BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019246
(344 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 350 bits (897), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 173/321 (53%), Positives = 223/321 (69%), Gaps = 12/321 (3%)
Query: 16 YLQITPNDDDTLTRNYSNLPSSLQMVAATLDPDDHQTIAVSKDVTINKSNDLSVRIFLPR 75
YL I N D T+TR P + AA+ DP + ++KD+ +N ++ VR+FLPR
Sbjct: 21 YLPIVLNPDRTITR-----PIQIPSTAASPDPTSSSPV-LTKDLALNPLHNTFVRLFLPR 74
Query: 76 QALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPE 135
AL N KLP++VYFHGGGFILFS +++ HDFC +A V+ SVDYRLAPE
Sbjct: 75 HAL-----YNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPE 129
Query: 136 HRLPAAHDDAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADNM 195
HRLPAA+DDAMEAL WI + DEW+TN+AD ++CF+MG SAGGNI Y+AGLRAAA AD +
Sbjct: 130 HRLPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADEL 189
Query: 196 LPLKIKGLILHSPFFGGLNRTESELRLENNMHLPLCVNDLMWELALPIGADRGHEYCDPT 255
LPLKIKGL+L P FGG RT SELRL N+ LP V DL+WEL+LP+GADR HEYC+PT
Sbjct: 190 LPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLPTFVLDLIWELSLPMGADRDHEYCNPT 249
Query: 256 VGGGSKL-LEQIELLRWKVMVTGCDGDPLIDRQIELAKIMKQKGVQVVSHFVEGGFHSCE 314
++I L W+VMV GC GDP+IDRQ+ELA+ +++KGV VV+ F GG+H+ +
Sbjct: 250 AESEPLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGGYHAVK 309
Query: 315 IIDTSKTTQFIVCIKDFILSS 335
+ D K QF V +K F++ S
Sbjct: 310 LEDPEKAKQFFVILKKFVVDS 330
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 26/262 (9%)
Query: 56 SKDVTINKSNDLSVRIFLPRQALDSSSSTNKIK---------------LPVIVYFHGGGF 100
S D I++S L VRI+ D+ + PVI++FHGG F
Sbjct: 64 SFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSF 123
Query: 101 ILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWI 160
+ S +++ C VVVSV+YR APEHR P A+DD AL W+++ ++
Sbjct: 124 VHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQ--PFM 181
Query: 161 TNYADLTS-CFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRTESE 219
+ D + FL G S+GGNI ++ +RAA E +K+ G IL + FGG RTESE
Sbjct: 182 RSGGDAQARVFLSGDSSGGNIAHHVAVRAADEG-----VKVCGNILLNAMFGGTERTESE 236
Query: 220 LRLENNMHLPLCVNDLMWELALPIGADRGHEYCDPTVGGGSKLLEQIELLRWKVMVTGCD 279
RL+ + L D W+ LP ADR H C+P G + L + + ++V+G
Sbjct: 237 RRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNP-FGPNGRRLGGLPFAKSLIIVSGL- 294
Query: 280 GDPLIDRQIELAKIMKQKGVQV 301
D DRQ+ A +++ G V
Sbjct: 295 -DLTCDRQLAYADALREDGHHV 315
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 134/272 (49%), Gaps = 22/272 (8%)
Query: 39 QMVAATLDPDDHQTIAVSKDVTINKSNDLSVRIFLPRQA--------LDSSSSTNKIKLP 90
+ V A +P D S DV I++ +L R++ P A LD + +P
Sbjct: 58 RKVTANANPVDG---VFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVP 114
Query: 91 VIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALH 150
VI++FHGG F S +++ C + VVVSV+YR APE+ P A+DD AL+
Sbjct: 115 VILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALN 174
Query: 151 WIITTHDEWITNYAD-LTSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPF 209
W+ + W+ + D FL G S+GGNI + LRA ++L G IL +P
Sbjct: 175 WVNSR--SWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVL-----GNILLNPM 227
Query: 210 FGGLNRTESELRLENNMHLPLCVNDLMWELALPIGADRGHEYCDPTVGGGSKLLEQIELL 269
FGG RTESE L+ + + D W+ LP G DR H C+P G K LE +
Sbjct: 228 FGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRG-KSLEGVSFP 286
Query: 270 RWKVMVTGCDGDPLIDRQIELAKIMKQKGVQV 301
+ V+V G D + D Q+ A+ +K+ G +V
Sbjct: 287 KSLVVVAGL--DLIRDWQLAYAEGLKKAGQEV 316
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 137/297 (46%), Gaps = 32/297 (10%)
Query: 17 LQITPNDDDTLTRNYSNLPSSLQMVAATLDPDDHQTIAVSKDVTI-NKSNDLSVRIFLPR 75
LQ P+ D R SSL +V +P I +D+TI + + R++ PR
Sbjct: 18 LQFRPDMDVKTVREQFE-KSSLILVKMANEP-----IHRVEDITIPGRGGPIRARVYRPR 71
Query: 76 QALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHD-FCSNIASEFPAVVVSVDYRLAP 134
+ +LP +VY+HGGGF+L G+ THD C +A+ AVVVSVDYRLAP
Sbjct: 72 ---------DGERLPAVVYYHGGGFVL---GSVETHDHVCRRLANLSGAVVVSVDYRLAP 119
Query: 135 EHRLPAAHDDAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADN 194
