BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019247
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2
SV=2
Length = 408
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 178/299 (59%), Gaps = 9/299 (3%)
Query: 27 LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
LGQ++S + T+ ++ D + P+ QS L Y+ L L Y L R+ L
Sbjct: 66 LGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125
Query: 80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
+ W+ Y++LG +D++ N+L KA+Q+T+++S+ LLDC IP I+ +W FL RY
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVH 185
Query: 140 LFGASLCVLGLGLMLLSDAEMA--GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
G +C+LG+G M+ +D + G G L+GD+LV+ GA + +S V EE++++ +
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLS 245
Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK 257
RVE + MIG++G S +QL+ +E K L V W I L +VG +A F Y+ +P V+K
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305
Query: 258 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 316
+ AT + LS+LT+D++++ +F +H + + Y L+F +LIGL++YS+T+ + P
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDP 364
>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2
SV=1
Length = 408
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 176/299 (58%), Gaps = 9/299 (3%)
Query: 27 LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
LGQ++S + T+ + D + P+ QS L Y+ L L Y L R+ L
Sbjct: 66 LGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125
Query: 80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
+ W+ Y++LG +D++ N+L KA+Q+T+++SV LLDC IP I+ +W FL RY
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVH 185
Query: 140 LFGASLCVLGLGLMLLSDAEMA--GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
G +C+LG+G M+ +D + G G L+GD+LV+ GA + +S V EE +++ +
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLS 245
Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK 257
RVE + MIG++G S +QL+ +E K L V W I L +VG +A F Y+ +P V+K
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305
Query: 258 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 316
+ AT + LS+LT+D++++ +F +H + + Y L+F +LIGL++YS+T+ + P
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDP 364
>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1
SV=1
Length = 374
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 174/292 (59%), Gaps = 9/292 (3%)
Query: 27 LGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
LGQ++S + ++ T+ + + V+ P+ QS + Y L L Y +L +R L
Sbjct: 45 LGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVIL 104
Query: 80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
+ W+ Y+LLG DV+ N++ +A+Q+T+++SV LLDC IP + +W L RY V
Sbjct: 105 KRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIH 164
Query: 140 LFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
++C+LG+G M+ +D A GS L+GDILV+ GA +A+S V EE++VKK+
Sbjct: 165 FIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLS 224
Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK 257
R E + M+G++G ++S +QL +E K + S+ W I L FV A F Y+ +P V+K
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIK 284
Query: 258 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 309
++ AT + L +LT+D++++ + +F + + + Y L+F +++G I+Y +T
Sbjct: 285 VTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGFILYCSTP 336
>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2
SV=2
Length = 375
Score = 178 bits (451), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 174/299 (58%), Gaps = 9/299 (3%)
Query: 27 LGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGILLYRR------QRL 79
