Query 019258
Match_columns 343
No_of_seqs 252 out of 2607
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 13:19:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019258.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019258hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1.1E-40 3.7E-45 298.2 35.1 287 17-343 29-330 (344)
2 4g56_B MGC81050 protein; prote 100.0 1.9E-40 6.6E-45 298.3 32.7 294 16-343 40-342 (357)
3 3ow8_A WD repeat-containing pr 100.0 6.7E-40 2.3E-44 290.5 32.7 285 16-343 30-320 (321)
4 1vyh_C Platelet-activating fac 100.0 7.3E-39 2.5E-43 293.3 38.5 279 16-342 106-409 (410)
5 1got_B GT-beta; complex (GTP-b 100.0 1.4E-38 4.7E-43 284.2 36.6 282 16-341 53-340 (340)
6 2ynn_A Coatomer subunit beta'; 100.0 4.1E-38 1.4E-42 276.8 35.2 278 16-338 11-297 (304)
7 2pbi_B Guanine nucleotide-bind 100.0 2.6E-37 8.8E-42 277.6 35.1 282 16-341 62-354 (354)
8 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.4E-37 2.5E-41 273.6 36.1 295 16-342 13-333 (345)
9 4gqb_B Methylosome protein 50; 100.0 3.9E-37 1.3E-41 275.2 31.5 245 17-305 81-333 (344)
10 2hes_X YDR267CP; beta-propelle 100.0 1.6E-36 5.6E-41 269.7 34.6 284 16-342 12-326 (330)
11 3iz6_a 40S ribosomal protein R 100.0 2.8E-37 9.6E-42 279.9 29.4 288 16-341 64-372 (380)
12 3frx_A Guanine nucleotide-bind 100.0 2.8E-36 9.7E-41 266.9 34.5 277 16-341 15-314 (319)
13 2xzm_R RACK1; ribosome, transl 100.0 4.2E-35 1.4E-39 261.9 36.2 281 16-341 19-337 (343)
14 1erj_A Transcriptional repress 100.0 9.7E-35 3.3E-39 264.4 36.4 297 15-341 61-386 (393)
15 4ery_A WD repeat-containing pr 100.0 2.2E-34 7.5E-39 253.5 37.4 280 16-342 21-310 (312)
16 4aow_A Guanine nucleotide-bind 100.0 3.6E-34 1.2E-38 254.3 36.9 279 16-341 36-334 (340)
17 1gxr_A ESG1, transducin-like e 100.0 4.5E-34 1.6E-38 253.0 37.3 283 11-341 44-334 (337)
18 2pm9_A Protein WEB1, protein t 100.0 1.4E-35 4.9E-40 270.7 26.9 297 12-342 6-335 (416)
19 2ynn_A Coatomer subunit beta'; 100.0 2.6E-34 8.9E-39 252.5 32.0 239 69-342 11-257 (304)
20 1k8k_C P40, ARP2/3 complex 41 100.0 4E-34 1.4E-38 257.1 33.6 287 12-341 3-358 (372)
21 2pm7_B Protein transport prote 100.0 5.5E-34 1.9E-38 249.6 33.4 251 15-302 6-284 (297)
22 2pm9_A Protein WEB1, protein t 100.0 7.6E-35 2.6E-39 265.9 28.0 291 11-341 60-411 (416)
23 4g56_B MGC81050 protein; prote 100.0 1.3E-34 4.4E-39 260.3 28.8 244 16-303 92-343 (357)
24 4e54_B DNA damage-binding prot 100.0 4.3E-34 1.5E-38 263.6 30.2 300 16-342 117-428 (435)
25 1nr0_A Actin interacting prote 100.0 2.5E-33 8.5E-38 269.3 36.6 291 16-342 188-565 (611)
26 3dm0_A Maltose-binding peripla 100.0 2.7E-33 9.4E-38 272.8 36.7 279 16-342 380-691 (694)
27 3ow8_A WD repeat-containing pr 100.0 2.1E-33 7.3E-38 248.7 32.5 238 16-301 78-319 (321)
28 1vyh_C Platelet-activating fac 100.0 2E-33 6.7E-38 257.2 33.2 237 16-301 148-409 (410)
29 2j04_B YDR362CP, TAU91; beta p 100.0 4.6E-35 1.6E-39 275.0 22.1 300 11-341 126-514 (524)
30 1got_B GT-beta; complex (GTP-b 100.0 4.7E-33 1.6E-37 248.3 32.8 241 16-300 95-340 (340)
31 2ymu_A WD-40 repeat protein; u 100.0 9.7E-33 3.3E-37 262.8 36.9 272 16-341 301-577 (577)
32 1nr0_A Actin interacting prote 100.0 5.7E-33 1.9E-37 266.8 35.2 294 16-341 57-394 (611)
33 2pm7_B Protein transport prote 100.0 6.4E-33 2.2E-37 242.8 32.1 243 68-341 6-282 (297)
34 4gga_A P55CDC, cell division c 100.0 2.6E-32 8.7E-37 250.5 37.0 279 19-342 106-393 (420)
35 3iz6_a 40S ribosomal protein R 100.0 3.3E-33 1.1E-37 253.2 30.5 257 16-303 106-375 (380)
36 4aez_A CDC20, WD repeat-contai 100.0 1.2E-32 4.2E-37 251.1 34.4 273 21-342 96-378 (401)
37 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.9E-33 3E-37 247.1 32.8 259 15-304 58-336 (345)
38 3i2n_A WD repeat-containing pr 100.0 1.4E-33 4.7E-38 252.0 26.7 285 16-341 16-350 (357)
39 3k26_A Polycomb protein EED; W 100.0 1.5E-33 5.1E-38 252.5 26.9 300 16-342 16-364 (366)
40 3dwl_C Actin-related protein 2 100.0 4.9E-34 1.7E-38 257.6 23.3 293 11-341 5-376 (377)
41 3ei3_B DNA damage-binding prot 100.0 3.5E-32 1.2E-36 246.2 35.4 288 16-342 71-380 (383)
42 3gre_A Serine/threonine-protei 100.0 4.7E-33 1.6E-37 256.3 29.6 295 16-341 61-437 (437)
43 1sq9_A Antiviral protein SKI8; 100.0 9.6E-33 3.3E-37 250.6 30.4 288 16-341 14-392 (397)
44 3vl1_A 26S proteasome regulato 100.0 2.9E-32 9.9E-37 249.4 33.4 280 20-341 58-362 (420)
45 3zwl_B Eukaryotic translation 100.0 1.7E-31 5.8E-36 239.2 36.5 279 15-342 29-344 (369)
46 2pbi_B Guanine nucleotide-bind 100.0 5.4E-32 1.9E-36 242.9 32.9 240 17-300 105-354 (354)
47 3bg1_A Protein SEC13 homolog; 100.0 5.1E-34 1.7E-38 252.1 18.8 246 16-302 11-292 (316)
48 3frx_A Guanine nucleotide-bind 100.0 7.1E-32 2.4E-36 238.6 32.6 238 68-341 14-264 (319)
49 3vl1_A 26S proteasome regulato 100.0 3.9E-32 1.3E-36 248.5 31.9 278 19-342 98-417 (420)
50 3bg1_A Protein SEC13 homolog; 100.0 8E-33 2.7E-37 244.4 26.2 243 68-342 10-291 (316)
51 3odt_A Protein DOA1; ubiquitin 100.0 4.7E-32 1.6E-36 237.7 30.8 274 16-342 16-294 (313)
52 2hes_X YDR267CP; beta-propelle 100.0 4E-32 1.4E-36 241.3 30.5 248 17-302 57-327 (330)
53 1gxr_A ESG1, transducin-like e 100.0 7E-32 2.4E-36 238.9 31.6 280 16-342 7-294 (337)
54 2ymu_A WD-40 repeat protein; u 100.0 2.4E-31 8.2E-36 253.2 37.2 273 16-342 260-537 (577)
55 3dw8_B Serine/threonine-protei 100.0 4.6E-32 1.6E-36 249.9 31.0 289 15-341 25-443 (447)
56 1r5m_A SIR4-interacting protei 100.0 4.2E-32 1.4E-36 247.7 30.2 275 17-342 107-423 (425)
57 4ggc_A P55CDC, cell division c 100.0 4.3E-31 1.5E-35 232.2 35.4 275 20-342 27-313 (318)
58 2xyi_A Probable histone-bindin 100.0 7.2E-32 2.5E-36 248.3 28.9 302 13-342 40-408 (430)
59 1r5m_A SIR4-interacting protei 100.0 1.6E-31 5.4E-36 243.9 30.8 281 13-342 40-359 (425)
60 4ery_A WD repeat-containing pr 100.0 1.9E-30 6.6E-35 228.3 34.3 239 68-342 20-266 (312)
61 2xzm_R RACK1; ribosome, transl 100.0 2.5E-30 8.6E-35 230.9 33.8 250 16-302 74-339 (343)
62 1p22_A F-BOX/WD-repeat protein 100.0 4.3E-30 1.5E-34 236.7 35.5 268 16-341 131-411 (435)
63 3jrp_A Fusion protein of prote 100.0 1.1E-30 3.8E-35 234.9 30.6 250 16-302 9-286 (379)
64 1erj_A Transcriptional repress 100.0 2.2E-30 7.6E-35 235.6 32.5 244 20-302 125-388 (393)
65 4a11_B DNA excision repair pro 100.0 1.1E-29 3.6E-34 230.7 35.7 292 16-341 41-362 (408)
66 2xyi_A Probable histone-bindin 100.0 1.2E-30 4E-35 240.2 28.9 255 12-303 122-410 (430)
67 3v7d_B Cell division control p 100.0 6.8E-30 2.3E-34 236.9 33.6 272 16-342 119-419 (464)
68 3v7d_B Cell division control p 100.0 8.6E-30 3E-34 236.3 34.2 272 16-340 160-459 (464)
69 1yfq_A Cell cycle arrest prote 100.0 6.5E-31 2.2E-35 233.6 25.3 280 16-336 9-315 (342)
70 3jrp_A Fusion protein of prote 100.0 7.7E-30 2.6E-34 229.4 32.5 244 68-341 8-284 (379)
71 3mkq_A Coatomer beta'-subunit; 100.0 3.7E-30 1.3E-34 254.6 32.8 279 16-341 11-299 (814)
72 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-29 5.7E-34 260.8 38.5 246 15-301 612-911 (1249)
73 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.8E-29 1.7E-33 230.2 35.3 257 33-342 128-389 (445)
74 2aq5_A Coronin-1A; WD40 repeat 100.0 5.3E-30 1.8E-34 233.6 28.4 277 23-341 39-339 (402)
75 4h5i_A Guanine nucleotide-exch 100.0 3.2E-29 1.1E-33 225.7 33.1 297 11-343 7-342 (365)
76 4e54_B DNA damage-binding prot 100.0 1.2E-30 4E-35 240.6 23.9 204 69-303 117-327 (435)
77 3mmy_A MRNA export factor; mRN 100.0 9E-30 3.1E-34 227.9 28.6 277 16-335 37-337 (368)
78 1k8k_C P40, ARP2/3 complex 41 100.0 2.7E-29 9.3E-34 225.5 30.7 255 16-302 50-360 (372)
79 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-28 4E-33 227.7 35.3 272 16-341 157-439 (445)
80 3i2n_A WD repeat-containing pr 100.0 3.4E-29 1.2E-33 223.5 30.0 262 12-303 59-353 (357)
81 3f3f_A Nucleoporin SEH1; struc 100.0 2.9E-29 1E-33 222.3 29.3 248 16-303 9-337 (351)
82 3k26_A Polycomb protein EED; W 100.0 2.9E-30 9.8E-35 231.1 22.8 244 17-301 68-364 (366)
83 4aez_A CDC20, WD repeat-contai 100.0 3.9E-29 1.3E-33 227.9 30.6 244 13-303 129-380 (401)
84 3dm0_A Maltose-binding peripla 100.0 2.4E-29 8.3E-34 245.0 30.9 242 68-342 379-630 (694)
85 3f3f_A Nucleoporin SEH1; struc 100.0 7.5E-29 2.6E-33 219.6 30.2 251 68-342 8-335 (351)
86 4aow_A Guanine nucleotide-bind 100.0 1.9E-28 6.7E-33 217.2 32.4 247 16-302 84-336 (340)
87 1pgu_A Actin interacting prote 100.0 1.7E-28 5.9E-33 234.7 34.3 289 17-341 202-611 (615)
88 2oaj_A Protein SNI1; WD40 repe 100.0 8.5E-29 2.9E-33 247.0 30.7 208 13-238 53-310 (902)
89 2j04_B YDR362CP, TAU91; beta p 100.0 1E-29 3.5E-34 238.6 22.6 243 67-341 129-425 (524)
90 4gga_A P55CDC, cell division c 100.0 4.8E-28 1.6E-32 222.1 32.0 240 16-303 145-395 (420)
91 3sfz_A APAF-1, apoptotic pepti 100.0 4.8E-29 1.6E-33 257.4 27.3 284 17-343 960-1248(1249)
92 3vu4_A KMHSV2; beta-propeller 100.0 5.5E-28 1.9E-32 216.8 30.7 270 15-341 16-333 (355)
93 3odt_A Protein DOA1; ubiquitin 100.0 1.6E-27 5.6E-32 208.7 32.9 235 16-303 57-296 (313)
94 3dwl_C Actin-related protein 2 100.0 6.5E-29 2.2E-33 224.0 24.4 256 16-300 53-376 (377)
95 3jro_A Fusion protein of prote 100.0 3E-28 1E-32 239.2 31.1 243 68-341 6-282 (753)
96 3ei3_B DNA damage-binding prot 100.0 7.7E-28 2.6E-32 217.6 31.3 238 68-342 70-337 (383)
97 3dw8_B Serine/threonine-protei 100.0 1.5E-28 5.3E-33 226.3 27.0 250 67-342 24-371 (447)
98 1sq9_A Antiviral protein SKI8; 100.0 2.6E-28 8.9E-33 221.3 27.6 254 16-302 60-394 (397)
99 1pgu_A Actin interacting prote 100.0 6.2E-28 2.1E-32 230.9 31.2 278 16-342 16-326 (615)
100 3jro_A Fusion protein of prote 100.0 7.4E-29 2.5E-33 243.6 25.2 250 16-302 7-284 (753)
101 2oaj_A Protein SNI1; WD40 repe 100.0 9.5E-28 3.3E-32 239.4 32.3 300 11-341 10-380 (902)
102 3zwl_B Eukaryotic translation 100.0 5.5E-27 1.9E-31 209.8 33.5 238 65-335 26-281 (369)
103 1p22_A F-BOX/WD-repeat protein 100.0 1E-27 3.5E-32 220.8 29.1 254 16-321 171-433 (435)
104 4h5i_A Guanine nucleotide-exch 100.0 2.9E-28 9.8E-33 219.5 24.4 244 17-303 72-343 (365)
105 4gq1_A NUP37; propeller, trans 100.0 3.8E-28 1.3E-32 220.9 25.2 304 11-340 8-385 (393)
106 4a11_B DNA excision repair pro 100.0 1.4E-27 4.6E-32 216.8 28.7 283 17-343 98-404 (408)
107 3lrv_A PRE-mRNA-splicing facto 100.0 6.9E-28 2.4E-32 215.0 26.0 264 33-340 47-329 (343)
108 3gre_A Serine/threonine-protei 100.0 2.6E-28 8.9E-33 224.6 23.8 263 12-300 105-437 (437)
109 1yfq_A Cell cycle arrest prote 100.0 8.1E-28 2.8E-32 213.6 25.8 240 69-342 9-280 (342)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-27 6.2E-32 216.8 27.7 250 16-302 79-341 (402)
111 3mkq_A Coatomer beta'-subunit; 100.0 4.5E-27 1.5E-31 232.5 30.3 240 68-342 10-257 (814)
112 4ggc_A P55CDC, cell division c 100.0 2.2E-26 7.6E-31 202.0 30.7 241 16-303 65-315 (318)
113 2j04_A TAU60, YPL007P, hypothe 100.0 2.8E-27 9.7E-32 218.7 24.4 264 12-341 9-294 (588)
114 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-26 3.7E-31 214.9 28.2 236 70-331 101-371 (450)
115 3bws_A Protein LP49; two-domai 100.0 1.2E-25 4.2E-30 206.3 31.9 283 11-342 115-430 (433)
116 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-26 8.4E-31 205.0 24.8 222 81-341 47-289 (343)
117 1l0q_A Surface layer protein; 99.9 8E-25 2.8E-29 198.1 32.1 259 35-342 3-273 (391)
118 3mmy_A MRNA export factor; mRN 99.9 8.1E-25 2.8E-29 195.6 31.6 240 68-342 36-302 (368)
119 4gq1_A NUP37; propeller, trans 99.9 2E-26 6.7E-31 209.6 20.6 252 13-297 64-384 (393)
120 2vdu_B TRNA (guanine-N(7)-)-me 99.9 8.7E-25 3E-29 202.2 29.9 233 16-273 100-365 (450)
121 2j04_A TAU60, YPL007P, hypothe 99.9 1.5E-25 5E-30 207.3 23.7 253 16-333 50-350 (588)
122 3vu4_A KMHSV2; beta-propeller 99.9 2.5E-24 8.5E-29 193.0 27.1 228 68-342 16-269 (355)
123 1l0q_A Surface layer protein; 99.9 1.9E-22 6.6E-27 182.4 33.9 242 11-303 24-275 (391)
124 2w18_A PALB2, fancn, partner a 99.9 4.1E-23 1.4E-27 180.0 27.5 282 20-341 41-354 (356)
125 3bws_A Protein LP49; two-domai 99.9 2.8E-23 9.7E-28 190.5 28.0 243 65-342 116-388 (433)
126 2w18_A PALB2, fancn, partner a 99.9 3.7E-23 1.3E-27 180.2 23.6 185 82-301 144-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.6E-22 2.9E-26 180.2 24.9 279 19-341 63-384 (415)
128 1ri6_A Putative isomerase YBHE 99.9 8.9E-20 3E-24 161.4 26.0 274 35-341 6-305 (343)
129 2ojh_A Uncharacterized protein 99.9 8.7E-20 3E-24 157.6 22.2 245 50-334 23-292 (297)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.9E-18 6.5E-23 158.0 30.2 246 34-323 143-408 (415)
131 2oit_A Nucleoporin 214KDA; NH2 99.8 3.9E-19 1.3E-23 163.4 24.9 208 18-241 36-279 (434)
132 1nir_A Nitrite reductase; hemo 99.8 1.2E-18 4.1E-23 164.5 28.4 291 11-341 171-511 (543)
133 3vgz_A Uncharacterized protein 99.8 4.6E-18 1.6E-22 151.1 29.1 285 11-333 33-333 (353)
134 1ri6_A Putative isomerase YBHE 99.8 7.4E-18 2.5E-22 149.0 27.6 258 11-302 30-307 (343)
135 3u4y_A Uncharacterized protein 99.8 3.6E-17 1.2E-21 144.3 30.8 267 33-342 9-302 (331)
136 2ecf_A Dipeptidyl peptidase IV 99.8 2.6E-18 8.9E-23 168.3 25.6 283 18-341 36-410 (741)
137 2z3z_A Dipeptidyl aminopeptida 99.8 3.9E-18 1.3E-22 166.1 26.5 277 19-341 82-432 (706)
138 1nir_A Nitrite reductase; hemo 99.8 1.6E-17 5.6E-22 156.7 28.6 268 33-342 148-456 (543)
139 1xfd_A DIP, dipeptidyl aminope 99.8 3.3E-18 1.1E-22 167.0 23.3 281 19-341 17-390 (723)
140 2oit_A Nucleoporin 214KDA; NH2 99.8 5.3E-18 1.8E-22 155.9 22.0 204 72-302 37-277 (434)
141 2ecf_A Dipeptidyl peptidase IV 99.8 3.4E-17 1.1E-21 160.4 26.9 277 20-341 110-456 (741)
142 2ojh_A Uncharacterized protein 99.8 2.5E-17 8.7E-22 142.0 22.9 217 88-341 18-255 (297)
143 1pby_B Quinohemoprotein amine 99.8 2E-17 6.7E-22 145.9 20.7 260 35-341 2-307 (337)
144 3hfq_A Uncharacterized protein 99.8 2E-16 7E-21 140.6 26.6 279 36-341 4-314 (347)
145 3o4h_A Acylamino-acid-releasin 99.8 9E-17 3.1E-21 153.1 23.4 264 19-341 22-312 (582)
146 1xfd_A DIP, dipeptidyl aminope 99.8 5E-16 1.7E-20 151.5 27.9 273 20-332 62-428 (723)
147 1k32_A Tricorn protease; prote 99.7 4E-16 1.4E-20 158.5 26.2 280 17-341 294-634 (1045)
148 3scy_A Hypothetical bacterial 99.7 6.5E-15 2.2E-19 131.6 29.8 280 34-341 13-334 (361)
149 3hfq_A Uncharacterized protein 99.7 2.2E-15 7.5E-20 133.9 26.3 255 15-301 36-315 (347)
150 2z3z_A Dipeptidyl aminopeptida 99.7 2.4E-15 8.1E-20 146.5 27.3 246 16-304 118-436 (706)
151 3u4y_A Uncharacterized protein 99.7 6.8E-15 2.3E-19 129.6 27.3 227 82-341 10-249 (331)
152 1k32_A Tricorn protease; prote 99.7 1E-15 3.5E-20 155.4 24.3 285 16-341 50-406 (1045)
153 3vgz_A Uncharacterized protein 99.7 1.4E-14 4.9E-19 128.4 26.5 240 69-342 38-301 (353)
154 3scy_A Hypothetical bacterial 99.7 3.7E-14 1.3E-18 126.7 28.7 251 17-302 48-336 (361)
155 1pby_B Quinohemoprotein amine 99.7 1.1E-14 3.8E-19 128.1 23.1 237 11-303 23-310 (337)
156 1jmx_B Amine dehydrogenase; ox 99.7 2.7E-14 9.3E-19 126.4 24.5 239 77-342 5-323 (349)
157 1jmx_B Amine dehydrogenase; ox 99.7 8E-15 2.7E-19 129.8 20.1 230 33-303 10-325 (349)
158 3o4h_A Acylamino-acid-releasin 99.6 1.3E-14 4.4E-19 138.2 21.1 228 71-341 21-273 (582)
159 3pe7_A Oligogalacturonate lyas 99.6 1.5E-12 5E-17 117.2 27.7 273 24-341 41-381 (388)
160 1z68_A Fibroblast activation p 99.6 1.9E-14 6.6E-19 140.4 15.6 272 22-340 19-387 (719)
161 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.8E-12 6.2E-17 116.1 26.5 244 72-341 40-338 (365)
162 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.6E-12 5.5E-17 116.4 25.4 257 19-304 40-342 (365)
163 1q7f_A NHL, brain tumor CG1071 99.6 1.1E-11 3.9E-16 106.7 29.4 237 70-341 28-277 (286)
164 3fvz_A Peptidyl-glycine alpha- 99.5 1.2E-11 4.2E-16 109.1 28.1 245 71-341 23-319 (329)
165 1z68_A Fibroblast activation p 99.5 6E-13 2E-17 129.8 21.2 276 21-341 62-440 (719)
166 1q7f_A NHL, brain tumor CG1071 99.5 4.8E-11 1.6E-15 102.8 29.3 241 18-303 29-280 (286)
167 2dg1_A DRP35, lactonase; beta 99.5 2E-11 6.7E-16 107.6 26.7 272 19-334 6-300 (333)
168 3c5m_A Oligogalacturonate lyas 99.5 3.5E-11 1.2E-15 108.2 25.3 272 21-341 38-381 (396)
169 4a5s_A Dipeptidyl peptidase 4 99.5 1.5E-11 5.3E-16 120.4 24.2 249 20-305 18-355 (740)
170 3azo_A Aminopeptidase; POP fam 99.4 3E-11 1E-15 116.6 23.0 280 17-340 22-365 (662)
171 4a5s_A Dipeptidyl peptidase 4 99.4 6.1E-11 2.1E-15 116.1 25.2 243 72-341 17-350 (740)
172 3fvz_A Peptidyl-glycine alpha- 99.4 2E-09 6.8E-14 94.8 30.5 248 18-302 23-321 (329)
173 3pe7_A Oligogalacturonate lyas 99.4 1E-10 3.5E-15 105.1 22.5 227 77-341 41-326 (388)
174 3azo_A Aminopeptidase; POP fam 99.3 3E-10 1E-14 109.6 25.1 240 23-302 81-368 (662)
175 3dsm_A Uncharacterized protein 99.3 2.1E-09 7.1E-14 94.7 28.4 254 50-342 18-300 (328)
176 1rwi_B Serine/threonine-protei 99.3 8E-10 2.7E-14 94.0 24.9 231 73-342 25-262 (270)
177 3e5z_A Putative gluconolactona 99.3 9.3E-10 3.2E-14 95.2 25.6 230 71-340 27-282 (296)
178 2z2n_A Virginiamycin B lyase; 99.3 2.5E-08 8.7E-13 85.7 34.3 273 18-341 14-292 (299)
179 1rwi_B Serine/threonine-protei 99.3 8.7E-10 3E-14 93.8 24.1 236 20-304 25-265 (270)
180 2xdw_A Prolyl endopeptidase; a 99.3 3.9E-09 1.3E-13 102.8 29.8 275 33-341 82-411 (710)
181 3dsm_A Uncharacterized protein 99.3 2.3E-09 8E-14 94.4 25.2 239 19-305 44-304 (328)
182 2bkl_A Prolyl endopeptidase; m 99.3 1.2E-09 4E-14 106.2 25.1 251 20-309 122-403 (695)
183 2qc5_A Streptogramin B lactona 99.3 1.2E-07 4E-12 81.5 34.5 273 18-341 19-297 (300)
184 1xip_A Nucleoporin NUP159; bet 99.3 8.6E-09 2.9E-13 92.2 27.7 179 20-224 39-229 (388)
185 2xdw_A Prolyl endopeptidase; a 99.3 2.7E-09 9.3E-14 103.9 26.7 244 20-303 126-414 (710)
186 1xip_A Nucleoporin NUP159; bet 99.3 5.8E-10 2E-14 99.7 19.8 176 73-275 39-226 (388)
187 2gop_A Trilobed protease; beta 99.2 3.8E-09 1.3E-13 93.3 24.7 256 15-335 11-321 (347)
188 2gop_A Trilobed protease; beta 99.2 1.3E-09 4.3E-14 96.4 21.4 223 19-300 59-330 (347)
189 2oiz_A Aromatic amine dehydrog 99.2 3.1E-09 1.1E-13 94.9 24.0 269 11-322 43-357 (361)
190 2dg1_A DRP35, lactonase; beta 99.2 3E-09 1E-13 93.5 22.9 231 72-341 6-260 (333)
191 2bkl_A Prolyl endopeptidase; m 99.2 3.4E-09 1.2E-13 103.0 24.6 269 32-341 77-394 (695)
192 2z2n_A Virginiamycin B lyase; 99.2 8.7E-08 3E-12 82.3 31.1 232 72-341 15-252 (299)
193 3e5z_A Putative gluconolactona 99.2 6.4E-09 2.2E-13 89.9 23.9 234 17-302 26-285 (296)
194 3c5m_A Oligogalacturonate lyas 99.2 5.9E-10 2E-14 100.1 16.8 222 73-332 37-301 (396)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 3.2E-08 1.1E-12 85.9 26.6 236 73-341 19-296 (314)
196 3no2_A Uncharacterized protein 99.2 6.7E-09 2.3E-13 89.1 20.7 187 125-342 5-193 (276)
197 1yr2_A Prolyl oligopeptidase; 99.1 1E-08 3.5E-13 100.4 24.0 249 20-309 164-447 (741)
198 1qks_A Cytochrome CD1 nitrite 99.1 1.5E-07 5.3E-12 88.7 30.8 294 9-341 187-535 (567)
199 3no2_A Uncharacterized protein 99.1 4.3E-08 1.5E-12 84.0 24.0 215 81-332 4-231 (276)
200 2oiz_A Aromatic amine dehydrog 99.1 1.5E-08 5.3E-13 90.4 21.8 134 90-240 29-182 (361)
201 1yr2_A Prolyl oligopeptidase; 99.1 8.8E-08 3E-12 93.7 27.9 272 32-341 116-438 (741)
202 2qc5_A Streptogramin B lactona 99.1 5.9E-07 2E-11 77.1 29.8 232 72-341 20-257 (300)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 2.3E-07 7.8E-12 80.4 25.9 243 19-302 18-298 (314)
204 3hrp_A Uncharacterized protein 99.0 4.1E-07 1.4E-11 82.5 26.9 247 73-341 132-407 (409)
205 3g4e_A Regucalcin; six bladed 99.0 7.9E-07 2.7E-11 76.9 27.2 220 74-329 15-257 (297)
206 2ghs_A AGR_C_1268P; regucalcin 98.9 2.2E-06 7.4E-11 75.2 28.2 219 74-330 51-288 (326)
207 1qks_A Cytochrome CD1 nitrite 98.9 3E-07 1E-11 86.8 23.8 192 125-341 167-370 (567)
208 3g4e_A Regucalcin; six bladed 98.9 1E-06 3.5E-11 76.1 25.1 225 19-276 13-255 (297)
209 3iuj_A Prolyl endopeptidase; h 98.8 8.6E-07 2.9E-11 86.0 24.2 241 19-303 129-405 (693)
210 3dr2_A Exported gluconolactona 98.8 2.9E-06 9.8E-11 73.6 24.9 228 72-342 45-304 (305)
211 3sjl_D Methylamine dehydrogena 98.8 2.1E-06 7.1E-11 76.5 23.5 252 11-302 71-362 (386)
212 2mad_H Methylamine dehydrogena 98.8 2.1E-05 7.1E-10 70.3 28.7 254 11-302 59-349 (373)
213 3hrp_A Uncharacterized protein 98.8 2.6E-06 8.8E-11 77.2 22.9 198 116-341 131-351 (409)
214 2ghs_A AGR_C_1268P; regucalcin 98.7 8.8E-06 3E-10 71.3 24.7 217 20-275 50-284 (326)
215 3iuj_A Prolyl endopeptidase; h 98.7 4E-06 1.4E-10 81.3 22.5 235 70-341 127-402 (693)
216 3q7m_A Lipoprotein YFGL, BAMB; 98.6 2.7E-05 9.3E-10 69.3 25.5 221 82-342 143-376 (376)
217 2mad_H Methylamine dehydrogena 98.6 0.00028 9.6E-09 62.9 32.1 263 50-341 48-347 (373)
218 2qe8_A Uncharacterized protein 98.6 1.6E-05 5.3E-10 70.2 22.0 235 11-275 11-303 (343)
219 3dr2_A Exported gluconolactona 98.6 1.3E-05 4.5E-10 69.3 20.7 225 18-294 44-298 (305)
220 2qe8_A Uncharacterized protein 98.5 8.8E-06 3E-10 71.8 19.2 247 72-335 17-312 (343)
221 2hz6_A Endoplasmic reticulum t 98.5 2.6E-08 8.8E-13 89.2 2.1 181 81-302 8-191 (369)
222 2iwa_A Glutamine cyclotransfer 98.5 2.9E-05 1E-09 65.5 20.6 215 11-241 11-238 (266)
223 2hz6_A Endoplasmic reticulum t 98.5 8.8E-08 3E-12 85.7 4.3 179 124-342 8-190 (369)
224 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.0002 6.8E-09 63.6 25.4 229 81-341 52-293 (376)
225 3c75_H MADH, methylamine dehyd 98.4 3.4E-05 1.2E-09 69.9 20.1 255 10-303 110-402 (426)
226 2ece_A 462AA long hypothetical 98.4 0.00023 7.7E-09 64.3 25.0 296 15-332 22-399 (462)
227 3hxj_A Pyrrolo-quinoline quino 98.4 4.1E-05 1.4E-09 66.5 19.9 214 82-342 107-322 (330)
228 3hxj_A Pyrrolo-quinoline quino 98.4 1.6E-05 5.4E-10 69.2 17.2 274 6-341 6-281 (330)
229 3sjl_D Methylamine dehydrogena 98.3 0.00037 1.3E-08 62.0 24.6 284 32-341 42-360 (386)
230 2iwa_A Glutamine cyclotransfer 98.3 0.00078 2.7E-08 56.7 24.7 217 65-302 12-236 (266)
231 4a2l_A BT_4663, two-component 98.3 0.0021 7.2E-08 63.2 31.4 241 74-341 175-433 (795)
232 3mbr_X Glutamine cyclotransfer 98.3 0.00057 2E-08 56.6 22.6 199 65-276 12-217 (243)
233 3nok_A Glutaminyl cyclase; bet 98.3 0.0002 6.7E-09 60.0 19.6 198 65-276 46-248 (268)
234 3nok_A Glutaminyl cyclase; bet 98.3 0.00018 6.2E-09 60.2 19.2 191 117-340 56-262 (268)
235 3nol_A Glutamine cyclotransfer 98.2 0.00052 1.8E-08 57.4 21.6 199 65-276 34-238 (262)
236 4a2l_A BT_4663, two-component 98.2 0.0057 1.9E-07 60.1 34.8 246 71-341 214-477 (795)
237 3nol_A Glutamine cyclotransfer 98.2 0.0003 1E-08 58.8 19.6 190 118-340 45-252 (262)
238 3mbr_X Glutamine cyclotransfer 98.2 0.00039 1.3E-08 57.6 20.0 199 11-227 11-222 (243)
239 1npe_A Nidogen, entactin; glyc 98.2 0.0014 4.7E-08 55.2 24.3 191 117-341 37-235 (267)
240 1yiq_A Quinohemoprotein alcoho 98.1 0.00052 1.8E-08 66.4 22.2 161 81-244 120-342 (689)
241 1kb0_A Quinohemoprotein alcoho 98.1 0.0009 3.1E-08 64.5 23.6 163 81-247 127-353 (677)
242 2fp8_A Strictosidine synthase; 98.0 0.0054 1.8E-07 53.1 26.2 232 74-341 21-310 (322)
243 1mda_H Methylamine dehydrogena 98.0 0.00023 8E-09 63.2 16.2 269 9-321 56-365 (368)
244 3v65_B Low-density lipoprotein 98.0 0.0077 2.6E-07 53.8 26.6 221 83-342 88-316 (386)
245 1npe_A Nidogen, entactin; glyc 98.0 0.002 6.7E-08 54.2 21.0 182 127-341 3-195 (267)
246 2ece_A 462AA long hypothetical 98.0 0.00072 2.5E-08 61.0 18.6 188 127-341 98-349 (462)
247 1kb0_A Quinohemoprotein alcoho 98.0 0.0018 6.3E-08 62.4 22.8 141 136-302 284-506 (677)
248 3c75_H MADH, methylamine dehyd 97.9 0.0016 5.3E-08 58.9 19.6 136 135-301 99-246 (426)
249 1ijq_A LDL receptor, low-densi 97.8 0.012 4.3E-07 50.8 27.6 220 85-342 4-236 (316)
250 1yiq_A Quinohemoprotein alcoho 97.8 0.0017 5.9E-08 62.7 19.6 160 76-248 239-513 (689)
251 1k3i_A Galactose oxidase precu 97.8 0.0054 1.8E-07 58.9 22.8 112 33-146 197-325 (656)
252 1fwx_A Nitrous oxide reductase 97.7 0.0058 2E-07 57.1 20.6 188 81-303 100-361 (595)
253 3v64_C Agrin; beta propeller, 97.7 0.022 7.4E-07 50.1 27.5 229 75-342 37-273 (349)
254 3v64_C Agrin; beta propeller, 97.7 0.023 7.9E-07 49.9 23.7 177 132-341 50-231 (349)
255 3p5b_L Low density lipoprotein 97.6 0.033 1.1E-06 49.9 27.1 222 83-342 84-318 (400)
256 2xe4_A Oligopeptidase B; hydro 97.6 0.021 7.3E-07 55.7 24.0 198 20-238 175-398 (751)
257 1ijq_A LDL receptor, low-densi 97.6 0.033 1.1E-06 48.1 22.7 180 133-341 8-192 (316)
258 3v9f_A Two-component system se 97.5 0.077 2.6E-06 51.9 32.5 237 72-341 258-521 (781)
259 3v9f_A Two-component system se 97.5 0.097 3.3E-06 51.2 34.0 238 72-340 363-607 (781)
260 2p4o_A Hypothetical protein; p 97.4 0.049 1.7E-06 46.6 25.9 233 65-331 25-275 (306)
261 1kv9_A Type II quinohemoprotei 97.4 0.018 6.3E-07 55.3 19.9 160 82-244 117-337 (668)
262 2ad6_A Methanol dehydrogenase 97.4 0.054 1.9E-06 51.0 22.8 162 81-247 114-342 (571)
263 3sov_A LRP-6, low-density lipo 97.4 0.061 2.1E-06 46.5 23.4 216 91-342 12-236 (318)
264 3m0c_C LDL receptor, low-densi 97.3 0.14 4.7E-06 50.1 27.6 216 90-342 402-630 (791)
265 1mda_H Methylamine dehydrogena 97.3 0.0066 2.2E-07 53.8 14.5 197 19-244 124-350 (368)
266 3qqz_A Putative uncharacterize 97.3 0.061 2.1E-06 44.8 24.3 207 116-342 27-251 (255)
267 2p4o_A Hypothetical protein; p 97.3 0.072 2.5E-06 45.5 26.0 201 11-239 24-241 (306)
268 2fp8_A Strictosidine synthase; 97.3 0.038 1.3E-06 47.6 19.1 183 119-332 22-247 (322)
269 3qqz_A Putative uncharacterize 97.2 0.079 2.7E-06 44.1 22.8 212 71-301 26-251 (255)
270 3v65_B Low-density lipoprotein 97.0 0.15 5.3E-06 45.2 28.4 196 71-301 115-316 (386)