EH+ PAA +DA +A W+ +D+ + + + G SAGGN+ + A ++
Sbjct: 120 EHKFPAAVEDAYDAAKWVADNYDKLGVDNGKIA---VAGDSAGGNLAAVTAIMARDRGES 176
Query: 195 MLPLKIKGLILHSPFFGGLNRTESELRLENNMHLPLCVNDLMWELALPIGADRGHEYCDP 254
+K + LI + G + T S + ++ L + + W G + D
Sbjct: 177 F--VKYQVLIYPAVNLTG-SPTVSRVEYSGPEYVILTADLMAW-----FGRQYFSKPQDA 228
Query: 255 TVGGGSKLLEQIELLRWKVMVTGCDGDPLIDRQIELAKIMKQKGVQVVSHFVEGGFH 311
S + + L +++T + DPL D A ++K +GV+ V+ G H
Sbjct: 229 LSPYASPIFADLSNLPPALVIT-AEYDPLRDEGELYAHLLKTRGVRAVAVRYNGVIH 284
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 19/153 (12%)
Query: 50 HQTIAVSKDVTINKSN-DLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTS 108
H+ + +D TI N D+ VR++ +Q DS PV+VY+HGGGF++ S+
Sbjct: 50 HERVERVEDRTIKGRNGDIRVRVY--QQKPDS---------PVLVYYHGGGFVICSI--- 95
Query: 109 MTHD-FCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLT 167
+HD C IA + VVSVDYRLAPEH+ PAA D +A W+ +E D +
Sbjct: 96 ESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRI---DPS 152
Query: 168 SCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKI 200
F+ G SAGGN+ + A ++ + +I
Sbjct: 153 KIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQI 185
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 50 HQTIAVSKDVTINKSN-DLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTS 108
+ IA ++DV I S + R++ P++A LP ++Y+HGGGF+ G+
Sbjct: 42 QEPIAETRDVHIPVSGGSIRARVYFPKKAAG---------LPAVLYYHGGGFVF---GSI 89
Query: 109 MTHD-FCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLT 167
THD C ++ +VVVSVDYRLAPE++ P A +DA AL W+ DE D
Sbjct: 90 ETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELGV---DPD 146
Query: 168 SCFLMGTSAGGNI 180
+ G SAGGN+
Sbjct: 147 RIAVAGDSAGGNL 159
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
Query: 67 LSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHD-FCSNIASEFPAVV 125
L VR++ P + P +VY+HGGG++ VG THD C +A + AVV
Sbjct: 60 LKVRMYRPEGV--------EPPYPALVYYHGGGWV---VGDLETHDPVCRVLAKDGRAVV 108
Query: 126 VSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIV 181
SVDYRLAPEH+ PAA +DA +AL WI ++ + D + G SAGGN+
Sbjct: 109 FSVDYRLAPEHKFPAAVEDAYDALQWIAERAADF---HLDPARIAVGGDSAGGNLA 161
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 90 PVIVYFHGGGFILFSVGTSMTHD-FCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEA 148
P +VY+HGGG++ VG THD C +A + AVV SVDYRLAPEH+ PAA +DA +A
Sbjct: 75 PALVYYHGGGWV---VGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDA 131
Query: 149 LHWIITTHDEWITNYADLTSCFLMGTSAGGNIV 181
L WI ++ + D + G SAGGN+
Sbjct: 132 LQWIAERAADF---HLDPARIAVGGDSAGGNLA 161
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 50 HQTIAVSKDVTINKSN-DLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTS 108
+ + +D+TI S ++ R++ P+ + V+VY+HGGGF+L G
Sbjct: 59 REEVGKIEDITIPGSETNIKARVYYPK---------TQGPYGVLVYYHGGGFVL---GDI 106
Query: 109 MTHD-FCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLT 167
++D C I + V +SVDYRLAPE++ PAA D+ +AL W+ +++ Y
Sbjct: 107 ESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG--- 163
Query: 168 SCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRTESELRLENNMH 227
+ G SAGGN+ A + A + LK + LI + F + ++ +N
Sbjct: 164 -IAVGGDSAGGNL---AAVTAILSKKENIKLKYQVLIYPAVSFDLITKS----LYDNGEG 215
Query: 228 LPLCVNDLMWELALPIGADRGHEYCDPTVGGGSKLLEQIELLRWKVMVTGCDGDPLIDRQ 287
L + W G + D S +L + L +++T + DPL D+
Sbjct: 216 FFLTREHIDW-----FGQQYLRSFADLLDFRFSPILADLNDLPPALIIT-AEHDPLRDQG 269
Query: 288 IELAKIMKQKGVQVVS 303
A + Q GVQV S
Sbjct: 270 EAYANKLLQSGVQVTS 285
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 50 HQTIAVSKDVTINKSN-DLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTS 108
+ + +D+TI S ++ R++ P+ + V+VY+HGGGF+L G
Sbjct: 59 REEVGKIEDITIPGSETNIKARVYYPK---------TQGPYGVLVYYHGGGFVL---GDI 106
Query: 109 MTHD-FCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLT 167
++D C I + V +SVDYRLAPE++ PAA D+ +AL W+ +++ Y
Sbjct: 107 ESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG--- 163
Query: 168 SCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRTESELRLENNMH 227
+ G SAGGN+ A + A + LK + LI + F + ++ +N