LGQ++S + ++ T+ + + V+ P+ QS + Y L L Y +L ++ + L
Sbjct: 45 LGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEIL 104
Query: 80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
+ W+ Y LLG DV+ N+L +A+Q+T+++SV LLDC IP + +W L RY V
Sbjct: 105 RRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIH 164
Query: 140 LFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
+C+LG+G M+ +D A GS L+GDILV+ GA +A+S V EE++VKK+
Sbjct: 165 FIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLS 224
Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVPFVLK 257
R E + M+G++G ++S +QL +E K + ++W I L FV A F Y+ +P V+K
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALCMFCLYSFMPLVIK 284
Query: 258 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 316
++ AT + L +LT+D++++ +F + + + Y L+F +++G I+Y +T + P
Sbjct: 285 VTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFILYCSTPTRTVEPP 343
>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2
PE=2 SV=2
Length = 391
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 165/295 (55%), Gaps = 13/295 (4%)
Query: 27 LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
LGQ++S + T+ ++ D + P+ QS L Y+ L L Y L R+ L
Sbjct: 45 LGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 104
Query: 80 QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
+ W+ Y+ LG +D++ +L KA Q+T+ S+ LL+C IP I+ +W FL RY V
Sbjct: 105 KRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILLSWFFLLVRYKVLH 164
Query: 140 LFGASLCVLGLGLMLLSDAEMAGG------GGSRPLLGDILVIAGAIFFAMSYVGEEFLV 193
GA C+LG+G M +D M G L+GD+LV+ GA + +S V +E++V
Sbjct: 165 FIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGATLYGISSVCQEYIV 224
Query: 194 KKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILSFVGNAASSFMFYTLVP 253
+ + RVE++ MIG++G S +QL+ +E K L V W I L +VG A F Y+ +P
Sbjct: 225 RNLSRVELLGMIGLFGSFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFTACMFGLYSFMP 284
Query: 254 FVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT 308
V+K + AT + LS+LT++++ +F +H + + Y L+F +L+GL+ Y +T
Sbjct: 285 VVIKKTSATAINLSMLTAELYTFFCGLFLFHYKFSGLYLLSFFTILLGLVFYFST 339
>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC320.08 PE=1 SV=1
Length = 505
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 158/308 (51%), Gaps = 17/308 (5%)
Query: 14 RSQMALRTLYLLL---------LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSL 64
S + LY LL LGQ++S + ++ ++ + + P Q+ L Y L
Sbjct: 125 ESTPKAKPLYFLLDKRFWIVFFLGQVLSLCITATNTFNGYMSGIS-NIPAFQTFLVYALL 183
Query: 65 ALAYGGILLYR---RQRLQV---SWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC 118
L Y ++R ++ ++ + Y++ F DV+GN+ A+Q+T++ S +LLD
Sbjct: 184 TLVYTPYTVFRMGFKKYFEMIFRHGWKYIIFAFFDVEGNYFVVLAYQYTNMLSASLLDSW 243
Query: 119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGG-GGSRPLLGDILVIA 177
A ++ +++FL RY Q+ G C+ GL L+++SD G P LGD +I
Sbjct: 244 ATVAVVILSFIFLKVRYHWSQILGVVACIGGLVLLVVSDVISRGDYSAVNPGLGDGYMII 303
Query: 178 GAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIILS 237
GA + +S EE+ K+ V+ + +YG ++S++Q + L ++ W++++
Sbjct: 304 GATCYGVSNTLEEYFASKLPLYVVIGQLSLYGSIISIIQTFIFDRHHLYTLHWTSEMGGY 363
Query: 238 FVGNAASSFMFYTLVPFVLKLSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAA 297
G F+ Y+L P + ++S AT +S+LTSD W++++ I + V W Y +AF
Sbjct: 364 LAGFILVMFLLYSLAPILFRMSSATFYNISLLTSDFWSLVIGIHVFGYHVYWLYPIAFVL 423
Query: 298 VLIGLIIY 305
+++GL +Y
Sbjct: 424 IILGLFVY 431
>sp|Q8N357|S35F6_HUMAN Solute carrier family 35 member F6 OS=Homo sapiens GN=SLC35F6 PE=1
SV=1
Length = 371
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 43/261 (16%)
Query: 86 YLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFG--- 142
