Your job contains 1 sequence.
>019258
MAITGVRTPPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPA
SLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISG
VDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGL
QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW
QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVE
QGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019258
(343 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126689 - symbol:AT4G30840 "AT4G30840" species... 936 4.8e-94 1
MGI|MGI:1917162 - symbol:Nup43 "nucleoporin 43" species:1... 147 1.5e-07 1
RGD|1596513 - symbol:Nup43 "nucleoporin 43" species:10116... 146 2.0e-07 1
ZFIN|ZDB-GENE-040426-2533 - symbol:nup43 "nucleoporin 43"... 141 6.9e-07 1
FB|FBgn0038609 - symbol:Nup43 "Nucleoporin 43kD" species:... 137 8.1e-07 2
UNIPROTKB|F1P643 - symbol:NUP43 "Uncharacterized protein"... 140 9.4e-07 1
UNIPROTKB|Q8NFH3 - symbol:NUP43 "Nucleoporin Nup43" speci... 140 9.4e-07 1
UNIPROTKB|F1S7T5 - symbol:NUP43 "Uncharacterized protein"... 139 1.2e-06 1
UNIPROTKB|A3KMW1 - symbol:NUP43 "NUP43 protein" species:9... 130 1.2e-05 1
UNIPROTKB|E1C370 - symbol:NUP43 "Uncharacterized protein"... 129 1.6e-05 1
>TAIR|locus:2126689 [details] [associations]
symbol:AT4G30840 "AT4G30840" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
InterPro:IPR001680 InterPro:IPR015943 SMART:SM00320 GO:GO:0009507
GO:GO:0005635 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 EMBL:BT024890 IPI:IPI00517347 RefSeq:NP_567858.1
UniGene:At.31798 UniGene:At.75363 ProteinModelPortal:Q24JJ9
SMR:Q24JJ9 STRING:Q24JJ9 PRIDE:Q24JJ9 EnsemblPlants:AT4G30840.1
GeneID:829208 KEGG:ath:AT4G30840 TAIR:At4g30840
HOGENOM:HOG000005951 InParanoid:Q24JJ9 OMA:CAINSFD PhylomeDB:Q24JJ9
ProtClustDB:CLSN2689692 Genevestigator:Q24JJ9 Uniprot:Q24JJ9
Length = 361
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 186/295 (63%), Positives = 223/295 (75%)
Query: 66 SQWTPPTRISSLST--------SHQSLVAASTLSGSLHVL------SSAMQVLLSVDENS 111
S WT P+R+SSL S + +V+A+T SGSLHVL +A++ + E
Sbjct: 72 SSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEFYAA-EGE 130
Query: 112 GFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGG-G-EFKRVYDGNGLVGFNCVKWASP 168
FHVG + GVD G ECV+VGEDGRVN+V ++ G G +++V+DGNGLV + VKWASP
Sbjct: 131 RFHVGRVEGVDWREGGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYRAVKWASP 190
Query: 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228
TEFVTGG+G+GLQ WD R++G V Q KGN+ QGK S ++HS+DIHPSRKHTC+AGG
Sbjct: 191 TEFVTGGYGFGLQLWDQRKSGEA--VSQLKGNW-FQGKTSAIVHSIDIHPSRKHTCIAGG 247
Query: 229 SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAM 288
SSGTVFAWDLRW QQ IVLSGVG E + + LSESEVWEVQYD +TKS N+SSSR+LP M
Sbjct: 248 SSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKS-NVSSSRILPVM 306
Query: 289 FCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP 343
CSEDGIL ++EQGEEP ELLAEPCAINSFDID QNP DVICSLEWESIA+ SRP
Sbjct: 307 TCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFSRP 361