Sbjct: 164 -IAVGGDSAGGNL---AAVTAILSKKENIKLKYQVLIYPAVSFDLITKS----LYDNGEG 215
Query: 228 LPLCVNDLMWELALPIGADRGHEYCDPTVGGGSKLLEQIELLRWKVMVTGCDGDPLIDRQ 287
L + W G + D S +L + L +++T + DPL D+
Sbjct: 216 FFLTREHIDW-----FGQQYLRSFADLLDFRFSPILADLNDLPPALIIT-AEHDPLRDQG 269
Query: 288 IELAKIMKQKGVQVVS 303
A + Q GVQV S
Sbjct: 270 EAYANKLLQSGVQVTS 285
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 50 HQTIAVSKDVTINKSN-DLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTS 108
+ + +D+TI S ++ R++ P+ + V+VY+HGGGF+L G
Sbjct: 59 REEVGKIEDITIPGSETNIKARVYYPK---------TQGPYGVLVYYHGGGFVL---GDI 106
Query: 109 MTHD-FCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLT 167
++D C I + V +SVDYRLAPE++ PAA D+ +AL W+ +++ Y
Sbjct: 107 ESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG--- 163
Query: 168 SCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRTESELRLENNMH 227
+ G SAGGN+ A + A + LK + LI + F + ++ +N
Sbjct: 164 -IAVGGDSAGGNL---AAVTAILSKKENIKLKYQVLIYPAVSFDLITKS----LYDNGEG 215
Query: 228 LPLCVNDLMWELALPIGADRGHEYCDPTVGGGSKLLEQIELLRWKVMVTGCDGDPLIDRQ 287
L + W G + D S +L + L +++T + DPL D+
Sbjct: 216 FFLTREHIDW-----FGQQYLRSFADLLDFRFSPILADLNDLPPALIIT-AEHDPLRDQG 269
Query: 288 IELAKIMKQKGVQVVS 303
A + Q GVQV S
Sbjct: 270 EAYANKLLQSGVQVTS 285
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 50 HQTIAVSKDVTINKSN-DLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTS 108
+ + +D+TI S ++ R++ P+ + V+VY+HGGGF+L G
Sbjct: 59 REEVGKIEDITIPGSETNIKARVYYPK---------TQGPYGVLVYYHGGGFVL---GDI 106
Query: 109 MTHD-FCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLT 167
++D C I + V +SVDYRLAPE++ PAA D+ +AL W+ +++ Y
Sbjct: 107 ESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG--- 163
Query: 168 SCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRTESELRLENNMH 227
+ G SAGGN+ A + A + LK + LI + F + ++ +N
Sbjct: 164 -IAVGGDSAGGNL---AAVTAILSKKENIKLKYQVLIYPAVSFDLITKS----LYDNGEG 215
Query: 228 LPLCVNDLMWELALPIGADRGHEYCDPTVGGGSKLLEQIELLRWKVMVTGCDGDPLIDRQ 287
L + W G + D S +L + L +++T + DPL D+
Sbjct: 216 FFLTREHIDW-----FGQQYLRSFADLLDFRFSPILADLNDLPPALIIT-AEHDPLRDQG 269
Query: 288 IELAKIMKQKGVQVVS 303
A + Q GVQV S
Sbjct: 270 EAYANKLLQSGVQVTS 285
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 15/116 (12%)
Query: 67 LSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHD-FCSNIASEFPAVV 125
L VR++ P + P +VY+HGG ++ VG THD C +A + AVV
Sbjct: 60 LKVRMYRPEGV--------EPPYPALVYYHGGSWV---VGDLETHDPVCRVLAKDGRAVV 108
Query: 126 VSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIV 181
SVDYRLAPEH+ PAA +DA +AL WI ++ + D + G SAGGN+
Sbjct: 109 FSVDYRLAPEHKFPAAVEDAYDALQWIAERAADF---HLDPARIAVGGDSAGGNLA 161
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 27/243 (11%)
Query: 89 LPVIVYFHGGGFILFSVGTSMTHD-FCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAME 147
+PV+++ HGGGF ++GT+ + D FC +A E V +V+YRLAPE P +D
Sbjct: 79 VPVLLWIHGGGF---AIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYA 135
Query: 148 ALHWIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHS 207
AL +I +E D + + G SAGG + AG A + ++P+ + L +
Sbjct: 136 ALLYIHAHAEELGI---DPSRIAVGGQSAGGGLA--AGTVLKARDEGVVPVAFQFLEIPE 190
Query: 208 PFFGGLNRTESELRLENNMHLPLCVND---LMWELALPIGADRGHEYC---DPTVGGGSK 261
L+ + + N + PL L W+ L G Y DP V +
Sbjct: 191 -----LDDRLETVSMTNFVDTPLWHRPNAILSWKYYL------GESYSGPEDPDVSIYAA 239
Query: 262 LLEQIELLRW-KVMVTGCDGDPLIDRQIELAKIMKQKGVQVVSHFVEGGFHSCEIIDTSK 320
+L ++ + DPL D IE A + Q GV V H G FH ++ T+
Sbjct: 240 PSRATDLTGLPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAA 299
Query: 321 TTQ 323
++
Sbjct: 300 VSE 302
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 89 LPVIVYFHGGGFILFSVGTSMTHD-FCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAME 147
+PV+++ HGGGF ++GT+ + D FC +A E V +V+YRLAPE P +D
Sbjct: 79 VPVLLWIHGGGF---AIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYA 135
Query: 148 ALHWIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHS 207
AL +I +E D + + G SAGG + AG A + ++P+ + L
