BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019258
(343 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224091841|ref|XP_002309368.1| predicted protein [Populus trichocarpa]
gi|222855344|gb|EEE92891.1| predicted protein [Populus trichocarpa]
Length = 360
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/366 (62%), Positives = 274/366 (74%), Gaps = 29/366 (7%)
Query: 1 MAITGVRTPPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPA 60
MA T + PP++HR PQ K+IDA+RWLP SP K + +++D+D +PSLE HS+
Sbjct: 1 MARTNLTEPPKIHRIPQPKFIDAIRWLPSPSPFRKSFITSLFDSDFHTPSLEIHSLDPSK 60
Query: 61 SLT-PHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSG------- 112
+LT P WTPP+RISSL ++ SL AAST GSLH+ + ++ + ++ SG
Sbjct: 61 TLTTPLLSWTPPSRISSLKST-PSLFAASTFLGSLHIFKTPEEMSVLGNDMSGLGSETSV 119
Query: 113 -----------FHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVG 159
FHVG I GVDL GSECVSVGEDGRVNLV GG F+RV+DGNGLV
Sbjct: 120 MEPVVSVVGREFHVGSIGGVDLMEGGSECVSVGEDGRVNLVVEKGG--FRRVFDGNGLVS 177
Query: 160 FNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
++ VKWASP+EFVTGG G+GLQWWDLR+ G+ V QFKG++ +G SG+IHS+DIHPS
Sbjct: 178 YSAVKWASPSEFVTGGCGFGLQWWDLRQPGAA--VAQFKGSW-DRGTTSGIIHSIDIHPS 234
Query: 220 RKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKS--S 277
RKHTCLAGGSSGTVFAWDLR QQ+ I+LS +G+ + +T LSESEVWEVQYD +TKS S
Sbjct: 235 RKHTCLAGGSSGTVFAWDLRRQQEPIILSSIGSSDTMTQPLSESEVWEVQYDYYTKSLNS 294
Query: 278 NISSSRVLPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESI 337
NISSSR+LPAM CSEDGILAV+EQGEEP ELLAEPCAINSFDID QNPSDVICSLEWESI
Sbjct: 295 NISSSRILPAMICSEDGILAVIEQGEEPTELLAEPCAINSFDIDRQNPSDVICSLEWESI 354
Query: 338 AIVSRP 343
I+SRP
Sbjct: 355 VILSRP 360
>gi|225445772|ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
gi|297743697|emb|CBI36580.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/359 (63%), Positives = 267/359 (74%), Gaps = 28/359 (7%)
Query: 7 RTPP----QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL 62
+ PP Q+HR PQS+YIDAVR+LP S L + AVLA++DT + SPSL+ HS LP S
Sbjct: 5 KAPPSHSLQIHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHS--LPKST 62
Query: 63 TPHSQWTPPTRISSLST-------SHQSLVAASTLSGSLHVL----SSAMQVLLSVDENS 111
P +SS + +H+ L+AAST SGSLH+L +++Q SV E S
Sbjct: 63 PPSLNLQSSLSLSSRVSSLSLSLSAHKPLIAASTFSGSLHILLLDFDASVQSEFSVPEKS 122
Query: 112 GFHVGPISGVDL--TGSECVSVGEDGRVNLVSVIGGGE--FKRVYDGNGLVGFNCVKWAS 167
HVG IS VDL +G ECVSVGEDGRVNLV+ G ++RV+D +GLV + KWAS
Sbjct: 123 -LHVGAISCVDLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWAS 181
Query: 168 PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG 227
PTEF TGGFG+GLQWWDLR+ G GPV QFKGN+ +Q SG++HS+DIHPSRKHTCLAG
Sbjct: 182 PTEFATGGFGFGLQWWDLRKPG--GPVSQFKGNW-AQRTTSGIVHSIDIHPSRKHTCLAG 238
Query: 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSN---ISSSRV 284
GS GTVFAWDLRWQQQ I+LSGVGT E THS ESEVWEV+YD + ++SN +SSSR+
Sbjct: 239 GSLGTVFAWDLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRI 298
Query: 285 LPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP 343
LPAM CSEDGILAVVEQGEEP ELLAEPCAINSFDID QNPSDVICSLEWESIAI+SRP
Sbjct: 299 LPAMLCSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSRP 357
>gi|297798886|ref|XP_002867327.1| WD-40 repeat protein family [Arabidopsis lyrata subsp. lyrata]
gi|297313163|gb|EFH43586.1| WD-40 repeat protein family [Arabidopsis lyrata subsp. lyrata]
Length = 362
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/357 (59%), Positives = 253/357 (70%), Gaps = 27/357 (7%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSI--------SLPASL 62
QVHR PQSKY+D VRWLP S L++ A YD D DS S+E S+ + +
Sbjct: 9 QVHRIPQSKYVDGVRWLPQASALNRFFATAFYDPDCDSSSIEIQSLDPNPKGNQNTNPLI 68
Query: 63 TPHSQWTPPTRISSLST--------SHQSLVAASTLSGSLHVL-----SSAMQVLLSVDE 109
S WT P+R+SSL S + +V+A+T SGSLHVL A + V E
Sbjct: 69 ESLSSWTTPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMVDLVEGAAIEEVYVAE 128
Query: 110 NSGFHVGPISGVD-LTGSECVSVGEDGRVNLVSVIGGG--EFKRVYDGNGLVGFNCVKWA 166
FHVG + GVD G ECV+VGEDGRVN+V ++ G +++V+DGNGLV + VKWA
Sbjct: 129 GERFHVGRVEGVDWREGGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYRAVKWA 188
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
SPTEFVTGG+G+GLQ WD R++G Q KGN+ QGK S ++HS+DIHPSRKHTC+A
Sbjct: 189 SPTEFVTGGYGFGLQLWDQRKSGEAAS--QLKGNW-FQGKTSAIVHSIDIHPSRKHTCIA 245
Query: 227 GGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLP 286
GGSSGTVFAWDLRW QQ IVLSGVG E + + LSESEVWEVQYD +TKS+NISSSR+LP
Sbjct: 246 GGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKSNNISSSRILP 305
Query: 287 AMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP 343
M CSEDGIL V+EQGEEP ELLAEPCAINSFDID QNP DVICSLEWESIA+ SRP
Sbjct: 306 VMTCSEDGILGVIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFSRP 362
>gi|255574970|ref|XP_002528391.1| conserved hypothetical protein [Ricinus communis]
gi|223532179|gb|EEF33984.1| conserved hypothetical protein [Ricinus communis]
Length = 354
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/353 (64%), Positives = 269/353 (76%), Gaps = 24/353 (6%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLT----PHS 66
++ R PQ KY+D++RWLP LSP + ++A +D+D D+PSLETHS+S +S T P S
Sbjct: 6 EIQRLPQFKYVDSIRWLPSLSPFQRSIIIAFFDSDTDAPSLETHSLSSTSSETLTLTPLS 65
Query: 67 QWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSG------FHVGPISG 120
WTPP+RISSL ++ SL+AA+T SGSLH+ +A + L S FHVGPI G
Sbjct: 66 SWTPPSRISSLKST-SSLIAAATFSGSLHIFPTAQESTLEPPRMSELLGGREFHVGPIRG 124
Query: 121 VDLT---GSECVSVGEDGRVNLVSVIGGGE-----FKRVYDGNGLVGFNCVKWASPTEFV 172
VD+ GSE VSVGEDGRVNLV V+G G+ +RV+DGNGLV ++ VKWAS TEFV
Sbjct: 125 VDVMEGGGSEVVSVGEDGRVNLVRVLGEGKTGINNCQRVFDGNGLVSYSAVKWASNTEFV 184
Query: 173 TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT 232
TGG G+GLQWWDLRR S V QFKG + QG +SG+IHS+DIH SRK+TCLAGGSSGT
Sbjct: 185 TGGCGFGLQWWDLRRPNSA--VAQFKGIW-DQGMSSGIIHSIDIHQSRKYTCLAGGSSGT 241
Query: 233 VFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSR--VLPAMFC 290
VFAWDLRW+ Q IVLSGV + THSLSES+VWEVQYDC+TKS + +SS +LPAM C
Sbjct: 242 VFAWDLRWKDQPIVLSGVELNDTATHSLSESDVWEVQYDCYTKSLSSNSSSSCILPAMIC 301
Query: 291 SEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP 343
SEDGILAV+EQGEEP ELLAEPCAINSFDID QNPSDVICSLEWESIAI+SRP
Sbjct: 302 SEDGILAVIEQGEEPIELLAEPCAINSFDIDCQNPSDVICSLEWESIAIISRP 354
>gi|18417678|ref|NP_567858.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|90093296|gb|ABD85161.1| At4g30840 [Arabidopsis thaliana]
gi|332660417|gb|AEE85817.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
Length = 361
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/359 (59%), Positives = 255/359 (71%), Gaps = 32/359 (8%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPH----- 65
QVHR PQSKY+D VRWLP S L++ A YD D DS S+E S+ P H
Sbjct: 9 QVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLD-PNPRGNHNTNPL 67
Query: 66 ----SQWTPPTRISSLST--------SHQSLVAASTLSGSLHVL------SSAMQVLLSV 107
S WT P+R+SSL S + +V+A+T SGSLHVL +A++ +
Sbjct: 68 IESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEFYAA 127
Query: 108 DENSGFHVGPISGVD-LTGSECVSVGEDGRVNLVSVIGGG--EFKRVYDGNGLVGFNCVK 164
E FHVG + GVD G ECV+VGEDGRVN+V ++ G +++V+DGNGLV + VK
Sbjct: 128 -EGERFHVGRVEGVDWREGGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYRAVK 186
Query: 165 WASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTC 224
WASPTEFVTGG+G+GLQ WD R++G V Q KGN+ QGK S ++HS+DIHPSRKHTC
Sbjct: 187 WASPTEFVTGGYGFGLQLWDQRKSGEA--VSQLKGNW-FQGKTSAIVHSIDIHPSRKHTC 243
Query: 225 LAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRV 284
+AGGSSGTVFAWDLRW QQ IVLSGVG E + + LSESEVWEVQYD +TK SN+SSSR+
Sbjct: 244 IAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTK-SNVSSSRI 302
Query: 285 LPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP 343
LP M CSEDGIL ++EQGEEP ELLAEPCAINSFDID QNP DVICSLEWESIA+ SRP
Sbjct: 303 LPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFSRP 361
>gi|21554881|gb|AAM63718.1| unknown [Arabidopsis thaliana]
Length = 358
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/359 (59%), Positives = 256/359 (71%), Gaps = 32/359 (8%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPH----- 65
QVHR PQSKY+D VRWLP S L++ A YD D DS S+E S+ P H
Sbjct: 6 QVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLD-PNPRGNHNTNPL 64
Query: 66 ----SQWTPPTRISSLST--------SHQSLVAASTLSGSLHVL------SSAMQVLLSV 107
S WT P+R+SSL S + +V+A+T SGSLHVL +A++ + +
Sbjct: 65 IESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEVYAA 124
Query: 108 DENSGFHVGPISGVD-LTGSECVSVGEDGRVNLVSVIGGG--EFKRVYDGNGLVGFNCVK 164
E FHVG + GVD G ECV+VGEDGRVN+V ++ G +++V+DGNGLV + VK
Sbjct: 125 -EGERFHVGRVEGVDWREGGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYRAVK 183
Query: 165 WASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTC 224
WASPTEFVTGG+G+GLQ WD R++G V Q KGN+ QGK S ++HS+DIHPSRKHTC
Sbjct: 184 WASPTEFVTGGYGFGLQLWDQRKSGEA--VSQLKGNW-FQGKTSAIVHSIDIHPSRKHTC 240
Query: 225 LAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRV 284
+AGGSSGTVFAWDLRW QQ IVLSGVG E + + LSESEVWEVQYD +TK SN+SSSR+
Sbjct: 241 IAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTK-SNVSSSRI 299
Query: 285 LPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP 343
LP M CSEDGIL ++EQGEEP ELLAEPCAINSFDID QNP DVICSLEWESIA+ SRP
Sbjct: 300 LPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFSRP 358
>gi|449453944|ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
gi|449511548|ref|XP_004163987.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
Length = 350
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/358 (58%), Positives = 261/358 (72%), Gaps = 23/358 (6%)
Query: 1 MAITGVRTPPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISL-P 59
MAI + PQ+HRFPQ KY+D VRWLPPLS S+ AV+A++D+D+DS S+E HS++ P
Sbjct: 1 MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
Query: 60 ASLTPHSQWTPPTRISSLSTSH---QSLVAASTLSGSLHVLS-----SAMQVLLSVDENS 111
+ PHS W P+R+SSL TS LV AST +GSLHVLS +++ LSV E
Sbjct: 61 LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
Query: 112 GFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGG-EFKRVYDGNGLVGFNCVKWASP 168
H GPIS VD+ G EC++V EDGRV+LVSV G ++R++D NGLV +N VKWASP
Sbjct: 121 -LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASP 179
Query: 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228
TEFVTGG G+ LQWWD R+ G G V QFK N+ ASG++H +DIHPSRKHTCLAGG
Sbjct: 180 TEFVTGGCGFSLQWWDQRKPG--GAVSQFKANW-----ASGIVHCIDIHPSRKHTCLAGG 232
Query: 229 SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNI---SSSRVL 285
S GTVFAWDLR QQQ I+LSG+ + S ESEVWEV YD + KS N+ SS+++L
Sbjct: 233 SFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQIL 292
Query: 286 PAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP 343
PAM CSEDGIL +EQG+EP ELLAEPCAIN FDI+ Q+PS+VIC+LEWES+AI+SRP
Sbjct: 293 PAMICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 350
>gi|356498785|ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
Length = 346
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/342 (59%), Positives = 248/342 (72%), Gaps = 15/342 (4%)
Query: 12 VHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISL-PASLTPHSQWTP 70
+ RFPQ +Y+DAVRWLP S + AVLA++D D+D+ S+E H+++ P SL PHS W+
Sbjct: 8 IQRFPQHRYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHALNQNPFSLEPHSSWSS 67
Query: 71 PTRISSLSTSH---QSLVAASTLSGSLHVLSSAMQVLLSVDENS----GFHVGPISGVDL 123
P+R+SSL SH + L+ AST SGSLH L S + E S H P S VDL
Sbjct: 68 PSRVSSLKPSHFLQKPLIVASTSSGSLHFLFSDSSDASLLSEVSLPEGALHSLPASCVDL 127
Query: 124 T--GSECVSVGEDGRVNLVSVIGGG-EFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGL 180
G ECVSVGEDG+VNLV + ++R++D GLV + V+WASP EF TGGFG+GL
Sbjct: 128 MDGGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASPMEFATGGFGFGL 187
Query: 181 QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240
QWWD R+ G GPV QFKGN+ + SG++HS+DIHPSRKHTCLAGGS GTVFAWDLRW
Sbjct: 188 QWWDQRKPG--GPVSQFKGNWDKK-LTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRW 244
Query: 241 QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVE 300
QQQ I+LSG G S+SESEVWEVQYD K SN SS+R+LP+M CSEDGIL V+E
Sbjct: 245 QQQPIILSGAGAANTAVQSISESEVWEVQYDRCIK-SNTSSTRILPSMICSEDGILGVIE 303
Query: 301 QGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
QGEEP ELLAEPCAINSFDID NPSDVICSLEWE++AI++R
Sbjct: 304 QGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 345
>gi|356562545|ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
Length = 347
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 205/345 (59%), Positives = 246/345 (71%), Gaps = 18/345 (5%)
Query: 12 VHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSIS-LPASLTPHSQWTP 70
+ RFPQ KY+DAVRWLP S + AVLA++D D+D+ S+E HS++ P SL PHS W+
Sbjct: 6 IQRFPQHKYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHSLNPNPLSLEPHSSWSS 65
Query: 71 PTRISSLSTSH---QSLVAASTLSGSLHVLSSAMQVLLSVDENS----GFHVGPISGVDL 123
P+R+SSL SH + L+ AST SGSLH L S V E S H P S VDL
Sbjct: 66 PSRVSSLKASHFLQKPLIVASTSSGSLHFLFSDSSVATLESEVSIPEGALHSVPASCVDL 125
Query: 124 T--GSECVSVGEDGRVNLVSVIGGG-EFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGL 180
G ECV+VGEDG+VNLV + ++R++D GLV + V WASP EF TGG+G+GL
Sbjct: 126 LDGGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPMEFATGGYGFGL 185
Query: 181 QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240
WWD R+ G GPV QFKGN+ + SG++HS+DIHPSRKHTCLAGGS GTVFAWDLRW
Sbjct: 186 HWWDQRKPG--GPVSQFKGNWDKK-LTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRW 242
Query: 241 QQQSIVLSGVGTG---EAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILA 297
QQQ I+LSG G G S+SESEVWEVQYD K N SS+R+LP+M CSEDGIL
Sbjct: 243 QQQPIILSGAGAGAGGNTAVQSISESEVWEVQYDRCIKP-NTSSTRILPSMICSEDGILG 301
Query: 298 VVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
V+EQGEEP ELLAEPCAINSFDID NPSDVICSLEWE++AI++R
Sbjct: 302 VIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 346
>gi|357479953|ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula]
gi|355511317|gb|AES92459.1| Nucleoporin Nup43 [Medicago truncatula]
Length = 351
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 249/358 (69%), Gaps = 24/358 (6%)
Query: 1 MAITGVRTPPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSIS-LP 59
MA+T ++HRFPQ KYIDAVRWLP LS ++ AVLA D D++ S+E HS P
Sbjct: 1 MAVTA---NSEIHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPNP 57
Query: 60 ASLTPHSQWTPPTRISSLSTSH---QSLVAASTLSGSLHVL-----SSAMQVLLSVDENS 111
S S WT P+ ISS+ +S +S++A+ST SGSLH L + + +SV EN
Sbjct: 58 LSFEFQSSWTSPSPISSIKSSQFLQKSIIASSTSSGSLHFLFADSTDARLVSEVSVPENE 117
Query: 112 GFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGG-EFKRVYDGNGLVGFNCVKWASP 168
H+ +DL G ECV+VG+DGR+NLV+V ++R++D GLV + VKWASP
Sbjct: 118 -LHLEGKCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASP 176
Query: 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228
EF TGG+G+GL WWD R+ G GPV QFKGN+ + SG++HS+DIHPSRKHTCLA G
Sbjct: 177 VEFATGGYGFGLHWWDQRKPG--GPVSQFKGNW-DKNLNSGIVHSIDIHPSRKHTCLAAG 233
Query: 229 SSGTVFAWDLRWQQQSIVLSGVGTGE----AVTHSLSESEVWEVQYDCHTKSSNISSSRV 284
S GTV AWDLR QQQ I+LSG G G+ S+SESEVWEVQYD KS N SS+R+
Sbjct: 234 SLGTVLAWDLRMQQQPIILSGTGAGDGAGNTAVQSISESEVWEVQYDRCIKS-NTSSTRI 292
Query: 285 LPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
LPAM CSEDGIL V+EQGEEP ELLAEPCAINSFDID NP DVICSLEWES+AI++R
Sbjct: 293 LPAMICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPLDVICSLEWESVAILTR 350
>gi|2980782|emb|CAA18209.1| hypothetical protein [Arabidopsis thaliana]
gi|7269985|emb|CAB79802.1| hypothetical protein [Arabidopsis thaliana]
Length = 384
Score = 357 bits (916), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/370 (53%), Positives = 238/370 (64%), Gaps = 61/370 (16%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPH----- 65
QVHR PQSKY+D VRWLP S L++ A YD D DS S+E S+ P H
Sbjct: 9 QVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLD-PNPRGNHNTNPL 67
Query: 66 ----SQWTPPTRISSLST--------SHQSLVAASTLSGSLHVL------SSAMQVLLSV 107
S WT P+R+SSL S + +V+A+T SGSLHVL +A++ +
Sbjct: 68 IESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEFYAA 127
Query: 108 DENSGFHVGPISGVD-LTGSECVSVGEDGRVNLVSVIGGG--EFKRVYDGNGLVGFNCVK 164
E FHVG + GVD G ECV+VGEDGRVN+V ++ G +++V+DGNGLV + VK
Sbjct: 128 -EGERFHVGRVEGVDWREGGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYRAVK 186
Query: 165 WASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTC 224
WASPTEFVTGG+G+GLQ WD R++G V Q KGN+ QGK S ++HS+DIHPSRKHTC
Sbjct: 187 WASPTEFVTGGYGFGLQLWDQRKSGEA--VSQLKGNW-FQGKTSAIVHSIDIHPSRKHTC 243
Query: 225 L-----------------------------AGGSSGTVFAWDLRWQQQSIVLSGVGTGEA 255
+ GGSSGTVFAWDLRW QQ IVLSGVG E
Sbjct: 244 IFEKRLSHQLMNMIIPSVILNLYQVFGYIAFGGSSGTVFAWDLRWPQQPIVLSGVGASEN 303
Query: 256 VTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAEPCAI 315
+ + LSESEVWEVQYD +TK SN+SSSR+LP M CSEDGIL ++EQGEEP ELLAEPCAI
Sbjct: 304 INNPLSESEVWEVQYDSYTK-SNVSSSRILPVMTCSEDGILGIIEQGEEPIELLAEPCAI 362
Query: 316 NSFDIDPQNP 325
NSFDID QNP
Sbjct: 363 NSFDIDRQNP 372
>gi|357145394|ref|XP_003573628.1| PREDICTED: uncharacterized protein LOC100834630 [Brachypodium
distachyon]
Length = 343
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/340 (53%), Positives = 233/340 (68%), Gaps = 16/340 (4%)
Query: 10 PQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWT 69
P R P ID VRWLP + +L A++D S + H + LP +P +
Sbjct: 5 PSFRRHPLPFSIDLVRWLPSSTSSGRLLAAAVHDLS----SSQLHLLPLPDPASPLASLP 60
Query: 70 PPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQV--LLSVDENSGFHVGPISGVDLTGSE 127
P+R ++L S S++AA+T SGSLH+L S+ +SV +GFHVGP+ G+D G E
Sbjct: 61 LPSRATALRCS-PSVLAAATSSGSLHLLPSSFDAGSAISVPSGAGFHVGPVRGLDCGGEE 119
Query: 128 CVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDL 185
V+ GEDGRV++VS G G KRV+DG G+ G+ +WAS EF TGG G G+QWWD
Sbjct: 120 WVTAGEDGRVHVVSGGGDGRVVAKRVWDGKGMSGYEAARWASSAEFATGGAGCGVQWWDR 179
Query: 186 RRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSI 245
R+ + V Q KG +G +G A+GM+HS+DIHPSRKH C+ GGSSGT+FAWDLRWQQQ I
Sbjct: 180 RKGDA--VVAQCKGIWG-RGIATGMVHSIDIHPSRKHICVVGGSSGTIFAWDLRWQQQPI 236
Query: 246 VLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNI---SSSRVLPAMFCSEDGILAVVEQG 302
LSGVG + S+ ESEVWEV +D +T+SS+I +S+R+LP M CSEDGILA+VEQ
Sbjct: 237 PLSGVGL-DGTAQSVCESEVWEVLFDNYTQSSDIISSASTRMLPVMMCSEDGILAIVEQD 295
Query: 303 EEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
E P ELLAEPCAINSFDIDPQNPSDV+C+LEWESI +++R
Sbjct: 296 ERPLELLAEPCAINSFDIDPQNPSDVVCALEWESIGVLTR 335
>gi|226532798|ref|NP_001142067.1| uncharacterized protein LOC100274224 [Zea mays]
gi|194706980|gb|ACF87574.1| unknown [Zea mays]
gi|413922063|gb|AFW61995.1| hypothetical protein ZEAMMB73_270499 [Zea mays]
Length = 349
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/342 (49%), Positives = 227/342 (66%), Gaps = 14/342 (4%)
Query: 10 PQVHRFPQSKYIDAVRWLPP--LSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ 67
P R+P + +D VRWLP +SP +L A++D + S + + L ++ +
Sbjct: 5 PSFRRYPLASSVDLVRWLPSSSISPSGRLLAAAVHDPTSGSFASSIRLLPLSDPVSRLAS 64
Query: 68 WTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQ--VLLSVDENSGFHVGPISGVDLTG 125
P+R ++L S+ +L AA+T SGSLH + S+ +SV +GFHVGP+ G+D G
Sbjct: 65 VPLPSRATALRCSNAAL-AAATSSGSLHFVPSSFDSDAAVSVPGGAGFHVGPVRGLDCGG 123
Query: 126 SECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWW 183
E V+ GEDGRV++V + G +RV+DG G+ G+ +WASP EF TGG G G+QWW
Sbjct: 124 EEWVTAGEDGRVHVVGGVADGRVVTRRVWDGKGMSGYEAARWASPVEFATGGAGCGVQWW 183