271 1kv9_A Type II quinohemoprotei 97.0 0.031 1.1E-06 53.7 17.5 200 82-302 66-332 (668)
272 1fwx_A Nitrous oxide reductase 96.9 0.23 8E-06 46.4 21.4 184 125-341 101-358 (595)
273 2xbg_A YCF48-like protein; pho 96.9 0.18 6.2E-06 43.6 35.6 277 16-341 33-319 (327)
274 1k3i_A Galactose oxidase precu 96.8 0.048 1.6E-06 52.2 17.0 106 81-187 197-323 (656)
275 3sov_A LRP-6, low-density lipo 96.8 0.21 7.1E-06 43.1 26.5 194 72-301 35-236 (318)
276 2xn4_A Kelch-like protein 2; s 96.8 0.2 6.9E-06 42.5 19.7 195 33-241 61-277 (302)
277 2xe4_A Oligopeptidase B; hydro 96.7 0.27 9.2E-06 47.9 21.4 157 21-183 223-394 (751)
278 1n7d_A LDL receptor, low-densi 96.7 0.0092 3.1E-07 57.7 10.7 215 91-342 385-612 (699)
279 4a0p_A LRP6, LRP-6, low-densit 96.6 0.51 1.7E-05 44.9 27.6 221 84-342 8-235 (628)
280 3tc9_A Hypothetical hydrolase; 96.6 0.39 1.3E-05 43.3 24.8 152 74-240 139-301 (430)
281 3ei3_A DNA damage-binding prot 96.6 0.85 2.9E-05 46.6 30.3 183 17-223 552-751 (1158)
282 3tc9_A Hypothetical hydrolase; 96.4 0.2 6.7E-06 45.3 17.4 152 119-302 140-300 (430)
283 4hw6_A Hypothetical protein, I 96.4 0.49 1.7E-05 42.7 23.3 152 74-239 141-303 (433)
284 1w6s_A Methanol dehydrogenase 96.4 0.65 2.2E-05 43.9 22.2 158 85-247 124-349 (599)
285 3m0c_C LDL receptor, low-densi 96.4 0.84 2.9E-05 44.6 27.8 158 70-240 422-589 (791)
286 2ad6_A Methanol dehydrogenase 96.3 0.63 2.1E-05 43.7 20.4 114 82-199 62-194 (571)
287 2vpj_A Kelch-like protein 12; 96.2 0.45 1.5E-05 40.2 20.8 195 33-240 62-278 (301)
288 4hw6_A Hypothetical protein, I 96.1 0.78 2.7E-05 41.4 20.9 153 118-302 141-303 (433)
289 1n7d_A LDL receptor, low-densi 96.0 0.068 2.3E-06 51.6 12.5 154 72-240 406-571 (699)
290 1w6s_A Methanol dehydrogenase 95.8 0.85 2.9E-05 43.0 18.6 114 82-199 62-200 (599)
291 1flg_A Protein (quinoprotein e 95.8 1.3 4.6E-05 41.5 23.8 161 82-247 117-362 (582)
292 3amr_A 3-phytase; beta-propell 95.7 0.93 3.2E-05 39.4 20.6 187 126-342 41-261 (355)
293 3p5b_L Low density lipoprotein 95.7 1 3.6E-05 40.0 31.2 198 69-301 109-318 (400)
294 2p9w_A MAL S 1 allergenic prot 95.7 0.9 3.1E-05 39.2 16.9 163 119-302 16-214 (334)
295 3ii7_A Kelch-like protein 7; p 95.7 0.83 2.8E-05 38.6 18.7 193 33-240 55-272 (306)
296 1flg_A Protein (quinoprotein e 95.4 1.7 5.9E-05 40.8 20.5 60 177-248 465-524 (582)
297 1zgk_A Kelch-like ECH-associat 95.2 1.3 4.3E-05 37.6 17.5 194 33-240 70-287 (308)
298 2vpj_A Kelch-like protein 12; 94.9 1.5 5.1E-05 36.9 23.1 195 33-241 14-232 (301)
299 3pbp_A Nucleoporin NUP82; beta 94.2 3 0.0001 37.4 18.1 160 125-298 32-207 (452)
300 3kya_A Putative phosphatase; s 94.2 2.6 8.7E-05 38.7 16.4 156 118-302 141-340 (496)
301 3amr_A 3-phytase; beta-propell 93.9 2.9 0.0001 36.3 24.8 189 83-302 41-262 (355)
302 2p9w_A MAL S 1 allergenic prot 93.9 2.9 9.8E-05 36.1 22.2 161 74-241 15-216 (334)
303 1zgk_A Kelch-like ECH-associat 93.8 2.7 9.1E-05 35.5 18.5 194 33-241 24-241 (308)
304 2ism_A Putative oxidoreductase 93.6 2.2 7.5E-05 37.1 14.6 75 159-240 32-114 (352)
305 4a0p_A LRP6, LRP-6, low-densit 93.5 5.3 0.00018 37.9 28.1 156 72-241 37-198 (628)
306 2woz_A Kelch repeat and BTB do 93.4 3.2 0.00011 35.2 16.2 152 33-187 56-231 (318)
307 2xbg_A YCF48-like protein; pho 93.3 3.5 0.00012 35.3 28.4 229 71-340 35-275 (327)
308 3kya_A Putative phosphatase; s 93.2 5.1 0.00017 36.7 26.2 156 74-239 141-340 (496)
309 2xn4_A Kelch-like protein 2; s 92.8 3.8 0.00013 34.4 23.2 193 34-241 16-230 (302)
310 4asc_A Kelch repeat and BTB do 92.6 4.3 0.00015 34.3 18.7 152 33-187 45-221 (315)
311 3pbp_A Nucleoporin NUP82; beta 92.6 5.6 0.00019 35.6 18.7 151 81-236 31-208 (452)
312 3sre_A PON1, serum paraoxonase 92.5 5 0.00017 35.0 18.9 146 176-341 81-249 (355)
313 3ei3_A DNA damage-binding prot 92.4 11 0.00038 38.6 33.1 247 19-300 375-633 (1158)
314 3a9g_A Putative uncharacterize 92.1 5.6 0.00019 34.6 16.4 74 159-240 30-114 (354)
315 3sre_A PON1, serum paraoxonase 91.5 6.6 0.00023 34.2 19.0 154 74-240 52-252 (355)
316 3ii7_A Kelch-like protein 7; p 91.3 5.9 0.0002 33.2 24.1 191 34-241 12-226 (306)
317 2uvk_A YJHT; unknown function, 91.1 6.8 0.00023 33.7 20.9 98 33-134 19-128 (357)
318 3s94_A LRP-6, low-density lipo 90.7 11 0.00038 35.5 27.2 156 72-240 349-510 (619)
319 3s94_A LRP-6, low-density lipo 90.1 13 0.00044 35.1 27.7 191 116-341 349-548 (619)
320 1tl2_A L10, protein (tachylect 88.0 2.7 9.4E-05 34.0 8.4 112 209-342 41-161 (236)
321 2g8s_A Glucose/sorbosone dehyd 87.0 14 0.00048 31.9 13.7 77 159-239 19-106 (353)
322 2xzh_A Clathrin heavy chain 1; 86.9 14 0.00049 31.8 25.5 230 33-301 77-330 (365)
323 2uvk_A YJHT; unknown function, 85.8 16 0.00054 31.3 18.1 58 33-91 65-128 (357)
324 1sqj_A OXG-RCBH, oligoxylogluc 85.1 23 0.00078 34.5 15.0 167 159-339 16-196 (789)
325 1bpo_A Protein (clathrin); cla 83.9 24 0.00083 31.8 25.3 230 33-301 76-329 (494)
326 4asc_A Kelch repeat and BTB do 82.2 21 0.00072 29.9 19.1 149 80-241 44-222 (315)
327 3ott_A Two-component system se 81.8 38 0.0013 32.6 27.1 234 71-341 21-257 (758)
328 3b7f_A Glycosyl hydrolase, BNR 81.8 26 0.00088 30.6 20.2 199 125-340 22-258 (394)
329 3b7f_A Glycosyl hydrolase, BNR 79.0 32 0.0011 29.9 16.6 151 168-340 22-204 (394)
330 1cru_A Protein (soluble quinop 76.3 43 0.0015 30.1 17.3 106 159-275 28-156 (454)
331 2woz_A Kelch repeat and BTB do 74.9 36 0.0012 28.4 19.4 153 76-241 51-232 (318)
332 1xi4_A Clathrin heavy chain; a 73.0 98 0.0033 32.6 19.1 182 50-243 87-292 (1630)
333 2zwa_A Leucine carboxyl methyl 71.4 73 0.0025 30.4 18.3 150 33-187 397-577 (695)
334 2be1_A Serine/threonine-protei 70.3 12 0.00042 32.3 7.2 112 82-199 10-139 (339)
335 2cn3_A Xyloglucanase, beta-1,4 69.7 60 0.002 31.2 12.7 118 209-340 23-160 (737)
336 3a0f_A Xyloglucanase; beta-pro 69.3 74 0.0025 30.8 13.3 121 209-340 21-160 (763)
337 1sqj_A OXG-RCBH, oligoxylogluc 69.2 36 0.0012 33.2 11.1 117 209-339 15-147 (789)
338 3das_A Putative oxidoreductase 69.1 56 0.0019 28.2 11.4 59 209-273 32-90 (347)
339 2be1_A Serine/threonine-protei 68.5 28 0.00096 30.0 9.1 116 125-248 10-138 (339)
340 2zwa_A Leucine carboxyl methyl 66.0 94 0.0032 29.6 21.3 154 80-242 396-579 (695)
341 4gq2_M Nucleoporin NUP120; bet 65.2 1.1E+02 0.0039 30.4 15.3 36 159-197 237-273 (950)
342 3qhy_B Beta-lactamase inhibito 63.7 62 0.0021 26.8 23.7 219 72-342 24-244 (282)
343 3qhy_B Beta-lactamase inhibito 63.0 64 0.0022 26.7 22.1 238 20-322 25-263 (282)
344 1xi4_A Clathrin heavy chain; a 62.3 1.1E+02 0.0036 32.3 12.9 117 133-275 46-163 (1630)
345 3sbq_A Nitrous-oxide reductase 61.7 45 0.0015 31.1 9.2 84 209-302 323-407 (638)
346 1tl2_A L10, protein (tachylect 59.4 69 0.0023 25.8 14.9 118 159-302 42-162 (236)
347 3kci_A Probable E3 ubiquitin-p 56.2 1E+02 0.0034 26.8 28.2 235 74-342 55-343 (389)
348 3kci_A Probable E3 ubiquitin-p 55.2 1E+02 0.0036 26.7 24.9 192 82-302 10-240 (389)
349 2xzh_A Clathrin heavy chain 1; 52.4 1.2E+02 0.0039 26.3 25.7 100 82-187 78-189 (365)
350 2ism_A Putative oxidoreductase 51.8 1.1E+02 0.0039 26.0 22.3 102 73-175 32-153 (352)
351 3ott_A Two-component system se 50.7 1.7E+02 0.0059 27.9 33.3 225 72-335 63-299 (758)
352 4d9s_A UVB-resistance protein 45.4 1.5E+02 0.0053 25.8 29.6 233 73-342 69-355 (406)
353 3das_A Putative oxidoreductase 44.7 1.5E+02 0.0051 25.4 19.6 76 159-240 33-116 (347)
354 3f7f_A Nucleoporin NUP120; nuc 40.5 52 0.0018 31.6 6.4 35 117-152 223-257 (729)
355 2wg3_C Hedgehog-interacting pr 38.5 2.1E+02 0.0071 25.7 9.9 62 209-273 14-79 (463)
356 1bpo_A Protein (clathrin); cla 36.5 2.4E+02 0.0082 25.5 26.1 193 82-303 77-289 (494)
357 4gq2_M Nucleoporin NUP120; bet 36.2 1.9E+02 0.0065 28.8 10.1 34 117-151 237-272 (950)
358 3f6k_A Sortilin; protein sorti 28.5 3.4E+02 0.011 25.9 9.9 68 264-340 91-165 (685)
359 3a0f_A Xyloglucanase; beta-pro 28.4 4E+02 0.014 25.5 16.5 167 159-339 22-208 (763)
360 2wg3_C Hedgehog-interacting pr 27.9 3.3E+02 0.011 24.3 16.8 69 159-228 15-91 (463)
361 4fhn_B Nucleoporin NUP120; pro 27.6 1.8E+02 0.006 29.7 8.3 26 125-151 249-274 (1139)
362 3a9g_A Putative uncharacterize 26.4 3E+02 0.01 23.4 25.1 102 73-175 30-153 (354)
363 3f7f_A Nucleoporin NUP120; nuc 25.7 82 0.0028 30.2 5.1 36 160-199 224-259 (729)
364 2cn3_A Xyloglucanase, beta-1,4 24.5 1.9E+02 0.0064 27.7 7.6 60 264-332 24-91 (737)
365 4d9s_A UVB-resistance protein 23.2 3.6E+02 0.012 23.3 29.3 195 72-302 16-252 (406)
366 3sbq_A Nitrous-oxide reductase 22.5 4.8E+02 0.016 24.4 9.6 98 136-240 299-408 (638)
367 3q6k_A 43.2 kDa salivary prote 21.9 3.9E+02 0.014 23.2 16.4 152 179-341 124-303 (381)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=298.20 Aligned_cols=287 Identities=17% Similarity=0.118 Sum_probs=224.2
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeC-----CC----CCCCCCCccCCCCCCeeEEEccCCCeEEE
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSI-----SL----PASLTPHSQWTPPTRISSLSTSHQSLVAA 87 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~-----~~----~~~~~~~~~~~~~~~v~~v~~~~~~~l~~ 87 (343)
+...|.+++|+| ++.+|++++ |.+ +++|+. .. .....+.....+...|.+++|+.++.|++
T Consensus 29 ~~~~v~~~~fs~----dG~~l~~~s-d~~-----~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~ 98 (344)
T 4gqb_B 29 MERQLEAARYRS----DGALLLGAS-SLS-----GRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILV 98 (344)
T ss_dssp CCSEEEEEEECT----TSCEEEEEE-CCS-----SSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEE
T ss_pred ccCCEEEEEECC----CCCEEEEEe-CCc-----eEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEE
Confidence 446799999999 899999888 544 335542 11 11122333445677899999996688999
Q ss_pred EcCCCcEEEEEccCceeeeeec-cCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEE
Q 019258 88 STLSGSLHVLSSAMQVLLSVDE-NSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVK 164 (343)
Q Consensus 88 ~s~dg~v~v~~~~~~~~~~~~~-~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~ 164 (343)
|+.||+|+|||+..++.+.... ...+|.+.|++++|+ ++.|++++.|++|++||+++++ +...+..|.. .|.+++
T Consensus 99 ~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~-~~~~~~~h~~-~V~~~~ 176 (344)
T 4gqb_B 99 ASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV-VLSSYRAHAA-QVTCVA 176 (344)
T ss_dssp EETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSS-CEEEEE
T ss_pred EECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCcCC-ceEEEE
Confidence 9999999999998655443322 233699999999998 8999999999999999999984 6666677776 899999
Q ss_pred eCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCc
Q 019258 165 WAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ 242 (343)
Q Consensus 165 ~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~ 242 (343)
|++ ...|++++.|++|++||++. +++...+.... +...+.+++|+|.+..++++|+.||+|++||+++.+
T Consensus 177 ~~~~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 177 ASPHKDSVFLSCSEDNRILLWDTRC---PKPASQIGCSA-----PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTS---SSCEEECC---------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred ecCCCCCceeeeccccccccccccc---cceeeeeecce-----eeccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 998 45789999999999999998 77776654322 115699999999888889999999999999999865
Q ss_pred eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-cccccccccccceeeec
Q 019258 243 QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFELLAEPCAINSFDID 321 (343)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~~~~~~~i~s~~~~ 321 (343)
....+ .+|...|++|+|+|++.. +|++||.||+|++||.... ...+..+...|++++|+
T Consensus 249 ~~~~~-----------~~h~~~v~~v~fsp~g~~---------~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~s 308 (344)
T 4gqb_B 249 CVLSS-----------AVHSQCVTGLVFSPHSVP---------FLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWS 308 (344)
T ss_dssp CCEEE-----------ECCSSCEEEEEECSSSSC---------CEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEEE-----------cCCCCCEEEEEEccCCCe---------EEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEe
Confidence 44443 579999999999999865 7999999999999997643 34444456789999999
Q ss_pred CCCCCeeEEccCCceEEEEeCC
Q 019258 322 PQNPSDVICSLEWESIAIVSRP 343 (343)
Q Consensus 322 ~~~~~~l~~~~~~~~i~~~~~~ 343 (343)
|++...|++++.|+.|.+|+-|
T Consensus 309 p~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 309 PLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp SSSTTEEEEEETTSCEEEEECC
T ss_pred CCCCeEEEEEcCCCeEEEEECC
Confidence 9654566788899999999753
No 2
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-40 Score=298.29 Aligned_cols=294 Identities=18% Similarity=0.163 Sum_probs=227.7
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCC-CCCceeeeeCCCCCC--CCCCccCCCCCCeeEEEccCCCeEEEEcCCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDA-DSPSLETHSISLPAS--LTPHSQWTPPTRISSLSTSHQSLVAASTLSG 92 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~-~~~~l~~w~~~~~~~--~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg 92 (343)
-|...|.+|+|+| ++++||+||.|... -..++++|+...... ..+....+|...|.+++|+.+..+++++.||
T Consensus 40 ~H~~~V~~v~fSp----DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg 115 (357)
T 4g56_B 40 CMEVQIGAVRYRR----DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSG 115 (357)
T ss_dssp CCCSEEEEEEECS----SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTS
T ss_pred cccCCEEEEEECC----CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCC
Confidence 3778899999999 99999999976420 012477888754322 2233445688899999999666788899999
Q ss_pred cEEEEEccCceeeeeec-cCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--
Q 019258 93 SLHVLSSAMQVLLSVDE-NSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-- 167 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~-~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-- 167 (343)
+|+|||+...+...... ....|.+.|++++|+ ++.|++++.||+|++||+++++ ....+..|.. .|.+++|++
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~-~~~~~~~h~~-~v~~v~~s~~~ 193 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA-VLKSYNAHSS-EVNCVAACPGK 193 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE-EEEEECCCSS-CEEEEEECTTC
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCCCC-CEEEEEEccCC
Confidence 99999998554433222 223689999999998 8899999999999999999984 6666666766 899999998
Q ss_pred CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeee
Q 019258 168 PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVL 247 (343)
Q Consensus 168 ~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~ 247 (343)
...+++++.|++|++||++. ++++..+.... +...+.+++|+|++..++++|+.|+.|++||+++++....
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~---~~~~~~~~~~~-----~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~- 264 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRK---PKPATRIDFCA-----SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQT- 264 (357)
T ss_dssp SSCEEEEETTSCEEECCTTS---SSCBCBCCCTT-----CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEE-
T ss_pred CceeeeeccCCceEEEECCC---Cceeeeeeecc-----ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEE-
Confidence 45799999999999999998 66555443221 1167999999999888899999999999999998654443
Q ss_pred ecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC-CcccccccccccceeeecCCCCC
Q 019258 248 SGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE-EPFELLAEPCAINSFDIDPQNPS 326 (343)
Q Consensus 248 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~-~~~~~~~~~~~i~s~~~~~~~~~ 326 (343)
+ ..|...|++|+|+|++.. +|++++.||+|++||... +....+.+..+|++++|+|.++.
T Consensus 265 ~----------~~~~~~v~~l~~sp~~~~---------~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 265 S----------AVHSQNITGLAYSYHSSP---------FLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHS 325 (357)
T ss_dssp E----------CCCSSCEEEEEECSSSSC---------CEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTT
T ss_pred E----------eccceeEEEEEEcCCCCC---------EEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCC
Confidence 3 568999999999999865 799999999999999753 34444555678999999986778
Q ss_pred eeEEccCCceEEEEeCC
Q 019258 327 DVICSLEWESIAIVSRP 343 (343)
Q Consensus 327 ~l~~~~~~~~i~~~~~~ 343 (343)
+|++++.|+.|++|+-|
T Consensus 326 ~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 326 KFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EEEEEETTSCEEEEECC
T ss_pred EEEEEcCCCeEEEEECC
Confidence 99999999999999853
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.7e-40 Score=290.49 Aligned_cols=285 Identities=14% Similarity=0.110 Sum_probs=230.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|.+.|.+|+|+|....++.+|+|||.|+. +++|++.............|...|.+++|+ +..++++++.|++|
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~-----v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDL-----VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSC-----EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCC-----EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 689999999999954456789999999975 679998543211112234688999999999 88899999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF 171 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 171 (343)
++||+...+.+.... .|...+.+++|+ ++.+++++.||.|++||+++++.... +..+.. .+.+++|+| +..|
T Consensus 105 ~lWd~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~-~~~~~~-~v~~~~~spdg~~l 179 (321)
T 3ow8_A 105 RLWDLENGKQIKSID---AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS-LDTRGK-FILSIAYSPDGKYL 179 (321)
T ss_dssp EEEETTTTEEEEEEE---CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEE-EECSSS-CEEEEEECTTSSEE
T ss_pred EEEECCCCCEEEEEe---CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEE-ecCCCc-eEEEEEECCCCCEE
Confidence 999998766554432 467788899998 88999999999999999998854444 444544 799999999 8899
Q ss_pred EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCC
Q 019258 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVG 251 (343)
Q Consensus 172 ~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~ 251 (343)
++++.|+.|++||++. ++.+..+..+. .+|.+++|+|++. ++++|+.||+|++||++...... .+
T Consensus 180 asg~~dg~i~iwd~~~---~~~~~~~~~h~-------~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~~~~~-~~--- 244 (321)
T 3ow8_A 180 ASGAIDGIINIFDIAT---GKLLHTLEGHA-------MPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAG-TL--- 244 (321)
T ss_dssp EEEETTSCEEEEETTT---TEEEEEECCCS-------SCCCEEEECTTSC-EEEEECTTSCEEEEETTTCCEEE-EE---
T ss_pred EEEcCCCeEEEEECCC---CcEEEEEcccC-------CceeEEEEcCCCC-EEEEEcCCCeEEEEECCCcceeE-EE---
Confidence 9999999999999988 77777777665 7899999999876 56899999999999998855443 33
Q ss_pred CCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccccccccccceeeecCCCCCeeE
Q 019258 252 TGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLAEPCAINSFDIDPQNPSDVI 329 (343)
Q Consensus 252 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~~~~l~ 329 (343)
.+|...|.+++|+|++. .|++++.||+|++|+.... ..++..+...|.+++++| ++..|+
T Consensus 245 -------~~h~~~v~~~~~sp~~~----------~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~ 306 (321)
T 3ow8_A 245 -------SGHASWVLNVAFCPDDT----------HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG-NGSKIV 306 (321)
T ss_dssp -------CCCSSCEEEEEECTTSS----------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred -------cCCCCceEEEEECCCCC----------EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECC-CCCEEE
Confidence 57999999999999987 7999999999999997533 334445567899999999 679999
Q ss_pred EccCCceEEEEeCC
Q 019258 330 CSLEWESIAIVSRP 343 (343)
Q Consensus 330 ~~~~~~~i~~~~~~ 343 (343)
++++|+.|++|+-|
T Consensus 307 s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 307 SVGDDQEIHIYDCP 320 (321)
T ss_dssp EEETTCCEEEEECC
T ss_pred EEeCCCeEEEEeCC
Confidence 99999999999876
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.3e-39 Score=293.28 Aligned_cols=279 Identities=14% Similarity=0.139 Sum_probs=232.1
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++.+|++|+.|+. |++|++...... .....|.+.|.+++|+ ++.+|++|+.||+|
T Consensus 106 gh~~~V~~~~~~p----~~~~l~s~s~Dg~-----i~vwd~~~~~~~--~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 106 GHRSPVTRVIFHP----VFSVMVSASEDAT-----IKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp CCSSCEEEEEECS----SSSEEEEEESSSC-----EEEEETTTCCCC--EEECCCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred ccCCcEEEEEEcC----CCCEEEEEeCCCe-----EEEEECCCCcEE--EEEeccCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 5788999999999 8899999999975 779999653222 2223588999999999 88899999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF 171 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 171 (343)
++||+...+.+.. ..+|...|.++.|+ ++.+++++.|++|++||++++. ....+..|.. .+.++.+++ +..+
T Consensus 175 ~iwd~~~~~~~~~---~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~h~~-~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 175 KLWDFQGFECIRT---MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE-WVRMVRPNQDGTLI 249 (410)
T ss_dssp CEEETTSSCEEEC---CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSS-CEEEEEECTTSSEE
T ss_pred EEEeCCCCceeEE---EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-EEEEEeCCCc-cEEEEEECCCCCEE
Confidence 9999986554433 34699999999998 8899999999999999999985 5555566665 799999999 8899
Q ss_pred EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCC-------------------CeEEEEEecCCc
Q 019258 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSR-------------------KHTCLAGGSSGT 232 (343)
Q Consensus 172 ~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~-------------------~~~~~sg~~dg~ 232 (343)
++++.|++|++||++. .+....+..|. ..|.+++|+|++ ..++++|+.||+
T Consensus 250 ~s~s~D~~v~vwd~~~---~~~~~~~~~h~-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 250 ASCSNDQTVRVWVVAT---KECKAELREHR-------HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp EEEETTSCEEEEETTT---CCEEEEECCCS-------SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred EEEcCCCeEEEEECCC---CceeeEecCCC-------ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 9999999999999988 67777777665 789999999963 236789999999
Q ss_pred EEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccccc
Q 019258 233 VFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLA 310 (343)
Q Consensus 233 v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~ 310 (343)
|++||++++.....+ .+|...|.+++|+|++. +|++++.||+|++|+.... ...+..
T Consensus 320 i~iwd~~~~~~~~~~-----------~~h~~~v~~v~~~~~g~----------~l~s~s~D~~i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 320 IKMWDVSTGMCLMTL-----------VGHDNWVRGVLFHSGGK----------FILSCADDKTLRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp EEEEETTTTEEEEEE-----------ECCSSCEEEEEECSSSS----------CEEEEETTTEEEEECCTTSCCCEEEEC
T ss_pred EEEEECCCCceEEEE-----------ECCCCcEEEEEEcCCCC----------EEEEEeCCCeEEEEECCCCceEEEEcC
Confidence 999999986544443 46899999999999987 7999999999999997532 334444
Q ss_pred cccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 311 EPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 311 ~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
+...|.+++++| ++.+|++|+.|+.|.+|+.
T Consensus 379 h~~~v~~l~~~~-~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 379 HEHFVTSLDFHK-TAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CSSCEEEEEECS-SSSCEEEEETTSEEEEEC-
T ss_pred CCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeC
Confidence 567899999999 5689999999999999973
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-38 Score=284.23 Aligned_cols=282 Identities=17% Similarity=0.157 Sum_probs=230.4
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++++|++|+.|+. +++|++...... .....|...|.+++|+ ++.+|++|+.|+.|
T Consensus 53 gH~~~v~~~~~s~----d~~~l~s~s~Dg~-----v~iWd~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 53 GHLAKIYAMHWGT----DSRLLLSASQDGK-----LIIWDSYTTNKV--HAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp CCSSCEEEEEECT----TSSEEEEEETTTE-----EEEEETTTCCEE--EEEECSSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred CCCCceEEEEECC----CCCEEEEEeCCCc-----EEEEECCCCCcc--eEeecCCccEEEEEECCCCCEEEEEeCCCeE
Confidence 5888999999999 8999999999975 779998543221 2223577889999999 88999999999999
Q ss_pred EEEEccCce-eeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE
Q 019258 95 HVLSSAMQV-LLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF 171 (343)
Q Consensus 95 ~v~~~~~~~-~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 171 (343)
++|++...+ .........+|.+.|.++.|. +..+++++.|++|++||++++. ....+..|.. .|.+++|+| +..+
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~-~v~~~~~~~~~~~l 199 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ-QTTTFTGHTG-DVMSLSLAPDTRLF 199 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTE-EEEEECCCSS-CEEEEEECTTSSEE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCc-EEEEEcCCCC-ceEEEEECCCCCEE
Confidence 999997432 122222334699999999998 7789999999999999999984 5566666766 799999999 8899
Q ss_pred EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCC
Q 019258 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVG 251 (343)
Q Consensus 172 ~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~ 251 (343)
++++.|++|++||++. +.++..+..|. ..|.+++|+|++. ++++|+.||+|++||++.......+.
