BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019253
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LK09|SYP32_ARATH Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 SV=1
Length = 347
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/355 (67%), Positives = 281/355 (79%), Gaps = 19/355 (5%)
Query: 1 MPVKAAQTSFRDRTFEFQSVAERLRKTVS----SQNGPSSSSKAD-EQRSAVTLQSEFNR 55
M + Q+S+RDR+ EF + E LR++++ + N P +++ D +R + +SEFN+
Sbjct: 1 MSARHGQSSYRDRSDEFFKIVETLRRSIAPAPAANNVPYGNNRNDGARREDLINKSEFNK 60
Query: 56 RASKIGLGIHHTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLV 115
RAS IGL I+ TSQKL+KLAKLAKRTSVFDDPT EIQELT VIKQ+I+ALNSA+VDLQL
Sbjct: 61 RASHIGLAINQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEISALNSALVDLQLF 120
Query: 116 SNSRND-GISS---DTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFS 171
+S+ND G +S D ++HS TVVDDLK RLM TKEFK+VLTMRTEN+KVHESRRQLFS
Sbjct: 121 RSSQNDEGNNSRDRDKSTHSATVVDDLKYRLMDTTKEFKDVLTMRTENMKVHESRRQLFS 180
Query: 172 STASKDSANPFVRQRPLATRSAAASTSSSPPPWANGSPSSS-QLFPRK-QDGESQPLLQQ 229
S ASK+S NPFVRQRPLA ++AA + S P PWANGS SSS QL P K +GES PLLQQ
Sbjct: 181 SNASKESTNPFVRQRPLAAKAAA--SESVPLPWANGSSSSSSQLVPWKPGEGESSPLLQQ 238
Query: 230 QQHHQQQQHHQQQQQQQMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEI 289
Q QQQQ QQQMVPLQD+YMQ RAEAL VESTIHEL +IF QLAT+VSQQGEI
Sbjct: 239 SQQQQQQQ------QQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEI 292
Query: 290 AIRIDENMDDTMANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMIFLFFVA 344
AIRID+NM+DT+ANVEGAQ L +YLNSISSNRWLM+KIFFVLI FLMIFLFFVA
Sbjct: 293 AIRIDQNMEDTLANVEGAQSQLARYLNSISSNRWLMMKIFFVLIAFLMIFLFFVA 347
>sp|Q9FFK1|SYP31_ARATH Syntaxin-31 OS=Arabidopsis thaliana GN=SYP31 PE=1 SV=1
Length = 336
Score = 289 bits (739), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/352 (47%), Positives = 227/352 (64%), Gaps = 33/352 (9%)
Query: 8 TSFRDRTFEFQSVAERLRKTVS------SQNGPSSSSKADEQRSAVTLQSEFNRRASKIG 61
++FRDRT E S+++ L+K + ++ P+SS ++ SEFN++AS+IG
Sbjct: 3 STFRDRTVELHSLSQTLKKIGAIPSVHQDEDDPASSKRSSPG-------SEFNKKASRIG 55
Query: 62 LGIHHTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLVSNSR-N 120
LGI TSQK+ +LAKLAK++++F+D T+EIQELT +I+ DIT LN A+ DLQ + N
Sbjct: 56 LGIKETSQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLNMALSDLQTLQNMELA 115
Query: 121 DG-ISSDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDS- 178
DG S D H T V DDLK RLM ATK+ ++VLT R+EN+K HE+R+QLFS+ + DS
Sbjct: 116 DGNYSQDQVGHYTAVCDDLKTRLMGATKQLQDVLTTRSENMKAHENRKQLFSTKNAVDSP 175
Query: 179 ----ANPFVRQRPLATRSAAASTSSSP--PPWANGSPSSSQLFPRKQDGESQPLLQQQQH 232
A P ++ S P PP G+P SQL R+ E+ P
Sbjct: 176 PQNNAKSVPEPPPWSSSSNPFGNLQQPLLPPLNTGAPPGSQL-RRRSAIENAP------- 227
Query: 233 HQQQQHHQQQQQQQMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIR 292
Q + QQ VP Q++Y QSRA AL +VES I EL IF QLAT+V+QQGE+AIR
Sbjct: 228 ---SQQMEMSLLQQTVPKQENYSQSRAVALHSVESRITELSGIFPQLATMVTQQGELAIR 284
Query: 293 IDENMDDTMANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMIFLFFVA 344