Query: 184 DLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ 243
D R+ + V Q G +G +G +GM+HS+DIHPSRKH C+ GGSSGTVFAWDLR Q+
Sbjct: 184 DRRKGDA--IVAQCNGIWG-RGIVTGMVHSIDIHPSRKHICVVGGSSGTVFAWDLRQPQE 240
Query: 244 SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSS---RVLPAMFCSEDGILAVVE 300
I +S +G E + ESEVWEV +D +TKSS+I SS R+LP M CSEDGILAVVE
Sbjct: 241 PIPISVLGLNE-TAEPVCESEVWEVLFDTYTKSSDIISSASARILPVMMCSEDGILAVVE 299
Query: 301 QGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
Q + P ELLAE CAINSFDIDPQNPSDV+C+LEWES+ +++R
Sbjct: 300 QDKRPLELLAESCAINSFDIDPQNPSDVVCALEWESVGVLTR 341
>gi|242078747|ref|XP_002444142.1| hypothetical protein SORBIDRAFT_07g009510 [Sorghum bicolor]
gi|241940492|gb|EES13637.1| hypothetical protein SORBIDRAFT_07g009510 [Sorghum bicolor]
Length = 348
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/342 (50%), Positives = 219/342 (64%), Gaps = 14/342 (4%)
Query: 10 PQVHRFPQSKYIDAVRWLPP--LSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ 67
P R P + ID VRWLP SP +L A +D + + H + L +P +
Sbjct: 5 PSFRRHPLASSIDLVRWLPSSSTSPSGRLLAAAAHDPTSAPAASSIHLLPLSDPGSPLAS 64
Query: 68 WTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQ--VLLSVDENSGFHVGPISGVDLTG 125
P+R ++L S +L AA++ SLH L S+ +SV +GFHVGP+ G+D G
Sbjct: 65 LPLPSRATALRCSTAALAAATSSG-SLHFLPSSFDSDAAVSVPGGAGFHVGPVRGLDCGG 123
Query: 126 SECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWW 183
E V+ GEDGRV++V G +RV+DG G+ G+ +WASP EF TGG G G+QWW
Sbjct: 124 EEWVTAGEDGRVHVVGGAADGRVVARRVWDGKGMSGYEAARWASPVEFATGGAGCGVQWW 183
Query: 184 DLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ 243
D R+ + V Q G +G G +GM+HS+DIHPSRKH C+ GGSSGT+FAWDLRW QQ
Sbjct: 184 DRRKGDA--VVAQCNGIWG-HGIVTGMVHSIDIHPSRKHICVVGGSSGTIFAWDLRWPQQ 240
Query: 244 SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSS---RVLPAMFCSEDGILAVVE 300
I LSGVG + ESEVWEV +D T+SS+I SS R+LP M CSEDGILAVVE
Sbjct: 241 PIPLSGVGLNR-TAEPVCESEVWEVLFDTCTQSSDIISSASARILPVMMCSEDGILAVVE 299
Query: 301 QGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
Q E P ELLAE CAINSFDIDPQNPSDV+C+LEWESI +++R
Sbjct: 300 QDERPLELLAEACAINSFDIDPQNPSDVVCALEWESIGVLTR 341
>gi|147802800|emb|CAN66178.1| hypothetical protein VITISV_017836 [Vitis vinifera]
Length = 405
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 195/412 (47%), Positives = 241/412 (58%), Gaps = 76/412 (18%)
Query: 1 MAITGVRTPP----QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSI 56
MA T + PP Q+HR PQS+YIDAVR+LP S L + AVLA++DT + SPSL+ H
Sbjct: 1 MATT--KAPPSHSLQIHRLPQSQYIDAVRFLPAFSGLDRXAVLALFDTHSSSPSLQIH-- 56
Query: 57 SLPASLTP-------HSQWTPPTRISSLSTSHQSLVAASTLSGSLHVL----SSAMQVLL 105
SLP S P S + + +S ++H+ L+AAST SGSLH+L +++Q
Sbjct: 57 SLPKSTPPSLNLQSSLSLSSRVSSLSLSLSAHKPLLAASTFSGSLHILLLDFDTSVQSEF 116
Query: 106 SVDENSGFHVGPISGVDL--TGSECVSVGEDGRVN--LVSVIGGGEFKR-----VYDGNG 156
SV E + HVG IS VDL +G ECV + G ++ G +R V+
Sbjct: 117 SVPEKA-LHVGAISCVDLQESGVECVIIEGFGIAMGWFLTRRPSGRLQRSLLRGVWVWAS 175
Query: 157 LVGFNCVKWASPTEFVTGG------------FGYGLQWWDLRRAGSGGPVL------QFK 198
+VG W P V G Y L+ + + P+L Q +
Sbjct: 176 VVGSEETWW--PGFAVQGAPDNLGGASAFCEVIYKLEVSEENHCTNKKPLLVLLTISQLE 233
Query: 199 GNFGSQGKAS------------------------GMIHSVDIHPSRKHTCLAGGSSGTVF 234
+ G Q + G++HS+DIHPSRKHTCLAGGS GTVF
Sbjct: 234 ASLGMQKRNKDEILPYLIALRLGKXPFGLKEQHLGLLHSIDIHPSRKHTCLAGGSLGTVF 293
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSS---NISSSRVLPAMFCS 291
AWDLRWQQQ I+LSGVGT E THS ESEVWEV+YD + ++S N+SSSR+LPAM CS
Sbjct: 294 AWDLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPAMLCS 353
Query: 292 EDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP 343
EDGILAVVEQGEEP ELLAEPCAINSFDID QNP DVICSLEWESIAI+SRP
Sbjct: 354 EDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPXDVICSLEWESIAILSRP 405
>gi|115475617|ref|NP_001061405.1| Os08g0266600 [Oryza sativa Japonica Group]
gi|37806397|dbj|BAC99935.1| putative Nucleoporin Nup43 [Oryza sativa Japonica Group]
gi|113623374|dbj|BAF23319.1| Os08g0266600 [Oryza sativa Japonica Group]
Length = 354
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/348 (50%), Positives = 229/348 (65%), Gaps = 19/348 (5%)
Query: 9 PPQVHRFPQSKYIDAVRWLP--PLSPLSKLAVLAIYDTDADSPSLETHSISLPASLT-PH 65
PP R P ID +RWLP S +L A++D A S S + + P
Sbjct: 4 PPSFRRHPHPFSIDLIRWLPCSSSSSSDRLLAAAVHDPAAPSSSSSHLHLLPLHDPSSPL 63
Query: 66 SQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVL----LSVDENSGFHVGPISGV 121
+ P+R +SL S S++AA+T SGSLH+L S++ +SV +GFHVGP+ G+
Sbjct: 64 AALPLPSRAASLRCS-PSVLAAATSSGSLHLLPSSLDAAGSAGVSVPAGAGFHVGPVRGL 122
Query: 122 DLTG--SECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEFVTGGFG 177
D G E V+ GEDGRV++V G G +R++DG G+ G+ +WAS EF TGG G
Sbjct: 123 DCGGGGEEWVTAGEDGRVHVVGGGGDGRVVARRLWDGKGMAGYEAARWASAAEFATGGAG 182
Query: 178 YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
G+QWWD R+ + V Q KG +G +G +GM+HS+DIHPSRKH C+ GGSSGT+FAWD
Sbjct: 183 CGVQWWDRRKGDA--VVAQCKGVWG-RGIVTGMVHSIDIHPSRKHICVVGGSSGTIFAWD 239
Query: 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNI---SSSRVLPAMFCSEDG 294
LRW QQ I LSG+G +SESEVWEV +D +T+S++I +S+R+LP M CSEDG
Sbjct: 240 LRWPQQPIPLSGLGL-NGTAQPVSESEVWEVLFDNYTQSTDIISSASTRILPVMMCSEDG 298
Query: 295 ILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
ILAVVEQ E P ELLAEPCAINSFDIDP+NPSDV+C+LEWESI +++R
Sbjct: 299 ILAVVEQDERPLELLAEPCAINSFDIDPENPSDVVCALEWESIGVLTR 346
>gi|125602781|gb|EAZ42106.1| hypothetical protein OsJ_26668 [Oryza sativa Japonica Group]
Length = 354
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/348 (49%), Positives = 225/348 (64%), Gaps = 19/348 (5%)
Query: 9 PPQVHRFPQSKYIDAVRWLP--PLSPLSKLAVLAIYDTDADSPSLETHSISLPASLT-PH 65
PP R P ID +RWLP S +L A++D A S S + + P
Sbjct: 4 PPSFRRHPHPFSIDLIRWLPCSSSSSSDRLLAAAVHDPAAPSSSSSHLHLLPLHDPSSPL 63
Query: 66 SQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVL----LSVDENSGFHVGPISGV 121
+ P R +S S S++A +T SG LH++ S++ +SV +GFHVGP+ G+
Sbjct: 64 AALPLPFRAASFGPS-PSVLAGATSSGPLHLVPSSLDAAGSAGVSVPAGAGFHVGPVRGL 122
Query: 122 DLTG--SECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEFVTGGFG 177
D G E V+ GEDGRV++V G G +R++DG G+ G+ +WAS EF TGG G
Sbjct: 123 DCGGGGEEWVTAGEDGRVHVVGGGGDGRVVARRLWDGKGMAGYEAARWASAAEFATGGAG 182
Query: 178 YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
G+QWWD R+ + V Q KG +G +G +GM+HS+DIHPSRKH C+ GGSSGT+FAWD
Sbjct: 183 CGVQWWDRRKGDA--VVAQCKGVWG-RGIVTGMVHSIDIHPSRKHICVVGGSSGTIFAWD 239
Query: 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNI---SSSRVLPAMFCSEDG 294
LRW QQ I LSG+G +SESEVWEV +D +T+S++I +S+R+LP M CSEDG
Sbjct: 240 LRWPQQPIPLSGLGL-NGTAQPVSESEVWEVLFDNYTQSTDIISSASTRILPVMMCSEDG 298
Query: 295 ILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
ILAVVEQ E P ELLAEPCAINSFDIDP+NPSDV+C+LEWESI +++R
Sbjct: 299 ILAVVEQDERPLELLAEPCAINSFDIDPENPSDVVCALEWESIGVLTR 346
>gi|195656557|gb|ACG47746.1| hypothetical protein [Zea mays]
Length = 334
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/326 (49%), Positives = 212/326 (65%), Gaps = 14/326 (4%)
Query: 10 PQVHRFPQSKYIDAVRWLPP--LSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ 67
P R+P + +D VRWLP +SP +L A++D + S + + L ++ +
Sbjct: 5 PSFRRYPLASSVDLVRWLPSSSISPSGRLLAAAVHDPTSGSFASSIRLLPLSDPVSRLAS 64
Query: 68 WTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQ--VLLSVDENSGFHVGPISGVDLTG 125
P+R ++L SH +L AA+T SGSLH + S+ +SV +GFHVGP+ G+D G
Sbjct: 65 VPLPSRATALRCSHAAL-AAATSSGSLHFVPSSFDSDAAVSVPGGAGFHVGPVRGLDCGG 123
Query: 126 SECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWW 183
E V+ GEDGRV++V + G +R++DG G+ G+ +WASP EF TGG G G+QWW
Sbjct: 124 EEWVTAGEDGRVHVVGGVADGRVVTRRMWDGKGMSGYEAARWASPVEFATGGAGCGVQWW 183
Query: 184 DLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ 243
D R+ + V Q G +G +G +GM+HS+DIHPSRKH C+ GGSSGTVFAWDLR Q+
Sbjct: 184 DRRKGDA--IVAQCNGIWG-RGIVTGMVHSIDIHPSRKHICVVGGSSGTVFAWDLRQPQE 240
Query: 244 SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSS---RVLPAMFCSEDGILAVVE 300
I +S +G E + ESEVWEV +D +TKSS+I SS R+LP M CSEDGILAVVE
Sbjct: 241 LIPISVLGLNE-TAEPVCESEVWEVLFDTYTKSSDIISSASARILPVMMCSEDGILAVVE 299
Query: 301 QGEEPFELLAEPCAINSFDIDPQNPS 326
Q + P ELLAE CAINSFDIDPQNPS
Sbjct: 300 QDKRPLELLAESCAINSFDIDPQNPS 325
>gi|302753284|ref|XP_002960066.1| hypothetical protein SELMODRAFT_74209 [Selaginella moellendorffii]
gi|300171005|gb|EFJ37605.1| hypothetical protein SELMODRAFT_74209 [Selaginella moellendorffii]
Length = 351
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 215/353 (60%), Gaps = 32/353 (9%)
Query: 14 RFPQSKYIDAVRWLPP-LSPLSKLAVLAIYDTDADSPSLETHSISLPAS------LTPHS 66
R PQ + +D+VRWLP + ++ V ++D + PSLE +++ S L
Sbjct: 5 RLPQGRAVDSVRWLPSSAAAWDRMLVSTLFDPETGKPSLELNALGSKDSTEGRPWLDLRG 64
Query: 67 QWTPPTRISSLSTS----HQSLVAASTLSGSLHVLS-SAMQVLLS--VDEN----SGFHV 115
+W P R+S+L+T+ L A ++ GS+ V+ A+QV S +D+ SG H
Sbjct: 65 EWELPGRVSALATAALQGENFLAVAGSIEGSVTVVPVDAVQVTTSELLDKEPLVLSGLHE 124
Query: 116 GPISGVDLTGS--ECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEF 171
+ VD+ +C++VGEDG++++V I E KRV+D +G V F+ WAS EF
Sbjct: 125 ASVCAVDVLDDSGDCLAVGEDGKISVVK-ISESELLPKRVHDSHGHVSFSAAHWASSMEF 183
Query: 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG 231
VT G G LQWWDLR+ G G V Q + + G + G +HS+D+HPSRKH C+ GGS G
Sbjct: 184 VTAGVGAPLQWWDLRKPG--GAVSQCRLKW--DGSSPGFVHSLDVHPSRKHLCVVGGSGG 239
Query: 232 TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYD-CHTKSSNISSSRVLPAMFC 290
++FAWDLRWQ+ ++ L+GV ++ ++ ESEVWEV+YD T SS+ S +V P MFC
Sbjct: 240 SIFAWDLRWQRDAVKLAGVSASKS---AIVESEVWEVKYDHASTISSSSDSGKVPPVMFC 296
Query: 291 SEDGILAVVEQGEEPF-ELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
SEDG+LA +E G+ ELLAEPCAINSFD+D +N D++C LE ESI + R
Sbjct: 297 SEDGVLATIEGGKRNVTELLAEPCAINSFDVDCENGKDIVCGLEHESILFLKR 349
>gi|302804644|ref|XP_002984074.1| hypothetical protein SELMODRAFT_119189 [Selaginella moellendorffii]
gi|300148426|gb|EFJ15086.1| hypothetical protein SELMODRAFT_119189 [Selaginella moellendorffii]
Length = 351
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 215/353 (60%), Gaps = 32/353 (9%)
Query: 14 RFPQSKYIDAVRWLPP-LSPLSKLAVLAIYDTDADSPSLETHSISLPAS------LTPHS 66
R PQ + + +VRWLP + ++ V ++D + PSLE +++ S L
Sbjct: 5 RLPQGRAVGSVRWLPSSAAAWDRMLVSTLFDPETGKPSLELNALGSKDSTEGRPWLDLRG 64
Query: 67 QWTPPTRISSLSTS----HQSLVAASTLSGSLHVLS-SAMQVLLS--VDEN----SGFHV 115
+W P R+S+L+T+ L A ++ GS+ V+ A+QV S +D+ SG H
Sbjct: 65 EWELPGRVSALATAALQGENFLAVAGSIEGSVTVVPVDAVQVTTSELLDKEPLVLSGLHE 124
Query: 116 GPISGVDLTGS--ECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEF 171
+ VD+ +C++VGEDG++++V I E KRV+D +G + F+ WAS EF
Sbjct: 125 ASVCAVDVLDDSGDCLAVGEDGKISVVK-ISESELLPKRVHDSHGHISFSAAHWASSMEF 183
Query: 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG 231
VT G G LQWWDLR+ G GPV Q + + G + G +HS+D+HPSRKH C+ GGS G
Sbjct: 184 VTAGVGAPLQWWDLRKPG--GPVSQCRLKW--DGSSPGFVHSLDVHPSRKHLCVVGGSGG 239
Query: 232 TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYD-CHTKSSNISSSRVLPAMFC 290
++FAWDLRWQ+ ++ L+GV ++ ++ ESEVWEV+YD T SS+ S +V P MFC
Sbjct: 240 SIFAWDLRWQRDAVKLAGVSASKS---AIVESEVWEVKYDHASTISSSSDSGKVPPVMFC 296
Query: 291 SEDGILAVVEQGEEPF-ELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342
SEDG+LA +E G+ ELLAEPCAINSFD+D +N D++C LE ESI + R
Sbjct: 297 SEDGVLATIEGGKRNVTELLAEPCAINSFDVDCENGKDIVCGLEHESILFLKR 349
>gi|168034421|ref|XP_001769711.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679060|gb|EDQ65512.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 362
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 191/346 (55%), Gaps = 29/346 (8%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPAS------LTP 64
+VHR PQ +Y+D +RWLP S L+ L+++D D +LE + P +
Sbjct: 2 EVHRIPQGQYVDGLRWLPIPSTLA----LSLWDADTGLSTLEIAFLQDPEQEGQAPWMET 57
Query: 65 HSQWTPPTRISSL-STSHQSLVAASTLS--GSLHV-LSSAMQVLLS----VDENSGFHVG 116
+ W TR S++ S+S+QS +A + S GSL V L AM L V E H
Sbjct: 58 QASWDLSTRTSAMKSSSNQSNIALALASETGSLQVFLIDAMNPSLDSAPLVLER--LHKN 115
Query: 117 PISGVDLTGS--ECVSVGEDGRVNLVSVIGGG-EFKRVYDGNGLVGFNCVKWASPTEFVT 173
S +D+ +CV+VG DGR+NLV G + ++D G++ ++ V WASPTEFV
Sbjct: 116 VPSALDIQKDTLQCVTVGSDGRINLVQARQSGLQGDCLHDNRGVLSYSTVCWASPTEFVL 175
Query: 174 GGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKAS----GMIHSVDIHPSRKHTCLAGGS 229
G G G+QWWD RR G KG + + G IH+VD+H SRKH + GGS
Sbjct: 176 AGHGAGIQWWDNRRPGGAVAQSPAKGELTGRNRVGADGVGSIHTVDVHQSRKHLSVVGGS 235
Query: 230 SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMF 289
GTV AWDLR Q + L+G G ++ + + +E E+W V+ D + S ++ P +
Sbjct: 236 GGTVLAWDLRRQNELHSLAGRGC-KSGSSTGAEGEIWNVKLDPALQVGQGESGKIPPVLM 294
Query: 290 CSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWE 335
CSEDGILA++E G EL E CAINSFD+D + S+++C+LE E
Sbjct: 295 CSEDGILALIESG-MTTELAVESCAINSFDVDLELGSEIVCALEHE 339
>gi|147867373|emb|CAN79000.1| hypothetical protein VITISV_037561 [Vitis vinifera]
Length = 266
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/256 (48%), Positives = 156/256 (60%), Gaps = 44/256 (17%)
Query: 1 MAITGVRTPP----QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSI 56
MA T + PP Q+HR PQS+YIDAVR+LP S L + AVLA++DT + SPSL+ HS+
Sbjct: 1 MATT--KAPPSHSLQIHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHSL 58
Query: 57 --SLPASLTPHSQWTPPTRISSLST-------------------------SHQSLVAAST 89
S P SL S + +R+SSLS +H+ L+AAST
Sbjct: 59 PKSTPPSLNLQSSLSLSSRVSSLSLSLSSRVSSLSLSLSSRVSSLSLSLSAHKPLIAAST 118
Query: 90 LSGSLHVL----SSAMQVLLSVDENSGFHVGPISGVDL--TGSECVSVGEDGRVNLVSVI 143
SGSLH+L +++Q SV E S HVG IS VDL +G ECVSVGEDGRVNLV+
Sbjct: 119 FSGSLHILLLDFDASVQSEFSVPEKS-LHVGAISCVDLQESGVECVSVGEDGRVNLVAFG 177
Query: 144 GGGE--FKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNF 201
G ++RV+D +GLV + KWASPTEF TGGFG+GLQWWDLR+ GGPV QFKGN+
Sbjct: 178 DGSRLSYRRVWDSDGLVSYTAAKWASPTEFATGGFGFGLQWWDLRKP--GGPVSQFKGNW 235
Query: 202 GSQGKASGMIHSVDIH 217
+ + IH IH
Sbjct: 236 VYREHKAFGIHKTPIH 251
>gi|219888921|gb|ACL54835.1| unknown [Zea mays]
gi|413922065|gb|AFW61997.1| hypothetical protein ZEAMMB73_270499 [Zea mays]
Length = 143
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/136 (66%), Positives = 108/136 (79%), Gaps = 4/136 (2%)
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQ 269
M+HS+DIHPSRKH C+ GGSSGTVFAWDLR Q+ I +S +G E + ESEVWEV
Sbjct: 1 MVHSIDIHPSRKHICVVGGSSGTVFAWDLRQPQEPIPISVLGLNET-AEPVCESEVWEVL 59
Query: 270 YDCHTKSSNISSS---RVLPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPS 326
+D +TKSS+I SS R+LP M CSEDGILAVVEQ + P ELLAE CAINSFDIDPQNPS
Sbjct: 60 FDTYTKSSDIISSASARILPVMMCSEDGILAVVEQDKRPLELLAESCAINSFDIDPQNPS 119
Query: 327 DVICSLEWESIAIVSR 342
DV+C+LEWES+ +++R
Sbjct: 120 DVVCALEWESVGVLTR 135
>gi|388514811|gb|AFK45467.1| unknown [Medicago truncatula]
Length = 243
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 135/216 (62%), Gaps = 18/216 (8%)
Query: 1 MAITGVRTPPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSIS-LP 59
MA+T ++HRFPQ KYIDAVRWLP LS ++ AVLA D D++ S+E HS P
Sbjct: 1 MAVTA---NSEIHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPNP 57
Query: 60 ASLTPHSQWTPPTRISSLSTSH---QSLVAASTLSGSLHVL-----SSAMQVLLSVDENS 111
S S WT P+ ISS+ +S +S++A+ST SGSLH L + + +SV EN
Sbjct: 58 LSFEFQSSWTSPSPISSIKSSQFLQKSIIASSTSSGSLHFLFADSTDARLVSEVSVPENE 117
Query: 112 GFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGG-EFKRVYDGNGLVGFNCVKWASP 168
H+ +DL G ECV+VG+DGR+NLV+V ++R++D GLV + VKWASP
Sbjct: 118 -LHLEGKCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASP 176
Query: 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQ 204
EF GG+G+GL WWD R+ GGPV QFKGN+ +
Sbjct: 177 VEFAAGGYGFGLHWWDQRKP--GGPVSQFKGNWDKK 210
>gi|217073994|gb|ACJ85357.1| unknown [Medicago truncatula]
Length = 205
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 130/211 (61%), Gaps = 18/211 (8%)
Query: 1 MAITGVRTPPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSIS-LP 59
MA+T ++HRFPQ KYIDAVRWLP LS ++ AVLA D D++ S+E HS P
Sbjct: 1 MAVTA---NSEIHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKPNP 57
Query: 60 ASLTPHSQWTPPTRISSLSTSH---QSLVAASTLSGSLHVL-----SSAMQVLLSVDENS 111
S S WT P+ ISS+ +S +S++A+ST SGSLH L + + +SV EN
Sbjct: 58 LSFEFQSSWTSPSPISSIKSSQFLQKSIIASSTSSGSLHFLFADSTDARLVSEVSVPENE 117
Query: 112 GFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGG-EFKRVYDGNGLVGFNCVKWASP 168
H+ +DL G ECV+VG+DGR+NLV+V ++R++D GLV + VKWASP
Sbjct: 118 -LHLEGKCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASP 176
Query: 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKG 199
EF GG+G+GL WWD R+ GGPV +G
Sbjct: 177 VEFAAGGYGFGLHWWDQRKP--GGPVFSVQG 205
>gi|116780737|gb|ABK21796.1| unknown [Picea sitchensis]
Length = 214
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 19/203 (9%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSIS-------LPASLT 63
+V RFPQ KY+DA+RWLPP++ +L A+YD D+ + S++ H+++ P L
Sbjct: 9 EVGRFPQGKYVDALRWLPPVAAFDRLVATALYDADSGTSSVQVHTLTPADAHFHYPPRLE 68
Query: 64 PHSQWTPPTRISSL---STSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGP--I 118
+ WT P RIS L S+S ++++AA++ +++ +QV L + G I
Sbjct: 69 LQTTWTSPARISKLKVASSSQKAIIAAASSGCLCFLVADPLQVSLEAEGCLGLGTSSSYI 128
Query: 119 SGVDLTGS----ECVSVGEDGRVNLVSVIGGGEFKR-VYDGNGLVGFNCVKWASPTEFVT 173
SG+DL S EC+ VGEDG++NLV + G V D GL+ + +WASPTEFVT
Sbjct: 129 SGMDLQASSSDCECICVGEDGKINLVKLAEGQMHHTCVTDNRGLISYTAARWASPTEFVT 188
Query: 174 GGFGYGLQWWDLRRAGSGGPVLQ 196
G G+ LQWWD R+ G+ PV Q
Sbjct: 189 AGLGFTLQWWDHRKPGA--PVSQ 209
>gi|413922064|gb|AFW61996.1| hypothetical protein ZEAMMB73_270499 [Zea mays]
Length = 223
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 7/184 (3%)
Query: 10 PQVHRFPQSKYIDAVRWLPP--LSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ 67
P R+P + +D VRWLP +SP +L A++D + S + + L ++ +
Sbjct: 5 PSFRRYPLASSVDLVRWLPSSSISPSGRLLAAAVHDPTSGSFASSIRLLPLSDPVSRLAS 64
Query: 68 WTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQ--VLLSVDENSGFHVGPISGVDLTG 125
P+R ++L S+ +L AA+T SGSLH + S+ +SV +GFHVGP+ G+D G
Sbjct: 65 VPLPSRATALRCSNAAL-AAATSSGSLHFVPSSFDSDAAVSVPGGAGFHVGPVRGLDCGG 123
Query: 126 SECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWW 183
E V+ GEDGRV++V + G +RV+DG G+ G+ +WASP EF TGG G G+QWW
Sbjct: 124 EEWVTAGEDGRVHVVGGVADGRVVTRRVWDGKGMSGYEAARWASPVEFATGGAGCGVQWW 183
Query: 184 DLRR 187
D R+
Sbjct: 184 DRRK 187
>gi|384252649|gb|EIE26125.1| hypothetical protein COCSUDRAFT_40276 [Coccomyxa subellipsoidea
C-169]
Length = 353
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 111/251 (44%), Gaps = 31/251 (12%)
Query: 113 FHVGPISGVDLTGS--ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTE 170
H G ++ +D+ E VS GEDG + +V + + + + V+WAS
Sbjct: 109 LHQGRVAALDICAETREVVSAGEDGALFVVPLESTSAPQPFVEPRDSASYRAVRWASQQT 168
Query: 171 FVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGM-------IHSVDIHPSRKHT 223
FV+ G GL+ WD RR G P L+ + A G+ I+ + HPSR H
Sbjct: 169 FVSAGTTGGLEVWDKRRPGR--PQLRALVRDATHKMARGVTQGLERQINCIAAHPSRPHL 226
Query: 224 CLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSR 283
C G S+GTV WDLR+ Q V V+ EVWEV +D + +
Sbjct: 227 CATGASAGTVAVWDLRFTAQPTV--------HVSPKPGSGEVWEVHFDGYEAFGGAAGGA 278
Query: 284 VLPAMFCSEDGILAVV-----------EQGEEPFELLAEPCA-INSFDIDPQNPSDVICS 331
+FC+ G+L V +Q + L EPC+ I SFD+D + D+ C+
Sbjct: 279 DPSVLFCTSGGVLGTVPSSSPSKASAADQLKPSAVLYEEPCSGIRSFDVDATSGQDLFCA 338
Query: 332 LEWESIAIVSR 342
+ E + +SR
Sbjct: 339 TDQECLVYLSR 349
>gi|302835818|ref|XP_002949470.1| hypothetical protein VOLCADRAFT_120749 [Volvox carteri f.
nagariensis]
gi|300265297|gb|EFJ49489.1| hypothetical protein VOLCADRAFT_120749 [Volvox carteri f.
