ++.+.+.|.+-|++.-.| ...... ...+..++.+++.. ..+||+
T Consensus 123 n~~LLr~va~-~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg-~~y~~~~~~vdl~~i~~lk~~~-~~~pV~ 199 (285)
T 3sz8_A 123 QTDLVVAIAK-AGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERG-SSFGYDNLVVDMLGFRQMAETT-GGCPVI 199 (285)
T ss_dssp CHHHHHHHHH-TSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECC-EECSSSCEECCTTHHHHHHHHT-TSCCEE
T ss_pred CHHHHHHHHc-cCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCC-CCCCCCcCccCHHHHHHHHHhC-CCCCEE
Confidence 4556777664 69999999874 5544 566778898877775322 211111 12345666666654 148999
Q ss_pred Ee---------------cCCCCH-H-HHHHHHHcCCCEEEEchHHHH--HhhhcChHH-HHHHHHHHHHHHHHHHHHhCC
Q 019244 259 LD---------------GGVRRG-T-DVFKALALGASGIFIGRPVVY--SLAAEGEKG-VRRVLEMLREEFELAMALSGC 318 (344)
Q Consensus 259 a~---------------GGIr~g-~-dv~kalalGAd~V~ig~~~l~--~~~~~G~~~-v~~~l~~l~~el~~~m~~~G~ 318 (344)
.| ||-|.- . =...|+++|||.++|-..+-- ++ ++|... --+-++.|.++++..-..+|.
T Consensus 200 ~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al-~D~~~sl~p~el~~lv~~i~~i~~~lg~ 278 (285)
T 3sz8_A 200 FDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRAR-CDGPSALPLHQLEGLLSQMKAIDDLVKR 278 (285)
T ss_dssp EETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCS-CSSCCCEEGGGHHHHHHHHHHHHHHHTT
T ss_pred EeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccC-CchhhccCHHHHHHHHHHHHHHHHHhCC
Confidence 85 333222 2 234688999999998775421 11 133210 001245566666666666664
No 336
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=88.97 E-value=2.7 Score=39.98 Aligned_cols=88 Identities=15% Similarity=0.139 Sum_probs=66.1
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.+ ++++.+..- .+.++ ++.+.+.|+++|.= ...+..++.+.++++.. .+||+
T Consensus 180 d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa 249 (383)
T 3i4k_A 180 DTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELFEQ--------PTPADDLETLREITRRT--NVSVM 249 (383)
T ss_dssp HHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEES--------CSCTTCHHHHHHHHHHH--CCEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 345688999987 478888753 45655 45677889988852 11123466777787766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 250 ~dE~~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 250 ADESVWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp ESTTCSSHHHHHHHHHHTCCSEEEECT
T ss_pred ecCccCCHHHHHHHHHcCCCCEEEEcc
Confidence 999999999999999987 79999864
No 337
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=88.89 E-value=0.75 Score=41.19 Aligned_cols=78 Identities=17% Similarity=0.025 Sum_probs=51.6
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHH
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 269 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv 269 (344)
.+..+.+.+++|++|- +....+.+.|+|+|-+... +. + ..++++.++...-|-+ -+.|..++
T Consensus 87 ~l~~l~~~~~~~liIn-----d~~~lA~~~gAdGVHLg~~-----dl--~----~~~~r~~~~~~~~iG~--S~ht~~Ea 148 (243)
T 3o63_A 87 ILADAAHRYGALFAVN-----DRADIARAAGADVLHLGQR-----DL--P----VNVARQILAPDTLIGR--STHDPDQV 148 (243)
T ss_dssp HHHHHHHHTTCEEEEE-----SCHHHHHHHTCSEEEECTT-----SS--C----HHHHHHHSCTTCEEEE--EECSHHHH
T ss_pred HHHHHHHhhCCEEEEe-----CHHHHHHHhCCCEEEecCC-----cC--C----HHHHHHhhCCCCEEEE--eCCCHHHH
Confidence 4667777778998874 2234477889999987421 11 1 1233444432333333 37999999
Q ss_pred HHHHHcCCCEEEEchH
Q 019244 270 FKALALGASGIFIGRP 285 (344)
Q Consensus 270 ~kalalGAd~V~ig~~ 285 (344)
.++...|||.|++|..
T Consensus 149 ~~A~~~GaDyI~vgpv 164 (243)
T 3o63_A 149 AAAAAGDADYFCVGPC 164 (243)
T ss_dssp HHHHHSSCSEEEECCS
T ss_pred HHHhhCCCCEEEEcCc
Confidence 9999999999999863
No 338
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=88.79 E-value=1.4 Score=40.77 Aligned_cols=95 Identities=22% Similarity=0.263 Sum_probs=58.5
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHH----HHHHHHcCCcEEEEccCCCCCCCCch--hhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~--~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++++. .+++||++|..+ ++++ ++.+.+.|.+-|++.-.| ....... ..+..++.+++ . .+||+
T Consensus 144 n~~LLr~va-~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg-~~y~~~~~~vdl~~i~~lk~-~--~~PV~ 218 (298)
T 3fs2_A 144 QTDLLIAAA-RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERG-VSFGYNTLVSDMRALPIMAG-L--GAPVI 218 (298)
T ss_dssp CHHHHHHHH-HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECC-EECSSSCEECCTTHHHHHHT-T--TSCEE
T ss_pred CHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECC-CCCCCCCCccCHHHHHHHHH-c--CCcEE
Confidence 455677766 469999999874 5544 455667888777775322 2111101 23456666665 4 79999
Q ss_pred Ee---------------cCCCCHHH--HHHHHHcCCCEEEEchHH
Q 019244 259 LD---------------GGVRRGTD--VFKALALGASGIFIGRPV 286 (344)
Q Consensus 259 a~---------------GGIr~g~d--v~kalalGAd~V~ig~~~ 286 (344)
.| +|-|.-.- ...|+++|||+++|-..+
T Consensus 219 ~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~ 263 (298)
T 3fs2_A 219 FDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHE 263 (298)
T ss_dssp EEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred EcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecC
Confidence 95 44433222 346889999999987754
No 339
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=88.79 E-value=1.9 Score=41.19 Aligned_cols=88 Identities=11% Similarity=-0.013 Sum_probs=67.1
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.+ ++++.+..- .+.++| +.+.+.|+++|--- ..+..++.+.++++.. .+||+
T Consensus 177 d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPIa 246 (393)
T 4dwd_A 177 DIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDLGYSWFEEP--------VQHYHVGAMGEVAQRL--DITVS 246 (393)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHTTCSEEECC--------SCTTCHHHHHHHHHHC--SSEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEECC--------CCcccHHHHHHHHhhC--CCCEE
Confidence 345688999987 588988753 466654 56778899888521 1123567777887766 79999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
++..+.+..|+.+++..|+|.|++--
T Consensus 247 ~dE~~~~~~~~~~~i~~~~d~v~~k~ 272 (393)
T 4dwd_A 247 AGEQTYTLQALKDLILSGVRMVQPDI 272 (393)
T ss_dssp BCTTCCSHHHHHHHHHHTCCEECCCT
T ss_pred ecCCcCCHHHHHHHHHcCCCEEEeCc
Confidence 99999999999999999999998854
No 340
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1
Probab=88.33 E-value=2 Score=40.22 Aligned_cols=100 Identities=13% Similarity=0.211 Sum_probs=66.1
Q ss_pred cHHHHHHHHHh--cCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCC-------------chhhHHHHHHHHHH-
Q 019244 187 SWKDVKWLQTI--TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDY-------------VPATIMALEEVVKA- 250 (344)
Q Consensus 187 ~~~~i~~i~~~--~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~-------------g~~~~~~l~~i~~~- 250 (344)
+|+-++.++.. -++++-+=.+.|...+..+.++|+..|-.. -||-.|| +-+.+..+.++.+.
T Consensus 144 T~eGl~A~~~L~~~GI~~N~TliFS~~Qa~aaA~AGa~~ISPF--VgRidd~~~~~~~~~~~~~~~~~Gv~~v~~i~~~y 221 (329)
T 3m16_A 144 TWEGIQAAKILEAEGIHCNLTLLFHFAQAQACAEAGTTLISPF--VGRILDWYKANSGQSEYSASEDPGVVSVTEIYNFY 221 (329)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEB--HHHHHHHHHTTSSCCCCCTTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEee--hhHHHHHhhhcccccccccccCcHHHHHHHHHHHH
Confidence 67655444433 289998888999999999999999988663 1221111 12334444454443
Q ss_pred --ccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhh
Q 019244 251 --TQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 291 (344)
Q Consensus 251 --~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~ 291 (344)
.+.+.. +..-.+|+..++.. ..|+|.+-+.-.++..+.
T Consensus 222 ~~~g~~T~-v~~ASfRn~~~V~a--LaG~d~vTipp~~l~~l~ 261 (329)
T 3m16_A 222 KSHGFKTI-VMGASFRNTGEIEE--LAGCDRLTISPELLAQLE 261 (329)
T ss_dssp HHTTCCCE-EEEBCCSCHHHHHT--TTTSSEEEECHHHHHHHH
T ss_pred HHcCCCCE-EEeCCCCCHHHHHH--hhCCCEEECCHHHHHHHH
Confidence 333444 44456999999984 469999988888877664
No 341
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=88.12 E-value=0.58 Score=40.77 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=59.1
Q ss_pred CCCCcHHHHHHHHHhcCCcEEEEee-c-CHHHHHHHHHcCCcEEEEccC-CCC--CCCCchhhHHHHHHHHHHccCCCcE
Q 019244 183 DRSLSWKDVKWLQTITKLPILVKGV-L-TAEDARIAVQAGAAGIIVSNH-GAR--QLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 183 ~~~~~~~~i~~i~~~~~~PvivK~v-~-~~~~a~~~~~~G~d~I~v~~~-gG~--~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
|++.+.+.++.++. ++|+| |-+ . +.++. .+.+..+|++.++.. ||+ .+||.. +.++.. .+.|+
T Consensus 82 HG~e~~~~~~~l~~--~~~vi-ka~~v~~~~~l-~~~~~~~d~~LlD~~~gGtG~~fdW~~-----l~~~~~---~~~p~ 149 (203)
T 1v5x_A 82 HGEEPPEWAEAVGR--FYPVI-KAFPLEGPARP-EWADYPAQALLLDGKRPGSGEAYPRAW-----AKPLLA---TGRRV 149 (203)
T ss_dssp CSCCCHHHHHHHTT--TSCEE-EEEECSSSCCG-GGGGSSCSEEEEECSSTTSCCCCCGGG-----GHHHHH---TTSCE
T ss_pred CCCCCHHHHHHhcc--CCCEE-EEEEcCChHhh-hhhhcCCCEEEEcCCCCCCCCccCHHH-----HHhhhc---cCCcE
Confidence 44455667777732 57876 443 2 22233 344444899999863 443 466642 333111 25799
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEEchHH
Q 019244 258 FLDGGVRRGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalGAd~V~ig~~~ 286 (344)
+..||+. ++++.+++.+++.+|=+.+.+
T Consensus 150 ~LAGGL~-peNV~~ai~~~p~gVDvsSGv 177 (203)
T 1v5x_A 150 ILAGGIA-PENLEEVLALRPYALDLASGV 177 (203)
T ss_dssp EECSSCC-STTHHHHHHHCCSEEEESGGG
T ss_pred EEECCCC-HHHHHHHHhcCCCEEEeCCce
Confidence 9999995 889999997799999999876
No 342
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=87.99 E-value=2.5 Score=39.19 Aligned_cols=68 Identities=19% Similarity=0.119 Sum_probs=45.7
Q ss_pred HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE---ecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 212 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL---DGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 212 ~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via---~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
.++...++|+|.|.+- ++++.+.+.++.+.+. .+|+.+ .+|-.....+.+.-.+|.+.|..+...+.
T Consensus 183 Ra~ay~eAGAD~ifi~---------~~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~r 252 (307)
T 3lye_A 183 RLRAARDEGADVGLLE---------GFRSKEQAAAAVAALA-PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLA 252 (307)
T ss_dssp HHHHHHHTTCSEEEEC---------CCSCHHHHHHHHHHHT-TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHH
T ss_pred HHHHHHHCCCCEEEec---------CCCCHHHHHHHHHHcc-CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHH
Confidence 3566789999999883 3456677778877774 477765 34422222344556689999988887765
Q ss_pred H
Q 019244 289 S 289 (344)
Q Consensus 289 ~ 289 (344)
+
T Consensus 253 a 253 (307)
T 3lye_A 253 P 253 (307)
T ss_dssp H
T ss_pred H
Confidence 4
No 343
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=87.97 E-value=1.2 Score=40.96 Aligned_cols=95 Identities=20% Similarity=0.233 Sum_probs=58.1
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHH----HHHHHHcCC------cEEEEccCCCCCCCCch--hhHHHHHHHHHHcc
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAED----ARIAVQAGA------AGIIVSNHGARQLDYVP--ATIMALEEVVKATQ 252 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~----a~~~~~~G~------d~I~v~~~gG~~~~~g~--~~~~~l~~i~~~~~ 252 (344)
+.+.++++. .+++||++|..+ ++++ ++.+.+.|. +-|++. |-|....... ..+..++.+++ .
T Consensus 120 n~~LLr~~a-~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~-erg~~y~~~~~~vdl~~i~~lk~-~- 195 (288)
T 3tml_A 120 QTDFIHACA-RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMAC-ERGVSFGYNNLVSDMRSLAIMRE-T- 195 (288)
T ss_dssp CHHHHHHHH-TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEE-ECCEECSSSCEECCHHHHHHGGG-G-
T ss_pred CHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEE-eCCCCCCCCcCcCCHHHHHHHHh-c-
Confidence 445577765 469999999874 5544 455666776 556654 2232221111 24666776655 4
Q ss_pred CCCcEEEe---------------cCCCCHH--HHHHHHHcCCCEEEEchHH
Q 019244 253 GRIPVFLD---------------GGVRRGT--DVFKALALGASGIFIGRPV 286 (344)
Q Consensus 253 ~~~~via~---------------GGIr~g~--dv~kalalGAd~V~ig~~~ 286 (344)
.+||+.| ||-|.-. =...|+++|||+++|-+.+
T Consensus 196 -~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~ 245 (288)
T 3tml_A 196 -NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHP 245 (288)
T ss_dssp -SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEES
T ss_pred -CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeecc
Confidence 6999985 4544332 2357889999999998754
No 344
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=87.96 E-value=4.5 Score=38.14 Aligned_cols=86 Identities=17% Similarity=0.106 Sum_probs=60.7
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHHHHHHH---cCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDARIAVQ---AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a~~~~~---~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
..+.++.+|+.+ ++|+.++.- .+.+++....+ .|+ +|- +. -+ .++.+.++++.. ++||++
T Consensus 176 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~i-~iE-------qP--~~-d~~~~~~l~~~~--~iPI~~ 242 (378)
T 2qdd_A 176 DIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVRARD-WIE-------QP--CQ-TLDQCAHVARRV--ANPIML 242 (378)
T ss_dssp HHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCCCCC-EEE-------CC--SS-SHHHHHHHHTTC--CSCEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhCCCc-EEE-------cC--CC-CHHHHHHHHHhC--CCCEEE
Confidence 345688888877 478887753 46676644332 455 442 10 11 667777777655 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
++.+.+..|+.+++..| +|.|++-..
T Consensus 243 dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (378)
T 2qdd_A 243 DECLHEFSDHLAAWSRGACEGVKIKPN 269 (378)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCcCCHHHHHHHHHhCCCCEEEeccc
Confidence 99999999999999877 899998654
No 345
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=87.93 E-value=5.5 Score=37.82 Aligned_cols=87 Identities=14% Similarity=0.066 Sum_probs=63.0
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .++++| +.+.+.|+++|-= ...+..++.+.++++.. .+||.+
T Consensus 200 ~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~ 269 (383)
T 3toy_A 200 EAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTWIEE--------PVPQENLSGHAAVRERS--EIPIQA 269 (383)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcchHHHHHHHHhhc--CCCEEe
Confidence 45688888876 477777643 456654 4566778887741 11123567777887766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+..+.+..|+.+++..| +|.|++--
T Consensus 270 dE~~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 270 GENWWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp CTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999987 68887753
No 346
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae}
Probab=87.89 E-value=3.4 Score=38.78 Aligned_cols=100 Identities=10% Similarity=0.155 Sum_probs=68.3
Q ss_pred cHHHHHHHHHh-c--CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCC------------chhhHHHHHHHHH--
Q 019244 187 SWKDVKWLQTI-T--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDY------------VPATIMALEEVVK-- 249 (344)
Q Consensus 187 ~~~~i~~i~~~-~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~------------g~~~~~~l~~i~~-- 249 (344)
+|+-|+.++.. . ++++-+=.+.|.+.+..+.++|+..|-.. -||-.|| +-+.+..+.++.+
T Consensus 148 T~eGi~A~~~L~~~eGI~vNvTLiFS~~Qa~aaa~AGa~~iSpF--VgRidd~~~~~~~~~~~~~~d~Gv~~v~~iy~~y 225 (339)
T 3cq0_A 148 TWEGIQAARELEVKHGIHCNMTLLFSFTQAVACAEANVTLISPF--VGRIMDFYKALSGKDYTAETDPGVLSVKKIYSYY 225 (339)
T ss_dssp SHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHTTCSEEEEB--SHHHHHHHHHC---CCCTTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCceeEeeeCCHHHHHHHHHcCCcEEEec--ccHHHHHhhhhcccccccccChHHHHHHHHHHHH
Confidence 67755555444 2 89998888999999999999999987653 3442222 1223344444443
Q ss_pred -HccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhh
Q 019244 250 -ATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 291 (344)
Q Consensus 250 -~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~ 291 (344)
....+..|++ -.+|+..+|.. ..|+|.+-+.-.++..+.
T Consensus 226 ~~~~~~T~v~~-AS~r~~~~V~~--LaG~d~vTipp~~l~~l~ 265 (339)
T 3cq0_A 226 KRHGYATEVMA-ASFRNLDELKA--LAGIDNMTLPLNLLEQLY 265 (339)
T ss_dssp HHHTCCCEEEE-BCCCSHHHHHH--HTTSSEEEEEHHHHHHHH
T ss_pred HHcCCCcEEEe-cCCCCHHHHHH--hhCCCEEECCHHHHHHHH
Confidence 3333444444 56999999997 579999988888887765
No 347
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=87.84 E-value=10 Score=34.64 Aligned_cols=107 Identities=18% Similarity=0.309 Sum_probs=74.2
Q ss_pred cCHHHHHHHH-HcCCcEEEEcc---CCCCCCCCchh--hHHHHHHHHHHccCCCcEEEecCCCC-HHHHHHHHHcCCCEE
Q 019244 208 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPA--TIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGI 280 (344)
Q Consensus 208 ~~~~~a~~~~-~~G~d~I~v~~---~gG~~~~~g~~--~~~~l~~i~~~~~~~~~via~GGIr~-g~dv~kalalGAd~V 280 (344)
.+|++|+... +.|+|.+-++- ||-+. +.| .++.|.+|++.+ ++|+..=||=.. -+++.|++.+|..=|
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~---~~p~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~i~~ai~~Gv~Ki 229 (286)
T 1gvf_A 155 TDPQEAKRFVELTGVDSLAVAIGTAHGLYS---KTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIELGVTKV 229 (286)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSCCS---SCCCCCHHHHHHHHHHC--CSCEEECCCTTCCHHHHHHHHHTTEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEeecCccccCcC---CCCccCHHHHHHHHHhc--CCCEEEECCCCCCHHHHHHHHHCCCeEE
Confidence 5788887766 79999999873 55332 333 467899999887 699999775443 456888999999999
Q ss_pred EEchHHHHHhhh-------cC-----hH-HHHHHHHHHHHHHHHHHHHhCCC
Q 019244 281 FIGRPVVYSLAA-------EG-----EK-GVRRVLEMLREEFELAMALSGCR 319 (344)
Q Consensus 281 ~ig~~~l~~~~~-------~G-----~~-~v~~~l~~l~~el~~~m~~~G~~ 319 (344)
-+++-+.++... .. +. -+....+.+++.++..|..+|+.
T Consensus 230 Ni~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 281 (286)
T 1gvf_A 230 NVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSA 281 (286)
T ss_dssp EECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEChHHHHHHHHHHHHHHHhCcccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999977554221 11 11 12333456777778888888764
No 348
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=87.84 E-value=5.5 Score=36.67 Aligned_cols=92 Identities=21% Similarity=0.302 Sum_probs=61.1
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-C-C---CCCCchhhHH----HHHHHHHHccCCCcEEEe
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A-R---QLDYVPATIM----ALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G-~---~~~~g~~~~~----~l~~i~~~~~~~~~via~ 260 (344)
.++++.+. +-|+++=++.+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++ .+..|.+.. ++||++|
T Consensus 13 ~lr~l~~~-~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~--~~PviaD 89 (298)
T 3eoo_A 13 KFRAAVAA-EQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT--NLPLLVD 89 (298)
T ss_dssp HHHHHHHH-SSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC--CSCEEEE
T ss_pred HHHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc--CCeEEEE
Confidence 45555443 56888888889999999999999999998621 1 0 1344444433 344444444 7999997
Q ss_pred c--CCCCHHHHH----HHHHcCCCEEEEch
Q 019244 261 G--GVRRGTDVF----KALALGASGIFIGR 284 (344)
Q Consensus 261 G--GIr~g~dv~----kalalGAd~V~ig~ 284 (344)
. |..++.++. +....||.+|-+--
T Consensus 90 ~d~Gyg~~~~v~~~v~~l~~aGaagv~iED 119 (298)
T 3eoo_A 90 IDTGWGGAFNIARTIRSFIKAGVGAVHLED 119 (298)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCeEEEECC
Confidence 6 554655554 34458999997753
No 349
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=87.81 E-value=10 Score=35.23 Aligned_cols=108 Identities=19% Similarity=0.271 Sum_probs=75.1
Q ss_pred cCHHHHHHHH-HcCCcEEEEcc---CCCCCCCCchhh----HHHHHHHHHHccCCCcEEEec------------------
Q 019244 208 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPAT----IMALEEVVKATQGRIPVFLDG------------------ 261 (344)
Q Consensus 208 ~~~~~a~~~~-~~G~d~I~v~~---~gG~~~~~g~~~----~~~l~~i~~~~~~~~~via~G------------------ 261 (344)
.+|++|.... +.|+|.+-++. ||-+... +.|. ++.|.+|.+.+ ++|+..=|
T Consensus 153 TdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~-~~p~~~L~~~~L~~I~~~~--~vpLVlHGgSsvp~~~~~~~~~~gg~ 229 (323)
T 2isw_A 153 TEPQDAKKFVELTGVDALAVAIGTSHGAYKFK-SESDIRLAIDRVKTISDLT--GIPLVMHGSSSVPKDVKDMINKYGGK 229 (323)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCC-C----CCCCHHHHHHHHHH--CSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCC-CCcccccCHHHHHHHHHHh--CCCeEEECCCCCCHHHHHHHHHhccc
Confidence 5788887765 79999999873 5543221 3344 57899998888 69999988
Q ss_pred -----CCCCHHHHHHHHHcCCCEEEEchHHHHHhhh-------cC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 019244 262 -----GVRRGTDVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 319 (344)
Q Consensus 262 -----GIr~g~dv~kalalGAd~V~ig~~~l~~~~~-------~G-----~-~~v~~~l~~l~~el~~~m~~~G~~ 319 (344)
|+. -+++.|++.+|..=|-+++-+-++... .. + .-+....+.+++.++..|..+|+.
T Consensus 230 ~~~~~Gvp-~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 304 (323)
T 2isw_A 230 MPDAVGVP-IESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSA 304 (323)
T ss_dssp CTTCBCCC-HHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cccCCCCC-HHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 544 578999999999999999977554321 11 1 113334466788888888888874
No 350
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=87.70 E-value=2.7 Score=39.61 Aligned_cols=85 Identities=21% Similarity=0.135 Sum_probs=59.4
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHH----HHH-HHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDA----RIA-VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~-~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
.+.++.+|+.+ ++++.++.- .+.+++ +.+ .+.|+ +|-- . .+.++.+.++++.+ ++||+
T Consensus 177 ~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE~---P-------~~~~~~~~~l~~~~--~iPI~ 243 (371)
T 2ps2_A 177 AKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF-ALEA---P-------CATWRECISLRRKT--DIPII 243 (371)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC-EEEC---C-------BSSHHHHHHHHTTC--CSCEE
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC-cCcC---C-------cCCHHHHHHHHhhC--CCCEE
Confidence 45677788776 477777643 456654 334 45566 5531 0 11566777776655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+++.+.+..|+.+++..| +|.|++--.
T Consensus 244 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (371)
T 2ps2_A 244 YDELATNEMSIVKILADDAAEGIDLKIS 271 (371)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEEEHH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEechh
Confidence 999999999999999987 799998643
No 351
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=87.53 E-value=1.9 Score=40.75 Aligned_cols=85 Identities=11% Similarity=-0.011 Sum_probs=63.1
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++|+.++.- .+.+++ +.+.+.|+ +|-- . + + .++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE~---P---~---~-~~~~~~~l~~~~--~iPI~ 241 (379)
T 2rdx_A 175 DIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILEQ---P---C---R-SYEECQQVRRVA--DQPMK 241 (379)
T ss_dssp HHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEEC---C---S---S-SHHHHHHHHTTC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEeC---C---c---C-CHHHHHHHHhhC--CCCEE
Confidence 346789999988 488988853 466665 44556677 6631 0 1 1 667777777655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++-.