ID+NMD+++ NVEGA+ ALL++L ISSNRWLM+KIF V+I FL++FLFFVA
Sbjct: 285 IDDNMDESLVNVEGARSALLQHLTRISSNRWLMMKIFAVIILFLIVFLFFVA 336
>sp|Q08DB5|STX5_BOVIN Syntaxin-5 OS=Bos taurus GN=STX5 PE=2 SV=1
Length = 355
Score = 184 bits (467), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 169/320 (52%), Gaps = 38/320 (11%)
Query: 9 SFRDRTFEFQSVAERLRKTVSSQNGPSSSSKADEQRSAVTLQSEFNRRASKIGLGIHHTS 68
S RDRT EF S + L+ S QNG ++ A AV +SEF A +IG + +T
Sbjct: 56 SCRDRTQEFLSACKSLQ---SRQNGIQANKPA---LRAVRQRSEFTLMAKRIGKDLSNTF 109
Query: 69 QKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLVSNSRNDGISSDTT 128
KL KL LAKR S+FDD +EI+ELT +IKQDI +LN + LQ ++
Sbjct: 110 AKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQ 169
Query: 129 SHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPL 188
+HS T+V L+++L S + +FK VL +RTENLK SRR+ FS V PL
Sbjct: 170 THSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAP--------VSALPL 221
Query: 189 A-TRSAAASTSSSPPPWANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQQHHQQQQQQQM 247
A + A+G + + R QQ Q+
Sbjct: 222 APNHLGGGAVVLGAESRASGDVAIDMMDSRT-----------------------SQQLQL 258
Query: 248 VPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGA 307
+ QDSY+QSRA+ +QN+ESTI ELG+IF QLA +V +Q E RIDEN+ +VE A
Sbjct: 259 IDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAA 318
Query: 308 QGALLKYLNSISSNRWLMIK 327
+LKY S++SNRWLM+K
Sbjct: 319 HSEILKYFQSVTSNRWLMVK 338
>sp|Q8K1E0|STX5_MOUSE Syntaxin-5 OS=Mus musculus GN=Stx5 PE=1 SV=3
Length = 355
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 172/334 (51%), Gaps = 50/334 (14%)
Query: 1 MPVKAAQTSFRDRTFEFQSVAERLRKTVSSQNGPSSSSKADEQRSAVTLQSEFNRRASKI 60
+P S RDRT EFQS + L+ S QNG +S A A SEF A +I
Sbjct: 48 VPSPPDTMSCRDRTQEFQSACKSLQ---SRQNGIQTSKPA---LHAARQCSEFTLMARRI 101
Query: 61 GLGIHHTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLVSNSRN 120
G + +T KL KL LAKR S+FDD +EI+ELT +IKQDI +LN + LQ ++
Sbjct: 102 GKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKG 161
Query: 121 DGISSDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSAN 180
+HS T+V L+++L S + +FK VL +RTENLK +RR+ FS
Sbjct: 162 SQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFSRAP------ 215
Query: 181 PFVRQRPLATRSAAASTSSSPPPWANGSPSSS-------QLFPRKQDGESQPLLQQQQHH 233
V PLA + P G+ S + + PR
Sbjct: 216 --VSALPLAPNNLGGG------PIILGAESRASRDVAIDMMDPRT--------------- 252
Query: 234 QQQQHHQQQQQQQMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRI 293
QQ Q++ QDSY+QSRA+ +QN+ESTI ELG+IF QLA +V +Q E RI
Sbjct: 253 --------SQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRI 304
Query: 294 DENMDDTMANVEGAQGALLKYLNSISSNRWLMIK 327
DEN+ +VE A +LKY S++SNRWLM+K
Sbjct: 305 DENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVK 338
>sp|Q13190|STX5_HUMAN Syntaxin-5 OS=Homo sapiens GN=STX5 PE=1 SV=2
Length = 355
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 171/324 (52%), Gaps = 46/324 (14%)