nagariensis]
Length = 2575
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 47/214 (21%)
Query: 154 GNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG---- 209
G+G +G+ C +W + FVT GL+ WD+R PV + +G+ G
Sbjct: 240 GSGCLGYTCARWVDRSLFVTSRTVGGLETWDVR--CPPAPVSRTPQEWGATGLGPADRGC 297
Query: 210 --MIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWE 267
+IH++ +HPSR C GGS G+V WDLR + + L+ ++ VWE
Sbjct: 298 HRVIHALQVHPSRPDVCATGGSGGSVALWDLRAAARPLALT--------QPDIAAGPVWE 349
Query: 268 VQYDCH------TKSSNISSSRVLPAMFCSEDGILAVVE--------------------- 300
V++D ++S + + +FC+EDG L V
Sbjct: 350 VRFDTREGAQYGAEASGGQQAPLPSVLFCTEDGALCRVSASDAAAAAAATPHFGRMEELT 409
Query: 301 -QGEE---PFELLAEPCAINSFDIDPQNPSDVIC 330
QG P L P AINSFD+ +DV+
Sbjct: 410 WQGSRRGAPQILTELPAAINSFDLGGPFGTDVVA 443
>gi|328866437|gb|EGG14821.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
Length = 404
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 53/258 (20%)
Query: 114 HVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEF 171
H G ++ DL G SVG DG ++L S+ +GL N +K+ + E
Sbjct: 168 HKGSLNAFDLNLMGDAVASVGSDGAMHLFSLETRDLIYSNKHVDGLT-LNSIKFMTNNEV 226
Query: 172 VTGGFGYGLQWWDLRRAGSGGPVLQFK-----------GNFGSQGKASGMIHSVDIHPSR 220
+T G L++WDLR GP+ K ++ K S IHS+ +H +
Sbjct: 227 ITSGANAVLKFWDLRIKSDNGPIKTIKQQGQQQQMGIDNSYNIPNKVSS-IHSIAVHHDQ 285
Query: 221 KHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNIS 280
H G S G V +D R + + H +S VWEVQ+ S
Sbjct: 286 SHIIATGNSEGQVTLYDFR--------NSYAIDQNNNH---QSYVWEVQF---------S 325
Query: 281 SSRVLPAMFCSEDGILAVVEQGEE-----------------PFELLAEPCAINSFDIDPQ 323
+R CSEDG + + + E PF +I+SFDI+P
Sbjct: 326 KARSNQLYSCSEDGFVYLYDYNRENTMMTTNIFDLYNKAVTPFITTTTHSSIDSFDINPC 385
Query: 324 NPSDVICSLEWESIAIVS 341
+ + C+ +S+ + S
Sbjct: 386 TQT-MFCTTSTQSLLLKS 402
>gi|157130259|ref|XP_001661858.1| hypothetical protein AaeL_AAEL011719 [Aedes aegypti]
gi|108871952|gb|EAT36177.1| AAEL011719-PA [Aedes aegypti]
Length = 371
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 104 LLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCV 163
L D S + P +G+ + ++ +VGEDGR+N+VS +G + + + +CV
Sbjct: 119 LHKFDTFSSLNAAPCTGLSVHDTDVATVGEDGRLNVVSTVGLKVLRSITSADSCT-ISCV 177
Query: 164 KWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFG---SQGKASGMIHSVDIHPSR 220
+ +P E +TG ++ +D+R G G+F K S + + HP++
Sbjct: 178 AFLNPKEVLTGNRLGIIKCFDIRAEGQKAV-----GSFAVSCEDEKRSNCVTCITYHPTQ 232
Query: 221 KHTCLAGGSSGTVFAWDLRWQQ 242
+H LAG G++ WDLR Q
Sbjct: 233 RHIILAGSEEGSITVWDLRQPQ 254
>gi|157104926|ref|XP_001648635.1| hypothetical protein AaeL_AAEL014388 [Aedes aegypti]
gi|108869105|gb|EAT33330.1| AAEL014388-PA [Aedes aegypti]
Length = 371
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 104 LLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCV 163
L D S + P +G+ + ++ +VGEDGR+N+VS +G + + + +CV
Sbjct: 119 LHKFDTFSSLNAAPCTGLSVHDTDVATVGEDGRLNVVSTVGLKVLRSIASADSCT-ISCV 177
Query: 164 KWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFG---SQGKASGMIHSVDIHPSR 220
+ +P E +TG ++ +D+R G G+F K S + + HP++
Sbjct: 178 AFLNPKEVLTGNRLGIIKCFDIRAEGQKAV-----GSFAVSCEDEKRSNCVTCITYHPTQ 232
Query: 221 KHTCLAGGSSGTVFAWDLRWQQ 242
+H LAG G++ WDLR Q
Sbjct: 233 RHIILAGSEEGSITVWDLRQPQ 254
>gi|195443800|ref|XP_002069581.1| GK11598 [Drosophila willistoni]
gi|194165666|gb|EDW80567.1| GK11598 [Drosophila willistoni]
Length = 321
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + GS+ +VGEDG +N++S + KR D + + F V + + E VT
Sbjct: 130 APCTAIAAYGSDVATVGEDGVLNVLSANNLKQVKRSIDADSISLF-AVTYVNQHELVTAN 188
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
L+ +D R + P + F KAS + ++ +HP ++H + G GTV
Sbjct: 189 RMGVLRMFDTRLSSEAQPKIAFMA-ACEDDKASNFVSAITVHPMQQHILMCGSEEGTVTV 247
Query: 236 WDLR 239
WDLR
Sbjct: 248 WDLR 251
>gi|383866382|ref|XP_003708649.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15-like [Megachile rotundata]
Length = 1039
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 127 ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLR 186
+ VSVGEDGR+NL++ G R+ D CV + E +TG ++ WDLR
Sbjct: 132 DIVSVGEDGRINLLTA-GQETPVRIIDEADSCSIYCVDFLRHNEILTGNLRGHMKVWDLR 190
Query: 187 RAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
P F + ++ +A+ ++H HP+++H +AGG G++ WDLR
Sbjct: 191 N-DQDLPATTFMLSDQTKTEATSIVH----HPTQRHIVVAGGGDGSLTVWDLR 238
>gi|195395250|ref|XP_002056249.1| GJ10325 [Drosophila virilis]
gi|194142958|gb|EDW59361.1| GJ10325 [Drosophila virilis]
Length = 353
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + + G++ ++GEDGR+N++S + KR D + + V + S + VT
Sbjct: 125 APCTAIAVYGTDIATIGEDGRLNVLSANNLKQVKRAIDADSMTLL-AVSYVSQHQLVTAN 183
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ +D+R AG G P F K+S + ++ HP ++H + G G++
Sbjct: 184 RMGVIRMFDVRTAGDGQPKASFMAAC-QDTKSSNFVSAMATHPMQQHILICGSEEGSITV 242
Query: 236 WDLR 239
WDLR
Sbjct: 243 WDLR 246
>gi|126310689|ref|XP_001370946.1| PREDICTED: nucleoporin Nup43 [Monodelphis domestica]
Length = 380
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 104/257 (40%), Gaps = 53/257 (20%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGPIS---------GVDLTGSECV 129
+ +VAAS+ L LSV + + +H+GP S G+ E V
Sbjct: 86 ERIVAASSTGCVTVFLHHPNNQTLSVSQEWIGAHYHIGPCSPSYRSAPCTGIVCNSPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL V G E R D + V + E +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRV-GYKEAVRTIDNADSSTLHAVAFLRTPEILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R Q S+ +S
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGSMPVS 255
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL------------ 296
+ EA E+WEV H SN CSEDG L
Sbjct: 256 LLKAHEA--------EMWEV----HFHPSNPDH-----LFTCSEDGSLWHWDASTDVPEK 298
Query: 297 -AVVEQGEEPFELLAEP 312
++ QG LLA P
Sbjct: 299 SSLFHQGGRNSTLLAHP 315
>gi|357620205|gb|EHJ72485.1| putative nucleoporin Nup43 [Danaus plexippus]
Length = 341
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 40/288 (13%)
Query: 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSL-------ETHSISLPASLTPHSQWTP 70
S+ I+ VRW+P +K +D D +S + E + P L S++
Sbjct: 11 SQKINKVRWIPEDYMETKHFFTGSWDDDENSIKVWSFETANEDEDVEYPRQL---SEYKV 67
Query: 71 PTRISSLSTSHQSLVAASTLSGSLHVLS-SAMQVLLSVDE--------NSGFHVGPISGV 121
++ + ++++++A S +G + +L SA + E N G + +
Sbjct: 68 DGDVTEIKFTNKNVIAVSISNGDVKMLEISAYDKESPLKEVYTWNNLHNYGLEKCSCTSL 127
Query: 122 DLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQ 181
D + S+GEDG VN+++ G+ + G + V + E +TG ++
Sbjct: 128 DTLEGDIASIGEDGNVNILNG-RRGDISQTIKGADSCSLHSVCFIKLNEVITGNIRGHMK 186
Query: 182 WWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQ 241
WD+R + + P F G + A+ +IH HP++ H LAG SG + WDLR
Sbjct: 187 IWDIR-SSTNKPSAAFLL-AGDELAATCIIH----HPTQPHIVLAGSESGALALWDLRMN 240
Query: 242 Q-QSIVLSGVGTG------------EAVTHSLSESEVWEVQYDCHTKS 276
Q + +L+ G G + +T S+S E+WE D TK
Sbjct: 241 QFPTSLLNAHGGGVTEMQFHPENPNKLLTTSVS-GEIWEWNMDMLTKK 287
>gi|380024559|ref|XP_003696062.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15-like [Apis florea]
Length = 1039
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ + SVGEDGR+NL++ G + RV D C+ + E +TG
Sbjct: 121 APCTGLSTFEQDIASVGEDGRINLLTA-GQKQPVRVIDDADSCSLYCIDFLRHNEILTGN 179
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ WDLR P F + S+ +A+ + H HP+++H +AGG G++
Sbjct: 180 IRGHMKVWDLRN-DQDLPATTFMLSDQSKTEATSIAH----HPTQRHIVVAGGGDGSLTV 234
Query: 236 WDLR 239
WDLR
Sbjct: 235 WDLR 238
>gi|126341132|ref|XP_001365497.1| PREDICTED: nucleoporin Nup43-like [Monodelphis domestica]
Length = 380
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 105/257 (40%), Gaps = 53/257 (20%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGPIS---------GVDLTGSECV 129
+ +VAAS+ L LSV + + +H+GP S G+ E V
Sbjct: 86 ERIVAASSTGCVTVFLHHPNNQTLSVSQEWIGAHYHIGPCSPSYRSAPCTGIVCNSPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL V G E R D + V + +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRV-GYKEAVRTIDNADSSTLHAVAFLQTPGILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R Q S+ +S
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGSMPVS 255
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL------------ 296
+ EA E+WEV + HT + + CSEDG L
Sbjct: 256 LLKAHEA--------EMWEVHF--HTSNPD-------HLFTCSEDGSLWQWDASTDVPEK 298
Query: 297 -AVVEQGEEPFELLAEP 312
++ QG LLA P
Sbjct: 299 SSLFHQGGRNSTLLAHP 315
>gi|348561155|ref|XP_003466378.1| PREDICTED: nucleoporin Nup43-like isoform 2 [Cavia porcellus]
Length = 352
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 76/187 (40%), Gaps = 28/187 (14%)
Query: 111 SGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTE 170
S + P +G+ E V+VGEDGR+NL V E R D + V + E
Sbjct: 100 SAYRGAPCTGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPE 158
Query: 171 FVTGGFGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS 229
VT L+ WD R+ G+ +L G+ +H VD HP+++H GG
Sbjct: 159 IVTVNSIGQLKIWDFRQQGNEPAQILSLNGD-------RVPLHCVDRHPNQQHVVATGGQ 211
Query: 230 SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMF 289
G + WD+R GT E+E+WEV + S+
Sbjct: 212 DGMLSIWDVR----------QGTMPVSLLKAHEAEMWEVHF---------HPSKPDHLFT 252
Query: 290 CSEDGIL 296
CSEDG L
Sbjct: 253 CSEDGSL 259
>gi|348561153|ref|XP_003466377.1| PREDICTED: nucleoporin Nup43-like isoform 1 [Cavia porcellus]
Length = 378
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 76/187 (40%), Gaps = 28/187 (14%)
Query: 111 SGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTE 170
S + P +G+ E V+VGEDGR+NL V E R D + V + E
Sbjct: 126 SAYRGAPCTGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPE 184
Query: 171 FVTGGFGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS 229
VT L+ WD R+ G+ +L G+ +H VD HP+++H GG
Sbjct: 185 IVTVNSIGQLKIWDFRQQGNEPAQILSLNGD-------RVPLHCVDRHPNQQHVVATGGQ 237
Query: 230 SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMF 289
G + WD+R GT E+E+WEV + S+
Sbjct: 238 DGMLSIWDVR----------QGTMPVSLLKAHEAEMWEVHF---------HPSKPDHLFT 278
Query: 290 CSEDGIL 296
CSEDG L
Sbjct: 279 CSEDGSL 285
>gi|328780322|ref|XP_003249784.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15-like [Apis mellifera]
Length = 1039
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ + SVGEDGR+NL++ G + RV D C+ + E +TG
Sbjct: 121 APCTGLSTFEQDIASVGEDGRINLLTA-GQKQPVRVIDDADSCSLYCIDFLRHNEILTGN 179
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ WDLR P F + ++ +A+ + H HP+++H +AGG G++
Sbjct: 180 IRGHMKVWDLRN-DQDLPATTFMLSDQAKTEATSIAH----HPTQRHIVVAGGGDGSLTV 234
Query: 236 WDLR 239
WDLR
Sbjct: 235 WDLR 238
>gi|148224957|ref|NP_001090382.1| nucleoporin 43kDa [Xenopus laevis]
gi|116063410|gb|AAI23277.1| MGC154553 protein [Xenopus laevis]
Length = 375
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 31/193 (16%)
Query: 109 ENSGFHVG-----PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCV 163
E + +HVG P + + + E VSVGEDGR+N + + D + + V
Sbjct: 117 EQAHYHVGSNMRAPCTAIVCSSPEIVSVGEDGRINCFRAESRDVLRTIDDADSST-MHGV 175
Query: 164 KWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223
+ TE +T L+ WDLR+ G+ + F G+ + H VD HP+++H
Sbjct: 176 TFLRTTEILTVNSVGQLKLWDLRKQGNDPTQI-----FSVTGERVPL-HCVDRHPNQQHV 229
Query: 224 CLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSR 283
GG G + WD+R + + L E+E+WEV H SN
Sbjct: 230 VATGGQDGMLCIWDVRHGKMPMSLLNA----------HEAEMWEV----HFHPSNPDH-- 273
Query: 284 VLPAMFCSEDGIL 296
CSEDG L
Sbjct: 274 ---LFTCSEDGSL 283
>gi|195108809|ref|XP_001998985.1| GI23322 [Drosophila mojavensis]
gi|193915579|gb|EDW14446.1| GI23322 [Drosophila mojavensis]
Length = 353
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ + G++ +VGEDGR+N++S + KR + + + + + + VT
Sbjct: 125 APCTGISVYGTDIATVGEDGRLNVLSANNLRQVKRTIEADSM-SLLATSFVNQNQVVTAN 183
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ +D+R A G P + F K+S + ++ HP ++H + G G++
Sbjct: 184 RMGVIRLFDVRTASDGQPTISFMA-ASQDSKSSNFVSAMVTHPMQQHILICGSEEGSITV 242
Query: 236 WDLR 239
WD+R
Sbjct: 243 WDMR 246
>gi|344264623|ref|XP_003404391.1| PREDICTED: nucleoporin Nup43 [Loxodonta africana]
Length = 380
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVACNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTAN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG GT+
Sbjct: 191 SIGQLKIWDFRQPGNEPSHILSPTGD-------RVPLHCVDRHPNQQHVVATGGQDGTLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R +GT E+E+WEV + S CSEDG
Sbjct: 244 IWDVR----------LGTMPVSLLKAHEAEMWEVHF---------HPSNPDHLFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|351707524|gb|EHB10443.1| Nucleoporin Nup43 [Heterocephalus glaber]
Length = 380
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 73/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 132 APCTGIVCDNPEIVTVGEDGRINLFRV-DHKETVRTIDNADSSTLHAVTFLRTPEIVTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRLQGNEPAQILSLNGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV + S+ CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEVHF---------HPSKPDHLFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|156362131|ref|XP_001625634.1| predicted protein [Nematostella vectensis]
gi|156212477|gb|EDO33534.1| predicted protein [Nematostella vectensis]
Length = 376
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 35/219 (15%)
Query: 84 LVAASTLSGSLHVLSSAMQVLL--SVDENSGFHVG---PISGV--DLTGSECVSVGEDGR 136
+VA+S+ + SL+ ++ +V+ V E FH+ P + V T S+ ++ GEDGR
Sbjct: 94 VVASSSGNVSLYQYNTKRKVIYIEQVWERMHFHLDQSCPCTSVATSQTSSDIITAGEDGR 153
Query: 137 VNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLR-RAGSGGPVL 195
+N++ G R YD N + + + +E V F ++ WDLR R +
Sbjct: 154 LNVLKT-GNQNPIRFYDSADSTSINDITFTTTSEVVGVTFSGQVKMWDLRNRNNKPSRTM 212
Query: 196 QFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEA 255
G+ + VD HP++ H AGG G + WD+R +Q + L
Sbjct: 213 LLSGDRVP-------LLCVDKHPTQPHLLAAGGQDGVLSIWDMRQEQYPVTL-------L 258
Query: 256 VTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
HS +EVWEV++ H + ++ CSEDG
Sbjct: 259 EGHS---AEVWEVKF--HPQKAD-------HLFTCSEDG 285
>gi|62859271|ref|NP_001016144.1| nucleoporin 43kDa [Xenopus (Silurana) tropicalis]
gi|89268190|emb|CAJ81956.1| nucleoporin 43 [Xenopus (Silurana) tropicalis]
Length = 375
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 31/193 (16%)
Query: 109 ENSGFHVG-----PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCV 163
E + +HVG P +G+ + E VSVGEDGR+N + + D + + V
Sbjct: 117 EQAHYHVGSNMRAPCTGIVCSSPEIVSVGEDGRINCFRAESRDVVRTIDDADSST-MHGV 175
Query: 164 KWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223
+ TE +T L+ WDLR+ G+ + F G+ + H VD HP+++H
Sbjct: 176 TFLRTTEILTVNSVGQLKLWDLRKQGNDPTQI-----FSVTGERVPL-HCVDRHPNQQHV 229
Query: 224 CLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSR 283
GG G + WD+R + + L ++E+WEV + S
Sbjct: 230 VATGGQDGMLCIWDVRHGKMPMSLLNA----------HKAEMWEVHF---------HPSN 270
Query: 284 VLPAMFCSEDGIL 296
CSEDG L
Sbjct: 271 PDHLFTCSEDGSL 283
>gi|213627308|gb|AAI71085.1| nucleoporin 43kDa [Xenopus (Silurana) tropicalis]
Length = 375
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 31/193 (16%)
Query: 109 ENSGFHVG-----PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCV 163
E + +HVG P +G+ + E VSVGEDGR+N + + D + + V
Sbjct: 117 EQAHYHVGSNMRAPCTGIVCSSPEIVSVGEDGRINCFRAESRDVVRTIDDADSST-MHGV 175
Query: 164 KWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223
+ TE +T L+ WDLR+ G+ + F G+ + H VD HP+++H
Sbjct: 176 TFLRTTEILTVNSVGQLKLWDLRKQGNDPTQI-----FSVTGERVPL-HCVDRHPNQQHV 229
Query: 224 CLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSR 283
GG G + WD+R + + L ++E+WEV + S
Sbjct: 230 VATGGQDGMLCIWDVRHGKMPMSLLNA----------HKAEMWEVHF---------HPSN 270
Query: 284 VLPAMFCSEDGIL 296
CSEDG L
Sbjct: 271 PDHLFTCSEDGSL 283
>gi|395535118|ref|XP_003769579.1| PREDICTED: nucleoporin Nup43 [Sarcophilus harrisii]
Length = 380
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 103/257 (40%), Gaps = 53/257 (20%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV + + +H+GP +G+ E V
Sbjct: 86 ERIVAASSTGCVTIFLHHPNNQTLSVSQEWVGAHYHIGPGSPSYRSAPCTGIVCNSPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL V E R D + V + E +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRV-DYKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R Q S+ +S
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGSMPVS 255
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL------------ 296
+ EA E+WEV H SN CSEDG L
Sbjct: 256 LLKAHEA--------EMWEV----HFHPSNPDH-----LFTCSEDGSLWHWDASTEVPEK 298
Query: 297 -AVVEQGEEPFELLAEP 312
++ QG LLA P
Sbjct: 299 SSLFHQGGRNSTLLAHP 315
>gi|431904237|gb|ELK09634.1| Nucleoporin Nup43 [Pteropus alecto]
Length = 380
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV + E V+VGEDGR+NL V E R D + V + E +T
Sbjct: 132 APCTGVVCSSPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RMPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|119568175|gb|EAW47790.1| hCG21011, isoform CRA_b [Homo sapiens]
Length = 303
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV++ + +H GP +GV E V
Sbjct: 9 ERIVAASSTGCVTVFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEIV 68
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL E R D + V + E +T L+ WD R+ G
Sbjct: 69 TVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 127
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R Q ++ +S
Sbjct: 128 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGTMPVS 178
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+ EA E+WEV + S CSEDG L
Sbjct: 179 LLKAHEA--------EMWEVHF---------HPSNPEHLFTCSEDGSL 209
>gi|354473531|ref|XP_003498988.1| PREDICTED: nucleoporin Nup43-like isoform 1 [Cricetulus griseus]
gi|354473533|ref|XP_003498989.1| PREDICTED: nucleoporin Nup43-like isoform 2 [Cricetulus griseus]
Length = 380
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 132 APCTGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ GS +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGSEPCQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|165970738|gb|AAI58757.1| LOC683983 protein [Rattus norvegicus]
Length = 378
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 132 APCTGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ GS +L G+ +H VD HP ++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q ++ +S + EA E+WEV H SN CSEDG
Sbjct: 244 IWDVR--QGTMPVSLLKAHEA--------EMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|195037589|ref|XP_001990243.1| GH18341 [Drosophila grimshawi]
gi|193894439|gb|EDV93305.1| GH18341 [Drosophila grimshawi]
Length = 354
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 20/239 (8%)
Query: 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSL---ETHSISLPASLTP--HSQWTPPT 72
S+ + VRWLP ++ V +D D + L + + TP + +
Sbjct: 11 SEKVSNVRWLPEQLQQTERFVTGSWDMDNNYVRLWRLHANPYAQEVQHTPRCNDKVAMDG 70
Query: 73 RISSLSTSHQSLVAASTLSGSLHVLSSAMQV----LLSVDENSGFH-------VGPISGV 121
++ L ++ +A S G L +L V L ++ + H P + +
Sbjct: 71 DVTGLEFVNEDTLAVSCADGHLSLLKVHRAVEEDQLERMERSERLHEFKCSQKSAPCTAI 130
Query: 122 DLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQ 181
D+ G++ +VGEDG VN++S + KR D + + V + + + VTG ++
Sbjct: 131 DIYGNDIATVGEDGCVNVLSAHNLKQVKRTIDADS-ISLLSVCFVNQHQLVTGNRMGVIR 189
Query: 182 WWDLRRAGSGGPVLQFKGNFGSQG-KASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
D+R +G + F SQ K S + ++ HP ++H + G G++ WDLR
Sbjct: 190 MLDVRVDSTGQQDISFAA--ASQDPKNSNFVSAMATHPMQQHILICGSEEGSITVWDLR 246
>gi|189491883|ref|NP_001121663.1| nucleoporin 43 [Rattus norvegicus]
gi|149039525|gb|EDL93687.1| rCG57407 [Rattus norvegicus]
Length = 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 106 APCTGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVN 164
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ GS +L G+ +H VD HP ++H GG G +
Sbjct: 165 SIGQLKIWDFRQQGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLS 217
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q ++ +S + EA E+WEV H SN CSEDG
Sbjct: 218 IWDVR--QGTMPVSLLKAHEA--------EMWEV----HFHPSNPDH-----LFTCSEDG 258
Query: 295 IL 296
L
Sbjct: 259 SL 260
>gi|170046907|ref|XP_001850986.1| nucleoporin Nup43 [Culex quinquefasciatus]
gi|167869494|gb|EDS32877.1| nucleoporin Nup43 [Culex quinquefasciatus]
Length = 381
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 101 MQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGF 160
+ L D S + P + + + ++ +VGEDGR+N++S +G + + G
Sbjct: 123 FENLHRFDTFSTLNGAPCTALSVHDTDVATVGEDGRLNVLSTVGQKVLRSI-SGADSCTI 181
Query: 161 NCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSR 220
+CV + +P E +TG ++ +D+R A S P F + + K S + + HP++
Sbjct: 182 SCVAFLNPKEVLTGNRLGIIKCFDIR-AESQKPTGSFAVSCEDE-KRSNSVTCLAYHPTQ 239
Query: 221 KHTCLAGGSSGTVFAWDLRWQQ 242
+H LAG G++ WDLR Q
Sbjct: 240 RHIILAGSEEGSITVWDLRQPQ 261
>gi|118600912|gb|AAH40121.1| NUP43 protein [Homo sapiens]
Length = 287
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 39 APCTGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 97
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 98 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 150
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q ++ +S + EA E+WEV + S CSEDG
Sbjct: 151 IWDVR--QGTMPVSLLKAHEA--------EMWEVHF---------HPSNPEHLFTCSEDG 191
Query: 295 IL 296
L
Sbjct: 192 SL 193
>gi|350397130|ref|XP_003484779.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15-like [Bombus impatiens]
Length = 1039
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGY 178
+G+ + VSVGEDGR+NL++ + + D + C+ + E +TG
Sbjct: 124 TGLSTFEQDIVSVGEDGRINLLTAGQKQPIRSINDADS-CSIYCIDFLRHNEILTGNLRG 182
Query: 179 GLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
++ WDLR P F + S+ +A+ + H HP+++H +AGG G++ WDL
Sbjct: 183 HMKVWDLRN-DQDLPATTFMLSDQSKTEATSIAH----HPTQRHIVVAGGGDGSLTVWDL 237
Query: 239 R 239
R
Sbjct: 238 R 238
>gi|340725762|ref|XP_003401235.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15-like [Bombus terrestris]
Length = 1039
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGY 178
+G+ + VSVGEDGR+NL++ + + D + C+ + E +TG
Sbjct: 124 TGLSTFEQDIVSVGEDGRINLLTAGQKQPIRSINDADS-CSIYCIDFLRHNEILTGNLRG 182
Query: 179 GLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
++ WDLR P F + S+ +A+ + H HP+++H +AGG G++ WDL
Sbjct: 183 HMKVWDLRN-DQDLPATTFMLSDQSKTEATSIAH----HPTQRHIVVAGGGDGSLTVWDL 237
Query: 239 R 239
R
Sbjct: 238 R 238
>gi|312285640|gb|ADQ64510.1| hypothetical protein [Bactrocera oleae]
Length = 262
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P V + E +VGEDGR+NL+S + +R + + + VK+ +P E +T
Sbjct: 126 APCVAVSVFEREIATVGEDGRLNLISANDVKKIRRTLEADS-IALTAVKYVNPHEVLTAN 184
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ +D R V F + + + + ++ HP++ H LAG G++
Sbjct: 185 RMGVIRMFDTRATDEEVAVTAFMTSCEDERRP-NYVSALTSHPTQPHIVLAGSEEGSITV 243
Query: 236 WDLR 239
WDLR
Sbjct: 244 WDLR 247
>gi|242008631|ref|XP_002425106.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508771|gb|EEB12368.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 341
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 19/261 (7%)
Query: 12 VHRFPQSKYIDAVRWLPPLSPLSKLAV------LAIYDTDADSPSLETHSISLPASLTPH 65
VH S+ I +RW P S+ V + Y T + P +T S + P
Sbjct: 5 VHSTFVSQKISKIRWKPEQLSESQYFVTGGTDEINNYLTLWNYPIKQTDSENYPLKERTF 64
Query: 66 SQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHV---GPISGVD 122
S T + L H + ++ L S +++ + ++ + P +G+
Sbjct: 65 SHLGDVTDMKFLLNDHLVVSSSCGFVTLLQCDQSDFRLITTWEKLHYYKTKEPSPCTGLA 124
Query: 123 LTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQW 182
+ ++GEDGR+ L++++ RV + C+ + E +TG ++
Sbjct: 125 CFEEDIATIGEDGRIVLLTLVQTKPI-RVIESLNSSSHLCIDFLKHNELLTGDLRGQMKI 183
Query: 183 WDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ 242
WDLR P+ F S + + M + +H S+KH L GG G+V+ WDLR
Sbjct: 184 WDLR-VPENCPLTTF---MLSGDQIAAM--CIAVHSSQKHILLVGGEDGSVYVWDLRKST 237
Query: 243 QSIVLSGVGTG---EAVTHSL 260
I + G E V H L
Sbjct: 238 HPINIINAHKGSVSEMVFHPL 258
>gi|432112798|gb|ELK35396.1| Nucleoporin Nup43 [Myotis davidii]
Length = 380
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL V E R D + V + E +T
Sbjct: 132 APCTGVVCNSPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|195497635|ref|XP_002096184.1| GE25534 [Drosophila yakuba]
gi|194182285|gb|EDW95896.1| GE25534 [Drosophila yakuba]
Length = 359
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 24/243 (9%)
Query: 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSL-----ETHSISLPASLTPHSQWTPPT 72
S+ + VRWLP S+ V +D D + L ++ + + + +
Sbjct: 12 SEKVARVRWLPEQLQQSERFVTGSWDMDQNFVRLWRLQSNQYATATDSDVDQMPRCMDKV 71
Query: 73 R----ISSLSTSHQSLVAASTLSGSLHVLSSAMQV----LLSVDENSGFHV-------GP 117
R ++++ + +A S G L V + V + + H P
Sbjct: 72 RMEDDVTAMEFVDKDTLAVSCADGHLSVFNVQRAVEEDQMQRTSRSGRLHCFQRSQEPAP 131
Query: 118 ISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG 177
+G+ + G++ + GEDG V++VSV + KR D + + F+ + + S E VT
Sbjct: 132 CTGLSVYGTDIATAGEDGCVSIVSVGNVRQVKRHIDADSMALFS-ICYISQQELVTANRM 190
Query: 178 YGLQWWDLRRAGSGGPVLQFKGNFGSQG-KASGMIHSVDIHPSRKHTCLAGGSSGTVFAW 236
++ D R A P F SQ K+S + S+ HP ++H L G G++ W
Sbjct: 191 GVIRMLDARVATEAQPKTTFM--VASQDDKSSNFVSSLATHPMQQHILLCGSEEGSITVW 248
Query: 237 DLR 239
D+R
Sbjct: 249 DMR 251
>gi|38605733|ref|NP_942590.1| nucleoporin Nup43 [Homo sapiens]
gi|27923819|sp|Q8NFH3.1|NUP43_HUMAN RecName: Full=Nucleoporin Nup43; AltName: Full=Nup107-160
subcomplex subunit Nup43; AltName: Full=p42
gi|21717642|gb|AAM76708.1|AF514997_1 nucleoporin Nup43 [Homo sapiens]
gi|40787641|gb|AAH65028.1| Nucleoporin 43kDa [Homo sapiens]
Length = 380
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV++ + +H GP +GV E V
Sbjct: 86 ERIVAASSTGCVTVFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL E R D + V + E +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R Q ++ +S
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGTMPVS 255
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+ EA E+WEV + S CSEDG L
Sbjct: 256 LLKAHEA--------EMWEVHF---------HPSNPEHLFTCSEDGSL 286
>gi|332825218|ref|XP_527530.3| PREDICTED: uncharacterized protein LOC472151 [Pan troglodytes]
gi|397480599|ref|XP_003811566.1| PREDICTED: nucleoporin Nup43 [Pan paniscus]
gi|410215320|gb|JAA04879.1| nucleoporin 43kDa [Pan troglodytes]
gi|410288534|gb|JAA22867.1| nucleoporin 43kDa [Pan troglodytes]
gi|410341553|gb|JAA39723.1| nucleoporin 43kDa [Pan troglodytes]
Length = 380
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV++ + +H GP +GV E V
Sbjct: 86 ERIVAASSTGCVTVFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL E R D + V + E +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R Q ++ +S
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGTMPVS 255