Score = 193 (73.0 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 58/164 (35%), Positives = 78/164 (47%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPH----- 65
QVHR PQSKY+D VRWLP S L++ A YD D DS S+E S+ P H
Sbjct: 9 QVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLD-PNPRGNHNTNPL 67
Query: 66 ----SQWTPPTRISSLST--------SHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGF 113
S WT P+R+SSL S + +V+A+T SGSLHVL + +++E F
Sbjct: 68 IESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEE---F 124
Query: 114 HVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL 157
+ + E V E G V G ++ +G GL
Sbjct: 125 YAAEGERFHVGRVEGVDWREGGECVTVGEDGRVNVVKIVNGEGL 168
>MGI|MGI:1917162 [details] [associations]
symbol:Nup43 "nucleoporin 43" species:10090 "Mus musculus"
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1917162 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 GO:GO:0051028 GO:GO:0000777
GO:GO:0031080 eggNOG:NOG270547 KO:K14305 CTD:348995
HOGENOM:HOG000007964 HOVERGEN:HBG052696 OMA:QWTAAHY EMBL:AK090019
EMBL:AC156391 IPI:IPI00177202 RefSeq:NP_663752.2 UniGene:Mm.299887
ProteinModelPortal:P59235 SMR:P59235 STRING:P59235
PhosphoSite:P59235 PaxDb:P59235 PRIDE:P59235
Ensembl:ENSMUST00000040135 GeneID:69912 KEGG:mmu:69912
UCSC:uc007eid.2 GeneTree:ENSGT00390000004803 InParanoid:P59235
OrthoDB:EOG4TMR2F NextBio:330593 Bgee:P59235 CleanEx:MM_NUP43
Genevestigator:P59235 GermOnline:ENSMUSG00000040034 Uniprot:P59235
Length = 380
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 62/204 (30%), Positives = 88/204 (43%)
Query: 82 QSLVAASTLSGSLHV-LSSAMQVLLSVDEN---SGFHVGP----ISGVDLTGSEC----- 128
+ +VAAS+ +G + V L LSV++ + +H GP S TG C
Sbjct: 86 ERIVAASS-TGCVTVFLHHPNNQTLSVNQQWPAAHYHTGPSSPSYSSAPCTGIVCDNPEI 144
Query: 129 VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT-GGFGYGLQWWDLRR 187
V+VGEDGR+NL V E R D + V + E VT G L+ WD R+
Sbjct: 145 VTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVNSIGQ-LKIWDFRQ 202
Query: 188 AGSGG-PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246
GS +L G+ +H VD HP ++H GG G + WD+R +
Sbjct: 203 QGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLSIWDVRQGTMPVS 255
Query: 247 LSGVGTGEAVTHSLSESEVWEVQY 270
L H E+E+WEV +
Sbjct: 256 L-------LKAH---EAEMWEVHF 269
>RGD|1596513 [details] [associations]
symbol:Nup43 "nucleoporin 43" species:10116 "Rattus norvegicus"
[GO:0031080 "nuclear pore outer ring" evidence=ISO] [GO:0000776
"kinetochore" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1596513 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 HOVERGEN:HBG052696 EMBL:BC158756
IPI:IPI00764271 UniGene:Rn.216533 ProteinModelPortal:B0BNB5
Genevestigator:B0BNB5 Uniprot:B0BNB5
Length = 378
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 62/204 (30%), Positives = 87/204 (42%)
Query: 82 QSLVAASTLSGSLHV-LSSAMQVLLSVDEN---SGFHVGP----ISGVDLTGSEC----- 128
+ +VAAS+ +G + V L LSV + + +H GP S TG C
Sbjct: 86 ERIVAASS-TGCVTVFLHHPNNQTLSVSQQWPTAHYHTGPGSPSYSSAPCTGIVCDNPEI 144
Query: 129 VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT-GGFGYGLQWWDLRR 187
V+VGEDGR+NL V E R D + V + E VT G L+ WD R+
Sbjct: 145 VTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVNSIGQ-LKIWDFRQ 202