Query: 9 SFRDRTFEFQSVAERLRKTVSSQNGPSSSSKADEQRSAVTLQSEFNRRASKIGLGIHHTS 68
S RDRT EF S + L+ + QNG ++ A AV +SEF A +IG + +T
Sbjct: 56 SCRDRTQEFLSACKSLQ---TRQNGIQTNKPA---LRAVRQRSEFTLMAKRIGKDLSNTF 109
Query: 69 QKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLVSNSRNDGISSDTT 128
KL KL LAKR S+FDD +EI+ELT +IKQDI +LN + LQ ++
Sbjct: 110 AKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQ 169
Query: 129 SHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPL 188
+HS T+V L+++L S + +FK VL +RTENLK SRR+ FS V PL
Sbjct: 170 THSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAP--------VSALPL 221
Query: 189 ATRSAAASTSSSPPPWANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQ-----QHHQQQQ 243
A P G+ +L + H + + Q
Sbjct: 222 A-----------PNHLGGGA----------------VVLGAESHASKDVAIDMMDSRTSQ 254
Query: 244 QQQMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMAN 303
Q Q++ QDSY+QSRA+ +QN+ESTI ELG+IF QLA +V +Q E RIDEN+ +
Sbjct: 255 QLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLD 314
Query: 304 VEGAQGALLKYLNSISSNRWLMIK 327
VE A +LKY S++SNRWLM+K
Sbjct: 315 VEAAHSEILKYFQSVTSNRWLMVK 338
>sp|Q08851|STX5_RAT Syntaxin-5 OS=Rattus norvegicus GN=Stx5 PE=1 SV=2
Length = 355
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 172/333 (51%), Gaps = 48/333 (14%)
Query: 1 MPVKAAQTSFRDRTFEFQSVAERLRKTVSSQNGPSSSSKADEQRSAVTLQSEFNRRASKI 60
+P S RDRT EF S + L+ S QNG ++ A A SEF A +I
Sbjct: 48 VPSPPDTMSCRDRTQEFLSACKSLQ---SRQNGIQTNKPA---LHATRQCSEFTLMARRI 101
Query: 61 GLGIHHTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLVSNSRN 120
G + +T KL KL LAKR S+FDD +EI+ELT +IKQDI +LN + LQ ++
Sbjct: 102 GKDLSNTFAKLEKLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKG 161
Query: 121 DGISSDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSAN 180
+HS T+V L+++L S + +FK VL +RTENLK +RR+ FS
Sbjct: 162 SQSGRHLQTHSNTIVVSLQSKLASMSNDFKSVLEVRTENLKQQRNRREQFS--------- 212
Query: 181 PFVRQRPLATRSAAASTSSSPPPWANGSPSSSQ------LFPRKQDGESQPLLQQQQHHQ 234
+ P++ A + P G +S+ + PR
Sbjct: 213 ----RAPVSALPLAPNNLGGGPIVLGGESRASRDVAIDMMDPRT---------------- 252
Query: 235 QQQHHQQQQQQQMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRID 294
QQ Q++ QDSY+QSRA+ +QN+ESTI ELG+IF QLA +V +Q E RID
Sbjct: 253 -------SQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRID 305
Query: 295 ENMDDTMANVEGAQGALLKYLNSISSNRWLMIK 327
EN+ +VE A +LKY S++SNRWLM+K
Sbjct: 306 ENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVK 338
>sp|O13644|SED5_SCHPO Integral membrane protein sed5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sed5 PE=3 SV=1
Length = 309
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 189/343 (55%), Gaps = 48/343 (13%)
Query: 9 SFRDRTFEFQSVA----ERLRKTVSSQ--NGPSSSSKADEQRSAVTLQSEFNRRASKIGL 62
SF+DRT EFQ+ RLR T ++Q GP + +SEF R A KI
Sbjct: 2 SFQDRTAEFQACVTKTRSRLRTTTANQAVGGPDQTKHQ---------KSEFTRIAQKIAN 52
Query: 63 GIHHTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQ-LVSNSRND 121
I+ T +KL KL++LAKR ++FDD +EIQELT IKQ +++LNS + LQ +V +RN