T Consensus 200 ~sg~~d~~v~~wd~~~---~~~~~~~~~h~-------~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~--- 265 (340)
T 1got_B 200 VSGACDASAKLWDVRE---GMCRQTFTGHE-------SDINAICFFPNGN-AFATGSDDATCRLFDLRADQELMTYS--- 265 (340)
T ss_dssp EEEETTSCEEEEETTT---CSEEEEECCCS-------SCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEEC---
T ss_pred EEEeCCCcEEEEECCC---CeeEEEEcCCc-------CCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCcEEEEEc---
Confidence 9999999999999998 77777777665 7899999999875 56899999999999999865443332
Q ss_pred CCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccccccccccceeeecCCCCCeeE
Q 019258 252 TGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLAEPCAINSFDIDPQNPSDVI 329 (343)
Q Consensus 252 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~~~~l~ 329 (343)
+..+...|.+++|+|++. +|++++.||.|++|+.... ...+..+..+|.+++++| ++.+|+
T Consensus 266 ------~~~~~~~v~~~~~s~~g~----------~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~ 328 (340)
T 1got_B 266 ------HDNIICGITSVSFSKSGR----------LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD-DGMAVA 328 (340)
T ss_dssp ------CTTCCSCEEEEEECTTSS----------EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSCEE
T ss_pred ------cCCcccceEEEEECCCCC----------EEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcC-CCCEEE
Confidence 123456799999999987 7999999999999996432 234444567899999999 679999
Q ss_pred EccCCceEEEEe
Q 019258 330 CSLEWESIAIVS 341 (343)
Q Consensus 330 ~~~~~~~i~~~~ 341 (343)
+|+.|+.|++|+
T Consensus 329 s~s~D~~i~iWd 340 (340)
T 1got_B 329 TGSWDSFLKIWN 340 (340)
T ss_dssp EEETTSCEEEEC
T ss_pred EEcCCccEEecC
Confidence 999999999995
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.1e-38 Score=276.79 Aligned_cols=278 Identities=14% Similarity=0.154 Sum_probs=222.4
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|.+.|.+|+|+| ++++|++|+.|+. +++|++...... .....|...|.+++|+ ++++|++|+.|+.|
T Consensus 11 ~h~~~V~~~~fsp----~~~~l~s~~~dg~-----v~lWd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 11 NRSDRVKGIDFHP----TEPWVLTTLYSGR-----VELWNYETQVEV--RSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp EECSCEEEEEECS----SSSEEEEEETTSE-----EEEEETTTTEEE--EEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred CCCCceEEEEECC----CCCEEEEEcCCCc-----EEEEECCCCcee--EEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 5788999999999 8999999999975 779999653221 2223577899999999 88999999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--CCE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS--PTE 170 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~ 170 (343)
++|++...+.+.... .|.+.|.+++|+ +..+++++.||+|++||++++..+...+..|.. .|.+++|+| +..
T Consensus 80 ~vwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFE---AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPST 155 (304)
T ss_dssp EEEETTTCCEEEEEE---CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS-CEEEEEECTTCTTE
T ss_pred EEEECCCCcEEEEEe---CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC-cEEEEEECCCCCCE
Confidence 999998766554432 699999999999 889999999999999999887556677777776 899999998 578
Q ss_pred EEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCC-CeEEEEEecCCcEEEEEccCCceeeeeec
Q 019258 171 FVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSR-KHTCLAGGSSGTVFAWDLRWQQQSIVLSG 249 (343)
Q Consensus 171 l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~-~~~~~sg~~dg~v~iwd~~~~~~~~~~~~ 249 (343)
|++++.|++|++||++. ..+...+.... . ..+..++++|.. ..++++|+.||+|++||+++++....+
T Consensus 156 l~sgs~D~~v~iwd~~~---~~~~~~~~~~~--~----~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~-- 224 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQ---STPNFTLTTGQ--E----RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL-- 224 (304)
T ss_dssp EEEEETTSEEEEEETTC---SSCSEEEECCC--T----TCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEE--
T ss_pred EEEEeCCCeEEEEECCC---CCccceeccCC--c----CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceee--
Confidence 99999999999999988 55555554332 1 569999998742 346789999999999999986544443
Q ss_pred CCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-c-ccccccccccceeeecCCCCC-
Q 019258 250 VGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-P-FELLAEPCAINSFDIDPQNPS- 326 (343)
Q Consensus 250 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~-~~~~~~~~~i~s~~~~~~~~~- 326 (343)
.+|...|..++|+|+++ .|++++.||+|++|+.... . ..+......+.+++++|+++.
T Consensus 225 ---------~~h~~~v~~~~~~p~~~----------~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (304)
T 2ynn_A 225 ---------EGHMSNVSFAVFHPTLP----------IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (304)
T ss_dssp ---------ECCSSCEEEEEECSSSS----------EEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGG
T ss_pred ---------CCCCCCEEEEEECCCCC----------EEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCce
Confidence 57999999999999987 7999999999999997532 2 233333567899999985544
Q ss_pred eeEEccCCceEE
Q 019258 327 DVICSLEWESIA 338 (343)
Q Consensus 327 ~l~~~~~~~~i~ 338 (343)
++++|++++.+.
T Consensus 286 ~~asg~~~g~~~ 297 (304)
T 2ynn_A 286 YIASGFDNGFTV 297 (304)
T ss_dssp CEEEEETTEEEE
T ss_pred EEEEecCCceEE
Confidence 588888776443
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.6e-37 Score=277.56 Aligned_cols=282 Identities=16% Similarity=0.210 Sum_probs=226.3
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++++|+|||.|+. +++|+....... .....+...|.+++|+ ++..|++|+.|+.+
T Consensus 62 gH~~~V~~~~~s~----d~~~l~s~s~Dg~-----v~vWd~~~~~~~--~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 62 GHGNKVLCMDWCK----DKRRIVSSSQDGK-----VIVWDSFTTNKE--HAVTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp CCSSCEEEEEECT----TSSEEEEEETTSE-----EEEEETTTCCEE--EEEECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred CCCCeEEEEEECC----CCCEEEEEeCCCe-----EEEEECCCCCcc--eEEecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 5889999999999 8899999999975 779998543221 2223456789999999 88999999999999
Q ss_pred EEEEccCce--e-eeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--
Q 019258 95 HVLSSAMQV--L-LSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-- 167 (343)
Q Consensus 95 ~v~~~~~~~--~-~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-- 167 (343)
++|++.... . .........|.+.|.++.|+ +..+++++.|++|++||+++++ +...+..|.. .+.++++++
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~-~~~~~~~h~~-~v~~~~~~~~~ 208 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ-LLQSFHGHGA-DVLCLDLAPSE 208 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSS-CEEEEEECCCS
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEcCCCC-CeEEEEEEeCC
Confidence 999986221 0 01111123589999999998 7799999999999999999985 5556666665 799999987
Q ss_pred -CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeee
Q 019258 168 -PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246 (343)
Q Consensus 168 -~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~ 246 (343)
++.|++++.|++|++||++. ++++..+..|. ..|.+++|+|++. ++++|+.||+|++||++.......
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~---~~~~~~~~~h~-------~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRS---GQCVQAFETHE-------SDVNSVRYYPSGD-AFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTT---CCEEEEECCCS-------SCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCC---CcEEEEecCCC-------CCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEEE
Confidence 46899999999999999998 77777777665 7899999999875 578999999999999998544333
Q ss_pred eecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccccccccccceeeecCCC
Q 019258 247 LSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLAEPCAINSFDIDPQN 324 (343)
Q Consensus 247 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~ 324 (343)
+.. ..+...+.+++|+|++. .|++++.||+|++|+.... ...+..+..+|.+++++| +
T Consensus 278 ~~~---------~~~~~~~~~~~~s~~g~----------~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~sp-d 337 (354)
T 2pbi_B 278 YSK---------ESIIFGASSVDFSLSGR----------LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP-D 337 (354)
T ss_dssp ECC---------TTCCSCEEEEEECTTSS----------EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-T
T ss_pred EcC---------CCcccceeEEEEeCCCC----------EEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECC-C
Confidence 321 23445789999999987 7999999999999997432 334445567899999999 6
Q ss_pred CCeeEEccCCceEEEEe
Q 019258 325 PSDVICSLEWESIAIVS 341 (343)
Q Consensus 325 ~~~l~~~~~~~~i~~~~ 341 (343)
|.+|++|+.|+.|++|+
T Consensus 338 g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 338 GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSCEEEEETTSEEEEEC
T ss_pred CCEEEEEcCCCCEEecC
Confidence 79999999999999995
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=273.59 Aligned_cols=295 Identities=12% Similarity=0.139 Sum_probs=222.2
Q ss_pred Cccc-ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC-CCCccCCCCCCeeEEEcc-CCCeEEEEcCCC
Q 019258 16 PQSK-YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL-TPHSQWTPPTRISSLSTS-HQSLVAASTLSG 92 (343)
Q Consensus 16 ~~~~-~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~-~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg 92 (343)
.|.. .|..++|+| ++++||+|+.|+. |++|++...... .......|.+.|.+++|+ ++.+|++|+.|+
T Consensus 13 ~h~~~~v~~l~~sp----~g~~las~~~D~~-----i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 13 AHPDSRCWFLAWNP----AGTLLASCGGDRR-----IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CSTTSCEEEEEECT----TSSCEEEEETTSC-----EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCCcEEEEEECC----CCCEEEEEcCCCe-----EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 3666 899999999 8999999999975 779998553211 111224688999999999 889999999999
Q ss_pred cEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCc--eEEEEEcCCCccceEEEEeCC-
Q 019258 93 SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGG--EFKRVYDGNGLVGFNCVKWAS- 167 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~--~~~~~~~~~~~~~v~~~~~~~- 167 (343)
.+++|++....... .....+|.++|.+++|+ ++.|++++.|++|++||++++. .....+..|.. .|.+++|+|
T Consensus 84 ~v~iw~~~~~~~~~-~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~p~ 161 (345)
T 3fm0_A 84 TTCIWKKNQDDFEC-VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ-DVKHVVWHPS 161 (345)
T ss_dssp CEEEEEECCC-EEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS-CEEEEEECSS
T ss_pred cEEEEEccCCCeEE-EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC-CeEEEEECCC
Confidence 99999987443211 22224699999999998 8899999999999999998753 23445556665 799999999
Q ss_pred CCEEEEEeCCCcEEEEEccccCCCC--CeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceee
Q 019258 168 PTEFVTGGFGYGLQWWDLRRAGSGG--PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSI 245 (343)
Q Consensus 168 ~~~l~t~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~ 245 (343)
+..|++++.|++|++||++. .. +...+.+|. ..|.+++|+|++. +|++|+.||+|++||.+.+....
T Consensus 162 ~~~l~s~s~d~~i~~w~~~~---~~~~~~~~~~~h~-------~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~ 230 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREEE---DDWVCCATLEGHE-------STVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQ 230 (345)
T ss_dssp SSCEEEEETTSCEEEEEEET---TEEEEEEEECCCS-------SCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTT
T ss_pred CCEEEEEeCCCcEEEEEecC---CCEEEEEEecCCC-------CceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCc
Confidence 88999999999999999987 43 234455554 7899999999986 56899999999999975432211
Q ss_pred eeecCCCC-----cccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc------ccc-----c
Q 019258 246 VLSGVGTG-----EAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP------FEL-----L 309 (343)
Q Consensus 246 ~~~~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~------~~~-----~ 309 (343)
........ .......|...|++++|+|++. .|++++.|+.|++|+..... ..+ .
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~----------~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 300 (345)
T 3fm0_A 231 GVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG----------ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQ 300 (345)
T ss_dssp CCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC----------CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETT
T ss_pred cceeeccCCccceeEEecCCCCCcEEEEEEecCCC----------EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecc
Confidence 10000000 0000124888999999999987 79999999999999864221 111 1
Q ss_pred ccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 310 AEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 310 ~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.+...|++++|+|+.+..|++|++|+.|++|+.
T Consensus 301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEE
T ss_pred cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEe
Confidence 234689999999965468999999999999974
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=275.21 Aligned_cols=245 Identities=14% Similarity=0.079 Sum_probs=196.1
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCC--CccCCCCCCeeEEEcc-CCCeEEEEcCCCc
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTP--HSQWTPPTRISSLSTS-HQSLVAASTLSGS 93 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~--~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~ 93 (343)
+...|.+++|+| + +.|++|+.|+. |++|++........ .....|.+.|++++|+ ++.+|++|+.||+
T Consensus 81 ~~~~v~~~~~s~----d-~~l~~~s~dg~-----v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~ 150 (344)
T 4gqb_B 81 TEAGVADLTWVG----E-RGILVASDSGA-----VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDIC 150 (344)
T ss_dssp ESSCEEEEEEET----T-TEEEEEETTSE-----EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cCCCEEEEEEeC----C-CeEEEEECCCE-----EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence 345699999999 4 46889999975 77999965432211 2234789999999999 8899999999999
Q ss_pred EEEEEccCceeeeeeccCCccccCeEEEEec--C-CEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--C
Q 019258 94 LHVLSSAMQVLLSVDENSGFHVGPISGVDLT--G-SECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS--P 168 (343)
Q Consensus 94 v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~-~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~--~ 168 (343)
|++||+.+.+.+... .+|.+.|+++.|+ + ..|++++.|++|++||+++++....+........+.+++|+| .
T Consensus 151 i~iwd~~~~~~~~~~---~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 227 (344)
T 4gqb_B 151 IKVWDLAQQVVLSSY---RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQS 227 (344)
T ss_dssp EEEEETTTTEEEEEE---CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCT
T ss_pred EEEEECCCCcEEEEE---cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCC
Confidence 999999876655444 3699999999998 3 578999999999999999885444433222333689999998 5
Q ss_pred CEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeee
Q 019258 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248 (343)
Q Consensus 169 ~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~ 248 (343)
..+++|+.|++|++||++. ++++..+.+|. ..|++++|+|++..+|++|+.||+|++||++.++. .. .
T Consensus 228 ~~l~sg~~dg~v~~wd~~~---~~~~~~~~~h~-------~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-~~-~ 295 (344)
T 4gqb_B 228 EVFVFGDENGTVSLVDTKS---TSCVLSSAVHS-------QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-FR-S 295 (344)
T ss_dssp TEEEEEETTSEEEEEESCC-----CCEEEECCS-------SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-EE-E
T ss_pred cceEEeccCCcEEEEECCC---CcEEEEEcCCC-------CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-EE-E
Confidence 6788999999999999999 78888888776 78999999999877889999999999999987542 22 2
Q ss_pred cCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc
Q 019258 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP 305 (343)
Q Consensus 249 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~ 305 (343)
.+|.+.|++|+|+|++.. .|++||.||+|++|+...+.
T Consensus 296 ----------~~H~~~V~~v~~sp~~~~---------llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 296 ----------QAHRDFVRDATWSPLNHS---------LLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ----------CCCSSCEEEEEECSSSTT---------EEEEEETTSCEEEEECCC--
T ss_pred ----------cCCCCCEEEEEEeCCCCe---------EEEEEcCCCeEEEEECCCCC
Confidence 579999999999999885 67799999999999986543
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=269.70 Aligned_cols=284 Identities=15% Similarity=0.150 Sum_probs=211.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc--CC-CCCCeeEEEcc-CCCeEEEEcCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ--WT-PPTRISSLSTS-HQSLVAASTLS 91 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~--~~-~~~~v~~v~~~-~~~~l~~~s~d 91 (343)
.|...|.+++|+| + +|++|+.|+. +++|++..... .+... .. |.+.|.+++|+ ++.+|++++.|
T Consensus 12 ~h~~~v~~~~~s~----~--~las~~~D~~-----i~lw~~~~~~~-~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 12 LYKEKIWSFDFSQ----G--ILATGSTDRK-----IKLVSVKYDDF-TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CCSSCEEEEEEET----T--EEEEEESSSC-----EEEEECSSSCC-EEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred cCCCceeeeccCC----C--EEEEEcCCCE-----EEEEEecCCCe-EEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 5888999999999 4 8999999975 77999964321 12222 23 88999999999 88999999999
Q ss_pred CcEEEEEccCce----eeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCC-c--eEEEEEcCCCccceEE
Q 019258 92 GSLHVLSSAMQV----LLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGG-G--EFKRVYDGNGLVGFNC 162 (343)
Q Consensus 92 g~v~v~~~~~~~----~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~-~--~~~~~~~~~~~~~v~~ 162 (343)
++|++|++.... .........+|.+.|.+++|+ +++|++++.|++|++||++.. . .+...+..|.. .|.+
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~-~v~~ 158 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ-DVKH 158 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS-CEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC-ceEE
Confidence 999999985211 112222234699999999998 889999999999999999532 1 34555666665 8999
Q ss_pred EEeCC-CCEEEEEeCCCcEEEEEccccCCC--CCeeEEecccCCCCCcccCeEEEEEcCCC-CeEEEEEecCCcEEEEEc
Q 019258 163 VKWAS-PTEFVTGGFGYGLQWWDLRRAGSG--GPVLQFKGNFGSQGKASGMIHSVDIHPSR-KHTCLAGGSSGTVFAWDL 238 (343)
Q Consensus 163 ~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~v~~~p~~-~~~~~sg~~dg~v~iwd~ 238 (343)
++|+| +..|++++.|++|++||.+. + +++..+.+|. +.|.+++|+|++ ...+++|+.|++|++||+
T Consensus 159 v~~~p~~~~l~s~s~D~~i~iW~~~~---~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 159 VIWHPSEALLASSSYDDTVRIWKDYD---DDWECVAVLNGHE-------GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEET---TEEEEEEEECCCS-------SCEEEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCC---CCeeEEEEccCCC-------CcEEEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence 99999 88999999999999999976 3 4555666665 789999999984 246789999999999999
Q ss_pred cCCc-------eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc----cc
Q 019258 239 RWQQ-------QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP----FE 307 (343)
Q Consensus 239 ~~~~-------~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~----~~ 307 (343)
+... .....+ ...|...|++++|+++ . .|++++.||+|++|+..... ..
T Consensus 229 ~~~~~~~~~~~~~~~~~---------~~~h~~~v~~v~~s~~-~----------~l~s~~~dg~v~iw~~~~~~~~~~~~ 288 (330)
T 2hes_X 229 MGDDEDDQQEWVCEAIL---------PDVHKRQVYNVAWGFN-G----------LIASVGADGVLAVYEEVDGEWKVFAK 288 (330)
T ss_dssp EEECTTSCEEEEEEEEC---------CSCCSSCEEEEEECTT-S----------CEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred cCCCccccceeEEeeec---------ccccccceEEEEEcCC-C----------EEEEEeCCCEEEEEEcCCCceEEEec
Confidence 7532 111122 0248899999999954 3 69999999999999975431 11
Q ss_pred c-ccccc-ccceeeecCC-CCCeeEEccCCceEEEEeC
Q 019258 308 L-LAEPC-AINSFDIDPQ-NPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 308 ~-~~~~~-~i~s~~~~~~-~~~~l~~~~~~~~i~~~~~ 342 (343)
. ..+.. .|++++++|. ++.+|++|++|+.|++|+-
T Consensus 289 ~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 289 RALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp ESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred cccccccceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence 1 12233 7999999984 4689999999999999974
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.8e-37 Score=279.94 Aligned_cols=288 Identities=17% Similarity=0.178 Sum_probs=225.4
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++++|+|||.|+. |++|++...... .....|...|.+++|+ ++.+|++|+.|+.+
T Consensus 64 gH~~~V~~~~~sp----~~~~l~s~s~D~~-----v~iWd~~~~~~~--~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 64 GHSGKVYSLDWTP----EKNWIVSASQDGR-----LIVWNALTSQKT--HAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp CCSSCEEEEEECT----TSSCEEEEETTSE-----EEEEETTTTEEE--EEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred ccccEEEEEEEcC----CCCEEEEEeCCCe-----EEEEECCCCccc--eEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 5888999999999 8899999999975 779998543221 2233577889999999 88999999999999
Q ss_pred EEEEccCce----eeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEE-----cCCCccceEE
Q 019258 95 HVLSSAMQV----LLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVY-----DGNGLVGFNC 162 (343)
Q Consensus 95 ~v~~~~~~~----~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~-----~~~~~~~v~~ 162 (343)
++|++.... .........+|.+.|.++.|. +..+++++.|++|++||+.++. ....+ ..|.. .+.+
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~~~~~~h~~-~v~~ 210 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ-RISIFGSEFPSGHTA-DVLS 210 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC-EEEEECCCSSSSCCS-CEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc-EEEEeecccCCCCcc-CeEE
Confidence 999986321 122223345799999999987 4579999999999999999985 44443 33444 7999
Q ss_pred EEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccC
Q 019258 163 VKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240 (343)
Q Consensus 163 ~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~ 240 (343)
++|++ .+.|++|+.|++|++||++. ...++..+.+|. +.|.+++|+|++. .|++|+.||+|++||+++
T Consensus 211 ~~~~~~~~~~l~sgs~D~~v~~wd~~~--~~~~~~~~~~h~-------~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 211 LSINSLNANMFISGSCDTTVRLWDLRI--TSRAVRTYHGHE-------GDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp EEECSSSCCEEEEEETTSCEEEEETTT--TCCCCEEECCCS-------SCCCEEEECTTSS-EEEEECSSSCEEEEETTT
T ss_pred EEeecCCCCEEEEEECCCeEEEEECCC--CCcceEEECCcC-------CCeEEEEEecCCC-eEEEEcCCCeEEEEECCC
Confidence 99987 67899999999999999986 356677777766 7899999999976 568999999999999998
Q ss_pred CceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc--ccc----cccccc
Q 019258 241 QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP--FEL----LAEPCA 314 (343)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~--~~~----~~~~~~ 314 (343)
+.....+.... . ....+...|.+++|+|++. +|++++.||.|++|+..... ..+ ..+...
T Consensus 281 ~~~~~~~~~~~-~---~~~~~~~~v~~~~~s~~g~----------~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 281 GHQLQVYNREP-D---RNDNELPIVTSVAFSISGR----------LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGR 346 (380)
T ss_dssp TEEEEEECCCC-S---SSCCSSCSCSEEEECSSSS----------EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCC
T ss_pred CcEEEEecccc-c---ccccccCceEEEEECCCCC----------EEEEEECCCCEEEEECCCCceEEEEecccCCCCCc
Confidence 65544332110 0 0012334589999999988 79999999999999974322 222 223578
Q ss_pred cceeeecCCCCCeeEEccCCceEEEEe
Q 019258 315 INSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 315 i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
|++++++| +|.+|++|+.|+.|++|+
T Consensus 347 v~~l~~s~-dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 347 ISCLGLSS-DGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp CCEEEECS-SSSEEEEECTTSCEEEEE
T ss_pred eEEEEECC-CCCEEEEeeCCCCEEEEe
Confidence 99999999 679999999999999997
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-36 Score=266.90 Aligned_cols=277 Identities=13% Similarity=0.134 Sum_probs=218.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCC--CCCC-ccCCCCCCeeEEEcc-CCCeEEEEcCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPAS--LTPH-SQWTPPTRISSLSTS-HQSLVAASTLS 91 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~--~~~~-~~~~~~~~v~~v~~~-~~~~l~~~s~d 91 (343)
.|...|.+++|+| ..+++|+|||.|+. +++|++..... ..++ ....|...|.+++|+ ++.+|++++.|
T Consensus 15 gH~~~V~~l~~~~---~~~~~l~s~s~D~~-----v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 15 GHNGWVTSLATSA---GQPNLLLSASRDKT-----LISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp CCSSCEEEEEECS---SCTTEEEEEETTSE-----EEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccceEEEEEccC---CCccEEEEecCCcc-----EEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 5889999999999 45689999999975 77999853221 1112 234688999999999 88999999999
Q ss_pred CcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-C
Q 019258 92 GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-P 168 (343)
Q Consensus 92 g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 168 (343)
++|++||+...+.+... .+|...|.+++|+ +..+++++.|++|++||++.. ....+..|.. .+.++++.| .
T Consensus 87 ~~v~~wd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~~-~v~~~~~~~~~ 160 (319)
T 3frx_A 87 KTLRLWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--CLATLLGHND-WVSQVRVVPNE 160 (319)
T ss_dssp SEEEEEETTTTEEEEEE---ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--EEEEECCCSS-CEEEEEECCC-
T ss_pred CEEEEEECCCCCeeEEE---ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eEEEEeccCC-cEEEEEEccCC
Confidence 99999999876655433 2699999999998 889999999999999999765 3444455655 799999988 2
Q ss_pred ------CEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCc
Q 019258 169 ------TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ 242 (343)
Q Consensus 169 ------~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~ 242 (343)
..+++++.|+.|++||++. .+....+.+|. ..|.+++|+|++. ++++|+.||+|++||++..+
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~---~~~~~~~~~h~-------~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQ---FQIEADFIGHN-------SNINTLTASPDGT-LIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTT---TEEEEEECCCC-------SCEEEEEECTTSS-EEEEEETTCEEEEEETTTTE
T ss_pred CCCCCccEEEEEeCCCEEEEEECCc---chhheeecCCC-------CcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 2799999999999999988 66666676665 7899999999986 56899999999999999865
Q ss_pred eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc--cccc--------ccc
Q 019258 243 QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP--FELL--------AEP 312 (343)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~--~~~~--------~~~ 312 (343)
....+. +...|.+++|+|++. .+++++ ++.+++|+..... ..+. ...
T Consensus 230 ~~~~~~------------~~~~v~~~~~sp~~~----------~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 286 (319)
T 3frx_A 230 AMYTLS------------AQDEVFSLAFSPNRY----------WLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAE 286 (319)
T ss_dssp EEEEEE------------CCSCEEEEEECSSSS----------EEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGC
T ss_pred EEEEec------------CCCcEEEEEEcCCCC----------EEEEEc-CCCcEEEEeCcCeeeeccCccccccccCcC
Confidence 544443 356899999999876 555555 5568888754321 1111 113
Q ss_pred cccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 313 CAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 313 ~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
..+.+++|+| +|++|++|+.|+.|++|+
T Consensus 287 ~~v~~~~~sp-dg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 287 PHAVSLAWSA-DGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp CCEEEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred cceeEEEECC-CCCEEEEeecCceEEEEE
Confidence 4688999999 679999999999999997
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.2e-35 Score=261.95 Aligned_cols=281 Identities=13% Similarity=0.136 Sum_probs=215.3
Q ss_pred CcccceeeEEecCCC--CCCCCeEEEEeecCCCCCCceeeeeCCCCCCC----CCC-ccCCCCCCeeEEEcc-CCCeEEE
Q 019258 16 PQSKYIDAVRWLPPL--SPLSKLAVLAIYDTDADSPSLETHSISLPASL----TPH-SQWTPPTRISSLSTS-HQSLVAA 87 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~--~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~----~~~-~~~~~~~~v~~v~~~-~~~~l~~ 87 (343)
.|.+.|.+|+|.+.. .+++++|+||+.|+. +++|++...... .+. ....|...|.+++|+ ++.+|++
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~-----v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKT-----VMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSC-----EEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCE-----EEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 588999999994321 147899999999975 779999543211 112 234688999999999 8889999
Q ss_pred EcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEc--CCCccceEEE
Q 019258 88 STLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYD--GNGLVGFNCV 163 (343)
Q Consensus 88 ~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~--~~~~~~v~~~ 163 (343)
++.|++|++||+...+.+... .+|.+.|.+++|+ +..+++++.|++|++||+... ....... .|.. .+.++
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~---~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~-~v~~~ 168 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRF---VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSD-WVSCV 168 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEE---ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSS-CEEEE
T ss_pred EcCCCcEEEEECCCCcEEEEE---cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCc-eeeee
Confidence 999999999999866554433 2699999999998 889999999999999999854 2322221 3443 79999
Q ss_pred EeCC-C----------CEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCc
Q 019258 164 KWAS-P----------TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT 232 (343)
Q Consensus 164 ~~~~-~----------~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~ 232 (343)
+|+| . ..+++++.|+.|++||.+ ......+..|. ..|.+++|+|++. +|++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~h~-------~~v~~~~~s~~g~-~l~sgs~dg~ 236 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN----FQIRYTFKAHE-------SNVNHLSISPNGK-YIATGGKDKK 236 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT----TEEEEEEECCS-------SCEEEEEECTTSS-EEEEEETTCE
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEcCC----CceeEEEcCcc-------ccceEEEECCCCC-EEEEEcCCCe
Confidence 9998 3 689999999999999943 35555666665 7899999999986 5689999999
Q ss_pred EEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-c---cc
Q 019258 233 VFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-F---EL 308 (343)
Q Consensus 233 v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~---~~ 308 (343)
|++||++....+.... .+...|.+++|+|++. +++++.|+.|++|+..... . .+
T Consensus 237 v~iwd~~~~~~~~~~~-----------~~~~~v~~v~~sp~~~-----------~la~~~d~~v~iw~~~~~~~~~~~~~ 294 (343)
T 2xzm_R 237 LLIWDILNLTYPQREF-----------DAGSTINQIAFNPKLQ-----------WVAVGTDQGVKIFNLMTQSKAPVCTI 294 (343)
T ss_dssp EEEEESSCCSSCSEEE-----------ECSSCEEEEEECSSSC-----------EEEEEESSCEEEEESSSCCSCSEEEC
T ss_pred EEEEECCCCcccceee-----------cCCCcEEEEEECCCCC-----------EEEEECCCCEEEEEeCCCCCCceEEe
Confidence 9999996544443333 1445799999999865 4567789999999864321 1 11
Q ss_pred c-----------ccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 309 L-----------AEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 309 ~-----------~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
. .+...|++++|+| +|++|++|++|+.|++|+
T Consensus 295 ~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 295 EAEPITKAEGQKGKNPQCTSLAWNA-LGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp CCCSGGGBTTBCCSCCCEEEEEECS-SSCCEEEEETTSEEEEEE
T ss_pred ecCcchhhhhhcCCCCceEEEEECC-CCCeEEEecCCceEEEEE
Confidence 1 1235689999999 679999999999999996
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.7e-35 Score=264.41 Aligned_cols=297 Identities=13% Similarity=0.074 Sum_probs=215.5
Q ss_pred CCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCc----------------cCCCCCCeeEEE
Q 019258 15 FPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHS----------------QWTPPTRISSLS 78 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~----------------~~~~~~~v~~v~ 78 (343)
+.|...|.+++|+| ++++|++|+ |+ .+++|++........+. ...+...|.+++
T Consensus 61 ~~h~~~V~~v~fsp----dg~~la~g~-~~-----~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 130 (393)
T 1erj_A 61 LDHTSVVCCVKFSN----DGEYLATGC-NK-----TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVC 130 (393)
T ss_dssp EECSSCCCEEEECT----TSSEEEEEC-BS-----CEEEEETTTCCEEEEECC-----------------CCCCBEEEEE
T ss_pred cCCCCEEEEEEECC----CCCEEEEEc-CC-----cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEE
Confidence 45888999999999 899999987 43 36799985432110000 001223499999
Q ss_pred cc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCC
Q 019258 79 TS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGN 155 (343)
Q Consensus 79 ~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~ 155 (343)
|+ ++.+|++|+.||.|++||+...+.+... .+|...|.+++|+ +..+++++.|++|++||+++++ ....+..+
T Consensus 131 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~-~~~~~~~~ 206 (393)
T 1erj_A 131 FSPDGKFLATGAEDRLIRIWDIENRKIVMIL---QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ-CSLTLSIE 206 (393)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-EEEEEECS
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcEEEEE---ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe-eEEEEEcC
Confidence 99 8899999999999999999866554433 3699999999998 8899999999999999999985 44444444
Q ss_pred CccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcE
Q 019258 156 GLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTV 233 (343)
Q Consensus 156 ~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v 233 (343)
. .+.+++|+| +..+++++.|+.|++||++. +..+..+.........|...|.+++|+|++. ++++|+.||+|
T Consensus 207 ~--~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~---~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v 280 (393)
T 1erj_A 207 D--GVTTVAVSPGDGKYIAAGSLDRAVRVWDSET---GFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSV 280 (393)
T ss_dssp S--CEEEEEECSTTCCEEEEEETTSCEEEEETTT---CCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEE
T ss_pred C--CcEEEEEECCCCCEEEEEcCCCcEEEEECCC---CcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEE
Confidence 3 599999998 67899999999999999988 6665555221100011227899999999986 46899999999
Q ss_pred EEEEccCCceeeeeecCC-CCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccccc
Q 019258 234 FAWDLRWQQQSIVLSGVG-TGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLA 310 (343)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~ 310 (343)
++||++............ ........+|...|.+++|+|++. +|++++.||.|++|+.... ...+..