Sbjct: 136 ALLYIHAHAEELGI---DPSRIAVGGQSAGGGLA--AGTVLKARDEGVVPVAFQ--FLEI 188
Query: 208 PFFGGLNRTESELRLENN--MHLPLCVNDLMWELALPIGADRGHEYC---DPTVGGGSKL 262
P T S + H P + L W+ L G Y DP V +
Sbjct: 189 PELDDRLETVSXTNFVDTPLWHRPNAI--LSWKYYL------GESYSGPEDPDVSIYAAP 240
Query: 263 LEQIELLRW-KVMVTGCDGDPLIDRQIELAKIMKQKGVQVVSHFVEGGFHSCEIIDTSKT 321
+L ++ + DPL D IE A + Q GV V H G FH ++ T+
Sbjct: 241 SRATDLTGLPPTYLSTXELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAV 300
Query: 322 TQ 323
++
Sbjct: 301 SE 302
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 19/135 (14%)
Query: 75 RQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAP 134
RQA D + + + I+YFHGGG+I S T + + +A + A + S+DYRLAP
Sbjct: 72 RQATDGAGAAH------ILYFHGGGYISGSPSTHLV--LTTQLAKQSSATLWSLDYRLAP 123
Query: 135 EHRLPAAHDDAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADN 194
E+ PAA DD + A ++ T AD + G SAGG + + L+A ++
Sbjct: 124 ENPFPAAVDDCVAAYRALLKT-----AGSAD--RIIIAGDSAGGGLTTASMLKA---KED 173
Query: 195 MLPLKIKGLILHSPF 209
LP+ GL++ SPF
Sbjct: 174 GLPMP-AGLVMLSPF 187
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 19/135 (14%)
Query: 75 RQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAP 134
RQA D + + + I+YFHGGG+I S T + + +A + A + S+DYRLAP
Sbjct: 86 RQATDGAGAAH------ILYFHGGGYISGSPSTHLV--LTTQLAKQSSATLWSLDYRLAP 137
Query: 135 EHRLPAAHDDAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADN 194
E+ PAA DD + A ++ T AD + G SAGG + + L+A ++
Sbjct: 138 ENPFPAAVDDCVAAYRALLKT-----AGSAD--RIIIAGDSAGGGLTTASMLKA---KED 187
Query: 195 MLPLKIKGLILHSPF 209
LP+ GL++ SPF
Sbjct: 188 GLPMP-AGLVMLSPF 201
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 90 PVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEAL 149
PV+VY H GGF L ++ T H C +A VVSVDYRLAPEH PAA DA+E L
Sbjct: 86 PVVVYCHAGGFALGNLDTD--HRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVL 143
Query: 150 HWII 153
W++
Sbjct: 144 TWVV 147
>pdb|1JKM|B Chain B, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
pdb|1JKM|A Chain A, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
Length = 361
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 124/310 (40%), Gaps = 48/310 (15%)
Query: 33 NLPSSLQMVAATLD-------------PDDHQTIAVSKDVTIN-KSNDLSVRIFLPRQAL 78
+LP+ L V A+ D P D + S + + N++++ +F P
Sbjct: 47 DLPTVLAAVGASHDGFQAVYDSIALDLPTDRDDVETSTETILGVDGNEITLHVFRP---- 102
Query: 79 DSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLA----P 134
+ + LP +VY HGGG + + + +C+++A+ +VVV VD+R A
Sbjct: 103 ----AGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAA-GSVVVMVDFRNAWTAEG 157
Query: 135 EHRLPAAHDDAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADN 194
H P+ +D + A+ W + H E + L+ + G S GGN+ L A
Sbjct: 158 HHPFPSGVEDCLAAVLW-VDEHRESLG----LSGVVVQGESGGGNLAIATTLLAKRRGRL 212
Query: 195 MLPLKIKGLILHSPFFGGLNRTESELRLENNMHLP-LCVNDLMW----ELALPIGA--DR 247
I G+ P+ G + E RL LP L ND + +AL + A
Sbjct: 213 D---AIDGVYASIPYISGGYAWDHERRL---TELPSLVENDGYFIENGGMALLVRAYDPT 266
Query: 248 GHEYCDPTVGGGSKLLEQIELLRWKVMVTGCDG-DPLIDRQIELAKIMKQKGVQVVSHFV 306
G DP + EL V + DPL D I A+ + + GV V +
Sbjct: 267 GEHAEDPIA--WPYFASEDELRGLPPFVVAVNELDPLRDEGIAFARRLARAGVDVAARVN 324
Query: 307 EGGFHSCEII 316
G H ++I
Sbjct: 325 IGLVHGADVI 334
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 91 VIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALH 150
I+Y HGGG+++ S+ T + I+ A + +DYRLAPEH PAA +D + A
Sbjct: 69 AILYLHGGGYVMGSINTHRS--MVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYR 126
Query: 151 WIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFF 210
W++ D+ + G SAGG +V + A D LP+ + + SP+
Sbjct: 127 WLL---DQGFKP----QHLSISGDSAGGGLVLAVLVSA---RDQGLPMPASAIPI-SPWA 175
Query: 211 GGLNRTES-ELRLENN-MHLPLCVNDLMWELALPIGADRGHEYCDPT 255
+S + R E + M P +N + GAD H Y P
Sbjct: 176 DMTCTNDSFKTRAEADPMVAPGGINKMAARYL--NGADAKHPYASPN 220
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 91 VIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALH 150
I+Y HGGG+++ S+ T + I+ A + +DYRLAPEH PAA +D + A
Sbjct: 82 AILYLHGGGYVMGSINTHRS--MVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYR 139