T Consensus 242 ~de~i~~~~~~~~~i~~~~~d~v~ik~ 268 (379)
T 2rdx_A 242 LDECVTGLHMAQRIVADRGAEICCLKI 268 (379)
T ss_dssp ECTTCCSHHHHHHHHHHTCCSEEEEET
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 999999999999999987 89999854
No 352
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=87.47 E-value=2.5 Score=39.71 Aligned_cols=42 Identities=19% Similarity=0.317 Sum_probs=36.4
Q ss_pred CCcHHHHHHHHHhc-CCcEEEEe-ecCHHHHHHHHHcCCcEEEEc
Q 019244 185 SLSWKDVKWLQTIT-KLPILVKG-VLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 185 ~~~~~~i~~i~~~~-~~PvivK~-v~~~~~a~~~~~~G~d~I~v~ 227 (344)
...|+.++++++.+ ++||++-+ +.+++++..+++ |+|+|.++
T Consensus 182 ~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 182 PLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp CCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEEC
T ss_pred cccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEEC
Confidence 35799999999998 89998866 479999999998 99999884
No 353
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=87.34 E-value=3.5 Score=37.96 Aligned_cols=68 Identities=16% Similarity=0.074 Sum_probs=48.6
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~---GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
+.++...++|||.|.+- ++.+.+.+.++.+.+ ++|+++. +|-.....+.+.-.+|.+.|.++...+
T Consensus 175 ~Ra~ay~~AGAD~if~~---------~~~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ 243 (298)
T 3eoo_A 175 ERAIAYVEAGADMIFPE---------AMKTLDDYRRFKEAV--KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAY 243 (298)
T ss_dssp HHHHHHHHTTCSEEEEC---------CCCSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHH
T ss_pred HHHHhhHhcCCCEEEeC---------CCCCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 34677889999999883 245677788888877 4888663 442222345566679999999998877
Q ss_pred HH
Q 019244 288 YS 289 (344)
Q Consensus 288 ~~ 289 (344)
.+
T Consensus 244 ra 245 (298)
T 3eoo_A 244 RA 245 (298)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 354
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=87.30 E-value=2.2 Score=40.69 Aligned_cols=88 Identities=11% Similarity=0.021 Sum_probs=65.5
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 206 d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPIa 275 (398)
T 2pp0_A 206 DIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEEP--------LDAYDIEGHAQLAAAL--DTPIA 275 (398)
T ss_dssp HHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTCSCEECC--------SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCceeeCC--------CChhhHHHHHHHHhhC--CCCEE
Confidence 346789999987 588888753 466654 45667788877421 1123567778887776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 276 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 302 (398)
T 2pp0_A 276 TGEMLTSFREHEQLILGNASDFVQPDA 302 (398)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999987 79888753
No 355
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=87.28 E-value=0.54 Score=41.59 Aligned_cols=70 Identities=16% Similarity=0.242 Sum_probs=52.4
Q ss_pred cCHHHHHHHHHcCCcEEEEccC---CCCCCCCchhhHHHHHHHH---HHccCCCcEEE-----ecCCCCH--------HH
Q 019244 208 LTAEDARIAVQAGAAGIIVSNH---GARQLDYVPATIMALEEVV---KATQGRIPVFL-----DGGVRRG--------TD 268 (344)
Q Consensus 208 ~~~~~a~~~~~~G~d~I~v~~~---gG~~~~~g~~~~~~l~~i~---~~~~~~~~via-----~GGIr~g--------~d 268 (344)
.+.+++..+.+.|||-|-+... ||. -|++..+..++ +.+ ++||.+ .|++... .|
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L~~GGl-----TPS~g~i~~~~~~~~~~--~ipV~vMIRPR~GdF~Ys~~E~~~M~~D 81 (224)
T 2bdq_A 9 ENLTDLTRLDKAIISRVELCDNLAVGGT-----TPSYGVIKEANQYLHEK--GISVAVMIRPRGGNFVYNDLELRIMEED 81 (224)
T ss_dssp ETTTTGGGCCTTTCCEEEEEBCGGGTCB-----CCCHHHHHHHHHHHHHT--TCEEEEECCSSSSCSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCcccCCc-----CCCHHHHHHHHHhhhhc--CCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 6889999999999999998753 453 35556666665 555 688877 4555554 37
Q ss_pred HHHHHHcCCCEEEEch
Q 019244 269 VFKALALGASGIFIGR 284 (344)
Q Consensus 269 v~kalalGAd~V~ig~ 284 (344)
+..+..+|||.|.+|-
T Consensus 82 i~~~~~~GadGvV~G~ 97 (224)
T 2bdq_A 82 ILRAVELESDALVLGI 97 (224)
T ss_dssp HHHHHHTTCSEEEECC
T ss_pred HHHHHHcCCCEEEEee
Confidence 7788889999999993
No 356
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=87.19 E-value=5.4 Score=37.97 Aligned_cols=89 Identities=12% Similarity=0.086 Sum_probs=64.0
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .++++| +.+.+.|+++|-= ...+..++.+.++++.. .+||.+
T Consensus 206 ~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 275 (390)
T 3ugv_A 206 IETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIEE--------PVVYDNFDGYAQLRHDL--KTPLMI 275 (390)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHHhc--CCCEEe
Confidence 45688888887 477887753 466664 4455677777742 11123567777887766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchHH
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGRPV 286 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~~~ 286 (344)
+..+.+..|+.+++..| +|.|++--..
T Consensus 276 dE~~~~~~~~~~~i~~~a~d~v~ik~~~ 303 (390)
T 3ugv_A 276 GENFYGPREMHQALQAGACDLVMPDFMR 303 (390)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCBHHH
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 99999999999999987 7888776443
No 357
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=87.17 E-value=2.2 Score=41.07 Aligned_cols=90 Identities=7% Similarity=-0.024 Sum_probs=67.5
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.+ ++++.+..- .++++| +.+.+.|+++|--- ..+..++.+.++++.. .+||+
T Consensus 216 die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEeP--------~~~~d~~~~~~l~~~~--~iPIa 285 (412)
T 3stp_A 216 NLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEPRWLEEP--------VIADDVAGYAELNAMN--IVPIS 285 (412)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CCcccHHHHHHHHhCC--CCCEE
Confidence 445688999987 578888753 466664 45667888888521 1123567788887765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchHH
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGRPV 286 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~~~ 286 (344)
+++.+.+..|+.+++..| +|.|++--..
T Consensus 286 ~dE~~~~~~~~~~li~~~a~D~v~ik~~~ 314 (412)
T 3stp_A 286 GGEHEFSVIGCAELINRKAVSVLQYDTNR 314 (412)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEecChhh
Confidence 999999999999999987 7999886544
No 358
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=87.07 E-value=3.4 Score=37.82 Aligned_cols=89 Identities=19% Similarity=0.255 Sum_probs=51.1
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHH----HcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL----ALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kal----alGAd~V~ig~~~l 287 (344)
++.+++.|+|+|.+.|+-|-...-.. .-.+.+..+++.+.+ ||+--|=.+-.++++.. .+|||++++-.|++
T Consensus 26 v~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g---viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 102 (293)
T 1w3i_A 26 AENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK---IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYY 102 (293)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC---EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC---EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 34577899999999775442111111 122344444444433 55533444455555433 36999999999988
Q ss_pred HH-hhhcChHHHHHHHHHHHH
Q 019244 288 YS-LAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~-~~~~G~~~v~~~l~~l~~ 307 (344)
+. . .++++.++++.+.+
T Consensus 103 ~~~~---s~~~l~~~f~~va~ 120 (293)
T 1w3i_A 103 YPRM---SEKHLVKYFKTLCE 120 (293)
T ss_dssp CSSC---CHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHh
Confidence 64 2 45666666655543
No 359
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=87.06 E-value=2 Score=39.43 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=49.6
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEEchHHHHH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVYS 289 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~ig~~~l~~ 289 (344)
+.++...++|||.|.+-+ ++++.+.+.++.+.+..++|+++.-.-....++.+.-.+| .+.|.++...+.+
T Consensus 170 ~Ra~ay~eAGAd~i~~e~--------~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~ra 241 (290)
T 2hjp_A 170 RRGQAYEEAGADAILIHS--------RQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRA 241 (290)
T ss_dssp HHHHHHHHTTCSEEEECC--------CCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHH
T ss_pred HHHHHHHHcCCcEEEeCC--------CCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHH
Confidence 456788999999999832 1455567788888885559999852100122444556699 9999999887765
No 360
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=87.03 E-value=5.1 Score=37.86 Aligned_cols=91 Identities=21% Similarity=0.210 Sum_probs=61.1
Q ss_pred HHHHHHhcCCcEEEEee--c----CHHHHHHHHHcCCcEEEEccC----CCCC------------------CC-------
Q 019244 191 VKWLQTITKLPILVKGV--L----TAEDARIAVQAGAAGIIVSNH----GARQ------------------LD------- 235 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v--~----~~~~a~~~~~~G~d~I~v~~~----gG~~------------------~~------- 235 (344)
++++.+..+.|.++..- . +.+.++++.++|+++|.+.-. |++. .+
T Consensus 114 ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~ 193 (370)
T 1gox_A 114 VEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMD 193 (370)
T ss_dssp HHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---
T ss_pred HHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccc
Confidence 45555554567888752 2 235678889999999988632 2110 00
Q ss_pred --Cc-------------hhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 236 --YV-------------PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 236 --~g-------------~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
.+ ..+++.+.++++.. ++||+. +|+.+.+++.++..+|||+|.++.
T Consensus 194 ~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~--~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 194 KANDSGLSSYVAGQIDRSLSWKDVAWLQTIT--SLPILV-KGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp ------HHHHHHHTBCTTCCHHHHHHHHHHC--CSCEEE-ECCCSHHHHHHHHHTTCSEEEECC
T ss_pred cccCccHHHHHHhhcCccchHHHHHHHHHHh--CCCEEE-EecCCHHHHHHHHHcCCCEEEECC
Confidence 00 11345566676665 789986 778999999999999999999954
No 361
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=86.98 E-value=4.8 Score=37.92 Aligned_cols=87 Identities=11% Similarity=0.155 Sum_probs=61.9
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .+.++| +.+.+.|+++|-= ...+..++.+.++++.. .+||.+
T Consensus 171 ~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa~ 240 (368)
T 3q45_A 171 VERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQHCEE--------PVSRNLYTALPKIRQAC--RIPIMA 240 (368)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCSCEEC--------CBCGGGGGGHHHHHHTC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCCEEEC--------CCChhHHHHHHHHHhhC--CCCEEE
Confidence 45688888887 477777642 456654 4556678877742 11123455667777655 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+..+.+..|+.+++..| +|.|++--
T Consensus 241 dE~~~~~~~~~~~~~~~~~d~v~~k~ 266 (368)
T 3q45_A 241 DESCCNSFDAERLIQIQACDSFNLKL 266 (368)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred cCCcCCHHHHHHHHHcCCCCeEEech
Confidence 99999999999999986 78888764
No 362
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=86.85 E-value=6.3 Score=37.17 Aligned_cols=86 Identities=9% Similarity=0.031 Sum_probs=60.9
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHHH----HHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a~----~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ +.++.+..- .+.+++. .+.+.|+++|-= ...+..++.+.++++.. .+||++
T Consensus 184 ~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 253 (372)
T 3tj4_A 184 IARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEE--------PLWYDDVTSHARLARNT--SIPIAL 253 (372)
T ss_dssp HHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEEES--------CSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEEEC--------CCCchhHHHHHHHHhhc--CCCEEe
Confidence 45688888887 477877643 4666654 344556665531 01123567777777766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
+..+.+..|+.+++..| +|.|++-
T Consensus 254 dE~~~~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 254 GEQLYTVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred CCCccCHHHHHHHHHcCCCCEEEeC
Confidence 99999999999999987 6888874
No 363
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=86.78 E-value=3.7 Score=37.77 Aligned_cols=91 Identities=24% Similarity=0.374 Sum_probs=60.7
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-CC----CCCCchhhHH----HHHHHHHHccCCCcEEEe
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-AR----QLDYVPATIM----ALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G~----~~~~g~~~~~----~l~~i~~~~~~~~~via~ 260 (344)
.++++.+. +-|+.+=++.+.-.|+.+.++|+|+|.+++.+ +. ..|.++-+++ .+..|.+.. ++||++|
T Consensus 8 ~lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~--~~PviaD 84 (295)
T 1xg4_A 8 AFRAALTK-ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC--SLPLLVD 84 (295)
T ss_dssp HHHHHHHH-SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC--CSCEEEE
T ss_pred HHHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC--CCCEEec
Confidence 34444443 56888888889999999999999999998652 11 1234444443 334444444 6899998
Q ss_pred c--CCC-CHHHHH----HHHHcCCCEEEEc
Q 019244 261 G--GVR-RGTDVF----KALALGASGIFIG 283 (344)
Q Consensus 261 G--GIr-~g~dv~----kalalGAd~V~ig 283 (344)
. |.. ++.++. +.+..||++|-+-
T Consensus 85 ~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iE 114 (295)
T 1xg4_A 85 ADIGFGSSAFNVARTVKSMIKAGAAGLHIE 114 (295)
T ss_dssp CTTCSSSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 7 554 555554 3556899999873
No 364
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=86.76 E-value=3.5 Score=37.50 Aligned_cols=64 Identities=22% Similarity=0.346 Sum_probs=47.0
Q ss_pred HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEec--CCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 212 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG--GVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 212 ~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~G--GIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
.++...++|||.|.+- ++++.+.+.++.+.+ ++|+-... +.-+ +.+.-.+|.+.|..+...+.+
T Consensus 173 Ra~ay~eAGAd~i~~e---------~~~~~~~~~~i~~~~--~~P~n~~~~~~~~~---~~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 173 RGQAYADAGADGIFVP---------LALQSQDIRALADAL--RVPLNVMAFPGSPV---PRALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp HHHHHHHTTCSEEECT---------TCCCHHHHHHHHHHC--SSCEEEECCTTSCC---HHHHHHTTCSEEECTTHHHHH
T ss_pred HHHHHHHCCCCEEEEC---------CCCCHHHHHHHHHhc--CCCEEEecCCCCCC---HHHHHHcCCcEEEEChHHHHH
Confidence 3677889999999883 346677888888887 57776553 3333 445667999999999887765
No 365
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=86.76 E-value=8.3 Score=35.30 Aligned_cols=92 Identities=23% Similarity=0.167 Sum_probs=59.3
Q ss_pred HHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-C--C-CCCCchhhHHH-HHHHHHHcc-CCCcEEEec--C
Q 019244 191 VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A--R-QLDYVPATIMA-LEEVVKATQ-GRIPVFLDG--G 262 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G--~-~~~~g~~~~~~-l~~i~~~~~-~~~~via~G--G 262 (344)
++++.+. +-|+.+=++.+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++. +..++...+ -++||++|. |
T Consensus 7 lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~G 85 (290)
T 2hjp_A 7 LRAALDS-GRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTG 85 (290)
T ss_dssp HHHHHHH-CCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTT
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4444432 56888888889999999999999999998631 1 1 12334444433 322222222 279999976 5
Q ss_pred CCCHHHHH----HHHHcCCCEEEEc
Q 019244 263 VRRGTDVF----KALALGASGIFIG 283 (344)
Q Consensus 263 Ir~g~dv~----kalalGAd~V~ig 283 (344)
..+..++. +.+..||.+|-+-
T Consensus 86 yg~~~~~~~~v~~l~~aGa~gv~iE 110 (290)
T 2hjp_A 86 FGNAVNVHYVVPQYEAAGASAIVME 110 (290)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEc
Confidence 55666554 4556899999874
No 366
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=86.70 E-value=3.3 Score=38.06 Aligned_cols=91 Identities=24% Similarity=0.236 Sum_probs=56.9
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-CC---CCCCchhhHH----HHHHHHHHccCCCcEEEec
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-AR---QLDYVPATIM----ALEEVVKATQGRIPVFLDG 261 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G~---~~~~g~~~~~----~l~~i~~~~~~~~~via~G 261 (344)
.++++.+. +-|+.+=++.+.-.|+.+.++|+|+|.+++.+ +. ..|.++-+++ .+..|.+.. ++||++|.
T Consensus 10 ~lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~ 86 (295)
T 1s2w_A 10 QLKQMLNS-KDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS--DVPILLDA 86 (295)
T ss_dssp HHHHHHHS-SSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC--SSCEEEEC
T ss_pred HHHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEecC
Confidence 34454442 56888888899999999999999999998632 11 1222332322 233333333 79999986
Q ss_pred --CCCCHHHHH----HHHHcCCCEEEEc
Q 019244 262 --GVRRGTDVF----KALALGASGIFIG 283 (344)
Q Consensus 262 --GIr~g~dv~----kalalGAd~V~ig 283 (344)
|..+..++. +.+..||.+|-+-
T Consensus 87 d~Gyg~~~~v~~~v~~l~~aGaagv~iE 114 (295)
T 1s2w_A 87 DTGYGNFNNARRLVRKLEDRGVAGACLE 114 (295)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 555655554 3456899999874
No 367
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=86.49 E-value=0.94 Score=40.62 Aligned_cols=42 Identities=21% Similarity=0.294 Sum_probs=36.0
Q ss_pred cHHHHHHHHHhcCCcEEEEeecC-HHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTITKLPILVKGVLT-AEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~~-~~~a~~~~~~G~d~I~v~~ 228 (344)
..+.++++++..++||++-+..+ ++++..+.++|+|+++|.+
T Consensus 189 ~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGS 231 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGS 231 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEECh
Confidence 34578999998899999987655 9999999999999999954
No 368
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=86.40 E-value=1.5 Score=41.89 Aligned_cols=87 Identities=9% Similarity=-0.020 Sum_probs=64.8
Q ss_pred HHHHHHHHHhc--CCcEEEEee--c-CHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--L-TAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~-~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
.+.++.+|+.+ +.++.+..- . +.+++ +.+.+.|+++|--- ..+..++.+.++++.. ++||+
T Consensus 187 ~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iEeP--------~~~~~~~~~~~l~~~~--~iPIa 256 (394)
T 3mqt_A 187 VAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIEAC--------LQHDDLIGHQKLAAAI--NTRLC 256 (394)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEESC--------SCTTCHHHHHHHHHHS--SSEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEECC--------CCcccHHHHHHHHhhC--CCCEE
Confidence 45688899887 578888753 5 66664 44556788888521 1123567778887776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 257 ~dE~~~~~~~~~~~l~~~~~d~v~~k~ 283 (394)
T 3mqt_A 257 GAEMSTTRFEAQEWLEKTGISVVQSDY 283 (394)
T ss_dssp ECTTCCHHHHHHHHHHHHCCSEECCCT
T ss_pred eCCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 999999999999999986 79988753
No 369
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=86.38 E-value=2.2 Score=40.80 Aligned_cols=87 Identities=11% Similarity=-0.012 Sum_probs=64.9
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+++++ +.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 204 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~iPIa 273 (410)
T 2gl5_A 204 GEARIAAMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYEEP--------IHPLNSDNMQKVSRST--TIPIA 273 (410)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECS--------SCSSCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEECC--------CChhhHHHHHHHHhhC--CCCEE
Confidence 456788999887 588888753 466664 45566787776421 1123577788888776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
+++.+.+..++.+++..| +|.|++-
T Consensus 274 ~dE~~~~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 274 TGERSYTRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp ECTTCCTTHHHHHHHHTTCCSEECCC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999987 7998874
No 370
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=86.32 E-value=7.5 Score=33.59 Aligned_cols=87 Identities=22% Similarity=0.076 Sum_probs=56.0
Q ss_pred HHHHHHHHHhc-CCcE--EEEeecCHH-HHHHHHHcCCcEEEEccCCCCCCCCchhhHH-HHHHHHHHccCCCcEEE-ec
Q 019244 188 WKDVKWLQTIT-KLPI--LVKGVLTAE-DARIAVQAGAAGIIVSNHGARQLDYVPATIM-ALEEVVKATQGRIPVFL-DG 261 (344)
Q Consensus 188 ~~~i~~i~~~~-~~Pv--ivK~v~~~~-~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~-~l~~i~~~~~~~~~via-~G 261 (344)
.+.|+++|+.+ +.|+ -+|....++ .++.+.++|+|+|++...++ ..++. .+..+.+ . .+..++ .=
T Consensus 47 ~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~------~~~~~~~~~~~~~-~--g~~~~~d~l 117 (218)
T 3jr2_A 47 MKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAH------IATIAACKKVADE-L--NGEIQIEIY 117 (218)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSC------HHHHHHHHHHHHH-H--TCEEEEECC
T ss_pred HHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCC------HHHHHHHHHHHHH-h--CCccceeee
Confidence 45799999884 5555 456654444 47889999999999954322 22232 3333332 2 355554 34
Q ss_pred CCCCHHHHHHHHHcCCCEEEEc
Q 019244 262 GVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 262 GIr~g~dv~kalalGAd~V~ig 283 (344)
|+.|..++.++..+|+|.+.+.
T Consensus 118 ~~~T~~~~~~~~~~g~d~v~~~ 139 (218)
T 3jr2_A 118 GNWTMQDAKAWVDLGITQAIYH 139 (218)
T ss_dssp SSCCHHHHHHHHHTTCCEEEEE
T ss_pred ecCCHHHHHHHHHcCccceeee
Confidence 5678888888888999987653
No 371
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=86.29 E-value=14 Score=34.99 Aligned_cols=89 Identities=17% Similarity=0.063 Sum_probs=61.9
Q ss_pred HHHHHHHHHhcC--CcEEEEee--cCHHHH----HHHHH--cCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 188 WKDVKWLQTITK--LPILVKGV--LTAEDA----RIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 188 ~~~i~~i~~~~~--~PvivK~v--~~~~~a----~~~~~--~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
.+.++.+|+.++ +++.+..- .+.++| +.+.+ .++.+|-= ...+..++.+.++++.. .+||
T Consensus 173 ~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iEe--------P~~~~d~~~~~~l~~~~--~iPI 242 (379)
T 3r0u_A 173 IQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLNVEIIEQ--------PVKYYDIKAMAEITKFS--NIPV 242 (379)
T ss_dssp HHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCCEEEEEC--------CSCTTCHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEEC--------CCCcccHHHHHHHHhcC--CCCE
Confidence 456888888873 67777642 466665 34445 46666531 11123467777887766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchHH
Q 019244 258 FLDGGVRRGTDVFKALALG-ASGIFIGRPV 286 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalG-Ad~V~ig~~~ 286 (344)
.++.-+.+..|+.+++..| +|.|++--..
T Consensus 243 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 272 (379)
T 3r0u_A 243 VADESVFDAKDAERVIDEQACNMINIKLAK 272 (379)
T ss_dssp EESTTCSSHHHHHHHHHTTCCSEEEECHHH
T ss_pred EeCCccCCHHHHHHHHHcCCCCEEEECccc
Confidence 9999999999999999987 6888886443
No 372
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=86.11 E-value=2.9 Score=39.26 Aligned_cols=89 Identities=16% Similarity=0.100 Sum_probs=63.6
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|-= ...+..++.+.++++.. .+||++
T Consensus 171 ~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 240 (356)
T 3ro6_B 171 FERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIEFIEQ--------PFPAGRTDWLRALPKAI--RRRIAA 240 (356)
T ss_dssp HHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTCCCEEC--------CSCTTCHHHHHTSCHHH--HHTEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCCCcHHHHHHHHhcC--CCCEEe
Confidence 45688888887 477887753 455554 5567888888852 01122456666666555 699999
Q ss_pred ecCCCCHHHHHHHHHcC--CCEEEEchHH
Q 019244 260 DGGVRRGTDVFKALALG--ASGIFIGRPV 286 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG--Ad~V~ig~~~ 286 (344)
++-+.+..|+.+++..| +|.|++--..
T Consensus 241 dE~~~~~~~~~~~~~~~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 241 DESLLGPADAFALAAPPAACGIFNIKLMK 269 (356)
T ss_dssp STTCCSHHHHHHHHSSSCSCSEEEECHHH
T ss_pred CCcCCCHHHHHHHHhcCCcCCEEEEcccc
Confidence 99999999999999876 8999987543
No 373
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=86.10 E-value=2.1 Score=41.10 Aligned_cols=87 Identities=9% Similarity=-0.050 Sum_probs=66.1
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ +.++.+..- .+.+++ +.+.+.|+++|-.- ...++.+.++++.+ .+||+
T Consensus 199 ~~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P----------~~d~~~~~~l~~~~--~iPIa 266 (409)
T 3go2_A 199 LRAHLEALRDGAGPDVEILLDLNFNAKPEGYLKILRELADFDLFWVEID----------SYSPQGLAYVRNHS--PHPIS 266 (409)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEECC----------CSCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEEeC----------cCCHHHHHHHHhhC--CCCEE
Confidence 346789999987 588888753 466664 44556788888742 12566777777765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+++.+.+..|+.+++..| +|.|++--.
T Consensus 267 ~dE~~~~~~~~~~~i~~~~~d~v~~k~~ 294 (409)
T 3go2_A 267 SCETLFGIREFKPFFDANAVDVAIVDTI 294 (409)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEEEECHH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEeCCC
Confidence 999999999999999988 799888643
No 374
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=85.96 E-value=2.8 Score=39.92 Aligned_cols=88 Identities=14% Similarity=0.181 Sum_probs=64.5
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.. ++||+
T Consensus 175 ~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP--------~~~~~~~~~~~l~~~~--~iPIa 244 (397)
T 2qde_A 175 DIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLSKIEQP--------LPAWDLDGMARLRGKV--ATPIY 244 (397)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEECC--------SCTTCHHHHHHHHTTC--SSCEE
T ss_pred HHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCCCEEECC--------CChhhHHHHHHHHhhC--CCCEE
Confidence 345688899887 588888753 466654 45667788877421 1123567777777655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 245 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 271 (397)
T 2qde_A 245 ADESAQELHDLLAIINKGAADGLMIKT 271 (397)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 999999999999999987 89998853
No 375
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=85.92 E-value=4.7 Score=37.79 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=65.7
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHH--cCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCc
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP 256 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~--~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~ 256 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+ .|+++|-= ...+..++.+.++++.. ++|
T Consensus 171 d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~ip 240 (366)
T 1tkk_A 171 DIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVEQ--------PVHKDDLAGLKKVTDAT--DTP 240 (366)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEEC--------CSCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEEC--------CCCcccHHHHHHHHhhC--CCC
Confidence 345788999887 588888753 456554 55667 77777741 11234677788887766 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 257 VFLDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 257 via~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
|++++.+.+..|+.+++..| +|.|++--.
T Consensus 241 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 270 (366)
T 1tkk_A 241 IMADESVFTPRQAFEVLQTRSADLINIKLM 270 (366)
T ss_dssp EEECTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EEEcCCCCCHHHHHHHHHhCCCCEEEeehh
Confidence 99999999999999999877 899998643
No 376
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=85.91 E-value=3.5 Score=37.74 Aligned_cols=92 Identities=21% Similarity=0.264 Sum_probs=60.3
Q ss_pred HHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-C-C---CCCCchhhHHH-HHHHHHHcc-CCCcEEEec--
Q 019244 191 VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A-R---QLDYVPATIMA-LEEVVKATQ-GRIPVFLDG-- 261 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G-~---~~~~g~~~~~~-l~~i~~~~~-~~~~via~G-- 261 (344)
++++.+. +-|+.+=++.+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++. +..++...+ -++||++|.