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~----------~l~sgs~D~~v~iwd~~~~~~~~~l~~ 350 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE----------YILSGSKDRGVLFWDKKSGNPLLMLQG 350 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECGGGC----------EEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC----------EEEEEeCCCeEEEEECCCCeEEEEECC
Confidence 999998643211100000 000001156889999999999987 7999999999999997533 233334
Q ss_pred cccccceeeecCC-----CCCeeEEccCCceEEEEe
Q 019258 311 EPCAINSFDIDPQ-----NPSDVICSLEWESIAIVS 341 (343)
Q Consensus 311 ~~~~i~s~~~~~~-----~~~~l~~~~~~~~i~~~~ 341 (343)
+...|.++++++. ++.+|++|+.|+.|++|+
T Consensus 351 h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 351 HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 5678999998762 457899999999999997
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.2e-34 Score=253.51 Aligned_cols=280 Identities=14% Similarity=0.089 Sum_probs=220.4
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++++|++|+.|+. +++|++...... .....|...|.+++|+ ++++|++++.||.|
T Consensus 21 gh~~~v~~~~~s~----~~~~l~s~~~dg~-----i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 21 GHTKAVSSVKFSP----NGEWLASSSADKL-----IKIWGAYDGKFE--KTISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp CCSSCEEEEEECT----TSSEEEEEETTSC-----EEEEETTTCCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ccCCcEEEEEECC----CCCEEEEeeCCCe-----EEEEeCCCcccc--hhhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 5889999999999 8899999999975 779998543221 2234688899999999 88999999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF 171 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 171 (343)
++|++...+.+... ..|...|.++.|+ ++.+++++.||+|++||+++++ ....+..|.. .+.+++|++ +..+
T Consensus 90 ~vwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~-~v~~~~~~~~~~~l 164 (312)
T 4ery_A 90 KIWDVSSGKCLKTL---KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSD-PVSAVHFNRDGSLI 164 (312)
T ss_dssp EEEETTTCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-EEEEECCCSS-CEEEEEECTTSSEE
T ss_pred EEEECCCCcEEEEE---cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-EEEEecCCCC-cEEEEEEcCCCCEE
Confidence 99999866554433 2588999999998 8899999999999999999885 4555555655 799999999 8899
Q ss_pred EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCC
Q 019258 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVG 251 (343)
Q Consensus 172 ~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~ 251 (343)
++++.|+.|++||++. ++.+..+..... .++.+++|+|++.. +++++.||.|++||+++.+....+.
T Consensus 165 ~~~~~d~~i~~wd~~~---~~~~~~~~~~~~------~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~--- 231 (312)
T 4ery_A 165 VSSSYDGLCRIWDTAS---GQCLKTLIDDDN------PPVSFVKFSPNGKY-ILAATLDNTLKLWDYSKGKCLKTYT--- 231 (312)
T ss_dssp EEEETTSCEEEEETTT---CCEEEEECCSSC------CCEEEEEECTTSSE-EEEEETTTEEEEEETTTTEEEEEEC---
T ss_pred EEEeCCCcEEEEECCC---CceeeEEeccCC------CceEEEEECCCCCE-EEEEcCCCeEEEEECCCCcEEEEEE---
Confidence 9999999999999988 666666543321 67999999999864 5789999999999999865444332
Q ss_pred CCcccccCCccccE--EEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccccccccccceeeecCCCCCe
Q 019258 252 TGEAVTHSLSESEV--WEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLAEPCAINSFDIDPQNPSD 327 (343)
Q Consensus 252 ~~~~~~~~~h~~~v--~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~~~~ 327 (343)
.|...+ ....+++.+.. ++++++.||.|++|+.... ...+..+...|.+++++| ++..
T Consensus 232 --------~~~~~~~~~~~~~~~~~~~---------~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~ 293 (312)
T 4ery_A 232 --------GHKNEKYCIFANFSVTGGK---------WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP-TENI 293 (312)
T ss_dssp --------SSCCSSSCCCEEEECSSSC---------EEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECS-SSSE
T ss_pred --------ecCCceEEEEEEEEeCCCc---------EEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecC-cCCc
Confidence 344332 23345544444 7999999999999997533 233444567899999999 5688
Q ss_pred eEEcc--CCceEEEEeC
Q 019258 328 VICSL--EWESIAIVSR 342 (343)
Q Consensus 328 l~~~~--~~~~i~~~~~ 342 (343)
+++++ .|+.|.+|+.
T Consensus 294 l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 294 IASAALENDKTIKLWKS 310 (312)
T ss_dssp EEEEECTTTCCEEEEEC
T ss_pred eEEEEccCCccEEEecC
Confidence 88775 6899999974
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.6e-34 Score=254.28 Aligned_cols=279 Identities=14% Similarity=0.223 Sum_probs=219.9
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC--CCC-ccCCCCCCeeEEEcc-CCCeEEEEcCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL--TPH-SQWTPPTRISSLSTS-HQSLVAASTLS 91 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~--~~~-~~~~~~~~v~~v~~~-~~~~l~~~s~d 91 (343)
.|...|++|+|+| ..+++|+|||.|+. |++|++...... .+. ....|...|.+++|+ ++.+|++++.|
T Consensus 36 GH~~~V~~v~~sp---~~~~~l~S~s~D~~-----i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 36 GHNGWVTQIATTP---QFPDMILSASRDKT-----IIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp CCSSCEEEEEECT---TCTTEEEEEETTSC-----EEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CccCCEEEEEEeC---CCCCEEEEEcCCCe-----EEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 5889999999999 34689999999975 779999653321 122 224578999999999 88999999999
Q ss_pred CcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--
Q 019258 92 GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-- 167 (343)
Q Consensus 92 g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-- 167 (343)
|.|++|+........... .+...+..+.+. +..+++++.|+.+++||+............+.. .+.+++|.+
T Consensus 108 ~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~ 183 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFV---GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE-WVSCVRFSPNS 183 (340)
T ss_dssp SEEEEEETTTTEEEEEEE---CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSS-CEEEEEECSCS
T ss_pred ccceEEeecccceeeeec---CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccC-cccceEEccCC
Confidence 999999998554443332 355677777777 889999999999999999876444444444544 799999987
Q ss_pred -CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeee
Q 019258 168 -PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246 (343)
Q Consensus 168 -~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~ 246 (343)
...+++++.|+.|++||++. .+.+..+..+. ++|.+++|+|++. ++++|+.||.|++||+++......
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~---~~~~~~~~~h~-------~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLAN---CKLKTNHIGHT-------GYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTT---TEEEEEECCCS-------SCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEEEEE
T ss_pred CCcEEEEEcCCCEEEEEECCC---CceeeEecCCC-------CcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCceeee
Confidence 45788999999999999988 67777777665 7899999999876 568999999999999998655444
Q ss_pred eecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc--ccc---------ccccccc
Q 019258 247 LSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP--FEL---------LAEPCAI 315 (343)
Q Consensus 247 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~--~~~---------~~~~~~i 315 (343)
+. +...|..+.|+|++ .+++++.|+.|++|+..... .++ ..+...|
T Consensus 253 ~~------------~~~~v~~~~~~~~~-----------~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (340)
T 4aow_A 253 LD------------GGDIINALCFSPNR-----------YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309 (340)
T ss_dssp EE------------CSSCEEEEEECSSS-----------SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCE
T ss_pred ec------------CCceEEeeecCCCC-----------ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCE
Confidence 33 45789999999875 57888999999999975322 111 1234679
Q ss_pred ceeeecCCCCCeeEEccCCceEEEEe
Q 019258 316 NSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 316 ~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
++++++| ++++|++|++|+.|++|+
T Consensus 310 ~~l~~s~-dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 310 TSLAWSA-DGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEE
T ss_pred EEEEECC-CCCEEEEEeCCCEEEEEe
Confidence 9999999 679999999999999997
No 17
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.5e-34 Score=252.97 Aligned_cols=283 Identities=17% Similarity=0.187 Sum_probs=227.9
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc---CCCCCCeeEEEcc-CCCeEE
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ---WTPPTRISSLSTS-HQSLVA 86 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~---~~~~~~v~~v~~~-~~~~l~ 86 (343)
.+....|...|.+++|+| +++++++++ |+. +++|++........+.. ..|...|.+++|+ ++++|+
T Consensus 44 ~~~~~~h~~~v~~~~~~~----~~~~l~~~~-dg~-----i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 113 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISN----PTRHVYTGG-KGC-----VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLI 113 (337)
T ss_dssp EEEEECCSSCCCEEEECS----SSSEEEEEC-BSE-----EEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEE
T ss_pred cceeccCCCceEEEEEec----CCcEEEEcC-CCe-----EEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEE
Confidence 345567899999999999 889999998 754 77999965443333322 2688899999999 888999
Q ss_pred EEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEE
Q 019258 87 ASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVK 164 (343)
Q Consensus 87 ~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~ 164 (343)
+++.||.|++|++...+...... ...|...|.++.|+ ++.+++++.||.|++||+++++ ....+..|.. .+.+++
T Consensus 114 ~~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~-~~~~~~~~~~-~i~~~~ 190 (337)
T 1gxr_A 114 VGGEASTLSIWDLAAPTPRIKAE-LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTD-GASCID 190 (337)
T ss_dssp EEESSSEEEEEECCCC--EEEEE-EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSS-CEEEEE
T ss_pred EEcCCCcEEEEECCCCCcceeee-cccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc-eeeeeecccC-ceEEEE
Confidence 99999999999998554222222 22588899999998 7899999999999999999984 5555565655 799999
Q ss_pred eCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCce
Q 019258 165 WAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ 243 (343)
Q Consensus 165 ~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~ 243 (343)
|+| +..+++++.|+.|++||++. ++.+..+. +. ..+.+++|+|++. ++++++.||.|++||++..+.
T Consensus 191 ~~~~~~~l~~~~~dg~i~~~d~~~---~~~~~~~~-~~-------~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 191 ISNDGTKLWTGGLDNTVRSWDLRE---GRQLQQHD-FT-------SQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT---TEEEEEEE-CS-------SCEEEEEECTTSS-EEEEEETTSCEEEEETTSSCE
T ss_pred ECCCCCEEEEEecCCcEEEEECCC---CceEeeec-CC-------CceEEEEECCCCC-EEEEEcCCCcEEEEECCCCCe
Confidence 999 88999999999999999988 56555554 22 6799999999986 567899999999999987543
Q ss_pred eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-ccccccccccceeeecC
Q 019258 244 SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLAEPCAINSFDIDP 322 (343)
Q Consensus 244 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~~~~~i~s~~~~~ 322 (343)
.. . ..|...|.+++|+|++. +|++++.||.|++|+..... .....+..++.++.++|
T Consensus 259 -~~-~----------~~~~~~v~~~~~~~~~~----------~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~ 316 (337)
T 1gxr_A 259 -YQ-L----------HLHESCVLSLKFAYCGK----------WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV 316 (337)
T ss_dssp -EE-E----------CCCSSCEEEEEECTTSS----------EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECT
T ss_pred -EE-E----------cCCccceeEEEECCCCC----------EEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECC
Confidence 22 2 46889999999999987 79999999999999976433 33334467899999999
Q ss_pred CCCCeeEEccCCceEEEEe
Q 019258 323 QNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 323 ~~~~~l~~~~~~~~i~~~~ 341 (343)
++++|++++.++.|++|+
T Consensus 317 -~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 317 -DDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp -TSCEEEEEETTSCEEEEE
T ss_pred -CCCEEEEecCCCeEEEEE
Confidence 569999999999999997
No 18
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=270.69 Aligned_cols=297 Identities=14% Similarity=0.169 Sum_probs=229.0
Q ss_pred cccCCcccceeeEEecCCCCCCCC-eEEEE----------eecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc
Q 019258 12 VHRFPQSKYIDAVRWLPPLSPLSK-LAVLA----------IYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS 80 (343)
Q Consensus 12 ~~~~~~~~~i~~v~w~p~~~~~~~-~l~t~----------s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~ 80 (343)
+.++.+..+|.+++|+| +++ +|++| +.|+. |++|++.......++..+.|...|.+++|+
T Consensus 6 ~~~l~~~~~v~~~~~sp----~g~~~l~~g~~~g~~~~~~~~d~~-----v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s 76 (416)
T 2pm9_A 6 MVKLAEFSRTATFAWSH----DKIPLLVSGTVSGTVDANFSTDSS-----LELWSLLAADSEKPIASLQVDSKFNDLDWS 76 (416)
T ss_dssp ----CEEEESCBCCBCS----SSSCEEEEBCBSSCCCSSCCCCCC-----CEEEESSSGGGCSCSCCCCCSSCEEEEEEC
T ss_pred hhhHhhhhhcceEeeCC----CCCCEEEEEecCcccccccCCCCe-----EEEEEccCCCCCcEEEEEecCCceEEEEEC
Confidence 44555667899999999 654 99999 55543 779999664433456667899999999999
Q ss_pred -CCCeEEEEcCCCcEEEEEccCce-eeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCc------eEE
Q 019258 81 -HQSLVAASTLSGSLHVLSSAMQV-LLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGG------EFK 149 (343)
Q Consensus 81 -~~~~l~~~s~dg~v~v~~~~~~~-~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~------~~~ 149 (343)
++.+|++++.||.|++|++.... ..........|.+.|+++.|+ +..+++++.||.|++||+.++. ...
T Consensus 77 ~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 156 (416)
T 2pm9_A 77 HNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPL 156 (416)
T ss_dssp SSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCB
T ss_pred CCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccc
Confidence 88899999999999999998511 111122234699999999998 6789999999999999998764 222
Q ss_pred EE--EcCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEE
Q 019258 150 RV--YDGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCL 225 (343)
Q Consensus 150 ~~--~~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~ 225 (343)
.. ...|.. .+.+++|+| ...+++++.|+.|++||++. ++++..+..+.... .+...+.+++|+|++..+++
T Consensus 157 ~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~---~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 157 TPGQSMSSVD-EVISLAWNQSLAHVFASAGSSNFASIWDLKA---KKEVIHLSYTSPNS-GIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp CCCCSCCSSC-CCCEEEECSSCTTEEEEESSSSCEEEEETTT---TEEEEEECCCCCSS-CCCCCEEEEEECSSCTTEEE
T ss_pred ccccccCCCC-CeeEEEeCCCCCcEEEEEcCCCCEEEEECCC---CCcceEEecccccc-ccCCceEEEEECCCCCCEEE
Confidence 21 223444 799999999 47899999999999999988 66666666542110 01277999999999877889
Q ss_pred EEecCC---cEEEEEccCCceeeeeecCCCCcccccC-CccccEEEEEEee-cCCCCcCCCCCccceEEEecCCeEEEEe
Q 019258 226 AGGSSG---TVFAWDLRWQQQSIVLSGVGTGEAVTHS-LSESEVWEVQYDC-HTKSSNISSSRVLPAMFCSEDGILAVVE 300 (343)
Q Consensus 226 sg~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p-~~~~~~~~~~~~~~l~s~s~dg~i~~~~ 300 (343)
+++.|+ .|++||++....+.... . .|...|.+++|+| ++. +|++++.||.|++|+
T Consensus 232 ~~~~d~~~~~i~~~d~~~~~~~~~~~----------~~~~~~~v~~~~~s~~~~~----------~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNANTPLQTL----------NQGHQKGILSLDWCHQDEH----------LLLSSGRDNTVLLWN 291 (416)
T ss_dssp EEECCSSSCCCCEEETTSTTSCSBCC----------CSCCSSCEEEEEECSSCSS----------CEEEEESSSEEEEEC
T ss_pred EEECCCCCceEEEEeCCCCCCCcEEe----------ecCccCceeEEEeCCCCCC----------eEEEEeCCCCEEEee
Confidence 999999 99999999865555555 5 7899999999999 554 899999999999999
Q ss_pred cCCC--cccccccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 301 QGEE--PFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 301 ~~~~--~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.... ...+..+..+|.+++++|+.+.+|++++.++.|++|+-
T Consensus 292 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 292 PESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp SSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred CCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 7533 23333446789999999954489999999999999974
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.6e-34 Score=252.51 Aligned_cols=239 Identities=15% Similarity=0.166 Sum_probs=198.3
Q ss_pred CCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCC
Q 019258 69 TPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGG 145 (343)
Q Consensus 69 ~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~ 145 (343)
.|.+.|.+++|+ ++.+|++++.||.|++||+.....+.... .|..+|.++.|+ ++.+++++.|++|++||+.++
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ---VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE---CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee---ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 578899999999 88999999999999999998665554332 588899999998 899999999999999999998
Q ss_pred ceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCe-eEEecccCCCCCcccCeEEEEEcCCCCeE
Q 019258 146 GEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPV-LQFKGNFGSQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~v~~~p~~~~~ 223 (343)
+ ....+..|.. .|.+++|+| +..+++++.|++|++||++. +..+ ..+.+|. ..|.+++|+|.+..+
T Consensus 88 ~-~~~~~~~h~~-~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~---~~~~~~~~~~h~-------~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 88 E-KVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWEN---NWALEQTFEGHE-------HFVMCVAFNPKDPST 155 (304)
T ss_dssp C-EEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEEGGG---TTEEEEEECCCC-------SCEEEEEECTTCTTE
T ss_pred c-EEEEEeCCCC-cEEEEEEcCCCCEEEEECCCCeEEEEECCC---CcchhhhhcccC-------CcEEEEEECCCCCCE
Confidence 5 4555566665 799999999 88999999999999999988 4333 4455554 789999999976667
Q ss_pred EEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecC-CCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 224 CLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHT-KSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 224 ~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
+++|+.||+|++||++.......+. ..|...+..+.|+|.. .. +|++++.||+|++|+..
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~---------~l~s~s~D~~i~iWd~~ 216 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLT----------TGQERGVNYVDYYPLPDKP---------YMITASDDLTIKIWDYQ 216 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEE----------CCCTTCEEEEEECCSTTCC---------EEEEEETTSEEEEEETT
T ss_pred EEEEeCCCeEEEEECCCCCccceec----------cCCcCcEEEEEEEEcCCCC---------EEEEEcCCCeEEEEeCC
Confidence 8999999999999998866555554 5577889999998742 22 79999999999999975
Q ss_pred CC--cccccccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 303 EE--PFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 303 ~~--~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.. ...+..+...|.++.++| ++.+|++|+.|+.|++|+-
T Consensus 217 ~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 217 TKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp TTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEET
T ss_pred CCccceeeCCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEEC
Confidence 43 234444567899999999 5689999999999999974
No 20
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4e-34 Score=257.11 Aligned_cols=287 Identities=8% Similarity=0.006 Sum_probs=222.1
Q ss_pred cccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc-CCCCCCeeEEEcc-CCCeEEEEc
Q 019258 12 VHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ-WTPPTRISSLSTS-HQSLVAAST 89 (343)
Q Consensus 12 ~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~-~~~~~~v~~v~~~-~~~~l~~~s 89 (343)
++.+ |...|.+++|+| ++++|++|+.|+. |++|++.... .++... ..|.+.|.+++|+ ++++|++++
T Consensus 3 ~~~~-~~~~i~~~~~s~----~~~~l~~~~~d~~-----v~i~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 71 (372)
T 1k8k_C 3 YHSF-LVEPISCHAWNK----DRTQIAICPNNHE-----VHIYEKSGNK-WVQVHELKEHNGQVTGVDWAPDSNRIVTCG 71 (372)
T ss_dssp EEES-CSSCCCEEEECT----TSSEEEEECSSSE-----EEEEEEETTE-EEEEEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred eecc-cCCCeEEEEECC----CCCEEEEEeCCCE-----EEEEeCCCCc-EEeeeeecCCCCcccEEEEeCCCCEEEEEc
Confidence 4444 778999999999 8999999998864 7799995532 112223 3688999999999 889999999
Q ss_pred CCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCce---EEEEEcCCCccceEEEE
Q 019258 90 LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGE---FKRVYDGNGLVGFNCVK 164 (343)
Q Consensus 90 ~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~---~~~~~~~~~~~~v~~~~ 164 (343)
.||.|++|++...+....... ..|...|.++.|+ ++.+++++.||.|++||++.+.. .......|.. .+.+++
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~-~i~~~~ 149 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVI-LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS-TVLSLD 149 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEEC-CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS-CEEEEE
T ss_pred CCCeEEEEECCCCeeeeeEEe-ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC-CeeEEE
Confidence 999999999986553333322 3588899999998 88999999999999999987642 2333344444 899999
Q ss_pred eCC-CCEEEEEeCCCcEEEEEcccc---------------CCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe
Q 019258 165 WAS-PTEFVTGGFGYGLQWWDLRRA---------------GSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228 (343)
Q Consensus 165 ~~~-~~~l~t~~~d~~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~ 228 (343)
|+| +..+++++.|+.|++||++.. ..++++..+..+. ..+.+++|+|++. ++++++
T Consensus 150 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~-~l~~~~ 221 (372)
T 1k8k_C 150 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC-------GWVHGVCFSANGS-RVAWVS 221 (372)
T ss_dssp ECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS-------SCEEEEEECSSSS-EEEEEE
T ss_pred EcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC-------CeEEEEEECCCCC-EEEEEe
Confidence 999 889999999999999997520 0134444555443 7899999999876 568899
Q ss_pred cCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC--Cc-
Q 019258 229 SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE--EP- 305 (343)
Q Consensus 229 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~--~~- 305 (343)
.||.|++||+++.+....+ ..|...|.+++|+|++. .++++ .||.|++|+... ..
T Consensus 222 ~d~~i~i~d~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~----------~l~~~-~d~~i~i~~~~~~~~~~ 279 (372)
T 1k8k_C 222 HDSTVCLADADKKMAVATL-----------ASETLPLLAVTFITESS----------LVAAG-HDCFPVLFTYDSAAGKL 279 (372)
T ss_dssp TTTEEEEEEGGGTTEEEEE-----------ECSSCCEEEEEEEETTE----------EEEEE-TTSSCEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCceeEEE-----------ccCCCCeEEEEEecCCC----------EEEEE-eCCeEEEEEccCcCceE
Confidence 9999999999986544443 45788999999999876 45555 999999998755 21
Q ss_pred ---------------------------------------cccc-ccccccceeeecCCCC---CeeEEccCCceEEEEe
Q 019258 306 ---------------------------------------FELL-AEPCAINSFDIDPQNP---SDVICSLEWESIAIVS 341 (343)
Q Consensus 306 ---------------------------------------~~~~-~~~~~i~s~~~~~~~~---~~l~~~~~~~~i~~~~ 341 (343)
..+. .+..+|+++++++.+| .+|++|++|+.|++|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 280 SFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp EECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred EEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 1222 3457899999886577 8999999999999997
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.5e-34 Score=249.61 Aligned_cols=251 Identities=13% Similarity=0.205 Sum_probs=193.9
Q ss_pred CCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc---CCCeEEEEcCC
Q 019258 15 FPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS---HQSLVAASTLS 91 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~---~~~~l~~~s~d 91 (343)
..|...|.+++|+| ++++|+||+.|+. +++|++.............|.+.|.+++|+ ++.+|++++.|
T Consensus 6 ~~h~~~V~~~~~s~----~g~~las~s~D~~-----v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D 76 (297)
T 2pm7_B 6 NAHNEMIHDAVMDY----YGKRMATCSSDKT-----IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 76 (297)
T ss_dssp CSCSSCEEEEEECT----TSSEEEEEETTSC-----EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cCCcCceEEEEECC----CCCEEEEEeCCCE-----EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC
Confidence 36888999999999 8999999999975 779999643211222334689999999997 27899999999
Q ss_pred CcEEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCceE-EEEEcCCCccceEEEEeC
Q 019258 92 GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGEF-KRVYDGNGLVGFNCVKWA 166 (343)
Q Consensus 92 g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~-~~~~~~~~~~~v~~~~~~ 166 (343)
|+|++|++...+...... ...|...|.+++|+ +..+++++.|++|++||++++... ...+..|.. .|.+++|+
T Consensus 77 ~~v~iWd~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~-~v~~~~~~ 154 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAV-HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWA 154 (297)
T ss_dssp TEEEEEEBSSSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS-CEEEEEEC
T ss_pred CEEEEEEcCCCceEEEEE-eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC-ccceEeec
Confidence 999999998543111111 23588999999997 578999999999999999875211 234455655 79999999
Q ss_pred CC--------------CEEEEEeCCCcEEEEEccccCCCC----CeeEEecccCCCCCcccCeEEEEEcCCC--CeEEEE
Q 019258 167 SP--------------TEFVTGGFGYGLQWWDLRRAGSGG----PVLQFKGNFGSQGKASGMIHSVDIHPSR--KHTCLA 226 (343)
Q Consensus 167 ~~--------------~~l~t~~~d~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~v~~~p~~--~~~~~s 226 (343)
|. ..|++++.|++|++||++. +. ....+.+|. .+|.+++|+|++ ..++++
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~---~~~~~~~~~~l~~H~-------~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS---DAQTYVLESTLEGHS-------DWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEET---TTTEEEEEEEECCCS-------SCEEEEEECCCCSSSEEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC---CCceEEEEEEecCCC-------CceEEEEECCCCCCceEEEE
Confidence 83 5899999999999999987 44 233455554 789999999986 467899
Q ss_pred EecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 227 GGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 227 g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
|+.||+|++||++....+...... ....|...|++++|+|++. .|++++.||+|++|+..
T Consensus 225 ~s~D~~v~iWd~~~~~~~~~~~~~------~~~~~~~~v~~~~~s~~g~----------~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 225 VSQDRTCIIWTQDNEQGPWKKTLL------KEEKFPDVLWRASWSLSGN----------VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EETTSCEEEEEESSTTSCCEEEES------SSSCCSSCEEEEEECSSSC----------CEEEEETTSCEEEEEEC
T ss_pred EECCCcEEEEEeCCCCCccceeee------ecccCCCcEEEEEECCCCC----------EEEEEcCCCcEEEEEEC
Confidence 999999999999874322111100 0135788999999999988 79999999999999875
No 22
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-35 Score=265.92 Aligned_cols=291 Identities=13% Similarity=0.116 Sum_probs=225.8
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCC-C-CCCccCCCCCCeeEEEcc-C-CCeEE
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPAS-L-TPHSQWTPPTRISSLSTS-H-QSLVA 86 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~-~-~~~~~~~~~~~v~~v~~~-~-~~~l~ 86 (343)
.+..+.|...|.+++|+| ++.+|++|+.|+. +++|++..... . .......|.+.|.+++|+ + +.+|+
T Consensus 60 ~~~~~~~~~~v~~~~~s~----~~~~l~~~~~dg~-----v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 130 (416)
T 2pm9_A 60 PIASLQVDSKFNDLDWSH----NNKIIAGALDNGS-----LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLA 130 (416)
T ss_dssp CSCCCCCSSCEEEEEECS----SSSCEEEEESSSC-----EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEE
T ss_pred EEEEEecCCceEEEEECC----CCCeEEEEccCCe-----EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEE
Confidence 344566888999999999 8899999999865 77999965211 1 223334688999999999 5 78999
Q ss_pred EEcCCCcEEEEEccCce------eeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEEcCCC-
Q 019258 87 ASTLSGSLHVLSSAMQV------LLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNG- 156 (343)
Q Consensus 87 ~~s~dg~v~v~~~~~~~------~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~- 156 (343)
+++.||.|++|++...+ ..........|...|.++.|+ +..+++++.||.|++||+++++ ....+..+.
T Consensus 131 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~ 209 (416)
T 2pm9_A 131 SGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK-EVIHLSYTSP 209 (416)
T ss_dssp EECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE-EEEEECCCCC
T ss_pred EEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC-cceEEecccc
Confidence 99999999999998554 222222234688999999998 4689999999999999999985 444444442
Q ss_pred ----ccceEEEEeCC-C-CEEEEEeCCC---cEEEEEccccCCCCCeeEEe-cccCCCCCcccCeEEEEEcCCCCeEEEE
Q 019258 157 ----LVGFNCVKWAS-P-TEFVTGGFGY---GLQWWDLRRAGSGGPVLQFK-GNFGSQGKASGMIHSVDIHPSRKHTCLA 226 (343)
Q Consensus 157 ----~~~v~~~~~~~-~-~~l~t~~~d~---~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~v~~~p~~~~~~~s 226 (343)
...+.+++|+| + ..+++++.|+ .|++||++. ...++..+. .+. ..|.+++|+|.+..++++
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~--~~~~~~~~~~~~~-------~~v~~~~~s~~~~~~l~s 280 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN--ANTPLQTLNQGHQ-------KGILSLDWCHQDEHLLLS 280 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS--TTSCSBCCCSCCS-------SCEEEEEECSSCSSCEEE
T ss_pred ccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC--CCCCcEEeecCcc-------CceeEEEeCCCCCCeEEE
Confidence 23799999999 3 5899999998 999999998 234555555 454 789999999943456789
Q ss_pred EecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc
Q 019258 227 GGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF 306 (343)
Q Consensus 227 g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~ 306 (343)
|+.||.|++||+++.+.... . ..|...|.+++|+|+++. .+++++.||.|++|+......
T Consensus 281 ~~~dg~v~~wd~~~~~~~~~-~----------~~~~~~v~~~~~s~~~~~---------~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 281 SGRDNTVLLWNPESAEQLSQ-F----------PARGNWCFKTKFAPEAPD---------LFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EESSSEEEEECSSSCCEEEE-E----------ECSSSCCCCEEECTTCTT---------EEEECCSSSEEEEEESCCCCC
T ss_pred EeCCCCEEEeeCCCCcccee-e----------cCCCCceEEEEECCCCCC---------EEEEEecCCcEEEEEccCCCC
Confidence 99999999999998654433 3 468899999999999855 899999999999999653221
Q ss_pred cccc-------------------------------------cccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 307 ELLA-------------------------------------EPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 307 ~~~~-------------------------------------~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
.... ...++.+++|+| +|++|++|++++.|++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 341 TLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAF-GGKLVQITPDGKGVSITN 411 (416)
T ss_dssp SSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEET-TTEEECBCTTSSCBCCBC
T ss_pred CcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEee-CCeEEEEeCCCCeEEEEE
Confidence 1100 134678999999 679999999999999986
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-34 Score=260.27 Aligned_cols=244 Identities=14% Similarity=0.059 Sum_probs=190.8
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC--CCCccCCCCCCeeEEEcc-CCCeEEEEcCCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL--TPHSQWTPPTRISSLSTS-HQSLVAASTLSG 92 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~--~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg 92 (343)
.|...|.+++|+| ++. +++++.|+. |++|++...... .......|.+.|++++|+ ++.+|++++.||
T Consensus 92 ~~~~~V~~~~~s~----d~~-~l~~s~dg~-----v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg 161 (357)
T 4g56_B 92 QTEAGVTDVAWVS----EKG-ILVASDSGA-----VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF 161 (357)
T ss_dssp ECSSCEEEEEEET----TTE-EEEEETTSC-----EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCCCEEEEEEcC----CCC-EEEEECCCE-----EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 4667899999999 554 567777864 779999653322 123345788999999999 889999999999
Q ss_pred cEEEEEccCceeeeeeccCCccccCeEEEEec--C-CEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--
Q 019258 93 SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--G-SECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-- 167 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~-~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-- 167 (343)
.|++||+...+.+... ..|...|++++|+ + ..+++++.||+|++||+++++.............+.+++|+|
T Consensus 162 ~v~iwd~~~~~~~~~~---~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~ 238 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSY---NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEK 238 (357)
T ss_dssp CEEEEETTTTEEEEEE---CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTS
T ss_pred eEEEEECCCCcEEEEE---cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcc
Confidence 9999999876655443 3699999999998 3 578999999999999998875333332222233699999998
Q ss_pred CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeee
Q 019258 168 PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVL 247 (343)
Q Consensus 168 ~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~ 247 (343)
...|++++.|+.|++||++. ++++..+..+. ..|++++|+|++..+|++|+.||+|++||+++++. ...
T Consensus 239 ~~~la~g~~d~~i~~wd~~~---~~~~~~~~~~~-------~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~-~~~ 307 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKN---PDSAQTSAVHS-------QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV-FRD 307 (357)
T ss_dssp TTEEEEEESSSCEEEEESSC---GGGCEEECCCS-------SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE-EEE
T ss_pred cceEEEeecccceeEEECCC---CcEeEEEeccc-------eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE-eEE
Confidence 56788999999999999998 77777787665 78999999999877889999999999999987543 332
Q ss_pred ecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 248 SGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 248 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
.+|.+.|++|+|+|.+.. .|++||.||+|++|+...