Query: 151 WIITTHDEWITNYADLTSCFLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSPFF 210
W++ D+ + G SAGG +V + A D LP+ + + SP+
Sbjct: 140 WLL---DQGFKP----QHLSISGDSAGGGLVLAVLVSA---RDQGLPMPASAIPI-SPWA 188
Query: 211 GGLNRTES-ELRLENN-MHLPLCVNDLMWELALPIGADRGHEYCDPT 255
+S + R E + M P +N + GAD H Y P
Sbjct: 189 DMTCTNDSFKTRAEADPMVAPGGINKMAARYL--NGADAKHPYASPN 233
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 34/192 (17%)
Query: 5 FALPHSIDPYLYLQITPNDDDTLTRNYSNLPSSLQMVAATLDPDDHQTIA-----VSKDV 59
FA P + P + P + + +N ++ P T DP Q ++ +++
Sbjct: 37 FAKP-PLGPLRFTPPQPAEPWSFVKNATSYPP-----MCTQDPKAGQLLSELFTNRKENI 90
Query: 60 TINKSND-LSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIA 118
+ S D L + I+ P + T K +LPV+V+ HGGG + VG + T+D + A
Sbjct: 91 PLKLSEDCLYLNIYTP------ADLTKKNRLPVMVWIHGGGLM---VGAASTYDGLALAA 141
Query: 119 SEFPAVVVSVDYRL--------APEH-RLPAAHDDAMEALHWIITTHDEWITNYADLTSC 169
E VVV++ YRL EH R H D + AL W+ D + + S
Sbjct: 142 HEN-VVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWV---QDNIASFGGNPGSV 197
Query: 170 FLMGTSAGGNIV 181
+ G SAGG V
Sbjct: 198 TIFGESAGGESV 209
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 34/192 (17%)
Query: 5 FALPHSIDPYLYLQITPNDDDTLTRNYSNLPSSLQMVAATLDPDDHQTIA-----VSKDV 59
FA P + P + P + + +N ++ P T DP Q ++ +++
Sbjct: 35 FAKP-PLGPLRFTPPQPAEPWSFVKNATSYPP-----MCTQDPKAGQLLSELFTNRKENI 88
Query: 60 TINKSND-LSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIA 118
+ S D L + I+ P + T K +LPV+V+ HGGG + VG + T+D + A
Sbjct: 89 PLKLSEDCLYLNIYTP------ADLTKKNRLPVMVWIHGGGLM---VGAASTYDGLALAA 139
Query: 119 SEFPAVVVSVDYRL--------APEH-RLPAAHDDAMEALHWIITTHDEWITNYADLTSC 169
E VVV++ YRL EH R H D + AL W+ D + + S
Sbjct: 140 HE-NVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWV---QDNIASFGGNPGSV 195
Query: 170 FLMGTSAGGNIV 181
+ G SAGG V
Sbjct: 196 TIFGESAGGESV 207
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 34/192 (17%)
Query: 5 FALPHSIDPYLYLQITPNDDDTLTRNYSNLPSSLQMVAATLDPDDHQTIA-----VSKDV 59
FA P + P + P + + +N ++ P T DP Q ++ +++
Sbjct: 32 FAKP-PLGPLRFTPPQPAEPWSFVKNATSYPP-----MCTQDPKAGQLLSELFTNRKENI 85
Query: 60 TINKSND-LSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIA 118
+ S D L + I+ P + T K +LPV+V+ HGGG + VG + T+D + A
Sbjct: 86 PLKLSEDCLYLNIYTP------ADLTKKNRLPVMVWIHGGGLM---VGAASTYDGLALAA 136
Query: 119 SEFPAVVVSVDYRL--------APEH-RLPAAHDDAMEALHWIITTHDEWITNYADLTSC 169
E VVV++ YRL EH R H D + AL W+ D + + S
Sbjct: 137 HE-NVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWV---QDNIASFGGNPGSV 192
Query: 170 FLMGTSAGGNIV 181
+ G SAGG V
Sbjct: 193 TIFGESAGGESV 204
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 34/192 (17%)
Query: 5 FALPHSIDPYLYLQITPNDDDTLTRNYSNLPSSLQMVAATLDPDDHQTIA-----VSKDV 59
FA P + P + P + + +N ++ P T DP Q ++ +++
Sbjct: 37 FAKP-PLGPLRFTPPQPAEPWSFVKNATSYPP-----MCTQDPKAGQLLSELFTNRKENI 90
Query: 60 TINKSND-LSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIA 118
+ S D L + I+ P + T K +LPV+V+ HGGG + VG + T+D + A
Sbjct: 91 PLKLSEDCLYLNIYTP------ADLTKKNRLPVMVWIHGGGLM---VGAASTYDGLALAA 141
Query: 119 SEFPAVVVSVDYRL--------APEH-RLPAAHDDAMEALHWIITTHDEWITNYADLTSC 169
E VVV++ YRL EH R H D + AL W+ D + + S
Sbjct: 142 HEN-VVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWV---QDNIASFGGNPGSV 197
Query: 170 FLMGTSAGGNIV 181
+ G SAGG V
Sbjct: 198 TIFGESAGGESV 209
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
Query: 84 TNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRL--------APE 135
T + +LPV+V+ HGGG + VG + T+D + A E VVV++ YRL E
Sbjct: 106 TKRGRLPVMVWIHGGGLM---VGGASTYDGLALSAHE-NVVVVTIQYRLGIWGFFSTGDE 161
Query: 136 H-RLPAAHDDAMEALHWIITTHDEWITNY-ADLTSCFLMGTSAGGNIV 181
H R H D + AL W+ + I N+ D S + G SAGG V
Sbjct: 162 HSRGNWGHLDQVAALRWV----QDNIANFGGDPGSVTIFGESAGGQSV 205
>pdb|3GA7|A Chain A, 1.55 Angstrom Crystal Structure Of An Acetyl Esterase From
Salmonella Typhimurium
Length = 326
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 66 DLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPA-V 124
