Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>019250
MGNCFTTATTITTTTATTAAAFTSKKSTAEIAPYDCVVKVNKPTPSVRLCGSPNSILTAY
VRFALLYKSISPRFIPCDNPIFESEVPTVLRVGSESVSGSRQTLLDFVESKFPEPSLNNI
GDADDGDEVSPRVVRMMRMQHGSLRWHLARMVRWAEDLAKRKGKKAGDPTVGSPKMEFKK
FASTYSQLLELLLEHAQMEERVVFPGLEKDDRGLCKAANEEHARDLPIMNGIKEDIKATG
VLDCGSPAYHEALRNLSVRLKSLQKHCKEHFEEEERDLLPLVEATELSTEQQKRTLAQCV
SVMQGTHSRLFNFFLEGLTPEEAMQYLDLTTYAVIKNNLSPNFV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019250
        (344 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2080325 - symbol:AT3G54290 "AT3G54290" species...   856  1.7e-88   2


>TAIR|locus:2080325 [details] [associations]
            symbol:AT3G54290 "AT3G54290" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0006661 "phosphatidylinositol
            biosynthetic process" evidence=RCA] Pfam:PF01814 EMBL:CP002686
            InterPro:IPR012312 EMBL:AY093199 EMBL:BT008834 IPI:IPI00519599
            RefSeq:NP_566997.1 UniGene:At.35124 ProteinModelPortal:Q8RWC0
            SMR:Q8RWC0 IntAct:Q8RWC0 PaxDb:Q8RWC0 PRIDE:Q8RWC0
            EnsemblPlants:AT3G54290.1 GeneID:824596 KEGG:ath:AT3G54290
            TAIR:At3g54290 eggNOG:NOG323338 InParanoid:Q8RWC0 OMA:MNGIKED
            PhylomeDB:Q8RWC0 ProtClustDB:CLSN2689158 ArrayExpress:Q8RWC0
            Genevestigator:Q8RWC0 Uniprot:Q8RWC0
        Length = 350

 Score = 856 (306.4 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
 Identities = 169/287 (58%), Positives = 220/287 (76%)

Query:    44 TPSVRLCGSPNSILTAYVRFALLYKSISPRFIPCDNPIFESEVPTVLRVGSESVSGSRQT 103
             T +VRL G PNS++T+Y+RFALL+K +  RF+P      E + PT+ +VGSE+VSGSR+ 
Sbjct:    52 TATVRLYGPPNSLVTSYLRFALLHKKVPLRFVPS-----EDQKPTI-QVGSETVSGSREV 105

Query:   104 LLDFVESKFPEPSLNNIGDADDG-DEVSPRVVRMMRMQHGSLRWHLARMVRWAEDLAKRK 162
             LL ++E KFPEP L       +G DE +P +V+M+ +QH S+ WH+ RM+RW+EDLA R 
Sbjct:   106 LLRYIEDKFPEPRLMIWKFNLEGFDEATPLIVKMIWLQHRSMLWHMERMLRWSEDLAARG 165

Query:   163 GKKAGDPTVGSPKMEFKKFASTYSQLLELLLEHAQMEERVVFPGLEKDDRGLCKAANEEH 222
             GKKA DP+VG+PKME +KFA +Y+ L EL+LEHAQMEER++FP LE  DRG+CK+ANEEH
Sbjct:   166 GKKAVDPSVGTPKMEIRKFAKSYTHLQELMLEHAQMEERILFPVLESVDRGMCKSANEEH 225

Query:   223 ARDLPIMNGIKEDIKATGVLDCGSPAYHEALRNLSVRLKSLQKHCKEHFEEEERDLLPLV 282
              R+LP+MNGIKEDIK+ GVLD G  +  EAL +L+ R KSLQ  CK HFEEEE+DLLP+V
Sbjct:   226 GRELPMMNGIKEDIKSIGVLDSGICS--EALFSLASRFKSLQMMCKTHFEEEEKDLLPMV 283

Query:   283 EATELSTEQQKRTLAQCVSVMQGTHSRLFNFFLEGLTPEEAMQYLDL 329
             EA E+  E+QK+ + Q + VM GTHS  F+F LEGLTP+EAMQY+DL
Sbjct:   284 EAAEMGKEKQKKLMNQSLEVMSGTHSNSFDFLLEGLTPQEAMQYIDL 330

 Score = 47 (21.6 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query:    30 EIAPYDCVVKVNKPTPSVRLCGSPNS-ILTA 59
             EI+P+D VVK   P PS      P   I TA
Sbjct:    14 EISPFDLVVK--PPPPSAAATAPPTQRIPTA 42


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      344       319   0.00084  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  216 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.96u 0.16s 30.12t   Elapsed:  00:00:01
  Total cpu time:  29.96u 0.16s 30.12t   Elapsed:  00:00:01
  Start:  Sat May 11 06:02:21 2013   End:  Sat May 11 06:02:22 2013

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