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+ EA E+WEV + S CSEDG L
Sbjct: 256 LLKAHEA--------EMWEVHF---------HPSNPEHLFTCSEDGSL 286
>gi|345482402|ref|XP_003424589.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15-like [Nasonia vitripennis]
Length = 1041
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 59 PASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGF----- 113
PA +T + T I + H S+ +G++ VL + + E + +
Sbjct: 60 PACITSYPVIGDVTEIKFIGPDH---FVCSSSAGNVKVLKLQDEPFPEIKEENAWDKIHR 116
Query: 114 --HVGPISGVDLTGSE--CVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPT 169
+ P S L+ E V+VGEDGR+NL++ + + + + CV + +
Sbjct: 117 FRYKEPASCTALSTFEQDIVTVGEDGRINLLTAQQKNPVRTIDEADS-CSLYCVDFLRHS 175
Query: 170 EFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS 229
E +TG ++ WDLR + P + ++ +A+ + H HP++KH +AGG
Sbjct: 176 EILTGNIRGHMKVWDLR-SDQDTPSTTIMLSEQTKTEATSIAH----HPTQKHIVVAGGG 230
Query: 230 SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEV 265
G++ WDLR+ T + HS S SE+
Sbjct: 231 DGSLTVWDLRYNTYP-------TSQLSAHSKSVSEI 259
>gi|297679404|ref|XP_002817515.1| PREDICTED: nucleoporin Nup43 [Pongo abelii]
Length = 380
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV++ + +H GP +GV E V
Sbjct: 86 ERIVAASSTGCVTVFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL E R D + V + E +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLNIWDVR--------- 248
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
GT E+E+WEV + S CSEDG L
Sbjct: 249 -QGTMPVSLLKAHEAEMWEVHF---------HPSNPDHLFTCSEDGSL 286
>gi|193788298|dbj|BAG53192.1| unnamed protein product [Homo sapiens]
Length = 380
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV++ + +H GP +GV E V
Sbjct: 86 ERIVAASSTGCVTVFLHHPDNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL E R D + V + E +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R Q ++ +S
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGTMPVS 255
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+ EA E+WEV + S CSEDG L
Sbjct: 256 LLKAHEA--------EMWEVHF---------HPSNPEHLFTCSEDGSL 286
>gi|301770275|ref|XP_002920554.1| PREDICTED: nucleoporin Nup43-like [Ailuropoda melanoleuca]
Length = 380
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ + E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGIVCSNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRKQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|453056209|pdb|4I79|A Chain A, Crystal Structure Of Human Nup43
gi|453056210|pdb|4I79|B Chain B, Crystal Structure Of Human Nup43
Length = 399
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV++ + +H GP +GV E V
Sbjct: 105 ERIVAASSTGCVTVFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEIV 164
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL E R D + V + E +T L+ WD R+ G
Sbjct: 165 TVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 223
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R
Sbjct: 224 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--------- 267
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
GT E+E+WEV + S CSEDG L
Sbjct: 268 -QGTMPVSLLKAHEAEMWEVHF---------HPSNPEHLFTCSEDGSL 305
>gi|444732493|gb|ELW72785.1| Serine/threonine-protein kinase LATS1 [Tupaia chinensis]
Length = 1385
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 14/171 (8%)
Query: 113 FHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFV 172
+ P +G+ + E V+VGEDGR+NL E R D + V + E +
Sbjct: 103 YSSAPCTGIVCSSPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEIL 161
Query: 173 TGGFGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG 231
T L+ WD R+ G+ +L G+ +H VD HP+++H GG G
Sbjct: 162 TVNSIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDG 214
Query: 232 TVFAWDLRWQQQSIVLSGVGTGE-----AVTHSLSESEVWEVQYDCHTKSS 277
+ WD+R + L E ++ L +S VW D K S
Sbjct: 215 MLSIWDVRQGTMPVSLLKAHEAERESSGSIKELLQKSSVWVPYIDVFMKRS 265
>gi|410960214|ref|XP_003986689.1| PREDICTED: nucleoporin Nup43 [Felis catus]
Length = 380
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 73/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCDNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRKQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|355708423|gb|AES03263.1| nucleoporin 43kDa [Mustela putorius furo]
Length = 380
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV + E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCSNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRKQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|119568176|gb|EAW47791.1| hCG21011, isoform CRA_c [Homo sapiens]
Length = 354
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 106 APCTGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 164
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 165 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 217
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV + S CSEDG
Sbjct: 218 IWDVR----------QGTMPVSLLKAHEAEMWEVHF---------HPSNPEHLFTCSEDG 258
Query: 295 IL 296
L
Sbjct: 259 SL 260
>gi|117646882|emb|CAL37556.1| hypothetical protein [synthetic construct]
Length = 380
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 88/228 (38%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV++ + +H GP +GV E V
Sbjct: 86 ERIVAASSTGCVTVFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL E R D + V + E +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--------- 248
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
GT E E+WEV + + CSEDG L
Sbjct: 249 -QGTMPVSLLKAHEVEMWEVHFHPSNPEHRFT---------CSEDGSL 286
>gi|332213598|ref|XP_003255912.1| PREDICTED: uncharacterized protein LOC100600199 [Nomascus
leucogenys]
Length = 380
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q ++ +S + EA E+WEV H SN CSEDG
Sbjct: 244 IWDVR--QGTMPVSLLKAHEA--------EMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|426354871|ref|XP_004044865.1| PREDICTED: nucleoporin Nup43 [Gorilla gorilla gorilla]
Length = 380
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 93/228 (40%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LS+++ + +H GP +GV E V
Sbjct: 86 ERIVAASSTGCVTVFLHHPNNQTLSINQQWTTAHYHTGPGSPSYSSAACTGVVCNNPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL E R D + V + E +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R Q ++ +S
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGTMPVS 255
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+ EA E+WEV + S CSEDG L
Sbjct: 256 LLKAHEA--------EMWEVHF---------HPSNPDHLFTCSEDGSL 286
>gi|402867988|ref|XP_003898108.1| PREDICTED: nucleoporin Nup43 [Papio anubis]
Length = 380
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q ++ +S + EA E+WEV H SN CSEDG
Sbjct: 244 IWDVR--QGTMPVSLLKAHEA--------EMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|194227589|ref|XP_001495518.2| PREDICTED: nucleoporin Nup43 [Equus caballus]
Length = 380
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV + E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCSNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|291412426|ref|XP_002722479.1| PREDICTED: nucleoporin 43kDa [Oryctolagus cuniculus]
Length = 380
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCDNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q ++ +S + EA E+WEV H SN CSEDG
Sbjct: 244 IWDVR--QGTMPVSLLKAHEA--------EMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|73946126|ref|XP_541148.2| PREDICTED: nucleoporin Nup43 [Canis lupus familiaris]
Length = 380
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCNSPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRKQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV + S CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEVHF---------HPSNPDHLFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|395834638|ref|XP_003790302.1| PREDICTED: nucleoporin Nup43 [Otolemur garnettii]
Length = 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV++ + +H GP +GV E V
Sbjct: 86 ERIVAASSTGCVTIFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCHNPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL E R D + V + E +T L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
+ +L G+ +H VD HP+++H GG G + WD+R
Sbjct: 205 NEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--------- 248
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
GT E+E+WEV H SN CSEDG L
Sbjct: 249 -QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDGSL 286
>gi|383414231|gb|AFH30329.1| nucleoporin Nup43 [Macaca mulatta]
Length = 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHSVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q ++ +S + EA E+WEV H SN CSEDG
Sbjct: 244 IWDVR--QGTMPVSLLKAHEA--------EMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|403306197|ref|XP_003943627.1| PREDICTED: nucleoporin Nup43 [Saimiri boliviensis boliviensis]
Length = 354
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 73/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ E V+VGEDGR+NL E R D + V + E +T
Sbjct: 106 APCTGIVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 164
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 165 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 217
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 218 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 258
Query: 295 IL 296
L
Sbjct: 259 SL 260
>gi|426234955|ref|XP_004011457.1| PREDICTED: nucleoporin Nup43 [Ovis aries]
Length = 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 72/182 (39%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPTQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV + S CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEVHF---------HPSNPDHLFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|202028836|gb|ACH95299.1| FI09332p [Drosophila melanogaster]
Length = 379
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + + G++ + GEDG V++VSV + KR + + + F+ + + S E VT
Sbjct: 151 APCTDLSVYGTDIATAGEDGCVSIVSVENVRQVKRQIEADSMALFS-ICYISQQELVTAN 209
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ D R A P F SQ S + S+ HP ++H L G G++
Sbjct: 210 RMGVIRMLDARVATEAQPKTTFM--VASQDDKSNFVSSLAKHPMQQHILLCGSEEGSITV 267
Query: 236 WDLR 239
WD+R
Sbjct: 268 WDMR 271
>gi|194033461|ref|XP_001929004.1| PREDICTED: nucleoporin Nup43 [Sus scrofa]
Length = 380
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL K + + + + V + E +T
Sbjct: 132 APCTGVVCNSPEIVTVGEDGRINLFRADYKEAIKTIDNADSST-LHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RAPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|74226749|dbj|BAE27021.1| unnamed protein product [Mus musculus]
Length = 380
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 82 QSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGP---------ISGVDLTGSECV 129
+ +VAAS+ L LSV++ + +H GP +G+ E V
Sbjct: 86 ERIVAASSTGCVTVFLQRPNNQTLSVNQQWPAAHYHTGPSSPSYSSAPCTGIVCDNPEIV 145
Query: 130 SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG 189
+VGEDGR+NL V E R D + V + E VT L+ WD R+ G
Sbjct: 146 TVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVNSIGQLKIWDFRQQG 204
Query: 190 SG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
S +L G+ +H VD HP ++H GG G + WD+R
Sbjct: 205 SEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLSIWDVR--------- 248
Query: 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
GT E+E+WEV H SN CSEDG L
Sbjct: 249 -QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDGSL 286
>gi|24647938|ref|NP_650716.2| nucleoporin 43 [Drosophila melanogaster]
gi|7300383|gb|AAF55542.1| nucleoporin 43 [Drosophila melanogaster]
Length = 358
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + + G++ + GEDG V++VSV + KR + + + F+ + + S E VT
Sbjct: 130 APCTDLSVYGTDIATAGEDGCVSIVSVENVRQVKRQIEADSMALFS-ICYISQQELVTAN 188
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ D R A P F SQ S + S+ HP ++H L G G++
Sbjct: 189 RMGVIRMLDARVATEAQPKTTFM--VASQDDKSNFVSSLAKHPMQQHILLCGSEEGSITV 246
Query: 236 WDLR 239
WD+R
Sbjct: 247 WDMR 250
>gi|355748830|gb|EHH53313.1| hypothetical protein EGM_13928 [Macaca fascicularis]
Length = 380
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 72/182 (39%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCVGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV H SN CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|26354845|dbj|BAC41049.1| unnamed protein product [Mus musculus]
Length = 380
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGY 178
+G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 135 TGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVNSIG 193
Query: 179 GLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
L+ WD R+ GS +L G+ +H VD HP ++H GG G + WD
Sbjct: 194 QLKIWDFRQQGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLSIWD 246
Query: 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+R GT E+E+WEV H SN CSEDG L
Sbjct: 247 VR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDGSL 286
>gi|326915724|ref|XP_003204163.1| PREDICTED: nucleoporin Nup43-like [Meleagris gallopavo]
Length = 378
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 80/197 (40%), Gaps = 36/197 (18%)
Query: 109 ENSGFHV--------GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGF 160
EN+ +H +GV E V+VGEDGR+NL E R D
Sbjct: 120 ENAHYHADQYTACGGAACTGVICNNPEIVTVGEDGRINLFRA-DQKEAVRTIDNADSSTL 178
Query: 161 NCVKWASPTEFVTGGFGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPS 219
+ V + TE +T L+ WD R+ + + G+ +H VD HPS
Sbjct: 179 HAVTFLRTTEILTVNSIGQLKIWDFRQQRNEPAQIFSLTGD-------RVPLHCVDRHPS 231
Query: 220 RKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNI 279
++H GG G + WD+R Q ++ +S + EA E+WEV H SN
Sbjct: 232 QQHIVATGGQDGMLSIWDIR--QGTMPVSLLNAHEA--------EMWEV----HFHPSNP 277
Query: 280 SSSRVLPAMFCSEDGIL 296
CSEDG L
Sbjct: 278 DH-----LFTCSEDGSL 289
>gi|166295220|ref|NP_663752.2| nucleoporin Nup43 [Mus musculus]
gi|341941204|sp|P59235.2|NUP43_MOUSE RecName: Full=Nucleoporin Nup43; AltName: Full=Nup107-160
subcomplex subunit Nup43
Length = 380
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGY 178
+G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 135 TGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVNSIG 193
Query: 179 GLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
L+ WD R+ GS +L G+ +H VD HP ++H GG G + WD
Sbjct: 194 QLKIWDFRQQGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLSIWD 246
Query: 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+R GT E+E+WEV H SN CSEDG L
Sbjct: 247 VR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDGSL 286
>gi|148671597|gb|EDL03544.1| nucleoporin 43, isoform CRA_a [Mus musculus]
Length = 396
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGY 178
+G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 151 TGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVNSIG 209
Query: 179 GLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
L+ WD R+ GS +L G+ +H VD HP ++H GG G + WD
Sbjct: 210 QLKIWDFRQQGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLSIWD 262
Query: 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+R GT E+E+WEV H SN CSEDG L
Sbjct: 263 VR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDGSL 302
>gi|148671598|gb|EDL03545.1| nucleoporin 43, isoform CRA_b [Mus musculus]
Length = 354
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGY 178
+G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 109 TGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVNSIG 167
Query: 179 GLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
L+ WD R+ GS +L G+ +H VD HP ++H GG G + WD
Sbjct: 168 QLKIWDFRQQGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLSIWD 220
Query: 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+R GT E+E+WEV H SN CSEDG L
Sbjct: 221 VR----------QGTMPVSLLKAHEAEMWEV----HFHPSNPDH-----LFTCSEDGSL 260
>gi|355561987|gb|EHH18619.1| hypothetical protein EGK_15263 [Macaca mulatta]
Length = 380
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCVGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ G+ +L G+ +H VD HP+++H GG G
Sbjct: 191 SIGQLKIWDFRQQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGIFS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q ++ +S + EA E+WEV H SN CSEDG
Sbjct: 244 IWDVR--QGTMPVSLLKAHEA--------EMWEV----HFHPSNPDH-----LFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|390334509|ref|XP_784173.3| PREDICTED: nucleoporin Nup43-like [Strongylocentrotus purpuratus]
Length = 403
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 121 VDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGL 180
V + G++ + GEDGR+N++ + + + + + N + E +T L
Sbjct: 151 VAVNGTDISTCGEDGRINVLRLEHRQPIRTIDEADS-CSINALTHLKQHEVITVNSAGQL 209
Query: 181 QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240
+ WDLR+ GS Q F G+ + H VD HP++ H GG +G + WD+R
Sbjct: 210 KIWDLRQPGS-----QPTRFFIVSGEKVPL-HCVDRHPTQPHLVATGGQNGILNIWDMRK 263
Query: 241 QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+Q + L V +S VWEV++ H S N CS+DG +
Sbjct: 264 EQLPVTLFDV----------HQSHVWEVKF--HPTSPN-------NLFTCSDDGTV 300
>gi|196005215|ref|XP_002112474.1| hypothetical protein TRIADDRAFT_25574 [Trichoplax adhaerens]
gi|190584515|gb|EDV24584.1| hypothetical protein TRIADDRAFT_25574 [Trichoplax adhaerens]
Length = 392
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 34/218 (15%)
Query: 85 VAASTLSGSLHVL--SSAMQVLLSVDENSGFH-----VGPISGVDLTGSECVSVGEDGRV 137
+ S+ +GSL ++ S Q L S+ + H P +G + ++VGED R+
Sbjct: 116 LMTSSSNGSLELIQFSRPRQELQSISKWKNIHHFSSNSCPCTGFSVNLPNIITVGEDSRI 175
Query: 138 NLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRR-AGSGGPVLQ 196
N++ + + D N V +EF+T L+ WDLR+ V+
Sbjct: 176 NILKIDVQAPIATIEDNISSCSINAVTCEGISEFITVDSMGRLKVWDLRQPYDKPAKVMV 235
Query: 197 FKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAV 256
G + +D HP++ H + G G++ WDLR + V+
Sbjct: 236 LSG-------EQTCLQCIDQHPNQPHVAITGSHDGSIIIWDLRQDKYPTVVLKAHM---- 284
Query: 257 THSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
S VWEV++ H ++ CS+DG
Sbjct: 285 ------STVWEVRFHRHFPNN---------LFTCSDDG 307
>gi|47086251|ref|NP_998057.1| nucleoporin Nup43 [Danio rerio]
gi|42744539|gb|AAH66616.1| Nucleoporin 43 [Danio rerio]
Length = 372
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 75/182 (41%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + E VSVGEDGRV L E RV + + V + TE +T
Sbjct: 126 APCTAIVCRSPEIVSVGEDGRVILYKA-DQAEVTRVIENADSSTIHAVTFLRTTEVLTVN 184
Query: 176 FGYGLQWWDLRR-AGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ + S +L G+ +H VD HP+++H GG G +
Sbjct: 185 SIGQLKMWDFRQQSDSPAQILSLTGDRMP-------LHCVDKHPNQQHIVATGGQDGMLC 237
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R L+ HS +E+WEV + H + N CSEDG
Sbjct: 238 IWDVRQGNTPFSLTEA-------HS---AEMWEVHF--HPSNPN-------HLFTCSEDG 278
Query: 295 IL 296
L
Sbjct: 279 SL 280
>gi|159487529|ref|XP_001701775.1| hypothetical WD40 domain protein [Chlamydomonas reinhardtii]
gi|158280994|gb|EDP06750.1| hypothetical WD40 domain protein [Chlamydomonas reinhardtii]
Length = 418
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 154 GNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG---- 209
G+G VG+ C +W + FVT GL+ WD+R + PV + +G+ G
Sbjct: 272 GSGCVGYTCARWVDRSLFVTSRTVGGLEVWDVRCPPT--PVSRSAPEWGATGLGPADRGC 329
Query: 210 --MIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248
I+S+ +HPSR C +GG+ G+V WDLR + + L+
Sbjct: 330 HRAIYSLQVHPSRPDVCASGGAGGSVALWDLRSSTRPLGLT 370
>gi|194900212|ref|XP_001979651.1| GG22870 [Drosophila erecta]
gi|190651354|gb|EDV48609.1| GG22870 [Drosophila erecta]
Length = 359
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 24/243 (9%)
Query: 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSL-----ETHSISLPASLTPHSQWTPPT 72
S+ + VRWLP S+ V +D D + L ++ + + + +
Sbjct: 12 SEKVARVRWLPEQLQQSERFVTGTWDMDQNFVRLWRLQSNQYATATDSDVDQMPRCMDKV 71
Query: 73 R----ISSLSTSHQSLVAASTLSGSLHVLSSAMQV----LLSVDENSGFHV-------GP 117
R ++++ + +A S G L V + V + + H P
Sbjct: 72 RMEDDVTAMEFVDKDTLAVSCADGHLSVFNVQRAVEEDQMQRTSRSERLHCFQRSQEPAP 131
Query: 118 ISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG 177
+ + + G++ + GEDG V++VSV + KR + + + F+ + + S E VT
Sbjct: 132 CTDLSVYGTDIATAGEDGCVSIVSVGNVRQVKRHIEADSMALFS-ICYISQQELVTANRM 190
Query: 178 YGLQWWDLRRAGSGGPVLQFKGNFGSQG-KASGMIHSVDIHPSRKHTCLAGGSSGTVFAW 236
++ D R A P F SQ K+S + S+ HP ++H L G G++ W
Sbjct: 191 GVIRVLDARVATEAQPKTTFM--VASQDDKSSNFVSSLATHPMQQHILLCGSEEGSITVW 248
Query: 237 DLR 239
D+R
Sbjct: 249 DMR 251
>gi|56079015|gb|AAH52530.2| Nup43 protein, partial [Mus musculus]
Length = 375
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 19/153 (12%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGY 178
+G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 130 TGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSSTLHAVTFLRTPEIVTVNSIG 188
Query: 179 GLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
L+ WD R+ GS +L G+ +H VD HP ++H GG G + WD
Sbjct: 189 QLKIWDFRQQGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLSIWD 241
Query: 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQY 270
+R GT E+E+WEV +
Sbjct: 242 VR----------QGTMPVSLLKAHEAEMWEVHF 264
>gi|17946452|gb|AAL49259.1| RE68083p [Drosophila melanogaster]
gi|54650570|gb|AAV36864.1| RE68483p [Drosophila melanogaster]
Length = 248
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + + G++ + GEDG V++VSV + KR + + + F+ + + S E VT
Sbjct: 20 APCTDLSVYGTDIATAGEDGCVSIVSVENVRQVKRQIEADSMALFS-ICYISQQELVTAN 78
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ D R A P F SQ S + S+ HP ++H L G G++
Sbjct: 79 RMGVIRMLDARVATEAQPKTTFM--VASQDDKSNFVSSLAKHPMQQHILLCGSEEGSITV 136
Query: 236 WDLR 239
WD+R
Sbjct: 137 WDMR 140
>gi|345305806|ref|XP_001506181.2| PREDICTED: nucleoporin Nup43-like [Ornithorhynchus anatinus]
Length = 359
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + V E V+VGEDGR+NL V + R D + V + E +T
Sbjct: 111 APCTSVACNNPEIVTVGEDGRINLFRV-DHKDAVRTIDNADSSTLHAVTFLRTPEILTVN 169
Query: 176 FGYGLQWWDLRRA-GSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ +L G+ +H VD HP+++H GG G +
Sbjct: 170 SIGQLKIWDFRQQENEPSQILSLTGDRVP-------LHCVDRHPNQQHVVATGGQDGMLS 222
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q S+ +S + EA E+WEV + S CSEDG
Sbjct: 223 IWDVR--QGSMPVSLLKAHEA--------EMWEVHF---------HPSNPDHLFTCSEDG 263
Query: 295 IL 296
L
Sbjct: 264 SL 265
>gi|327279959|ref|XP_003224722.1| PREDICTED: nucleoporin Nup43-like [Anolis carolinensis]
Length = 365
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 92/224 (41%), Gaps = 35/224 (15%)
Query: 82 QSLVAASTLSGSLHVLSSAMQ-VLLSVD---ENSGFH-----VGPISGVDLTGSECVSVG 132
Q + A++ +GS+ V LSV EN+ F+ P +G+ E +VG
Sbjct: 85 QERIVAASSTGSVTVFRHHQNNQTLSVSQKWENAHFYDPSHGNAPCTGIVCNSPEIFTVG 144
Query: 133 EDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGG 192
EDGR+N+ + E R D + V TE +T L+ WD R+ G+
Sbjct: 145 EDGRINVFTA-DRKEAVRTVDNADSSTLHAVTRLRTTEILTVNSIGQLKIWDFRQQGNEP 203
Query: 193 PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGT 252
+ F G+ + H VD HPS++H G G + WD+R Q I +S +
Sbjct: 204 SQI-----FSLTGERIPL-HCVDRHPSQQHIVATGSQDGMLSIWDVR--QGDIPVSLLNA 255
Query: 253 GEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
EA E+WEV + S CSEDG L
Sbjct: 256 HEA--------ELWEVHF---------HPSNPDHLFTCSEDGTL 282
>gi|440895107|gb|ELR47380.1| Nucleoporin Nup43, partial [Bos grunniens mutus]
Length = 381
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 70/182 (38%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 133 APCTGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 191
Query: 176 FGYGLQWWDLRRA-GSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ +L G+ +H VD HP+++H GG G +
Sbjct: 192 SIGQLKIWDFRQQRNEPTQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 244
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV + S CSEDG
Sbjct: 245 IWDVR----------QGTMPVSLLKAHEAEMWEVHF---------HPSNPDHLFTCSEDG 285
Query: 295 IL 296
L
Sbjct: 286 SL 287
>gi|198425061|ref|XP_002127557.1| PREDICTED: similar to nucleoporin 43kDa [Ciona intestinalis]
Length = 335
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 146/345 (42%), Gaps = 44/345 (12%)
Query: 18 SKYIDAVRWLPPLSPLSKLAVLAI--YDTDADSPSL----ETHSISLPASL--------T 63
S+ + VRW P + L K +V A Y+ +S SL +T+ + +
Sbjct: 9 SQKMSRVRWKPNSTSLQKSSVFAAGSYEDTKNSVSLWEITQTNKLKNNPEMEDIDNGQPR 68
Query: 64 PHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDL 123
S + +S L + SL+ A T G + + +S+ ++L + N G + V
Sbjct: 69 KFSSYAVKGDVSGLDYADSSLIVAGTSCGDILLFNSSESLVLQHEWNRLHGRGGCTDVAT 128
Query: 124 TGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWW 183
+ VSVGEDG +NL+ + + + G+ V++ + +E VT L+ W
Sbjct: 129 SLPGIVSVGEDGNINLMRIESKRPLRVIEHGDS-CPITSVRYLTSSEIVTTNTVGQLRMW 187
Query: 184 DLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ 243
D R + + Q A + SVD H ++ H GG+ G V +D+R +
Sbjct: 188 DTRSPSDSPTRIMVSSD---QLVA---LRSVDHHATQSHVLATGGADGCVTLFDIRKECA 241
Query: 244 SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKS-----SNISSSRVLPAMFCSEDGILAV 298
+ + H + +VWEV++ + S S S+R L + F + ++A
Sbjct: 242 PV-------NKLQVH---DEDVWEVRFHKTSPSHLFTCSQDGSARRLDSTF--DLKVMAR 289
Query: 299 VEQGEEP-FELLAEPC--AINSFDIDPQNPSDVICSLEWESIAIV 340
G P + C +INS D+ + S ++C + E+I ++
Sbjct: 290 DGGGSAPEVSEVVSKCGLSINSLDV---SGSSLVCCNDAEAIYVI 331
>gi|156718122|ref|NP_001096566.1| nucleoporin Nup43 [Bos taurus]
gi|126717385|gb|AAI33316.1| NUP43 protein [Bos taurus]
gi|296483920|tpg|DAA26035.1| TPA: nucleoporin 43kDa [Bos taurus]
Length = 380
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 70/182 (38%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+NL E R D + V + E +T
Sbjct: 132 APCTGVVCNNPEIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHAVTFLRTPEILTVN 190
Query: 176 FGYGLQWWDLRRA-GSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ +L G+ +H VD HP+++H GG G +
Sbjct: 191 SIGQLKIWDFRQQRNEPTQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLS 243
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R GT E+E+WEV + S CSEDG
Sbjct: 244 IWDVR----------QGTMPVSLLKAHEAEMWEVHF---------HPSNPDHLFTCSEDG 284
Query: 295 IL 296
L
Sbjct: 285 SL 286
>gi|410916969|ref|XP_003971959.1| PREDICTED: nucleoporin Nup43-like [Takifugu rubripes]
Length = 371
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV + E V+VGEDGR+ + G RV + + V + TE +T
Sbjct: 126 APCTGVVCSSPEIVTVGEDGRIVVFRADQEG-VNRVIENADSSTIHAVTYLRTTEILTVN 184
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ S +L G+ +H VD HP+++H GG G +
Sbjct: 185 SIGQLKMWDFRQQSSSPAQILSLSGDRVP-------LHCVDRHPNQQHIVATGGQDGMLC 237