T Consensus 13 lr~l~~~-~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~ 91 (287)
T 3b8i_A 13 FRALLDS-SRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADH 91 (287)
T ss_dssp HHHHHHS-SCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTT
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4444432 56888888889999999999999999998652 1 0 13444445443 333332222 278999976
Q ss_pred CCCCHHHHH----HHHHcCCCEEEEc
Q 019244 262 GVRRGTDVF----KALALGASGIFIG 283 (344)
Q Consensus 262 GIr~g~dv~----kalalGAd~V~ig 283 (344)
|..+..++. +.+..||.+|-+-
T Consensus 92 Gyg~~~~~~~~v~~l~~aGa~gv~iE 117 (287)
T 3b8i_A 92 GYGNALNVMRTVVELERAGIAALTIE 117 (287)
T ss_dssp CSSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEc
Confidence 555766654 4556899999874
No 377
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=85.91 E-value=3.6 Score=37.49 Aligned_cols=89 Identities=17% Similarity=0.202 Sum_probs=50.1
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 287 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l 287 (344)
++.+++.|+|+|.+.|+-|-...-.. .-.+.+..+.+.+.+ ||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 26 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g---ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 102 (288)
T 2nuw_A 26 AKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK---LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYY 102 (288)
T ss_dssp HHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC---EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 34577899999999775442111111 112333333333332 655334334455543 2337999999999988
Q ss_pred HH-hhhcChHHHHHHHHHHHH
Q 019244 288 YS-LAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 288 ~~-~~~~G~~~v~~~l~~l~~ 307 (344)
+. . .++++.++++.+.+
T Consensus 103 ~~~~---s~~~l~~~f~~va~ 120 (288)
T 2nuw_A 103 FPRL---PEKFLAKYYEEIAR 120 (288)
T ss_dssp SCSC---CHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHH
Confidence 64 2 45666666655543
No 378
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=85.49 E-value=2.1 Score=41.07 Aligned_cols=88 Identities=20% Similarity=0.115 Sum_probs=66.0
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.+ +.++.+..- .+.++| +.+.+.|+++|--- ..+..++.+.++++.. ++||+
T Consensus 194 d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP--------~~~~~~~~~~~l~~~~--~iPIa 263 (404)
T 4e5t_A 194 SEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLEAYDPLWFEEP--------IPPEKPEDMAEVARYT--SIPVA 263 (404)
T ss_dssp HHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCcEEECC--------CCcccHHHHHHHHhhC--CCCEE
Confidence 345788999987 478888753 466664 45667888888521 1123567788888776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 264 ~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 264 TGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp ECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 999999999999999988 68888754
No 379
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=85.37 E-value=2 Score=41.07 Aligned_cols=87 Identities=8% Similarity=-0.069 Sum_probs=64.8
Q ss_pred HHHHHHHHHhc--CCcEEEEee--c-CHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--L-TAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~-~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
.+.++.+|+.+ +.++.+..- . +.+++ +.+.+.|+++|--- ..+..++.+.++++.. ++||+
T Consensus 192 ~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iEeP--------~~~~d~~~~~~l~~~~--~iPIa 261 (394)
T 3mkc_A 192 AYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELYFAEAT--------LQHDDLSGHAKLVENT--RSRIC 261 (394)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCSEEESC--------SCTTCHHHHHHHHHHC--SSCBE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEECC--------CCchhHHHHHHHHhhC--CCCEE
Confidence 45688899887 478888753 5 66664 44556788887521 1123567778887776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 262 ~dE~~~~~~~~~~~l~~~~~d~v~~k~ 288 (394)
T 3mkc_A 262 GAEMSTTRFEAEEWITKGKVHLLQSDY 288 (394)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred eCCCCCCHHHHHHHHHcCCCCeEecCc
Confidence 999999999999999987 79988853
No 380
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=85.36 E-value=4.8 Score=38.91 Aligned_cols=88 Identities=13% Similarity=0.093 Sum_probs=61.7
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHHHH----HHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDARI----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a~~----~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++.. +.+.|+++|--- ..+..++.+.++++.+. .+||+
T Consensus 228 d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~~-~iPIa 298 (441)
T 2hxt_A 228 DIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWIEEP--------TSPDDVLGHAAIRQGIT-PVPVS 298 (441)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCCSCEECC--------SCTTCHHHHHHHHHHHT-TSCEE
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeCC--------CCHHHHHHHHHHHhhCC-CCCEE
Confidence 345688888876 477777642 46666543 445677766421 11235667777777652 59999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
+++.+.+..|+.+++..| +|.|++-
T Consensus 299 ~dE~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 299 TGEHTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp ECTTCCSHHHHHHHHHHTCCSEECCC
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999999987 7999874
No 381
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=85.36 E-value=12 Score=35.66 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=59.3
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEcc--CCCCCCCCchhhHHHHHHHHHHccCCCcEEEecC
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVSN--HGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 262 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~~--~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GG 262 (344)
+++..+++++.+++||..-+. .+.++++.+++.| +|.|.+.- .|| +.....+..+++.. .+++...+-
T Consensus 243 d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GG------it~~~~ia~~A~~~--gi~~~~~~~ 314 (400)
T 3mwc_A 243 ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGG------LLEAIKIYKIATDN--GIKLWGGTM 314 (400)
T ss_dssp CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTS------HHHHHHHHHHHHHT--TCEEEECCS
T ss_pred hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCC------HHHHHHHHHHHHHc--CCEEEecCC
Confidence 688899999999999998775 5789999998877 77777642 233 44333444444444 688887776
Q ss_pred CCCHHHHHHHHHcCC
Q 019244 263 VRRGTDVFKALALGA 277 (344)
Q Consensus 263 Ir~g~dv~kalalGA 277 (344)
..++--.+-++.+.|
T Consensus 315 ~es~i~~aa~~hlaa 329 (400)
T 3mwc_A 315 PESGLGARFLISLAS 329 (400)
T ss_dssp CCCHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHc
Confidence 777777776776654
No 382
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=85.27 E-value=2.4 Score=40.46 Aligned_cols=87 Identities=14% Similarity=0.101 Sum_probs=65.1
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 201 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~iPIa 270 (407)
T 2o56_A 201 GYDRMAAIRDAVGPDVDIIAEMHAFTDTTSAIQFGRMIEELGIFYYEEP--------VMPLNPAQMKQVADKV--NIPLA 270 (407)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEECS--------SCSSSHHHHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEeCC--------CChhhHHHHHHHHHhC--CCCEE
Confidence 446788999877 588888753 466654 45667788877421 1123577788888776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
+++.+.+..++.+++..| +|.|++-
T Consensus 271 ~dE~~~~~~~~~~~i~~~~~d~v~ik 296 (407)
T 2o56_A 271 AGERIYWRWGYRPFLENGSLSVIQPD 296 (407)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999987 7988874
No 383
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=85.25 E-value=2 Score=41.57 Aligned_cols=88 Identities=10% Similarity=-0.086 Sum_probs=66.1
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ +.++.+..- .+.++| +.+.+.|+++|---- .+..++.+.++++.. ++||+
T Consensus 213 d~e~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~--------~~~d~~~~~~l~~~~--~iPIa 282 (425)
T 3vcn_A 213 VPKLFERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDSV--------PAENQAGFRLIRQHT--TTPLA 282 (425)
T ss_dssp THHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCS--------CCSSTTHHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCC--------ChhhHHHHHHHHhcC--CCCEE
Confidence 567899999988 578888753 466664 556678888885311 112445677777766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 283 ~dE~~~~~~~~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 283 VGEIFAHVWDAKQLIEEQLIDYLRATV 309 (425)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred eCCCcCCHHHHHHHHHcCCCCeEecCh
Confidence 999999999999999988 78888764
No 384
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=85.17 E-value=6.6 Score=36.26 Aligned_cols=91 Identities=20% Similarity=0.209 Sum_probs=60.0
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-----CCCCCCchhhHH----HHHHHHHHccCCCcEEEe
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-----ARQLDYVPATIM----ALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-----G~~~~~g~~~~~----~l~~i~~~~~~~~~via~ 260 (344)
.++++.+. +-|+++=++.+.-.|+.+.++|+|+|.+++.+ | ..|.++-+++ .+..|.+.. ++||++|
T Consensus 20 ~lr~l~~~-~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G-~pD~~~vt~~em~~~~~~I~r~~--~~pviaD 95 (305)
T 3ih1_A 20 RFRALVEA-NEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKG-LPDLGIVTSTEVAERARDLVRAT--DLPVLVD 95 (305)
T ss_dssp HHHHHHHS-SSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHT-CCSSSCSCHHHHHHHHHHHHHHH--CCCEEEE
T ss_pred HHHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCC-CCCCCcCCHHHHHHHHHHHHHhc--CCCEEEE
Confidence 34444443 56888888888899999999999999998621 2 1244443433 334444444 6899997
Q ss_pred c--CCCCHHHHHH----HHHcCCCEEEEch
Q 019244 261 G--GVRRGTDVFK----ALALGASGIFIGR 284 (344)
Q Consensus 261 G--GIr~g~dv~k----alalGAd~V~ig~ 284 (344)
. |..+..++.+ ....||.+|-+--
T Consensus 96 ~d~Gyg~~~~v~~~v~~l~~aGaagv~iED 125 (305)
T 3ih1_A 96 IDTGFGGVLNVARTAVEMVEAKVAAVQIED 125 (305)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCcEEEECC
Confidence 6 5555555543 3458999997643
No 385
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=85.17 E-value=3 Score=37.61 Aligned_cols=72 Identities=14% Similarity=0.287 Sum_probs=52.0
Q ss_pred CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHH
Q 019244 209 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 209 ~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~ 286 (344)
++.+..+..++||++|-|-+-. ++=..+.+.|..+++.+ ++||+--==|-+..++.++-++|||+|.+=-.+
T Consensus 65 dp~~iA~~~~~GA~aiSVLTd~----~~F~Gs~~~L~~vr~~v--~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~ 136 (258)
T 4a29_A 65 DPIEYAKFMERYAVGLSITTEE----KYFNGSYETLRKIASSV--SIPILMSDFIVKESQIDDAYNLGADTVLLIVKI 136 (258)
T ss_dssp CHHHHHHHHTTTCSEEEEECCS----TTTCCCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGG
T ss_pred CHHHHHHHHhCCCeEEEEeCCC----CCCCCCHHHHHHHHHhc--CCCEeeccccccHHHHHHHHHcCCCeeehHHhh
Confidence 4545445678999999885421 01112456777787766 799998778999999999999999999764433
No 386
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=85.09 E-value=24 Score=32.81 Aligned_cols=84 Identities=18% Similarity=0.114 Sum_probs=55.8
Q ss_pred CCcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecC
Q 019244 185 SLSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 262 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GG 262 (344)
..+|+..+++++.+++||..-+. .++++++.+++.| +|.|.+.-. .-+|......+..+++.. .++++..+.
T Consensus 219 ~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~----~~GGit~~~~i~~~A~~~--g~~~~~~~~ 292 (368)
T 1sjd_A 219 EEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPG----RVGGYLEARRVHDVCAAH--GIPVWCGGM 292 (368)
T ss_dssp TTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTT----TTTSHHHHHHHHHHHHHT--TCCEEECCC
T ss_pred hhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEeccc----ccCCHHHHHHHHHHHHHc--CCcEEeCCc
Confidence 34788899999999999988775 5789999998877 788877421 112344333344444444 688877777
Q ss_pred CCCHHHHHHHHH
Q 019244 263 VRRGTDVFKALA 274 (344)
Q Consensus 263 Ir~g~dv~kala 274 (344)
..++.-..-++.
T Consensus 293 ~es~i~~aa~~h 304 (368)
T 1sjd_A 293 IETGLGRAANVA 304 (368)
T ss_dssp CCCHHHHHHHHH
T ss_pred cccHHHHHHHHH
Confidence 766655443333
No 387
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=84.84 E-value=13 Score=33.84 Aligned_cols=95 Identities=14% Similarity=0.149 Sum_probs=61.6
Q ss_pred cHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCC----CCCCchhhHHH----HHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMA----LEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~----~~~~g~~~~~~----l~~i~~~~~~~~~vi 258 (344)
+...++++++. +-|+.+=.+-+.-.|+.+.++|+|.|.++...+- ..|.++-+++- ...+++.. ...+|+
T Consensus 5 t~~~lr~~k~~-g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vv 82 (275)
T 1o66_A 5 TVNTLQKMKAA-GEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA-KNAMIV 82 (275)
T ss_dssp CHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-SSSEEE
T ss_pred CHHHHHHHHhC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC-CCCeEE
Confidence 44456665553 5688887788899999999999999976432221 12344445443 23333333 246788
Q ss_pred EecCC----CCHHHHH----HHHHcCCCEEEEc
Q 019244 259 LDGGV----RRGTDVF----KALALGASGIFIG 283 (344)
Q Consensus 259 a~GGI----r~g~dv~----kalalGAd~V~ig 283 (344)
+|=+. .|..+++ +.+..||++|-+-
T Consensus 83 aD~pfgsy~~s~~~a~~na~rl~kaGa~aVklE 115 (275)
T 1o66_A 83 SDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLE 115 (275)
T ss_dssp EECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EECCCCCccCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 98555 3577776 5777999999873
No 388
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=84.80 E-value=2.3 Score=40.47 Aligned_cols=87 Identities=16% Similarity=0.151 Sum_probs=64.3
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.. ++||+
T Consensus 185 ~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~P--------~~~~~~~~~~~l~~~~--~ipIa 254 (392)
T 2poz_A 185 AYRRVKAVRDAAGPEIELMVDLSGGLTTDETIRFCRKIGELDICFVEEP--------CDPFDNGALKVISEQI--PLPIA 254 (392)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECC--------SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CCcccHHHHHHHHhhC--CCCEE
Confidence 446788899877 588888753 466664 44566787776421 1123577788887776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
+++.+.+..++.+++..| +|.|++-
T Consensus 255 ~dE~~~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 255 VGERVYTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp ECTTCCHHHHHHHHHTTTCCSEECCC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999987 7888874
No 389
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=84.80 E-value=0.74 Score=39.56 Aligned_cols=44 Identities=20% Similarity=0.440 Sum_probs=38.4
Q ss_pred CCcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEcc
Q 019244 185 SLSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.+.|+.++++++..++|+++-+..+++++..+.++|+|++.++.
T Consensus 148 ~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 148 VIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp CCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTTCSEEEESH
T ss_pred CcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcCCCEEEEhH
Confidence 45788999999888999999887779999999999999999853
No 390
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=84.78 E-value=17 Score=33.65 Aligned_cols=91 Identities=24% Similarity=0.307 Sum_probs=61.2
Q ss_pred HHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-C-C---CCCCchhhHH----HHHHHHHHccCCCcEEEec
Q 019244 191 VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A-R---QLDYVPATIM----ALEEVVKATQGRIPVFLDG 261 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G-~---~~~~g~~~~~----~l~~i~~~~~~~~~via~G 261 (344)
++++.+. +-|+.+=++.+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++ .+..|.+..+ ++||++|.
T Consensus 31 lr~l~~~-~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~-~~PviaD~ 108 (318)
T 1zlp_A 31 MHRLIEE-HGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP-NLCVVVDG 108 (318)
T ss_dssp HHHHHHH-SSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS-SSEEEEEC
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc-CCCEEEeC
Confidence 4444443 56888888899999999999999999998731 1 0 1344444443 3344444442 79999986
Q ss_pred --CCCCHHHHH----HHHHcCCCEEEEc
Q 019244 262 --GVRRGTDVF----KALALGASGIFIG 283 (344)
Q Consensus 262 --GIr~g~dv~----kalalGAd~V~ig 283 (344)
|..+..++. +.+..||.+|-+-
T Consensus 109 d~Gyg~~~~v~~tv~~l~~aGaagv~iE 136 (318)
T 1zlp_A 109 DTGGGGPLNVQRFIRELISAGAKGVFLE 136 (318)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 555666554 4556899999874
No 391
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=84.40 E-value=2.2 Score=40.66 Aligned_cols=88 Identities=14% Similarity=0.009 Sum_probs=64.7
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 195 ~~e~v~avr~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P--------~~~~d~~~~~~l~~~~--~iPIa 264 (403)
T 2ox4_A 195 GVERVEAIRNAVGPDVDIIVENHGHTDLVSAIQFAKAIEEFNIFFYEEI--------NTPLNPRLLKEAKKKI--DIPLA 264 (403)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECC--------SCTTSTHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEeCC--------CChhhHHHHHHHHHhC--CCCEE
Confidence 446788899877 588888753 466654 45566787776421 1123567777777766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..++.+++..| +|.|++--
T Consensus 265 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 291 (403)
T 2ox4_A 265 SGERIYSRWGFLPFLEDRSIDVIQPDL 291 (403)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCH
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 999999999999999987 79998854
No 392
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=84.39 E-value=0.97 Score=39.28 Aligned_cols=44 Identities=25% Similarity=0.308 Sum_probs=37.9
Q ss_pred CCcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEcc
Q 019244 185 SLSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.+.|+.++++++..++|+++=+..+++++..+.++|+++|.++.
T Consensus 150 ~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 150 GRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp -CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTTCSEEEESH
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCEEEEhH
Confidence 45788899999888999988776799999999999999999953
No 393
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=84.35 E-value=1.5 Score=40.57 Aligned_cols=79 Identities=29% Similarity=0.539 Sum_probs=55.1
Q ss_pred HhcCCcEEEE-------e--e---cCHHH----HHHHHHcCCc----EEEEccCCCCCCCCchhhHHHHHHHHHHccCCC
Q 019244 196 TITKLPILVK-------G--V---LTAED----ARIAVQAGAA----GIIVSNHGARQLDYVPATIMALEEVVKATQGRI 255 (344)
Q Consensus 196 ~~~~~PvivK-------~--v---~~~~~----a~~~~~~G~d----~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~ 255 (344)
..+++|+++= + + .+++. ++.+.+.|+| .|++-- + +.+.++.+.. .+
T Consensus 173 ~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y-----------~-e~f~~Vv~a~--~v 238 (307)
T 3fok_A 173 AAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPV-----------V-EEMERVMEST--TM 238 (307)
T ss_dssp HHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEEC-----------C-TTHHHHGGGC--SS
T ss_pred HHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCC-----------c-HHHHHHHHhC--CC
Confidence 3468998763 0 1 34443 5778899999 998821 1 3456666555 69
Q ss_pred cEEEecCCCC--HHHHH----HHHH-cCCCEEEEchHHHH
Q 019244 256 PVFLDGGVRR--GTDVF----KALA-LGASGIFIGRPVVY 288 (344)
Q Consensus 256 ~via~GGIr~--g~dv~----kala-lGAd~V~ig~~~l~ 288 (344)
|++..||=.+ ..+++ +++. .||..+.+||-+++
T Consensus 239 PVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 239 PTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp CEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSS
T ss_pred CEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhcc
Confidence 9999998874 45555 5667 59999999998875
No 394
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=84.26 E-value=4.6 Score=37.26 Aligned_cols=67 Identities=18% Similarity=0.148 Sum_probs=45.5
Q ss_pred HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 213 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 213 a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~---GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
++...++|+|.|-+- ++.+.+.+.++.+.++ ..|+.++ +|-.....+.+.-.+|.+.|..+..++.+
T Consensus 176 a~ay~eAGAD~ifi~---------g~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~ra 245 (302)
T 3fa4_A 176 LRAARDAGADVGFLE---------GITSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGP 245 (302)
T ss_dssp HHHHHTTTCSEEEET---------TCCCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHH
T ss_pred HHHHHHcCCCEEeec---------CCCCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 566789999999883 2345667777777763 4787663 33222223445566899999999887764
No 395
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=84.26 E-value=9.8 Score=35.10 Aligned_cols=45 Identities=18% Similarity=0.321 Sum_probs=33.1
Q ss_pred CCCCcHHHHHHHHHhcCCcEEEEeec-----------------------CHHHHHHHHHcCCcEEEEc
Q 019244 183 DRSLSWKDVKWLQTITKLPILVKGVL-----------------------TAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 183 ~~~~~~~~i~~i~~~~~~PvivK~v~-----------------------~~~~a~~~~~~G~d~I~v~ 227 (344)
.+.++++.+++|++.+++|+++-+.. +.++.+++++.|+.-|-++
T Consensus 186 ~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~ 253 (305)
T 1rvg_A 186 RPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTD 253 (305)
T ss_dssp SCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTTEEEEEEC
T ss_pred CCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCCCeEEEEC
Confidence 34567888999999889999988765 3466667777776666653
No 396
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=84.04 E-value=23 Score=32.63 Aligned_cols=110 Identities=20% Similarity=0.198 Sum_probs=71.6
Q ss_pred cCHHHHHHHH-HcCCcEEEEcc---CCCCCCCCch-hhHHHHHHHHHHccCCCcEEEecCC-------------------
Q 019244 208 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGV------------------- 263 (344)
Q Consensus 208 ~~~~~a~~~~-~~G~d~I~v~~---~gG~~~~~g~-~~~~~l~~i~~~~~~~~~via~GGI------------------- 263 (344)
.+|++|.... +.|+|.+-++- ||-+...+.| -.++.|.+|.+.. ++|+..=||=
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~--~~PLVlHGgS~vp~~~~~~~~~~gg~~~~ 232 (307)
T 3n9r_A 155 VNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT--NIPLVLHGASAIPDNVRKSYLDAGGDLKG 232 (307)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH--CSCEEESSCCCCCHHHHHHHHHTTCCCTT
T ss_pred CCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC--CCCeEEeCCCCcchHHHHHHHHhcCccCC
Confidence 5688887754 69999999873 5543211222 2567788886554 6999997743
Q ss_pred ---CCHHHHHHHHHcCCCEEEEchHHHHHhhh-------cCh------HHHHHHHHHHHHHHHHHHHHhCCC
Q 019244 264 ---RRGTDVFKALALGASGIFIGRPVVYSLAA-------EGE------KGVRRVLEMLREEFELAMALSGCR 319 (344)
Q Consensus 264 ---r~g~dv~kalalGAd~V~ig~~~l~~~~~-------~G~------~~v~~~l~~l~~el~~~m~~~G~~ 319 (344)
-.-+++.|++.+|..=|-+++-+.++... ... .-+....+.+++.++..|..+|+.
T Consensus 233 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 304 (307)
T 3n9r_A 233 SKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSA 304 (307)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHcCceEEEechHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 23678889999999999999977654321 010 112233345666777777777764
No 397
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=83.70 E-value=12 Score=33.87 Aligned_cols=95 Identities=13% Similarity=0.087 Sum_probs=62.8
Q ss_pred cHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCC----CCCCchhhHHH----HHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMA----LEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~----~~~~g~~~~~~----l~~i~~~~~~~~~vi 258 (344)
+...++++++. +-|+.+=.+-+.-.|+.+.++|+|.|.++...+- ..|.++-+++- ...+++.. ...+|+
T Consensus 5 t~~~lr~~k~~-g~~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~-~~~~vv 82 (264)
T 1m3u_A 5 TISLLQKYKQE-KKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGA-PNCLLL 82 (264)
T ss_dssp CHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-TTSEEE
T ss_pred CHHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhC-CCCcEE
Confidence 44456665553 5688887788899999999999999999432221 12344445443 23333333 246788
Q ss_pred EecCCC---CHHHHH----HHHHcCCCEEEEc
Q 019244 259 LDGGVR---RGTDVF----KALALGASGIFIG 283 (344)
Q Consensus 259 a~GGIr---~g~dv~----kalalGAd~V~ig 283 (344)
+|-+.. |..+++ +.+..||++|-+-
T Consensus 83 aD~pfgsy~~~~~a~~~a~rl~kaGa~aVklE 114 (264)
T 1m3u_A 83 ADLPFMAYATPEQAFENAATVMRAGANMVKIE 114 (264)
T ss_dssp EECCTTSSSSHHHHHHHHHHHHHTTCSEEECC
T ss_pred EECCCCCcCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 887665 777777 4777999999873
No 398
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=83.69 E-value=9.9 Score=36.07 Aligned_cols=126 Identities=13% Similarity=0.030 Sum_probs=0.0
Q ss_pred HHHHcCCcc------------------c----cCCHHHHHHHHHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCcc
Q 019244 96 AASAAGTIM------------------V----YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFL 153 (344)
Q Consensus 96 aA~~~g~~~------------------~----~~d~~~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~ 153 (344)
.++.+|.|. . ..+++...+.++++.+.||+++-+.+.