+L D+ G L A TS SS +L I +F+ FLG R + Q G
Sbjct: 91 FLPPALCDMTGTSLMYVALNMTSASSFQMLRGAVIIFTGLFSVAFLGRRLVLSQWLGILA 150
Query: 143 --ASLCVLGLG-LMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKK--ID 197
A L V+GL L+ D++ S + GD+L+I I A+ V EE V K +
Sbjct: 151 TIAGLVVVGLADLLSKHDSQHK---LSEVITGDLLIIMAQIIVAIQMVLEEKFVYKHNVH 207
Query: 198 RVEVVCMIGVYGLLV----------------SVVQLSTLE--LKSLESVKWSTDIILSFV 239
+ V G++G ++ S TLE L + V I ++ +
Sbjct: 208 PLRAVGTEGLFGFVILSLLLVPMYYIPAGSFSGNPRGTLEDALDAFCQVGQQPLIAVALL 267
Query: 240 GNAAS-SFMFYTLVPFVLKLSGATMLIL-SVLTSDMWAVILRIFCYHQQVNWTYY----- 292
GN +S +F + + +LS T ++L S+ T +WA+ L + W +
Sbjct: 268 GNISSIAFFNFAGISVTKELSATTRMVLDSLRTVVIWALSLAL-------GWEAFHALQI 320
Query: 293 LAFAAVLIGLIIYSTTAKDLL 313
L F +LIG +Y+ + LL
Sbjct: 321 LGFLILLIGTALYNGLHRPLL 341
>sp|Q5RFT1|S35F6_PONAB Solute carrier family 35 member F6 OS=Pongo abelii GN=SLC35F6 PE=2
SV=1
Length = 371
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 43/261 (16%)
Query: 86 YLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFG--- 142
+L D+ G L A TS SS +L I +F+ FLG R + Q G
Sbjct: 91 FLPPALCDMTGTSLMYVALNMTSASSFQMLRGAVIIFTGLFSVAFLGRRLVLSQWLGILA 150
Query: 143 --ASLCVLGLG-LMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKK--ID 197
A L V+GL L+ D++ S + GD+L+I I A+ V EE V K +
Sbjct: 151 TIAGLVVVGLADLLSKHDSQHK---LSEVITGDLLIIMAQIIVAIQMVLEEKFVYKHNVH 207
Query: 198 RVEVVCMIGVYGLLV----------------SVVQLSTLE--LKSLESVKWSTDIILSFV 239
+ V G++G ++ S TLE L + V I ++ +
Sbjct: 208 PLRAVGTEGLFGFVILSLLLVPMYYIPAGSFSGNPRGTLEDALDAFCQVGRQPLIAVALL 267
Query: 240 GNAAS-SFMFYTLVPFVLKLSGATMLIL-SVLTSDMWAVILRIFCYHQQVNWTYY----- 292
GN +S +F + + +LS T ++L S+ T +WA+ L + W +
Sbjct: 268 GNISSIAFFNFAGISVTKELSATTRMVLDSLRTVVIWALSLAL-------GWEAFHALQI 320
Query: 293 LAFAAVLIGLIIYSTTAKDLL 313
L F +LIG +Y+ + LL
Sbjct: 321 LGFLILLIGTALYNGLHRPLL 341
>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2
SV=1
Length = 524
Score = 38.1 bits (87), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 96 GNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFL---GTRYSVWQLFGASLCVLGLGL 152
N + +A T ++ V +L + ++ VF G R+++ +L L + G+ L
Sbjct: 255 ANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVL 314
Query: 153 MLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLL 211
+ LS +E + G R +G I +AGA+F+A+ V + V + D++++ G GL
Sbjct: 315 VNLSGSEKSAG---RDTIGSIWSLAGAMFYAVYIVMIKRKVDREDKLDIPMFFGFVGLF 370
>sp|Q55C66|CRTP3_DICDI Crt homolog 3 OS=Dictyostelium discoideum GN=crtp3 PE=3 SV=1
Length = 478
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 76 RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRY 135
++ Y ++++G +D F TS LL+ IP ++ +++FL RY
Sbjct: 115 KETRNFPQYKFVIMGLLDAINGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFLRERY 174
Query: 136 SVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKK 195
S++QL GA++ +LG ++ L + + G G L + + I A+S V ++ +
Sbjct: 175 SLFQLGGAAV-ILGGVIVSLIPSLVGGSSGGNILFYNFFYLISVIPGALSNVYKDIAFQS 233
Query: 196 ID 197
ID
Sbjct: 234 ID 235
>sp|Q9GSB0|CRTP1_DICDI Crt homolog 1 OS=Dictyostelium discoideum GN=crtp1 PE=2 SV=1
Length = 473
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 114 LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPL 169
LL+ IP ++ +++FL RYS+ QL GA + + G+ L+ GG++P
Sbjct: 150 LLNQAIIPFTMIASFIFLKERYSLIQLGGALVIIGGVVTSLIPSLLGGSSGGNKPF 205
>sp|Q09875|YAGC_SCHPO Uncharacterized protein C12G12.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC12G12.12 PE=4 SV=1
Length = 324
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 92 VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG 151