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R G+ +E+WEV H SN CSEDG
Sbjct: 238 VWDMR----------QGSAPFSLMEAHSAEMWEV----HFHPSNPDH-----LFTCSEDG 278
Query: 295 IL 296
L
Sbjct: 279 SL 280
>gi|380806773|gb|AFE75262.1| nucleoporin Nup43, partial [Macaca mulatta]
Length = 243
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 127 ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLR 186
E V+VGEDGR+NL E R D + V + E +T L+ WD R
Sbjct: 6 EIVTVGEDGRINLFRA-DHKEAVRTIDNADSSTLHSVTFLRTPEILTVNSIGQLKIWDFR 64
Query: 187 RAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSI 245
+ G+ +L G+ +H VD HP+++H GG G + WD+R Q ++
Sbjct: 65 QQGNEPSQILSLTGD-------RVPLHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGTM 115
Query: 246 VLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+S + EA E+WEV + S CSEDG L
Sbjct: 116 PVSLLKAHEA--------EMWEVHF---------HPSNPDHLFTCSEDGSL 149
>gi|194743268|ref|XP_001954122.1| GF16901 [Drosophila ananassae]
gi|190627159|gb|EDV42683.1| GF16901 [Drosophila ananassae]
Length = 362
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + + G++ + GEDG VN++S + KR + + L F V + S + V
Sbjct: 133 APCTDISVYGTDIATAGEDGCVNILSSSNIRQVKRHIEADSLALF-AVSFISQNQLVAAN 191
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ D+R A P + F K S + S+ HP ++H L G G++
Sbjct: 192 RMGVIRMLDVRVASEAQPKVNFMV-ACKDDKNSNFVSSITSHPMQQHILLCGTEEGSITV 250
Query: 236 WDLR 239
WDLR
Sbjct: 251 WDLR 254
>gi|118088359|ref|XP_419667.2| PREDICTED: nucleoporin Nup43 [Gallus gallus]
Length = 374
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 77/197 (39%), Gaps = 36/197 (18%)
Query: 109 ENSGFHV--------GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGF 160
EN+ +H +GV E V+VGEDGR+NL + R D
Sbjct: 116 ENAHYHADQYTACGGAACTGVICNNPEIVTVGEDGRINLYRA-DQKDAVRTIDNADSSTL 174
Query: 161 NCVKWASPTEFVTGGFGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPS 219
+ V + TE +T L+ WD R+ + + G+ +H VD HP+
Sbjct: 175 HAVTFLRTTEILTVNSIGQLKIWDFRQQRNEPAQIFSLTGD-------RVPLHCVDRHPN 227
Query: 220 RKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNI 279
++H GG G + WD+R GT + E+E+WEV H SN
Sbjct: 228 QQHIVATGGQDGMLSIWDIR----------QGTMPVSLLNAHEAEMWEV----HFHPSNP 273
Query: 280 SSSRVLPAMFCSEDGIL 296
CSEDG L
Sbjct: 274 DH-----LFTCSEDGSL 285
>gi|307214383|gb|EFN89454.1| Nucleoporin Nup43 [Harpegnathos saltator]
Length = 344
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 32/239 (13%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTP 70
Q F ++K+ W P++ ++ YD + PS P L+ +S
Sbjct: 20 QHEDFTEAKHFLTGSWDNPVNKITYWTFKTNYD---EEPS--------PIVLSSYSFLGD 68
Query: 71 PTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTG----- 125
T + +S VA+S+L GS+ +L V E+ + D
Sbjct: 69 VTELKFISKDF--FVASSSL-GSVRLLQINEDVYTEFKEHMAWEFIHYFKTDYASCTALS 125
Query: 126 ---SECVSVGEDGRVNLVSVIGGGEFK--RVYDGNGLVGFNCVKWASPTEFVTGGFGYGL 180
+ SVGEDG++NL++ E K R+ + CV + +E +TG +
Sbjct: 126 TFEQDIASVGEDGKLNLLT---AAEKKPVRIIENADSCSIYCVDFLRHSEVLTGNSRGHM 182
Query: 181 QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ WDLR P F + + A+ + H HP+++H +AGG G++ WDLR
Sbjct: 183 KVWDLRN-DHDVPATTFMLSDQVKIGATNITH----HPTQRHIVVAGGGDGSLTVWDLR 236
>gi|260808664|ref|XP_002599127.1| hypothetical protein BRAFLDRAFT_281490 [Branchiostoma floridae]
gi|229284403|gb|EEN55139.1| hypothetical protein BRAFLDRAFT_281490 [Branchiostoma floridae]
Length = 383
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 117 PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGF 176
P +G+ T + V+VGEDGR+N+V V + + D + N V + E +T
Sbjct: 134 PCTGLAATLPDIVTVGEDGRINVVRVDHRAPIRTIDDADSCT-LNAVSLKA-FEVITVNS 191
Query: 177 GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAW 236
L+ +DLRR S + F G+ + H +D HP + H GG G+++ W
Sbjct: 192 SGQLKVFDLRRPSSEPTRI-----FLLSGERIPL-HCLDKHPGQPHIVATGGQDGSLYMW 245
Query: 237 DLRWQQQSI 245
DLR ++ +
Sbjct: 246 DLRQERHPV 254
>gi|195569911|ref|XP_002102952.1| GD19227 [Drosophila simulans]
gi|194198879|gb|EDX12455.1| GD19227 [Drosophila simulans]
Length = 358
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + G++ + GEDG V++VSV + KR + + + F+ + + S E VT
Sbjct: 130 APCTDLSTYGTDIATAGEDGCVSIVSVENVRQVKRQIEADSMALFS-ICYISQQELVTAN 188
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ D R A P F SQ S + S+ HP + H L G G++
Sbjct: 189 RMGVIRVLDGRVATEAQPKTTFM--VASQDDKSNFVSSLAKHPMQHHILLCGSEEGSITV 246
Query: 236 WDLR 239
WD+R
Sbjct: 247 WDMR 250
>gi|332019513|gb|EGI59992.1| Nucleoporin Nup43 [Acromyrmex echinatior]
Length = 344
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 127 ECVSVGEDGRVNLVSVIGGGEFK--RVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWD 184
+ SVGEDG++NL++ E K R+ + CV + E +TG ++ WD
Sbjct: 130 DIASVGEDGKLNLLT---AAEKKPVRIIENADSCSIYCVDFLKHNEVLTGNSRGHMKVWD 186
Query: 185 LRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
LR P F + + A+ + H HP+++H +AGG G++ WDLR
Sbjct: 187 LRN-DRDMPATTFMLSDQVKTAATSITH----HPTQRHIVVAGGDDGSLTVWDLR 236
>gi|281212106|gb|EFA86267.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
Length = 369
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 33/198 (16%)
Query: 112 GFHVGPISGVDLT--GSECVSVGEDGRVNLVSV---IGGGEFKRVYDGNGLVGFNCVKWA 166
H G I+ +D T V+VG DG +N++S+ I K++ DG + + V++
Sbjct: 145 NLHKGGITAIDTTYDNEHIVTVGNDGVLNVLSIDSPIPIYTNKKI-DG---LSVHTVRYM 200
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
+ E +T G L++WD+R + + P+ + Q + HS+ +H + H
Sbjct: 201 TNNEIITSGVNSVLKFWDIR-SSTHQPIKTIRQ---VQQTQTSPTHSIAVHHDQTHIIAT 256
Query: 227 GGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLP 286
G + G V +D R + + H +S VWEV++ S S+
Sbjct: 257 GNADGYVSLFDFR--------NSFAIDQNQNH---KSHVWEVEF---------SKSKSNQ 296
Query: 287 AMFCSEDGILAVVEQGEE 304
CS+DG + + + +
Sbjct: 297 LFSCSQDGSVYLYDYNRD 314
>gi|195343300|ref|XP_002038236.1| GM17865 [Drosophila sechellia]
gi|194133086|gb|EDW54654.1| GM17865 [Drosophila sechellia]
Length = 358
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + G++ + GEDG V++VSV + KR + + + F+ + + S E VT
Sbjct: 130 APCTDLSTYGTDIATAGEDGCVSIVSVENVRQVKRQIEADSMALFS-ICYISQQELVTAN 188
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ D R A P F S+ S + S+ HP ++H L G G++
Sbjct: 189 RMGVIRVLDGRVATEAQPKATFM--VASRDDKSNFVSSLAKHPMQQHILLCGSEEGSITV 246
Query: 236 WDLR 239
WD+R
Sbjct: 247 WDMR 250
>gi|432946572|ref|XP_004083832.1| PREDICTED: nucleoporin Nup43-like [Oryzias latipes]
Length = 372
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + + + E V+VGEDGR+ + G RV + + V + TE +T
Sbjct: 126 APCTALVCSSPEIVTVGEDGRIVVFRADQEGAV-RVIENADSSTIHAVTYLKTTEVLTVN 184
Query: 176 FGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WDLR+ S +L G+ +H VD HP+++H GG G +
Sbjct: 185 SIGQLKLWDLRQQSSSPSQILSLSGDRAP-------LHCVDRHPNQQHIVATGGQDGMLC 237
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R I L HS +E+WEV++ H + + CSEDG
Sbjct: 238 VWDVRQGGTPISL-------MEAHS---AEMWEVRF--HPTNPD-------HLFTCSEDG 278
Query: 295 IL 296
L
Sbjct: 279 SL 280
>gi|225715908|gb|ACO13800.1| Nucleoporin Nup43 [Esox lucius]
Length = 372
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+ L G + + + + + V + TE +T
Sbjct: 126 APCTGVVCNSPEIVTVGEDGRIILFRSDQEGVTRTIENADSST-IHAVTFLRTTEILTVN 184
Query: 176 FGYGLQWWDLR-RAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R R+ +L G+ +H VD HP+++H GG G +
Sbjct: 185 SIGQLKLWDFRQRSNEPSQILSLTGDRVP-------LHCVDRHPNQQHIVATGGQDGMLC 237
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R + L HS +E+WEV + S CSEDG
Sbjct: 238 IWDVRQGKMPFSL-------MEAHS---AEMWEVHFHPSNPDHLFS---------CSEDG 278
Query: 295 IL 296
L
Sbjct: 279 SL 280
>gi|91092542|ref|XP_968010.1| PREDICTED: similar to nucleoporin Nup43 [Tribolium castaneum]
gi|270006621|gb|EFA03069.1| hypothetical protein TcasGA2_TC010925 [Tribolium castaneum]
Length = 349
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 144/360 (40%), Gaps = 49/360 (13%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSL-ETHSISLPASLTPH--SQ 67
+H S+ ++ +RW P S V +D D +S L + A + P ++
Sbjct: 4 NIHGTFVSEKVNKIRWRPDFMNASHYFVTGSWDNDQNSIKLWDFQENEEDAEVYPFLVAE 63
Query: 68 WTPPTRISSLSTSHQSLVAASTLSGSLHVLS-SAMQVLLSVDENSGFHVG---------- 116
+ I+ + + AS+ SG + +L ++ + + E + G
Sbjct: 64 FPHNGDITEVKFLNGDFFVASSSSGCVSLLKITSEHGIDPLIERKIYWEGVHKFPNGENC 123
Query: 117 PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGF 176
P + ++ VSVGEDG +NL++ + + + + CV + +E +TG F
Sbjct: 124 PCTAFCTYDNDIVSVGEDGSINLLNAQNQNVIRTIENADS-CSIRCVAFLKHSEILTGNF 182
Query: 177 GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAW 236
L+ +D+R P Q F G + + HP+++H +AG G++ W
Sbjct: 183 RGQLKIFDIR-----APKSQPATTFMLSGDQISPL-CLQNHPTQRHLVVAGDEEGSITIW 236
Query: 237 DLRWQQQSI-VLSGVGTGEAVTH-----------SLSESEVWEVQYDCHTKSSNISSSRV 284
DLR + VL G H ++ +VW C + SS ++ V
Sbjct: 237 DLRQNTYPVNVLDAHEGGVMEIHFHPDHPDQLFTCSTDGDVWHWSPKCGSASSLLNGENV 296
Query: 285 LPAMFCSEDGILAVVEQGEEPFEL---LAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341
A ++ + F L L +P INS D+ N + V+C + E++ +++
Sbjct: 297 WLAS--------EAIKNKLDVFTLMPKLHKP--INSLDV---NRNKVLCGCDNEAVYLIN 343
>gi|74194204|dbj|BAE24655.1| unnamed protein product [Mus musculus]
Length = 282
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGY 178
+G+ E V+VGEDGR+NL V E R D + V + E VT
Sbjct: 135 TGIVCDNPEIVTVGEDGRINLFRV-DHKEAVRTIDNADSNTLHAVTFLRTPEIVTVNSIG 193
Query: 179 GLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
L+ WD R+ GS +L G+ +H VD HP ++H GG G + WD
Sbjct: 194 QLKIWDFRQQGSEPCQILSLTGD-------RVPLHCVDRHPDQQHVVATGGQDGMLSIWD 246
Query: 238 LR 239
+R
Sbjct: 247 VR 248
>gi|225707502|gb|ACO09597.1| Nucleoporin Nup43 [Osmerus mordax]
Length = 372
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 75/182 (41%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +GV E V+VGEDGR+ ++ E R + + V + TE +T
Sbjct: 126 APCTGVVCNSPEIVTVGEDGRI-VIFRADQEEVIRTIENADSSTIHAVTFLRTTEILTVN 184
Query: 176 FGYGLQWWDLRR-AGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WDLR+ A +L G+ +H VD HP+++H GG G +
Sbjct: 185 SIGQLKLWDLRQQANEPSQILSLTGDRVP-------LHCVDRHPNQQHIVATGGQDGMLC 237
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R Q ++ S + A E+WEV + S CSEDG
Sbjct: 238 IWDVR--QGNMPFSLMDAHSA--------EMWEVHFHPSNPDHLFS---------CSEDG 278
Query: 295 IL 296
L
Sbjct: 279 SL 280
>gi|387915614|gb|AFK11416.1| nucleoporin Nup43 [Callorhinchus milii]
Length = 374
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P +G+ GSE ++VGEDGR+N + R D + V + E +T
Sbjct: 126 APCTGLVCNGSEIITVGEDGRINHFRA-DQKDPVRTIDNADSSTLHAVTFLRINEILTVN 184
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
L+ WD R+ G+ + F G + H VD HP+++H GG G +
Sbjct: 185 SIGQLKIWDFRQPGNEASRI-----FSLTGDRVPL-HCVDRHPNQQHIVATGGQDGMLCI 238
Query: 236 WDLR 239
WD+R
Sbjct: 239 WDVR 242
>gi|307170456|gb|EFN62726.1| Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
[Camponotus floridanus]
Length = 1037
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 127 ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLR 186
+ SVGEDG++NL++ I R+ + C+ + E +TG ++ WDLR
Sbjct: 130 DIASVGEDGKLNLLTAIEKKPV-RIIENADSCSIYCIDFLKHNEVLTGNSRGHMKVWDLR 188
Query: 187 RAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
P F + + A+ + H HP+++H +AGG G++ WDLR
Sbjct: 189 N-DRDMPASTFMLSDQVKTAATSITH----HPTQRHIVVAGGDDGSLTVWDLR 236
>gi|348517550|ref|XP_003446296.1| PREDICTED: nucleoporin Nup43-like [Oreochromis niloticus]
Length = 372
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P + V + E V+VGEDGR+ + G RV + + V + TE +T
Sbjct: 126 APCTSVVCSSPEIVTVGEDGRIIVFRADQEG-VVRVIENADSSTIHAVTYLRTTEILTVN 184
Query: 176 FGYGLQWWDLRR-AGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
L+ WD R+ + S +L G+ +H VD HP+++H GG G +
Sbjct: 185 SIGQLKLWDFRQQSNSPSQILSLSGDRVP-------LHCVDRHPNQQHIVATGGQDGMLC 237
Query: 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
WD+R L T +E+WEV + H + + CSEDG
Sbjct: 238 VWDVRQGNTPFSLMEAHT----------AEMWEVHF--HPTNPD-------HLFTCSEDG 278
Query: 295 IL 296
L
Sbjct: 279 SL 280
>gi|440799742|gb|ELR20786.1| nucleoporin, putative [Acanthamoeba castellanii str. Neff]
Length = 360
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 130/355 (36%), Gaps = 85/355 (23%)
Query: 21 IDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLP-----ASLTPHSQWTPP---- 71
I+ VRWLP + + + A + + + ++LP + P +
Sbjct: 16 INKVRWLPRYDQIGRASFFATGTWEEEVNKVTLWQLNLPEGDDKGADAPFECYESTHHGG 75
Query: 72 -TRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLS--VDEN-----------SGFHVGP 117
T + ++ ++Q V ++ GS + L Q L + VDE S H
Sbjct: 76 VTDLKAVEANNQVYVLTTSTKGS-YSLYQVPQDLFTGDVDEGQVASLPRELLASNLHTSA 134
Query: 118 ISGVDLTG--SECVSVGEDGRVNLVSVIGGG---EFKRVYDGNGLVGFNCVKWASPTEFV 172
+ +D + E V+VGEDG +N + + F R F V++ + T +
Sbjct: 135 ATAIDYSPELQEVVTVGEDGTINNLQLTATKPHVSFVRAES----CAFTSVQYMTQTTIL 190
Query: 173 TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT 232
T L+ WDLR + Q K G+I S HP + H S+G+
Sbjct: 191 TTASNNTLKIWDLR---AKSVFKQLKDT-----AKEGIITSATRHPFQIHRLTTAYSNGS 242
Query: 233 VFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSE 292
+ WDLR + L H+ S VWEVQ+ T N+ + CSE
Sbjct: 243 IAMWDLRQNAPFMHLDK--------HT---SHVWEVQHHA-TAPDNLFT--------CSE 282
Query: 293 DGIL------------------------AVVEQGEEPFELLAEPCAINSFDIDPQ 323
DG L + E G ++ + INSF ++P+
Sbjct: 283 DGFLFHWDVKAIQQVSGRGASQLVANDEVIEEVGNSRRVVVTDKLGINSFHVNPE 337
>gi|193631903|ref|XP_001950211.1| PREDICTED: nucleoporin Nup43-like [Acyrthosiphon pisum]
Length = 357
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 103/262 (39%), Gaps = 41/262 (15%)
Query: 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDAD--------SPSLETHSISLPASLTPHSQWTP 70
+ ++ VRW P S + V +D + D + E + P L Q
Sbjct: 13 RKVNRVRWKPDDLMASTMFVTGSWDNEDDNVIELWGLTSEDENSAKDFPPKLLDSVQ--Q 70
Query: 71 PTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDL-----TG 125
++ + VA ST +G++ V ++ +E+S H+ + D G
Sbjct: 71 NGNVTQIRFLDNKFVAVSTDNGTVKVYR-----VIGENEDSNIHLEEVMAWDNLHSLGKG 125
Query: 126 SEC------------VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT 173
C ++G+D ++N++S + + +V +G C+ + + TE +
Sbjct: 126 QRCSCKDLAVCNFSLATIGDDYKLNVIS-LNTKQIHQVLEGISSSPLTCICFLTDTEVLC 184
Query: 174 GGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTV 233
++ WDLR A S N + + I V HPS+KH G G V
Sbjct: 185 CNALSQMKLWDLRVAKSS-----ITANINNFTQTQVPITCVAQHPSQKHFIFTGSEEGDV 239
Query: 234 FAWDLRWQQQSIVLSGVGTGEA 255
WD+R + +L+ + +G+A
Sbjct: 240 GVWDMR---TNSLLTTMNSGDA 258
>gi|307107011|gb|EFN55255.1| hypothetical protein CHLNCDRAFT_134589 [Chlorella variabilis]
Length = 416
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 14/125 (11%)
Query: 127 ECVSVGEDGRVNLVSVIGGG--EFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWD 184
E +S G DG + L + G R+Y G V F +W P VTG + WD
Sbjct: 167 ELLSAGADGSLALAPLEAGDGTAGSRLYGSAGAVTFAAARWNGPHTAVTGSLQGLVHVWD 226
Query: 185 LRRAGSGGPVLQF----------KGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234
R+AG P LQ G + I +D+HP++ C GG G V
Sbjct: 227 ARQAGR--PALQLLQPAAGSAAAAGAGLGLAAPAPAITCLDVHPAQHFCCATGGDDGGVA 284
Query: 235 AWDLR 239
WDLR
Sbjct: 285 VWDLR 289
>gi|198451893|ref|XP_001358548.2| GA20514 [Drosophila pseudoobscura pseudoobscura]
gi|198131691|gb|EAL27689.2| GA20514 [Drosophila pseudoobscura pseudoobscura]
Length = 356
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 29/252 (11%)
Query: 10 PQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWT 69
P V S+ I AVRWLP S V +D D + L + + + +
Sbjct: 4 PTVSSHFVSEKISAVRWLPEQLMQSDRFVTGSWDMDQNFVRL--YRLQSNQYADTNVDFV 61
Query: 70 PPTR--------ISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDE------NSGFHV 115
P ++++ + ++ +A S G L +L+ MQ + D+ + H
Sbjct: 62 PRCNDKVAIEGDVTAMEFADKNTLAVSCADGHLSLLN--MQRAVEEDQLQRTARSERLHY 119
Query: 116 -------GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASP 168
P + + + G + +VGEDG VN+++ + KR + + + V + S
Sbjct: 120 FKRTNKSSPCTDLSVYGGDIATVGEDGCVNIMNASNIKQVKRTIEADSM-SLLSVCYISQ 178
Query: 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQG-KASGMIHSVDIHPSRKHTCLAG 227
+ VT ++ D R + + + GS+ K S + ++ HP + H L G
Sbjct: 179 QQLVTANRMGVIRILDARASTAAQEKISIM--VGSKDEKRSNFVSALGTHPMQHHILLCG 236
Query: 228 GSSGTVFAWDLR 239
GT+ WDLR
Sbjct: 237 TEEGTITVWDLR 248
>gi|321469675|gb|EFX80654.1| hypothetical protein DAPPUDRAFT_303847 [Daphnia pulex]
Length = 343
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 30/246 (12%)
Query: 18 SKYIDAVRWLPPLS---PLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRI 74
SK I VRW P + P + V +D E + +SL +++P Q P ++
Sbjct: 11 SKKIRKVRWQRPAAFGRPNPEYFVAGSWDD-------EQNEVSLWNTVSPDEQNNDPIQV 63
Query: 75 SSLS-TSHQSLVAASTLSGSLHVLSSAMQVLLSVDEN-------SGFH-----VGPISGV 121
S++ TS + ++ S L + +++ +D+ H P +G+
Sbjct: 64 STIPVTSDVNDISFYDTSNFFVALGNGTIMMVRIDKKLEVVHQWKDIHHFKSAKAPATGI 123
Query: 122 DLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQ 181
E S+GEDG++NL+ + +K + D + N + S E TG ++
Sbjct: 124 VCQSPEIASIGEDGKLNLMRINQDKPYKTI-DADS-CSLNAAVFTSQNEIFTGNSRGMIK 181
Query: 182 WWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQ 241
WDL R+ + PV S+ S M + +P + H GG G + +D+R
Sbjct: 182 LWDL-RSTTEKPVQSTSLAEDSEVGVSSM----ERNPFQGHIVAVGGYDGMLTVYDMRKA 236
Query: 242 QQSIVL 247
Q + +
Sbjct: 237 QTPVTV 242
>gi|66816027|ref|XP_642030.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
gi|74997239|sp|Q54Z22.1|NUP43_DICDI RecName: Full=Nuclear pore complex protein nup43; AltName:
Full=Nucleoporin nup43
gi|60470170|gb|EAL68150.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
Length = 417
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 129 VSVGEDGRVNLVSV--IGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG-FGYGLQWWDL 185
V+VG DG +NL+S+ + R DG + N VK + + +T G G +++WD+
Sbjct: 206 VTVGNDGVMNLLSIENLIPIYTNRYIDG---LSVNVVKSITSNQIITSGELGRYIKFWDI 262
Query: 186 RRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSI 245
R + S PV K I S+ IH +H AG S G V +D+R
Sbjct: 263 R-SNSSQPVKTIK-------TQCPRIFSLAIHKDEQHIIAAGSSDGQVNLFDIR------ 308
Query: 246 VLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP 305
+ + TH+ S VWE+ + S S CSEDG + ++
Sbjct: 309 --NDYSIDQNKTHN---SNVWELSF---------SKSNPNQLYSCSEDGFIYQYSYNKDN 354
Query: 306 F---ELLAEPCAI-NSFDI 320
++ P I N+FDI
Sbjct: 355 LGGGGMMTLPNQINNTFDI 373
>gi|195145661|ref|XP_002013810.1| GL24341 [Drosophila persimilis]
gi|194102753|gb|EDW24796.1| GL24341 [Drosophila persimilis]
Length = 356
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 29/252 (11%)
Query: 10 PQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWT 69
P V S+ I +VRWLP S V +D D + L + + + +
Sbjct: 4 PTVSSHFVSEKISSVRWLPEQLQQSDRFVTGSWDMDQNFVRL--YRLQSNQYADTNVDFV 61
Query: 70 PPTR--------ISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDE------NSGFHV 115
P ++++ + ++ +A S G L +L+ MQ + D+ + H
Sbjct: 62 PRCNDKVAIEGDVTAMEFADKNTLAVSCADGHLSLLN--MQRAVEEDQLQRTARSERLHY 119
Query: 116 -------GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASP 168
P + + + G + +VGEDG VN+++ + KR + + + V + S
Sbjct: 120 FKRTNKSSPCTDLSVYGGDIATVGEDGCVNIMNASNIKQVKRTIEADSM-SLLSVCYISQ 178
Query: 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQG-KASGMIHSVDIHPSRKHTCLAG 227
+ VT ++ D R + + + GS+ K+S + ++ HP + H L G
Sbjct: 179 QQLVTANRMGVIRILDARASTAAQEKISIM--VGSKDEKSSNYVSALGTHPMQHHILLCG 236
Query: 228 GSSGTVFAWDLR 239
GT+ WDLR
Sbjct: 237 TEEGTITVWDLR 248
>gi|322796692|gb|EFZ19125.1| hypothetical protein SINV_01104 [Solenopsis invicta]
Length = 1038
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 33/240 (13%)
Query: 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTP 70
Q F ++K W P++ ++ YD + S P L+ +S
Sbjct: 20 QYENFTEAKNFLTGSWDNPINKITYWTFKTNYDEE-----------SYPVVLSSYSFLGD 68
Query: 71 PTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHV---------GPISGV 121
T + +S VAAS+L GS+ +L E+ + + +
Sbjct: 69 VTELKFISKDF--FVAASSL-GSIRLLQIDEDTCTEFKEHMSWEFIHNFKTTDYASCTAL 125
Query: 122 DLTGSECVSVGEDGRVNLVSVIGGGEFK--RVYDGNGLVGFNCVKWASPTEFVTGGFGYG 179
+ SVGEDG++NL++ E K RV + C + E +TG
Sbjct: 126 STFEQDIASVGEDGKLNLLT---AAEKKPVRVIENADSCSIYCADFLKHNEVLTGNSRGH 182
Query: 180 LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
++ WDLR P F + + + + H HP+++H +AGG G++ WDLR
Sbjct: 183 MKVWDLRN-DRDVPATTFMLSDQIKTATTSITH----HPTQRHIVVAGGEDGSLTVWDLR 237
>gi|221112695|ref|XP_002158371.1| PREDICTED: nucleoporin Nup43-like [Hydra magnipapillata]
Length = 355
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 45 DADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSS--AMQ 102
+ + P+LE+ + + S+T +P I S S S+V+ S+ + S +
Sbjct: 54 NDNEPNLESQLV-VEGSVTDLLVMSPGKVIYSNSNGDVSIVSLSSHDNKMREDQSWKKLH 112
Query: 103 VLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNC 162
LS +E V + + G + V+ GEDG++N + + + RV +
Sbjct: 113 RYLSTNE-----VACCTCLASYGQDIVTGGEDGKINFL-LPERKKPIRVLENADSSNVTG 166
Query: 163 VKWASPTEFVTGGFGYGLQWWDLRRAGSGGP--VLQFKGNFGSQGKASGMIHSVDIHPSR 220
+++ S TE V+ L+ WD+R+ P VL GN + + SVD HP++
Sbjct: 167 LQFLSSTELVSINSTGQLKLWDIRQQKLNKPEKVLTLSGN-------ACPLLSVDKHPNQ 219
Query: 221 KHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQY 270
H + G G V WD+R + + L E+EVW V +
Sbjct: 220 PHIVVTGHGDGVVGIWDIRQENGPVTLVDA----------HEAEVWTVMF 259
>gi|405967575|gb|EKC32721.1| Nucleoporin Nup43 [Crassostrea gigas]
Length = 380
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 112 GFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEF 171
G H+ P + + + V+ GEDG++ ++S +R+ + N + + TE
Sbjct: 126 GNHLCPCTCLAVRDKTIVTAGEDGKMVVLSAEQKSP-QRIIENADSSTINGLVFLRHTEV 184
Query: 172 VTGGFGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS 230
++ L+ +DLR + L G S +HSVD HP + H G
Sbjct: 185 ISVNSSGQLKTYDLRSSSDAPAQTLSVSGELTS-------LHSVDRHPGQPHIVATGSGD 237
Query: 231 GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFC 290
G + WDLR ++ + L +G VWEV++ H +S+ C
Sbjct: 238 GVLGIWDLRQEKSPVSLLEAHSG----------PVWEVKF--HKTNSD-------HLFTC 278
Query: 291 SEDG 294
SEDG
Sbjct: 279 SEDG 282
>gi|290561511|gb|ADD38156.1| Nucleoporin Nup43 [Lepeophtheirus salmonis]
Length = 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 26/244 (10%)
Query: 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLET----------HSISLPASLTPHSQW 68
K I+ +RW P S L + + D PS E S SLPASL PHS
Sbjct: 26 KKINCIRWKPRKDTSSLDGNLFVTGSWDDGPSNEVALWKVNEGEGESASLPASL-PHS-- 82
Query: 69 TPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPI-----SGVDL 123
I++L + + G +H+ Q L ++ +G H G + V
Sbjct: 83 ---GDINALEFLNSETFVTGSSDGCVHLFRIHNQDLSLLNSWNGLHTGCYRASGSNSVSC 139
Query: 124 TGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWW 183
+G S GE+G+V +++ K Y+ + V + E +T ++ W
Sbjct: 140 SGEIFASAGEEGKVVVINARTKQSIK-TYEQADSCSLSAVHFVKHDEILTANMRGQMKLW 198
Query: 184 DLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ 243
DLR + + P F + Q I V HP++ H G G + WD R ++
Sbjct: 199 DLRSSETSSPSTTFFSSNTDQVG----ITCVSRHPTQSHVICTGAQDGKIAFWDFRKERY 254
Query: 244 SIVL 247
+ +
Sbjct: 255 PVTI 258
>gi|330802381|ref|XP_003289196.1| hypothetical protein DICPUDRAFT_35300 [Dictyostelium purpureum]
gi|325080724|gb|EGC34267.1| hypothetical protein DICPUDRAFT_35300 [Dictyostelium purpureum]
Length = 359
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 33/172 (19%)
Query: 149 KRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKAS 208
R DG +G N VK S ++ +T G +++WD R A S P K S
Sbjct: 177 NRYIDG---LGVNVVKSISNSQVITSGENPIIKFWDFR-ANSTTPTKIIK-------TQS 225
Query: 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEV 268
I+S+++H ++H AGGS G V +D+R I + H+ S+VWE+
Sbjct: 226 PRINSLEVHQDQQHIIAAGGSDGRVTLFDIRSGDYPI-------DQNKNHN---SDVWEL 275
Query: 269 QYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDI 320
+ N S+ L + CSEDG + + F + N+FD+
Sbjct: 276 SF-------NKSNPNQLYS--CSEDGSIYQYSYSNDNFMRADDD---NTFDL 315
>gi|391343934|ref|XP_003746260.1| PREDICTED: nucleoporin Nup43-like [Metaseiulus occidentalis]
Length = 357
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 12/152 (7%)
Query: 125 GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWD 184
G+E V+VGEDG + + + +G CV + E G LQ +D
Sbjct: 113 GAEVVTVGEDGFIKRFILKDPKDTPAQSIESGADSLTCVAYLGQNEVAVGNLAGRLQIFD 172
Query: 185 LRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQS 244
L ++ + + Q G I + HPS+ H G +G++ WDLR + Q
Sbjct: 173 LNKSQ------EVRACLLRQDDLVG-ITCILQHPSQPHLVFCGTEAGSICVWDLRQEDQP 225
Query: 245 -----IVLSGVGTGEAVTHSLSESEVWEVQYD 271
V E H+LS S + V YD
Sbjct: 226 NPSAFYNCHTVLIPELRFHALSTSHLISVCYD 257
>gi|301101640|ref|XP_002899908.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102483|gb|EEY60535.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 443
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 80 SHQSLVAASTLSGSLHVLSSAMQVLLSVDE---NSGFHVGPISGVDLTGSECVSVGEDGR 136
+H L++ SG L L+ + ++L + E NS H I G+D+ ++ +D
Sbjct: 188 AHIPLMSFKAHSGWLWDLNHSSEMLKTPKEIFSNSSLHTKGIFGMDVCDDSVLTCSKDTS 247
Query: 137 VNLVSVIGGG---EFKRVYDGNGLVGFNCVKWA--SPTEFVTGGFGYGLQWWDLRRAGSG 191
+ L G E K+ +D + V CV++A +P F +GG L +D R A +
Sbjct: 248 IALSQFRGDTGLLEVKQRFDDHAGV-VKCVRFAKCNPQIFASGGNDRELHVFDTRVAAN- 305
Query: 192 GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
P + G G S I+SV HP+ + L+ G F +DLR
Sbjct: 306 -PSVVTVG-----GMHSRAINSVQFHPTDDNLLLSAGFDSNFFMFDLR 347
>gi|313231897|emb|CBY09009.1| unnamed protein product [Oikopleura dioica]
Length = 576
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 15/128 (11%)
Query: 115 VGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASP-TEFVT 173
V I LTG +S DG+V + G R Y G+ G C+ + +F++
Sbjct: 287 VTSIEQFPLTGHLILSSSMDGKVKIWETYGKRRLLRTYCGHN-KGVRCLDFTHDGKKFMS 345
Query: 174 GGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS--RKHTCLAGGSSG 231
G + ++ WD +G + +F M + + IHP+ R+H L G +
Sbjct: 346 GAYDRMMKLWDTE---TGQAIQKFSN--------KKMPYVIRIHPNPERQHMFLVGSNDK 394
Query: 232 TVFAWDLR 239
V AWD R
Sbjct: 395 KVSAWDCR 402
>gi|409074408|gb|EKM74807.1| hypothetical protein AGABI1DRAFT_132849 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1048
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 40/167 (23%)
Query: 108 DENSGFHVGP-----ISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRV----------- 151
D + H GP ++ V L G +S GEDGR+ + G E R+
Sbjct: 12 DSRTHPHPGPSRNARLAKVTLPGGGLISKGEDGRI----AVAGRESLRILRISDTSRKIE 67
Query: 152 -----YDGNGLVGFNC----VKWAS---PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKG 199
+DG+GL +C V WA + +T L WDL R+G + K
Sbjct: 68 SSRNLWDGSGL-KIDCASTDVAWAYGAFNNKILTSARNGELIVWDLNRSGHSKYERKTKE 126
Query: 200 NFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246
+ S IH++ + H C+ G + WDLR Q S++
Sbjct: 127 HLRS-------IHALSVSRVAHHYCITGSADADFRIWDLRDTQSSVM 166
>gi|426194953|gb|EKV44883.1| hypothetical protein AGABI2DRAFT_186810 [Agaricus bisporus var.