T Consensus 108 ~gK~~g~Pl~~LLGg~~r~~v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG--------------------- 166 (391)
T 3gd6_A 108 CAKYLDISVSDFLGGRVKEKIKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVG--------------------- 166 (391)
T ss_dssp HHHHHTSBHHHHTTCCSCSEEEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECS---------------------
T ss_pred HhcccCCcHHHHhCCCcCCeEEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeC---------------------
Q ss_pred cccccccccccccccccchhhHHHHhhcCCCCCcHHHHHHHHHhc--CCcEE-EEee--cCHHH----HHHHHHcCC--c
Q 019244 154 TLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTIT--KLPIL-VKGV--LTAED----ARIAVQAGA--A 222 (344)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~--~~Pvi-vK~v--~~~~~----a~~~~~~G~--d 222 (344)
.+...+.+.++.+|+.+ +.++. +..- .++++ ++.+.+.|+ +
T Consensus 167 ----------------------------~~~~~d~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~ 218 (391)
T 3gd6_A 167 ----------------------------KNLDADEEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLE 218 (391)
T ss_dssp ----------------------------SCHHHHHHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCC
T ss_pred ----------------------------CCHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcc
Q ss_pred EEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcC-CCEEEE
Q 019244 223 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFI 282 (344)
Q Consensus 223 ~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalG-Ad~V~i 282 (344)
+| .....+..++.+.++++.. .+|| +..+.+..|+.+++..| +|.|++
T Consensus 219 ~i--------EqP~~~~d~~~~~~l~~~~--~iPI--dE~~~~~~~~~~~~~~~~~d~v~~ 267 (391)
T 3gd6_A 219 MI--------ESPAPRNDFDGLYQLRLKT--DYPI--SEHVWSFKQQQEMIKKDAIDIFNI 267 (391)
T ss_dssp EE--------ECCSCTTCHHHHHHHHHHC--SSCE--EEECCCHHHHHHHHHHTCCSEEEE
T ss_pred ee--------cCCCChhhHHHHHHHHHHc--CCCc--CCCCCCHHHHHHHHHcCCCCEEEE
No 399
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=83.68 E-value=3.6 Score=37.76 Aligned_cols=97 Identities=23% Similarity=0.325 Sum_probs=57.5
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHHH----HHHHHcCCcEEEEccCCCCCCCCch--hhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAEDA----RIAVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~--~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++++. .+++||++|..+ ++++. ..+...|.+-+.+.-.|++ ..... ..+..++.+++.. ..+||+
T Consensus 121 n~~Ll~~~a-~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~-~~y~~~~~dl~~i~~lk~~~-~~~pV~ 197 (292)
T 1o60_A 121 QTDLVEAMA-KTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTN-FGYDNLIVDMLGFSVMKKAS-KGSPVI 197 (292)
T ss_dssp CHHHHHHHH-HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE-CSTTCEECCTTHHHHHHHHT-TSCCEE
T ss_pred CHHHHHHHH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC-CCCCccccCHHHHHHHHhhC-CCCCEE
Confidence 456788877 469999999874 55553 4456788766666544432 11111 2344555555543 258999
Q ss_pred Eec-----------CCCCH-----HHHH-HHHHcCCCEEEEchHH
Q 019244 259 LDG-----------GVRRG-----TDVF-KALALGASGIFIGRPV 286 (344)
Q Consensus 259 a~G-----------GIr~g-----~dv~-kalalGAd~V~ig~~~ 286 (344)
.|. +-..+ ..+. .++++||++++|-+-+
T Consensus 198 ~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~ 242 (292)
T 1o60_A 198 FDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHP 242 (292)
T ss_dssp EEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEES
T ss_pred EECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecC
Confidence 942 22233 2343 6678999999999865
No 400
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=83.51 E-value=4.7 Score=35.62 Aligned_cols=41 Identities=22% Similarity=0.191 Sum_probs=34.3
Q ss_pred cHHHHHHHHHhc-----CCcEEEEeecCHHHHHHHHHcCCcEEEEc
Q 019244 187 SWKDVKWLQTIT-----KLPILVKGVLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 187 ~~~~i~~i~~~~-----~~PvivK~v~~~~~a~~~~~~G~d~I~v~ 227 (344)
.++.|+++|+.. ++++.|-+..+++.+..+.++|||.++++
T Consensus 150 ~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 150 MLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEc
Confidence 466777777665 57888888889999999999999999985
No 401
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=83.40 E-value=9.7 Score=35.07 Aligned_cols=95 Identities=21% Similarity=0.218 Sum_probs=60.3
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-C---C-CCCCchhhHH-HHHHHHHHcc--CCCcEEEec
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A---R-QLDYVPATIM-ALEEVVKATQ--GRIPVFLDG 261 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G---~-~~~~g~~~~~-~l~~i~~~~~--~~~~via~G 261 (344)
.++++...-+.|+++=++-+.-.|+.+.++|+++|.+|+.+ + . ..|.++-+++ .+..++...+ .++||++|.
T Consensus 8 ~Lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~ 87 (302)
T 3fa4_A 8 SLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADA 87 (302)
T ss_dssp HHHHHHHSTTCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEEC
T ss_pred HHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEEC
Confidence 34555443345777778889999999999999999997531 1 0 1344444443 3333332222 279999987
Q ss_pred --CCCCHHHHH----HHHHcCCCEEEEch
Q 019244 262 --GVRRGTDVF----KALALGASGIFIGR 284 (344)
Q Consensus 262 --GIr~g~dv~----kalalGAd~V~ig~ 284 (344)
|..+..++. +....||.+|-+--
T Consensus 88 d~Gyg~~~~v~~tv~~l~~aGaagv~iED 116 (302)
T 3fa4_A 88 DTGYGGPIMVARTTEQYSRSGVAAFHIED 116 (302)
T ss_dssp TTTTSSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEECC
Confidence 555555544 34458999997754
No 402
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=83.36 E-value=2.8 Score=39.72 Aligned_cols=87 Identities=10% Similarity=0.019 Sum_probs=63.4
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHc-CCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~-G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+. |+++|--- ..+..++.+.++++.. ++||
T Consensus 170 d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPI 239 (382)
T 2gdq_A 170 DVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLEEP--------LPFDQPQDYAMLRSRL--SVPV 239 (382)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEEECC--------SCSSCHHHHHHHHTTC--SSCE
T ss_pred HHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEEECC--------CCcccHHHHHHHHhhC--CCCE
Confidence 446789999887 588888753 466665 445566 77766411 1123567777777655 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 258 FLDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
++++.+.+..|+.+++..| +|.|++-
T Consensus 240 a~dE~~~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 240 AGGENMKGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred EecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999987 7988874
No 403
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=83.35 E-value=8.5 Score=35.55 Aligned_cols=96 Identities=21% Similarity=0.229 Sum_probs=60.9
Q ss_pred HHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-C---C-CCCCchhhHHH-HHHHHHHcc--C-CCcEEE
Q 019244 189 KDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A---R-QLDYVPATIMA-LEEVVKATQ--G-RIPVFL 259 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G---~-~~~~g~~~~~~-l~~i~~~~~--~-~~~via 259 (344)
..++++...-+.|+++=++.+.-.|+.+.++|+|+|.+|+.+ + . ..|.++-+++. +..++...+ . ++||++
T Consensus 14 ~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~Pvia 93 (307)
T 3lye_A 14 KKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIA 93 (307)
T ss_dssp HHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEE
T ss_pred HHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEE
Confidence 345555444346787878889999999999999999997532 1 0 13445444433 333332222 2 499999
Q ss_pred ec--CCCCHHHHH----HHHHcCCCEEEEch
Q 019244 260 DG--GVRRGTDVF----KALALGASGIFIGR 284 (344)
Q Consensus 260 ~G--GIr~g~dv~----kalalGAd~V~ig~ 284 (344)
|. |..+..++. +....||.+|-+--
T Consensus 94 D~d~Gyg~~~~v~~~v~~l~~aGaagv~iED 124 (307)
T 3lye_A 94 DMDTGYGGPIMVARTVEHYIRSGVAGAHLED 124 (307)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ECCCCCCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 76 555555544 34558999997753
No 404
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=83.34 E-value=2.2 Score=41.17 Aligned_cols=88 Identities=9% Similarity=-0.099 Sum_probs=65.2
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ +.++.+..- .+.++| +.+.+.|+++|---- .+..++.+.++++.. .+||+
T Consensus 212 d~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~--------~~~d~~~~~~l~~~~--~iPIa 281 (424)
T 3v3w_A 212 IPDVFAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDAV--------PAENQESFKLIRQHT--TTPLA 281 (424)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCS--------CCSSTTHHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCC--------ChHhHHHHHHHHhhC--CCCEE
Confidence 345689999987 578888753 466664 556678888885211 112455677777766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 282 ~dE~~~~~~~~~~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 282 VGEVFNSIHDCRELIQNQWIDYIRTTI 308 (424)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EccCcCCHHHHHHHHHcCCCCeEeecc
Confidence 999999999999999988 78888764
No 405
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=83.29 E-value=7.4 Score=36.68 Aligned_cols=91 Identities=16% Similarity=0.190 Sum_probs=61.9
Q ss_pred HHHHHHhc-CCcEEEEee------cCHHHHHHHHHcCCcEEEEcc----CCCCCCC------------------------
Q 019244 191 VKWLQTIT-KLPILVKGV------LTAEDARIAVQAGAAGIIVSN----HGARQLD------------------------ 235 (344)
Q Consensus 191 i~~i~~~~-~~PvivK~v------~~~~~a~~~~~~G~d~I~v~~----~gG~~~~------------------------ 235 (344)
++++.+.. +.|.+..+- .+.+..+++.++|+++|++.- .|-|..|
T Consensus 112 ~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~ 191 (352)
T 3sgz_A 112 LEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKP 191 (352)
T ss_dssp HHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC--------
T ss_pred HHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccc
Confidence 44444444 367788763 233557889999999998852 1222100
Q ss_pred ---------CchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 236 ---------YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 236 ---------~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
....+++.+..+++.. ++||++-| +.+.+|+.++..+|||++.+..
T Consensus 192 ~~~~~~~~~d~~~~w~~i~~lr~~~--~~PvivK~-v~~~e~A~~a~~~GaD~I~vsn 246 (352)
T 3sgz_A 192 TQSVPVLFPKASFCWNDLSLLQSIT--RLPIILKG-ILTKEDAELAMKHNVQGIVVSN 246 (352)
T ss_dssp -------CCCTTCCHHHHHHHHHHC--CSCEEEEE-ECSHHHHHHHHHTTCSEEEECC
T ss_pred cchhhhhccCCCCCHHHHHHHHHhc--CCCEEEEe-cCcHHHHHHHHHcCCCEEEEeC
Confidence 0123567788888776 78998854 6889999999999999999853
No 406
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=83.29 E-value=0.72 Score=39.69 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=30.8
Q ss_pred HHHHHHHHhcCCcEEEEe-ecCHHHHHHHHHcCCcEEEEcc
Q 019244 189 KDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~-v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
+.++++ +++|+++.| +.+.|++.. .++||++|..|+
T Consensus 142 ~~I~~v---~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~ 178 (188)
T 1vkf_A 142 KVARKI---PGRTVIAAGLVETEEEARE-ILKHVSAISTSS 178 (188)
T ss_dssp HHHTTS---TTSEEEEESCCCSHHHHHH-HTTTSSEEEECC
T ss_pred HHHHHh---cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCC
Confidence 456666 689999988 479999999 999999999876
No 407
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=83.19 E-value=0.87 Score=39.54 Aligned_cols=44 Identities=23% Similarity=0.292 Sum_probs=38.1
Q ss_pred CCcHHHHHHHHHhcC-CcEEEEeecCHHHHHHHHHcCCcEEEEcc
Q 019244 185 SLSWKDVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~-~PvivK~v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.+.|+.++++++..+ +|+++-+..+++++..+.++|+++|.++.
T Consensus 157 ~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 157 VQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp CCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSEEEESH
T ss_pred ccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCEEEEhH
Confidence 357899999998887 99998887779999999999999999953
No 408
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=83.07 E-value=6.6 Score=36.92 Aligned_cols=119 Identities=19% Similarity=0.231 Sum_probs=69.4
Q ss_pred HHHHHHHhcCCcEEEEee--cCHHHHHHHHHc---CCcEEEEc-------------------cCCCCCCCCchhhHHHHH
Q 019244 190 DVKWLQTITKLPILVKGV--LTAEDARIAVQA---GAAGIIVS-------------------NHGARQLDYVPATIMALE 245 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v--~~~~~a~~~~~~---G~d~I~v~-------------------~~gG~~~~~g~~~~~~l~ 245 (344)
...++...++.||.+|.. .+++++..++.+ .=.++-+. -.|++..+.-...+..+.
T Consensus 171 ~hr~~asg~~~PVg~Kngt~g~i~~~l~Ai~aa~~~h~fl~~~~~G~~~~v~t~GN~~~~lilRG~~~~ny~~~di~~~~ 250 (350)
T 1n8f_A 171 VHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVK 250 (350)
T ss_dssp HHHHHHHTCSSCEEEECCTTCCSHHHHHHHHHHTSCCEEEEECTTSBEEEEEECCCSCEEEEECCSSSCCCSHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEecCCCCCHHHHHHHHHHHhCCceeeeeCCCCcEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHH
Confidence 566666778999999987 456776555322 21122111 124443223233455555
Q ss_pred HHHHHccCCCc--EEEec-----CCC------CHHHHHHHHHcCC---CEEEEchHH-------------HHHhh----h
Q 019244 246 EVVKATQGRIP--VFLDG-----GVR------RGTDVFKALALGA---SGIFIGRPV-------------VYSLA----A 292 (344)
Q Consensus 246 ~i~~~~~~~~~--via~G-----GIr------~g~dv~kalalGA---d~V~ig~~~-------------l~~~~----~ 292 (344)
++.+.. .+| |+.|- +=. -..+++.+++.|+ +++|+-+-+ -||.+ |
T Consensus 251 ~~l~~~--~lp~~VivD~SH~ns~k~~~~Q~~vv~~laa~ia~G~~~i~GlmiEshl~dG~Q~l~~~~~l~yG~SITD~C 328 (350)
T 1n8f_A 251 EGLNKA--GLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDAC 328 (350)
T ss_dssp HHHHHT--TCCCCEEEECSGGGTTTCGGGHHHHHHHHHHHHHTTCCSEEEEEEEBCSSSBBCCSSSCSCCCTTCBSSSCB
T ss_pred HHHHHc--CCCCeEEEECCCcccCccccccHHHHHHHHHHHHcCCCcccEEEEEeccCCCCcCCCCCccccCCCcCcccc
Confidence 433333 578 99853 222 2345888899999 999997643 33332 5
Q ss_pred cChHHHHHHHHHHHHHHH
Q 019244 293 EGEKGVRRVLEMLREEFE 310 (344)
Q Consensus 293 ~G~~~v~~~l~~l~~el~ 310 (344)
-|.+.-+.+|+.+.+.++
T Consensus 329 i~w~~t~~ll~~la~~~~ 346 (350)
T 1n8f_A 329 IGWEDTDALLRQLANAVK 346 (350)
T ss_dssp BCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 577777777777766654
No 409
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=83.03 E-value=5.9 Score=36.95 Aligned_cols=83 Identities=24% Similarity=0.322 Sum_probs=55.2
Q ss_pred HHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEcc--------CCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC
Q 019244 194 LQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 265 (344)
Q Consensus 194 i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~--------~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~ 265 (344)
+.+..+.-+|+ -+.+++.|+.+.++|+++|.+-+ .||... ..+.+.+.++++++ ++||++==-|..
T Consensus 12 ~~~~~kgGvI~-d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~ar---m~~p~~i~~I~~av--~iPV~~K~rig~ 85 (330)
T 2yzr_A 12 FAKMVKHGVVM-DVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVAR---MSDPALIEEIMDAV--SIPVMAKCRIGH 85 (330)
T ss_dssp HHHTTTTSEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCCCC---CCCHHHHHHHHHHC--SSCEEEEEETTC
T ss_pred HHHHccCCcee-eCCHHHHHHHHHHcCCCEEEecCCccccccCCcchhh---cCCHHHHHHHHHhc--CCCeEEEEeecc
Confidence 34445667777 67889999999999999995532 233111 34567788888887 799997554433
Q ss_pred HHHHHHHHHcCCCEEEE
Q 019244 266 GTDVFKALALGASGIFI 282 (344)
Q Consensus 266 g~dv~kalalGAd~V~i 282 (344)
-.++--.-++|||++-.
T Consensus 86 ~~e~qilea~GaD~Id~ 102 (330)
T 2yzr_A 86 TTEALVLEAIGVDMIDE 102 (330)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHHcCCCEEeh
Confidence 33322233499999864
No 410
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=83.00 E-value=5.5 Score=38.16 Aligned_cols=88 Identities=10% Similarity=0.098 Sum_probs=65.1
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHHH----HHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a~----~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.+ +.++.+-.- .+.++|. .+.+.|+++|---- ..+..++.+.++++.. .+||+
T Consensus 199 d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~-------~~~~~~~~~~~l~~~~--~iPIa 269 (410)
T 3dip_A 199 GLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGVLWVEDPI-------AKMDNIPAVADLRRQT--RAPIC 269 (410)
T ss_dssp HHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEECCB-------SCTTCHHHHHHHHHHH--CCCEE
T ss_pred HHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCC-------CCcccHHHHHHHHhhC--CCCEE
Confidence 356789999988 478887643 5677654 45567888886310 1123567777787766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
++..+.+..|+.+++..| +|.|++-
T Consensus 270 ~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 270 GGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred ecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 999999999999999997 7999884
No 411
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=82.91 E-value=3 Score=40.09 Aligned_cols=88 Identities=17% Similarity=0.117 Sum_probs=65.4
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.+ ++++.+..- .+.++| +.+.+.|+++|--- ..+..++.+.++++.. .+||+
T Consensus 187 d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP--------~~~~d~~~~~~l~~~~--~iPIa 256 (412)
T 4e4u_A 187 CELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLEKYDPLWFEEP--------VPPGQEEAIAQVAKHT--SIPIA 256 (412)
T ss_dssp HHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECC--------SCSSCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCcEEECC--------CChhhHHHHHHHHhhC--CCCEE
Confidence 345788999987 478888653 466664 45667888888521 1123567778887765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
++..+.+..|+.+++..| +|.|++--
T Consensus 257 ~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 257 TGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred ecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999988 78888753
No 412
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=82.90 E-value=2.7 Score=37.79 Aligned_cols=78 Identities=22% Similarity=0.280 Sum_probs=47.9
Q ss_pred HcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC-HHHHHHHHHcCCC----E--EEEchHHHHHh
Q 019244 218 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGAS----G--IFIGRPVVYSL 290 (344)
Q Consensus 218 ~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~-g~dv~kalalGAd----~--V~ig~~~l~~~ 290 (344)
++|.++++++.+ ..+.+..+++.+++ .+++ +=||+- +.+..+++..|+| . +.+|||++.+
T Consensus 168 ~~g~~GvV~~at----------~~~e~~~ir~~~~~-~~~l-~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A- 234 (255)
T 3qw3_A 168 VNGNVGLVVGAT----------DPVALARVRARAPT-LWFL-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARA- 234 (255)
T ss_dssp GGSCEEEEECSS----------CHHHHHHHHHHCSS-CCEE-ECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTS-
T ss_pred hhCCeEEEECCC----------CHHHHHHHHHHCCC-CeEE-ECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCC-
Confidence 379999998532 12345666666653 4454 455653 3456677888999 3 8999999874
Q ss_pred hhcChHHHHHHHHHHHHHHHHHH
Q 019244 291 AAEGEKGVRRVLEMLREEFELAM 313 (344)
Q Consensus 291 ~~~G~~~v~~~l~~l~~el~~~m 313 (344)
.. .....+.+++|+....
T Consensus 235 --~d---p~~aa~~i~~~i~~~~ 252 (255)
T 3qw3_A 235 --AD---PRAAAKELCEEINAIR 252 (255)
T ss_dssp --SC---HHHHHHHHHHHHHHHH
T ss_pred --CC---HHHHHHHHHHHHHHHH
Confidence 11 2345566677776543
No 413
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=82.86 E-value=7.4 Score=36.64 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=60.0
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHH
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 269 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv 269 (344)
.+.+.++..++|++. .+.+.+.+..+.+.|++.+.|... -...+..|..+.+ -..|||.+-|..|-+++
T Consensus 82 ~L~~~~~~~Gi~~~s-t~fD~~svd~l~~~~v~~~KI~S~-------~~~N~pLL~~va~---~gKPviLstGmstl~Ei 150 (350)
T 3g8r_A 82 KLVAEMKANGFKAIC-TPFDEESVDLIEAHGIEIIKIASC-------SFTDWPLLERIAR---SDKPVVASTAGARREDI 150 (350)
T ss_dssp HHHHHHHHTTCEEEE-EECSHHHHHHHHHTTCCEEEECSS-------STTCHHHHHHHHT---SCSCEEEECTTCCHHHH
T ss_pred HHHHHHHHcCCcEEe-ccCCHHHHHHHHHcCCCEEEECcc-------cccCHHHHHHHHh---hCCcEEEECCCCCHHHH
Confidence 455556666888763 568899999999999999999532 1345567776653 36899999999999999
Q ss_pred HHHHH----cCCCEEE
Q 019244 270 FKALA----LGASGIF 281 (344)
Q Consensus 270 ~kala----lGAd~V~ 281 (344)
..|+. .|-+.+.
T Consensus 151 ~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 151 DKVVSFMLHRGKDLTI 166 (350)
T ss_dssp HHHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHcCCCEEE
Confidence 88765 3666444
No 414
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=82.80 E-value=2 Score=41.49 Aligned_cols=87 Identities=14% Similarity=-0.055 Sum_probs=64.4
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.. .+||++
T Consensus 207 ~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPIa~ 276 (418)
T 3r4e_A 207 PKLFEELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLEDC--------TPAENQEAFRLVRQHT--VTPLAV 276 (418)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEESC--------SCCSSGGGGHHHHHHC--CSCEEE
T ss_pred HHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECC--------CCccCHHHHHHHHhcC--CCCEEE
Confidence 45689999987 578888753 466664 55667888888521 1112345566777766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
++.+.+..|+.+++..| +|.|++--
T Consensus 277 dE~~~~~~~~~~~l~~~a~d~v~~k~ 302 (418)
T 3r4e_A 277 GEIFNTIWDAKDLIQNQLIDYIRATV 302 (418)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred cCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 99999999999999987 79888764
No 415
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=82.76 E-value=2.7 Score=40.34 Aligned_cols=88 Identities=11% Similarity=-0.007 Sum_probs=64.3
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.+ ++++.+..- .+.++| +.+.+.|+++|--- ..+..++.+.++++.. ++||+
T Consensus 164 d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP--------~~~~d~~~~~~l~~~~--~iPIa 233 (405)
T 3rr1_A 164 AVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEP--------VLAEQAETYARLAAHT--HLPIA 233 (405)
T ss_dssp HHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGGGCCSCEECS--------SCCSSTHHHHHHHTTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CCcccHHHHHHHHhcC--CCCEE
Confidence 345788999887 578888753 466664 45667788887521 1122456677776655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
+++.+.+..|+.+++..| +|.|++--
T Consensus 234 ~dE~i~~~~~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 234 AGERMFSRFDFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp ECTTCCSHHHHHHHHHHCCCSEECCBT
T ss_pred ecCCcCCHHHHHHHHHHhCCCeEEECh
Confidence 999999999999999987 78888753
No 416
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=82.60 E-value=5.3 Score=36.41 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=0.0
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHH----HHHHHHcCCcEEEEccCCCCCCCCch--hhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~--~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++++ ..+++||++|..+ ++++ +..+...|-+-+.+.-.|++. .... ..+..++.+++... .+||+
T Consensus 118 n~~ll~~~-a~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~-~~~~~~~dl~~i~~lk~~~~-~~pV~ 194 (280)
T 2qkf_A 118 QTDLVVAM-AKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF-GYDNLVVDMLGFGVMKQTCG-NLPVI 194 (280)
T ss_dssp BHHHHHHH-HHTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHHHTT-TCCEE
T ss_pred CHHHHHHH-HcCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHHhCC-CCCEE
Q ss_pred E-----------ecCCCCH------HHHHHHHHcCCCEEEEchHHH------HHhhhcChHHHHHHHHHHHH
Q 019244 259 L-----------DGGVRRG------TDVFKALALGASGIFIGRPVV------YSLAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 259 a-----------~GGIr~g------~dv~kalalGAd~V~ig~~~l------~~~~~~G~~~v~~~l~~l~~ 307 (344)
. +||-..+ .=...++++||++++|-+.+- -+-..-..+.+.++++.++.
T Consensus 195 ~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~~d~al~D~~~sl~p~~l~~lv~~i~~ 266 (280)
T 2qkf_A 195 FDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKA 266 (280)
T ss_dssp EEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC----------------CCHHHHHHHHHHH
T ss_pred EECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCCcccCCCccccCCCHHHHHHHHHHHHH
No 417
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=82.53 E-value=3.2 Score=39.46 Aligned_cols=87 Identities=8% Similarity=-0.051 Sum_probs=63.3
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|-= ...+..++.+.++++.+ ++||+
T Consensus 196 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa 265 (392)
T 1tzz_A 196 DRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYEE--------VGDPLDYALQAALAEFY--PGPMA 265 (392)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEEEC--------CSCTTCHHHHHHHTTTC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCeecC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 445688898877 478887643 466654 4455678887741 01123566777776554 79999
Q ss_pred EecCCCCHHHHHHHHHcC-----CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-----ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-----Ad~V~ig 283 (344)
+++.+.+..|+.+++..| +|.|++-
T Consensus 266 ~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik 295 (392)
T 1tzz_A 266 TGENLFSHQDARNLLRYGGMRPDRDWLQFD 295 (392)
T ss_dssp ECTTCCSHHHHHHHHHHSCCCTTTCEECCC
T ss_pred ECCCCCCHHHHHHHHHcCCCccCCcEEEEC
Confidence 999999999999999998 8999885
No 418
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=82.48 E-value=4.1 Score=38.92 Aligned_cols=87 Identities=15% Similarity=0.113 Sum_probs=64.1
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.+ ++||+
T Consensus 196 ~~e~v~avRea~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEeP--------~~~~d~~~~~~l~~~~--~iPIa 265 (410)
T 2qq6_A 196 MVARVAAVREAVGPEVEVAIDMHGRFDIPSSIRFARAMEPFGLLWLEEP--------TPPENLDALAEVRRST--STPIC 265 (410)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC--------SCTTCHHHHHHHHTTC--SSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCeEECC--------CChhhHHHHHHHHhhC--CCCEE
Confidence 346788899887 478887743 466664 44667788877521 1123567777777655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
+++.+.+..++.+++..| +|.|++-
T Consensus 266 ~dE~~~~~~~~~~~i~~~~~d~v~ik 291 (410)
T 2qq6_A 266 AGENVYTRFDFRELFAKRAVDYVMPD 291 (410)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999987 7998884
No 419
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=82.39 E-value=2.2 Score=37.38 Aligned_cols=90 Identities=10% Similarity=-0.017 Sum_probs=58.8
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCH-HHHHHHHHcCCcEEEEccCCCCCCCCchhh-HHHHHHHHHHccCCCcEEEecCC
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPVFLDGGV 263 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~-~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~-~~~l~~i~~~~~~~~~via~GGI 263 (344)
..+.++.+++.++.|+.+... .++ +.++.+.++|+|+|++ |++.. ... ...+..+++. .+.++.+=.-
T Consensus 52 ~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~v--H~~~~----~~~~~~~~~~i~~~---g~~igv~~~p 122 (228)
T 1h1y_A 52 GAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTF--HIEVS----RDNWQELIQSIKAK---GMRPGVSLRP 122 (228)
T ss_dssp CHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEE--EGGGC----TTTHHHHHHHHHHT---TCEEEEEECT
T ss_pred CHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEE--CCCCc----ccHHHHHHHHHHHc---CCCEEEEEeC
Confidence 457889999888777775554 232 3478888999999999 43321 122 3344444332 4556665555
Q ss_pred CCHHHHHHHHHc---CCCEEEEchH
Q 019244 264 RRGTDVFKALAL---GASGIFIGRP 285 (344)
Q Consensus 264 r~g~dv~kalal---GAd~V~ig~~ 285 (344)
.+..+.++.+.- ++|.|.+++-
T Consensus 123 ~t~~e~~~~~~~~~~~~d~vl~~sv 147 (228)
T 1h1y_A 123 GTPVEEVFPLVEAENPVELVLVMTV 147 (228)
T ss_dssp TSCGGGGHHHHHSSSCCSEEEEESS
T ss_pred CCCHHHHHHHHhcCCCCCEEEEEee
Confidence 677777777766 9999999653
No 420
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=82.25 E-value=31 Score=31.76 Aligned_cols=109 Identities=26% Similarity=0.320 Sum_probs=74.2
Q ss_pred cCHHHHHHHH-HcCCcEEEEcc---CCCCCCCCchh--hHHHHHHHHHHccCCCcEEEecCC------------------
Q 019244 208 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPA--TIMALEEVVKATQGRIPVFLDGGV------------------ 263 (344)
Q Consensus 208 ~~~~~a~~~~-~~G~d~I~v~~---~gG~~~~~g~~--~~~~l~~i~~~~~~~~~via~GGI------------------ 263 (344)
.+|++|+... +.|+|.+-++- ||-+..+ +.| .++.|.+|.+.+ ++|+..=||=
T Consensus 153 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~-g~p~L~~~~L~~I~~~~--~vpLVlHGgSsv~~~~~~~~~~~gg~~~ 229 (305)
T 1rvg_A 153 TNPEEARIFMERTGADYLAVAIGTSHGAYKGK-GRPFIDHARLERIARLV--PAPLVLHGASAVPPELVERFRASGGEIG 229 (305)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCSS-SSCCCCHHHHHHHHHHC--CSCEEECSCCCCCHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCC-CCCccCHHHHHHHHHhc--CCCEEEeCCCCCcHHHHHHHHhhccccc
Confidence 5688887766 58999999873 5544221 333 467899999888 5999997754
Q ss_pred ---C-CHHHHHHHHHcCCCEEEEchHHHHHhhh-------cC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 019244 264 ---R-RGTDVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 319 (344)
Q Consensus 264 ---r-~g~dv~kalalGAd~V~ig~~~l~~~~~-------~G-----~-~~v~~~l~~l~~el~~~m~~~G~~ 319 (344)
. .-+++.|++.+|..=|-+++-+-++... .. + .-+....+.+++.++..|..+|+.