Query: 188 AGSGG-PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246
GS +L G+ +H VD HP ++H GG G + WD+R +
Sbjct: 203 QGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLSIWDVRQGTMPVS 255
Query: 247 LSGVGTGEAVTHSLSESEVWEVQY 270
L H E+E+WEV +
Sbjct: 256 L-------LKAH---EAEMWEVHF 269
>ZFIN|ZDB-GENE-040426-2533 [details] [associations]
symbol:nup43 "nucleoporin 43" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2533
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K14305 CTD:348995 HOVERGEN:HBG052696
EMBL:BC066616 IPI:IPI00489133 RefSeq:NP_998057.1 UniGene:Dr.85700
ProteinModelPortal:Q6NYF4 STRING:Q6NYF4 PRIDE:Q6NYF4 GeneID:405828
KEGG:dre:405828 InParanoid:Q6NYF4 NextBio:20817791
ArrayExpress:Q6NYF4 Bgee:Q6NYF4 Uniprot:Q6NYF4
Length = 372
Score = 141 (54.7 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 63/204 (30%), Positives = 93/204 (45%)
Query: 84 LVAASTLSGSLHV--LSSAMQVL-LS-VDENS---GFHVGPISGVDLTGSECVSVGEDGR 136
LV+AS+ SG++ + L S Q L L+ V E + + P + + E VSVGEDGR
Sbjct: 88 LVSASS-SGAVSIFKLQSDCQALSLAHVWERAHRCSCNNAPCTAIVCRSPEIVSVGEDGR 146
Query: 137 VNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT-GGFGYGLQWWDLRR-AGSGGPV 194
V L E RV + + V + TE +T G L+ WD R+ + S +
Sbjct: 147 VILYKA-DQAEVTRVIENADSSTIHAVTFLRTTEVLTVNSIGQ-LKMWDFRQQSDSPAQI 204
Query: 195 LQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGE 254
L G+ +H VD HP+++H GG G + WD+R L+ E
Sbjct: 205 LSLTGD-------RMPLHCVDKHPNQQHIVATGGQDGMLCIWDVRQGNTPFSLT-----E 252
Query: 255 AVTHSLSESEVWEVQYDCHTKSSN 278
A HS +E+WEV + H + N
Sbjct: 253 A--HS---AEMWEVHF--HPSNPN 269
>FB|FBgn0038609 [details] [associations]
symbol:Nup43 "Nucleoporin 43kD" species:7227 "Drosophila
melanogaster" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0007067 "mitosis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 KO:K14305 CTD:348995 OMA:QWTAAHY
GeneTree:ENSGT00390000004803 FlyBase:FBgn0038609 ChiTaRS:Nup43
RefSeq:NP_650716.2 UniGene:Dm.20212 ProteinModelPortal:Q9VE85
SMR:Q9VE85 IntAct:Q9VE85 MINT:MINT-1583828 STRING:Q9VE85
PRIDE:Q9VE85 EnsemblMetazoa:FBtr0083577 GeneID:42209
KEGG:dme:Dmel_CG7671 UCSC:CG7671-RA InParanoid:Q9VE85
PhylomeDB:Q9VE85 GenomeRNAi:42209 NextBio:827679 Bgee:Q9VE85
Uniprot:Q9VE85
Length = 358
Score = 137 (53.3 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 35/123 (28%), Positives = 59/123 (47%)
Query: 117 PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGF 176
P + + + G++ + GEDG V++VSV + KR + + + F+ + + S E VT
Sbjct: 131 PCTDLSVYGTDIATAGEDGCVSIVSVENVRQVKRQIEADSMALFS-ICYISQQELVTANR 189
Query: 177 GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAW 236
++ D R A P F SQ S + S+ HP ++H L G G++ W
Sbjct: 190 MGVIRMLDARVATEAQPKTTFM--VASQDDKSNFVSSLAKHPMQQHILLCGSEEGSITVW 247
Query: 237 DLR 239
D+R
Sbjct: 248 DMR 250
Score = 42 (19.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTD 45
S+ + VRWLP S+ V +D D
Sbjct: 12 SEKVSQVRWLPEELQQSERFVTGSWDMD 39
>UNIPROTKB|F1P643 [details] [associations]