T Consensus 308 -----------~~H~~~V~~vafsP~d~~---------~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 308 -----------LSHRDFVTGVAWSPLDHS---------KFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp -----------CCCSSCEEEEEECSSSTT---------EEEEEETTSCEEEEECC-
T ss_pred -----------CCCCCCEEEEEEeCCCCC---------EEEEEcCCCeEEEEECCC
Confidence 359999999999995454 899999999999999753
No 24
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.3e-34 Score=263.55 Aligned_cols=300 Identities=13% Similarity=0.109 Sum_probs=207.9
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc--CCCeEEEEcCCCc
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS--HQSLVAASTLSGS 93 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~--~~~~l~~~s~dg~ 93 (343)
+|...|++|+|+| .++.+||+|+.|+. |++|++........+....|.+.|++|+|+ ++.+|++++.||+
T Consensus 117 ~~~~~V~~l~~~P---~~~~~lasGs~dg~-----i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 117 PFDRRATSLAWHP---THPSTVAVGSKGGD-----IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp ECSSCEEEEEECS---SCTTCEEEEETTSC-----EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred CCCCCEEEEEEeC---CCCCEEEEEeCCCE-----EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 4677899999999 46789999999976 779999654433334456799999999998 6789999999999
Q ss_pred EEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--CC
Q 019258 94 LHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS--PT 169 (343)
Q Consensus 94 v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~ 169 (343)
|++||+..... ........+...+.+++|+ +..+++|+.||.|++||++.. .+ ..+..|.. .|.+++|+| ..
T Consensus 189 v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~-~~~~~h~~-~v~~v~~~p~~~~ 264 (435)
T 4e54_B 189 TRLQDFKGNIL-RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-EL-WNLRMHKK-KVTHVALNPCCDW 264 (435)
T ss_dssp EEEEETTSCEE-EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BC-CCSBCCSS-CEEEEEECTTCSS
T ss_pred EEEeeccCCce-eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-ee-EEEecccc-eEEeeeecCCCce
Confidence 99999975432 2222222345567888888 889999999999999999764 23 33455655 799999999 45
Q ss_pred EEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeec
Q 019258 170 EFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSG 249 (343)
Q Consensus 170 ~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~ 249 (343)
.+++++.|+.|++||++. .+....+....++. .+|++++|+|++. .|++|+.||.|++||+++...+..+..
T Consensus 265 ~~~s~s~d~~v~iwd~~~---~~~~~~~~~~~~h~----~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 265 FLATASVDQTVKIWDLRQ---VRGKASFLYSLPHR----HPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp EEEEEETTSBCCEEETTT---CCSSSCCSBCCBCS----SCEEECCBCTTSS-EEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred EEEEecCcceeeEEeccc---ccccceEEEeeecc----ccccceeECCCCC-eeEEEcCCCEEEEEECCCCccceEEec
Confidence 788999999999999988 44333332221112 7899999999986 467999999999999998776665542
Q ss_pred CCCCcccccCCccccEEEEEEeecCCCC--cCCCCCccceEEEecCCeEEEEecCCCc--cccc-cccccccee-eecCC
Q 019258 250 VGTGEAVTHSLSESEVWEVQYDCHTKSS--NISSSRVLPAMFCSEDGILAVVEQGEEP--FELL-AEPCAINSF-DIDPQ 323 (343)
Q Consensus 250 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~--~~~~~~~~~l~s~s~dg~i~~~~~~~~~--~~~~-~~~~~i~s~-~~~~~ 323 (343)
.... ......+....|+|.+... +...+....++++..++.|++|+..... ..+. .+...|.++ +|+|
T Consensus 337 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fsp- 410 (435)
T 4e54_B 337 HPHR-----HFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNP- 410 (435)
T ss_dssp CCCC-----CCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECT-
T ss_pred cccc-----ccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECC-
Confidence 1100 0011123344566554420 0000000023333355679999875432 2333 234678887 6898
Q ss_pred CCCeeEEccCCceEEEEeC
Q 019258 324 NPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 324 ~~~~l~~~~~~~~i~~~~~ 342 (343)
+|.+|++|+ ++.|++|+.
T Consensus 411 dg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 411 MGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp TSSCEEEEC-SSEEEECCC
T ss_pred CCCEEEEEc-CCcEEEEEC
Confidence 678888886 668999974
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.5e-33 Score=269.30 Aligned_cols=291 Identities=13% Similarity=0.117 Sum_probs=222.6
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCC-----CccCCCCCCeeEEEcc-CCCeEEEEc
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTP-----HSQWTPPTRISSLSTS-HQSLVAAST 89 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~-----~~~~~~~~~v~~v~~~-~~~~l~~~s 89 (343)
.|...|.+++|+| ++++|++|+.|+. +++|++........ +....|.+.|.+++|+ ++.+|++++
T Consensus 188 ~H~~~V~~v~fsp----dg~~las~s~D~~-----i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 188 EHTKFVHSVRYNP----DGSLFASTGGDGT-----IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp CCSSCEEEEEECT----TSSEEEEEETTSC-----EEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred cccCceEEEEECC----CCCEEEEEECCCc-----EEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence 4778999999999 8999999999975 77999854322111 1123689999999999 889999999
Q ss_pred CCCcEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-C
Q 019258 90 LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-P 168 (343)
Q Consensus 90 ~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 168 (343)
.|++|++||+...+.+........+...+..+.|.+..+++++.|+.+++||...+. +...+.+|.. .|.+++|+| +
T Consensus 259 ~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~-~~~~~~gh~~-~v~~l~~spdg 336 (611)
T 1nr0_A 259 ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGS-IDQVRYGHNK-AITALSSSADG 336 (611)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTE-EEEEECCCSS-CEEEEEECTTS
T ss_pred CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCC-cceEEcCCCC-CEEEEEEeCCC
Confidence 999999999986665544433334556677888889999999999999999998874 5666667766 899999999 8
Q ss_pred CEEEEEeCCCcEEEEEccccCCCCCeeEE-eccc-----------------------------C----------------
Q 019258 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQF-KGNF-----------------------------G---------------- 202 (343)
Q Consensus 169 ~~l~t~~~d~~i~iwd~~~~~~~~~~~~~-~~~~-----------------------------~---------------- 202 (343)
..|++++.|++|++||++. +.....+ ..|. .
T Consensus 337 ~~l~s~s~D~~v~~Wd~~~---~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~ 413 (611)
T 1nr0_A 337 KTLFSADAEGHINSWDIST---GISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQ 413 (611)
T ss_dssp SEEEEEETTSCEEEEETTT---CCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSC
T ss_pred CEEEEEeCCCcEEEEECCC---CceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCC
Confidence 8999999999999999876 2211110 0000 0
Q ss_pred -------CCC----------------------CcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCC
Q 019258 203 -------SQG----------------------KASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTG 253 (343)
Q Consensus 203 -------~~~----------------------~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~ 253 (343)
..+ .+...+.+++|+|+++ ++++|+.||+|++||++.........
T Consensus 414 ~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~-~lasgs~D~~v~lwd~~~~~~~~~~~----- 487 (611)
T 1nr0_A 414 PLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ-FVAVGGQDSKVHVYKLSGASVSEVKT----- 487 (611)
T ss_dssp EEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEEEETTEEEEEEE-----
T ss_pred CcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC-EEEEeCCCCeEEEEEccCCceeeeec-----
Confidence 000 0113478999999986 56899999999999997643221111
Q ss_pred cccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC--Cccc--ccc-cccccceeeecCCCCCee
Q 019258 254 EAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE--EPFE--LLA-EPCAINSFDIDPQNPSDV 328 (343)
Q Consensus 254 ~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~--~~~~--~~~-~~~~i~s~~~~~~~~~~l 328 (343)
..|...|.+|+|+|++. +|++++.|++|++|+... +... +.. +...|++++|+| +|++|
T Consensus 488 -----~~h~~~v~~v~fspdg~----------~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fsp-dg~~l 551 (611)
T 1nr0_A 488 -----IVHPAEITSVAFSNNGA----------FLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP-DNVRL 551 (611)
T ss_dssp -----EECSSCEEEEEECTTSS----------EEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECT-TSSEE
T ss_pred -----cCCCCceEEEEECCCCC----------EEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECC-CCCEE
Confidence 35889999999999988 799999999999999753 2211 223 457899999999 67999
Q ss_pred EEccCCceEEEEeC
Q 019258 329 ICSLEWESIAIVSR 342 (343)
Q Consensus 329 ~~~~~~~~i~~~~~ 342 (343)
++|+.|+.|++|+-
T Consensus 552 asgs~D~~v~lW~~ 565 (611)
T 1nr0_A 552 ATGSLDNSVIVWNM 565 (611)
T ss_dssp EEEETTSCEEEEET
T ss_pred EEEECCCcEEEEEC
Confidence 99999999999973
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.7e-33 Score=272.85 Aligned_cols=279 Identities=14% Similarity=0.217 Sum_probs=219.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC--CC-CccCCCCCCeeEEEcc-CCCeEEEEcCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL--TP-HSQWTPPTRISSLSTS-HQSLVAASTLS 91 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~--~~-~~~~~~~~~v~~v~~~-~~~~l~~~s~d 91 (343)
.|.+.|.+|+|+| .++++|+|||.|+. |++|++...... .+ .....|...|.+++|+ ++.+|++|+.|
T Consensus 380 ~H~~~V~~v~~~~---~~~~~l~s~s~D~~-----i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 380 AHTDMVTAIATPI---DNADIIVSASRDKS-----IILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp CCSSCEEEEECCT---TCCSEEEEEETTSE-----EEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cCCceeEEEEecC---CCCCEEEEEeCCCc-----EEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 5889999999999 45689999999975 779999653221 11 2234688999999999 88999999999
Q ss_pred CcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEc---CCCccceEEEEeC
Q 019258 92 GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYD---GNGLVGFNCVKWA 166 (343)
Q Consensus 92 g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~---~~~~~~v~~~~~~ 166 (343)
|.|+|||+......... ..|.+.|.+++|+ +..+++++.|++|++||+.... ...... .|.. .|.+++|+
T Consensus 452 g~v~vwd~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~~~h~~-~v~~~~~~ 526 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRF---VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC-KYTISEGGEGHRD-WVSCVRFS 526 (694)
T ss_dssp SEEEEEETTTTEEEEEE---ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSSTTSCSS-CEEEEEEC
T ss_pred CcEEEEECCCCcceeEE---eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc-ceeeccCCCCCCC-cEEEEEEe
Confidence 99999999866544333 2699999999998 8899999999999999987652 333322 3443 79999999
Q ss_pred C-C--CEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCce
Q 019258 167 S-P--TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ 243 (343)
Q Consensus 167 ~-~--~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~ 243 (343)
| . ..+++++.|++|++||++. .+....+.+|. +.|.+++|+|++. ++++|+.||+|++||++++..
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~~---~~~~~~~~~h~-------~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLSN---CKLRSTLAGHT-------GYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTT---CCEEEEECCCS-------SCEEEEEECTTSS-EEEEEETTSBCEEEETTTTEE
T ss_pred CCCCcceEEEEeCCCeEEEEECCC---CcEEEEEcCCC-------CCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCce
Confidence 8 3 5799999999999999988 67676777665 7899999999976 568999999999999998654
Q ss_pred eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc--ccccc----------
Q 019258 244 SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF--ELLAE---------- 311 (343)
Q Consensus 244 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~--~~~~~---------- 311 (343)
...+. +...|.+++|+|++. +++++.|+.|++|+...... .+..+
T Consensus 596 ~~~~~------------~~~~v~~~~~sp~~~-----------~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 652 (694)
T 3dm0_A 596 LYSLE------------ANSVIHALCFSPNRY-----------WLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADN 652 (694)
T ss_dssp EECCB------------CSSCEEEEEECSSSS-----------EEEEEETTEEEEEETTTTEEEEEECCCCC--------
T ss_pred EEEec------------CCCcEEEEEEcCCCc-----------EEEEEcCCCEEEEECCCCCChhhhccccccccccccc
Confidence 43322 456799999999864 45666678899999754321 11100
Q ss_pred ---------ccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 312 ---------PCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 312 ---------~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
...+.+++|+| +|.+|++|+.|+.|++|+-
T Consensus 653 ~~~~~~~~~~~~~~~l~~sp-dg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 653 SGPAATKRKVIYCTSLNWSA-DGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp --------CCCCEEEEEECT-TSSEEEEEETTSEEEEEEC
T ss_pred cccccCCceeEEeeeEEEcC-CCCEEEEEcCCCeEEEEec
Confidence 01368899999 6799999999999999974
No 27
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=248.65 Aligned_cols=238 Identities=14% Similarity=0.184 Sum_probs=199.6
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++.++++++.|+. |++|++...... .....+...+.+++|+ ++.+|++++.||.|
T Consensus 78 gh~~~v~~~~~~~----~~~~l~s~s~D~~-----i~lWd~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v 146 (321)
T 3ow8_A 78 GHQLGVVSVDISH----TLPIAASSSLDAH-----IRLWDLENGKQI--KSIDAGPVDAWTLAFSPDSQYLATGTHVGKV 146 (321)
T ss_dssp CCSSCEEEEEECS----SSSEEEEEETTSE-----EEEEETTTTEEE--EEEECCTTCCCCEEECTTSSEEEEECTTSEE
T ss_pred cCCCCEEEEEECC----CCCEEEEEeCCCc-----EEEEECCCCCEE--EEEeCCCccEEEEEECCCCCEEEEEcCCCcE
Confidence 4778899999999 7889999999975 779999653222 1223466789999999 88999999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF 171 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 171 (343)
++|++...+...... .|...|.+++|+ ++.+++++.||.|++||+++++ ....+..|.. .|.+++|+| +..|
T Consensus 147 ~i~~~~~~~~~~~~~---~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~-~~~~~~~h~~-~v~~l~~spd~~~l 221 (321)
T 3ow8_A 147 NIFGVESGKKEYSLD---TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAM-PIRSLTFSPDSQLL 221 (321)
T ss_dssp EEEETTTCSEEEEEE---CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSS-CCCEEEECTTSCEE
T ss_pred EEEEcCCCceeEEec---CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-EEEEEcccCC-ceeEEEEcCCCCEE
Confidence 999998655443332 477789999998 8999999999999999999984 5666666665 799999999 8899
Q ss_pred EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCC
Q 019258 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVG 251 (343)
Q Consensus 172 ~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~ 251 (343)
++++.|++|++||++. ...+..+.+|. ..|.+++|+|++. .+++|+.||+|++||+++......+
T Consensus 222 ~s~s~dg~i~iwd~~~---~~~~~~~~~h~-------~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~---- 286 (321)
T 3ow8_A 222 VTASDDGYIKIYDVQH---ANLAGTLSGHA-------SWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTF---- 286 (321)
T ss_dssp EEECTTSCEEEEETTT---CCEEEEECCCS-------SCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEE----
T ss_pred EEEcCCCeEEEEECCC---cceeEEEcCCC-------CceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEE----
Confidence 9999999999999988 67777777665 7899999999986 5689999999999999986544443
Q ss_pred CCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEec
Q 019258 252 TGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 252 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~ 301 (343)
..|...|++++|+|++. .|++++.||+|++|+.
T Consensus 287 -------~~h~~~v~~v~~s~~g~----------~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 287 -------FDHQDQVWGVKYNGNGS----------KIVSVGDDQEIHIYDC 319 (321)
T ss_dssp -------CCCSSCEEEEEECTTSS----------EEEEEETTCCEEEEEC
T ss_pred -------cCCCCcEEEEEECCCCC----------EEEEEeCCCeEEEEeC
Confidence 46899999999999987 7999999999999996
No 28
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2e-33 Score=257.22 Aligned_cols=237 Identities=15% Similarity=0.155 Sum_probs=199.4
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCc-cCCCCCCeeEEEcc-CCCeEEEEcCCCc
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHS-QWTPPTRISSLSTS-HQSLVAASTLSGS 93 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~-~~~~~~~v~~v~~~-~~~~l~~~s~dg~ 93 (343)
.|...|.+++|+| ++++|++|+.|+. |++|++... .++. ...|...|.+++|+ ++++|++|+.|++
T Consensus 148 ~h~~~V~~v~~~~----~~~~l~sgs~D~~-----i~iwd~~~~---~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~ 215 (410)
T 1vyh_C 148 GHTDSVQDISFDH----SGKLLASCSADMT-----IKLWDFQGF---ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT 215 (410)
T ss_dssp CCSSCEEEEEECT----TSSEEEEEETTSC-----CCEEETTSS---CEEECCCCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred ccCCcEEEEEEcC----CCCEEEEEeCCCe-----EEEEeCCCC---ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 4778999999999 8899999999976 569999542 2222 24688899999999 8889999999999
Q ss_pred EEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC----
Q 019258 94 LHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS---- 167 (343)
Q Consensus 94 v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~---- 167 (343)
|++||+.....+... ..|...|.++.++ +..+++++.|++|++||+.++. ....+..|.. .|.+++|+|
T Consensus 216 i~~wd~~~~~~~~~~---~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-~~~~~~~h~~-~v~~~~~~~~~~~ 290 (410)
T 1vyh_C 216 IKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-CKAELREHRH-VVECISWAPESSY 290 (410)
T ss_dssp EEEEETTTCCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEEECCCSS-CEEEEEECCSCGG
T ss_pred EEEEECCCCcEEEEE---eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-eeeEecCCCc-eEEEEEEcCcccc
Confidence 999999866555433 2688999999998 8899999999999999999884 5555566665 799999988
Q ss_pred -----------------CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC
Q 019258 168 -----------------PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS 230 (343)
Q Consensus 168 -----------------~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d 230 (343)
+..+++|+.|++|++||++. +.++..+.+|. ..|.+++|+|++.. +++|+.|
T Consensus 291 ~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~---~~~~~~~~~h~-------~~v~~v~~~~~g~~-l~s~s~D 359 (410)
T 1vyh_C 291 SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST---GMCLMTLVGHD-------NWVRGVLFHSGGKF-ILSCADD 359 (410)
T ss_dssp GGGGGCCSCC-------CCEEEEEETTSEEEEEETTT---TEEEEEEECCS-------SCEEEEEECSSSSC-EEEEETT
T ss_pred cchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC---CceEEEEECCC-------CcEEEEEEcCCCCE-EEEEeCC
Confidence 34799999999999999998 77788887765 78999999999875 5799999
Q ss_pred CcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEec
Q 019258 231 GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 231 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~ 301 (343)
|+|++||+++.+....+ .+|...|++++|+|+++ .|+++|.||+|++|+.
T Consensus 360 ~~i~vwd~~~~~~~~~~-----------~~h~~~v~~l~~~~~~~----------~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 360 KTLRVWDYKNKRCMKTL-----------NAHEHFVTSLDFHKTAP----------YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp TEEEEECCTTSCCCEEE-----------ECCSSCEEEEEECSSSS----------CEEEEETTSEEEEEC-
T ss_pred CeEEEEECCCCceEEEE-----------cCCCCcEEEEEEcCCCC----------EEEEEeCCCcEEEEeC
Confidence 99999999875544433 46899999999999988 7999999999999985
No 29
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-35 Score=275.01 Aligned_cols=300 Identities=10% Similarity=-0.001 Sum_probs=213.9
Q ss_pred ccccCCcccceeeEEecCCCCCC-----CCeEEEEeecCCC--------------CCCceeeeeCCCCCCC-CCCccC-C
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPL-----SKLAVLAIYDTDA--------------DSPSLETHSISLPASL-TPHSQW-T 69 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~-----~~~l~t~s~D~~~--------------~~~~l~~w~~~~~~~~-~~~~~~-~ 69 (343)
....+.++..|.+|+|+|..... ..+||+|+.+... ..-+|++|++...... .....+ .
T Consensus 126 ~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~ 205 (524)
T 2j04_B 126 RGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVH 205 (524)
T ss_dssp CEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEE
T ss_pred ceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEe
Confidence 34455567899999999942111 1577776644210 0114789998543211 001112 3
Q ss_pred CCCCeeEEEcc-C------CCeEEEEcCCCcEEEEEccCceee-----ee---eccCCccccCeEEEEec-CCEEEEEeC
Q 019258 70 PPTRISSLSTS-H------QSLVAASTLSGSLHVLSSAMQVLL-----SV---DENSGFHVGPISGVDLT-GSECVSVGE 133 (343)
Q Consensus 70 ~~~~v~~v~~~-~------~~~l~~~s~dg~v~v~~~~~~~~~-----~~---~~~~~~h~~~v~~~~~~-~~~~~s~s~ 133 (343)
|.+.|.+++|+ + +.+|++++.||+|++|++...... .. .....+|...|++++|+ +..|++|+.
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~ 285 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFK 285 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEET
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeC
Confidence 56889999999 3 368999999999999999743211 00 01223688999999998 779999999
Q ss_pred CCcEEEEECCCCceEEEEEcCCCccceEEE--EeCC-C-CEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCccc
Q 019258 134 DGRVNLVSVIGGGEFKRVYDGNGLVGFNCV--KWAS-P-TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209 (343)
Q Consensus 134 dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~--~~~~-~-~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (343)
||+|++||++++..+...+..|.. .|.++ .|.+ + ..|++++.|++|++||++. .+++..+.++.. . .
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~-~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~---~~~~~~~~~~~~-~----~ 356 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDS-YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD---IATTKTTVSRFR-G----S 356 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSS-CEEEEEEECCTTSCCEEEEEETTSEEEEECGGG---HHHHCEEEEECS-C----C
T ss_pred CCEEEEEECCCCCCceEEeecccc-cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC---CCcccccccccc-c----C
Confidence 999999999876444444556666 79999 4566 4 6899999999999999998 666666655431 0 2
Q ss_pred CeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEE
Q 019258 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMF 289 (343)
Q Consensus 210 ~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s 289 (343)
.|.+++|+|++.. +++++.|++|++||++.......+. +|.+.|++|+|+|+++ .|++
T Consensus 357 ~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~-----------gH~~~V~sva~Sp~g~----------~l~S 414 (524)
T 2j04_B 357 NLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFAVHPLV-----------SRETTITAIGVSRLHP----------MVLA 414 (524)
T ss_dssp SCCCEEEETTTTE-EEEECSSSEEEEEETTCTTCCEEEE-----------ECSSCEEEEECCSSCC----------BCEE
T ss_pred cccceEeCCCcCe-EEEeCCCCcEEEEECcccccceeee-----------cCCCceEEEEeCCCCC----------eEEE
Confidence 4889999998765 6789999999999999866555443 5999999999999988 7999
Q ss_pred EecCCeEEEEecCCCcc----------------------------------------------cccccccccceeeecCC
Q 019258 290 CSEDGILAVVEQGEEPF----------------------------------------------ELLAEPCAINSFDIDPQ 323 (343)
Q Consensus 290 ~s~dg~i~~~~~~~~~~----------------------------------------------~~~~~~~~i~s~~~~~~ 323 (343)
||.||+|++|+...... .+..+..+|++++|+|+
T Consensus 415 gs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~ 494 (524)
T 2j04_B 415 GSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNET 494 (524)
T ss_dssp EETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCS
T ss_pred EECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCC
Confidence 99999999987321100 00011257999999995
Q ss_pred C--CCeeEEccCCceEEEEe
Q 019258 324 N--PSDVICSLEWESIAIVS 341 (343)
Q Consensus 324 ~--~~~l~~~~~~~~i~~~~ 341 (343)
. +..|++|+.++.|++|+
T Consensus 495 ~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 495 SAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp TTTTTEEEEECTTSEEEEEE
T ss_pred CCccHHHHhhccCceEEEEE
Confidence 3 45899999999999996
No 30
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.7e-33 Score=248.33 Aligned_cols=241 Identities=15% Similarity=0.094 Sum_probs=196.6
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC-CC-CccCCCCCCeeEEEccCCCeEEEEcCCCc
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL-TP-HSQWTPPTRISSLSTSHQSLVAASTLSGS 93 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~-~~-~~~~~~~~~v~~v~~~~~~~l~~~s~dg~ 93 (343)
.|...|.+++|+| ++++|++|+.|+. +++|++...... .. .....|.+.|.++.|+++..+++++.|+.
T Consensus 95 ~~~~~v~~~~~s~----~~~~l~s~~~d~~-----v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~ 165 (340)
T 1got_B 95 LRSSWVMTCAYAP----SGNYVACGGLDNI-----CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165 (340)
T ss_dssp CSSSCEEEEEECT----TSSEEEEEETTCE-----EEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSC
T ss_pred cCCccEEEEEECC----CCCEEEEEeCCCe-----EEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCc
Confidence 3667899999999 8899999999965 679999653211 11 22346889999999996667999999999
Q ss_pred EEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCE
Q 019258 94 LHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTE 170 (343)
Q Consensus 94 v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 170 (343)
|++||+...+.+... .+|.+.|.++.|+ +..+++++.|++|++||++++. ....+..|.. .|.+++|+| ++.
T Consensus 166 i~~wd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~-~~~~~~~h~~-~v~~v~~~p~~~~ 240 (340)
T 1got_B 166 CALWDIETGQQTTTF---TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHES-DINAICFFPNGNA 240 (340)
T ss_dssp EEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-EEEEECCCSS-CEEEEEECTTSSE
T ss_pred EEEEECCCCcEEEEE---cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-eEEEEcCCcC-CEEEEEEcCCCCE
Confidence 999999876655433 3699999999998 7899999999999999999884 5566666666 899999999 889
Q ss_pred EEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecC
Q 019258 171 FVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGV 250 (343)
Q Consensus 171 l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~ 250 (343)
|++++.|++|++||++. .+++..+.. .... ..|.+++|+|++. ++++|+.||.|++||+++..... .+
T Consensus 241 l~s~s~d~~v~iwd~~~---~~~~~~~~~-~~~~----~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~-~~-- 308 (340)
T 1got_B 241 FATGSDDATCRLFDLRA---DQELMTYSH-DNII----CGITSVSFSKSGR-LLLAGYDDFNCNVWDALKADRAG-VL-- 308 (340)
T ss_dssp EEEEETTSCEEEEETTT---TEEEEEECC-TTCC----SCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEE-EE--
T ss_pred EEEEcCCCcEEEEECCC---CcEEEEEcc-CCcc----cceEEEEECCCCC-EEEEECCCCeEEEEEcccCcEee-Ee--
Confidence 99999999999999988 555555432 1111 4699999999986 56899999999999998755433 33
Q ss_pred CCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEe
Q 019258 251 GTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVE 300 (343)
Q Consensus 251 ~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~ 300 (343)
.+|.+.|.+++|+|++. .|+++|.||+|++|+
T Consensus 309 --------~~h~~~v~~~~~s~dg~----------~l~s~s~D~~i~iWd 340 (340)
T 1got_B 309 --------AGHDNRVSCLGVTDDGM----------AVATGSWDSFLKIWN 340 (340)
T ss_dssp --------ECCSSCEEEEEECTTSS----------CEEEEETTSCEEEEC
T ss_pred --------ecCCCcEEEEEEcCCCC----------EEEEEcCCccEEecC
Confidence 57999999999999987 799999999999996
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.7e-33 Score=262.80 Aligned_cols=272 Identities=14% Similarity=0.166 Sum_probs=222.2
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++++|++++.|+. +++|++.... ......|...|.+++|+ ++..|++++.||.|
T Consensus 301 ~h~~~v~~~~~~~----~~~~l~t~~~d~~-----i~~w~~~~~~---~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 368 (577)
T 2ymu_A 301 GHSSSVWGVAFSP----DGQTIASASDDKT-----VKLWNRNGQH---LQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 368 (577)
T ss_dssp CCSSCEEEEEECT----TSSEEEEEETTSC-----EEEEETTSCE---EEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred cCCCCeEEEEECC----CCCEEEEEeCCCe-----EEEEeCCCCe---eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 4778899999999 8899999999865 7799985432 23334678899999999 88999999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF 171 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 171 (343)
++|+... +.+... ..|...|.+++|+ ++.+++++.|+.|++||.... ....+..|.. .|.+++|+| +..+
T Consensus 369 ~~~~~~~-~~~~~~---~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~--~~~~~~~~~~-~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 369 KLWNRNG-QLLQTL---TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQTLTGHSS-SVWGVAFSPDDQTI 441 (577)
T ss_dssp EEEETTC-CEEEEE---ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCC--EEEEEECCSS-CEEEEEECTTSSEE
T ss_pred EEEcCCC-CEEEEe---cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC--EEEEecCCCC-CeEEEEECCCCCEE
Confidence 9999753 223222 2588999999998 889999999999999996543 4444455665 799999999 8899
Q ss_pred EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCC
Q 019258 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVG 251 (343)
Q Consensus 172 ~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~ 251 (343)
++++.|++|++||.. ++.+..+..+. ..|.+++|+|++. ++++++.|+.|++||.. ++.... +
T Consensus 442 ~~~~~d~~v~~w~~~----~~~~~~~~~~~-------~~v~~~~~spd~~-~las~~~d~~i~iw~~~-~~~~~~-~--- 504 (577)
T 2ymu_A 442 ASASDDKTVKLWNRN----GQLLQTLTGHS-------SSVRGVAFSPDGQ-TIASASDDKTVKLWNRN-GQLLQT-L--- 504 (577)
T ss_dssp EEEETTSEEEEEETT----SCEEEEEECCS-------SCEEEEEECTTSC-EEEEEETTSEEEEEETT-SCEEEE-E---
T ss_pred EEEcCCCEEEEEECC----CCEEEEEcCCC-------CCEEEEEEcCCCC-EEEEEeCCCEEEEEcCC-CCEEEE-E---
Confidence 999999999999963 46667777665 7899999999976 56899999999999964 343333 3
Q ss_pred CCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-ccccccccccceeeecCCCCCeeEE
Q 019258 252 TGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLAEPCAINSFDIDPQNPSDVIC 330 (343)
Q Consensus 252 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~~~~~i~s~~~~~~~~~~l~~ 330 (343)
.+|...|.+|+|+|++. +|++++.||.|++|+...+. ..+..+..+|.+++|+| ++++|++
T Consensus 505 -------~~h~~~v~~l~~s~dg~----------~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~-dg~~l~s 566 (577)
T 2ymu_A 505 -------TGHSSSVRGVAFSPDGQ----------TIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSP-DGQTIAS 566 (577)
T ss_dssp -------ECCSSCEEEEEECTTSS----------CEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECT-TSSCEEE
T ss_pred -------eCCCCCEEEEEEcCCCC----------EEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcC-CCCEEEE
Confidence 56999999999999987 79999999999999976443 34444567899999999 6799999
Q ss_pred ccCCceEEEEe
Q 019258 331 SLEWESIAIVS 341 (343)
Q Consensus 331 ~~~~~~i~~~~ 341 (343)
++.|+.|++|+
T Consensus 567 ~~~D~~i~~Wd 577 (577)
T 2ymu_A 567 ASSDKTVKLWN 577 (577)
T ss_dssp EETTSCEEEEC
T ss_pred EeCCCEEEEeC
Confidence 99999999996
No 32
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.7e-33 Score=266.79 Aligned_cols=294 Identities=10% Similarity=0.082 Sum_probs=221.2
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCC---
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLS--- 91 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~d--- 91 (343)
.|...|.+++|+| ++++||+|+.|+. +++|++.............|.+.|.+++|+ ++.+|++++.+
T Consensus 57 ~h~~~v~~~~~sp----dg~~lasg~~d~~-----v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~ 127 (611)
T 1nr0_A 57 EHSHQTTVAKTSP----SGYYCASGDVHGN-----VRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 127 (611)
T ss_dssp CCSSCEEEEEECT----TSSEEEEEETTSE-----EEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC
T ss_pred CCCCceEEEEECC----CCcEEEEEeCCCC-----EEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCc
Confidence 5888999999999 8999999999975 779998532222112234678999999999 88888888765
Q ss_pred -CcEEEEEccCceeeeeeccCCccccCeEEEEec--CC-EEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC
Q 019258 92 -GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GS-ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS 167 (343)
Q Consensus 92 -g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~-~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 167 (343)
+.|++|+... .. ....+|.+.|++++|+ +. .+++++.|++|++||..+.+ ....+..|.. .|.+++|+|
T Consensus 128 ~~~v~~wd~~~--~~---~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-~~~~l~~H~~-~V~~v~fsp 200 (611)
T 1nr0_A 128 FGHVFLFDTGT--SN---GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-FKSTFGEHTK-FVHSVRYNP 200 (611)
T ss_dssp SEEEEETTTCC--BC---BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-EEEEECCCSS-CEEEEEECT
T ss_pred eeEEEEeeCCC--Cc---ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-EeeeeccccC-ceEEEEECC
Confidence 4788887542 22 1234799999999999 44 69999999999999998874 5666677776 899999999
Q ss_pred -CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeee
Q 019258 168 -PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246 (343)
Q Consensus 168 -~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~ 246 (343)
+..|++++.|++|++||++. ++++..+.........|.+.|.+++|+|++. ++++|+.|++|++||+++++....