D++ R++ P+ +S +T + Y HGGGFIL G THD + + +
Sbjct: 74 DVTTRLYSPQP---TSQAT-------LYYLHGGGFIL---GNLDTHDRIXRLLARYTGCT 120
Query: 125 VVSVDYRLAPEHRLPAAHDDAMEALHWIITTHDEWITN 162
V+ +DY L+P+ R P A ++ + + DE+ N
Sbjct: 121 VIGIDYSLSPQARYPQAIEETVAVCSYFSQHADEYSLN 158
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 73 LPRQALDS------SSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVV 126
LPRQ+ D + T LPV+V+ HGG F L G+ +D S +A++ +VV
Sbjct: 75 LPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYL-GAGSEPLYD-GSKLAAQGEVIVV 132
Query: 127 SVDYRLAP 134
+++YRL P
Sbjct: 133 TLNYRLGP 140
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 73 LPRQALDS------SSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVV 126
LPRQ+ D + T LPV+V+ HGG F L G+ +D S +A++ +VV
Sbjct: 75 LPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYL-GAGSEPLYD-GSKLAAQGEVIVV 132
Query: 127 SVDYRLAP 134
+++YRL P
Sbjct: 133 TLNYRLGP 140
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 73 LPRQALDS------SSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVV 126
LPRQ+ D + T LPV+V+ HGG F L G+ +D S +A++ +VV
Sbjct: 75 LPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYL-GAGSEPLYD-GSKLAAQGEVIVV 132
Query: 127 SVDYRLAP 134
+++YRL P
Sbjct: 133 TLNYRLGP 140
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 27/143 (18%)
Query: 55 VSKDVTINKSNDLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFC 114
+++D T + L + I++P+ + S LPV+++ +GG F++ G S +F
Sbjct: 69 LTQDSTYGNEDCLYLNIWVPQGRKEVSHD-----LPVMIWIYGGAFLM---GASQGANFL 120
Query: 115 SN-------IASEFPAVVVSVDYRLAP-------EHRLPAAHD--DAMEALHWIITTHDE 158
SN IA+ +VV+ +YR+ P + LP + D A+ W+ +
Sbjct: 121 SNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEA 180
Query: 159 WITNYADLTSCFLMGTSAGGNIV 181
+ + ++T L G SAGG V
Sbjct: 181 FGGDPDNIT---LFGESAGGASV 200
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 27/143 (18%)
Query: 55 VSKDVTINKSNDLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFC 114
+++D T + L + I++P+ + S LPV+++ +GG F++ G S +F
Sbjct: 69 LTQDSTYGNEDCLYLNIWVPQGRKEVSHD-----LPVMIWIYGGAFLM---GASQGANFL 120
Query: 115 SN-------IASEFPAVVVSVDYRLAP-------EHRLPAAHD--DAMEALHWIITTHDE 158
SN IA+ +VV+ +YR+ P + LP + D A+ W+ +
Sbjct: 121 SNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEA 180
Query: 159 WITNYADLTSCFLMGTSAGGNIV 181
+ + ++T L G SAGG V
Sbjct: 181 FGGDPDNIT---LFGESAGGASV 200
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 27/143 (18%)
Query: 55 VSKDVTINKSNDLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFC 114
+++D T + L + I++P+ + S LPV+++ +GG F++ G S +F
Sbjct: 69 LTQDSTYGNEDCLYLNIWVPQGRKEVSHD-----LPVMIWIYGGAFLM---GASQGANFL 120
Query: 115 SN-------IASEFPAVVVSVDYRLAP-------EHRLPAAHD--DAMEALHWIITTHDE 158
SN IA+ +VV+ +YR+ P + LP + D A+ W+ +
Sbjct: 121 SNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEA 180
Query: 159 WITNYADLTSCFLMGTSAGGNIV 181
+ + +T L G SAGG V
Sbjct: 181 FGGDPDQIT---LFGESAGGASV 200
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 29/144 (20%)
Query: 55 VSKDVTINKSNDLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFC 114
+++D T + L + I++P+ S LPV+++ +GG F++ G+ +F
Sbjct: 69 ITQDSTYGDEDCLYLNIWVPQGRKQVSRD-----LPVMIWIYGGAFLM---GSGHGANFL 120
Query: 115 SN-------IASEFPAVVVSVDYRLAP-------EHRLPAAHD--DAMEALHWIITTHDE 158
+N IA+ +VV+ +YR+ P + LP + D A+ W+
Sbjct: 121 NNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRN--- 177
Query: 159 WITNY-ADLTSCFLMGTSAGGNIV 181
I + D + L G SAGG V
Sbjct: 178 -IAAFGGDPNNITLFGESAGGASV 200
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 73 LPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRL 132
LPR A D + LPV+V+ HGGGF F G S H ++ + +V++ +YRL
Sbjct: 102 LPRDAADKNRFAG---LPVLVFIHGGGFA-FGSGDSDLHGPEYLVSKD--VIVITFNYRL 155
Query: 133 APEHRLP---------AAHDDAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIVYY 183
L A D + L W+ + D+T LMG SAG +
Sbjct: 156 NVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVT---LMGQSAGAAATHI 212
Query: 184 AGLRAAAEA 192
L AA+
Sbjct: 213 LSLSKAADG 221