+D+ G+ L N +TS S + I +F L + ++ QL SL + LG
Sbjct: 84 MDICGSTLMNVGLLYTSASIYQMTRGSLIIFVALFATTLL--KRTIGQLQWLSLSFVVLG 141
Query: 152 LMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVK--KIDRVEVVCMIGVYG 209
+ ++ + + GS P+LG V+ G F A + EE+++ ++D E+V G YG
Sbjct: 142 VAIVGYSGSSSSIGSNPILGITAVLIGQFFLATQFTIEEYILSFIQVDPSELVAYEGTYG 201
Query: 210 L 210
+
Sbjct: 202 V 202
>sp|Q8BY79|S35G1_MOUSE Solute carrier family 35 member G1 OS=Mus musculus GN=Slc35g1 PE=2
SV=1
Length = 368
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 21/74 (28%)
Query: 86 YLLLGFVDVQGN--FLFNK-------------AFQFTSISSVTLLDCCAIPCAI---VFT 127
Y GF+ +G FLF + AFQ TS++ T++ A C + +F
Sbjct: 121 YRKTGFIGPKGQRLFLFLRGVFGSSAMILMYYAFQTTSLADATVI---AFSCPVFTSIFA 177
Query: 128 WVFLGTRYSVWQLF 141
W+FL +YS+W F
Sbjct: 178 WIFLKEKYSLWDAF 191
>sp|Q8IY50|S35F3_HUMAN Solute carrier family 35 member F3 OS=Homo sapiens GN=SLC35F3 PE=2
SV=2
Length = 421
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS 156
N+L+ A + + + V++L CC + +W+ L R+ ++ A L + G+ +M +
Sbjct: 165 NYLYLHAIKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYA 224
Query: 157 DAEMAGGGGSRPLLGDILVIAGA 179
D G S ++G LV+A A
Sbjct: 225 D-----GFHSHSVIGIALVVASA 242
>sp|O32256|YVBV_BACSU Uncharacterized transporter YvbV OS=Bacillus subtilis (strain 168)
GN=yvbV PE=3 SV=1
Length = 305
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 41/213 (19%)
Query: 49 GVDAPITQSVLCYLSLALAY-------GGILLY-------RRQRLQVSWYWYLL------ 88
GV+ P++++ L Y S L + GG+LL + RL+ +W YL+
Sbjct: 21 GVNWPLSKAALAY-SPPLLFAGIRTLIGGLLLVIVALPRIHKLRLKETWPIYLVSALLNI 79
Query: 89 ---LGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASL 145
G + N+L F L+ VF+W++LG V ++ G L
Sbjct: 80 TLFYGLQTIGLNYLPAGLFSAIVFFQPVLMG--------VFSWLWLGESMFVMKVIGLIL 131
Query: 146 CVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMI 205
G+ ++ AG GG ++G +L + A+ +A+ G ++ K RV+ + M+
Sbjct: 132 GFAGVAVI-----SAAGFGGHISVIGVLLALGSAVSWAL---GTVYMKKTGSRVDSIWMV 183
Query: 206 GVYGLLVSVVQL-STLELKSLESVKWSTDIILS 237
+ + SV L S +S +++W+ I S
Sbjct: 184 ALQLTIGSVFLLISGFWTESFSAIQWTAPFITS 216
>sp|B1KJU9|NUOB_SHEWM NADH-quinone oxidoreductase subunit B OS=Shewanella woodyi (strain
ATCC 51908 / MS32) GN=nuoB PE=3 SV=1
Length = 213
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 132 GTRYSVWQL-FGASLCVLGLGLMLLSDAEMAGGGG----SRPLLGDILVIAGAIFFAMSY 186
G S+W FG S C + + S ++A G + P D++VI+G +F M+
Sbjct: 38 GRSNSLWPFNFGLSCCYVEMATSFTSRHDIARFGSEVIRATPREADLIVISGTVFLKMAP 97
Query: 187 VGEEFLVKKIDRVEVVCM 204
V + + ++ V+CM
Sbjct: 98 VIKHLYDQMLEPKWVICM 115
>sp|Q7NDQ8|Y4174_GLOVI UPF0060 membrane protein glr4174 OS=Gloeobacter violaceus (strain
PCC 7421) GN=glr4174 PE=3 SV=1
Length = 107
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 120 IPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD 157
I ++V+ W+ GTR W L GA LC+ G ++L +D
Sbjct: 67 IAASLVWLWLVEGTRPDRWDLAGALLCLAGAAVILFAD 104
>sp|Q550A6|CRTP2_DICDI Crt homolog 2 OS=Dictyostelium discoideum GN=crtp2 PE=3 SV=1
Length = 484
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 114 LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLL 170
LL+ IP ++ +++FL RYS+ QL GA + + G+ + L+ + GG S +L
Sbjct: 158 LLNQSVIPFTMLLSFIFLKERYSLIQLGGALIIIGGVVVSLI--PSLTGGNTSGNML 212
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.141 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,145,303
Number of Sequences: 539616
Number of extensions: 4405800
Number of successful extensions: 13357
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 13303
Number of HSP's gapped (non-prelim): 93
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)