Sbjct: 53 QINQTGEKLQKLSQLAKRKTLFDDRPVEIQELTFQIKQSLSSLNSDIASLQQVVKGNRNK 112
Query: 122 GISSDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANP 181
+ HS VV L+N L + + FK++L +RT+N+K ++R + F +++S + ANP
Sbjct: 113 --PAQMNQHSENVVVSLQNSLANTSMTFKDILEIRTQNMKASQNRTEKFVASSSMN-ANP 169
Query: 182 FVRQRPLATRSAAASTSSSPPPWANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQQHHQQ 241
+ + + + P P AN S L DG +
Sbjct: 170 LINS---GNSISPFADYNDPKPEANEDYLSLNL----GDGANT----------------- 205
Query: 242 QQQQQMVPLQ---DSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMD 298
+ +QM L+ D+Y Q R ++QN+ESTI ELG IF+QLA +VS+Q E RID + D
Sbjct: 206 -RYEQMALLESQTDTYSQQRMSSIQNIESTITELGGIFSQLAQMVSEQRETVQRIDMHTD 264
Query: 299 DTMANVEGAQGALLKYLNSISSNRWLMIKIF-FVLIFFLMIFL 340
D ++N+ AQ ++K+ +SSNR L+ KIF V+IFFL+ L
Sbjct: 265 DIVSNIGSAQREIVKFYERMSSNRALLFKIFGIVIIFFLLWVL 307
>sp|Q24509|STX5_DROME Syntaxin-5 OS=Drosophila melanogaster GN=Syx5 PE=2 SV=2
Length = 467
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 168/320 (52%), Gaps = 31/320 (9%)
Query: 11 RDRTFEFQSVAERLRKTVSSQNGPSSSSKADEQRSA-VTLQSEFNRRASKIGLGIHHTSQ 69
RDRT EF + L+ ++N + + D +++ V SEF A IG I T
Sbjct: 161 RDRTGEFANAIRSLQ----ARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYA 216
Query: 70 KLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLVS-NSRNDGISSDTT 128
KL KL LAK+ S+FDD EIQELT +IK D+ ALN + LQ +S + R
Sbjct: 217 KLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQIARLQDISKDQRRHTNGKHLV 276
Query: 129 SHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPL 188
SHS+ +V L+++L S + +FK++L +RTENLK ++RR FS PL
Sbjct: 277 SHSSNMVLALQSKLASMSTDFKQILEVRTENLKQQKTRRDQFSQGPG-----------PL 325
Query: 189 ATRSAAASTSSSPPPWANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQQHHQQQQQQQMV 248
A + + ST+ + + + D + PLL Q Q +
Sbjct: 326 AAHTVSPSTAKQGSLLLSEENQAVSIDMGSSD--TTPLLSTQT------------QMAIY 371
Query: 249 PLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQ 308
D+Y+Q RAE +QN+ESTI ELG IF QLA +V +Q EI RID N+ D N+E A
Sbjct: 372 DDSDNYVQQRAETMQNIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAH 431
Query: 309 GALLKYLNSISSNRWLMIKI 328
G +LKY S+S NRWLMIKI
Sbjct: 432 GEILKYFQSVSKNRWLMIKI 451
>sp|Q20797|STX3_CAEEL Putative syntaxin-3 OS=Caenorhabditis elegans GN=syn-3 PE=3 SV=1
Length = 413
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 170/318 (53%), Gaps = 32/318 (10%)
Query: 11 RDRTFEFQSVAERLRKTVSSQNGPSSSSKADEQRSAVTLQSEFNRRASKIGLGIHHTSQK 70
RDRT EF++ A+ ++ NG K + +V +FN+ A +IG + T K
Sbjct: 110 RDRTSEFRATAKSYEMKAAA-NGIRPQPKHEMLSESV----QFNQLAKRIGKELSQTCAK 164
Query: 71 LAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQLVSNSRNDGISSDTTSH 130
+ KLA+ AK+ S +++ + +I L++++K DIT LN + LQ S R + + + H
Sbjct: 165 MEKLAEYAKKKSCYEERS-QIDHLSSIVKSDITGLNKQIGQLQEFSKRRAGNMKNQNSGH 223
Query: 131 STTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPLAT 190
VV L+++L + K+++ VL + TE +K ++RR FSS A+ P+
Sbjct: 224 IQLVVVGLQSKLANVGKDYQSVLEISTETMKAEKNRRDKFSSGAAV----------PMGL 273