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 17/103 (16%)
Query: 88 KLPVIVYFHGGGFILFSVGTSMTHDFCS-NIASEFPAVVVSVDYRLAP-----------E 135
KLPV+V+ +GG F+ S + + +I P V VS++YR P E
Sbjct: 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAE 180
Query: 136 HRLPAAHDDAMEALHWIITTHDEWITNY-ADLTSCFLMGTSAG 177
A D + L W+ + I N+ D + G SAG
Sbjct: 181 GNTNAGLHDQRKGLEWV----SDNIANFGGDPDKVMIFGESAG 219
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 55 VSKDVTINKSNDLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFC 114
+++D T + L + I++P+ S LPV+++ +GG F++ G+ +F
Sbjct: 69 ITQDSTYGDEDCLYLNIWVPQGRKQVSRD-----LPVMIWIYGGAFLM---GSGHGANFL 120
Query: 115 SN-------IASEFPAVVVSVDYRLAP-------EHRLPAAHD--DAMEALHWIITTHDE 158
+N IA+ +VV+ +YR+ P + LP + D A+ W+
Sbjct: 121 NNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAA 180
Query: 159 WITNYADLTSCFLMGTSAGGNIV 181
+ + ++T L G SAGG V
Sbjct: 181 FGGDPDNIT---LFGESAGGASV 200
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 34/253 (13%)
Query: 55 VSKDVTINKSNDLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFC 114
VS V + L + I++P + S K PV+VY HGG ++ GT +D
Sbjct: 113 VSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPK---PVMVYIHGGSYM---EGTGNLYD-G 165
Query: 115 SNIASEFPAVVVSVDYRLAPEHRLPAAHD---------DAMEALHWIITTHDEWITNYAD 165
S +AS +V++V+YRL L D ++AL W T + D
Sbjct: 166 SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRW---TSENIGFFGGD 222
Query: 166 LTSCFLMGTSAGGNIV-------YYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRTES 218
+ G+ AGG+ V Y GL A A + L + + + T+
Sbjct: 223 PLRITVFGSGAGGSCVNLLTLSHYSEGLFQRAIAQSGTALSSWAVSFQPAKYARILATKV 282
Query: 219 ELRLENNMHLPLCVNDLMWE--LALPIGADRGHEYCDPTVGGG------SKLLEQIELLR 270
++ + + L C+ ++ + + R H P + G L+EQ E L
Sbjct: 283 GCQVSDTVELVECLQKKPYKELVDQDVQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLN 342
Query: 271 WKVMVTGCDGDPL 283
+ +M+ G+ L
Sbjct: 343 YDIMLGVNQGEGL 355
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 81 SSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRL 132
S + + K PV+ + HGG F LF G+S +D + A VVV+++YR+
Sbjct: 91 SPAADGKKRPVLFWIHGGAF-LFGSGSSPWYD-GTAFAKHGDVVVVTINYRM 140
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 81 SSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRL 132
S + + K PV+ + HGG F LF G+S +D + A VVV+++YR+
Sbjct: 91 SPAADGKKRPVLFWIHGGAF-LFGSGSSPWYD-GTAFAKHGDVVVVTINYRM 140
>pdb|1UKC|A Chain A, Crystal Structure Of Aspergillus Niger Esta
pdb|1UKC|B Chain B, Crystal Structure Of Aspergillus Niger Esta
Length = 522
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 33/171 (19%)
Query: 67 LSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNI-ASEFPAVV 125
L + +F P S++T++ KLPV ++ GGG ++ ++ ++ I AS+ V
Sbjct: 86 LFINVFKP------STATSQSKLPVWLFIQGGG---YAENSNANYNGTQVIQASDDVIVF 136
Query: 126 VSVDYR------LAPEH-----RLPAAHDDAMEALHWIITTHDEWITNY-ADLTSCFLMG 173
V+ +YR LA E L A D +AL W+ ++I + D + G
Sbjct: 137 VTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWV----KQYIEQFGGDPDHIVIHG 192
Query: 174 TSAG-GNIVYYAGLRAAAEADNMLPLKIKGLILHSPFFGGLNRTESELRLE 223
SAG G++ Y+ L A D L G I+ S F+ RT SE+ +
Sbjct: 193 VSAGAGSVAYH--LSAYGGKDEGL---FIGAIVESSFW-PTQRTVSEMEFQ 237
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 31/218 (14%)
Query: 90 PVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHD------ 143
PV+VY HGG ++ GT +D S +AS +V++V+YRL L
Sbjct: 150 PVMVYIHGGSYM---EGTGNLYD-GSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNY 205
Query: 144 ---DAMEALHWIITTHDEWITNYADLTSCFLMGTSAGGNIV-------YYAGLRAAAEAD 193
D ++AL W T + D + G+ AGG+ V Y GL A A
Sbjct: 206 GLLDLIQALRW---TSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEGLFQRAIAQ 262
Query: 194 NMLPLKIKGLILHSPFFGGLNRTESELRLENNMHLPLCVNDLMWE--LALPIGADRGHEY 251
+ L + + + T+ + + + L C+ ++ + + R H
Sbjct: 263 SGTALSSWAVSFQPAKYARILATKVGCNVSDTVELVECLQKKPYKELVDQDVQPARYHIA 322
Query: 252 CDPTVGGG------SKLLEQIELLRWKVMVTGCDGDPL 283
P + G L+EQ E L + +M+ G+ L
Sbjct: 323 FGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGL 360