T Consensus 230 ~~~G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 302 (305)
T 1rvg_A 230 EAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSV 302 (305)
T ss_dssp SCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 3567889999999999999977554321 11 1 112333456777777788888764
No 421
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=82.12 E-value=7.4 Score=37.30 Aligned_cols=94 Identities=18% Similarity=0.075 Sum_probs=60.6
Q ss_pred HHHHHHHHHhcC--CcEEEEeecCH----HHHHHHHHc--CCcEEEEccCCCCCCCCchhhHHHHHHHHHHc---c-CCC
Q 019244 188 WKDVKWLQTITK--LPILVKGVLTA----EDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKAT---Q-GRI 255 (344)
Q Consensus 188 ~~~i~~i~~~~~--~PvivK~v~~~----~~a~~~~~~--G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~---~-~~~ 255 (344)
.+.++..++.++ .++++ ++-|. +++..+.+. |+|+|-+++...+ .| ...+...++++.+ + .++
T Consensus 197 ~~A~~~~~~~~p~~~~~~v-lvDT~d~~~~~al~~a~~l~~~d~IrlDs~~~~---~g-d~~~~v~~v~~~ld~~G~~~~ 271 (398)
T 2i1o_A 197 EEAWKLTLENTKNGQKSVL-LIDTYMDEKFAAIKIAEMFDKVDYIRLDTPSSR---RG-NFEALIREVRWELALRGRSDI 271 (398)
T ss_dssp HHHHHHHHHTCCTTSCCEE-ECCSSSCHHHHHHHHHTTCSCCCEEEECCCGGG---CS-CHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHhCCCCCCEEE-EEcCchHHHHHHHHHHHhhcCCcEEEeCCCCCC---cc-cHHHHHHHHHHHHHhCCCCce
Confidence 456777777775 34433 45443 444444444 9999999875311 01 1233444444332 2 268
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEEchHHH
Q 019244 256 PVFLDGGVRRGTDVFKALALGASGIFIGRPVV 287 (344)
Q Consensus 256 ~via~GGIr~g~dv~kalalGAd~V~ig~~~l 287 (344)
.|++||||. ...+.+..+.|+|.+++|+.+.
T Consensus 272 ~I~aSggl~-~~~i~~l~~~GvD~~gvGt~l~ 302 (398)
T 2i1o_A 272 KIMVSGGLD-ENTVKKLREAGAEAFGVGTSIS 302 (398)
T ss_dssp EEEEESSCC-HHHHHHHHHTTCCEEEECHHHH
T ss_pred EEEEeCCCC-HHHHHHHHHcCCCEEEeCcccC
Confidence 999999995 7888888889999999999765
No 422
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=81.83 E-value=3.2 Score=40.11 Aligned_cols=87 Identities=17% Similarity=0.006 Sum_probs=64.6
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .++++| +.+.+.|+++|--- ..+..++.+.++++.. .+||++
T Consensus 209 ~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPIa~ 278 (422)
T 3tji_A 209 VEMFHALREKYGWKLHILHDVHERLFPQQAVQLAKQLEPFQPYFIEDI--------LPPQQSAWLEQVRQQS--CVPLAL 278 (422)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECC--------SCGGGGGGHHHHHHHC--CCCEEE
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEECC--------CChhhHHHHHHHHhhC--CCCEEE
Confidence 45689999987 578888753 466665 45567788888521 1123455677777766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
++.+.+..|+.+++..| +|.|++--
T Consensus 279 dE~~~~~~~~~~ll~~ga~d~v~~k~ 304 (422)
T 3tji_A 279 GELFNNPAEWHDLIVNRRIDFIRCHV 304 (422)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECCCG
T ss_pred eCCcCCHHHHHHHHhcCCCCEEecCc
Confidence 99999999999999987 78888754
No 423
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=81.79 E-value=4.7 Score=38.40 Aligned_cols=87 Identities=10% Similarity=0.031 Sum_probs=64.2
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhh-HHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~-~~~l~~i~~~~~~~~~v 257 (344)
+.+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|-=- ..+.. ++.+.++++.. .+||
T Consensus 185 d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP--------~~~~d~~~~~~~l~~~~--~iPI 254 (392)
T 3ddm_A 185 DVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQLDWLEEP--------LRADRPAAEWAELAQAA--PMPL 254 (392)
T ss_dssp HHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC--------SCTTSCHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCCCEEECC--------CCccchHHHHHHHHHhc--CCCE
Confidence 345688999987 578888753 466664 45667788888521 11223 67778887766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 258 FLDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
.+++.+.+..|+.+++..| +|.|++-
T Consensus 255 a~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 255 AGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp EECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999999999987 6888774
No 424
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A
Probab=81.78 E-value=6.6 Score=36.71 Aligned_cols=100 Identities=15% Similarity=0.145 Sum_probs=67.7
Q ss_pred cHHH---HHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCCCC-----c--------hhhHHHHHHHHHH
Q 019244 187 SWKD---VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDY-----V--------PATIMALEEVVKA 250 (344)
Q Consensus 187 ~~~~---i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~~~-----g--------~~~~~~l~~i~~~ 250 (344)
+|+- ++.+.+..++++-+=.+.|.+.+..+.++|+..|-.. -||-.|| | -|.+..+.++.+.
T Consensus 143 T~eGi~A~~~L~~e~GI~vNvTliFS~~Qa~aaa~AGa~~iSpF--VgRidd~~~~~~g~~~~~~~~d~gv~~v~~iy~~ 220 (331)
T 2e1d_A 143 TWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPF--VGRILDWHVANTDKKSYEPQGDPGVKSVTKIYNY 220 (331)
T ss_dssp SHHHHHHHHHHHHHHCCCEEEEEECSHHHHHHHHHHTCSEEEEB--SHHHHHHHHHHSSCCCCCGGGCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCceeEeeeCCHHHHHHHHHcCCcEEEec--ccHHHHHHHhhcCcccccccCCHHHHHHHHHHHH
Confidence 5664 4555443388888888999999999999999988663 3332221 1 2234444444443
Q ss_pred c---cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhh
Q 019244 251 T---QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 291 (344)
Q Consensus 251 ~---~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~ 291 (344)
. ..+..|+ .-.+|+..+|.. ..|+|.+-|.-.++..+.
T Consensus 221 y~~~~~~T~v~-~AS~r~~~~V~~--LaG~d~vTipp~~l~~l~ 261 (331)
T 2e1d_A 221 YKKFGYKTIVM-GASFRNTGEIKA--LAGCDFLTISPKLLGELL 261 (331)
T ss_dssp HHHTTCCCEEE-EBCCSSHHHHHT--TTTSSEEEECHHHHHHHH
T ss_pred HHHcCCCeEEe-ccCcCCHHHHHH--hhCCCEEECCHHHHHHHH
Confidence 3 2234444 466999999997 579999998888887765
No 425
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=81.51 E-value=2.8 Score=40.10 Aligned_cols=89 Identities=15% Similarity=-0.029 Sum_probs=64.3
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
..+.++.+|+.+ ++++.+..- .+.++| +.+.+.|+++|--- ..+..++.+.++++.. .+||+
T Consensus 187 d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP--------~~~~~~~~~~~l~~~~--~iPIa 256 (401)
T 3sbf_A 187 TLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEVEQYKPYFIEDI--------LPPNQTEWLDNIRSQS--SVSLG 256 (401)
T ss_dssp HHHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEECS--------SCTTCGGGHHHHHTTC--CCCEE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CChhHHHHHHHHHhhC--CCCEE
Confidence 345789999987 588888754 466665 45567788887521 1112345566666654 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+++.+.+..|+.+++..| +|.|++--.
T Consensus 257 ~dE~~~~~~~~~~~i~~~~~d~v~~k~~ 284 (401)
T 3sbf_A 257 LGELFNNPEEWKSLIANRRIDFIRCHVS 284 (401)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCGG
T ss_pred eCCccCCHHHHHHHHhcCCCCEEecCcc
Confidence 999999999999999987 788887643
No 426
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=81.35 E-value=4 Score=37.11 Aligned_cols=88 Identities=19% Similarity=0.141 Sum_probs=52.6
Q ss_pred HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHH----HHHcCCCEEEEchHHHHH
Q 019244 214 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYS 289 (344)
Q Consensus 214 ~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~k----alalGAd~V~ig~~~l~~ 289 (344)
+.+++. +++|.+.|+-|-.. .. +.+--.++.+.+..++|||+--|=.+-.++++ |-.+|||++++-.|+++.
T Consensus 26 ~~li~~-v~gl~v~GttGE~~--~L-s~~Er~~v~~~~~~rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 101 (283)
T 2pcq_A 26 QALEPL-VDGLLVYGSNGEGV--HL-TPEERARGLRALRPRKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPRYYH 101 (283)
T ss_dssp HHHGGG-SSCCEETCTTTTGG--GS-CHHHHHHHHHTCCCSSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCTTG
T ss_pred HHHHhh-CCEEEECCcCcCch--hc-CHHHHHHHHHHHHhCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCcCCC
Confidence 446678 99999876544211 11 12222233333323899987555444555543 344799999999999875
Q ss_pred hhhcChHHHHHHHHHHHH
Q 019244 290 LAAEGEKGVRRVLEMLRE 307 (344)
Q Consensus 290 ~~~~G~~~v~~~l~~l~~ 307 (344)
.. .++++.++++.+.+
T Consensus 102 ~~--~~~~l~~~f~~va~ 117 (283)
T 2pcq_A 102 GS--LGAGLLRYYEALAE 117 (283)
T ss_dssp GG--TTTHHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHHHhc
Confidence 31 35677777766654
No 427
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=81.24 E-value=1.9 Score=38.05 Aligned_cols=41 Identities=17% Similarity=0.262 Sum_probs=34.9
Q ss_pred cHHHHHHHHHhcCCcEEEEeec-CHHHHHHHHHcCCcEEEEc
Q 019244 187 SWKDVKWLQTITKLPILVKGVL-TAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~-~~~~a~~~~~~G~d~I~v~ 227 (344)
.++.++++++.+++|+++-+.. +.+++..+.++|+|+++|+
T Consensus 179 ~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 179 AYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEc
Confidence 3567899999889999987754 5599999999999999985
No 428
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=81.10 E-value=6.9 Score=37.00 Aligned_cols=90 Identities=23% Similarity=0.309 Sum_probs=60.2
Q ss_pred HHHHHhc-CCcEEEEee------cCHHHHHHHHHcCCcEEEEccC----CCCC--------CC-----------------
Q 019244 192 KWLQTIT-KLPILVKGV------LTAEDARIAVQAGAAGIIVSNH----GARQ--------LD----------------- 235 (344)
Q Consensus 192 ~~i~~~~-~~PvivK~v------~~~~~a~~~~~~G~d~I~v~~~----gG~~--------~~----------------- 235 (344)
+++++.. +.|+++..- .+.+.++++.++|+++|++.-. |.|. +.
T Consensus 124 e~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~ 203 (368)
T 2nli_A 124 EEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGM 203 (368)
T ss_dssp HHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC
T ss_pred HHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCc
Confidence 3444433 578888763 2345678899999999987531 1110 00
Q ss_pred ---------CchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 236 ---------YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 236 ---------~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
....+++.+..+++.. ++||++= |+.+.+|+.++..+|||++.+..
T Consensus 204 ~l~~~~~~~d~~~~~~~i~~lr~~~--~~PvivK-~v~~~e~a~~a~~~Gad~I~vs~ 258 (368)
T 2nli_A 204 SLNNIYGASKQKISPRDIEEIAGHS--GLPVFVK-GIQHPEDADMAIKRGASGIWVSN 258 (368)
T ss_dssp -----CTTBCSBCCHHHHHHHHHHS--SSCEEEE-EECSHHHHHHHHHTTCSEEEECC
T ss_pred hHHhhhhccCchhhHHHHHHHHHHc--CCCEEEE-cCCCHHHHHHHHHcCCCEEEEcC
Confidence 0112456677777766 6899886 47899999999999999999953
No 429
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=81.09 E-value=3.1 Score=37.22 Aligned_cols=41 Identities=7% Similarity=0.119 Sum_probs=33.8
Q ss_pred cHHHHHHHHHhc-----CCcEEEEeecCHHHHHHHHHcCCcEEEEc
Q 019244 187 SWKDVKWLQTIT-----KLPILVKGVLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 187 ~~~~i~~i~~~~-----~~PvivK~v~~~~~a~~~~~~G~d~I~v~ 227 (344)
.++.|+++|+.. ++++.|=+..+++.+..+.++|||.++++
T Consensus 178 ~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~G 223 (246)
T 3inp_A 178 MLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAG 223 (246)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEES
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEe
Confidence 567777777653 47888888888999999999999999884
No 430
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=80.91 E-value=39 Score=32.07 Aligned_cols=63 Identities=21% Similarity=0.254 Sum_probs=42.0
Q ss_pred CCCcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCC-------------CCCCchh-------hHHH
Q 019244 184 RSLSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR-------------QLDYVPA-------TIMA 243 (344)
Q Consensus 184 ~~~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~-------------~~~~g~~-------~~~~ 243 (344)
...+.++|+++.+.+ .+-|++|.++|.|+|-+.+.-|+ ...+|.+ .++.
T Consensus 160 r~mt~~eI~~ii~~F-----------~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEV 228 (400)
T 4gbu_A 160 HSLTKDEIKQYIKEY-----------VQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEV 228 (400)
T ss_dssp EECCHHHHHHHHHHH-----------HHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHH
T ss_pred ccCCHHHHHHHHHHH-----------HHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHH
Confidence 345788888888865 46789999999999999653332 1223322 4566
Q ss_pred HHHHHHHccCCCcEE
Q 019244 244 LEEVVKATQGRIPVF 258 (344)
Q Consensus 244 l~~i~~~~~~~~~vi 258 (344)
+..|++.++.+ +|.
T Consensus 229 i~aVr~~vg~d-~vg 242 (400)
T 4gbu_A 229 VDALVEAIGHE-KVG 242 (400)
T ss_dssp HHHHHHHHCGG-GEE
T ss_pred HHHHHHHcCCC-cEE
Confidence 77777777544 553
No 431
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=80.69 E-value=1.9 Score=39.14 Aligned_cols=40 Identities=28% Similarity=0.217 Sum_probs=34.1
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~~ 228 (344)
..+.++++++.+++||++.+- .++++++.+ .|+|+++|.+
T Consensus 190 ~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 190 VKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp CHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred HHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 356799999988999999876 569999997 9999999953
No 432
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=80.55 E-value=5.1 Score=37.73 Aligned_cols=88 Identities=10% Similarity=-0.020 Sum_probs=64.2
Q ss_pred cHHHHHHHHHhcC--CcEEEEee--cCHHH----HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTITK--LPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~--~PvivK~v--~~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.++ +++.+..- .+.++ ++.+.+.|+++|-= ...+..++.+.++++.. .+||.
T Consensus 174 d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPia 243 (370)
T 1chr_A 174 DLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGVELIEQ--------PVGRENTQALRRLSDNN--RVAIM 243 (370)
T ss_dssp HHHHHHHHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTTTEEEEEC--------CSCTTCHHHHHHHHHHS--CSEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEE
Confidence 4456888999883 78888753 34444 45566778877741 11123466777887766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
++.-+.+..|+.+++..| +|.|++--
T Consensus 244 ~dE~~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 244 ADESLSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp ESSSCCSHHHHHHHHTTTSCSEEEECT
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 999999999999999986 89998854
No 433
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=80.49 E-value=21 Score=33.76 Aligned_cols=154 Identities=18% Similarity=0.254 Sum_probs=83.2
Q ss_pred CHHHHHHHHHHHHHcCCcEEEeccCCccccccHHHHHhhcCCCCccccccccc---ccccccccccchhhHHH---Hhhc
Q 019244 108 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG---LDLGKMDEANDSGLAAY---VAGQ 181 (344)
Q Consensus 108 d~~~~~~~i~~a~~ag~~~l~~tvd~~~~g~r~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~ 181 (344)
+++...+.+++..+.||+++-+.++...--.+-+.+|..+ |. ... .++. ..... +.. ...+.++ ...+
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~~~~d~~~v~avR~~~--~~-~~l-~vDaN~~~~~~~-A~~-~~~l~~~~i~~iEe 222 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIAPGRDRAAIKAVRLRY--PD-LAI-AADANGSYRPED-APV-LRQLDAYDLQFIEQ 222 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECBTTBSHHHHHHHHHHC--TT-SEE-EEECTTCCCGGG-HHH-HHHGGGGCCSCEEC
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHC--CC-CeE-EEECCCCCChHH-HHH-HHHHhhCCCcEEEC
Confidence 3676666677777789999887765221112334445443 21 111 0110 00000 000 0001110 0012
Q ss_pred CCCCCcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEcc--CCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 182 IDRSLSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVSN--HGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 182 ~~~~~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~~--~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
+-+..+++..+++++.+++||..-+. .+..+.+.+++.| +|.|.+.- .|| ......+..+++.. .+++
T Consensus 223 P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GG------it~~~~ia~~A~~~--gi~~ 294 (388)
T 3qld_A 223 PLPEDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGG------FGATLRALDVAGEA--GMAA 294 (388)
T ss_dssp CSCTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTS------HHHHHHHHHHHHHT--TCEE
T ss_pred CCCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCC------HHHHHHHHHHHHHC--CCeE
Confidence 22333678899999999999998775 5788999888876 68777642 233 33333344444444 6888
Q ss_pred EEecCCCCHHHHHHHHHc
Q 019244 258 FLDGGVRRGTDVFKALAL 275 (344)
Q Consensus 258 ia~GGIr~g~dv~kalal 275 (344)
...+-+.++--.+-++.+
T Consensus 295 ~~~~~~es~i~~aa~~~l 312 (388)
T 3qld_A 295 WVGGMYETGVGRVHGLIA 312 (388)
T ss_dssp EECCCCCCHHHHHHHHHH
T ss_pred EecCccchHHHHHHHHHH
Confidence 776666666555544444
No 434
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=80.39 E-value=15 Score=34.18 Aligned_cols=84 Identities=18% Similarity=0.167 Sum_probs=54.2
Q ss_pred cCCcEEEEee--cCHHHH-HHHHHcCCcEEEEccCCCCC-C-CCchh----hHHHHHHHHHHccCCCcEEEe--cCCCCH
Q 019244 198 TKLPILVKGV--LTAEDA-RIAVQAGAAGIIVSNHGARQ-L-DYVPA----TIMALEEVVKATQGRIPVFLD--GGVRRG 266 (344)
Q Consensus 198 ~~~PvivK~v--~~~~~a-~~~~~~G~d~I~v~~~gG~~-~-~~g~~----~~~~l~~i~~~~~~~~~via~--GGIr~g 266 (344)
.+.|+++..- .+++.. +.+..+|+|+|.+......+ . ..+.+ .++.+.++++.. ++||++- |...+.
T Consensus 115 ~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~~ 192 (349)
T 1p0k_A 115 PNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMSK 192 (349)
T ss_dssp SSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCCH
T ss_pred CCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCCH
Confidence 3688887654 455554 44557899998775321110 0 01111 346677777766 6899885 444678
Q ss_pred HHHHHHHHcCCCEEEEc
Q 019244 267 TDVFKALALGASGIFIG 283 (344)
Q Consensus 267 ~dv~kalalGAd~V~ig 283 (344)
+++.++..+|||+|.+.
T Consensus 193 ~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 99999999999999985
No 435
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=80.02 E-value=34 Score=30.89 Aligned_cols=83 Identities=13% Similarity=0.210 Sum_probs=53.8
Q ss_pred HHHHHHHhcCCcEEEEee-------cCHHHHHHHHH-c-CCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEe
Q 019244 190 DVKWLQTITKLPILVKGV-------LTAEDARIAVQ-A-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v-------~~~~~a~~~~~-~-G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~ 260 (344)
..+.|.+.+++||++=.+ ++++...++.+ . .+-+|+-+. | .+..+.++++..++++.|+ +
T Consensus 117 ~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s~--g--------d~~~~~~~~~~~~~~f~v~-~ 185 (292)
T 2vc6_A 117 HFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVXDAT--G--------NLLRPSLERMACGEDFNLL-T 185 (292)
T ss_dssp HHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS--C--------CTHHHHHHHHHSCTTSEEE-E
T ss_pred HHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEecCC--C--------CHHHHHHHHHHcCCCEEEE-E
Confidence 456777778999998653 67888887776 3 355555432 1 2233445555555566664 5
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHH
Q 019244 261 GGVRRGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 261 GGIr~g~dv~kalalGAd~V~ig~~~ 286 (344)
| +...++.++++||+.+.-+..-
T Consensus 186 G---~d~~~~~~l~~G~~G~is~~~n 208 (292)
T 2vc6_A 186 G---EDGTALGYMAHGGHGCISVTAN 208 (292)
T ss_dssp S---CGGGHHHHHHTTCCEEEESGGG
T ss_pred C---chHHHHHHHHcCCCEEEecHHH
Confidence 5 2445778899999998887653
No 436
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=79.78 E-value=3.5 Score=39.82 Aligned_cols=87 Identities=16% Similarity=0.162 Sum_probs=62.8
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCC-CcE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR-IPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~-~~v 257 (344)
..+.++.+|+.+ ++++.+..- .+.+++ +.+.+.|+++|--- ..+..++.+.++++.. + +||
T Consensus 215 d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~~iPI 284 (428)
T 3bjs_A 215 DIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWLEEP--------FACNDFASYREVAKIT--PLVPI 284 (428)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCEECC--------SCTTCHHHHHHHTTTC--SSSCE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CCccCHHHHHHHHHhC--CCCcE
Confidence 345688899887 578887743 456554 55778888877421 1123566777776554 5 999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 258 FLDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
++++.+.+..|+.+++..| +|.|++-
T Consensus 285 a~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 285 AAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp EECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred EcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 9999999999999999987 6888774
No 437
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=79.48 E-value=40 Score=31.38 Aligned_cols=86 Identities=20% Similarity=0.151 Sum_probs=57.6
Q ss_pred CCcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecC
Q 019244 185 SLSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 262 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GG 262 (344)
..+|+..+++++.+++||..-+. .+.++++.+++.| +|.|.+.-. .-+|......+..+++.. .++++..+.
T Consensus 225 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~----~~GGit~~~~i~~~A~~~--g~~~~~~~~ 298 (375)
T 1r0m_A 225 WDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVA----RVGGHAESRRVHDVAQSF--GAPVWCGGM 298 (375)
T ss_dssp TTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTT----TTTSHHHHHHHHHHHHHT--TCCEEECCC
T ss_pred cccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcc----hhcCHHHHHHHHHHHHHc--CCcEEecCc
Confidence 34678899999999999988775 5789999888777 888877431 112344333344444444 688888777
Q ss_pred CCCHHHHHHHHHcC
Q 019244 263 VRRGTDVFKALALG 276 (344)
Q Consensus 263 Ir~g~dv~kalalG 276 (344)
..++.-..-++.+.
T Consensus 299 ~es~i~~aa~~hla 312 (375)
T 1r0m_A 299 LESGIGRAHNIHLS 312 (375)
T ss_dssp CCCHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHH
Confidence 77766655444443
No 438
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=79.46 E-value=4.1 Score=38.49 Aligned_cols=88 Identities=6% Similarity=0.011 Sum_probs=64.9
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cC-HHHHH----HHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LT-AEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~-~~~a~----~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
+.+.++.+|+.+ +.++.+..- .+ .++|. .+.+.|+++|-=- ..+..++.+.++++.. .+||
T Consensus 179 d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iEqP--------~~~~~~~~~~~l~~~~--~iPI 248 (374)
T 3sjn_A 179 DYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWIEEP--------VLADSLISYEKLSRQV--SQKI 248 (374)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEEECS--------SCTTCHHHHHHHHHHC--SSEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEEECC--------CCcccHHHHHHHHhhC--CCCE
Confidence 445688999987 578888753 56 76654 4556788877521 1123567788887766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 258 FLDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
++++-+.+..|+.+++..| +|.|++--
T Consensus 249 a~dE~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 249 AGGESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp EECTTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999999875 78888754
No 439
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=79.18 E-value=12 Score=35.78 Aligned_cols=91 Identities=12% Similarity=0.042 Sum_probs=66.1
Q ss_pred CCcHHHHHHHHHhc--CCcEEEEee--cC---HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 185 SLSWKDVKWLQTIT--KLPILVKGV--LT---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 185 ~~~~~~i~~i~~~~--~~PvivK~v--~~---~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
..+.+.++.+|+.+ ++++.+..- .+ .+-++.+.+.|+++|-= ...+..++.+.++++.. .+||
T Consensus 189 ~~d~~~v~avR~a~G~~~~L~vDaN~~w~~~~~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI 258 (400)
T 3mwc_A 189 GWDVEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHEQ--------PLHYEALLDLKELGERI--ETPI 258 (400)
T ss_dssp TBSHHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHHHGGGCCSCEES--------CSCTTCHHHHHHHHHHS--SSCE
T ss_pred chHHHHHHHHHHhcCCCCEEEEeCCCCCCHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHhhC--CCCE
Confidence 34567899999987 478888742 23 34456666778877741 11223567777887766 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 258 FLDGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
.++.-+.+..|+.+++..| +|.|++--.