Query: 191 RSAAASTSSSPPPWANGSPSSSQLF-PRKQDGESQPLLQQQQHHQQQQHHQQQQQQQMVP 249
P ++G+ S+L +Q G S L Q QQ QQ+
Sbjct: 274 -----------PSSSSGANVRSKLLQDDEQHGSSSIALDMGALSNMQS--QQTMQQRDSS 320
Query: 250 LQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQG 309
L+ Y Q+R+ + +E +I ELG IF+QLA+LVS+QGE+ RID N++DT N++ A
Sbjct: 321 LE--YAQARSNTMATIEGSISELGQIFSQLASLVSEQGEMITRIDSNVEDTALNIDMAHS 378
Query: 310 ALLKYLNSISSNRWLMIK 327
L++YL +IS NRWLMI+
Sbjct: 379 ELVRYLQNISKNRWLMIQ 396
>sp|Q01590|SED5_YEAST Integral membrane protein SED5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SED5 PE=1 SV=1
Length = 340
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 150/284 (52%), Gaps = 18/284 (6%)
Query: 51 SEFNRRASKIGLGIHHTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVV 110
SEF ++AS I I T+Q L+KLA LAKR +F+D +EI EL+ +IK+ I A+ ++V
Sbjct: 52 SEFQKKASGIAHEISSTAQLLSKLAVLAKRKPMFNDNPVEIAELSFLIKRKIYAIEQSLV 111
Query: 111 DLQLVSNSRNDGISSDTTS-------HSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVH 163
L + + +G +S+ +S HS VV+ L ++ + + FK+VL R +
Sbjct: 112 QLSQLKKTDVNGNTSNQSSKQPSAVQHSKNVVNLLNTQMKNISGSFKDVLEERQRLEMAN 171
Query: 164 ESRRQLFSSTASKDSANPFVRQRPLATRSAAASTSSSPPPWANGSPSSSQLFPRKQDGES 223
+ R Q ++ D+ + + + +A +T + N +P + L + +
Sbjct: 172 KDRWQKLTT----DTGHAPADDQTQSNHAADLTT------YNNSNPFMTSLLDESSEKNN 221
Query: 224 QPLLQQQQHHQQQQHHQQQQQQQMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLV 283
Q + Q ++ + + Y+Q R A++ +ESTI E+GN+F QLA++V
Sbjct: 222 NSSNQGELSFPQNDSQLMLMEEGQLS-NNVYLQERNRAVETIESTIQEVGNLFQQLASMV 280
Query: 284 SQQGEIAIRIDENMDDTMANVEGAQGALLKYLNSISSNRWLMIK 327
+QGE+ RID N+DD N+ GAQ LLKY + I SNRWL K
Sbjct: 281 QEQGEVIQRIDANVDDIDLNISGAQRELLKYFDRIKSNRWLAAK 324
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 60 IGLGIHHTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVIKQDITALNSAVVDLQ--LVSN 117
+G I + S A+LA+ F+D I E+T ++ + + + D Q L ++
Sbjct: 2153 LGTAIANISSATIVGARLARNKKEFND----INEITKMLNDEENSFGNVFGDAQDILTNS 2208
Query: 118 SRNDGISSDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHESRRQLFSSTASKD 177
++ T +HS V KN ++ T+ +EV+ R + + +S R L +
Sbjct: 2209 TQIQNKLVRTKTHSQNSVSSAKNITLNGTEFLQEVMK-RAQ--RARQSVRSLAEIALAIG 2265
Query: 178 SANPFVRQRPLATRSAAASTSSSPPPWANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQQ 237
S++ V P + A + + A+ P +Q P K + E Q +Q++ +Q
Sbjct: 2266 SSSKAVNVDPRLLKEAEETLMTLEAASADQYPEKAQTVPGKLE-EIQKKIQEETEKLDKQ 2324
Query: 238 HHQQQQQQQMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENM 297
+ Q++ +Y+ S + L+ +S + NI L L + +A +
Sbjct: 2325 KETFEAQKKRAEELAAYLNSAQQLLKESKSKADKSNNIAKML-QLTKVENLVAA-----I 2378
Query: 298 DDTMANVEGAQGALLK 313
D + VE A+G K
Sbjct: 2379 TDDLERVEAAKGEFQK 2394
>sp|Q08144|TLG2_YEAST T-SNARE affecting a late Golgi compartment protein 2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TLG2 PE=1 SV=1
Length = 397
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 241 QQQQQQMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDT 300