bisporus H97]
Length = 1138
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 40/167 (23%)
Query: 108 DENSGFHVGP-----ISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRV----------- 151
D + H GP ++ V L G +S GEDGR+ + G E R+
Sbjct: 12 DSRTHPHPGPSRNARLAKVTLPGGGLISKGEDGRI----AVAGRESLRILRISDTSRKIE 67
Query: 152 -----YDGNGLVGFNC----VKWAS---PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKG 199
+DG+GL +C V WA + +T L WDL R+G + K
Sbjct: 68 SSRNLWDGSGL-KIDCASTDVAWAYGAFNNKILTSARNGELIVWDLNRSGHSKYERKTKE 126
Query: 200 NFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246
+ S IH++ + H C+ G + WDLR Q S++
Sbjct: 127 HLRS-------IHALSVSRVAHHYCITGSADADFRIWDLRDTQSSVM 166
>gi|328767770|gb|EGF77818.1| hypothetical protein BATDEDRAFT_37327 [Batrachochytrium
dendrobatidis JAM81]
Length = 379
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 89/237 (37%), Gaps = 56/237 (23%)
Query: 79 TSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPIS----------------GVD 122
T + S++ ST G LH+ +D F + P+S +D
Sbjct: 108 TQNGSMLVTSTEDGYLHIFR--------IDSRDEFKLIPMSETQAHTRHASYLAGCTALD 159
Query: 123 LT---GSEC--VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG 177
++ G C SVG DG+V ++ G + V+W +P + VT
Sbjct: 160 ISRSGGDHCQIASVGSDGQVVFSTI--DGRIQHTIAKVDSQTLTNVQWRTPFQVVTTSLS 217
Query: 178 YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237
+ D R + P L F G HS+ +HP++ + G SG V WD
Sbjct: 218 GRICLIDQR---ADKPALVF----ADHGAVLQSHHSLAVHPTQSEMLVTGTESGIVQLWD 270
Query: 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294
LR V + E+ +S VW++Q ISS+ + CSEDG
Sbjct: 271 LR---------NVSSPESSDTKNHKSIVWDLQ---------ISSNDIGKVWSCSEDG 309
>gi|326429352|gb|EGD74922.1| hypothetical protein PTSG_07149 [Salpingoeca sp. ATCC 50818]
Length = 333
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 159 GFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDI-- 216
F C+ S T+ V G+ + L +DL + G+ + + H+ +
Sbjct: 112 AFTCMD-VSETQIVASGYDHLLHVYDLETFKPQQTLGMTTAELGAMSEEGIISHTNRVFS 170
Query: 217 ---HPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSG-VGTGEAVTHSLSESEVWEVQYDC 272
HP+ ++ L+GG TV WD R Q LSG G+A++ S +++ YD
Sbjct: 171 CLFHPTERNIVLSGGWDRTVMVWDTRQQNPVSHLSGPYIAGDAMSFDASGDKLYTASYDP 230
Query: 273 HT 274
HT
Sbjct: 231 HT 232
>gi|427782343|gb|JAA56623.1| Putative nucleoporin [Rhipicephalus pulchellus]
Length = 323
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 11/165 (6%)
Query: 84 LVAASTLSGSLHVLSSAMQVLLSVDENSGFHVG-PISGVDLTG-SECVSVGEDGRVNLVS 141
++AA+ SG + + + L S H G P + + G S+ SVGEDGR+ ++
Sbjct: 85 ILAAALSSGEVRLYRCSSSELQEQQRWSHLHPGYPCTAISARGPSKLASVGEDGRLCQLT 144
Query: 142 VIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNF 201
G E R+ +G C+ + + G LQ WDL P + +
Sbjct: 145 P-GRPEASRIIEGANSGCPTCLSYVRQEHVIVGNLAGHLQLWDL-----ASPDRRPAQDL 198
Query: 202 GSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246
G+ + + H S+ H G +SG + WDLR + + V
Sbjct: 199 TWSGQ---QVTCLAQHQSQGHLVACGAASGQLSLWDLRQTRLATV 240
>gi|390334535|ref|XP_795657.3| PREDICTED: nucleoporin Nup43-like [Strongylocentrotus purpuratus]
Length = 178
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 21/87 (24%)
Query: 211 IHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQY 270
+H VD HP++ H GG +G + WD+R +Q + L V +S VWEV++
Sbjct: 9 LHCVDRHPTQPHLVATGGQNGILNIWDMRKEQLPVTLFDV----------HQSHVWEVKF 58
Query: 271 DCHTKSSNISSSRVLPAMF-CSEDGIL 296
H S N +F CS+DG +
Sbjct: 59 --HPTSPN--------NLFTCSDDGTV 75
>gi|348676878|gb|EGZ16695.1| hypothetical protein PHYSODRAFT_498206 [Phytophthora sojae]
Length = 439
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 80 SHQSLVAASTLSGSLHVLSSAMQVLLSVDE---NSGFHVGPISGVDLTGSECVSVGEDGR 136
+H L++ SG L L+ + +L + E + H I G+D++G ++ +D
Sbjct: 187 AHIPLMSFKAHSGWLWDLNKSSDMLRTPKEVFACTNLHQKGIFGMDVSGDSVLTCSKDAT 246
Query: 137 VNLVSVIGGG---EFKRVYDGN-GLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGS 190
V L G E R ++G+ G+V C ++A+ P F +GG ++ +D+R +
Sbjct: 247 VALSKFRGDSSPLEVVRRFEGHEGVV--KCARFANVNPYVFASGGNDRSVRVFDVR-VST 303
Query: 191 GGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
V++ G +Q +A I+SV HP+ + L+ G F +DLR
Sbjct: 304 DPNVIRIDG---AQSRA---INSVQFHPTDDNLLLSAGFDPDFFMFDLR 346
>gi|146422429|ref|XP_001487153.1| hypothetical protein PGUG_00530 [Meyerozyma guilliermondii ATCC
6260]
Length = 1266
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTE-----FVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213
F + W+ P+E + G F G ++ WD++ + LQ F S SG + +
Sbjct: 65 FYAIAWSKPSEGRSKGVLAGAFENGTIELWDVQELITSK-DLQKASIFKSSAH-SGPVKT 122
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ +P ++H L+GGS+G +F WD +
Sbjct: 123 LQFNPLQEHVLLSGGSNGQIFVWDTK 148
>gi|225718562|gb|ACO15127.1| Nucleoporin Nup43 [Caligus clemensi]
Length = 369
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 121 VDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGL 180
V +G S GE+G+V +++ K Y+ + V + E VT +
Sbjct: 134 VSCSGDVFASAGEEGKVVVINARTMQSIK-TYEKVDSCSLSAVHFVKHDEIVTANMRGQM 192
Query: 181 QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240
+ WDLR + P F F S + G I V HP++ H G G + WD R
Sbjct: 193 KLWDLRSSEGSHPSSTF---FSSNTEQVG-ITCVSRHPTQSHVICTGSQDGMIAFWDFRK 248
Query: 241 QQQSIVLSGVGTG 253
++ + + G
Sbjct: 249 ERYPVTILNAHKG 261
>gi|223634663|sp|A5DB75.2|SEC31_PICGU RecName: Full=Protein transport protein SEC31
gi|190344701|gb|EDK36432.2| hypothetical protein PGUG_00530 [Meyerozyma guilliermondii ATCC
6260]
Length = 1266
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTE-----FVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213
F + W+ P+E + G F G ++ WD++ + LQ F S SG + +
Sbjct: 65 FYAIAWSKPSEGRSKGVLAGAFENGTIELWDVQELITSK-DLQKASIFKSSAH-SGPVKT 122
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ +P ++H L+GGS+G +F WD +
Sbjct: 123 LQFNPLQEHVLLSGGSNGQIFVWDTK 148
>gi|440467329|gb|ELQ36558.1| hypothetical protein OOU_Y34scaffold00654g14 [Magnaporthe oryzae
Y34]
gi|440479252|gb|ELQ60033.1| hypothetical protein OOW_P131scaffold01320g14 [Magnaporthe oryzae
P131]
Length = 283
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 21/97 (21%)
Query: 183 WDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDI-----HPSRKHTCLAGGSSGTVFAWD 237
WD+R PV+Q+ +HS DI HP+ HT L+G + G V +D
Sbjct: 139 WDIRT--QSAPVVQYN-----------EVHSDDITELNFHPADNHTLLSGSTDGLVNVYD 185
Query: 238 LR-WQQQSIVLSGVGTGEAVTHS--LSESEVWEVQYD 271
LR + +++ + G +V H+ L+ +EV+ + +D
Sbjct: 186 LRVTDEDEVIIQTLNHGASVHHAGFLNRTEVFALSHD 222
>gi|109069591|ref|XP_001086760.1| PREDICTED: nucleoporin Nup43 isoform 1 [Macaca mulatta]
Length = 377
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 67/181 (37%), Gaps = 29/181 (16%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175
P GV E V+VGE E R D F+ V + E +T
Sbjct: 132 APCVGVVCNNPEIVTVGEHDHKE----ADHKEATRTIDNADSNTFHAVTFLQTPEILTVN 187
Query: 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
L+ D R+ G+ + S +H VD HP+++H GG G
Sbjct: 188 STGQLKTLDFRQQGNE------LSHILSLTSDRVPLHCVDRHPNQQHVVATGGQDGIFSI 241
Query: 236 WDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGI 295
WD+R Q ++ +S + EA E+WEV H SN CSEDG
Sbjct: 242 WDVR--QGTMPVSLLKAREA--------EMWEV----HFHPSNPDH-----LFTCSEDGA 282
Query: 296 L 296
L
Sbjct: 283 L 283
>gi|347963903|ref|XP_310612.5| AGAP000480-PA [Anopheles gambiae str. PEST]
gi|333466981|gb|EAA06600.5| AGAP000480-PA [Anopheles gambiae str. PEST]
Length = 347
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 89/236 (37%), Gaps = 24/236 (10%)
Query: 24 VRWLPPLSPLSKLAVLAIYDTDADSPSL---------ETHSISLPASLTPHSQWTPPTRI 74
VRWLP + V + ++ L + +P P +++ I
Sbjct: 23 VRWLPNQTEDEHFFVTGSWGERVNTVRLWNLVHDRLTDEDDTGVPLVPQPTAKFGVTGDI 82
Query: 75 SSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPI----------SGVDLT 124
L +AA T G+L VL + LS D +++ + +GV
Sbjct: 83 VGLEFLDDKHLAAVTSEGTLSVLDLNRESRLSYDFTHTYNLHDLHTNGGVRSACTGVSAF 142
Query: 125 GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYG-LQWW 183
V+ GEDG VN+V+ G + + D +G CV + P + V G YG + +
Sbjct: 143 DQYLVTGGEDGTVNMVAGDAGKVIRTIRDPDG-GAVQCVSFIYP-DLVIVGQQYGVIDCY 200
Query: 184 DLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
D R S PV + + + ++ P K G SGT+ WD+R
Sbjct: 201 DTRDE-SSKPVFSVETCV-EEDRDLNKPTCINHFPKNKQVVAIGLESGTIILWDIR 254
>gi|389637296|ref|XP_003716286.1| hypothetical protein MGG_03611 [Magnaporthe oryzae 70-15]
gi|351642105|gb|EHA49967.1| hypothetical protein MGG_03611 [Magnaporthe oryzae 70-15]
Length = 340
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 21/97 (21%)
Query: 183 WDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDI-----HPSRKHTCLAGGSSGTVFAWD 237
WD+R PV+Q+ +HS DI HP+ HT L+G + G V +D
Sbjct: 139 WDIRT--QSAPVVQYN-----------EVHSDDITELNFHPADNHTLLSGSTDGLVNVYD 185
Query: 238 LR-WQQQSIVLSGVGTGEAVTHS--LSESEVWEVQYD 271
LR + +++ + G +V H+ L+ +EV+ + +D
Sbjct: 186 LRVTDEDEVIIQTLNHGASVHHAGFLNRTEVFALSHD 222
>gi|328698551|ref|XP_003240669.1| PREDICTED: nucleoporin Nup43-like [Acyrthosiphon pisum]
Length = 355
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 93/246 (37%), Gaps = 39/246 (15%)
Query: 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDAD--------SPSLETHSISLPASLTPH-SQWT 69
+ ++ VRW P S + V +D + D + E + P L Q
Sbjct: 13 RKVNRVRWRPDDLMASTMFVTGSWDNEYDNVIELWGLTSEDENSAKDFPPKLLDCVKQNG 72
Query: 70 PPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDL------ 123
T+I L + VA ST +G++ V ++ +E+S H+ I D
Sbjct: 73 NVTQIRFLDSK---FVAVSTDNGAVKVYR-----VIGENEDSNIHLKEIMAWDTLHSLGK 124
Query: 124 TGSEC----------VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT 173
S C ++G+D ++N++S + + V + C+ + + TE +
Sbjct: 125 EQSSCKDLAVCNFSLATIGDDYKLNIIS-LNTKQIHLVLEVISSSPLTCICFLTDTEVLC 183
Query: 174 GGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTV 233
++ D+R A S N + + I V HPS+KH G G V
Sbjct: 184 CNALSQMELCDIRVAKSS-----IMANINNFSQTQVPITCVAQHPSQKHFIFTGSDEGDV 238
Query: 234 FAWDLR 239
WD+R
Sbjct: 239 GVWDMR 244
>gi|170284503|gb|AAI61041.1| Unknown (protein for MGC:184722) [Xenopus (Silurana) tropicalis]
Length = 210
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 109 ENSGFHVG-----PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCV 163
E + +HVG P +G+ + E VSVGEDGR+N + + D + + V
Sbjct: 117 EQAHYHVGSNMRAPCTGIVCSSPEIVSVGEDGRINCFRAESRDVVRTIDDADSST-MHGV 175
Query: 164 KWASPTEFVTGGFGYGLQWWDLRRAGS 190
+ TE +T L+ WDLR+ G+
Sbjct: 176 TFLRTTEILTVNSVGQLKLWDLRKQGN 202
>gi|73948053|ref|XP_854878.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Canis
lupus familiaris]
Length = 440
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 300 AHDGD----VNVINWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 349
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
I SV+ HP A G+ + WDL
Sbjct: 350 -ITSVEWHPQDSGVFAASGADNQITQWDL 377
>gi|429855471|gb|ELA30422.1| WD repeat-containing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 1236
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 163 VKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKH 222
VKW + T + +DL R +GG L+F + S ++S+DI+P R+
Sbjct: 112 VKWHGDSTIFTACANGNIFSYDLARIATGGTPLEFVQTR----EDSRQVNSLDINPHRRT 167
Query: 223 TCLAGGSSGTVFAWDLRWQQQS 244
T L+G G V +D+R QS
Sbjct: 168 TLLSGSQDGMVRYFDIRAPVQS 189
>gi|296234260|ref|XP_002762369.1| PREDICTED: glutamate-rich WD repeat-containing protein 1
[Callithrix jacchus]
Length = 445
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 305 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 354
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ 242
+ SV+ HP A G+ + WDL +Q
Sbjct: 355 -VTSVEWHPQDSGVFAASGADNQITQWDLAVEQ 386
>gi|47222413|emb|CAG12933.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 27/148 (18%)
Query: 150 RVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKAS 208
RV + + V + TE +T L+ WD R+ S +L G+
Sbjct: 196 RVIENADSSTIHAVTYLRTTEILTVNSIGQLKMWDFRQQSSSPSQILSLSGDRVP----- 250
Query: 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEV 268
+H VD HP+++H GG G + WD+R G+ +E+WEV
Sbjct: 251 --LHCVDRHPNQQHIVATGGQDGMLCVWDMR----------QGSAPFSLMEAHSAEMWEV 298
Query: 269 QYDCHTKSSNISSSRVLPAMFCSEDGIL 296
+ H + + CSEDG L
Sbjct: 299 HF--HPTNPD-------HLFTCSEDGSL 317
>gi|403299165|ref|XP_003940360.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 445
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 305 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHMAP------ 354
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 355 -VTSVEWHPQDSGVFAASGADNQITQWDL 382
>gi|26346496|dbj|BAC36899.1| unnamed protein product [Mus musculus]
Length = 416
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADNQITQWDL 383
>gi|52789447|gb|AAH83143.1| Grwd1 protein, partial [Mus musculus]
Length = 444
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 304 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAP------ 353
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 354 -VTSVEWHPQDSGVFAASGADNQITQWDL 381
>gi|301765073|ref|XP_002917920.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
[Ailuropoda melanoleuca]
gi|281348397|gb|EFB23981.1| hypothetical protein PANDA_006322 [Ailuropoda melanoleuca]
Length = 447
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 161 NCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
N + W+ F+ +GG L+ WDLR+ SG PV FK + + SV+ HP
Sbjct: 312 NVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHMAP-------VTSVEWHPQ 364
Query: 220 RKHTCLAGGSSGTVFAWDL 238
A G+ + WDL
Sbjct: 365 DSGVFTASGADNQITQWDL 383
>gi|417401050|gb|JAA47430.1| Putative ribosome assembly protein [Desmodus rotundus]
Length = 445
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 152 YDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGM 210
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 HDGD----VNVINWSHREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------- 354
Query: 211 IHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 355 VTSVEWHPQDSGVFAASGADNQITQWDL 382
>gi|91079028|ref|XP_974924.1| PREDICTED: similar to GA11814-PA [Tribolium castaneum]
gi|270004178|gb|EFA00626.1| hypothetical protein TcasGA2_TC003502 [Tribolium castaneum]
Length = 441
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 161 NCVKWASPTEFVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
N + W F+ G G L WDLRR PV FK + + + +V+ HP+
Sbjct: 311 NVISWNKNEPFIVSGGDDGFLHIWDLRRFQQKTPVATFKHH-------TEPVTTVEWHPT 363
Query: 220 RKHTCLAGGSSGTVFAWDL 238
++GGS V WDL
Sbjct: 364 DSAVFISGGSDNQVALWDL 382
>gi|163937861|ref|NP_700468.2| glutamate-rich WD repeat-containing protein 1 [Mus musculus]
gi|408360124|sp|Q810D6.2|GRWD1_MOUSE RecName: Full=Glutamate-rich WD repeat-containing protein 1;
AltName: Full=Protein A301
gi|148690955|gb|EDL22902.1| glutamate-rich WD repeat containing 1, isoform CRA_a [Mus musculus]
Length = 446
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADNQITQWDL 383
>gi|29420420|dbj|BAC66461.1| A301 protein [Mus musculus]
Length = 446
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADNQITQWDL 383
>gi|443734857|gb|ELU18713.1| hypothetical protein CAPTEDRAFT_166049 [Capitella teleta]
Length = 383
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 16/157 (10%)
Query: 95 HVLSSAMQVLLSVDENSGFHVGP---ISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKR- 150
H S + V+L + FH + V G V+VGEDGR+ LV++ E +
Sbjct: 110 HSNSQTLSVVLEWKDLHRFHSQAECACTSVAPHGDHFVTVGEDGRLCLVNM----EHRTP 165
Query: 151 --VYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKAS 208
V D N E T L+ WDLR++ V + F AS
Sbjct: 166 TAVIDKADSCSINAACMLKRDECATVNSSGQLKVWDLRQSQD---VPRASRLFLPSNSAS 222
Query: 209 G---MIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ 242
G ++ + HP++ H GG G + WD+R ++
Sbjct: 223 GERCALNCITNHPTQAHIVATGGQDGALSIWDMRQEK 259
>gi|14198122|gb|AAH08121.1| Grwd1 protein, partial [Mus musculus]
Length = 441
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 301 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAP------ 350
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 351 -VTSVEWHPQDSGVFAASGADNQITQWDL 378
>gi|440906369|gb|ELR56639.1| Glutamate-rich WD repeat-containing protein 1, partial [Bos
grunniens mutus]
Length = 456
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 316 AHDGD----VNVINWSHREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------ 365
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 366 -VTSVEWHPQDSGVFAASGADNQITQWDL 393
>gi|444705782|gb|ELW47173.1| Glutamate-rich WD repeat-containing protein 1 [Tupaia chinensis]
Length = 447
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 307 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------ 356
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 357 -VTSVEWHPQDSGVFAASGADNQITQWDL 384
>gi|410982824|ref|XP_003997747.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Felis
catus]
Length = 446
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADNQITQWDL 383
>gi|410922198|ref|XP_003974570.1| PREDICTED: WD repeat-containing protein 85-like [Takifugu rubripes]
Length = 433
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 114/324 (35%), Gaps = 50/324 (15%)
Query: 3 ITGVRTPPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDT--DADSPSLETHSISLPA 60
+ G +P +H F D V W P SP + + V Y + P I
Sbjct: 1 MNGGGSPRTLHVFDTELNADTVEWCPQ-SPHNNILVCGTYQLAGSVEEPDAAPSRIGRLY 59
Query: 61 SLTPHSQWTPPTRISSLSTS-------------HQSLVAASTLSGSLHVLSSAMQVLLSV 107
S TP T + L TS Q+++ + +G LH+ +LS
Sbjct: 60 LFRFQSSDTPLTELQRLDTSAILDLKWCHVPISEQTVLGMAAATGELHL------YMLSE 113
Query: 108 DENSGFHVGPISGVDLTGSECVSVGED---GR-----VNLVSVIGGGEFKRVYDGNGLVG 159
+E ++ P+S ++ G EC+ + D GR V LV G + G +
Sbjct: 114 NEEGNCYLQPLSNQEV-GKECLLLSLDWSTGRKDCSEVKLVCSDSAGCVNVLSMCEGTL- 171
Query: 160 FNCVKW-ASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKG----------NFGSQGKAS 208
+W A E F Y WD + SGG + KG F S+
Sbjct: 172 MPLSQWKAHDFEAWISAFSY----WDTQLIYSGGDDCKLKGWDLRMDPSHPTFTSKEHTM 227
Query: 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSI--VLSGVGTGEAVTHSLSESEVW 266
G+ S+ P R+H G V WD R ++ L G G H ++S +
Sbjct: 228 GVC-SIHSSPIREHILATGSYDEQVLLWDGRNMRKPFGHSLMGGGVWRLKWHPTNQSLLL 286
Query: 267 EVQYDCHTKSSNISSSRVLPAMFC 290
+ K N S+ P M C
Sbjct: 287 AACMHNNFKILNCQSAFESPGMTC 310
>gi|115495935|ref|NP_001069707.1| glutamate-rich WD repeat-containing protein 1 [Bos taurus]
gi|122134038|sp|Q1JQD2.1|GRWD1_BOVIN RecName: Full=Glutamate-rich WD repeat-containing protein 1
gi|94574111|gb|AAI16038.1| Glutamate-rich WD repeat containing 1 [Bos taurus]
gi|296477514|tpg|DAA19629.1| TPA: glutamate-rich WD repeat-containing protein 1 [Bos taurus]
Length = 446
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVINWSHREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADNQITQWDL 383
>gi|344270095|ref|XP_003406881.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Loxodonta
africana]
Length = 446
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
I SV+ HP A G+ + WDL
Sbjct: 356 -ITSVEWHPQDGGVFAASGADNQITQWDL 383
>gi|431920807|gb|ELK18580.1| Glutamate-rich WD repeat-containing protein 1 [Pteropus alecto]
Length = 445
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 305 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 354
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 355 -VTSVEWHPRDSGVFAASGADNQITQWDL 382
>gi|426243097|ref|XP_004015400.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Ovis
aries]
Length = 446
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVINWSHREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADNQITQWDL 383
>gi|395858434|ref|XP_003801576.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Otolemur
garnettii]
Length = 445
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 305 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------ 354
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 355 -VTSVEWHPQDSGVFAASGADNQITQWDL 382
>gi|291415078|ref|XP_002723781.1| PREDICTED: glutamate-rich WD repeat containing 1 [Oryctolagus
cuniculus]
Length = 447
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 152 YDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGM 210
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 308 HDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------- 356
Query: 211 IHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 357 VTSVEWHPQDSGVFAASGADNQITQWDL 384
>gi|311257842|ref|XP_003127319.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like [Sus
scrofa]
Length = 445
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 161 NCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
N + W+ F+ +GG L+ WDLR+ SG PV FK + + SV+ HP
Sbjct: 311 NVISWSRQEPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP-------VTSVEWHPQ 363
Query: 220 RKHTCLAGGSSGTVFAWDL 238
A G+ + WDL
Sbjct: 364 DSGVFAASGADNQITQWDL 382
>gi|148690956|gb|EDL22903.1| glutamate-rich WD repeat containing 1, isoform CRA_b [Mus musculus]
Length = 343
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 152 YDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGM 210
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 204 HDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAP------- 252
Query: 211 IHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 253 VTSVEWHPQDSGVFAASGADNQITQWDL 280
>gi|22137666|gb|AAH28896.1| Glutamate-rich WD repeat containing 1 [Mus musculus]
Length = 342
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 152 YDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGM 210
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 203 HDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAP------- 251
Query: 211 IHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 252 VTSVEWHPQDSGVFAASGADNQITQWDL 279
>gi|452820623|gb|EME27663.1| H3/H4 histone acetyltransferase [Galdieria sulphuraria]
Length = 425
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 32/178 (17%)
Query: 83 SLVAASTLSGSLHVLS-------------SAMQVLLSVDENSGFHVGPISGVDLTGSECV 129
++A T+SG +H+ ++ Q+ L + GF G + G +
Sbjct: 136 QIIATKTVSGEVHIFDISKHPLKPPANNVASPQLRLRSPQKEGF--GLCWNPNQEGR-II 192