T Consensus 259 a~dE~~~~~~~~~~~~~~~~~d~v~~k~~ 287 (400)
T 3mwc_A 259 CLDESLISSRVAEFVAKLGISNIWNIKIQ 287 (400)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred EEeCCcCCHHHHHHHHhcCCCCEEEEcch
Confidence 9999999999999999987 788888643
No 440
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=79.05 E-value=1.9 Score=37.26 Aligned_cols=44 Identities=11% Similarity=0.171 Sum_probs=38.4
Q ss_pred CCcHHHHHHHHHh--cCCcEEEEeecCHHHHHHHHHcCCcEEEEcc
Q 019244 185 SLSWKDVKWLQTI--TKLPILVKGVLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 185 ~~~~~~i~~i~~~--~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.+.|+.++++++. .++||+.=+..+++++..+.++|+++|.|++
T Consensus 128 ~~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~Ga~gVav~s 173 (210)
T 3ceu_A 128 TYTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFGFGGAVVLG 173 (210)
T ss_dssp CCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTTCSEEEESH
T ss_pred CCCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhCCCEEEEhH
Confidence 4678899999887 5899998887889999999999999999964
No 441
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=78.78 E-value=5.6 Score=38.56 Aligned_cols=88 Identities=9% Similarity=-0.069 Sum_probs=64.4
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHHH----HHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a~----~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .++++|. .+.+.|+++|-=- ..+..++.+.++++.. .+||.+
T Consensus 227 ~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP--------~~~~d~~~~~~l~~~~--~iPIa~ 296 (440)
T 3t6c_A 227 PRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLEDP--------VAPENTEWLKMLRQQS--STPIAM 296 (440)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECS--------SCGGGGGGHHHHHHHC--CSCEEE
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEECC--------CChhhHHHHHHHHhhc--CCCEEe
Confidence 45688999988 578888764 5666654 4556788877521 1122455677777766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+.-+.+..|+.+++..| +|.|++--.
T Consensus 297 dE~~~~~~~~~~~i~~~a~d~v~~k~~ 323 (440)
T 3t6c_A 297 GELFVNVNEWKPLIDNKLIDYIRCHIS 323 (440)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCGG
T ss_pred CcccCCHHHHHHHHHcCCccceeechh
Confidence 99999999999999987 788887643
No 442
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=78.77 E-value=6.6 Score=37.06 Aligned_cols=88 Identities=13% Similarity=0.026 Sum_probs=63.2
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHH----HHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~----~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .+.+ -++.+.+.|+++|-=- ..+..++.+.++++.. .+||.+
T Consensus 178 ~~~v~avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~ipIa~ 247 (377)
T 3my9_A 178 LRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQP--------VPRRHLDAMAGFAAAL--DTPILA 247 (377)
T ss_dssp HHHHHHHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCCSCEECC--------SCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCEEECC--------CCccCHHHHHHHHHhC--CCCEEE
Confidence 45688888887 478887753 2333 3556677788877421 1123467777887766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+.-+.+..|+.+++..| +|.|++--.
T Consensus 248 dE~~~~~~~~~~~i~~~~~d~v~~k~~ 274 (377)
T 3my9_A 248 DESCFDAVDLMEVVRRQAADAISVKIM 274 (377)
T ss_dssp STTCSSHHHHHHHHHHTCCSEEECCHH
T ss_pred CCccCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999999999987 788887543
No 443
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=78.72 E-value=7.3 Score=36.48 Aligned_cols=89 Identities=16% Similarity=0.142 Sum_probs=62.5
Q ss_pred CCcHHHHHHHHHhc--CCcEEEEee--cCHHH---HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcE
Q 019244 185 SLSWKDVKWLQTIT--KLPILVKGV--LTAED---ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 257 (344)
Q Consensus 185 ~~~~~~i~~i~~~~--~~PvivK~v--~~~~~---a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~v 257 (344)
.+..+.++.+|+.+ ++++.+..- .+.++ ++.+.+.|+++|-= ...+..++.+.++++.. ++||
T Consensus 167 ~~~~e~v~avr~~~g~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~ipI 236 (368)
T 1sjd_A 167 GWDVEPVRAVRERFGDDVLLQVDANTAYTLGDAPQLARLDPFGLLLIEQ--------PLEEEDVLGHAELARRI--QTPI 236 (368)
T ss_dssp TBSHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHTTGGGCCSEEEC--------CSCTTCHHHHHHHHTTC--SSCE
T ss_pred hhHHHHHHHHHHhcCCCceEEEeccCCCCHHHHHHHHHHHhcCCCeEeC--------CCChhhHHHHHHHHHhC--CCCE
Confidence 45677899999887 477766532 23333 34455678877641 01123566777776655 7999
Q ss_pred EEecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 258 FLDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 258 ia~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
++++.+.+..|+.+++..| +|.|++-
T Consensus 237 a~dE~~~~~~~~~~~i~~~~~d~v~ik 263 (368)
T 1sjd_A 237 CLDESIVSARAAADAIKLGAVQIVNIK 263 (368)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred EECCCcCCHHHHHHHHHcCCCCEEEec
Confidence 9999999999999999987 7999883
No 444
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=78.69 E-value=4.2 Score=36.82 Aligned_cols=95 Identities=21% Similarity=0.206 Sum_probs=55.9
Q ss_pred cHHHHHHHHHhcCCcEEEEeec--CHHH----HHHHHHcCCcEEEEccCCCCCCCCch--hhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~--~~~~----a~~~~~~G~d~I~v~~~gG~~~~~g~--~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++++. .+++||++|..+ ++++ +..+...|-.-+.+.-.|++ ..... -.+..++.+++. . ||+
T Consensus 107 n~~ll~~~a-~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~-~~y~~~~~dl~~i~~lk~~---~-pVi 180 (267)
T 2nwr_A 107 QTDLLLAAA-KTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTT-FGYNNLVVDFRSLPIMKQW---A-KVI 180 (267)
T ss_dssp CHHHHHHHH-TTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEE-CSSSCEECCTTHHHHHTTT---S-EEE
T ss_pred CHHHHHHHH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC-CCCCccccCHHHHHHHHHc---C-CEE
Confidence 455677774 579999999874 5544 44556788766655544442 11111 133345544432 3 999
Q ss_pred Ee---------------cCCCCH-HH-HHHHHHcCCCEEEEchHHH
Q 019244 259 LD---------------GGVRRG-TD-VFKALALGASGIFIGRPVV 287 (344)
Q Consensus 259 a~---------------GGIr~g-~d-v~kalalGAd~V~ig~~~l 287 (344)
.| +|-+.- .+ +..++++||++++|-+.+-
T Consensus 181 vD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~~ 226 (267)
T 2nwr_A 181 YDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPE 226 (267)
T ss_dssp EETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEESC
T ss_pred EcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecCC
Confidence 87 443221 23 3356789999999987653
No 445
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=78.68 E-value=22 Score=33.48 Aligned_cols=84 Identities=11% Similarity=0.056 Sum_probs=55.9
Q ss_pred CCcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecC
Q 019244 185 SLSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 262 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GG 262 (344)
..+++..+++++.+++||..-+. .+.++++.+++.| +|.|.+.-. .-+|+.....+..+++.. .+++...+-
T Consensus 231 ~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~----~~GGit~~~~ia~~A~~~--gi~~~~~~~ 304 (383)
T 3i4k_A 231 ADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTT----KHGGLLESKKIAAIAEAG--GLACHGATS 304 (383)
T ss_dssp TTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTT----TTTSHHHHHHHHHHHHHT--TCEEEECCS
T ss_pred hhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEccc----ccCCHHHHHHHHHHHHHc--CCeEEeCCC
Confidence 34688899999999999998775 6789999988877 788877531 112344444444444444 688877665
Q ss_pred CCCHHHHHHHHH
Q 019244 263 VRRGTDVFKALA 274 (344)
Q Consensus 263 Ir~g~dv~kala 274 (344)
..++--..-++.
T Consensus 305 ~es~i~~aa~~h 316 (383)
T 3i4k_A 305 LEGPIGTAASLQ 316 (383)
T ss_dssp CCCHHHHHHHHH
T ss_pred CccHHHHHHHHH
Confidence 556555444443
No 446
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=78.68 E-value=3.7 Score=38.97 Aligned_cols=82 Identities=16% Similarity=0.057 Sum_probs=53.4
Q ss_pred CCcEEEEee--cCHHHHHHHH-HcCCcEEEEccCCCC---CC--CCch-hhHHHHHHHHHHccCCCcEEEecCC---CCH
Q 019244 199 KLPILVKGV--LTAEDARIAV-QAGAAGIIVSNHGAR---QL--DYVP-ATIMALEEVVKATQGRIPVFLDGGV---RRG 266 (344)
Q Consensus 199 ~~PvivK~v--~~~~~a~~~~-~~G~d~I~v~~~gG~---~~--~~g~-~~~~~l~~i~~~~~~~~~via~GGI---r~g 266 (344)
+.|++.-.. .+.+++.++. ..|+|++.+.-.... +. +... ..++.+.++++.. ++||++-+ + .+.
T Consensus 144 ~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~-vg~g~s~ 220 (365)
T 3sr7_A 144 HLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKE-VGFGMDV 220 (365)
T ss_dssp -CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEE-CSSCCCH
T ss_pred CCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEE-CCCCCCH
Confidence 456653322 4566665555 889999988532110 00 1111 1236777777766 79999974 6 688
Q ss_pred HHHHHHHHcCCCEEEEc
Q 019244 267 TDVFKALALGASGIFIG 283 (344)
Q Consensus 267 ~dv~kalalGAd~V~ig 283 (344)
+++.++..+|||+|.++
T Consensus 221 e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 221 KTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 99999999999999884
No 447
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=78.66 E-value=26 Score=31.63 Aligned_cols=88 Identities=28% Similarity=0.308 Sum_probs=56.8
Q ss_pred HHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-C-C--CCCCchhhHH----HHHHHHHHccCCCcEEEec-
Q 019244 191 VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A-R--QLDYVPATIM----ALEEVVKATQGRIPVFLDG- 261 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G-~--~~~~g~~~~~----~l~~i~~~~~~~~~via~G- 261 (344)
++++.+. + +.+=++.+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++ .+..|.+.. ++||++|.
T Consensus 10 lr~l~~~-~--i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~--~~pviaD~d 84 (275)
T 2ze3_A 10 FHALHQT-G--FLLPNAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAV--AIPVNADIE 84 (275)
T ss_dssp HHHHHHH-C--EEECEESSHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHC--SSCEEEECT
T ss_pred HHHHhhC-C--eeEecccCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhc--CCCEEeecC
Confidence 4444443 3 66666788899999999999999998531 1 0 1233443443 344455544 58999987
Q ss_pred -CCC-CHHHHH----HHHHcCCCEEEEc
Q 019244 262 -GVR-RGTDVF----KALALGASGIFIG 283 (344)
Q Consensus 262 -GIr-~g~dv~----kalalGAd~V~ig 283 (344)
|.. ++.++. +.+..||.+|-+-
T Consensus 85 ~Gyg~~~~~~~~~v~~l~~aGaagv~iE 112 (275)
T 2ze3_A 85 AGYGHAPEDVRRTVEHFAALGVAGVNLE 112 (275)
T ss_dssp TCSSSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 544 444443 4566899999874
No 448
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=78.58 E-value=23 Score=33.42 Aligned_cols=87 Identities=14% Similarity=0.195 Sum_probs=55.3
Q ss_pred HHHhc-CCcEEEEee-------cCHHHHHHHH-HcCCcEEEEccC--------CCCCCCCchhhHHHHHHHHHHccCCCc
Q 019244 194 LQTIT-KLPILVKGV-------LTAEDARIAV-QAGAAGIIVSNH--------GARQLDYVPATIMALEEVVKATQGRIP 256 (344)
Q Consensus 194 i~~~~-~~PvivK~v-------~~~~~a~~~~-~~G~d~I~v~~~--------gG~~~~~g~~~~~~l~~i~~~~~~~~~ 256 (344)
+|+.. +.|++.-.. .+++.++++. ..+++++.+.-. .|. .++....++.+.++++.+ ++|
T Consensus 113 vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~-~~~~~~~~~~i~~i~~~~--~vP 189 (368)
T 3vkj_A 113 VRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGE-PEYQIYALEKLRDISKEL--SVP 189 (368)
T ss_dssp HHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCC-CBCBTHHHHHHHHHHTTC--SSC
T ss_pred HHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCC-chhhHHHHHHHHHHHHHc--CCC
Confidence 44333 577775432 2457776644 357777776421 111 111112566777777655 799
Q ss_pred EEEe--cCCCCHHHHHHHHHcCCCEEEEc
Q 019244 257 VFLD--GGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 257 via~--GGIr~g~dv~kalalGAd~V~ig 283 (344)
|++- |+-.+..++.++..+|||+|-++
T Consensus 190 VivK~vG~g~s~~~A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 190 IIVKESGNGISMETAKLLYSYGIKNFDTS 218 (368)
T ss_dssp EEEECSSSCCCHHHHHHHHHTTCCEEECC
T ss_pred EEEEeCCCCCCHHHHHHHHhCCCCEEEEe
Confidence 9995 55568999999999999999884
No 449
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=78.45 E-value=2.8 Score=41.21 Aligned_cols=65 Identities=18% Similarity=0.167 Sum_probs=47.6
Q ss_pred HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 210 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
.+.+..+.+.|+|.+++++.+|+. ...++.+..+++.. .+|++ .|+|.+..++..++ |||.|.+|
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~----~~~L~~I~~l~~~~--~vpvi-~k~v~~~~~a~~l~--G~d~v~vg 294 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHN----LKAIKSMKEMRQKV--DADFI-VGNIANPKAVDDLT--FADAVKVG 294 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCC----HHHHHHHHHHHHTC--CSEEE-EEEECCHHHHTTCT--TSSEEEEC
T ss_pred HHHHHHHHHhcCCceEEEecCCcE----eehhhHHHHHHHHh--CCccc-cCCcCCHHHHHHhh--CCCeEEEe
Confidence 367888999999999998755531 22345566666554 68996 57888988876555 99999984
No 450
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=78.17 E-value=2.8 Score=39.59 Aligned_cols=42 Identities=12% Similarity=0.220 Sum_probs=36.9
Q ss_pred cHHHHHHHHHhcCCcEEEEeec-CHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTITKLPILVKGVL-TAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~-~~~~a~~~~~~G~d~I~v~~ 228 (344)
.|+.++++++..++||++-+-. +++++..+++.|+|+|.++.
T Consensus 196 ~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs 238 (369)
T 3bw2_A 196 LLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQLGT 238 (369)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 3888999998889999887765 99999999999999999953
No 451
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=78.01 E-value=5 Score=38.32 Aligned_cols=88 Identities=10% Similarity=0.009 Sum_probs=63.9
Q ss_pred cHHHHHHHHHhc--CCcEEEEee--cCHHHHH----HHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 187 SWKDVKWLQTIT--KLPILVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v--~~~~~a~----~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+.+.++.+|+.+ +.++.+-.- .+.++|. .+.+.|+++|--- ..+..++.+.++++.. .+||+
T Consensus 196 d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP--------~~~~~~~~~~~l~~~~--~iPIa 265 (400)
T 4dxk_A 196 ALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTFWHEDP--------IKMDSLSSLTRYAAVS--PAPIS 265 (400)
T ss_dssp HHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCSEEECC--------BCTTSGGGHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCCEEEcC--------CCcccHHHHHHHHHhC--CCCEE
Confidence 355788999987 478887643 5676654 4556788888631 1122445567777765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
++..+.+..|+.+++..| +|.|++--
T Consensus 266 ~dE~~~~~~~~~~~l~~~a~d~v~~d~ 292 (400)
T 4dxk_A 266 ASETLGSRWAFRDLLETGAAGVVMLDI 292 (400)
T ss_dssp ECTTCCHHHHHHHHHHTTCCCEEEECT
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999998 69998853
No 452
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=77.83 E-value=15 Score=34.16 Aligned_cols=42 Identities=26% Similarity=0.418 Sum_probs=33.5
Q ss_pred CcHHHHHHHHHhcCCcEEEEee-----------------------cCHHHHHHHHHcCCcEEEEc
Q 019244 186 LSWKDVKWLQTITKLPILVKGV-----------------------LTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v-----------------------~~~~~a~~~~~~G~d~I~v~ 227 (344)
++++.+++|++.+++|+++-+. .+.++.+++++.|+.-|-++
T Consensus 191 L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV~KiNi~ 255 (323)
T 2isw_A 191 LAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVD 255 (323)
T ss_dssp CCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEEC
T ss_pred cCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCCCeEEEEC
Confidence 6778889999888999998873 35677888888888877774
No 453
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=77.82 E-value=18 Score=31.84 Aligned_cols=77 Identities=21% Similarity=0.201 Sum_probs=51.1
Q ss_pred cEEEEee--cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHH-cCC
Q 019244 201 PILVKGV--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGA 277 (344)
Q Consensus 201 PvivK~v--~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kala-lGA 277 (344)
+..||.+ .++|+++ +.++|+|++-+--..++... -+.+...++.+.. ..++...|=..+..++.+.+. +|.
T Consensus 20 ~M~VKICGit~~ed~~-a~~~gaD~iGfIf~~~SpR~---V~~~~A~~i~~~~--~~~~~~v~v~v~~~ei~~~i~~~~l 93 (228)
T 4aaj_A 20 HMFVKICGIKSLEELE-IVEKHADATGVVVNSNSKRR---IPLEKAREIIENS--AIPVFLVSTMVGFSEWAMAIERTGA 93 (228)
T ss_dssp CCEEEECCCCSHHHHH-HHHTTCSEEEEECSSSSTTB---CCHHHHHHHHHHC--SSCEEEEECCCCHHHHHHHHHHHTC
T ss_pred ceEEEECCCCcHHHHH-HHHcCCCEEEEEecCCCCCC---CCHHHHHHHHHhh--CCCCEEEeccCchHHHHHHHHhccc
Confidence 4578886 6788886 67899999865332221111 1334445555554 567777776777888887765 799
Q ss_pred CEEEEc
Q 019244 278 SGIFIG 283 (344)
Q Consensus 278 d~V~ig 283 (344)
|.|++=
T Consensus 94 d~vQLH 99 (228)
T 4aaj_A 94 QYIQVH 99 (228)
T ss_dssp SEEEEC
T ss_pred hheecc
Confidence 999984
No 454
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=77.69 E-value=9 Score=37.06 Aligned_cols=87 Identities=23% Similarity=0.234 Sum_probs=57.0
Q ss_pred CCcEEEEeecCHHHHHHHHHcCCcEEEEccCC--------CC-CCCCchh----hHHHHHHHHHHcc-------------
Q 019244 199 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG--------AR-QLDYVPA----TIMALEEVVKATQ------------- 252 (344)
Q Consensus 199 ~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g--------G~-~~~~g~~----~~~~l~~i~~~~~------------- 252 (344)
+.|+.+=++.+.-.|+.+.++|.++|.+|+.+ +. ..|.+.- -...+.+|...+.
T Consensus 64 ~~~~~~~ga~d~~sA~~~~~aGf~Aiy~SG~~vAa~~~~s~~G~PD~~~~~~~ev~~~v~~I~~a~~~~d~~~~~~~~~~ 143 (429)
T 1f8m_A 64 LEWVNALGALTGNMAVQQVRAGLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTS 143 (429)
T ss_dssp SSCEEEEBCCSHHHHHHHHHTTCSCEEECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCS
T ss_pred CCceecCCCCCHHHHHHHHHcCCCEEEechHHHhcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 35777888899999999999999999998643 11 1233321 1234445544430
Q ss_pred --C-CCcEEEec--CCCCHHHHH----HHHHcCCCEEEEchH
Q 019244 253 --G-RIPVFLDG--GVRRGTDVF----KALALGASGIFIGRP 285 (344)
Q Consensus 253 --~-~~~via~G--GIr~g~dv~----kalalGAd~V~ig~~ 285 (344)
+ .+||++|+ |......+. +++.+||.+|.|---
T Consensus 144 ~~d~~~PIiaD~DtGfG~~~nv~~tvk~~i~AGaaGi~IEDq 185 (429)
T 1f8m_A 144 VENWLAPIVADGEAGFGGALNVYELQKALIAAGVAGSHWEDQ 185 (429)
T ss_dssp CSCSSCCEEEECTTTTSSHHHHHHHHHHHHHTTCSEEEEECB
T ss_pred cccCCCCEEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEecC
Confidence 1 38999976 666655443 345689999987643
No 455
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=77.61 E-value=15 Score=32.93 Aligned_cols=90 Identities=21% Similarity=0.239 Sum_probs=58.8
Q ss_pred HHHHHHhcCCcEEEEeecCHHHHHHHHHcCCcEEEEccCC-CC---CCCCchhhHH----HHHHHHHHccCCCcEEEec-
Q 019244 191 VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-AR---QLDYVPATIM----ALEEVVKATQGRIPVFLDG- 261 (344)
Q Consensus 191 i~~i~~~~~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~g-G~---~~~~g~~~~~----~l~~i~~~~~~~~~via~G- 261 (344)
++++.+. +-|+++=++-+.-.|+.+.++|+|.|.+++.+ +. ..|.++-+++ ....|.+.. ++||++|.
T Consensus 12 lr~l~~~-~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~~ 88 (255)
T 2qiw_A 12 FASDHES-GKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAV--SIPVSVDVE 88 (255)
T ss_dssp HHHHHHT-CCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHC--SSCEEEECT
T ss_pred HHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcC--CCCEEeccC
Confidence 4444432 56888777788899999999999999998621 10 1233333433 334444444 69999976
Q ss_pred -CCCC--HHHHHHHHHcCCCEEEEc
Q 019244 262 -GVRR--GTDVFKALALGASGIFIG 283 (344)
Q Consensus 262 -GIr~--g~dv~kalalGAd~V~ig 283 (344)
|..+ ...+.+.+..||++|-+-
T Consensus 89 ~Gyg~~~~~~~~~l~~aGa~gv~iE 113 (255)
T 2qiw_A 89 SGYGLSPADLIAQILEAGAVGINVE 113 (255)
T ss_dssp TCTTCCHHHHHHHHHHTTCCEEEEC
T ss_pred CCcCcHHHHHHHHHHHcCCcEEEEC
Confidence 4322 345666778999999874
No 456
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=77.49 E-value=6.3 Score=33.76 Aligned_cols=70 Identities=13% Similarity=0.021 Sum_probs=46.9
Q ss_pred HHHHHHHHHcCCcEEEEccC-CC--CCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHH-HHHHHHcCCCEEEEch
Q 019244 210 AEDARIAVQAGAAGIIVSNH-GA--RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD-VFKALALGASGIFIGR 284 (344)
Q Consensus 210 ~~~a~~~~~~G~d~I~v~~~-gG--~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~d-v~kalalGAd~V~ig~ 284 (344)
.+.++.+.+.|+|.+.+.-. |. +....| .+.+.++++.. +.|+.+.+.+++..+ +-.+..+|||.|.+..
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g---~~~i~~i~~~~--~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~ 92 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFG---ADVVASMRKHS--KLVFDCHLMVVDPERYVEAFAQAGADIMTIHT 92 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC---HHHHHHHHTTC--CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccC---HHHHHHHHHhC--CCCEEEEEeecCHHHHHHHHHHcCCCEEEEcc
Confidence 36678888999998655421 21 112223 34555555444 579999999998864 6667779999998864
No 457
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=77.43 E-value=9 Score=37.06 Aligned_cols=87 Identities=20% Similarity=0.222 Sum_probs=52.1
Q ss_pred CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCC---------CCCchhh----HHHHHHHHHHc--------------
Q 019244 199 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ---------LDYVPAT----IMALEEVVKAT-------------- 251 (344)
Q Consensus 199 ~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~---------~~~g~~~----~~~l~~i~~~~-------------- 251 (344)
+-|+.+=++.++-.|+.+.++|.++|.+|+.+=.. .|.+.-+ +..+.+|.+.+
T Consensus 60 ~~~l~~~ga~D~~sA~~~~~aGf~Aiy~SG~~vAa~~~~~~~G~PD~~~~~~~ev~~~v~rI~~a~~~~d~~~~~~~~~~ 139 (433)
T 3eol_A 60 EDFVNALGALSGNQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKRINRTLQRADQIETAEGKGL 139 (433)
T ss_dssp SSCEEEEBCSSHHHHHHHHHTTCCCEEEC-----------------------CHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCEEeCCCCcHHHHHHHHHhCCCEEEechHHHHhccchhcCCCCCCccCCHHHHHHHHHHHHHHHHHhhhhhhhhcccc
Confidence 57888889999999999999999999999853211 1222111 12334443332
Q ss_pred c--C-CCcEEEec--CCCCHHHHH----HHHHcCCCEEEEchH
Q 019244 252 Q--G-RIPVFLDG--GVRRGTDVF----KALALGASGIFIGRP 285 (344)
Q Consensus 252 ~--~-~~~via~G--GIr~g~dv~----kalalGAd~V~ig~~ 285 (344)
+ + .+||++|+ |..+...+. ++..+||.+|.|---
T Consensus 140 ~~~d~~lPIiaD~DtGfG~~~nv~rtVk~~~~AGaAGi~IEDQ 182 (433)
T 3eol_A 140 SVDTWFAPIVADAEAGFGDPLDAFEIMKAYIEAGAAGVHFEDQ 182 (433)
T ss_dssp SSSCSCCCEEEECC---CCHHHHHHHHHHHHHHTCSEEEEESB
T ss_pred cccCCCCCeEEECCCCCCCcHHHHHHHHHHHHcCCeEEEEecC
Confidence 0 1 59999976 555555544 344589999988653
No 458
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A
Probab=77.17 E-value=21 Score=33.33 Aligned_cols=100 Identities=15% Similarity=0.222 Sum_probs=68.3
Q ss_pred cHHHHHHHHHhc--CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCCCCC-------------CCchhhHHHHHHHHHHc
Q 019244 187 SWKDVKWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL-------------DYVPATIMALEEVVKAT 251 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG~~~-------------~~g~~~~~~l~~i~~~~ 251 (344)
+|+-++.++... ++++-+=.+.|.+.+..+.++|+..|-.. -||-. +.+.+.+..+.++.+..