Q+QQQ ++Y++ R E + + + E+ IF ++ LV QG I RID N+++T
Sbjct: 233 QRQQQLHDTSAEAYLRERDEEITQLARGVLEVSTIFREMQDLVVDQGTIVDRIDYNLENT 292
Query: 301 MANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMIFLFFV 343
+ ++ A L K + R K+ +L ++ FFV
Sbjct: 293 VVELKSADKELNKATH--YQKRTQKCKVILLLTLCVIALFFFV 333
>sp|O65359|SYP41_ARATH Syntaxin-41 OS=Arabidopsis thaliana GN=SYP41 PE=1 SV=1
Length = 322
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 258 RAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNS 317
R + +Q V ++++L I L+ LV QG I RID N+++ VE L K +
Sbjct: 232 REKEIQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQKAERT 291
Query: 318 ISSNRWLMIKIFFVLIFFLMIFLFFV 343
+ V++ F+M+ L +
Sbjct: 292 QRHGGMVKCASVLVILCFIMLLLLIL 317
>sp|Q12241|VAM3_YEAST Syntaxin VAM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=VAM3 PE=1 SV=1
Length = 283
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 256 QSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLK 313
Q R++ + + + + E+ IF+QL +LV +QGE IDEN+ N++ A L +
Sbjct: 194 QERSQQIGRIHTAVQEVNAIFHQLGSLVKEQGEQVTTIDENISHLHDNMQNANKQLTR 251
>sp|Q39233|SYP21_ARATH Syntaxin-21 OS=Arabidopsis thaliana GN=SYP21 PE=1 SV=1
Length = 279
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 234 QQQQHHQQQQQQQMVPL------QDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQG 287
QQQ Q ++Q++V L ++ ++ R + ++ +E I ++ +F LA +V+ QG
Sbjct: 162 QQQALLLQSRRQEVVFLDNEITFNEAIIEEREQGIREIEDQIRDVNGMFKDLALMVNHQG 221
Query: 288 EIAIRIDENMDDTMANVEGAQGALLKYLNSISSNRWLMIKIFFVLIF 334
I I N+D++ A A L K + SN L +LIF
Sbjct: 222 NIVDDISSNLDNSHAATTQATVQLRKAAKTQRSNSSLT--CLLILIF 266
>sp|G3V7P1|STX12_RAT Syntaxin-12 OS=Rattus norvegicus GN=Stx12 PE=1 SV=1
Length = 274
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 233 HQQQQHHQQQQQQQMVPLQD-SYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAI 291
H++ Q Q+++ + QD ++ R A+Q +E+ I ++ IF LA ++ QG++
Sbjct: 158 HEEWNQMQSQEEEAAITEQDLELIKERETAIQQLEADILDVNQIFKDLAMMIHDQGDLID 217
Query: 292 RIDENMDDTMANVEGAQGAL 311
I+ N++ + +VE A L
Sbjct: 218 SIEANVESSEVHVERASDQL 237
>sp|P32854|PEP12_YEAST Syntaxin PEP12 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PEP12 PE=1 SV=2
Length = 288
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 251 QDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGA 310
Q + ++ R + + N+E I EL +F L ++V QQG + I+ N+ T N + A
Sbjct: 194 QQNLIEQRDQEISNIERGITELNEVFKDLGSVVQQQGVLVDNIEANIYTTSDNTQLASDE 253
Query: 311 LLKYLN-SISSNRW 323
L K + ++RW
Sbjct: 254 LRKAMRYQKRTSRW 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.124 0.334
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,436,690
Number of Sequences: 539616
Number of extensions: 3770692
Number of successful extensions: 79510
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 506
Number of HSP's that attempted gapping in prelim test: 34353
Number of HSP's gapped (non-prelim): 17313
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)