Query: 130 SVGEDGRVNLVSVIGGGEFKR------VYDGNGLVGFNCVKWASPTEFVTGGFG--YGLQ 181
S GED R+ L ++GGG+ + VY G+ V V + + ++++ G G +
Sbjct: 193 SAGEDRRIFLWDILGGGDKEEYVNPLNVYGGHTDV-VGDVSFHAHSQYLFGSVGDDRKIM 251
Query: 182 WWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
WD R + P + + + +I+ + +P +H + G + T+ WDLR
Sbjct: 252 LWDTRSSDVEHPSQEVEAH-------KDVINCLAFNPFSEHVLITGSADTTLCLWDLR 302
>gi|149757842|ref|XP_001488606.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Equus
caballus]
Length = 446
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADNQITQWDL 383
>gi|405972742|gb|EKC37492.1| Glutamate-rich WD repeat-containing protein 1 [Crassostrea gigas]
Length = 455
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTEFVTGGFGYGL-QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP 218
N + W F+ G GL + WDLR+ +G PV FK + + I S++ +P
Sbjct: 320 INVIHWNRKEPFIASGGDDGLIKIWDLRQFKNGKPVASFKHH-------TAPITSIEWNP 372
Query: 219 SRKHTCLAGGSSGTVFAWDLRWQQQS 244
+ A GS + WDL +++S
Sbjct: 373 NDSSVLAASGSDDQISIWDLAVEKES 398
>gi|297705369|ref|XP_002829554.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Pongo
abelii]
Length = 446
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----INVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|295986935|gb|ADG64887.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
gi|295986949|gb|ADG64894.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
Length = 621
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 13/132 (9%)
Query: 109 ENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
+ +G H G I ++ G+ V+ E V + I E +V D + NC+K+
Sbjct: 42 DEAGRHTGAIFNLEFNADGNVLVAATERKCVLVFDAITQKEIVKVPDAH-TDSVNCIKFF 100
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
F TG + + WDLR VL N+ + S S+ ++
Sbjct: 101 DDRLFATGSDDFTVALWDLRNMREKLRVLHGHSNWVKNIEYS----------SKDKLLVS 150
Query: 227 GGSSGTVFAWDL 238
G G++F WD+
Sbjct: 151 SGFDGSIFTWDI 162
>gi|195158445|ref|XP_002020096.1| GL13687 [Drosophila persimilis]
gi|194116865|gb|EDW38908.1| GL13687 [Drosophila persimilis]
Length = 621
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 109 ENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
+ +G H G I ++ G+ V+ E V + I E +V D + NC+K+
Sbjct: 42 DEAGRHTGAIFNLEFNADGNVLVAATERKCVLVFDAITQKEIVKVPDAH-TDSVNCIKFF 100
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
F TG + + WDLR VL N+ + +++ + S+ ++
Sbjct: 101 DDRLFATGSDDFTVALWDLRNMREKLRVLHGHSNW---------VKNIE-YSSKDKLLVS 150
Query: 227 GGSSGTVFAWDL 238
G G++F WD+
Sbjct: 151 SGFDGSIFTWDI 162
>gi|295986941|gb|ADG64890.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
Length = 621
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 13/132 (9%)
Query: 109 ENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
+ +G H G I ++ G+ V+ E V + I E +V D + NC+K+
Sbjct: 42 DEAGRHTGAIFNLEFNADGNVLVAATERKCVLVFDAITQKEIVKVPDAH-TDSVNCIKFF 100
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
F TG + + WDLR VL N+ + S S+ ++
Sbjct: 101 DDRLFATGSDDFTVALWDLRNMREKLRVLHGHSNWVKNIEYS----------SKDKLLVS 150
Query: 227 GGSSGTVFAWDL 238
G G++F WD+
Sbjct: 151 SGFDGSIFTWDI 162
>gi|295986939|gb|ADG64889.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
Length = 621
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 109 ENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
+ +G H G I ++ G+ V+ E V + I E +V D + NC+K+
Sbjct: 42 DEAGRHTGAIFNLEFNADGNVLVAATERKCVLVFDAITQKEIVKVPDAH-TDSVNCIKFF 100
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
F TG + + WDLR VL N+ + +++ + S+ ++
Sbjct: 101 DDRLFATGSDDFTVALWDLRNMREKLRVLHGHSNW---------VKNIE-YSSKDKLLVS 150
Query: 227 GGSSGTVFAWDL 238
G G++F WD+
Sbjct: 151 SGFDGSIFTWDI 162
>gi|344305002|gb|EGW35234.1| hypothetical protein SPAPADRAFT_48258 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1368
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTE-----FVTGGFGYGL-QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213
F + W+ P E + G F GL ++WD + Q + SQ K +G + S
Sbjct: 65 FYALAWSKPFEGRPQGLLAGAFENGLVEFWDADILIKTKDLAQ-ASVYKSQ-KHTGAVKS 122
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ +P + H ++GGS G +F WD +
Sbjct: 123 LQFNPIQNHVLVSGGSHGQIFVWDTK 148
>gi|295986943|gb|ADG64891.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
gi|295986947|gb|ADG64893.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
gi|295986951|gb|ADG64895.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
gi|295986953|gb|ADG64896.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
Length = 621
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 109 ENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
+ +G H G I ++ G+ V+ E V + I E +V D + NC+K+
Sbjct: 42 DEAGRHTGAIFNLEFNADGNVLVAATERKCVLVFDAITQKEIVKVPDAH-TDSVNCIKFF 100
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
F TG + + WDLR VL N+ + +++ + S+ ++
Sbjct: 101 DDRLFATGSDDFTVALWDLRNMREKLRVLHGHSNW---------VKNIE-YSSKDKLLVS 150
Query: 227 GGSSGTVFAWDL 238
G G++F WD+
Sbjct: 151 SGFDGSIFTWDI 162
>gi|295986937|gb|ADG64888.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
Length = 621
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 109 ENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
+ +G H G I ++ G+ V+ E V + I E +V D + NC+K+
Sbjct: 42 DEAGRHTGAIFNLEFNADGNVLVAATERKCVLVFDAITQKEIVKVPDAH-TDSVNCIKFF 100
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
F TG + + WDLR VL N+ + +++ + S+ ++
Sbjct: 101 DDRLFATGSDDFTVALWDLRNMREKLRVLHGHSNW---------VKNIE-YSSKDKLLVS 150
Query: 227 GGSSGTVFAWDL 238
G G++F WD+
Sbjct: 151 SGFDGSIFTWDI 162
>gi|295986933|gb|ADG64886.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
Length = 621
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 109 ENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
+ +G H G I ++ G+ V+ E V + I E +V D + NC+K+
Sbjct: 42 DEAGRHTGAIFNLEFNADGNVLVAATERKCVLVFDAITQKEIVKVPDAH-TDSVNCIKFF 100
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
F TG + + WDLR VL N+ + +++ + S+ ++
Sbjct: 101 DDRLFATGSDDFTVALWDLRNMREKLRVLHGHSNW---------VKNIE-YSSKDKLLVS 150
Query: 227 GGSSGTVFAWDL 238
G G++F WD+
Sbjct: 151 SGFDGSIFTWDI 162
>gi|125773213|ref|XP_001357865.1| GA13587 [Drosophila pseudoobscura pseudoobscura]
gi|54637598|gb|EAL27000.1| GA13587 [Drosophila pseudoobscura pseudoobscura]
gi|295986955|gb|ADG64897.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
Length = 621
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 109 ENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
+ +G H G I ++ G+ V+ E V + I E +V D + NC+K+
Sbjct: 42 DEAGRHTGAIFNLEFNADGNVLVAATERKCVLVFDAITQKEIVKVPDAH-TDSVNCIKFF 100
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
F TG + + WDLR VL N+ + +++ + S+ ++
Sbjct: 101 DDRLFATGSDDFTVALWDLRNMREKLRVLHGHSNW---------VKNIE-YSSKDKLLVS 150
Query: 227 GGSSGTVFAWDL 238
G G++F WD+
Sbjct: 151 SGFDGSIFTWDI 162
>gi|332241765|ref|XP_003270050.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-rich WD repeat-containing
protein 1 [Nomascus leucogenys]
Length = 417
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 277 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 326
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 327 -VTSVEWHPQDSGVFAASGADHQITQWDL 354
>gi|18916728|dbj|BAB85528.1| KIAA1942 protein [Homo sapiens]
Length = 445
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 305 AHDGD----VNVISWSRQEPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 354
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 355 -VTSVEWHPQDSGVFAASGADHQITQWDL 382
>gi|354500301|ref|XP_003512239.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
[Cricetulus griseus]
gi|344255047|gb|EGW11151.1| Glutamate-rich WD repeat-containing protein 1 [Cricetulus griseus]
Length = 445
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 305 AHDGD----VNVISWSRREPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQHMAP------ 354
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 355 -VTSVEWHPQDSGVFAASGADNQITQWDL 382
>gi|168270782|dbj|BAG10184.1| glutamate-rich WD repeat-containing protein 1 [synthetic construct]
Length = 446
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRQEPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|380481505|emb|CCF41804.1| WD repeat domain-containing protein [Colletotrichum higginsianum]
Length = 1261
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 163 VKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKH 222
V+W + T + +DL R +GG L+F + S ++S+DI+P R+
Sbjct: 121 VRWHGDSTIFTACANGKIFSYDLARISTGGAALEFV----QTREDSRQVNSLDINPHRQT 176
Query: 223 TCLAGGSSGTVFAWDLRWQQQS 244
T L+G G V +D+R QS
Sbjct: 177 TLLSGSQDGMVRYFDIRAPVQS 198
>gi|355693780|gb|AER99448.1| glutamate-rich WD repeat containing 1 [Mustela putorius furo]
Length = 444
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 304 AHDGD----VNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP------ 353
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 354 -VTSVEWHPQDSGVFAASGADNQITQWDL 381
>gi|301104795|ref|XP_002901482.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262100957|gb|EEY59009.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 593
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 70 PPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVG----------PIS 119
PPT I+ S + Q +L SLH Q +L++ + H+ PI
Sbjct: 30 PPTSINISSITLQRSSIQRSLFASLHC---PRQRVLALRDGPEAHINGQATGSLLSLPIF 86
Query: 120 GVDLTGSECV--SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG 177
V S+ + +V E+G V + ++ G R + V F+ + T+ +T
Sbjct: 87 QVAYAHSKNLLAAVDEEGAVGVFNMAAGRRKGRWMAHHNAV-FDVIWTQDDTQILTAAGD 145
Query: 178 YGLQWWDLRRAGSGG--PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235
++ WD++ AGS PV KG+ S + V P + H +GG G +
Sbjct: 146 LEIRIWDVQTAGSSSSTPVSTLKGHEMS-------VKCVRQGPDKAHMFASGGRDGRLLL 198
Query: 236 WDLR 239
WD R
Sbjct: 199 WDTR 202
>gi|426389459|ref|XP_004061139.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Gorilla
gorilla gorilla]
Length = 445
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 305 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 354
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 355 -VTSVEWHPQDSGVFAASGADHQITQWDL 382
>gi|397509276|ref|XP_003825054.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like [Pan
paniscus]
Length = 446
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|355755997|gb|EHH59744.1| hypothetical protein EGM_09931 [Macaca fascicularis]
Length = 446
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|332856486|ref|XP_003316533.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-rich WD repeat-containing
protein 1 [Pan troglodytes]
Length = 417
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 277 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 326
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 327 -VTSVEWHPQDSGVFAASGADHQITQWDL 354
>gi|19584465|emb|CAD28519.1| hypothetical protein [Homo sapiens]
Length = 446
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|22760272|dbj|BAC11130.1| unnamed protein product [Homo sapiens]
Length = 446
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|397486030|ref|XP_003846140.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-rich WD repeat-containing
protein 1 [Pan paniscus]
gi|410213506|gb|JAA03972.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410264362|gb|JAA20147.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410264364|gb|JAA20148.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410264366|gb|JAA20149.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410264368|gb|JAA20150.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410264370|gb|JAA20151.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410264372|gb|JAA20152.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410303030|gb|JAA30115.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410303032|gb|JAA30116.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410348820|gb|JAA41014.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410348822|gb|JAA41015.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410348824|gb|JAA41016.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
gi|410348826|gb|JAA41017.1| glutamate-rich WD repeat containing 1 [Pan troglodytes]
Length = 446
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|189055009|dbj|BAG37993.1| unnamed protein product [Homo sapiens]
Length = 446
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|237820620|ref|NP_113673.3| glutamate-rich WD repeat-containing protein 1 [Homo sapiens]
gi|18202731|sp|Q9BQ67.1|GRWD1_HUMAN RecName: Full=Glutamate-rich WD repeat-containing protein 1
gi|13274611|gb|AAK17998.1|AF337808_1 glutamate rich WD repeat protein [Homo sapiens]
gi|12803253|gb|AAH02440.1| Glutamate-rich WD repeat containing 1 [Homo sapiens]
gi|117574240|gb|ABK41104.1| CDW4/GRWD1 [Homo sapiens]
gi|119572732|gb|EAW52347.1| glutamate-rich WD repeat containing 1 [Homo sapiens]
gi|123984421|gb|ABM83556.1| glutamate-rich WD repeat containing 1 [synthetic construct]
gi|123998385|gb|ABM86794.1| glutamate-rich WD repeat containing 1 [synthetic construct]
Length = 446
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|307153033|ref|YP_003888417.1| peptidase M14 carboxypeptidase A [Cyanothece sp. PCC 7822]
gi|306983261|gb|ADN15142.1| peptidase M14 carboxypeptidase A [Cyanothece sp. PCC 7822]
Length = 557
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%)
Query: 119 SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTE 170
G +LTG ECVSV D R + V G YD G GF W +PT+
Sbjct: 297 KGTNLTGYECVSVYHDFRDHPTKVTHGAMDDYCYDHFGWFGFTVELWDAPTQ 348
>gi|355703728|gb|EHH30219.1| hypothetical protein EGK_10838 [Macaca mulatta]
gi|383411969|gb|AFH29198.1| glutamate-rich WD repeat-containing protein 1 [Macaca mulatta]
gi|384949728|gb|AFI38469.1| glutamate-rich WD repeat-containing protein 1 [Macaca mulatta]
Length = 446
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|295986945|gb|ADG64892.1| hypothetical protein GA13587 [Drosophila pseudoobscura]
Length = 621
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 109 ENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
+ +G H G I ++ G+ V+ E V + I E +V D + NC+K+
Sbjct: 42 DEAGRHTGAIFNLEFNADGNVLVAATERKCVLVFDAITQKEIVKVPDAH-TDSVNCIKFF 100
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
F TG + + WDLR VL N+ + +++ + S+ ++
Sbjct: 101 DDRLFATGSDDFTVALWDLRNMREKLRVLHGHSNW---------VKNIE-YSSKDKLLVS 150
Query: 227 GGSSGTVFAWDL 238
G G++F WD+
Sbjct: 151 SGFDGSIFTWDI 162
>gi|402906165|ref|XP_003915874.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Papio
anubis]
Length = 446
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|109125395|ref|XP_001113650.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Macaca
mulatta]
Length = 446
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 306 AHDGD----VNVISWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP------ 355
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 356 -VTSVEWHPQDSGVFAASGADHQITQWDL 383
>gi|241949171|ref|XP_002417308.1| protein transport protein, putative; transport vesicle coat
component protein, putative [Candida dubliniensis CD36]
gi|223640646|emb|CAX44941.1| protein transport protein, putative [Candida dubliniensis CD36]
Length = 1262
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTE-----FVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213
F + W+ P E + G F G +++WD + K + K +G + S
Sbjct: 66 FYALAWSKPFEGRPQGLLAGAFENGTVEFWDADVLIKSKDLA--KASVHKSNKHTGAVKS 123
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ +P + H + GGS+G +F WD +
Sbjct: 124 LQFNPIQNHVLVTGGSNGQIFIWDTK 149
>gi|402086083|gb|EJT80981.1| hypothetical protein GGTG_00971 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 343
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 21/100 (21%)
Query: 180 LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDI-----HPSRKHTCLAGGSSGTVF 234
L +WD+RRA PV+Q+ +HS DI HP+ + L+G + G V
Sbjct: 137 LVFWDVRRASE--PVIQYN-----------EVHSDDITELNFHPTDTNLLLSGSTDGLVN 183
Query: 235 AWDLRW-QQQSIVLSGVGTGEAVTHS--LSESEVWEVQYD 271
+DL+ + +V+ ++ HS L++SE++ + +D
Sbjct: 184 VYDLKITDEDEVVIQTFNHDASIHHSGFLNQSELFALSHD 223
>gi|310798721|gb|EFQ33614.1| WD domain-containing protein [Glomerella graminicola M1.001]
Length = 1301
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 24/159 (15%)
Query: 106 SVDENSGFHVG-PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLV------ 158
SV +N+ F G PI +D + C +V V V G D +
Sbjct: 43 SVPQNATFSAGVPILCLDSSPDRCAAVIAGRHVLKTIVFDGLSVNEAIDLRSAITAQSAS 102
Query: 159 -------------GFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQG 205
VKW + T + +DL R GG L+F
Sbjct: 103 SKTASSSLTADQLSIRDVKWHGDSTIFTACANGKIFSYDLARISIGGAALEFV----QTR 158
Query: 206 KASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQS 244
+ S ++S+DI+P R+ T L+G G V +D+R QS
Sbjct: 159 EDSRQVNSLDINPHRQTTLLSGSQDGMVRYFDIRAPVQS 197
>gi|19173438|ref|NP_597241.1| GUANINE NUCLEOTIDE BINDING PROTEIN BETA SUBUNIT [Encephalitozoon
cuniculi GB-M1]
gi|74697521|sp|Q8SRB0.1|GBLP_ENCCU RecName: Full=Guanine nucleotide-binding protein subunit beta-like
protein
gi|19171027|emb|CAD26417.1| GUANINE NUCLEOTIDE BINDING PROTEIN BETA SUBUNIT [Encephalitozoon
cuniculi GB-M1]
Length = 334
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 112 GFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKR--VYDGNGLVGFNCVKWAS 167
G H I+G+D++ G+ V+VG DG + I E K+ + +G+G ++
Sbjct: 64 GGHSKRINGLDVSKDGNMMVTVGSDG----IGRIWDTESKKSILLEGHGRDVLCVSINSN 119
Query: 168 PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG 227
T+ VTG + ++ + G VL+ + + G I+ V HP+ + +G
Sbjct: 120 DTKIVTGSVDRTMNLYNTK----GDLVLKMGRDMEMMHR--GWINCVTFHPTEESILASG 173
Query: 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPA 287
+ GTV WDL Q+ + + +G E + V YD S+ + A
Sbjct: 174 SADGTVKIWDLDTQEH--LQTYLGGAYVDYEKAKEKKTSPVDYD---------ESKSVTA 222
Query: 288 MFCSEDG-ILAVVEQGEEPF--ELLAEPCAINSFD 319
M S+DG IL E+ + + ++ ++ C I SFD
Sbjct: 223 MAFSKDGSILTYGEKSGKMYLVKVDSKEC-IQSFD 256
>gi|294656788|ref|XP_459108.2| DEHA2D14476p [Debaryomyces hansenii CBS767]
gi|218511779|sp|Q6BRR2.2|SEC31_DEBHA RecName: Full=Protein transport protein SEC31
gi|199431745|emb|CAG87276.2| DEHA2D14476p [Debaryomyces hansenii CBS767]
Length = 1265
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 138 NLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTE-----FVTGGFGYGL-QWWD---LRRA 188
++ S GG K V+ + F + W+ P E + G F G+ ++WD L ++
Sbjct: 46 DIFSPTNGG--KPVFSASVDNRFYALAWSKPFEGRPKGLLAGAFENGVVEFWDAEVLIKS 103
Query: 189 GSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
KG K SG + ++ +P++ H + GGS+G +F WD +
Sbjct: 104 KDLNKASVHKGT-----KHSGPVKTLSFNPNQDHVLVTGGSNGEIFIWDTK 149
>gi|427725486|ref|YP_007072763.1| WD-40 repeat-containing protein [Leptolyngbya sp. PCC 7376]
gi|427357206|gb|AFY39929.1| WD-40 repeat-containing protein [Leptolyngbya sp. PCC 7376]
Length = 1177
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSG-------VGTGE-----AV 256
G+I SV I P H AGGS GT+ W++ ++ + L G + E A
Sbjct: 555 GLIFSVRISPDGNHL-FAGGSDGTIHVWNIHTREYTASLQGHSSWLRAIAMSEHNRLIAG 613
Query: 257 THSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAV 298
+H E W++ H ++ + VL F E ILAV
Sbjct: 614 SHEHGEIRFWDLDTFQHLETLKLQGGSVLSTAFSPEQDILAV 655
>gi|58865700|ref|NP_001012067.1| glutamate-rich WD repeat-containing protein 1 [Rattus norvegicus]
gi|78099199|sp|Q5XI13.1|GRWD1_RAT RecName: Full=Glutamate-rich WD repeat-containing protein 1
gi|53734294|gb|AAH83883.1| Glutamate-rich WD repeat containing 1 [Rattus norvegicus]
gi|149055860|gb|EDM07291.1| rCG54268, isoform CRA_a [Rattus norvegicus]
Length = 445
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 151 VYDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 305 AHDGD----VNVISWSRREPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAP------ 354
Query: 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 355 -VTSVEWHPQDSGVFAASGADNQITQWDL 382
>gi|345564923|gb|EGX47879.1| hypothetical protein AOL_s00081g206 [Arthrobotrys oligospora ATCC
24927]
Length = 1267
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 54/217 (24%)
Query: 39 LAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLS 98
L ++D D DS +S + LTP + + R ++ + ++A +GSL
Sbjct: 42 LELWDLDLDS------GVSEASELTPKATLSTDARFYGIAWGKRGIIAGGLENGSL---- 91
Query: 99 SAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLV 158
DL +E + GE G V +S G +
Sbjct: 92 -----------------------DLWNAESLFKGESGTVESLSKHTGAI--------KAL 120
Query: 159 GFNCVKWASPTEFVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIH 217
FN K E + G G + WDL + P L G++ +A SVD +
Sbjct: 121 QFNPFK----DELLLTAGGQGEIYVWDLN--NTANPFL-----LGTRARADDF-SSVDWN 168
Query: 218 PSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGE 254
H L+GG +G V WD++ +++S+ LS +G E
Sbjct: 169 KKIPHILLSGGKNGLVTVWDVKQKKESLTLSHLGRKE 205
>gi|354546520|emb|CCE43252.1| hypothetical protein CPAR2_208970 [Candida parapsilosis]
Length = 1279
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTE-----FVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213
F + W+ P E + G F G +++WD+ + K + K +G + S
Sbjct: 66 FYALAWSKPFEGRSKGLLAGAFENGTVEFWDVATLIKTKDLD--KSSVHKSNKHTGAVKS 123
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ +P + H + GGS+G +F WD +
Sbjct: 124 MQFNPIQPHVLVTGGSNGQIFVWDTK 149
>gi|448106979|ref|XP_004200874.1| Piso0_003484 [Millerozyma farinosa CBS 7064]
gi|448109981|ref|XP_004201505.1| Piso0_003484 [Millerozyma farinosa CBS 7064]
gi|359382296|emb|CCE81133.1| Piso0_003484 [Millerozyma farinosa CBS 7064]
gi|359383061|emb|CCE80368.1| Piso0_003484 [Millerozyma farinosa CBS 7064]
Length = 423
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 157 LVGFNCVKWASPTEFV-TGGFGYGLQWWDLRR--AGSGGPVLQFKGNFGSQGKASGMIHS 213
++G VK + ++ +G ++ WDL + + SG + + G+ G I+S
Sbjct: 167 IMGVRAVKISKRYPYLFSGSEDKTVRCWDLEKTNSASGCQIRNYHGHVGG-------IYS 219