T Consensus 156 T~eGi~A~~~L~~eGI~vNvTLiFS~~Qa~aaa~AGa~~iSpF--VgRi~D~~~~~~g~~~~~~~~~~Gv~~v~~iy~~y 233 (337)
T 3cwn_A 156 TWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPY--VGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYY 233 (337)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEB--SHHHHHHHHHHSSCCCCCGGGCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEeeeCCHHHHHHHHHcCCcEEEee--chhhhhhhhhccccccccccCcHHHHHHHHHHHHH
Confidence 576555544433 89998888999999999999999987653 34321 12234445555554443
Q ss_pred ---cCCCcEEEecCCCCHHHHHHHHHcCCCEEEEchHHHHHhh
Q 019244 252 ---QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 291 (344)
Q Consensus 252 ---~~~~~via~GGIr~g~dv~kalalGAd~V~ig~~~l~~~~ 291 (344)
..+. .+..-.+|+..+|.. ..|+|.+-+.-.++..+.
T Consensus 234 ~~~~~~T-~v~~AS~r~~~~V~~--LaG~d~~Tipp~~l~~l~ 273 (337)
T 3cwn_A 234 KEHGYET-VVMGASFRNIGEILE--LAGCDRLTIAPTLLKELA 273 (337)
T ss_dssp HHTTCCC-EEEEBCCSCHHHHHH--TTTSSEEEECHHHHHHHH
T ss_pred HHcCCCc-EEEeCccCCHHHHHH--hhCCCEEeCCHHHHHHHH
Confidence 2234 445566999999997 569999988888877664
No 459
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=76.90 E-value=2.7 Score=38.52 Aligned_cols=41 Identities=22% Similarity=0.281 Sum_probs=35.4
Q ss_pred cHHHHHHHHHhc--CCcEEEEe-ecCHHHHHHHHHcCCcEEEEc
Q 019244 187 SWKDVKWLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~-v~~~~~a~~~~~~G~d~I~v~ 227 (344)
.|+.++++++.+ ++||+.-+ +.+++++.+++.+|||+|.+.
T Consensus 228 ~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 228 ALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 477899999998 89987655 579999999999999999885
No 460
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=76.81 E-value=4.9 Score=36.79 Aligned_cols=68 Identities=22% Similarity=0.270 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEe-cCCCCHHHHHHHHHcCCCEEEEchHHHHH
Q 019244 211 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD-GGVRRGTDVFKALALGASGIFIGRPVVYS 289 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~-GGIr~g~dv~kalalGAd~V~ig~~~l~~ 289 (344)
+.++...++|||.|.+- ++++.+.+.++.+.+ ++|++.. +|-....+..+.-.+|.+.|..+...+++
T Consensus 172 ~Ra~ay~eAGAd~i~~e---------~~~~~~~~~~i~~~~--~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ra 240 (287)
T 3b8i_A 172 QRTLAYQEAGADGICLV---------GVRDFAHLEAIAEHL--HIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFA 240 (287)
T ss_dssp HHHHHHHHTTCSEEEEE---------CCCSHHHHHHHHTTC--CSCEEEECTTCGGGCCHHHHHHTTEEEEECCCHHHHH
T ss_pred HHHHHHHHcCCCEEEec---------CCCCHHHHHHHHHhC--CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 55788999999999983 246667778887777 5888742 33332334556667999999999888775
No 461
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=76.67 E-value=46 Score=30.84 Aligned_cols=84 Identities=23% Similarity=0.270 Sum_probs=56.8
Q ss_pred CCcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEcc--CCCCCCCCchhhHHHHHHHHHHccCCCcEEEe
Q 019244 185 SLSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVSN--HGARQLDYVPATIMALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 185 ~~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~~--~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~ 260 (344)
..+|+..+++++.+++||..-+. .+.++++.+++.| +|.|.+.- .|| ......+..+++.. .++++..
T Consensus 218 ~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG------it~~~~i~~~A~~~--g~~~~~~ 289 (369)
T 2zc8_A 218 YDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGG------HGESLRVHALAESA--GIPLWMG 289 (369)
T ss_dssp TTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTS------HHHHHHHHHHHHHT--TCCEEEC
T ss_pred cccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCC------HHHHHHHHHHHHHc--CCcEEec
Confidence 34678899999999999988775 5789999988887 78887742 133 33333334444443 6888887
Q ss_pred cCCCCHHHHHHHHHcC
Q 019244 261 GGVRRGTDVFKALALG 276 (344)
Q Consensus 261 GGIr~g~dv~kalalG 276 (344)
+...++.-..-++.+.
T Consensus 290 ~~~es~i~~aa~~hla 305 (369)
T 2zc8_A 290 GMLEAGVGRAHNLHLA 305 (369)
T ss_dssp CCCCCHHHHHHHHHHT
T ss_pred CccccHHHHHHHHHHH
Confidence 7777766555444443
No 462
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=75.96 E-value=3.7 Score=36.89 Aligned_cols=40 Identities=25% Similarity=0.273 Sum_probs=33.6
Q ss_pred HHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcCCcEEEEcc
Q 019244 188 WKDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.+.++++|+.+++||.+..- .+++++.. +..|+|+++|.+
T Consensus 195 ~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGS 235 (262)
T 2ekc_A 195 KKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGS 235 (262)
T ss_dssp HHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECH
T ss_pred HHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECH
Confidence 35789999988999999775 46999999 788999999953
No 463
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=75.70 E-value=4.6 Score=37.75 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=36.2
Q ss_pred CcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEE
Q 019244 186 LSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIV 226 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v 226 (344)
+.++.++++++.+++||+.-+- .++++++.+++.| +|.|.+
T Consensus 264 ~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 264 YQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp TTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred ccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 4678899999999999988664 6899999999999 999987
No 464
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=75.62 E-value=2.9 Score=38.11 Aligned_cols=40 Identities=28% Similarity=0.334 Sum_probs=34.6
Q ss_pred HHHHHHHHHhcCCcEEEEe-ecCHHHHHHHHHcCCcEEEEc
Q 019244 188 WKDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~-v~~~~~a~~~~~~G~d~I~v~ 227 (344)
++.++++++.+++||+.-+ +.+++++.+++++|||+|.+.
T Consensus 230 ~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 4678899998899998755 568999999999999999884
No 465
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=75.60 E-value=2 Score=37.91 Aligned_cols=42 Identities=21% Similarity=0.302 Sum_probs=36.1
Q ss_pred cHHHHHHHHHhc-----CCcEEEEeecCHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTIT-----KLPILVKGVLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~-----~~PvivK~v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.++.++++++.. ++|+.+-+..+.+.+..+.++|+|++++..
T Consensus 156 ~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGS 202 (230)
T 1tqj_A 156 VLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGS 202 (230)
T ss_dssp GHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESH
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECH
Confidence 567788888877 799999888888999999999999999853
No 466
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=75.40 E-value=2.1 Score=37.30 Aligned_cols=41 Identities=24% Similarity=0.301 Sum_probs=33.6
Q ss_pred HHHHHHHHHhc-----CCcEEEEeecCHHHHHHHHHcCCcEEEEcc
Q 019244 188 WKDVKWLQTIT-----KLPILVKGVLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 188 ~~~i~~i~~~~-----~~PvivK~v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
++.++++++.+ ++|+++-+..+++.+..+.++|+|+++|+.
T Consensus 163 ~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~vvvgS 208 (230)
T 1rpx_A 163 VKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGS 208 (230)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESH
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEEEECh
Confidence 35677788766 789888877788999889999999999953
No 467
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=75.25 E-value=18 Score=33.32 Aligned_cols=44 Identities=16% Similarity=0.369 Sum_probs=30.8
Q ss_pred CCCcHHHHHHHHHhcCCcEEEEee-----------------------cCHHHHHHHHHcCCcEEEEc
Q 019244 184 RSLSWKDVKWLQTITKLPILVKGV-----------------------LTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 184 ~~~~~~~i~~i~~~~~~PvivK~v-----------------------~~~~~a~~~~~~G~d~I~v~ 227 (344)
+.++++.+++|++..++|+++-+. .+.++.+++++.|+.-|-++
T Consensus 189 p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~ 255 (307)
T 3n9r_A 189 PKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTD 255 (307)
T ss_dssp CCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEEC
T ss_pred CccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCceEEEec
Confidence 345667777776666777777663 34677888888888888774
No 468
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=75.16 E-value=3.5 Score=38.48 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=36.4
Q ss_pred CcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEc
Q 019244 186 LSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVS 227 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~ 227 (344)
+.++.++++++.+++||++-+- .+++++..+++.| +|.|.++
T Consensus 264 ~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 264 YQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp TTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEEC
T ss_pred chHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeec
Confidence 4678899999999999987665 5899999999999 9999883
No 469
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=74.52 E-value=11 Score=35.30 Aligned_cols=89 Identities=22% Similarity=0.210 Sum_probs=62.3
Q ss_pred CCcHHHHHHHHHhc-CCcEEEEee--cCHHH---HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 185 SLSWKDVKWLQTIT-KLPILVKGV--LTAED---ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 185 ~~~~~~i~~i~~~~-~~PvivK~v--~~~~~---a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
....+.++.+|+.+ ++++.+..- .+.++ ++.+.+.|+++|-= ..-+..++.+.++++.. ++||.
T Consensus 174 ~~d~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~ipIa 243 (375)
T 1r0m_A 174 GWDVQPVRATREAFPDIRLTVDANSAYTLADAGRLRQLDEYDLTYIEQ--------PLAWDDLVDHAELARRI--RTPLC 243 (375)
T ss_dssp TBSHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHTTGGGCCSCEEC--------CSCTTCSHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHHHcCCCeEEEeCCCCCCHHHHHHHHHHHhCCCcEEEC--------CCCcccHHHHHHHHHhC--CCCEE
Confidence 34567788888877 577877642 23333 33445667777641 01123456677777766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
++..+.+..|+.+++..| +|.|++-
T Consensus 244 ~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 244 LDESVASASDARKALALGAGGVINLK 269 (375)
T ss_dssp ESTTCCSHHHHHHHHHHTSCSEEEEC
T ss_pred ecCccCCHHHHHHHHHhCCCCEEEEC
Confidence 999999999999999987 7999884
No 470
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=74.31 E-value=3.3 Score=37.92 Aligned_cols=41 Identities=24% Similarity=0.263 Sum_probs=35.4
Q ss_pred cHHHHHHHHHhc-CCcEEEEe-ecCHHHHHHHHHcCCcEEEEc
Q 019244 187 SWKDVKWLQTIT-KLPILVKG-VLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~-v~~~~~a~~~~~~G~d~I~v~ 227 (344)
.|+.++++++.+ ++||+.-+ +.+++++.+++.+|||+|.+.
T Consensus 231 ~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 231 ALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp HHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 367899999998 89988655 578999999999999999885
No 471
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=74.22 E-value=12 Score=34.88 Aligned_cols=89 Identities=10% Similarity=0.119 Sum_probs=62.0
Q ss_pred CCcHHHHHHHHHhc-CCcEEEEee--cCHHH---HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 185 SLSWKDVKWLQTIT-KLPILVKGV--LTAED---ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 185 ~~~~~~i~~i~~~~-~~PvivK~v--~~~~~---a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
....+.++.+|+.+ ++++.+-.- .+.++ ++.+.+.|+++|-=- .-+..++.+.++++.. ++||.
T Consensus 167 ~~d~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~ipIa 236 (369)
T 2zc8_A 167 GWDYEVLKAVREAFPEATLTADANSAYSLANLAQLKRLDELRLDYIEQP--------LAYDDLLDHAKLQREL--STPIC 236 (369)
T ss_dssp TBSHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHGGGGGCCSCEECC--------SCTTCSHHHHHHHHHC--SSCEE
T ss_pred hHHHHHHHHHHHHcCCCeEEEecCCCCCHHHHHHHHHHHhCCCcEEECC--------CCcccHHHHHHHHhhC--CCCEE
Confidence 34567788888877 577777532 23333 344456677766410 1123456677777765 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEEc
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFIG 283 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~ig 283 (344)
++.-+.+..|+.+++..| +|.|++-
T Consensus 237 ~dE~~~~~~~~~~~i~~~~~d~v~ik 262 (369)
T 2zc8_A 237 LDESLTGAEKARKAIELGAGRVFNVK 262 (369)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred EcCccCCHHHHHHHHHhCCCCEEEEc
Confidence 999999999999999988 7999884
No 472
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=74.05 E-value=29 Score=30.17 Aligned_cols=111 Identities=19% Similarity=0.221 Sum_probs=67.1
Q ss_pred HHHHHHHHHhcCCcEEEEee-cC----HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecC
Q 019244 188 WKDVKWLQTITKLPILVKGV-LT----AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 262 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v-~~----~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GG 262 (344)
.+.+++|++..+.||.+-.. .+ .++|+++.+.+-+ +.| .-|.|.+-++.+.......+++-+.-
T Consensus 41 ~~~~~eI~~~v~G~Vs~EV~a~d~e~mi~ea~~l~~~~~n-v~I---------KIP~T~eGl~A~~~L~~~GI~vn~Tl- 109 (212)
T 3r8r_A 41 HDRLREITDVVKGSVSAEVISLKAEEMIEEGKELAKIAPN-ITV---------KIPMTSDGLKAVRALTDLGIKTNVTL- 109 (212)
T ss_dssp HHHHHHHHHHCCSCEEEECCCSSHHHHHHHHHHHHTTCTT-EEE---------EEESSHHHHHHHHHHHHTTCCEEEEE-
T ss_pred HHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHHHhCCC-EEE---------EeCCCHHHHHHHHHHHHCCCcEEEEE-
Confidence 35688888888888876543 22 3567777777633 333 12445555544443333356666653
Q ss_pred CCCHHHHHHHHHcCCCEEEEchHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHhC
Q 019244 263 VRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSG 317 (344)
Q Consensus 263 Ir~g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~v~~~l~~l~~el~~~m~~~G 317 (344)
|.|..+++.|..+||+.|. ||+--+...|.+|+ .+..++..+....|
T Consensus 110 ifS~~Qa~~Aa~AGa~yIS---PfvgRi~d~~~dG~-----~~v~~i~~~~~~~~ 156 (212)
T 3r8r_A 110 IFNANQALLAARAGATYVS---PFLGRLDDIGHNGL-----DLISEVKQIFDIHG 156 (212)
T ss_dssp ECSHHHHHHHHHHTCSEEE---EBHHHHHHTTSCHH-----HHHHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHcCCeEEE---eccchhhhcCCChH-----HHHHHHHHHHHHcC
Confidence 8899999999999999873 34332333355555 24455666666555
No 473
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=74.01 E-value=9.5 Score=34.79 Aligned_cols=94 Identities=24% Similarity=0.314 Sum_probs=60.3
Q ss_pred HHHHHHHhc--CCcEEEEeecCHHHHHHHHHcCCcEEEEccCCC-----CC-----CCCchh---hHHHHHHHHHHccCC
Q 019244 190 DVKWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGA-----RQ-----LDYVPA---TIMALEEVVKATQGR 254 (344)
Q Consensus 190 ~i~~i~~~~--~~PvivK~v~~~~~a~~~~~~G~d~I~v~~~gG-----~~-----~~~g~~---~~~~l~~i~~~~~~~ 254 (344)
.++.+++.. +.|++--+.-+--.|+.+.+.|+|.|++-|.|- +. +..+-. ..+.-.++...++ +
T Consensus 16 il~~l~~~i~~~~~iig~gaGtGlsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~-~ 94 (286)
T 2p10_A 16 LVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVR-H 94 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSHHHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCS-S
T ss_pred HHHHHHHHHhcCCceEEEecccchhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCC-C
Confidence 477777665 689998888899999999999999999987542 21 111211 1222233333333 7
Q ss_pred CcEEEe-cC---CCCHHHHHHHHH-cCCCEEEEchH
Q 019244 255 IPVFLD-GG---VRRGTDVFKALA-LGASGIFIGRP 285 (344)
Q Consensus 255 ~~via~-GG---Ir~g~dv~kala-lGAd~V~ig~~ 285 (344)
+||++- .+ -++-.++++.|. +|+..| +=-|
T Consensus 95 iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~p 129 (286)
T 2p10_A 95 TPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFP 129 (286)
T ss_dssp SCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECS
T ss_pred CCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECC
Confidence 999982 11 234455567665 899999 5544
No 474
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=73.82 E-value=26 Score=32.31 Aligned_cols=85 Identities=21% Similarity=0.162 Sum_probs=60.8
Q ss_pred HHHHHHHHHhc-CCcEEEEee--cCHHHH----HHHHHcCCc--EEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 188 WKDVKWLQTIT-KLPILVKGV--LTAEDA----RIAVQAGAA--GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 188 ~~~i~~i~~~~-~~PvivK~v--~~~~~a----~~~~~~G~d--~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
.+.++.+|+.- ++++.+-.- .+.+++ +.+.+.|++ +|-= ...+..++.+.++++.. ++||+
T Consensus 170 ~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE~--------P~~~~~~~~~~~l~~~~--~ipia 239 (345)
T 2zad_A 170 IEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQ--------PVRREDIEGLKFVRFHS--PFPVA 239 (345)
T ss_dssp HHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEEC--------CSCTTCHHHHHHHHHHS--SSCEE
T ss_pred HHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeeeC--------CCCcccHHHHHHHHHhC--CCCEE
Confidence 45678888762 356665432 455554 557788888 7641 01123567778887766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEE
Q 019244 259 LDGGVRRGTDVFKALALG-ASGIFI 282 (344)
Q Consensus 259 a~GGIr~g~dv~kalalG-Ad~V~i 282 (344)
+++.+.+..|+.+++..| +|.|++
T Consensus 240 ~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 240 ADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred EeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 999999999999999988 799998
No 475
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=73.43 E-value=13 Score=35.08 Aligned_cols=66 Identities=27% Similarity=0.324 Sum_probs=50.5
Q ss_pred CHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 209 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 209 ~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
+.+.+..+.++|+|.|.++-. .....+++++|++.. ++||++|-=+ ++.-+++++..|+|.+=+--
T Consensus 48 tv~Qi~~l~~aG~diVRvavp-------~~~~a~al~~I~~~~--~vPlvaDiHf-~~~lal~a~e~G~dklRINP 113 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRVAVP-------HKEDVEALEEIVKKS--PMPVIADIHF-APSYAFLSMEKGVHGIRINP 113 (366)
T ss_dssp HHHHHHHHHHTTCCEEEEECC-------SHHHHHHHHHHHHHC--SSCEEEECCS-CHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHHcCCCEEEeCCC-------ChHHHHHHHHHHhcC--CCCEEEeCCC-CHHHHHHHHHhCCCeEEECC
Confidence 346678899999999999532 134567899998876 7999998544 46778889999999976653
No 476
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=73.10 E-value=12 Score=34.78 Aligned_cols=75 Identities=17% Similarity=0.119 Sum_probs=51.4
Q ss_pred HHHHHHHHcCCcEEEEc---cCCCCCCCCch---hhHHHHHHHHHHccCCCcEEEec--CCCCHHHHHHHHHcCCCEEEE
Q 019244 211 EDARIAVQAGAAGIIVS---NHGARQLDYVP---ATIMALEEVVKATQGRIPVFLDG--GVRRGTDVFKALALGASGIFI 282 (344)
Q Consensus 211 ~~a~~~~~~G~d~I~v~---~~gG~~~~~g~---~~~~~l~~i~~~~~~~~~via~G--GIr~g~dv~kalalGAd~V~i 282 (344)
+.++.+.++|+|.|-++ +.++...++++ ..++.+.++++.. .++++.+-+ |..+..++.++...|++.+-+
T Consensus 34 ~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~-~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I 112 (345)
T 1nvm_A 34 AIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEI-SHAQIATLLLPGIGSVHDLKNAYQAGARVVRV 112 (345)
T ss_dssp HHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTC-SSSEEEEEECBTTBCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhC-CCCEEEEEecCCcccHHHHHHHHhCCcCEEEE
Confidence 34667888999999995 23343334443 2456676766543 367777764 455788999999999999988
Q ss_pred chHH
Q 019244 283 GRPV 286 (344)
Q Consensus 283 g~~~ 286 (344)
..+.
T Consensus 113 ~~~~ 116 (345)
T 1nvm_A 113 ATHC 116 (345)
T ss_dssp EEET
T ss_pred EEec
Confidence 7543
No 477
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=72.85 E-value=4.5 Score=37.47 Aligned_cols=41 Identities=27% Similarity=0.302 Sum_probs=34.6
Q ss_pred cHHHHHHHHHhc--CCcEEEEe-ecCHHHHHHHHHcCCcEEEEc
Q 019244 187 SWKDVKWLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK~-v~~~~~a~~~~~~G~d~I~v~ 227 (344)
.++.++++++.+ ++||+.=+ +.+.+++.+++++|||+|.+.
T Consensus 275 ~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 275 STEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEee
Confidence 356788999988 79987654 689999999999999999884
No 478
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=72.59 E-value=31 Score=26.66 Aligned_cols=91 Identities=14% Similarity=0.060 Sum_probs=60.4
Q ss_pred HHHHHHHhcCCcEEEEeecCHHHHHHHHH----------cCCcEEEEccCCCCCCCCchhhHHHHHHHHHH-ccCCCcEE
Q 019244 190 DVKWLQTITKLPILVKGVLTAEDARIAVQ----------AGAAGIIVSNHGARQLDYVPATIMALEEVVKA-TQGRIPVF 258 (344)
Q Consensus 190 ~i~~i~~~~~~PvivK~v~~~~~a~~~~~----------~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~-~~~~~~vi 258 (344)
.++.+-+..+....+....+.+++....+ ...|.|.++-.-. +...++.+..+++. ...++|||
T Consensus 19 ~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~-----~~~g~~~~~~lr~~~~~~~~pii 93 (152)
T 3heb_A 19 LIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLP-----DMTGIDILKLVKENPHTRRSPVV 93 (152)
T ss_dssp HHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCS-----SSBHHHHHHHHHHSTTTTTSCEE
T ss_pred HHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCC-----CCcHHHHHHHHHhcccccCCCEE
Confidence 44444444454334455678888877663 5578888764311 12345677777652 12478999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHH
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~~ 286 (344)
+-.+-.+...+.+++.+||+.+. -.|+
T Consensus 94 ~~t~~~~~~~~~~~~~~g~~~~l-~KP~ 120 (152)
T 3heb_A 94 ILTTTDDQREIQRCYDLGANVYI-TKPV 120 (152)
T ss_dssp EEESCCCHHHHHHHHHTTCSEEE-ECCS
T ss_pred EEecCCCHHHHHHHHHCCCcEEE-eCCC
Confidence 99999999999999999999874 4565
No 479
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=72.22 E-value=12 Score=34.40 Aligned_cols=70 Identities=19% Similarity=0.098 Sum_probs=42.8
Q ss_pred HHHHHHHcCCcEEEEccCCCCCCCCchhhHH-------HHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEch
Q 019244 212 DARIAVQAGAAGIIVSNHGARQLDYVPATIM-------ALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 284 (344)
Q Consensus 212 ~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~-------~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig~ 284 (344)
.+++..+.|||.|+|.+.+.+.-....+.-+ .+..+++.. ++||..|. .+++-+.+++..||+.+-=-+
T Consensus 68 ~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~--~vpiSIDT--~~~~V~~aAl~aGa~iINdvs 143 (297)
T 1tx2_A 68 HAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV--KLPISIDT--YKAEVAKQAIEAGAHIINDIW 143 (297)
T ss_dssp HHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS--CSCEEEEC--SCHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC--CceEEEeC--CCHHHHHHHHHcCCCEEEECC
Confidence 4677889999999997532211001111112 223333333 78999987 477777788889999987544
Q ss_pred H
Q 019244 285 P 285 (344)
Q Consensus 285 ~ 285 (344)
.
T Consensus 144 g 144 (297)
T 1tx2_A 144 G 144 (297)
T ss_dssp T
T ss_pred C
Confidence 3
No 480
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=71.93 E-value=30 Score=30.34 Aligned_cols=87 Identities=22% Similarity=0.218 Sum_probs=56.6
Q ss_pred HHHHHHHHHhcCCcEEEEee-cC----HHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecC
Q 019244 188 WKDVKWLQTITKLPILVKGV-LT----AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 262 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v-~~----~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GG 262 (344)
.+.+++|++..+.||.+-.. .+ .++|+++.+.+-+ +.| .-|.|.+-++.+.......+++-+.-
T Consensus 43 ~~~~~ei~~~v~G~Vs~EV~a~d~e~mi~eA~~L~~~~~n-v~I---------KIP~T~eGl~A~~~L~~~GI~vn~Tl- 111 (223)
T 3s1x_A 43 GDIIREILKIVDGPVSVEVVSTKYEGMVEEARKIHGLGDN-AVV---------KIPMTEDGLRAIKTLSSEHINTNCTL- 111 (223)
T ss_dssp HHHHHHHHHHCSSCEEEECCCCSHHHHHHHHHHHHHTCTT-EEE---------EEESSHHHHHHHHHHHHTTCCEEEEE-
T ss_pred HHHHHHHHHhCCCCEEEEEccCCHHHHHHHHHHHHHhCCC-EEE---------EeCCCHHHHHHHHHHHHCCCcEEEEE-
Confidence 35688888888888887654 22 3567888888743 433 12445555554443333356666653
Q ss_pred CCCHHHHHHHHHcCCCEE--EEchH
Q 019244 263 VRRGTDVFKALALGASGI--FIGRP 285 (344)
Q Consensus 263 Ir~g~dv~kalalGAd~V--~ig~~ 285 (344)
|.|..+++.|..+||+.| .+||-
T Consensus 112 ifS~~QA~~Aa~AGa~yISPfvgRi 136 (223)
T 3s1x_A 112 VFNPIQALLAAKAGVTYVSPFVGRL 136 (223)
T ss_dssp ECSHHHHHHHHHTTCSEEEEBSHHH
T ss_pred eCCHHHHHHHHHcCCeEEEeecchH
Confidence 889999999999999987 34443
No 481
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=71.91 E-value=6.1 Score=34.80 Aligned_cols=42 Identities=29% Similarity=0.354 Sum_probs=36.5
Q ss_pred cHHHHHHHHHhc-CCcEEEEeecCHHHHHHHHHcCCcEEEEcc
Q 019244 187 SWKDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 187 ~~~~i~~i~~~~-~~PvivK~v~~~~~a~~~~~~G~d~I~v~~ 228 (344)
.++.|+++|+.. ++++.|=+..+++.+..+.++|+|.++++.