T Consensus 201 dg~~las~s~D~~i~lwd~~~---g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~~ 276 (611)
T 1nr0_A 201 DGSLFASTGGDGTIVLYNGVD---GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEKT 276 (611)
T ss_dssp TSSEEEEEETTSCEEEEETTT---CCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEECCCcEEEEECCC---CcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeee
Confidence 88999999999999999988 6666555310000001227899999999986 568999999999999987544332
Q ss_pred eecCCC--------------------------------CcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCC
Q 019258 247 LSGVGT--------------------------------GEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294 (343)
Q Consensus 247 ~~~~~~--------------------------------~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg 294 (343)
+..... .......+|...|++++|+|++. .|++++.||
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~----------~l~s~s~D~ 346 (611)
T 1nr0_A 277 IPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK----------TLFSADAEG 346 (611)
T ss_dssp EECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS----------EEEEEETTS
T ss_pred ecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC----------EEEEEeCCC
Confidence 211000 00012257999999999999987 799999999
Q ss_pred eEEEEecCCCc-cccc--ccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 295 ILAVVEQGEEP-FELL--AEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 295 ~i~~~~~~~~~-~~~~--~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+|++|+..... ...+ .+...|.++++++ + ..+++++.++.+++|+
T Consensus 347 ~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~-~-~~l~s~s~d~~v~~w~ 394 (611)
T 1nr0_A 347 HINSWDISTGISNRVFPDVHATMITGIKTTS-K-GDLFTVSWDDHLKVVP 394 (611)
T ss_dssp CEEEEETTTCCEEECSSCSCSSCEEEEEECT-T-SCEEEEETTTEEEEEC
T ss_pred cEEEEECCCCceeeecccCCcceEEEEEECC-C-CcEEEEEcCCceEEee
Confidence 99999976432 2222 2356799999997 3 5788888899999986
No 33
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.4e-33 Score=242.81 Aligned_cols=243 Identities=15% Similarity=0.129 Sum_probs=190.2
Q ss_pred CCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEEC
Q 019258 68 WTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSV 142 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~ 142 (343)
..|.+.|.+++|+ ++.+|++|+.|++|+||++...... ......+|.++|.+++|+ +..|++++.|++|++||+
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~-~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK-LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBC-CCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcE-EEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 3688999999999 8899999999999999999732111 112224799999999995 679999999999999999
Q ss_pred CCCc-eEEEEEcCCCccceEEEEeCC---CCEEEEEeCCCcEEEEEccccCCCC-CeeEEecccCCCCCcccCeEEEEEc
Q 019258 143 IGGG-EFKRVYDGNGLVGFNCVKWAS---PTEFVTGGFGYGLQWWDLRRAGSGG-PVLQFKGNFGSQGKASGMIHSVDIH 217 (343)
Q Consensus 143 ~~~~-~~~~~~~~~~~~~v~~~~~~~---~~~l~t~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~v~~~ 217 (343)
+++. .....+..|.. .|.+++|+| +..|++++.|++|++||++. ... ....+..|. ..|.+++|+
T Consensus 85 ~~~~~~~~~~~~~h~~-~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~--~~~~~~~~~~~h~-------~~v~~~~~~ 154 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSA-SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKE--NGTTSPIIIDAHA-------IGVNSASWA 154 (297)
T ss_dssp SSSCBCCCEEECCCSS-CEEEEEECCGGGCSEEEEEETTSEEEEEEBCS--SSCBCCEEEECCS-------SCEEEEEEC
T ss_pred CCCceEEEEEeecCCC-ceeEEEeCcCCCCcEEEEEECCCcEEEEEecC--CCceeeeeeeccc-------CccceEeec
Confidence 8753 12334445555 799999998 46899999999999999987 211 133455554 779999999
Q ss_pred CCC------------CeEEEEEecCCcEEEEEccCCcee---eeeecCCCCcccccCCccccEEEEEEeecC--CCCcCC
Q 019258 218 PSR------------KHTCLAGGSSGTVFAWDLRWQQQS---IVLSGVGTGEAVTHSLSESEVWEVQYDCHT--KSSNIS 280 (343)
Q Consensus 218 p~~------------~~~~~sg~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--~~~~~~ 280 (343)
|+. ..+|++|+.||+|++||++..... ...+ .+|...|.+|+|+|++ ..
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l----------~~H~~~V~~v~~sp~~~~~~---- 220 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL----------EGHSDWVRDVAWSPTVLLRS---- 220 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE----------CCCSSCEEEEEECCCCSSSE----
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe----------cCCCCceEEEEECCCCCCce----
Confidence 973 247899999999999999875432 2233 6799999999999985 33
Q ss_pred CCCccceEEEecCCeEEEEecCCCc----cccc---ccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 281 SSRVLPAMFCSEDGILAVVEQGEEP----FELL---AEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 281 ~~~~~~l~s~s~dg~i~~~~~~~~~----~~~~---~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+|+++|.||+|++|+..... ..++ .....|.+++|+| ++++|++++.|+.|++|+
T Consensus 221 -----~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 221 -----YMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp -----EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEE
T ss_pred -----EEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEE
Confidence 79999999999999875421 1222 2256799999999 679999999999999997
No 34
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.6e-32 Score=250.52 Aligned_cols=279 Identities=17% Similarity=0.207 Sum_probs=219.4
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEE
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVL 97 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~ 97 (343)
...+.|+|++ +++|++|. |+. |++|++........+....|...|++|+|+ ++.+|++|+.||.|++|
T Consensus 106 ~y~~~l~wS~-----~n~lAvgl-d~t-----V~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iW 174 (420)
T 4gga_A 106 YYLNLVDWSS-----GNVLAVAL-DNS-----VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLW 174 (420)
T ss_dssp TTCBCEEECT-----TSEEEEEE-TTE-----EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ccceeEEECC-----CCEEEEEe-CCE-----EEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEE
Confidence 3577899998 34777664 754 779999654333333334677889999999 88999999999999999
Q ss_pred EccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeC
Q 019258 98 SSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGF 176 (343)
Q Consensus 98 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~ 176 (343)
++...+.+... ..|...+.++.+++..+++++.|+.+++||..........+..|.. .+..+.+.+ +..+++++.
T Consensus 175 d~~~~~~~~~~---~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~-~~~~~~~~~~g~~l~s~~~ 250 (420)
T 4gga_A 175 DVQQQKRLRNM---TSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGN 250 (420)
T ss_dssp ETTTTEEEEEE---CCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEET
T ss_pred EcCCCcEEEEE---eCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccccc-ceeeeeecCCCCeeeeeec
Confidence 99876655443 3699999999999999999999999999999876556666666766 799999999 889999999
Q ss_pred CCcEEEEEccccCCC-CCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEE--ecCCcEEEEEccCCceeeeeecCCCC
Q 019258 177 GYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG--GSSGTVFAWDLRWQQQSIVLSGVGTG 253 (343)
Q Consensus 177 d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg--~~dg~v~iwd~~~~~~~~~~~~~~~~ 253 (343)
|+.+++||.+.+... ..+.....+. +.|.+++|+|.+..+++++ +.|++|++||++++.....+.
T Consensus 251 D~~v~i~~~~~~~~~~~~~~~~~~~~-------~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~----- 318 (420)
T 4gga_A 251 DNLVNVWPSAPGEGGWVPLQTFTQHQ-------GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----- 318 (420)
T ss_dssp TSCEEEEESSCCSSCSCCSEEECCCS-------SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE-----
T ss_pred cccceEEeeccccccceeeeeecccC-------CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec-----
Confidence 999999999871111 1233343333 7899999999988887764 579999999999876555544
Q ss_pred cccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe--cCCeEEEEecCCC--cccccccccccceeeecCCCCCeeE
Q 019258 254 EAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS--EDGILAVVEQGEE--PFELLAEPCAINSFDIDPQNPSDVI 329 (343)
Q Consensus 254 ~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s--~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~~~~l~ 329 (343)
+...+..+.|+|++. .+++++ .||.|++|+.... ..++..+..+|.+++++| +|.+|+
T Consensus 319 -------~~~~v~~~~~~~~~~----------~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp-dg~~l~ 380 (420)
T 4gga_A 319 -------AHSQVCSILWSPHYK----------ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-DGATVA 380 (420)
T ss_dssp -------CSSCEEEEEEETTTT----------EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSCEE
T ss_pred -------cccceeeeeecCCCC----------eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEE
Confidence 456799999999987 455544 7999999997532 344445567999999999 679999
Q ss_pred EccCCceEEEEeC
Q 019258 330 CSLEWESIAIVSR 342 (343)
Q Consensus 330 ~~~~~~~i~~~~~ 342 (343)
+|+.|+.|++|+-
T Consensus 381 S~s~D~tvriWdv 393 (420)
T 4gga_A 381 SAAADETLRLWRC 393 (420)
T ss_dssp EEETTTEEEEECC
T ss_pred EEecCCeEEEEEC
Confidence 9999999999974
No 35
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.3e-33 Score=253.17 Aligned_cols=257 Identities=15% Similarity=0.139 Sum_probs=202.5
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCC----CC-CCCccCCCCCCeeEEEcc--CCCeEEEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPA----SL-TPHSQWTPPTRISSLSTS--HQSLVAAS 88 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~----~~-~~~~~~~~~~~v~~v~~~--~~~~l~~~ 88 (343)
.|...|.+++|+| ++++|++|+.|+. +++|++.... .. .......|.+.|.++.|. .+..|++|
T Consensus 106 ~h~~~v~~~~~s~----~g~~las~~~d~~-----v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~ 176 (380)
T 3iz6_a 106 LHCPWVMECAFAP----NGQSVACGGLDSA-----CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITG 176 (380)
T ss_dssp CCCTTCCCCEECT----TSSEEEECCSSSC-----CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEE
T ss_pred cCCCCEEEEEECC----CCCEEEEeeCCCc-----EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEE
Confidence 3667799999999 8999999999975 5699985421 11 112334688899999998 45679999
Q ss_pred cCCCcEEEEEccCceeeeee--ccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEE
Q 019258 89 TLSGSLHVLSSAMQVLLSVD--ENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCV 163 (343)
Q Consensus 89 s~dg~v~v~~~~~~~~~~~~--~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~ 163 (343)
+.|++|++||+...+.+... ....+|...|.++.++ ++.|++|+.|++|++||++........+..|.. .|.++
T Consensus 177 s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~-~v~~v 255 (380)
T 3iz6_a 177 SGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG-DINSV 255 (380)
T ss_dssp CTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSS-CCCEE
T ss_pred CCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCC-CeEEE
Confidence 99999999999876655443 2234699999999996 789999999999999999854345666667766 89999
Q ss_pred EeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCc
Q 019258 164 KWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ 242 (343)
Q Consensus 164 ~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~ 242 (343)
+|+| +..|++++.|++|++||++. ++++..+..+......+...+.+++|+|++. ++++|+.||.|++||+...+
T Consensus 256 ~~~p~~~~l~s~s~D~~i~lwd~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 256 KFFPDGQRFGTGSDDGTCRLFDMRT---GHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp EECTTSSEEEEECSSSCEEEEETTT---TEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCC
T ss_pred EEecCCCeEEEEcCCCeEEEEECCC---CcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCc
Confidence 9999 88999999999999999998 6666666543321111224589999999986 56789999999999998766
Q ss_pred eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 243 QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
....+.... .+|.+.|++++|+|++. .|++||.||+|++|+...
T Consensus 332 ~~~~~~~~~-------~~h~~~v~~l~~s~dg~----------~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 332 MVLNLGTLQ-------NSHEGRISCLGLSSDGS----------ALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EEEEECCSC-------SSCCCCCCEEEECSSSS----------EEEEECTTSCEEEEECCS
T ss_pred eEEEEeccc-------CCCCCceEEEEECCCCC----------EEEEeeCCCCEEEEecCC
Confidence 554443211 56999999999999988 799999999999999754
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-32 Score=251.07 Aligned_cols=273 Identities=14% Similarity=0.161 Sum_probs=219.7
Q ss_pred eeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEc
Q 019258 21 IDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLSS 99 (343)
Q Consensus 21 i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~ 99 (343)
+..+.|++ ..+++++.|+. |++|++...... ......|.+.|.+++|+ ++.+|++|+.||.|++|++
T Consensus 96 ~~~~~~s~------~~l~~~~~d~~-----v~lw~~~~~~~~-~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 96 LNLLDWSN------LNVVAVALERN-----VYVWNADSGSVS-ALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp CBCEEECT------TSEEEEEETTE-----EEEEETTTCCEE-EEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEeecC------CCEEEEECCCe-----EEEeeCCCCcEe-EeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence 45577776 23778888865 779999653322 23334578899999999 8899999999999999999
Q ss_pred cCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCC
Q 019258 100 AMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGY 178 (343)
Q Consensus 100 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~ 178 (343)
...+.+.... .|...|.++.|+++.+++++.||.|++||++........+..|.. .|.+++|+| +..|++++.|+
T Consensus 164 ~~~~~~~~~~---~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 164 ESQTKLRTMA---GHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS-EVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp TTCCEEEEEC---CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTS
T ss_pred cCCeEEEEec---CCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC-CeeEEEEcCCCCEEEEEeCCC
Confidence 8665544432 699999999999999999999999999999854445556666665 899999999 88999999999
Q ss_pred cEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe--cCCcEEEEEccCCceeeeeecCCCCccc
Q 019258 179 GLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG--SSGTVFAWDLRWQQQSIVLSGVGTGEAV 256 (343)
Q Consensus 179 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 256 (343)
.|++||++. ..++..+..+. ..|.+++|+|++..++++|+ .||.|++||+++......+.
T Consensus 240 ~v~iwd~~~---~~~~~~~~~~~-------~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-------- 301 (401)
T 4aez_A 240 VVQIWDARS---SIPKFTKTNHN-------AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-------- 301 (401)
T ss_dssp CEEEEETTC---SSEEEEECCCS-------SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--------
T ss_pred eEEEccCCC---CCccEEecCCc-------ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--------
Confidence 999999998 67777776655 78999999999888888876 79999999999865544433
Q ss_pred ccCCccccEEEEEEeecCCCCcCCCCCccceEEE--ecCCeEEEEecCCCcc----cccccccccceeeecCCCCCeeEE
Q 019258 257 THSLSESEVWEVQYDCHTKSSNISSSRVLPAMFC--SEDGILAVVEQGEEPF----ELLAEPCAINSFDIDPQNPSDVIC 330 (343)
Q Consensus 257 ~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~--s~dg~i~~~~~~~~~~----~~~~~~~~i~s~~~~~~~~~~l~~ 330 (343)
+...|.+++|+|++. .++++ +.||.|++|+...... ++..+...|.+++++| ++.+|++
T Consensus 302 ----~~~~v~~~~~s~~~~----------~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s 366 (401)
T 4aez_A 302 ----AGSQVTSLIWSPHSK----------EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP-DGRILST 366 (401)
T ss_dssp ----CSSCEEEEEECSSSS----------EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECT-TSSEEEE
T ss_pred ----CCCcEEEEEECCCCC----------eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECC-CCCEEEE
Confidence 567899999999988 67774 4899999999754321 2233457899999999 6799999
Q ss_pred ccCCceEEEEeC
Q 019258 331 SLEWESIAIVSR 342 (343)
Q Consensus 331 ~~~~~~i~~~~~ 342 (343)
++.|+.|++|+-
T Consensus 367 ~~~dg~i~iw~~ 378 (401)
T 4aez_A 367 AASDENLKFWRV 378 (401)
T ss_dssp ECTTSEEEEEEC
T ss_pred EeCCCcEEEEEC
Confidence 999999999974
No 37
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.9e-33 Score=247.09 Aligned_cols=259 Identities=12% Similarity=0.062 Sum_probs=196.0
Q ss_pred CCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCc
Q 019258 15 FPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGS 93 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~ 93 (343)
..|...|.+++|+| ++++|++|+.|+. +++|++.............|.+.|.+++|+ ++++|++++.|+.
T Consensus 58 ~~h~~~v~~~~~sp----~g~~l~s~s~D~~-----v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~ 128 (345)
T 3fm0_A 58 EGHQRTVRKVAWSP----CGNYLASASFDAT-----TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS 128 (345)
T ss_dssp SSCSSCEEEEEECT----TSSEEEEEETTSC-----EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccCCcEEEEEECC----CCCEEEEEECCCc-----EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe
Confidence 35788999999999 8999999999975 679998543211112234688999999999 8899999999999
Q ss_pred EEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCce-EEEEEcCCCccceEEEEeCC-CC
Q 019258 94 LHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGE-FKRVYDGNGLVGFNCVKWAS-PT 169 (343)
Q Consensus 94 v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~ 169 (343)
|++|++..............|...|.++.|+ +..+++++.|++|++||.+++.. ....+..|.. .|.+++|+| +.
T Consensus 129 v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~-~v~~l~~sp~g~ 207 (345)
T 3fm0_A 129 VWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHES-TVWSLAFDPSGQ 207 (345)
T ss_dssp EEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECTTSS
T ss_pred EEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCC-ceEEEEECCCCC
Confidence 9999998554433333334699999999998 88999999999999999987642 3345566666 899999999 88
Q ss_pred EEEEEeCCCcEEEEEccccCCCCC------------eeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEE
Q 019258 170 EFVTGGFGYGLQWWDLRRAGSGGP------------VLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237 (343)
Q Consensus 170 ~l~t~~~d~~i~iwd~~~~~~~~~------------~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd 237 (343)
.|++++.|++|++||.+....... +..+.+. +...|.+++|+|++.. +++++.|+.|++||
T Consensus 208 ~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~v~~~~~~~~-l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 208 RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGF------HSRTIYDIAWCQLTGA-LATACGDDAIRVFQ 280 (345)
T ss_dssp EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSS------CSSCEEEEEECTTTCC-EEEEETTSCEEEEE
T ss_pred EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCC------CCCcEEEEEEecCCCE-EEEEeCCCeEEEEE
Confidence 999999999999999865111111 1112221 2277999999998764 68999999999999
Q ss_pred ccCCcee---eeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC
Q 019258 238 LRWQQQS---IVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE 304 (343)
Q Consensus 238 ~~~~~~~---~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~ 304 (343)
.+....+ ..... .....+|...|++|+|+|+++. .|++||.||+|++|+...+
T Consensus 281 ~~~~~~~~~~~~~~~-----~~~~~~h~~~V~~v~~~p~~~~---------~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 281 EDPNSDPQQPTFSLT-----AHLHQAHSQDVNCVAWNPKEPG---------LLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp ECTTSCTTSCCEEEE-----EEETTSSSSCEEEEEECSSSTT---------EEEEEETTSCEEEEEECC-
T ss_pred eCCCCCcceeeEEEE-----eeecccccCcEeEeEEeCCCce---------EEEEcCCCCcEEEEEecCC
Confidence 8654221 10000 0011579999999999999865 7999999999999997543
No 38
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=252.03 Aligned_cols=285 Identities=16% Similarity=0.150 Sum_probs=213.5
Q ss_pred CcccceeeEEecCCCCCCC-CeEEEEee---cCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-C---CCeEEE
Q 019258 16 PQSKYIDAVRWLPPLSPLS-KLAVLAIY---DTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-H---QSLVAA 87 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~-~~l~t~s~---D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~---~~~l~~ 87 (343)
.|...|.+++|+| ++ .++++|+. |+ .+++|++.... ........|...|.+++|+ + +.+|++
T Consensus 16 ~h~~~v~~~~~~p----~~~~l~~~~s~~~~d~-----~v~iw~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 16 GFNYTVFDCKWVP----CSAKFVTMGNFARGTG-----VIQLYEIQHGD-LKLLREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp ECSSCEEEEEECT----TSSEEEEEEC--CCCE-----EEEEEEECSSS-EEEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred CCCCceEEEEEcC----CCceEEEecCccCCCc-----EEEEEeCCCCc-ccceeeecccCcEEEEEEcCCCCCCceEEE
Confidence 4888999999999 55 56667776 54 37799996532 2223345788999999999 4 599999
Q ss_pred EcCCCcEEEEEccCce-eeeeeccCCccccCeEEEEe------c--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCC--
Q 019258 88 STLSGSLHVLSSAMQV-LLSVDENSGFHVGPISGVDL------T--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNG-- 156 (343)
Q Consensus 88 ~s~dg~v~v~~~~~~~-~~~~~~~~~~h~~~v~~~~~------~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~-- 156 (343)
++.||.|++|++...+ .+... ..|...|.++.| + ++.+++++.||.|++||++++..+...+..+.
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 162 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSV---KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE 162 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEE---CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTS
T ss_pred ecCCCeEEEEeCCCCCccEEEE---EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCC
Confidence 9999999999998554 33322 369999999965 3 77999999999999999998753444443322
Q ss_pred -ccceEEEE----eCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcC---CCCeEEEEE
Q 019258 157 -LVGFNCVK----WAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP---SRKHTCLAG 227 (343)
Q Consensus 157 -~~~v~~~~----~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p---~~~~~~~sg 227 (343)
...+.++. |++ +..+++++.|+.|++||++. .+.. ....+. ..|.+++|+| ++. .+++|
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~-~~~~~~-------~~v~~~~~~~~~~~~~-~l~~~ 230 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRN---MALR-WETNIK-------NGVCSLEFDRKDISMN-KLVAT 230 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTT---TEEE-EEEECS-------SCEEEEEESCSSSSCC-EEEEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECcc---Ccee-eecCCC-------CceEEEEcCCCCCCCC-EEEEE
Confidence 23688888 667 88999999999999999988 4443 333333 7799999999 665 56789
Q ss_pred ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC---
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--- 304 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--- 304 (343)
+.||.|++||++.......+.. .....|...|.+++|+|++.. .+++++.||.|++|+....
T Consensus 231 ~~dg~i~i~d~~~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~---------~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 231 SLEGKFHVFDMRTQHPTKGFAS------VSEKAHKSTVWQVRHLPQNRE---------LFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp ESTTEEEEEEEEEEETTTEEEE------EEEECCSSCEEEEEEETTEEE---------EEEEEETTSEEEEEEEECCSCC
T ss_pred CCCCeEEEEeCcCCCcccceee------eccCCCcCCEEEEEECCCCCc---------EEEEEeCCCcEEEeecCCCccc
Confidence 9999999999987433222110 001368999999999998875 6999999999999996421
Q ss_pred ------------------cccccccccccceeeecCCCCCeeE-EccCCceEEEEe
Q 019258 305 ------------------PFELLAEPCAINSFDIDPQNPSDVI-CSLEWESIAIVS 341 (343)
Q Consensus 305 ------------------~~~~~~~~~~i~s~~~~~~~~~~l~-~~~~~~~i~~~~ 341 (343)
...+..+..+|.+++|+| ++.+|+ +++.|+.|++|+
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 296 SKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP-DKRGLCVCSSFDQTVRVLI 350 (357)
T ss_dssp --CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS-SSTTEEEEEETTSEEEEEE
T ss_pred ccccCCCCccccccccceeeccccCCCCeeEEEEcC-CCCeEEEEecCCCcEEEEE
Confidence 112223357899999999 567787 899999999997
No 39
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-33 Score=252.48 Aligned_cols=300 Identities=12% Similarity=0.133 Sum_probs=217.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCc---cCCCCCCeeEEEcc-C----CCeEEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHS---QWTPPTRISSLSTS-H----QSLVAA 87 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~---~~~~~~~v~~v~~~-~----~~~l~~ 87 (343)
.|...|.+++|+|........+++++.++ .+++|++........+. ...|...|.+++|+ + +.+|++
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~-----~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSN-----RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETT-----EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCC-----EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 58899999999994222344555555554 37799996433222222 22367889999999 4 568999
Q ss_pred EcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEE---cCCCccceE
Q 019258 88 STLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVY---DGNGLVGFN 161 (343)
Q Consensus 88 ~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~---~~~~~~~v~ 161 (343)
|+.||.|++|++...+.+.... .|..+|.++.|+ +..+++++.||.|++||+++++ ....+ ..+.. .|.
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~-~v~ 165 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYV---GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT-LVAIFGGVEGHRD-EVL 165 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEE---SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE-EEEEECSTTSCSS-CEE
T ss_pred ecCCCEEEEEEchhceEeeeec---CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe-EEEEecccccccC-cee
Confidence 9999999999998665554432 589999999997 6899999999999999999885 55554 44555 899
Q ss_pred EEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecc---------------------cCCCCCcccCeEEEEEcCC
Q 019258 162 CVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGN---------------------FGSQGKASGMIHSVDIHPS 219 (343)
Q Consensus 162 ~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~i~~v~~~p~ 219 (343)
+++|+| +..+++++.|+.|++||++. .+.+..+... ......+...|.+++|+
T Consensus 166 ~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 240 (366)
T 3k26_A 166 SADYDLLGEKIMSCGMDHSLKLWRINS---KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-- 240 (366)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEESCS---HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred EEEECCCCCEEEEecCCCCEEEEECCC---CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence 999999 88999999999999999986 3322222110 00000022789999998
Q ss_pred CCeEEEEEecCCcEEEEEccCCceeeeeecCCCC---cccccCCccccEEEEEEeec--CCCCcCCCCCccceEEEecCC
Q 019258 220 RKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTG---EAVTHSLSESEVWEVQYDCH--TKSSNISSSRVLPAMFCSEDG 294 (343)
Q Consensus 220 ~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~v~~~p~--~~~~~~~~~~~~~l~s~s~dg 294 (343)
+. ++++++.||.|++||+++...+......... .......|...|++++|+|+ +. .|++++.||
T Consensus 241 ~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~----------~l~~~~~dg 309 (366)
T 3k26_A 241 GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK----------MLALGNQVG 309 (366)
T ss_dssp TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS----------EEEEECTTS
T ss_pred CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc----------EEEEEecCC
Confidence 33 6789999999999999875431110000000 00011568889999999999 66 799999999
Q ss_pred eEEEEecCCCc-c-----ccccc--ccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 295 ILAVVEQGEEP-F-----ELLAE--PCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 295 ~i~~~~~~~~~-~-----~~~~~--~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.|++|+..... . .+..+ ..+|.+++|+| ++++|+++++++.|++|+.
T Consensus 310 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 310 KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR-DSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEEC
T ss_pred cEEEEECCCCCCccccceEEcccccCCceEEEEeCC-CCCeEEEEeCCCEEEEEEe
Confidence 99999986432 1 22223 47899999999 6799999999999999974
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.9e-34 Score=257.58 Aligned_cols=293 Identities=8% Similarity=-0.039 Sum_probs=204.2
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEc
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAAST 89 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s 89 (343)
+++.+ +...|.+++|+| ++++|++|+.|+. |++|++.............|.+.|.+++|+ ++++|++++
T Consensus 5 ~~~~~-~~~~v~~~~~s~----~g~~l~~~~~d~~-----i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 74 (377)
T 3dwl_C 5 QVLHI-LPKPSYEHAFNS----QRTEFVTTTATNQ-----VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS 74 (377)
T ss_dssp EEEEE-CSSCCSCCEECS----SSSEEECCCSSSC-----BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred eeEec-CCCcEEEEEECC----CCCEEEEecCCCE-----EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe
Confidence 34443 345899999999 8999999999975 569999653111112233688999999999 888999999
Q ss_pred CCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCce--EEEEEcC-CCccceEEEE
Q 019258 90 LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGE--FKRVYDG-NGLVGFNCVK 164 (343)
Q Consensus 90 ~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~--~~~~~~~-~~~~~v~~~~ 164 (343)
.||.|++|++...+..........|...|.++.|+ ++.|++++.|+.|++||++++.. ....+.. |.. .|.+++
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~-~v~~~~ 153 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS-TILSLD 153 (377)
T ss_dssp TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS-CEEEEE
T ss_pred CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC-CeEEEE
Confidence 99999999998554111122223689999999998 88999999999999999988642 2344444 555 899999
Q ss_pred eCC-CCEEEEEeCCCcEEEEEccccCC---------------CCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe
Q 019258 165 WAS-PTEFVTGGFGYGLQWWDLRRAGS---------------GGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228 (343)
Q Consensus 165 ~~~-~~~l~t~~~d~~i~iwd~~~~~~---------------~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~ 228 (343)
|+| +..|++++.|+.|++||++.... ++++..+ .+. ..|.+++|+|++. ++++|+
T Consensus 154 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~v~~~~~sp~~~-~l~~~~ 224 (377)
T 3dwl_C 154 WHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSG-------GWVHAVGFSPSGN-ALAYAG 224 (377)
T ss_dssp ECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCS-------SSEEEEEECTTSS-CEEEEE
T ss_pred EcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCC-------ceEEEEEECCCCC-EEEEEe
Confidence 999 78999999999999999963100 1112222 222 7899999999986 567999
Q ss_pred cCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc---
Q 019258 229 SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP--- 305 (343)
Q Consensus 229 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~--- 305 (343)
.||.|++||+++...+...... ...|...|.+++|+|++. +|++++.|+.+ +|+.....
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~v~~~~~s~~~~----------~l~~~~~~~~~-~~~~~~~~~~~ 286 (377)
T 3dwl_C 225 HDSSVTIAYPSAPEQPPRALIT-------VKLSQLPLRSLLWANESA----------IVAAGYNYSPI-LLQGNESGWAH 286 (377)
T ss_dssp TTTEEC-CEECSTTSCEEECCC-------EECSSSCEEEEEEEETTE----------EEEEESSSSEE-EECCCC---CC
T ss_pred CCCcEEEEECCCCCCcceeeEe-------ecCCCCceEEEEEcCCCC----------EEEEEcCCcEE-EEEeCCCceEE
Confidence 9999999999987663221110 156889999999999976 67787766666 55443110
Q ss_pred c---c-------------------------------cc-----------------ccccccceeeecCCCCC---eeEEc
Q 019258 306 F---E-------------------------------LL-----------------AEPCAINSFDIDPQNPS---DVICS 331 (343)
Q Consensus 306 ~---~-------------------------------~~-----------------~~~~~i~s~~~~~~~~~---~l~~~ 331 (343)
. + .+ .+...|+++.+.+..+. .++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~ 366 (377)
T 3dwl_C 287 TRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSS 366 (377)
T ss_dssp SBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEee
Confidence 0 0 00 02356888887653333 69999
Q ss_pred cCCceEEEEe
Q 019258 332 LEWESIAIVS 341 (343)
Q Consensus 332 ~~~~~i~~~~ 341 (343)
+.|+.|++|+
T Consensus 367 g~Dg~i~iWd 376 (377)
T 3dwl_C 367 GTDGRVVLWT 376 (377)
T ss_dssp ETTSEEEEEC
T ss_pred cCCCcEEEec
Confidence 9999999996
No 41
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.5e-32 Score=246.17 Aligned_cols=288 Identities=10% Similarity=0.067 Sum_probs=211.6
Q ss_pred CcccceeeEEecCCCCCCC-CeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc--CCCeEEEEcCCC
Q 019258 16 PQSKYIDAVRWLPPLSPLS-KLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS--HQSLVAASTLSG 92 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~-~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~--~~~~l~~~s~dg 92 (343)
.|...|.+++|+| ++ ++|++|+.|+. |++|++........+....|.+.|.+++|+ ++.+|++++.||
T Consensus 71 ~h~~~v~~~~~~~----~~~~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 71 PFDRRVTSLEWHP----THPTTVAVGSKGGD-----IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp CCSSCEEEEEECS----SCTTEEEEEEBTSC-----EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred CCCCCEEEEEECC----CCCCEEEEEcCCCe-----EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 5788999999999 66 89999999975 779999654333223334689999999999 358899999999
Q ss_pred cEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CC
Q 019258 93 SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PT 169 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 169 (343)
.|++|++... .+........|...|.+++|+ +..+++++.||.|++||++.. ....+..|.. .|.+++|+| +.
T Consensus 142 ~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~h~~-~v~~~~~~~~~~ 217 (383)
T 3ei3_B 142 ATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH--EIFKEKLHKA-KVTHAEFNPRCD 217 (383)
T ss_dssp EEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC--EEEEEECSSS-CEEEEEECSSCT
T ss_pred EEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC--EEEEeccCCC-cEEEEEECCCCC
Confidence 9999999853 333333333567889999999 899999999999999999543 4444455655 799999999 55
Q ss_pred -EEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcC-CCCeEEEEEecCCcEEEEEccCCceeeee
Q 019258 170 -EFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP-SRKHTCLAGGSSGTVFAWDLRWQQQSIVL 247 (343)
Q Consensus 170 -~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p-~~~~~~~sg~~dg~v~iwd~~~~~~~~~~ 247 (343)
.+++++.|+.|++||++.......+.....+. ..|.+++|+| ++. ++++++.||.|++||+++...+..+
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHE-------KPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECS-------SCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTSCSEE
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEecCC-------CceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCcccccc
Confidence 89999999999999998721112233333343 7899999999 765 5689999999999999887655444
Q ss_pred ecCCCCcccccCCcc----------ccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-c-ccccc--ccc
Q 019258 248 SGVGTGEAVTHSLSE----------SEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-P-FELLA--EPC 313 (343)
Q Consensus 248 ~~~~~~~~~~~~~h~----------~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~-~~~~~--~~~ 313 (343)
...... ...|. ..+..++|+|++. + +++.||.|++|+.... . ..+.. ...