symbol:NUP43 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000776 "kinetochore" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0000776 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K14305 CTD:348995 OMA:QWTAAHY
GeneTree:ENSGT00390000004803 EMBL:AAEX03000265 RefSeq:XP_541148.2
ProteinModelPortal:F1P643 Ensembl:ENSCAFT00000000620 GeneID:484031
KEGG:cfa:484031 Uniprot:F1P643
Length = 380
Score = 140 (54.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 46/156 (29%), Positives = 67/156 (42%)
Query: 117 PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT-GG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 133 PCTGVVCNSPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNS 191
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
G L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 192 IGQ-LKIWDFRKQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQY 270
WD+R + L H E+E+WEV +
Sbjct: 244 IWDVRQGTMPVSL-------LKAH---EAEMWEVHF 269
>UNIPROTKB|Q8NFH3 [details] [associations]
symbol:NUP43 "Nucleoporin Nup43" species:9606 "Homo
sapiens" [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0007059
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
GO:GO:0015031 GO:GO:0005975 GO:GO:0019221 GO:GO:0015758
GO:GO:0010827 GO:GO:0055085 GO:GO:0051028 GO:GO:0000236
GO:GO:0000777 GO:GO:0031080 eggNOG:NOG270547 KO:K14305
EMBL:AF514997 EMBL:BC065028 EMBL:AK023349 IPI:IPI00742943
RefSeq:NP_942590.1 UniGene:Hs.510375 ProteinModelPortal:Q8NFH3
SMR:Q8NFH3 IntAct:Q8NFH3 STRING:Q8NFH3 PhosphoSite:Q8NFH3
DMDM:27923819 PaxDb:Q8NFH3 PRIDE:Q8NFH3 DNASU:348995
Ensembl:ENST00000340413 Ensembl:ENST00000460354 GeneID:348995
KEGG:hsa:348995 UCSC:uc003qmz.3 CTD:348995 GeneCards:GC06M150087
HGNC:HGNC:21182 HPA:HPA027126 HPA:HPA027291 HPA:HPA028500
MIM:608141 neXtProt:NX_Q8NFH3 PharmGKB:PA134930788
HOGENOM:HOG000007964 HOVERGEN:HBG052696 InParanoid:Q8NFH3
OMA:QWTAAHY PhylomeDB:Q8NFH3 GenomeRNAi:348995 NextBio:99471
ArrayExpress:Q8NFH3 Bgee:Q8NFH3 CleanEx:HS_NUP43
Genevestigator:Q8NFH3 GermOnline:ENSG00000120253 Uniprot:Q8NFH3
Length = 380
Score = 140 (54.3 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 59/204 (28%), Positives = 88/204 (43%)
Query: 82 QSLVAASTLSGSLHV-LSSAMQVLLSVDEN---SGFHVGP----ISGVDLTGSEC----- 128
+ +VAAS+ +G + V L LSV++ + +H GP S TG C
Sbjct: 86 ERIVAASS-TGCVTVFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEI 144
Query: 129 VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT-GGFGYGLQWWDLRR 187
V+VGEDGR+NL E R D + V + E +T G L+ WD R+
Sbjct: 145 VTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQ-LKIWDFRQ 202
Query: 188 AGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246
G+ +L G+ +H VD HP+++H GG G + WD+R +
Sbjct: 203 QGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVRQGTMPVS 255
Query: 247 LSGVGTGEAVTHSLSESEVWEVQY 270
L H E+E+WEV +
Sbjct: 256 L-------LKAH---EAEMWEVHF 269
>UNIPROTKB|F1S7T5 [details] [associations]
symbol:NUP43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K14305
CTD:348995 OMA:QWTAAHY GeneTree:ENSGT00390000004803 EMBL:CU571230
RefSeq:XP_001929004.1 UniGene:Ssc.52499 ProteinModelPortal:F1S7T5
