BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019249
         (344 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O95153|RIMB1_HUMAN Peripheral-type benzodiazepine receptor-associated protein 1
           OS=Homo sapiens GN=BZRAP1 PE=1 SV=2
          Length = 1857

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 35/189 (18%)

Query: 168 KRVIMAESETAVEKEKVTLGQEEIRKKANQIENMSLKLEEMERFALGTNGILNEMRQRVE 227
           +RV   ESE + +++K    ++E RKK  + E + L+L + +          NE  +   
Sbjct: 335 QRVQQLESELSKKRKKCESLEQEARKKQRRCEELELQLRQAQ----------NENAR--- 381

Query: 228 DLVEETSRQRQRAAENEQ----------ELCRVKRDFESLKNYVSSLISVRETL------ 271
            LVEE SR   RA E EQ          +L  V ++ +S       L S  E+L      
Sbjct: 382 -LVEENSRLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKLESLEQVLKH 440

Query: 272 ---LSSEKQFQTIERLFERLVAKTTQLEGEKMQK-EAEVQKLMEENVR-LTALLDKKEAQ 326
              ++  +Q   +E    RL  +  Q E  ++Q+ +AE Q+  E  V+ L + LD  +A+
Sbjct: 441 MREVAQRRQQLEVEHEQARLSLREKQEEVRRLQQAQAEAQREHEGAVQLLESTLDSMQAR 500

Query: 327 LLAMNEQCK 335
           +  + EQC+
Sbjct: 501 VRELEEQCR 509


>sp|Q9JIR0|RIMB1_RAT Peripheral-type benzodiazepine receptor-associated protein 1
           OS=Rattus norvegicus GN=Bzrap1 PE=1 SV=2
          Length = 1847

 Score = 43.1 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 15/178 (8%)

Query: 169 RVIMAESETAVEKEKVTLGQEEIRKKANQIENMSLKLEEMERFALGTNGILNEMRQRVED 228
           RV   ESE   +++K    ++E RKK  + E + L+L    R A   N  L E   R+  
Sbjct: 333 RVQQLESELCKKRKKCESLEQEARKKQRRCEELELQL----RAAQNENARLVEENSRLSG 388

Query: 229 LVEETSRQRQRAAENEQELCRVKRDFES-------LKNYVSSLISVRETLLSSEKQFQTI 281
              E  +     AE + +L  V ++ +S       L++ + SL  V E +    ++ Q +
Sbjct: 389 KATEKEQVEWENAELKGQLLGVTQERDSALRKSQGLQSKLESLEQVLEHMRKVAQRRQQL 448

Query: 282 ERLFE--RLVAKTTQLEGEKMQK-EAEVQKLMEENVR-LTALLDKKEAQLLAMNEQCK 335
           E   E  RL  +  Q E  ++Q+ +AE ++  E  V+ L + LD  +A++  +  QC+
Sbjct: 449 EEEHEQARLSLQEKQEEVRRLQQAQAEAKREHEGAVQLLESTLDSMQARVRELEGQCR 506


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.127    0.334 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,901,566
Number of Sequences: 539616
Number of extensions: 4462341
Number of successful extensions: 25223
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 1414
Number of HSP's that attempted gapping in prelim test: 21124
Number of HSP's gapped (non-prelim): 4723
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)