T Consensus 290 ~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~s~dg~----------~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~ 353 (383)
T 3ei3_B 290 IIHPHR----QFQHLTPIKATWHPMYDLIVAGRYPDDQ----------L--LLNDKRTIDIYDANSGGLVHQLRDPNAAG 353 (383)
T ss_dssp EECCBC----CCTTSCCCCCEECSSSSEEEEECBCCTT----------T--CTTCCCCEEEEETTTCCEEEEECBTTBCS
T ss_pred cccccc----ccccccceEEeccCCCCceEEEecCCcc----------c--ccCCCCeEEEEecCCCceeeeecCCCCCc
Confidence 321100 01122 2344466666554 3 7889999999997432 2 23332 235
Q ss_pred ccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 314 AINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 314 ~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.+..++|+| ++.+|++|+ ++.|++|+-
T Consensus 354 ~~~~~~~s~-~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 354 IISLNKFSP-TGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp CCCEEEECT-TSSEEEEEE-TTEEEEEEC
T ss_pred eEEEEEEec-CccEEEEec-CCcEEEEec
Confidence 677789999 678999997 789999974
No 42
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-33 Score=256.30 Aligned_cols=295 Identities=10% Similarity=0.064 Sum_probs=219.3
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCC---CCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISL---PASLTPHSQWTPPTRISSLSTS-HQSLVAASTLS 91 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~---~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~d 91 (343)
.|...|.+|+|+| .++++|++|+.|+. |++|++.. .....+...+.|.+.|.+++|+ ++.+|++++.|
T Consensus 61 ~h~~~V~~~~~s~---~~~~~l~s~s~dg~-----v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 61 NEPNSITSSAVSP---GETPYLITGSDQGV-----IKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp TTTSCEEEEEEEC---SSSCEEEEEETTSE-----EEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCceEEEEECC---CCCCEEEEecCCce-----EEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 4678999999999 46789999999975 77999844 2223334455789999999999 78899999999
Q ss_pred CcEEEEEcc---Cceeee--------eeccCC-ccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCceEEEEEcC-
Q 019258 92 GSLHVLSSA---MQVLLS--------VDENSG-FHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGEFKRVYDG- 154 (343)
Q Consensus 92 g~v~v~~~~---~~~~~~--------~~~~~~-~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~- 154 (343)
|.|++|++. ..+... ...... .+...+.++.+. +..+++++.||.|++||+++++. ...+..
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~ 211 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER-LQIIENS 211 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE-EEEEECC
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee-eEEEccC
Confidence 999999995 222111 111110 155677777744 78999999999999999999854 444444
Q ss_pred -CCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEe-cccCCCCCcccCeEEEEEcCC---CCeEEEEEe
Q 019258 155 -NGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFK-GNFGSQGKASGMIHSVDIHPS---RKHTCLAGG 228 (343)
Q Consensus 155 -~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~v~~~p~---~~~~~~sg~ 228 (343)
|.. .|.+++|+| +..+++++.|+.|++||++. ++++..+. .+. .+|.+++++|. ...++++|+
T Consensus 212 ~h~~-~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~-------~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 212 PRHG-AVSSICIDEECCVLILGTTRGIIDIWDIRF---NVLIRSWSFGDH-------APITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp GGGC-CEEEEEECTTSCEEEEEETTSCEEEEETTT---TEEEEEEBCTTC-------EEEEEEEECTTTCTTEEEEEEES
T ss_pred CCCC-ceEEEEECCCCCEEEEEcCCCeEEEEEcCC---ccEEEEEecCCC-------CceEEEEeccccCCCccEEEEEc
Confidence 444 799999999 88999999999999999998 67777665 333 67999977764 234788999
Q ss_pred cCCcEEEEEccCCceeeeeecCCCCcc---c----------ccC--CccccEEEEEEeecCCCCcCCCCCccceEEEecC
Q 019258 229 SSGTVFAWDLRWQQQSIVLSGVGTGEA---V----------THS--LSESEVWEVQYDCHTKSSNISSSRVLPAMFCSED 293 (343)
Q Consensus 229 ~dg~v~iwd~~~~~~~~~~~~~~~~~~---~----------~~~--~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~d 293 (343)
.||.|++||+++++....+........ . ... .|...|++++|+ ++. .|++++.|
T Consensus 281 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~----------~l~s~~~d 349 (437)
T 3gre_A 281 SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK----------ILLTDEAT 349 (437)
T ss_dssp TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE----------EEEEEGGG
T ss_pred CCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce----------EEEecCCC
Confidence 999999999998765555442210000 0 001 288889999999 554 79999999
Q ss_pred CeEEEEecCCC--cccccc-------------------------------------cccccceeeecCC-CCCeeEEccC
Q 019258 294 GILAVVEQGEE--PFELLA-------------------------------------EPCAINSFDIDPQ-NPSDVICSLE 333 (343)
Q Consensus 294 g~i~~~~~~~~--~~~~~~-------------------------------------~~~~i~s~~~~~~-~~~~l~~~~~ 333 (343)
|.|++|+.... ...+.. +...|+++++.++ ++.+|++|++
T Consensus 350 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~ 429 (437)
T 3gre_A 350 SSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDN 429 (437)
T ss_dssp TEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEET
T ss_pred CeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcC
Confidence 99999996432 122221 3467899999874 3579999999
Q ss_pred CceEEEEe
Q 019258 334 WESIAIVS 341 (343)
Q Consensus 334 ~~~i~~~~ 341 (343)
++.|++|+
T Consensus 430 dG~I~iw~ 437 (437)
T 3gre_A 430 SGLIGIFQ 437 (437)
T ss_dssp TSCEEEEC
T ss_pred CceEEEeC
Confidence 99999995
No 43
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.6e-33 Score=250.59 Aligned_cols=288 Identities=14% Similarity=0.048 Sum_probs=219.1
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCC----CCCCCccCCCCCCeeEEEcc-C----C---C
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPA----SLTPHSQWTPPTRISSLSTS-H----Q---S 83 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~----~~~~~~~~~~~~~v~~v~~~-~----~---~ 83 (343)
.|...|.+|+|+| ++|++|+.|+. |++|++.... .........|...|.+++|+ + + .
T Consensus 14 ~h~~~i~~~~~~~------~~l~s~~~dg~-----i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~ 82 (397)
T 1sq9_A 14 AHDADIFSVSACN------SFTVSCSGDGY-----LKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 82 (397)
T ss_dssp CSSSCEEEEEECS------SEEEEEETTSE-----EEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred hhhcCeEEEEecC------CeEEEEcCCCE-----EEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc
Confidence 5889999999988 58999999975 7799996543 11123334688999999999 6 7 8
Q ss_pred eEEEEcCCCcEEEEEccCcee-----eeeeccCCcc-----ccCeEEEEec------CCE-EEEEeCCCcEEEEECCC--
Q 019258 84 LVAASTLSGSLHVLSSAMQVL-----LSVDENSGFH-----VGPISGVDLT------GSE-CVSVGEDGRVNLVSVIG-- 144 (343)
Q Consensus 84 ~l~~~s~dg~v~v~~~~~~~~-----~~~~~~~~~h-----~~~v~~~~~~------~~~-~~s~s~dg~v~~wd~~~-- 144 (343)
+|++++.||.|++|++...+. +.... .| ...|.++.|+ +.. +++++.||.|++||+++
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 159 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLD---LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA 159 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEEC---CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSS
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeec---ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccc
Confidence 999999999999999985443 33222 35 5899999997 778 99999999999999987
Q ss_pred ----CceEE-----EEE------cCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEec---c---cC
Q 019258 145 ----GGEFK-----RVY------DGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKG---N---FG 202 (343)
Q Consensus 145 ----~~~~~-----~~~------~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~---~---~~ 202 (343)
+.... .+. ..+.. .+.+++|+| + .+++++.|+.|++||++. .+++..+.. + .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~h~~~~- 233 (397)
T 1sq9_A 160 DESNSLTLNWSPTLELQGTVESPMTPSQ-FATSVDISERG-LIATGFNNGTVQISELST---LRPLYNFESQHSMINNS- 233 (397)
T ss_dssp SHHHHTTTCCCCEEEEEEEECCSSSSCC-CCCEEEECTTS-EEEEECTTSEEEEEETTT---TEEEEEEECCC---CCC-
T ss_pred cccccceeeccCcceeeeeeccccCCCC-CceEEEECCCc-eEEEEeCCCcEEEEECCC---CceeEEEeccccccccC-
Confidence 43222 332 22343 799999999 6 999999999999999998 677777776 4 3
Q ss_pred CCCCcccCeEEEEEcCCCCeEEEEEecC---CcEEEEEccCCceeeeeecCCC--CcccccCCccccEEEEEEeecCCCC
Q 019258 203 SQGKASGMIHSVDIHPSRKHTCLAGGSS---GTVFAWDLRWQQQSIVLSGVGT--GEAVTHSLSESEVWEVQYDCHTKSS 277 (343)
Q Consensus 203 ~~~~~~~~i~~v~~~p~~~~~~~sg~~d---g~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~ 277 (343)
..|.+++|+|++. ++++|+.| |.|++||+++.+....+..... ........|...|.+++|+|++.
T Consensus 234 ------~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-- 304 (397)
T 1sq9_A 234 ------NSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-- 304 (397)
T ss_dssp ------CCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS--
T ss_pred ------CccceEEECCCCC-EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC--
Confidence 7899999999976 56789999 9999999998654443320000 00000001889999999999987
Q ss_pred cCCCCCccceEEEecCCeEEEEecCCC--ccccc------cc---------------ccccceeeecCCCC---------
Q 019258 278 NISSSRVLPAMFCSEDGILAVVEQGEE--PFELL------AE---------------PCAINSFDIDPQNP--------- 325 (343)
Q Consensus 278 ~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~------~~---------------~~~i~s~~~~~~~~--------- 325 (343)
+|++++.||.|++|+.... ...+. .. ..+|++++++| ++
T Consensus 305 --------~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~-~g~~~~~~~~~ 375 (397)
T 1sq9_A 305 --------TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK-KGWRSGMGADL 375 (397)
T ss_dssp --------EEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC-TTTSBSTTCTT
T ss_pred --------EEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecc-ccccccccccc
Confidence 7999999999999997532 22333 23 57899999999 44
Q ss_pred -CeeEEccCCceEEEEe
Q 019258 326 -SDVICSLEWESIAIVS 341 (343)
Q Consensus 326 -~~l~~~~~~~~i~~~~ 341 (343)
.+|++|+.++.|++|+
T Consensus 376 ~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 376 NESLCCVCLDRSIRWFR 392 (397)
T ss_dssp SCEEEEEETTTEEEEEE
T ss_pred cceEEEecCCCcEEEEE
Confidence 6999999999999997
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.9e-32 Score=249.39 Aligned_cols=280 Identities=15% Similarity=0.136 Sum_probs=214.8
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEE
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLS 98 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~ 98 (343)
.+..++|+| ++++|++|+.|+. +++|++..... ...+.....+....|+ ++++|++++.||.|++|+
T Consensus 58 ~~~~~~~s~----~g~~l~~~~~d~~-----v~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 125 (420)
T 3vl1_A 58 AGKGNTFEK----VGSHLYKARLDGH-----DFLFNTIIRDG---SKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLD 125 (420)
T ss_dssp CCTTCEEEE----EETTEEEEEETTE-----EEEEECCSEET---TTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEEC
T ss_pred cccceeeee----cCCeEEEEEcCCc-----EEEEEecccce---eeEEecCCceEEEEEecCCCEEEEEECCCCEEEEe
Confidence 355899999 8999999999965 77999955322 2222333334444566 889999999999999999
Q ss_pred ccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEe
Q 019258 99 SAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGG 175 (343)
Q Consensus 99 ~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~ 175 (343)
+...+.... ...|.+.|++++|+ ++.+++++.|++|++||+++++.. ..+..|.. .|.+++|+| +..|++++
T Consensus 126 ~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~-~~~~~h~~-~v~~~~~~~~~~~l~s~~ 200 (420)
T 3vl1_A 126 SNFNLQREI---DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP-RTLIGHRA-TVTDIAIIDRGRNVLSAS 200 (420)
T ss_dssp TTSCEEEEE---TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC-EEEECCSS-CEEEEEEETTTTEEEEEE
T ss_pred CCCcceeee---cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc-eEEcCCCC-cEEEEEEcCCCCEEEEEc
Confidence 986554433 23699999999998 889999999999999999987544 44455655 799999999 88999999
Q ss_pred CCCcEEEEEccccCCCCCeeEEecccCCCCC-----------------cccCeEEEEEcCCCCeEEEEEecCCcEEEEEc
Q 019258 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGK-----------------ASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238 (343)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~ 238 (343)
.|++|++||++. ++++..+..+..+... +...+.+++|+|++. ++++|+.||.|++||+
T Consensus 201 ~d~~v~iwd~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 201 LDGTIRLWECGT---GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNV 276 (420)
T ss_dssp TTSCEEEEETTT---TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEET
T ss_pred CCCcEEEeECCC---CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEEC
Confidence 999999999998 6777777654322200 013344445577764 5689999999999999
Q ss_pred cCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC---cccccc-cccc
Q 019258 239 RWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE---PFELLA-EPCA 314 (343)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~---~~~~~~-~~~~ 314 (343)
++......+. ..|...|.+++|+|++.. +|++++.||.|++|+.... ...+.. +..+
T Consensus 277 ~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~---------~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 337 (420)
T 3vl1_A 277 FSKEQTIQLP----------SKFTCSCNSLTVDGNNAN---------YIYAGYENGMLAQWDLRSPECPVGEFLINEGTP 337 (420)
T ss_dssp TTCCEEEEEC----------CTTSSCEEEEEECSSCTT---------EEEEEETTSEEEEEETTCTTSCSEEEEESTTSC
T ss_pred CCCceeEEcc----------cccCCCceeEEEeCCCCC---------EEEEEeCCCeEEEEEcCCCcCchhhhhccCCCC
Confidence 9877666665 568899999999999886 7999999999999997543 223333 3467
Q ss_pred cceeeecCCCCCeeEEccCCceEEEEe
Q 019258 315 INSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 315 i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+.++.+.+ +.+|++++.|+.|++|+
T Consensus 338 v~~~~~~~--~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 338 INNVYFAA--GALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EEEEEEET--TEEEEEETTTEEEEEEE
T ss_pred ceEEEeCC--CCEEEEecCCccEEEEe
Confidence 88887664 57999999999999997
No 45
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=239.17 Aligned_cols=279 Identities=10% Similarity=0.060 Sum_probs=222.7
Q ss_pred CCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc-CCCCCCeeEEEcc-CCCeEEEEcCCC
Q 019258 15 FPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ-WTPPTRISSLSTS-HQSLVAASTLSG 92 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~-~~~~~~v~~v~~~-~~~~l~~~s~dg 92 (343)
..|...|.+++|+| ++++|++|+.|+. |++|++.... ++.. ..|.+.|.+++|+ ++++|++++.||
T Consensus 29 ~~h~~~v~~~~~s~----~~~~l~~~~~dg~-----i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 29 TGHERPLTQVKYNK----EGDLLFSCSKDSS-----ASVWYSLNGE---RLGTLDGHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp ECCSSCEEEEEECT----TSCEEEEEESSSC-----EEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred EEeeceEEEEEEcC----CCCEEEEEeCCCE-----EEEEeCCCch---hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 36889999999999 8899999999975 7799996532 2233 3588999999999 889999999999
Q ss_pred cEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCC-----CcEEEEECCCCce-----------EEEEEcC
Q 019258 93 SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGED-----GRVNLVSVIGGGE-----------FKRVYDG 154 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~d-----g~v~~wd~~~~~~-----------~~~~~~~ 154 (343)
.|++|++...+.+.... |..+|.++.|+ +..+++++.+ |.|.+||+..... .......
T Consensus 97 ~i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 172 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH 172 (369)
T ss_dssp EEEEEETTTCCEEEEEE----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC
T ss_pred eEEEEECCCCcEEEEee----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCC
Confidence 99999998666554442 67799999999 8899999999 9999999965421 1222222
Q ss_pred CCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcE
Q 019258 155 NGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTV 233 (343)
Q Consensus 155 ~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v 233 (343)
.....+.+++|++ +..+++++.|+.|++||++. ...++..+..+. ..|.+++|+|++. ++++++.||.|
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~-------~~v~~~~~~~~~~-~l~~~~~d~~i 242 (369)
T 3zwl_B 173 EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN--NYEYVDSIDLHE-------KSISDMQFSPDLT-YFITSSRDTNS 242 (369)
T ss_dssp TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT--TTEEEEEEECCS-------SCEEEEEECTTSS-EEEEEETTSEE
T ss_pred cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC--CcEeEEEEecCC-------CceeEEEECCCCC-EEEEecCCceE
Confidence 2222699999999 88999999999999999987 345555666554 7899999999876 56789999999
Q ss_pred EEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCC--------------eEEEE
Q 019258 234 FAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG--------------ILAVV 299 (343)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg--------------~i~~~ 299 (343)
++||+++......+. +...+..++|+|++. .+++++.++ .+++|
T Consensus 243 ~v~d~~~~~~~~~~~------------~~~~~~~~~~~~~~~----------~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (369)
T 3zwl_B 243 FLVDVSTLQVLKKYE------------TDCPLNTAVITPLKE----------FIILGGGQEAKDVTTTSANEGKFEARFY 300 (369)
T ss_dssp EEEETTTCCEEEEEE------------CSSCEEEEEECSSSS----------EEEEEECCC-------------CEEEEE
T ss_pred EEEECCCCceeeeec------------CCCCceeEEecCCCc----------eEEEeecCCCceEEEEecCCCcceeEEE
Confidence 999999865554443 678899999999988 788888888 78999
Q ss_pred ecCCC--cccccccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 300 EQGEE--PFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 300 ~~~~~--~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
+.... ...+..+..+|.+++++| ++++|++++.|+.|++|+-
T Consensus 301 d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 301 HKIFEEEIGRVQGHFGPLNTVAISP-QGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEEE
T ss_pred ecCCCcchhheecccCcEEEEEECC-CCCEEEEEcCCCeEEEEEC
Confidence 87533 223334467899999999 6799999999999999973
No 46
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.4e-32 Score=242.88 Aligned_cols=240 Identities=17% Similarity=0.139 Sum_probs=194.0
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCC---C-CCCccCCCCCCeeEEEcc-CCCeEEEEcCC
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPAS---L-TPHSQWTPPTRISSLSTS-HQSLVAASTLS 91 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~---~-~~~~~~~~~~~v~~v~~~-~~~~l~~~s~d 91 (343)
+...|.+++|+| ++.++++|+.|+. +++|++..... . .......|.+.|.++.|+ ++..|++++.|
T Consensus 105 ~~~~v~~~~~sp----~g~~lasg~~d~~-----i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D 175 (354)
T 2pbi_B 105 PCTWVMACAYAP----SGCAIACGGLDNK-----CSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD 175 (354)
T ss_dssp SSSCCCEEEECT----TSSEEEEESTTSE-----EEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCCEEEEEECC----CCCEEEEeeCCCC-----EEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC
Confidence 456789999999 8999999999975 66998853211 1 112223588899999999 77899999999
Q ss_pred CcEEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC
Q 019258 92 GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS 167 (343)
Q Consensus 92 g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 167 (343)
|+|++||+...+.+.... +|...|.++++. +..|++++.||+|++||+++++ +...+..|.. .|.+++|+|
T Consensus 176 ~~v~lwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~-~~~~~~~h~~-~v~~v~~~p 250 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFH---GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ-CVQAFETHES-DVNSVRYYP 250 (354)
T ss_dssp SEEEEEETTTCCEEEEEE---CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC-EEEEECCCSS-CEEEEEECT
T ss_pred CcEEEEeCCCCeEEEEEc---CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc-EEEEecCCCC-CeEEEEEeC
Confidence 999999998766554432 688999999886 5799999999999999999985 5666666766 899999999
Q ss_pred -CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeee
Q 019258 168 -PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIV 246 (343)
Q Consensus 168 -~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~ 246 (343)
+..|++++.|++|++||++. ...+..+..+. ....+.+++|+|++. ++++|+.||+|++||++++... .
T Consensus 251 ~~~~l~s~s~D~~v~lwd~~~---~~~~~~~~~~~-----~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~-~ 320 (354)
T 2pbi_B 251 SGDAFASGSDDATCRLYDLRA---DREVAIYSKES-----IIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKGSRV-S 320 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTT---TEEEEEECCTT-----CCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEE-E
T ss_pred CCCEEEEEeCCCeEEEEECCC---CcEEEEEcCCC-----cccceeEEEEeCCCC-EEEEEECCCcEEEEECCCCceE-E
Confidence 88999999999999999988 55544443221 114689999999986 5689999999999999875543 3
Q ss_pred eecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEe
Q 019258 247 LSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVE 300 (343)
Q Consensus 247 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~ 300 (343)
.+ .+|.+.|++++|+|++. +|+++|.||+|++|+
T Consensus 321 ~l----------~~h~~~v~~l~~spdg~----------~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 321 IL----------FGHENRVSTLRVSPDGT----------AFCSGSWDHTLRVWA 354 (354)
T ss_dssp EE----------CCCSSCEEEEEECTTSS----------CEEEEETTSEEEEEC
T ss_pred EE----------ECCCCcEEEEEECCCCC----------EEEEEcCCCCEEecC
Confidence 34 57999999999999988 799999999999995
No 47
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.1e-34 Score=252.08 Aligned_cols=246 Identities=15% Similarity=0.236 Sum_probs=187.8
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc---CCCeEEEEcCCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS---HQSLVAASTLSG 92 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~---~~~~l~~~s~dg 92 (343)
.|...|.+++|+| ++++|++|+.|+. +++|++.............|.+.|.+++|+ ++.+|++++.|+
T Consensus 11 ~H~~~V~~v~~s~----~g~~lasgs~D~~-----v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 11 SHEDMIHDAQMDY----YGTRLATCSSDRS-----VKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp ---CCEEEEEECG----GGCEEEEEETTTE-----EEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS
T ss_pred cccCeEEEeeEcC----CCCEEEEEeCCCe-----EEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC
Confidence 6889999999999 8999999999975 779999543211112234689999999997 378999999999
Q ss_pred cEEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCceE--EEEEcCCCccceEEEEeC
Q 019258 93 SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWA 166 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~~~~~ 166 (343)
+|++||+...+...... ...|...|.+++|+ +..+++++.|++|++||++.+... ...+..|.. .+.+++|+
T Consensus 82 ~v~iWd~~~~~~~~~~~-~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~-~v~~~~~~ 159 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHE-HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI-GCNAVSWA 159 (316)
T ss_dssp CEEEECCSSSCCCEEEE-ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS-CBCCCEEC
T ss_pred EEEEEECCCCcceEEEE-ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC-CcceEEEc
Confidence 99999998542111111 23699999999997 458999999999999999875322 233344544 78999998
Q ss_pred CC------------------CEEEEEeCCCcEEEEEccccCCCC---CeeEEecccCCCCCcccCeEEEEEcCCC---Ce
Q 019258 167 SP------------------TEFVTGGFGYGLQWWDLRRAGSGG---PVLQFKGNFGSQGKASGMIHSVDIHPSR---KH 222 (343)
Q Consensus 167 ~~------------------~~l~t~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~v~~~p~~---~~ 222 (343)
|. ..|++++.|++|++||++. .. ++..+.+|. .+|.+++|+|++ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~---~~~~~~~~~l~~h~-------~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE---DGQWKEEQKLEAHS-------DWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT---TSCEEEEECCBCCS-------SCEEEEECCCCSSCSCC
T ss_pred cccCCccccccccccCccccceEEEecCCCeEEEEEeCC---CCccceeeecccCC-------CceEEEEecCCCCCCCc
Confidence 83 5799999999999999976 32 333455444 789999999986 35
Q ss_pred EEEEEecCCcEEEEEccCCc---eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEE
Q 019258 223 TCLAGGSSGTVFAWDLRWQQ---QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVV 299 (343)
Q Consensus 223 ~~~sg~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~ 299 (343)
+|++|+.||+|++||++... .....+ ..|...|++++|+|++. .|++++.||+|++|
T Consensus 230 ~las~s~D~~v~iw~~~~~~~~~~~~~~~----------~~~~~~v~~v~~sp~g~----------~las~~~D~~v~lw 289 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDDASSNTWSPKLL----------HKFNDVVWHVSWSITAN----------ILAVSGGDNKVTLW 289 (316)
T ss_dssp EEEEEETTCEEEEEECSSTTCCCCBCCEE----------EECSSCEEEEEECTTTC----------CEEEEESSSCEEEE
T ss_pred eEEEEcCCCeEEEEEccCccccchhhhhh----------hcCCCcEEEEEEcCCCC----------EEEEEcCCCeEEEE
Confidence 78999999999999997631 111222 35788999999999987 79999999999999
Q ss_pred ecC
Q 019258 300 EQG 302 (343)
Q Consensus 300 ~~~ 302 (343)
+..
T Consensus 290 ~~~ 292 (316)
T 3bg1_A 290 KES 292 (316)
T ss_dssp EEC
T ss_pred EEC
Confidence 975
No 48
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.1e-32 Score=238.64 Aligned_cols=238 Identities=16% Similarity=0.157 Sum_probs=190.8
Q ss_pred CCCCCCeeEEEcc--CCCeEEEEcCCCcEEEEEccCce-e-eeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEE
Q 019258 68 WTPPTRISSLSTS--HQSLVAASTLSGSLHVLSSAMQV-L-LSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVS 141 (343)
Q Consensus 68 ~~~~~~v~~v~~~--~~~~l~~~s~dg~v~v~~~~~~~-~-~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd 141 (343)
..|.+.|++++|+ .+++|++|+.|++|++|++.... . -.......+|...|.++.|+ +.++++++.|++|++||
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 3689999999998 45799999999999999986321 1 11122234699999999998 88999999999999999
Q ss_pred CCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCC
Q 019258 142 VIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSR 220 (343)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~ 220 (343)
+.+++ ....+..|.. .|.+++|++ +..+++++.|++|++||++. ..+..+.+|. ..|.++++.|..
T Consensus 94 ~~~~~-~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h~-------~~v~~~~~~~~~ 160 (319)
T 3frx_A 94 VATGE-TYQRFVGHKS-DVMSVDIDKKASMIISGSRDKTIKVWTIKG----QCLATLLGHN-------DWVSQVRVVPNE 160 (319)
T ss_dssp TTTTE-EEEEEECCSS-CEEEEEECTTSCEEEEEETTSCEEEEETTS----CEEEEECCCS-------SCEEEEEECCC-
T ss_pred CCCCC-eeEEEccCCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeEEEEeccC-------CcEEEEEEccCC
Confidence 99985 5555566766 899999999 88999999999999999965 5666676665 789999999964
Q ss_pred C-----eEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCe
Q 019258 221 K-----HTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGI 295 (343)
Q Consensus 221 ~-----~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~ 295 (343)
. ..+++|+.|+.|++||+++.+....+ .+|...|.+++|+|++. +|++++.||+
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-----------~~h~~~v~~~~~sp~g~----------~l~s~~~dg~ 219 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADF-----------IGHNSNINTLTASPDGT----------LIASAGKDGE 219 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEE-----------CCCCSCEEEEEECTTSS----------EEEEEETTCE
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheee-----------cCCCCcEEEEEEcCCCC----------EEEEEeCCCe
Confidence 2 36789999999999999885544333 46999999999999987 7999999999
Q ss_pred EEEEecCCC-cccccccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 296 LAVVEQGEE-PFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 296 i~~~~~~~~-~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
|++|+.... ....+..+.+|.+++++| ++.++++++++ .+.+|.
T Consensus 220 i~iwd~~~~~~~~~~~~~~~v~~~~~sp-~~~~la~~~~~-~i~v~~ 264 (319)
T 3frx_A 220 IMLWNLAAKKAMYTLSAQDEVFSLAFSP-NRYWLAAATAT-GIKVFS 264 (319)
T ss_dssp EEEEETTTTEEEEEEECCSCEEEEEECS-SSSEEEEEETT-EEEEEE
T ss_pred EEEEECCCCcEEEEecCCCcEEEEEEcC-CCCEEEEEcCC-CcEEEE
Confidence 999997643 233334457899999999 56888887755 577764
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.9e-32 Score=248.55 Aligned_cols=278 Identities=12% Similarity=0.079 Sum_probs=212.0
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc-CCCCCCeeEEEcc-CCCeEEEEcCCCcEEE
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ-WTPPTRISSLSTS-HQSLVAASTLSGSLHV 96 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~-~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v 96 (343)
..+....|+| ++++|++|+.|+. +++|++... .+... ..|.+.|.+++|+ ++.+|++++.||.|++
T Consensus 98 ~~~~~~~~~~----~~~~l~~~~~dg~-----i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 98 DYTAVDTAKL----QMRRFILGTTEGD-----IKVLDSNFN---LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKI 165 (420)
T ss_dssp CEEEEEEECS----SSCEEEEEETTSC-----EEEECTTSC---EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CceEEEEEec----CCCEEEEEECCCC-----EEEEeCCCc---ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEE
Confidence 3344446677 8899999999975 779998643 22333 3788999999999 8889999999999999
Q ss_pred EEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCC---Cc--------------
Q 019258 97 LSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGN---GL-------------- 157 (343)
Q Consensus 97 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~---~~-------------- 157 (343)
|++...+.+... ..|.+.|.++.|+ +..+++++.||+|++||+++++ ....+..+ ..
T Consensus 166 wd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 166 WSVKDGSNPRTL---IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT-TIHTFNRKENPHDGVNSIALFVGTDRQ 241 (420)
T ss_dssp EETTTCCCCEEE---ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE-EEEEECBTTBTTCCEEEEEEEECCCSS
T ss_pred EeCCCCcCceEE---cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc-eeEEeecCCCCCCCccEEEEecCCcce
Confidence 999865544333 2699999999998 8899999999999999999885 44444432 11
Q ss_pred ------cceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC
Q 019258 158 ------VGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS 230 (343)
Q Consensus 158 ------~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d 230 (343)
..+.+++|+| +..+++++.|+.|++||++. ++.+..+.... . ..|.+++|+|++..++++|+.|
T Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~--~----~~v~~~~~~~~~~~~l~~g~~d 312 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS---KEQTIQLPSKF--T----CSCNSLTVDGNNANYIYAGYEN 312 (420)
T ss_dssp CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT---CCEEEEECCTT--S----SCEEEEEECSSCTTEEEEEETT
T ss_pred eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC---CceeEEccccc--C----CCceeEEEeCCCCCEEEEEeCC
Confidence 1344445567 67899999999999999998 66666654322 1 7799999999987678899999
Q ss_pred CcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--c---
Q 019258 231 GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--P--- 305 (343)
Q Consensus 231 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~--- 305 (343)
|.|++||++++..+..... ..|...|..+.+. ++. .|++++.||.|++|+.... +
T Consensus 313 g~i~vwd~~~~~~~~~~~~---------~~~~~~v~~~~~~-~~~----------~l~s~~~d~~v~iw~~~~~~~~~~~ 372 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFL---------INEGTPINNVYFA-AGA----------LFVSSGFDTSIKLDIISDPESERPA 372 (420)
T ss_dssp SEEEEEETTCTTSCSEEEE---------ESTTSCEEEEEEE-TTE----------EEEEETTTEEEEEEEECCTTCCSCE
T ss_pred CeEEEEEcCCCcCchhhhh---------ccCCCCceEEEeC-CCC----------EEEEecCCccEEEEeccCCCCCccc
Confidence 9999999998766555441 2367788888655 554 7999999999999996431 1
Q ss_pred ------ccccccccccceeeecCCCCC---eeEEccCCceEEEEeC
Q 019258 306 ------FELLAEPCAINSFDIDPQNPS---DVICSLEWESIAIVSR 342 (343)
Q Consensus 306 ------~~~~~~~~~i~s~~~~~~~~~---~l~~~~~~~~i~~~~~ 342 (343)
..+......|.++.++| ++. .+++.++++.+.+|+-
T Consensus 373 ~~~~~~~~~~~~~~~v~~~~~s~-~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 373 IEFETPTFLVSNDDAVSQFCYVS-DDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp ECTTSCEEECCSSCCCCEEEEEC-CSSSSCEEEEEETTTEEEEEES
T ss_pred eeccCccEEccCCcceEEEEEcc-CCCCcceEEEEcCCceEEEEec
Confidence 12223346899999999 456 6788888999999874
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8e-33 Score=244.40 Aligned_cols=243 Identities=14% Similarity=0.100 Sum_probs=186.0
Q ss_pred CCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEEC
Q 019258 68 WTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSV 142 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~ 142 (343)
..|.+.|++++|+ ++++|++|+.|++|+|||+.......+. ...+|.++|.+++|+ ++.|++++.|++|++||+
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~-~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIA-DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEE-EEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEE-EEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 3688999999999 8899999999999999999854322222 223699999999995 689999999999999999
Q ss_pred CCCc-eEEEEEcCCCccceEEEEeCC---CCEEEEEeCCCcEEEEEccccCCCCCee---EEecccCCCCCcccCeEEEE
Q 019258 143 IGGG-EFKRVYDGNGLVGFNCVKWAS---PTEFVTGGFGYGLQWWDLRRAGSGGPVL---QFKGNFGSQGKASGMIHSVD 215 (343)
Q Consensus 143 ~~~~-~~~~~~~~~~~~~v~~~~~~~---~~~l~t~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~v~ 215 (343)
+++. .....+..|.. .|.+++|+| +..|++++.|++|++||++. ..... .+..|. ..+.+++
T Consensus 89 ~~~~~~~~~~~~~h~~-~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~---~~~~~~~~~~~~h~-------~~v~~~~ 157 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDS-SVNSVCWAPHDYGLILACGSSDGAISLLTYTG---EGQWEVKKINNAHT-------IGCNAVS 157 (316)
T ss_dssp SSSCCCEEEEECCCSS-CCCEEEECCTTTCSCEEEECSSSCEEEEEECS---SSCEEECCBTTSSS-------SCBCCCE
T ss_pred CCCcceEEEEccCCCC-ceEEEEECCCCCCcEEEEEcCCCCEEEEecCC---CCCcceeeeecccc-------CCcceEE
Confidence 8753 23344555665 799999998 45799999999999999987 32221 122222 6799999
Q ss_pred EcCCC----------------CeEEEEEecCCcEEEEEccCCc--eeeeeecCCCCcccccCCccccEEEEEEeecC---
Q 019258 216 IHPSR----------------KHTCLAGGSSGTVFAWDLRWQQ--QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHT--- 274 (343)
Q Consensus 216 ~~p~~----------------~~~~~sg~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--- 274 (343)
|+|+. ..+|++|+.|++|++||++... .+...+ .+|...|.+++|+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l----------~~h~~~V~~v~~sp~~~~~ 227 (316)
T 3bg1_A 158 WAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL----------EAHSDWVRDVAWAPSIGLP 227 (316)
T ss_dssp ECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC----------BCCSSCEEEEECCCCSSCS
T ss_pred EccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec----------ccCCCceEEEEecCCCCCC
Confidence 99973 1467899999999999997542 233333 6799999999999986
Q ss_pred CCCcCCCCCccceEEEecCCeEEEEecCCC-----ccccc-ccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 275 KSSNISSSRVLPAMFCSEDGILAVVEQGEE-----PFELL-AEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 275 ~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-----~~~~~-~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.. .|+++|.||+|++|+.... ...++ ....+|.+++|+| ++.+|+++++|+.|++|+.