Ensembl:ENSSSCT00000004540 GeneID:100154567 KEGG:ssc:100154567
Uniprot:F1S7T5
Length = 380
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/156 (28%), Positives = 70/156 (44%)
Query: 117 PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT-GG 175
P +GV E V+VGEDGR+NL K + + + + V + E +T
Sbjct: 133 PCTGVVCNSPEIVTVGEDGRINLFRADYKEAIKTIDNADSST-LHAVTFLRTPEILTVNS 191
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
G L+ WD R+ G+ +L G+ +A +H VD HP+++H GG G +
Sbjct: 192 IGQ-LKIWDFRQQGNEPSQILSLTGD-----RAP--LHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQY 270
WD+R + L H E+E+WEV +
Sbjct: 244 IWDVRQGTMPVSL-------LKAH---EAEMWEVHF 269
>UNIPROTKB|A3KMW1 [details] [associations]
symbol:NUP43 "NUP43 protein" species:9913 "Bos taurus"
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG270547
KO:K14305 CTD:348995 HOGENOM:HOG000007964 HOVERGEN:HBG052696
OMA:QWTAAHY GeneTree:ENSGT00390000004803 OrthoDB:EOG4TMR2F
EMBL:DAAA02027053 EMBL:BC133315 IPI:IPI00838240
RefSeq:NP_001096566.1 UniGene:Bt.30273 STRING:A3KMW1
Ensembl:ENSBTAT00000045398 GeneID:520174 KEGG:bta:520174
InParanoid:A3KMW1 NextBio:20873042 Uniprot:A3KMW1
Length = 380
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/155 (29%), Positives = 66/155 (42%)
Query: 117 PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT-GG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 133 PCTGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNS 191
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
G L+ WD R+ + P Q G + +H VD HP+++H GG G +
Sbjct: 192 IGQ-LKIWDFRQQRNE-PT-QILSLTGDRVP----LHCVDRHPNQQHVVATGGQDGMLSI 244
Query: 236 WDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQY 270
WD+R + L H E+E+WEV +
Sbjct: 245 WDVRQGTMPVSL-------LKAH---EAEMWEVHF 269
>UNIPROTKB|E1C370 [details] [associations]
symbol:NUP43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K14305
CTD:348995 OMA:QWTAAHY GeneTree:ENSGT00390000004803
EMBL:AADN02025353 IPI:IPI00600408 RefSeq:XP_419667.2
UniGene:Gga.8247 ProteinModelPortal:E1C370
Ensembl:ENSGALT00000020225 GeneID:421628 KEGG:gga:421628
NextBio:20824366 Uniprot:E1C370
Length = 374
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 47/153 (30%), Positives = 69/153 (45%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT-GGFG 177
+GV E V+VGEDGR+NL + R D + V + TE +T G
Sbjct: 134 TGVICNNPEIVTVGEDGRINLYRA-DQKDAVRTIDNADSSTLHAVTFLRTTEILTVNSIG 192
Query: 178 YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
L+ WD R+ + P Q F G + H VD HP+++H GG G + WD
Sbjct: 193 Q-LKIWDFRQQRNE-PA-QI---FSLTGDRVPL-HCVDRHPNQQHIVATGGQDGMLSIWD 245
Query: 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQY 270
+R Q ++ +S + EA E+WEV +
Sbjct: 246 IR--QGTMPVSLLNAHEA--------EMWEVHF 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 343 343 0.00096 116 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 622 (66 KB)
Total size of DFA: 262 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.14u 0.13s 30.27t Elapsed: 00:00:01
Total cpu time: 30.14u 0.13s 30.27t Elapsed: 00:00:01
Start: Sat May 11 06:16:15 2013 End: Sat May 11 06:16:16 2013