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSG 249
+ IHP +GG V AWD+R + Q++VL+G
Sbjct: 220 LAIHPELD-ILFSGGRDSVVRAWDIRSRAQAMVLTG 254
>gi|348559558|ref|XP_003465583.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
[Cavia porcellus]
Length = 445
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 161 NCVKWASPTEFVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
N + W+ F+ G G L+ WDLR+ SG PV FK + + SV+ HP
Sbjct: 311 NVISWSRREPFLLSGGDDGVLKVWDLRQFKSGSPVATFKQHVAP-------VTSVEWHPQ 363
Query: 220 RKHTCLAGGSSGTVFAWDL 238
A G+ + WDL
Sbjct: 364 DSGVFAASGADNQITQWDL 382
>gi|149055861|gb|EDM07292.1| rCG54268, isoform CRA_b [Rattus norvegicus]
Length = 342
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 152 YDGNGLVGFNCVKWASPTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGM 210
+DG+ N + W+ F+ +GG L+ WDLR+ SG PV FK +
Sbjct: 203 HDGD----VNVISWSRREPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAP------- 251
Query: 211 IHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ SV+ HP A G+ + WDL
Sbjct: 252 VTSVEWHPQDSGVFAASGADNQITQWDL 279
>gi|194745198|ref|XP_001955075.1| GF16426 [Drosophila ananassae]
gi|190628112|gb|EDV43636.1| GF16426 [Drosophila ananassae]
Length = 633
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 125 GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWD 184
G+ V+ E V + + E +V D + + NC+K+ F TG Y + WD
Sbjct: 63 GNVVVAATERKCVLVFDAVTQQEIFKVPDAH-MDSVNCIKFFDERLFATGSDDYTVALWD 121
Query: 185 LRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQS 244
LR VL N+ + +++ + S+ ++ G G++F WD+ Q +
Sbjct: 122 LRNMKQKMRVLHGHSNW---------VKNIE-YSSKDKLLVSSGFDGSIFTWDINSQTEQ 171
Query: 245 IVLS 248
++S
Sbjct: 172 GLIS 175
>gi|333397681|ref|ZP_08479494.1| Phage-related tail protein [Leuconostoc gelidum KCTC 3527]
Length = 1927
Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 141 SVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSG------GPV 194
S IGG + + DGN G VK + F G G + +D AG G
Sbjct: 1738 SAIGGND--GLADGNA-TGLMQVKPGTFNAFALAGHGNIMNGYDNMLAGINYAKSRYGSD 1794
Query: 195 LQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGE 254
L F GN G A+G I +V P H GG + V WDL + +++ L GE
Sbjct: 1795 LSFLGN--GHGYANGTITNV---PHVAHIA-EGGMTEAVIPWDLSKKSRAMEL----LGE 1844
Query: 255 AVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAE 311
VTH S + +T S+N + S VL D + +++QGE+ LL +
Sbjct: 1845 TVTHFASNT------ISNNTTSNNGADSNVLA------DKLNNMIKQGEQVISLLLQ 1889
>gi|68474196|ref|XP_718807.1| likely COPII vesicle coat component [Candida albicans SC5314]
gi|68474369|ref|XP_718724.1| likely COPII vesicle coat component [Candida albicans SC5314]
gi|74680107|sp|Q5AAU3.1|SEC31_CANAL RecName: Full=Protein transport protein SEC31
gi|46440508|gb|EAK99813.1| likely COPII vesicle coat component [Candida albicans SC5314]
gi|46440596|gb|EAK99900.1| likely COPII vesicle coat component [Candida albicans SC5314]
Length = 1265
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTE-----FVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213
F + W+ P E + G F G +++WD + K + K +G + S
Sbjct: 66 FYALAWSKPFEGRPQGLLAGAFENGTVEFWDADVLIKTKDLA--KASVHKSNKHTGAVKS 123
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ +P + H + GGS+G +F WD +
Sbjct: 124 LQFNPIQNHVLVTGGSNGQIFIWDTK 149
>gi|238878872|gb|EEQ42510.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1268
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTE-----FVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213
F + W+ P E + G F G +++WD + K + K +G + S
Sbjct: 66 FYALAWSKPFEGRPQGLLAGAFENGTVEFWDADVLIKTKDLA--KASVHKSNKHTGAVKS 123
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ +P + H + GGS+G +F WD +
Sbjct: 124 LQFNPIQNHVLVTGGSNGQIFIWDTK 149
>gi|320167937|gb|EFW44836.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 307
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 34 SKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGS 93
++ A + D A P + + TP +Q P R++S + +SL+ A
Sbjct: 45 ARSAADPVDDAQARGPRTPLPANRSGGNATPTAQPGQPLRVAS-TLQRRSLIRAD----- 98
Query: 94 LHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSEC-VSVGEDGRVNLVSVIGGGEFKRV 151
LS A + E GF+ ++ T G EC V+ +G L+ E RV
Sbjct: 99 ---LSDAER-----PEYGGFY-----NLEFTPGGECLVATASNGAFLLLDPRTYSEVGRV 145
Query: 152 YDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRR 187
+ +G G N V++ + F TGG + ++ WDLR+
Sbjct: 146 SNAHGGEGVNVVRFLNERVFATGGDDFSVKLWDLRK 181
>gi|320163208|gb|EFW40107.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 347
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 49/191 (25%)
Query: 116 GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEF---KRVYDGNGLVGFNCVKWASPTEFV 172
P++GV L +VG+ G V + E RV N V +++P++ V
Sbjct: 135 APVTGVSLQDDNVAAVGDTGDVAVFPFTRVHEKLVPTRVLSDPDGCALNGVSFSTPSQIV 194
Query: 173 TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT 232
T ++ WDLR+ G+ SV S+ + +G
Sbjct: 195 TVNHAGRMRVWDLRQPGN---------------------QSVRAVKSQPNILATSSYAGV 233
Query: 233 VFAWDLRWQQ---QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMF 289
V WD+R++ +S+V +SES VW+V++ T++S + +
Sbjct: 234 VDVWDVRFEDAPLRSVV-------------ISESPVWDVRFH-PTRNSQM--------VC 271
Query: 290 CSEDGILAVVE 300
CSEDG ++++
Sbjct: 272 CSEDGSASLLD 282
>gi|448511986|ref|XP_003866648.1| Pga63 protein [Candida orthopsilosis Co 90-125]
gi|380350986|emb|CCG21209.1| Pga63 protein [Candida orthopsilosis Co 90-125]
Length = 1275
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTE-----FVTGGFGYGL-QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213
F + W+ P + + G F G+ ++WD+ + K + K +G + S
Sbjct: 66 FYALAWSKPFDGRSSGLLAGAFENGIVEFWDVATLIKTKDLA--KSSVHKSNKHTGAVKS 123
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ +P + H + GGS+G +F WD +
Sbjct: 124 LQFNPIQPHVLVTGGSNGQIFVWDTK 149
>gi|390562650|ref|ZP_10244838.1| hypothetical protein NITHO_3120012 [Nitrolancetus hollandicus Lb]
gi|390172778|emb|CCF84150.1| hypothetical protein NITHO_3120012 [Nitrolancetus hollandicus Lb]
Length = 298
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 125 GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWD 184
G+ +S DG V L V E +R + G+ L+ V S T ++GG ++ WD
Sbjct: 28 GTRILSAAGDGTVRLWDVASRQEIRR-FRGHSLIVRTVVFSPSGTRALSGGLDGTVRLWD 86
Query: 185 LRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ +G + +F+G+ +G +++V P+R+ L+GG TV WD+
Sbjct: 87 VE---TGKEIRRFQGH-------TGWVYNVGF-PAREDRVLSGGWDSTVRLWDV 129
>gi|224048081|ref|XP_002188702.1| PREDICTED: nucleoporin Nup43 [Taeniopygia guttata]
Length = 341
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 6/134 (4%)
Query: 107 VDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166
VD+++ +GV E V+VGEDGR+NL + R D + V +
Sbjct: 126 VDQDTACGGAACTGVVCNNPEIVTVGEDGRINLFRA-DQKDAVRTIDNADSSTLHAVTFL 184
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGM---IHSVDIHPSRKHT 223
TE +T L+ WDLR+ + + N + A GM + V HPS
Sbjct: 185 RTTEILTVNSIGQLKIWDLRQQRNEPSQIFSLPNV--RFLAFGMYLNVWEVHFHPSDPDH 242
Query: 224 CLAGGSSGTVFAWD 237
G+++ WD
Sbjct: 243 LFTCSEDGSLWHWD 256
>gi|443919879|gb|ELU39933.1| glutamate-rich WD repeat-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 460
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 74/192 (38%), Gaps = 40/192 (20%)
Query: 89 TLSGSLHVLSSAM--QVLLSVDENSGF---------HVGPISGVDLTGSECV---SVGED 134
T G + +LS + ++ L+ SGF H P+ + + SE S D
Sbjct: 271 TQIGGVRLLSGDLDGRIFLTTATQSGFTTAQAPFTSHTAPVEDIQWSPSEATVFSSCSSD 330
Query: 135 GRVNLVSVIGGG-----EFKRVYDGNGLVGFNCVKWASPTEFV--TGGFGYGLQWWDLRR 187
V + V G + ++ ++ + N + W T ++ TGG G++ WDLR
Sbjct: 331 KSVRVWDVRAKGKKSAAQIQKAHESD----VNVMSWNRGTSYLLATGGDEGGIKIWDLRN 386
Query: 188 AGSGG-----PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ 242
PV F + + I S++ HPS A GS V WDL +Q
Sbjct: 387 LKEASSNPPSPVAHFSWH-------TAPITSIEWHPSEDSIFSASGSDDQVTLWDLSVEQ 439
Query: 243 QSIVLSGVGTGE 254
VGT E
Sbjct: 440 DE---DEVGTKE 448
>gi|147899734|ref|NP_001086012.1| glutamate-rich WD repeat containing 1 [Xenopus laevis]
gi|49118670|gb|AAH73699.1| MGC83609 protein [Xenopus laevis]
Length = 466
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 161 NCVKWASPTEFVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
N + W F+ G G L+ WDLR+ G V +FK + +G I SV+ HP+
Sbjct: 332 NVISWNRQEPFIVSGGDDGVLKIWDLRQFQKGVSVAKFK-------QHTGPITSVEWHPT 384
Query: 220 RKHTCLAGGSSGTVFAWDL 238
A G+ + WDL
Sbjct: 385 DSGVFAASGADDQITQWDL 403
>gi|443689048|gb|ELT91552.1| hypothetical protein CAPTEDRAFT_155831 [Capitella teleta]
Length = 406
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 157 LVGFNCVKWASPTEFVTGGFGYGL-QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVD 215
L N + W F+ G G+ + WDLR PV FK + + I SV+
Sbjct: 269 LRDINVISWNKHEPFIVSGGDDGMIKIWDLRNFQEASPVAVFKHH-------TAPITSVE 321
Query: 216 IHPSRKHTCLAGGSSGTVFAWDL 238
HP+ A GS + WDL
Sbjct: 322 WHPTDSSVLAASGSDDQITLWDL 344
>gi|307104774|gb|EFN53026.1| hypothetical protein CHLNCDRAFT_32300 [Chlorella variabilis]
Length = 496
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 115 VGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASP--TEFV 172
V I TG +S G DG++ + V + R Y G+ G + W S FV
Sbjct: 211 VNAIRFFPHTGHLLLSAGLDGQIKIWDVGSHRKCMRTYMGH-TKGVKDI-WFSNDGRRFV 268
Query: 173 TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT 232
+ G+ +++WD G +L N +GK M + V +HP +H +AG
Sbjct: 269 STGYDKKIRYWDT----ETGQIL----NTVGEGK---MSYCVRLHPEEQHIVMAGTQDKK 317
Query: 233 VFAWDL 238
+ WDL
Sbjct: 318 IQQWDL 323
>gi|449550873|gb|EMD41837.1| hypothetical protein CERSUDRAFT_42770 [Ceriporiopsis subvermispora
B]
Length = 510
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 161 NCVKWASPTEFV--TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP 218
N + W T ++ +GG G++ WDLR G + G I S++ HP
Sbjct: 366 NVISWNRSTSYLLLSGGDEGGIKVWDLRNVKKKGTAAADPTPVAAFNWHRGPITSIEWHP 425
Query: 219 SRKHTCLAGGSSGTVFAWDLRWQQ 242
S A GS V WDL +Q
Sbjct: 426 SEDSIFAASGSDDQVTLWDLAVEQ 449
>gi|322800096|gb|EFZ21202.1| hypothetical protein SINV_11778 [Solenopsis invicta]
Length = 452
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 161 NCVKWASPTE---FVTGGFGYGLQWWDLRRAGSGG--PVLQFKGNFGSQGKASGMIHSVD 215
N + W +P E V+GG L WDLR+ GS G PV FK + + + +V+
Sbjct: 318 NVISW-NPKECQFMVSGGDDGLLHVWDLRQLGSSGSSPVATFK-------QHTAPVTTVE 369
Query: 216 IHPSRKHTCLAGGSSGTVFAWDL 238
HP+ +GG+ + WDL
Sbjct: 370 WHPTEATVFASGGADDQIAQWDL 392
>gi|340503299|gb|EGR29900.1| WD40 repeat protein [Ichthyophthirius multifiliis]
Length = 156
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 114 HVGPISGVDLTGSE-CVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFN------CVKWA 166
+G I+ D+ ++ C+ VG+D ++N + G + + D + + CV
Sbjct: 37 KMGGINSFDVLNNDFCIIVGQDKKINFTN---GNKLIKSVDTSSFKSYQDECMSLCVS-K 92
Query: 167 SPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226
S T FVTGG ++ W++ G +L F +G S I+ V I + K ++
Sbjct: 93 SGTFFVTGGTEKSVKVWNIVN----GSLL-----FEGKGGHSSTINIVQISDNDKQI-IS 142
Query: 227 GGSSGTVFAWDL 238
GG G + WDL
Sbjct: 143 GGKDGNILIWDL 154
>gi|401421396|ref|XP_003875187.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491423|emb|CBZ26694.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 2751
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 15/127 (11%)
Query: 167 SPTEFVTGGFGYGLQWWDLR-----RAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRK 221
+P E+V G +G + +DLR A G + F+ S G S V
Sbjct: 2513 TPYEYVVGSYGMPVCVFDLRDGVTGAARRGVSLPSFRCCIRS-GLVSPFCLRVSYSRRYP 2571
Query: 222 HTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEV---------QYDC 272
+ +AG + GTV WD R+ +Q VL GV L+ SE Q D
Sbjct: 2572 NAVVAGYAGGTVAVWDRRYTKQPCVLFGVALDSPYATDLTSSEARAASAVAPRMIRQLDT 2631
Query: 273 HTKSSNI 279
H+ S
Sbjct: 2632 HSSSKRF 2638
>gi|325182283|emb|CCA16737.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325187300|emb|CCA21840.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 398
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 180 LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239
LQ WD++ A PVL S G + + S+++HP+R L G S G++ WD R
Sbjct: 232 LQIWDIK-ANKNFPVL-------SAGNGNTSLISLELHPTRPEILLTGSSDGSISFWDQR 283
>gi|351702592|gb|EHB05511.1| Glutamate-rich WD repeat-containing protein 1 [Heterocephalus
glaber]
Length = 446
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 161 NCVKWASPTEFVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
N + W+ F+ G G L+ WDLR+ SG P FK + + SV+ HP
Sbjct: 312 NVISWSRQEPFLLSGGDDGVLKVWDLRQFKSGSPAATFKQHVAP-------VTSVEWHPQ 364
Query: 220 RKHTCLAGGSSGTVFAWDL 238
A G+ + WDL
Sbjct: 365 DSGVFAASGADNQITQWDL 383
>gi|90423538|ref|YP_531908.1| peptidase S49 [Rhodopseudomonas palustris BisB18]
gi|90105552|gb|ABD87589.1| peptidase S49 [Rhodopseudomonas palustris BisB18]
Length = 262
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 143 IGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGP--VLQFKGN 200
IGGGE ++DG + G ++ + GGF LQW + G P +L F GN
Sbjct: 183 IGGGEIDEIFDGRLITGRRALEIGLVDQL--GGFETALQWLNANGVSVGEPPHMLIFLGN 240
Query: 201 FGSQGKASG 209
G++SG
Sbjct: 241 ASPSGQSSG 249
>gi|302771137|ref|XP_002968987.1| WD40 repeat protein [Selaginella moellendorffii]
gi|300163492|gb|EFJ30103.1| WD40 repeat protein [Selaginella moellendorffii]
Length = 352
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 170 EFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS 229
+ V G L+ WDLR V Q +G + +D +P R+HT + G
Sbjct: 179 DIVATACGTSLKCWDLRTMREASTVDQAH---------AGQVRDLDYNPKRQHTIVTSGD 229
Query: 230 SGTVFAWDLR 239
V WDLR
Sbjct: 230 DSKVRVWDLR 239
>gi|405123039|gb|AFR97804.1| glutamate-rich WD repeat containing 1 [Cryptococcus neoformans var.
grubii H99]
Length = 496
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 21/111 (18%)
Query: 131 VGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEF--VTGGFGYGLQWWDLRR- 187
V GR ++VSV E N + W ++ V+GG GL+ WDLR
Sbjct: 340 VRAKGRKSVVSVEAHSE-----------DVNVISWNKAVDYLLVSGGDEGGLKVWDLRMF 388
Query: 188 AGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238
+ PV QF+ + + I SV+ HP+ A GS + WDL
Sbjct: 389 KNTPSPVAQFQWH-------TAPITSVEWHPTDSSVFAASGSDDQLTLWDL 432
>gi|150951472|ref|XP_001387795.2| component of the COPII coat of ER-Golgi vesicles [Scheffersomyces
stipitis CBS 6054]
gi|284018123|sp|A3GFK8.2|SEC31_PICST RecName: Full=Protein transport protein SEC31
gi|149388622|gb|EAZ63772.2| component of the COPII coat of ER-Golgi vesicles [Scheffersomyces
stipitis CBS 6054]
Length = 1244
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 160 FNCVKWASPTE-----FVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213
F + W+ P E + F G +++WD + K + K SG + S
Sbjct: 66 FYALAWSKPFEGRPRGLIAAAFENGVIEFWDAEVLIISKDLA--KASVHKSSKHSGPVRS 123
Query: 214 VDIHPSRKHTCLAGGSSGTVFAWDLR 239
+ +P + H ++GGS G +F WD +
Sbjct: 124 LQFNPLQSHVLVSGGSHGQIFIWDTK 149
>gi|409083812|gb|EKM84169.1| hypothetical protein AGABI1DRAFT_104127 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 507
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 161 NCVKWASPTE--FVTGGFGYGLQWWDLR---RAGSGGPVLQFKGNFGSQGKASGMIHSVD 215
N + W T V+GG G++ WDLR + GSG P +F K I S++
Sbjct: 364 NVISWNRTTTNLLVSGGDDGGIKAWDLRNVKKKGSGEPDPTPVAHFAWHSKP---ITSIE 420
Query: 216 IHPSRKHTCLAGGSSGTVFAWDL 238
HP+ A G+ V WDL
Sbjct: 421 WHPTEDSIFAASGADDQVTLWDL 443
>gi|426201129|gb|EKV51052.1| hypothetical protein AGABI2DRAFT_213648 [Agaricus bisporus var.
bisporus H97]
Length = 475
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 161 NCVKWASPTE--FVTGGFGYGLQWWDLR---RAGSGGPVLQFKGNFGSQGKASGMIHSVD 215
N + W T V+GG G++ WDLR + GSG P +F K I S++
Sbjct: 332 NVISWNRTTTNLLVSGGDDGGIKAWDLRNVKKKGSGEPDPTPVAHFAWHSKP---ITSIE 388
Query: 216 IHPSRKHTCLAGGSSGTVFAWDL 238
HP+ A G+ V WDL
Sbjct: 389 WHPTEDSIFAASGADDQVTLWDL 411
>gi|302817951|ref|XP_002990650.1| hypothetical protein SELMODRAFT_132143 [Selaginella moellendorffii]
gi|300141572|gb|EFJ08282.1| hypothetical protein SELMODRAFT_132143 [Selaginella moellendorffii]
Length = 357
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 171 FVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS 230
V G L+ WDLR V Q +G + +D +P R+HT + G
Sbjct: 174 IVATACGTSLKCWDLRTMKEASTVDQ---------AHAGQVRDLDYNPKRQHTIVTSGDD 224
Query: 231 GTVFAWDLR 239
V WDLR
Sbjct: 225 SKVRVWDLR 233
>gi|281206422|gb|EFA80609.1| hypothetical protein PPL_06548 [Polysphondylium pallidum PN500]
Length = 1568
Score = 37.7 bits (86), Expect = 8.1, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 24 VRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQS 83
+ W+P + L+ L L++Y D D LPASLT ISS+S S ++
Sbjct: 774 LSWIPFIKSLNNLTTLSLYQNDIDDSYYTVDFADLPASLTDLDIQASCLLISSISPSIRN 833
Query: 84 LVAAST 89
L AST
Sbjct: 834 LDIAST 839
>gi|327280685|ref|XP_003225082.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
[Anolis carolinensis]
Length = 461
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 161 NCVKWASPTEF-VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
N + W F V+GG L+ WDLR+ G V FK + + I SV+ HP+
Sbjct: 329 NVISWNRNEPFIVSGGDDGALKIWDLRQFQKGSAVATFK-------QHTAPITSVEWHPT 381
Query: 220 RKHTCLAGGSSGTVFAWDL 238
A G+ V WDL
Sbjct: 382 DSGVFAASGADDQVTQWDL 400
>gi|294925302|ref|XP_002778890.1| hypothetical protein Pmar_PMAR000718 [Perkinsus marinus ATCC 50983]
gi|239887736|gb|EER10685.1| hypothetical protein Pmar_PMAR000718 [Perkinsus marinus ATCC 50983]
Length = 527
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 155 NGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSV 214
+G+ C+ W+ + GG G+ Q R G G K +G A SV
Sbjct: 58 SGIDKCTCICWSGNGLVLAGGLGFREQ-----RGGWGAG----KDTVMEEGGAKQNATSV 108
Query: 215 DIHPSRKHTCLAGGSSGTVFAWDLRWQQQSI 245
IHP R AG S G V+ WDL +S+
Sbjct: 109 SIHPHRPSVLAAGTSYGQVYVWDLERSGESM 139
>gi|18676879|dbj|BAB85046.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 19/86 (22%)
Query: 211 IHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQY 270
+H VD HP+++H GG G + WD+R Q ++ +S + EA E+WEV +
Sbjct: 16 LHCVDRHPNQQHVVATGGQDGMLSIWDVR--QGTMPVSLLKAHEA--------EMWEVHF 65
Query: 271 DCHTKSSNISSSRVLPAMFCSEDGIL 296
S CSEDG L
Sbjct: 66 ---------HPSNPEHLFTCSEDGSL 82
>gi|28277328|gb|AAH44118.1| Grwd-pending-prov protein [Xenopus laevis]
Length = 430
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 161 NCVKWASPTEFVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
N + W F+ G G L+ WDLR+ G V +FK Q KA I SV+ HP+
Sbjct: 296 NVISWNHQEPFIVSGGDDGVLKIWDLRQFQKGVSVAKFK-----QHKAP--ITSVEWHPT 348
Query: 220 RKHTCLAGGSSGTVFAWDL 238
A G+ + WDL
Sbjct: 349 DSGVFAASGADDQITQWDL 367
>gi|68476271|ref|XP_717785.1| potential spliceosomal factor Prp46 [Candida albicans SC5314]
gi|68476460|ref|XP_717691.1| potential spliceosomal factor Prp46 [Candida albicans SC5314]
gi|73921815|sp|Q5A7Q3.1|PRP46_CANAL RecName: Full=Pre-mRNA-splicing factor PRP46; AltName:
Full=Pre-mRNA-processing protein 46
gi|46439416|gb|EAK98734.1| potential spliceosomal factor Prp46 [Candida albicans SC5314]
gi|46439517|gb|EAK98834.1| potential spliceosomal factor Prp46 [Candida albicans SC5314]
Length = 389
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 162 CVKWASPTEFVTGGFGYGLQWWDLRRAGS--GGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
C+ P F +GG L+ WDL R+ S G + + G+ G ++S+ +HP
Sbjct: 135 CISKRHPYLF-SGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGG-------VYSIGLHPE 186
Query: 220 RKHTCLAGGSSGTVFAWDLRWQQQSIVLSG 249
+GG V WD+R + +++ L G
Sbjct: 187 LD-VLFSGGKDCVVRVWDIRSRVEAMTLLG 215
>gi|449016738|dbj|BAM80140.1| receptor for activated protein kinase C [Cyanidioschyzon merolae
strain 10D]
Length = 313
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 129 VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTE----FVTGGFGYGLQWWD 184
VS D + + +++G +++ V D + +CV+ SP+ FV+ G+ ++ WD
Sbjct: 121 VSASRDRTIKMWNILGQCKYEIVEDSH-TAWISCVR-LSPSPAVPCFVSCGWDKLVKVWD 178
Query: 185 LRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQS 244
L Q K N +G ++ V I P C +GG G+V WDL QQ
Sbjct: 179 L-------ATCQLKFNLVGH---TGYLNCVTISPD-GSLCASGGRDGSVMLWDL--QQGQ 225
Query: 245 IVLSGVGTGEAVTHSLSESEVW 266
+ + GT E S S W
Sbjct: 226 HLHTLEGTEEIYALCFSPSRYW 247
>gi|390604627|gb|EIN14018.1| glutamate-rich WD repeat-containing protein [Punctularia
strigosozonata HHB-11173 SS5]
Length = 513
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 161 NCVKWASPTEFV--TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP 218
N + W T ++ +GG G++ WDLR G S +G I S++ HP
Sbjct: 369 NVISWNKNTSYMLLSGGDEGGIKVWDLRNVQKRGSSTPSAAPVASFNWHTGPITSIEWHP 428
Query: 219 SRKHTCLAGGSSGTVFAWDLRWQQ 242
+ A G+ + WDL +Q
Sbjct: 429 TEDSIFAASGADDQITLWDLAVEQ 452
>gi|238880485|gb|EEQ44123.1| pre-mRNA splicing factor PRP46 [Candida albicans WO-1]
Length = 389
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 162 CVKWASPTEFVTGGFGYGLQWWDLRRAGS--GGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
C+ P F +GG L+ WDL R+ S G + + G+ G ++S+ +HP
Sbjct: 135 CISKRHPYLF-SGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGG-------VYSIGLHPE 186
Query: 220 RKHTCLAGGSSGTVFAWDLRWQQQSIVLSG 249
+GG V WD+R + +++ L G
Sbjct: 187 LD-VLFSGGKDCVVRVWDIRSRVEAMTLLG 215
>gi|410928552|ref|XP_003977664.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
[Takifugu rubripes]
Length = 434
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 161 NCVKWASPTEFVTGGFGYG-LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219
N + W F+ G G L+ WDLR+ SG PV FK + S + SV+ P+
Sbjct: 303 NVISWNRNEPFLLSGGDDGILKVWDLRQFKSGRPVANFK-------QHSSPVTSVEWSPA 355
Query: 220 RKHTCLAGGSSGTVFAWDL 238
A G+ V WDL
Sbjct: 356 DSSVFAASGADDVVSQWDL 374
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,993,027,613
Number of Sequences: 23463169
Number of extensions: 270264061
Number of successful extensions: 643502
Number of sequences better than 100.0: 352
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 642886
Number of HSP's gapped (non-prelim): 537
length of query: 343
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 200
effective length of database: 9,003,962,200
effective search space: 1800792440000
effective search space used: 1800792440000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)