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 55 VSKDVTINKSNDLSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFC 114
VS V + L + I++P + S K PV+VY HGG ++ GT +D
Sbjct: 100 VSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPK---PVMVYIHGGSYM---EGTGNLYD-G 152
Query: 115 SNIASEFPAVVVSVDYRLAPEHRLPAAHD---------DAMEALHWIITTHDEWITNYAD 165
S +AS +V++V+YRL L D ++AL W T + D
Sbjct: 153 SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRW---TSENIGFFGGD 209
Query: 166 LTSCFLMGTSAGGNIV 181
+ G+ AGG+ V
Sbjct: 210 PLRITVFGSGAGGSCV 225
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 21/125 (16%)
Query: 67 LSVRIFLPRQALDSSSSTNKIKLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVV 126
L + I++P + D N K PV+VY HGG ++ GT D S +AS +V+
Sbjct: 116 LYLNIYVPTE--DDIHDQNS-KKPVMVYIHGGSYM---EGTGNMID-GSILASYGNVIVI 168
Query: 127 SVDYRLAPEHRLPAAHD---------DAMEALHWIITTHDEWITNY-ADLTSCFLMGTSA 176
+++YRL L D ++AL WI +E + + D + G+ A
Sbjct: 169 TINYRLGILGFLSTGDQAAKGNYGLLDQIQALRWI----EENVGAFGGDPKRVTIFGSGA 224
Query: 177 GGNIV 181
G + V
Sbjct: 225 GASCV 229
>pdb|3H04|A Chain A, The Crystal Structure Of The Protein With Unknown Function
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 275
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 29/131 (22%)
Query: 91 VIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHDDAMEALH 150
VIVY HGGG ++F ++ + + + + +S YRL PE L +D +
Sbjct: 31 VIVYIHGGG-LMFGKANDLSPQYIDILTEHYDLIQLS--YRLLPEVSLDCIIEDVYASFD 87
Query: 151 WIITTHDEWITNYADLTSC--FLMGTSAGGNIVYYAGLRAAAEADNMLPLKIKGLILHSP 208
I + + ++C F G S+G Y L A + D I G+I
Sbjct: 88 AIQSQY----------SNCPIFTFGRSSGA----YLSLLIARDRD------IDGVID--- 124
Query: 209 FFGGLNRTESE 219
F G +R +E
Sbjct: 125 -FYGYSRINTE 134
>pdb|2HXR|A Chain A, Structure Of The Ligand Binding Domain Of E. Coli Cynr, A
Transcriptional Regulator Controlling Cyanate Metabolism
pdb|2HXR|B Chain B, Structure Of The Ligand Binding Domain Of E. Coli Cynr, A
Transcriptional Regulator Controlling Cyanate Metabolism
pdb|3HFU|A Chain A, Crystal Structure Of The Ligand Binding Domain Of E. Coli
Cynr With Its Specific Effector Azide
pdb|3HFU|B Chain B, Crystal Structure Of The Ligand Binding Domain Of E. Coli
Cynr With Its Specific Effector Azide
pdb|3HFU|C Chain C, Crystal Structure Of The Ligand Binding Domain Of E. Coli
Cynr With Its Specific Effector Azide
pdb|3HFU|D Chain D, Crystal Structure Of The Ligand Binding Domain Of E. Coli
Cynr With Its Specific Effector Azide
Length = 238
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 263 LEQIELLRWKVMVTGCDGDPL-IDRQIELAKIMKQKGV---------QVVSHFVE-GGFH 311
LE I LL + + PL + Q+ L+++ +K V + + H+ E G H
Sbjct: 94 LEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLH 153
Query: 312 SCEIIDTSKTTQFIVCIKDFILSSTVPACLVSQ 344
+I+ + + + I+ LS+ +PA + +Q
Sbjct: 154 PQVVIEANSISAVLELIRRTSLSTLLPAAIATQ 186
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|B Chain B, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|C Chain C, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|D Chain D, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
Length = 580
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 88 KLPVIVYFHGGGFILFSVGTSMTHDFCSNIASEFPAVVVSVDYRLAPEHRLPAAHD---- 143
K PV+++ HGG ++ GT D S +A+ +VV+++YRL L
Sbjct: 137 KKPVMLFLHGGSYM---EGTGNMFD-GSVLAAYGNVIVVTLNYRLGVLGFLSTGDQAAKG 192
Query: 144 -----DAMEALHWIITTHDEWITNY-ADLTSCFLMGTSAGGNIV 181
D ++AL W+ E I ++ D + G+ AG + V
Sbjct: 193 NYGLLDQIQALRWL----SENIAHFGGDPERITIFGSGAGASCV 232
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,372,152
Number of Sequences: 62578
Number of extensions: 421832
Number of successful extensions: 1018
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 957
Number of HSP's gapped (non-prelim): 51
length of query: 344
length of database: 14,973,337
effective HSP length: 100
effective length of query: 244
effective length of database: 8,715,537
effective search space: 2126591028
effective search space used: 2126591028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)