T Consensus 160 ~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd~~V~Gs 202 (227)
T 1tqx_A 160 MMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAGT 202 (227)
T ss_dssp GHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEESH
T ss_pred HHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcCCCEEEEeH
Confidence 577888998877 688888888999999999999999999853
No 482
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=71.78 E-value=55 Score=30.75 Aligned_cols=84 Identities=20% Similarity=0.205 Sum_probs=55.6
Q ss_pred CcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCC
Q 019244 186 LSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 263 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGI 263 (344)
-+++..+++++.+++||..-+. .+.++++.+++.| +|.|.+.-. .-+|+.....+..+++.. .++++..+-+
T Consensus 239 ~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~----~~GGit~~~~ia~~A~~~--gi~~~~~~~~ 312 (393)
T 1wuf_A 239 KDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLA----RVGGMSSALKIAEYCALN--EILVWCGGML 312 (393)
T ss_dssp SCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTG----GGTSHHHHHHHHHHHHHT--TCEEEECCCC
T ss_pred cCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChh----hhCCHHHHHHHHHHHHHc--CCeEEecCCc
Confidence 3678899999999999988775 5789999988887 688877421 012243333344444444 6888887766
Q ss_pred CCHHHHHHHHHc
Q 019244 264 RRGTDVFKALAL 275 (344)
Q Consensus 264 r~g~dv~kalal 275 (344)
.++--..-++.+
T Consensus 313 es~i~~aa~~hl 324 (393)
T 1wuf_A 313 EAGVGRAHNIAL 324 (393)
T ss_dssp CCHHHHHHHHHH
T ss_pred ccHHHHHHHHHH
Confidence 666554444444
No 483
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=71.71 E-value=16 Score=34.29 Aligned_cols=84 Identities=10% Similarity=0.040 Sum_probs=57.9
Q ss_pred cHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCC
Q 019244 187 SWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 264 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr 264 (344)
+|+..+++++.+++||+.-+. .++++++.+++.| +|.|.+.-. .-+|+.....+..+++.. .++++..+...
T Consensus 225 ~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~----~~GGit~~~~i~~~A~~~--g~~~~~~~~~e 298 (379)
T 2rdx_A 225 SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKIS----NLGGLSKARRTRDFLIDN--RMPVVAEDSWG 298 (379)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETT----TTTSHHHHHHHHHHHHHT--TCCEEEECSBC
T ss_pred CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEecc----ccCCHHHHHHHHHHHHHc--CCeEEEeeccC
Confidence 788999999999999998775 5789999888776 888877431 112344333444444444 68888887677
Q ss_pred CHHHHHHHHHcC
Q 019244 265 RGTDVFKALALG 276 (344)
Q Consensus 265 ~g~dv~kalalG 276 (344)
++.-...++.+.
T Consensus 299 s~i~~~a~~~la 310 (379)
T 2rdx_A 299 GEIASAAVAHFA 310 (379)
T ss_dssp SHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 776665555554
No 484
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=71.45 E-value=23 Score=34.96 Aligned_cols=41 Identities=39% Similarity=0.709 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHHcCCCEEEEc
Q 019244 240 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 283 (344)
Q Consensus 240 ~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kalalGAd~V~ig 283 (344)
+++.+..+++.. ++||++= |+.+.+|+.++..+|||+|.++
T Consensus 331 ~~~~i~~lr~~~--~~PvivK-gv~~~e~A~~a~~aGad~I~vs 371 (511)
T 1kbi_A 331 TWKDIEELKKKT--KLPIVIK-GVQRTEDVIKAAEIGVSGVVLS 371 (511)
T ss_dssp CHHHHHHHHHHC--SSCEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHh--CCcEEEE-eCCCHHHHHHHHHcCCCEEEEc
Confidence 366778887776 6899886 4677999999999999999994
No 485
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=71.33 E-value=4.7 Score=38.95 Aligned_cols=87 Identities=10% Similarity=-0.098 Sum_probs=62.7
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .+.++| +.+.+.|+++|---- .+..++.+.++++.. .+||++
T Consensus 215 ~e~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~--------~~~d~~~~~~l~~~~--~iPIa~ 284 (426)
T 4e4f_A 215 PKLFEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWMEDPT--------PAENQACFRLIRQHT--VTPIAV 284 (426)
T ss_dssp HHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECCS--------CCSSGGGGHHHHTTC--CSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECCC--------ChHHHHHHHHHHhcC--CCCEEe
Confidence 45789999988 588888753 566665 445577888875311 112345566666554 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEch
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGR 284 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~ 284 (344)
++.+.+..|+.+++..| +|.|++--
T Consensus 285 dE~~~~~~~~~~~i~~ga~d~v~~k~ 310 (426)
T 4e4f_A 285 GEVFNSIWDCKQLIEEQLIDYIRTTI 310 (426)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999988 68888753
No 486
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=71.32 E-value=54 Score=29.50 Aligned_cols=38 Identities=11% Similarity=0.180 Sum_probs=26.3
Q ss_pred HHHHHHhc--CCcEEEEee-cC----HHHHHHHHHcCCcEEEEcc
Q 019244 191 VKWLQTIT--KLPILVKGV-LT----AEDARIAVQAGAAGIIVSN 228 (344)
Q Consensus 191 i~~i~~~~--~~PvivK~v-~~----~~~a~~~~~~G~d~I~v~~ 228 (344)
++.+++.. ++||++... .+ .+.++.+.++|+|++.+..
T Consensus 59 ~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 59 IEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45555444 489998764 23 3557888999999998864
No 487
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=71.28 E-value=30 Score=37.14 Aligned_cols=91 Identities=20% Similarity=0.161 Sum_probs=55.6
Q ss_pred HHHHHHHhc-CCcEEEEee--cCHHH----HHHHHHcCCcEEEEccCCCCC--C-CCc------h-hhHHHHHHHHHHcc
Q 019244 190 DVKWLQTIT-KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQ--L-DYV------P-ATIMALEEVVKATQ 252 (344)
Q Consensus 190 ~i~~i~~~~-~~PvivK~v--~~~~~----a~~~~~~G~d~I~v~~~gG~~--~-~~g------~-~~~~~l~~i~~~~~ 252 (344)
.++++++.. +.|+++-.. .++++ ++.+.++|+|+|.+.-..-.. . ..| + ...+.+..+++..
T Consensus 624 ~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~- 702 (1025)
T 1gte_A 624 SVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV- 702 (1025)
T ss_dssp HHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-
Confidence 467777766 578877652 34443 566778999999994211000 0 111 1 1234555555554
Q ss_pred CCCcEEE--ecCCCCHHHHHHHH-HcCCCEEEE
Q 019244 253 GRIPVFL--DGGVRRGTDVFKAL-ALGASGIFI 282 (344)
Q Consensus 253 ~~~~via--~GGIr~g~dv~kal-alGAd~V~i 282 (344)
++||++ ..++.+..++++++ ..|+|++.+
T Consensus 703 -~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 703 -QIPFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp -SSCEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred -CCceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 578775 56676777777665 589999998
No 488
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=71.25 E-value=8.6 Score=34.50 Aligned_cols=74 Identities=24% Similarity=0.296 Sum_probs=45.5
Q ss_pred EEEeecCHHHHHHHHHcCCcEEEEcc-CCCCCCCCchhhHHHHHHHHHHc--cCCCcEEEecCCCCHHHHHHHHHcCCCE
Q 019244 203 LVKGVLTAEDARIAVQAGAAGIIVSN-HGARQLDYVPATIMALEEVVKAT--QGRIPVFLDGGVRRGTDVFKALALGASG 279 (344)
Q Consensus 203 ivK~v~~~~~a~~~~~~G~d~I~v~~-~gG~~~~~g~~~~~~l~~i~~~~--~~~~~via~GGIr~g~dv~kalalGAd~ 279 (344)
+++.+.+++.++++..+|+|+|+++. |+ +.+.+.+....... .+..+++=.-+. +..|+.+++..|++.
T Consensus 20 ~~~~~~~p~~~e~a~~~g~D~vilDlEha-------v~~~~k~~~~l~a~~~~~~~~~VRVn~~-~~~di~~~ld~G~~g 91 (261)
T 3qz6_A 20 MLNLVYNPDIVRIYAEAGLDYFIVDCEHA-------AYTFREINHLVSVAKNAGVSVLVRIPQV-DRAHVQRLLDIGAEG 91 (261)
T ss_dssp EESSCCCTTHHHHHHHTTCSEEEEESSSS-------CCCHHHHHHHHHHHHHHTCEEEEECSSC-CHHHHHHHHHHTCCE
T ss_pred EEecCCCHHHHHHHhcCCcCEEEEeccCC-------CCCHHHHHHHHHHHhhcCCeEEEEeCCC-CHHHHHHHHhcCCCE
Confidence 44433678899999999999999985 33 22222222211111 122333334444 447999999999999
Q ss_pred EEEch
Q 019244 280 IFIGR 284 (344)
Q Consensus 280 V~ig~ 284 (344)
|++-.
T Consensus 92 I~lP~ 96 (261)
T 3qz6_A 92 FMIPG 96 (261)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 98763
No 489
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=71.21 E-value=60 Score=29.39 Aligned_cols=82 Identities=13% Similarity=0.248 Sum_probs=53.9
Q ss_pred HHHHHHHHhcCCcEEEEee-------cCHHHHHHHHHc--CCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 189 KDVKWLQTITKLPILVKGV-------LTAEDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v-------~~~~~a~~~~~~--G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
+..+.|.+.+++||++=.+ ++++...++.+. .+-+|+-+. ..+..+.++.+.. +++.| .
T Consensus 124 ~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKdss----------gd~~~~~~~~~~~-~~f~v-~ 191 (301)
T 3m5v_A 124 EHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKEAS----------GNIDKCVDLLAHE-PRMML-I 191 (301)
T ss_dssp HHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------SCHHHHHHHHHHC-TTSEE-E
T ss_pred HHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEeCC----------CCHHHHHHHHHhC-CCeEE-E
Confidence 3567777888999998764 678888877765 355555432 1234444555555 46655 4
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEEchH
Q 019244 260 DGGVRRGTDVFKALALGASGIFIGRP 285 (344)
Q Consensus 260 ~GGIr~g~dv~kalalGAd~V~ig~~ 285 (344)
+|. ...++.++++|++.+.-+..
T Consensus 192 ~G~---d~~~~~~l~~G~~G~is~~~ 214 (301)
T 3m5v_A 192 SGE---DAINYPILSNGGKGVISVTS 214 (301)
T ss_dssp ECC---GGGHHHHHHTTCCEEEESGG
T ss_pred Ecc---HHHHHHHHHcCCCEEEehHH
Confidence 442 34477889999999987764
No 490
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=71.09 E-value=26 Score=33.36 Aligned_cols=122 Identities=13% Similarity=0.132 Sum_probs=63.3
Q ss_pred cHHHHHHHHHhcCCcEEEEeec-CHHHH----HHHHHcCCcEEEEccCCCCCCCCch--hhHHHHHHHHHHccCCCcEEE
Q 019244 187 SWKDVKWLQTITKLPILVKGVL-TAEDA----RIAVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 187 ~~~~i~~i~~~~~~PvivK~v~-~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~--~~~~~l~~i~~~~~~~~~via 259 (344)
++..|+++.+ +++||++|..+ |.++. ..+.+.|.+-|++- |+-+....-+ -.+.+++.+++..+ .+||..
T Consensus 147 N~pLL~~va~-~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLl-hc~s~YPtp~~~~nL~aI~~Lk~~f~-~lpVG~ 223 (385)
T 1vli_A 147 HLPLLKYVAR-LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIM-HCVAKYPAPPEYSNLSVIPMLAAAFP-EAVIGF 223 (385)
T ss_dssp CHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEE-EECSSSSCCGGGCCTTHHHHHHHHST-TSEEEE
T ss_pred CHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEE-eccCCCCCChhhcCHHHHHHHHHHcC-CCCEEe
Confidence 4667888876 59999999864 56553 34556787444432 3222222111 12345555555431 478866
Q ss_pred ecCCCC-HHHHHHHHHcCCCEEEEchHHHHHhhhcChHH----HHHHHHHHHHHHHHHH
Q 019244 260 DGGVRR-GTDVFKALALGASGIFIGRPVVYSLAAEGEKG----VRRVLEMLREEFELAM 313 (344)
Q Consensus 260 ~GGIr~-g~dv~kalalGAd~V~ig~~~l~~~~~~G~~~----v~~~l~~l~~el~~~m 313 (344)
++=-.- ..=...|+++||+. |=+.|--.-+..|.++ --+-++.|.++++..-
T Consensus 224 SdHt~G~~~~~~AAvAlGA~i--IEkHftldra~~G~D~~~SL~P~ef~~lv~~ir~i~ 280 (385)
T 1vli_A 224 SDHSEHPTEAPCAAVRLGAKL--IEKHFTIDKNLPGADHSFALNPDELKEMVDGIRKTE 280 (385)
T ss_dssp EECCSSSSHHHHHHHHTTCSE--EEEEBCSCTTSSCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHcCCCE--EEeCCCccccCCCCchhhhCCHHHHHHHHHHHHHHH
Confidence 541111 23344688999994 4443311101112111 0123566777777777
No 491
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=71.05 E-value=4.5 Score=38.03 Aligned_cols=41 Identities=22% Similarity=0.264 Sum_probs=35.1
Q ss_pred cHHHHHHHHHhc--CCcEEEE-eecCHHHHHHHHHcCCcEEEEc
Q 019244 187 SWKDVKWLQTIT--KLPILVK-GVLTAEDARIAVQAGAAGIIVS 227 (344)
Q Consensus 187 ~~~~i~~i~~~~--~~PvivK-~v~~~~~a~~~~~~G~d~I~v~ 227 (344)
.|+.|.++++.+ ++||+.= ++.+.+|+.+++.+|||+|.+.
T Consensus 261 a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 261 ALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIG 304 (345)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEC
Confidence 467899999998 6998754 4689999999999999999884
No 492
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=71.02 E-value=60 Score=29.32 Aligned_cols=84 Identities=15% Similarity=0.247 Sum_probs=53.3
Q ss_pred HHHHHHHHhcCCcEEEEee-------cCHHHHHHHHHcC-CcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEe
Q 019244 189 KDVKWLQTITKLPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 260 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v-------~~~~~a~~~~~~G-~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~ 260 (344)
+..+.|.+.+++||++=.+ ++++...++.+.. +-+|+-+. ..+..+.++.+..++++.| .+
T Consensus 123 ~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiKdss----------gd~~~~~~~~~~~~~~f~v-~~ 191 (297)
T 3flu_A 123 QHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKEAS----------GNIGSNIELINRAPEGFVV-LS 191 (297)
T ss_dssp HHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHSCTTCEE-EE
T ss_pred HHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCeEE-EE
Confidence 3467777778999998764 5778877776432 33444321 1334455555555556655 44
Q ss_pred cCCCCHHHHHHHHHcCCCEEEEchHH
Q 019244 261 GGVRRGTDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 261 GGIr~g~dv~kalalGAd~V~ig~~~ 286 (344)
| +..-++.++++||+.+.-+..-
T Consensus 192 G---~d~~~l~~l~~G~~G~is~~an 214 (297)
T 3flu_A 192 G---DDHTALPFMLCGGHGVITVAAN 214 (297)
T ss_dssp C---CGGGHHHHHHTTCCEEEESGGG
T ss_pred C---cHHHHHHHHhCCCCEEEechHh
Confidence 4 2344778899999999877643
No 493
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=70.94 E-value=5.8 Score=37.43 Aligned_cols=41 Identities=22% Similarity=0.122 Sum_probs=36.2
Q ss_pred CcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcC-CcEEEE
Q 019244 186 LSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAG-AAGIIV 226 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G-~d~I~v 226 (344)
+.|+.++++++.+++||+.-+-.+++++..+++.| +|+|-+
T Consensus 280 ~~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 280 TPVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEC
T ss_pred ccHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehh
Confidence 45788999999999999887766999999999999 999977
No 494
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=70.83 E-value=39 Score=28.94 Aligned_cols=78 Identities=14% Similarity=-0.061 Sum_probs=47.3
Q ss_pred EEEee--cCHHHHHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCCHHHHHHHHH-cCCCE
Q 019244 203 LVKGV--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASG 279 (344)
Q Consensus 203 ivK~v--~~~~~a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~g~dv~kala-lGAd~ 279 (344)
.+|.+ .++++++.+.++|+|++-+--...+... -+.+...++.+.++..+..++.===.+...+.+... +|.|+
T Consensus 2 ~vKICGit~~eda~~a~~~GaD~iGfif~~~SpR~---V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~ 78 (203)
T 1v5x_A 2 RVKICGITRLEDALLAEALGAFALGFVLAPGSRRR---IAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQV 78 (203)
T ss_dssp EEEECCCCCHHHHHHHHHHTCSEEEEECCTTCTTB---CCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSE
T ss_pred cEEEcCCCcHHHHHHHHHcCCCEEEEEecCCCCCc---CCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCE
Confidence 36765 7899999999999999876532221111 133555566666644343333211124666666654 79999
Q ss_pred EEEc
Q 019244 280 IFIG 283 (344)
Q Consensus 280 V~ig 283 (344)
|++-
T Consensus 79 vQLH 82 (203)
T 1v5x_A 79 AQLH 82 (203)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9974
No 495
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=70.71 E-value=37 Score=26.78 Aligned_cols=91 Identities=14% Similarity=0.082 Sum_probs=60.0
Q ss_pred HHHHHHHHhcCCcEEEEeecCHHHHHH-HHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHc-cCCCcEEEecCCCCH
Q 019244 189 KDVKWLQTITKLPILVKGVLTAEDARI-AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-QGRIPVFLDGGVRRG 266 (344)
Q Consensus 189 ~~i~~i~~~~~~PvivK~v~~~~~a~~-~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~-~~~~~via~GGIr~g 266 (344)
+.++.+-+.++..+ +....+.++|.. +.+...|.|.++-.-. +..-++.+.++++.- ..++|||.-.+-.+.
T Consensus 26 ~~l~~~L~~~G~~~-v~~a~~g~~al~~~~~~~~DlillD~~MP-----~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~ 99 (134)
T 3to5_A 26 RIVKNLLRDLGFNN-TQEADDGLTALPMLKKGDFDFVVTDWNMP-----GMQGIDLLKNIRADEELKHLPVLMITAEAKR 99 (134)
T ss_dssp HHHHHHHHHTTCCC-EEEESSHHHHHHHHHHHCCSEEEEESCCS-----SSCHHHHHHHHHHSTTTTTCCEEEEESSCCH
T ss_pred HHHHHHHHHcCCcE-EEEECCHHHHHHHHHhCCCCEEEEcCCCC-----CCCHHHHHHHHHhCCCCCCCeEEEEECCCCH
Confidence 34555555566432 233456666544 4556688888764310 123456777776532 237999999999999
Q ss_pred HHHHHHHHcCCCEEEEchHH
Q 019244 267 TDVFKALALGASGIFIGRPV 286 (344)
Q Consensus 267 ~dv~kalalGAd~V~ig~~~ 286 (344)
.++.+++.+||+.. +..||
T Consensus 100 ~~~~~~~~~Ga~~y-l~KP~ 118 (134)
T 3to5_A 100 EQIIEAAQAGVNGY-IVKPF 118 (134)
T ss_dssp HHHHHHHHTTCCEE-EESSC
T ss_pred HHHHHHHHCCCCEE-EECCC
Confidence 99999999999976 56776
No 496
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=70.63 E-value=3.9 Score=39.92 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=40.5
Q ss_pred HcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCCCC-HHHHHHHHHcCCCE------EEEchHHHHH
Q 019244 218 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASG------IFIGRPVVYS 289 (344)
Q Consensus 218 ~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGIr~-g~dv~kalalGAd~------V~ig~~~l~~ 289 (344)
++|.++++++.. ..+.+..+++.++ +.+++ +=||+- +.+...+++.|+|. +.+|||++.+
T Consensus 169 ~~g~~GvV~gat----------~~~e~~~ir~~~~-~~~~l-~PGig~qg~tp~~a~~~g~d~~~~~~livvgR~I~~A 235 (453)
T 3qw4_B 169 VNGNVGLVVGAT----------DPVALARVRARAP-TLWFL-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARA 235 (453)
T ss_dssp TTSCEEEEECTT----------CHHHHHHHHHHCS-SCCEE-ECCSSTTCCCHHHHHHHHCCTTSCCEEEEESHHHHSC
T ss_pred hcCCeEEEECCC----------CHHHHHHHHHhCC-CCeEE-ECCcCCCCCCHHHHHHhcCCcccCCceEecChhhccC
Confidence 369999988532 1244566776665 34554 445553 34677788889988 9999999874
No 497
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=70.60 E-value=5.9 Score=34.50 Aligned_cols=93 Identities=16% Similarity=0.256 Sum_probs=54.3
Q ss_pred HHHHHHHHHhcCCcEEEEeecCHHH---------HHHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEE
Q 019244 188 WKDVKWLQTITKLPILVKGVLTAED---------ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 258 (344)
Q Consensus 188 ~~~i~~i~~~~~~PvivK~v~~~~~---------a~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~vi 258 (344)
+..++.+++.+++||+.|.+ +..+ +..+.++|+|+|.+ +|.-|.+.. ..+..+.+..... .+.++
T Consensus 42 ~~~l~~v~~~~~~~v~aqd~-~~~~~ga~tGei~~~~~~~~Gad~Vll-~~ser~l~~--~e~~~~~~~a~~~--Gl~~i 115 (219)
T 2h6r_A 42 FVDLRMIVENVNIPVYAQHI-DNINPGSHTGHILAEAIKDCGCKGTLI-NHSEKRMLL--ADIEAVINKCKNL--GLETI 115 (219)
T ss_dssp TTTHHHHHHHCCSCBEESCC-CSCCSBSCTTCCCHHHHHHHTCCEEEE-SBTTBCCBH--HHHHHHHHHHHHH--TCEEE
T ss_pred HHHHHHHHHHcCCcEEEEEC-ChhhcCCccCchHHHHHHHcCCCEEEE-CCccccCCH--HHHHHHHHHHHHC--CCeEE
Confidence 34677788878999999874 2333 78899999999999 332121211 1122222222222 45444
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEEchHHHH
Q 019244 259 LDGGVRRGTDVFKALALGASGIFIGRPVVY 288 (344)
Q Consensus 259 a~GGIr~g~dv~kalalGAd~V~ig~~~l~ 288 (344)
++=+ +..+...+..+|++.+++...+..
T Consensus 116 v~v~--~~~e~~~~~~~~~~~i~~~~~~~i 143 (219)
T 2h6r_A 116 VCTN--NINTSKAVAALSPDCIAVEPPELI 143 (219)
T ss_dssp EEES--SSHHHHHHTTTCCSEEEECCCC--
T ss_pred EEeC--CchHHHHHHhCCCCEEEEEecccc
Confidence 4432 444555666689999888876643
No 498
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=70.46 E-value=5.9 Score=37.40 Aligned_cols=41 Identities=20% Similarity=0.073 Sum_probs=36.5
Q ss_pred CcHHHHHHHHHhcCCcEEEEeecCHHHHHHHHHcC-CcEEEE
Q 019244 186 LSWKDVKWLQTITKLPILVKGVLTAEDARIAVQAG-AAGIIV 226 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v~~~~~a~~~~~~G-~d~I~v 226 (344)
..|+.++++++.+++||+.-+-.++++++.+++.| +|+|-+
T Consensus 281 ~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 281 YSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred ccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEE
Confidence 35788999999999999987767999999999998 999987
No 499
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=70.33 E-value=27 Score=33.09 Aligned_cols=88 Identities=9% Similarity=-0.043 Sum_probs=64.6
Q ss_pred HHHHHHHHHhc--CCcEEEEee--cCHHHH----HHHHHcCCcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEE
Q 019244 188 WKDVKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 259 (344)
Q Consensus 188 ~~~i~~i~~~~--~~PvivK~v--~~~~~a----~~~~~~G~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via 259 (344)
.+.++.+|+.+ ++++.+..- .++++| +.+.+.|+.+|-= ..-+..++.+.++++.. .+||.+
T Consensus 186 ~~~v~avReavG~d~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~ 255 (388)
T 3tcs_A 186 EEIIPTMRRELGDDVDLLIDANSCYTPDRAIEVGHMLQDHGFCHFEE--------PCPYWELAQTKQVTDAL--DIDVTG 255 (388)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHHHTTCCEEEC--------CSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCeEEEC--------CCCccCHHHHHHHHHhc--CCCEEc
Confidence 35688999987 478888753 466664 5567788887741 11123567778887766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEEchH
Q 019244 260 DGGVRRGTDVFKALALG-ASGIFIGRP 285 (344)
Q Consensus 260 ~GGIr~g~dv~kalalG-Ad~V~ig~~ 285 (344)
+.-+.+..|+.+++..| +|.+++--.
T Consensus 256 dE~~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 256 GEQDCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp CTTCCCHHHHHHHHHHTCCSEECCCHH
T ss_pred CCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 99999999999999987 788887643
No 500
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=70.16 E-value=16 Score=34.96 Aligned_cols=85 Identities=13% Similarity=0.006 Sum_probs=56.0
Q ss_pred CcHHHHHHHHHhcCCcEEEEee-cCHHHHHHHHHcC-CcEEEEccCCCCCCCCchhhHHHHHHHHHHccCCCcEEEecCC
Q 019244 186 LSWKDVKWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 263 (344)
Q Consensus 186 ~~~~~i~~i~~~~~~PvivK~v-~~~~~a~~~~~~G-~d~I~v~~~gG~~~~~g~~~~~~l~~i~~~~~~~~~via~GGI 263 (344)
.+++..++|++.+++||..-+. .++++++.+++.| +|.|.+.-. .-+|+.....+..+++.. .+++...+..
T Consensus 258 ~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~----~~GGit~~~~ia~~A~~~--gi~~~~h~~~ 331 (418)
T 3r4e_A 258 ENQEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVV----GAGGLTHLRRIADLASLY--QVRTGCHGPT 331 (418)
T ss_dssp SSGGGGHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTT----TTTHHHHHHHHHHHHHHT--TCEEEECCCT
T ss_pred cCHHHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHcCCCCeEecCcc----ccCCHHHHHHHHHHHHHc--CCEEeecCCC
Confidence 3677899999999999998775 5789999999887 777765421 112344444444555544 6888776664
Q ss_pred -CCHHHHHHHHHcC
Q 019244 264 -RRGTDVFKALALG 276 (344)
Q Consensus 264 -r~g~dv~kalalG 276 (344)
-++--.+.++.+.
T Consensus 332 ~~s~ig~aA~~hla 345 (418)
T 3r4e_A 332 DLSPVTMGCALHFD 345 (418)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHH
Confidence 4655555454443
Done!