T Consensus 228 ~~---------~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 228 TS---------TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSI-TANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp CC---------EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECT-TTCCEEEEESSSCEEEEEE
T ss_pred Cc---------eEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEE
Confidence 23 7999999999999986531 11222 2356899999999 6799999999999999973
No 51
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-32 Score=237.68 Aligned_cols=274 Identities=12% Similarity=0.049 Sum_probs=214.8
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++| | ++++|++|+.|+. |++|++...... .....|.+.|.+++|+ ++.+|++++.||.|
T Consensus 16 ~h~~~v~~~~~-~----~~~~l~s~~~dg~-----v~vw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 16 GHDQDVRDVVA-V----DDSKVASVSRDGT-----VRLWSKDDQWLG--TVVYTGQGFLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp CCSSCEEEEEE-E----ETTEEEEEETTSE-----EEEEEESSSEEE--EEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred CCCCCcEEEEe-c----CCCEEEEEEcCCc-----EEEEECCCCEEE--EEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence 58889999999 8 7889999999975 779999543221 2234578899999999 88999999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--CCEEE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS--PTEFV 172 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~ 172 (343)
++|++..............|...|.++.|+++.+++++.||.|++|| .+ .....+..+.. .+.++.|.+ ++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~-~~~~~~~~~~~-~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EG-SLVYNLQAHNA-SVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TT-EEEEEEECCSS-CEEEEEEEETTTTEEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CC-cEEEecccCCC-ceeEEEEccCCCCEEE
Confidence 99999743222222222469999999999999999999999999999 44 34444555555 799999987 88999
Q ss_pred EEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCC
Q 019258 173 TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGT 252 (343)
Q Consensus 173 t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~ 252 (343)
+++.|+.|++||.. .....+.... . ..+.+++|+|++. +++|+.||.|++||+++.+.... .
T Consensus 160 ~~~~d~~i~i~d~~-----~~~~~~~~~~--~----~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~~~~~-~---- 221 (313)
T 3odt_A 160 TASADKTIKLWQND-----KVIKTFSGIH--N----DVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGDVLRT-Y---- 221 (313)
T ss_dssp EEETTSCEEEEETT-----EEEEEECSSC--S----SCEEEEEEEETTE--EEEEETTSEEEEEETTTCCEEEE-E----
T ss_pred EEECCCCEEEEecC-----ceEEEEeccC--c----ccEEEEEEcCCCe--EEEccCCCeEEEEECCchhhhhh-h----
Confidence 99999999999953 4445555422 1 7799999999875 67999999999999998654433 3
Q ss_pred CcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-c-ccccccccccceeeecCCCCCeeEE
Q 019258 253 GEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-P-FELLAEPCAINSFDIDPQNPSDVIC 330 (343)
Q Consensus 253 ~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~-~~~~~~~~~i~s~~~~~~~~~~l~~ 330 (343)
..|...|.+++|+|++ .+++++.||.|++|+.... . ..+.....+|.++.++| ++. +++
T Consensus 222 ------~~~~~~i~~~~~~~~~-----------~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~ 282 (313)
T 3odt_A 222 ------EGHESFVYCIKLLPNG-----------DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMS-NGD-IIV 282 (313)
T ss_dssp ------ECCSSCEEEEEECTTS-----------CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECT-TSC-EEE
T ss_pred ------hcCCceEEEEEEecCC-----------CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEcc-CCC-EEE
Confidence 4688999999999986 3899999999999997533 2 23333356899999999 445 667
Q ss_pred ccCCceEEEEeC
Q 019258 331 SLEWESIAIVSR 342 (343)
Q Consensus 331 ~~~~~~i~~~~~ 342 (343)
++.++.|++|+.
T Consensus 283 ~~~dg~i~iw~~ 294 (313)
T 3odt_A 283 GSSDNLVRIFSQ 294 (313)
T ss_dssp EETTSCEEEEES
T ss_pred EeCCCcEEEEeC
Confidence 888999999974
No 52
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-32 Score=241.35 Aligned_cols=248 Identities=12% Similarity=0.050 Sum_probs=181.5
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCC----CCCCCc-cCCCCCCeeEEEcc-CCCeEEEEcC
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPA----SLTPHS-QWTPPTRISSLSTS-HQSLVAASTL 90 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~----~~~~~~-~~~~~~~v~~v~~~-~~~~l~~~s~ 90 (343)
|...|.+|+|+| ++++|++|+.|+. +++|++.... ...++. ...|.+.|.+++|+ ++.+|++++.
T Consensus 57 h~~~v~~v~~sp----~~~~las~s~D~~-----v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~ 127 (330)
T 2hes_X 57 HKKAIRSVAWRP----HTSLLAAGSFDST-----VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR 127 (330)
T ss_dssp CCSCEEEEEECT----TSSEEEEEETTSC-----EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET
T ss_pred ccCCEEEEEECC----CCCEEEEEeCCCc-----EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence 888999999999 8899999999975 7799984321 112222 24688999999999 8899999999
Q ss_pred CCcEEEEEccC-ceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCc-eEEEEEcCCCccceEEEEeC
Q 019258 91 SGSLHVLSSAM-QVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGG-EFKRVYDGNGLVGFNCVKWA 166 (343)
Q Consensus 91 dg~v~v~~~~~-~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~ 166 (343)
|++|++|++.. ............|...|.++.|+ +..|++++.|++|++||..++. .+...+..|.. .|.+++|+
T Consensus 128 D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~-~v~~~~~~ 206 (330)
T 2hes_X 128 DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG-TVWSSDFD 206 (330)
T ss_dssp TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEEC
T ss_pred CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC-cEEEEEec
Confidence 99999999952 22222222234699999999998 8899999999999999987652 34556666766 89999999
Q ss_pred C---CCEEEEEeCCCcEEEEEccccCCC-----CCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEc
Q 019258 167 S---PTEFVTGGFGYGLQWWDLRRAGSG-----GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238 (343)
Q Consensus 167 ~---~~~l~t~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~ 238 (343)
| ...+++++.|++|++||++..... .....+.. .+...|.+++|+|.+ ++++|+.||+|++||.
T Consensus 207 ~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 207 KTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD------VHKRQVYNVAWGFNG--LIASVGADGVLAVYEE 278 (330)
T ss_dssp CSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCS------CCSSCEEEEEECTTS--CEEEEETTSCEEEEEE
T ss_pred CCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccc------ccccceEEEEEcCCC--EEEEEeCCCEEEEEEc
Confidence 9 347999999999999999861110 11111221 112789999999764 5789999999999999
Q ss_pred cCCce-ee-eeecCCCCcccccCCccc-cEEEEEEeec--CCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 239 RWQQQ-SI-VLSGVGTGEAVTHSLSES-EVWEVQYDCH--TKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 239 ~~~~~-~~-~~~~~~~~~~~~~~~h~~-~v~~v~~~p~--~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
+.++. .. ... ..|.. .|.+++|+|. +. .|+++|.||+|++|+..
T Consensus 279 ~~~~~~~~~~~~----------~~h~~~~v~~v~~~~~~~~~----------~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 279 VDGEWKVFAKRA----------LCHGVYEINVVKWLELNGKT----------ILATGGDDGIVNFWSLE 327 (330)
T ss_dssp ETTEEEEEEEES----------CTTTTSCEEEEEEC-----C----------CEEEEETTSEEEEEEC-
T ss_pred CCCceEEEeccc----------cccccceEEEEEEecCCCce----------EEEEecCCCcEEEEEec
Confidence 76532 22 222 45776 8999999994 44 79999999999999864
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7e-32 Score=238.87 Aligned_cols=280 Identities=14% Similarity=0.092 Sum_probs=219.9
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.+...|.+++|+| ++++++++..++. +..|..+. ....+....|.+.|.+++|+ ++.+|++++ ||.|
T Consensus 7 ~~~~~v~~~~~s~----dg~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i 74 (337)
T 1gxr_A 7 MGSKPAYSFHVTA----DGQMQPVPFPPDA-----LIGPGIPR--HARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCV 74 (337)
T ss_dssp EEEEECCEEEECS----SSCEEECCCCTTS-----SSSTTCCS--EEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEE
T ss_pred ccCCceeEEEECC----CCCEEEeecCCCc-----EeccccCC--ccccceeccCCCceEEEEEecCCcEEEEcC-CCeE
Confidence 3566899999999 8999987765543 33554432 22334556899999999999 788888888 9999
Q ss_pred EEEEccCceeeeeec--cCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCce-EEEEEcCCCccceEEEEeCC-C
Q 019258 95 HVLSSAMQVLLSVDE--NSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGE-FKRVYDGNGLVGFNCVKWAS-P 168 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~--~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~-~~~~~~~~~~~~v~~~~~~~-~ 168 (343)
++|++.......... ....|...|.++.|+ ++.+++++.||.|++||+++++. ....+..+.. .+.+++|+| +
T Consensus 75 ~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~-~i~~~~~~~~~ 153 (337)
T 1gxr_A 75 KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP-ACYALAISPDS 153 (337)
T ss_dssp EEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSS-CEEEEEECTTS
T ss_pred EEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCC-ceEEEEECCCC
Confidence 999998443221111 112588899999999 88999999999999999988642 3334444544 799999999 7
Q ss_pred CEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeee
Q 019258 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248 (343)
Q Consensus 169 ~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~ 248 (343)
+.+++++.|+.|++||++. ++++..+..+. ..+.+++|+|++. .+++++.||.|++||+++.+....+.
T Consensus 154 ~~l~~~~~dg~v~~~d~~~---~~~~~~~~~~~-------~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~ 222 (337)
T 1gxr_A 154 KVCFSCCSDGNIAVWDLHN---QTLVRQFQGHT-------DGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQLQQHD 222 (337)
T ss_dssp SEEEEEETTSCEEEEETTT---TEEEEEECCCS-------SCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeCCC---Cceeeeeeccc-------CceEEEEECCCCC-EEEEEecCCcEEEEECCCCceEeeec
Confidence 8999999999999999988 66677776554 7799999999875 56789999999999999865444433
Q ss_pred cCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-cccccccccccceeeecCCCCCe
Q 019258 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFELLAEPCAINSFDIDPQNPSD 327 (343)
Q Consensus 249 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~~~~~~~i~s~~~~~~~~~~ 327 (343)
|...+.+++|+|++. .+++++.||.|++|+.... ...+..+..+|.++.++| ++++
T Consensus 223 ------------~~~~v~~~~~s~~~~----------~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 279 (337)
T 1gxr_A 223 ------------FTSQIFSLGYCPTGE----------WLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY-CGKW 279 (337)
T ss_dssp ------------CSSCEEEEEECTTSS----------EEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECT-TSSE
T ss_pred ------------CCCceEEEEECCCCC----------EEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECC-CCCE
Confidence 678899999999987 7999999999999998644 334444567899999999 5799
Q ss_pred eEEccCCceEEEEeC
Q 019258 328 VICSLEWESIAIVSR 342 (343)
Q Consensus 328 l~~~~~~~~i~~~~~ 342 (343)
|++++.++.|++|+-
T Consensus 280 l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 280 FVSTGKDNLLNAWRT 294 (337)
T ss_dssp EEEEETTSEEEEEET
T ss_pred EEEecCCCcEEEEEC
Confidence 999999999999974
No 54
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.4e-31 Score=253.18 Aligned_cols=273 Identities=14% Similarity=0.179 Sum_probs=222.1
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| +++.+++++.|+. +++|+.+... ......|.+.|.+++|+ ++..|++++.||.|
T Consensus 260 ~~~~~v~~v~~~~----d~~~l~~~~~d~~-----i~~w~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i 327 (577)
T 2ymu_A 260 GHSSSVNGVAFRP----DGQTIASASDDKT-----VKLWNRNGQL---LQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 327 (577)
T ss_dssp CCSSCEEEEEECT----TSSEEEEEETTSC-----EEEEETTSCE---EEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cCCCCEEEEEEcC----CCCEEEEEeCCCE-----EEEEeCCCcE---EEEEecCCCCeEEEEECCCCCEEEEEeCCCeE
Confidence 4678899999999 8899999999865 7799975421 12234688899999999 88999999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF 171 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 171 (343)
++|+....+ +... ..|...|.+++++ ++.+++++.||.|++||.... ....+..|.. .|.+++|+| +..|
T Consensus 328 ~~w~~~~~~-~~~~---~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~--~~~~~~~~~~-~v~~~~~s~dg~~l 400 (577)
T 2ymu_A 328 KLWNRNGQH-LQTL---TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQTLTGHSS-SVRGVAFSPDGQTI 400 (577)
T ss_dssp EEEETTSCE-EEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCC--EEEEEECCSS-CEEEEEECTTSSCE
T ss_pred EEEeCCCCe-eEEE---eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCC--EEEEecCCCC-CeEEEEECCCCCEE
Confidence 999987443 2222 3588999999998 889999999999999996543 4444455655 799999999 8889
Q ss_pred EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCC
Q 019258 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVG 251 (343)
Q Consensus 172 ~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~ 251 (343)
++++.|+.|++||. . ++.+..+..+. ..|.+++|+|++. ++++++.|+.|++||... +.. ...
T Consensus 401 ~~~~~d~~v~~~~~-~---~~~~~~~~~~~-------~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~-~~~-~~~--- 463 (577)
T 2ymu_A 401 ASASDDKTVKLWNR-N---GQLLQTLTGHS-------SSVWGVAFSPDDQ-TIASASDDKTVKLWNRNG-QLL-QTL--- 463 (577)
T ss_dssp EEEETTSEEEEECT-T---CCEEEEEECCS-------SCEEEEEECTTSS-EEEEEETTSEEEEEETTS-CEE-EEE---
T ss_pred EEEeCCCEEEEEeC-C---CCEEEEecCCC-------CCeEEEEECCCCC-EEEEEcCCCEEEEEECCC-CEE-EEE---
Confidence 99999999999995 3 46667777665 7899999999876 568999999999999743 333 333
Q ss_pred CCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-ccccccccccceeeecCCCCCeeEE
Q 019258 252 TGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLAEPCAINSFDIDPQNPSDVIC 330 (343)
Q Consensus 252 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~~~~~i~s~~~~~~~~~~l~~ 330 (343)
..|...|.+++|+|++. +|++++.|+.|++|+...+. ..+..+..+|++++++| ++++|++
T Consensus 464 -------~~~~~~v~~~~~spd~~----------~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s 525 (577)
T 2ymu_A 464 -------TGHSSSVRGVAFSPDGQ----------TIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSP-DGQTIAS 525 (577)
T ss_dssp -------ECCSSCEEEEEECTTSC----------EEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECT-TSSCEEE
T ss_pred -------cCCCCCEEEEEEcCCCC----------EEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcC-CCCEEEE
Confidence 46899999999999987 79999999999999976443 34444567899999999 6799999
Q ss_pred ccCCceEEEEeC
Q 019258 331 SLEWESIAIVSR 342 (343)
Q Consensus 331 ~~~~~~i~~~~~ 342 (343)
+++|+.|++|+.
T Consensus 526 ~~~dg~v~lwd~ 537 (577)
T 2ymu_A 526 ASDDKTVKLWNR 537 (577)
T ss_dssp EETTSEEEEECT
T ss_pred EECcCEEEEEeC
Confidence 999999999975
No 55
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.6e-32 Score=249.89 Aligned_cols=289 Identities=11% Similarity=0.071 Sum_probs=207.8
Q ss_pred CCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCC--------CCCC-ccCCCC------------CC
Q 019258 15 FPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPAS--------LTPH-SQWTPP------------TR 73 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~--------~~~~-~~~~~~------------~~ 73 (343)
..+.+.|.+|+|+| ++++||+|+.|+. |++|++..... .++. ....|. +.
T Consensus 25 ~~~~~~V~~v~~s~----~g~~la~g~~dg~-----v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 95 (447)
T 3dw8_B 25 VAEADIISTVEFNH----SGELLATGDKGGR-----VVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEK 95 (447)
T ss_dssp CCGGGSEEEEEECS----SSSEEEEEETTSE-----EEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCC
T ss_pred ccccCcEEEEEECC----CCCEEEEEcCCCe-----EEEEEecCCCCCCcccccceeEecccccccccccccccccccCc
Confidence 45678999999999 8999999999975 77999864321 1111 223465 78
Q ss_pred eeEEEcc-CC--CeEEEEcCCCcEEEEEccCceeee-------------------------------------eeccCCc
Q 019258 74 ISSLSTS-HQ--SLVAASTLSGSLHVLSSAMQVLLS-------------------------------------VDENSGF 113 (343)
Q Consensus 74 v~~v~~~-~~--~~l~~~s~dg~v~v~~~~~~~~~~-------------------------------------~~~~~~~ 113 (343)
|++++|+ ++ ..|++++.||.|++|++....... .......
T Consensus 96 V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
T 3dw8_B 96 INKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA 175 (447)
T ss_dssp CCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC
T ss_pred eEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC
Confidence 9999999 54 689999999999999987432210 0011346
Q ss_pred cccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEE-------EcCCCccceEEEEeCC-C-CEEEEEeCCCcEEE
Q 019258 114 HVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRV-------YDGNGLVGFNCVKWAS-P-TEFVTGGFGYGLQW 182 (343)
Q Consensus 114 h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~-------~~~~~~~~v~~~~~~~-~-~~l~t~~~d~~i~i 182 (343)
|...|.+++|+ ++.|+++ .|++|++||+++....... +..|.. .|.+++|+| + ..|++++.|+.|++
T Consensus 176 h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE-VITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC-CEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc-ceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 99999999998 7888888 8999999999854334443 234544 799999999 5 89999999999999
Q ss_pred EEccccCCCCC----eeEEecccCCCC-----CcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCC
Q 019258 183 WDLRRAGSGGP----VLQFKGNFGSQG-----KASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTG 253 (343)
Q Consensus 183 wd~~~~~~~~~----~~~~~~~~~~~~-----~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~ 253 (343)
||++. ++. +..+..+..... .+...|.+++|+|++.. +++++. |.|++||++....+....
T Consensus 254 wd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~-~~v~iwd~~~~~~~~~~~----- 323 (447)
T 3dw8_B 254 CDMRA---SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY-MMTRDY-LSVKVWDLNMENRPVETY----- 323 (447)
T ss_dssp EETTT---CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE-EEEEES-SEEEEEETTCCSSCSCCE-----
T ss_pred EECcC---CccccceeeEeccCCCccccccccccCceEEEEEECCCCCE-EEEeeC-CeEEEEeCCCCcccccee-----
Confidence 99998 454 555665431000 00027999999998865 567888 999999998744444433
Q ss_pred cccccCCcccc---------------EEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc-ccc--------
Q 019258 254 EAVTHSLSESE---------------VWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF-ELL-------- 309 (343)
Q Consensus 254 ~~~~~~~h~~~---------------v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~-~~~-------- 309 (343)
..|... +..++|+|++. +|++++.||.|++|+...... .+.
T Consensus 324 -----~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~----------~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~ 388 (447)
T 3dw8_B 324 -----QVHEYLRSKLCSLYENDCIFDKFECCWNGSDS----------VVMTGSYNNFFRMFDRNTKRDITLEASRENNKP 388 (447)
T ss_dssp -----ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS----------EEEEECSTTEEEEEETTTCCEEEEECCSTTCCT
T ss_pred -----eccccccccccccccccccccceEEEECCCCC----------EEEEeccCCEEEEEEcCCCcceeeeeccccccc
Confidence 334321 34599999987 799999999999999753321 111
Q ss_pred -------------------------ccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 310 -------------------------AEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 310 -------------------------~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
.....|..++|+| ++.+|++++.+ .+++|.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~la~~~~~-~~~~~~ 443 (447)
T 3dw8_B 389 RTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHP-KENIIAVATTN-NLYIFQ 443 (447)
T ss_dssp TCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECS-SSSEEEEECSS-CEEEEE
T ss_pred ccccCCccccccCCcccccccccccccCCceeEEEECC-CCCEEEEEecc-eeeeec
Confidence 1124688899999 56888888766 588876
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-32 Score=247.74 Aligned_cols=275 Identities=10% Similarity=0.078 Sum_probs=220.0
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEE
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLH 95 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~ 95 (343)
|...|.+++|+| ++++|++|+.|+. |++|+.... .......|.+.|.+++|+ ++.+|++++.||.|+
T Consensus 107 ~~~~v~~~~~s~----~~~~l~~~~~dg~-----i~i~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 107 TTNQVTCLAWSH----DGNSIVTGVENGE-----LRLWNKTGA---LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTI 174 (425)
T ss_dssp -CBCEEEEEECT----TSSEEEEEETTSC-----EEEEETTSC---EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred CCCceEEEEEcC----CCCEEEEEeCCCe-----EEEEeCCCC---eeeeccCCCccEEEEEECCCCCEEEEEecCCeEE
Confidence 466899999999 8999999999865 779994321 112233588899999999 888999999999999
Q ss_pred EEEccCceeeeeeccCCccccC---------------eEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccc
Q 019258 96 VLSSAMQVLLSVDENSGFHVGP---------------ISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVG 159 (343)
Q Consensus 96 v~~~~~~~~~~~~~~~~~h~~~---------------v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~ 159 (343)
+|++...+.+.... .|... +.++.|+ +..+++++.||.|++||+.+++ ....+..+.. .
T Consensus 175 iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~-~~~~~~~~~~-~ 249 (425)
T 1r5m_A 175 LWNVISGTVMQHFE---LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKT-PTGKLIGHHG-P 249 (425)
T ss_dssp EEETTTTEEEEEEC---CC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSS-CSEEECCCSS-C
T ss_pred EEECCCCcEEEEee---ccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCc-eeeeeccCCC-c
Confidence 99998665554332 23333 8888888 8889999999999999999875 4444455555 7
Q ss_pred eEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEc
Q 019258 160 FNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDL 238 (343)
Q Consensus 160 v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~ 238 (343)
+.+++|+| +..+++++.|+.|++||++. .+++..+..+. ..+.+++|+|++ ++++++.||.|++||+
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~-------~~i~~~~~~~~~--~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGN---GNSQNCFYGHS-------QSIVSASWVGDD--KVISCSMDGSVRLWSL 317 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSS---BSCSEEECCCS-------SCEEEEEEETTT--EEEEEETTSEEEEEET
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCC---CccceEecCCC-------ccEEEEEECCCC--EEEEEeCCCcEEEEEC
Confidence 99999999 78999999999999999988 67777776554 789999999987 6789999999999999
Q ss_pred cCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-------------
Q 019258 239 RWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP------------- 305 (343)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~------------- 305 (343)
++...... . ..|...|.+++|+|++. .|++++.||.|++|+.....
T Consensus 318 ~~~~~~~~-~----------~~~~~~i~~~~~s~~~~----------~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 376 (425)
T 1r5m_A 318 KQNTLLAL-S----------IVDGVPIFAGRISQDGQ----------KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGI 376 (425)
T ss_dssp TTTEEEEE-E----------ECTTCCEEEEEECTTSS----------EEEEEETTSCEEEEECHHHHC------------
T ss_pred CCCcEeEe-c----------ccCCccEEEEEEcCCCC----------EEEEEECCCeEEEEECCCCccceeeeecccccc
Confidence 88554433 3 45788999999999987 79999999999999974221
Q ss_pred ---------ccccccc-c-ccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 306 ---------FELLAEP-C-AINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 306 ---------~~~~~~~-~-~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
..+..+. . +|.++.|+| ++.+|+++++++.|++|+-
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 377 LNPLPIPLYASYQSSQDNDYIFDLSWNC-AGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp --CEECCEEEEECCTTCCCCEEEEEECT-TSSEEEEEESSSCCEEEEC
T ss_pred cCcccchhhhhhcCcccCCceEEEEccC-CCceEEEEecCceEEEEee
Confidence 2222222 3 899999999 5689999999999999974
No 57
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.3e-31 Score=232.20 Aligned_cols=275 Identities=17% Similarity=0.183 Sum_probs=215.4
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEE
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLS 98 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~ 98 (343)
..+.|+|+| ++ +|++| .|++ |++||+........+....|...|++++|+ ++++|++|+.||.|++|+
T Consensus 27 y~~~l~WS~----~~-~lAvg-~D~t-----V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~ 95 (318)
T 4ggc_A 27 YLNLVDWSS----GN-VLAVA-LDNS-----VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWD 95 (318)
T ss_dssp TCBCEEECT----TS-EEEEE-ETTE-----EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cceEEEECC----CC-EEEEE-eCCE-----EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEee
Confidence 468899999 43 66665 5754 779999654333333334677889999999 889999999999999999
Q ss_pred ccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCC
Q 019258 99 SAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFG 177 (343)
Q Consensus 99 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d 177 (343)
+...+.+.... .|...+.++.+.+..+++++.++.+++|+.............|.. .+..+.+.+ +..+++++.|
T Consensus 96 ~~~~~~~~~~~---~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d 171 (318)
T 4ggc_A 96 VQQQKRLRNMT---SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGND 171 (318)
T ss_dssp TTTTEEEEEEE---CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETT
T ss_pred cCCceeEEEec---CccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccC-ceEEEEEcCCCCEEEEEecC
Confidence 99776554443 688899998888999999999999999999886556666666665 799999999 8899999999
Q ss_pred CcEEEEEccccCCCCCe----eEEecccCCCCCcccCeEEEEEcCCCCeEE--EEEecCCcEEEEEccCCceeeeeecCC
Q 019258 178 YGLQWWDLRRAGSGGPV----LQFKGNFGSQGKASGMIHSVDIHPSRKHTC--LAGGSSGTVFAWDLRWQQQSIVLSGVG 251 (343)
Q Consensus 178 ~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~--~sg~~dg~v~iwd~~~~~~~~~~~~~~ 251 (343)
+.|++||++. ++.. .....+. +.|.+++++|.+..++ ++|+.+++|++||.+.........
T Consensus 172 ~~i~iwd~~~---~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--- 238 (318)
T 4ggc_A 172 NLVNVWPSAP---GEGGWVPLQTFTQHQ-------GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--- 238 (318)
T ss_dssp SCEEEEESSC---BTTBSCCSEEECCCC-------SCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE---
T ss_pred cceeEEECCC---CcccccceeeecccC-------CceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc---
Confidence 9999999987 3322 1222222 7799999999887665 456789999999998865544433
Q ss_pred CCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEE--ecCCeEEEEecCCC--cccccccccccceeeecCCCCCe
Q 019258 252 TGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFC--SEDGILAVVEQGEE--PFELLAEPCAINSFDIDPQNPSD 327 (343)
Q Consensus 252 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~--s~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~~~~ 327 (343)
+...+..+.|+|.+. .++++ +.||.|++|+.... ..++..+..+|++++|+| ++.+
T Consensus 239 ---------~~~~v~~~~~~~~~~----------~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp-dg~~ 298 (318)
T 4ggc_A 239 ---------AHSQVCSILWSPHYK----------ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP-DGAT 298 (318)
T ss_dssp ---------CSSCEEEEEEETTTT----------EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSC
T ss_pred ---------ceeeeeeeeeccccc----------ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCE
Confidence 677899999999887 45544 48999999997532 344445568899999999 6799
Q ss_pred eEEccCCceEEEEeC
Q 019258 328 VICSLEWESIAIVSR 342 (343)
Q Consensus 328 l~~~~~~~~i~~~~~ 342 (343)
|++|++|+.|++|+-
T Consensus 299 l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 299 VASAAADETLRLWRC 313 (318)
T ss_dssp EEEEETTTEEEEECC
T ss_pred EEEEecCCeEEEEEC
Confidence 999999999999974
No 58
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.2e-32 Score=248.34 Aligned_cols=302 Identities=16% Similarity=0.183 Sum_probs=221.0
Q ss_pred ccCCcccceeeEEecCCCC--CC----CCeEEEEeecCCCCCCceeeeeC--CCC-----------------------CC
Q 019258 13 HRFPQSKYIDAVRWLPPLS--PL----SKLAVLAIYDTDADSPSLETHSI--SLP-----------------------AS 61 (343)
Q Consensus 13 ~~~~~~~~i~~v~w~p~~~--~~----~~~l~t~s~D~~~~~~~l~~w~~--~~~-----------------------~~ 61 (343)
+.+...-+..++.|.|... .+ ..+++.|++... ..-.|.+.++ +.. ..
T Consensus 40 ~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~-~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~ 118 (430)
T 2xyi_A 40 MTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD-EQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGK 118 (430)
T ss_dssp EEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSS-SCEEEEEEEEEEC--------------------------C
T ss_pred hhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCC-CCCEEEEEEEECCCCccccccccccccccccccccCCCCc
Confidence 3333444578999999521 11 156888887543 2223445543 110 01
Q ss_pred CCCCccCCCCCCeeEEEcc-C-CCeEEEEcCCCcEEEEEccCc-------eeeeeeccCCccccCeEEEEec--CC-EEE
Q 019258 62 LTPHSQWTPPTRISSLSTS-H-QSLVAASTLSGSLHVLSSAMQ-------VLLSVDENSGFHVGPISGVDLT--GS-ECV 129 (343)
Q Consensus 62 ~~~~~~~~~~~~v~~v~~~-~-~~~l~~~s~dg~v~v~~~~~~-------~~~~~~~~~~~h~~~v~~~~~~--~~-~~~ 129 (343)
.+....+.|.+.|++++|+ + +.+|++++.+|.|++|++... ...........|...|++++|+ +. .|+
T Consensus 119 ~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 119 IEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred eEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 1224456789999999999 3 578999999999999999741 0011112223688999999998 55 899
Q ss_pred EEeCCCcEEEEECCCCce---E---EEEEcCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEeccc
Q 019258 130 SVGEDGRVNLVSVIGGGE---F---KRVYDGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNF 201 (343)
Q Consensus 130 s~s~dg~v~~wd~~~~~~---~---~~~~~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 201 (343)
+++.||+|++||+..+.. . ...+..|.. .|.+++|+| ...|++++.|+.|++||++......++..+..+.
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTA-VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEECSEEECCCSS-CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred EEeCCCeEEEEeCCCCCCCCceeccceeecCCCC-CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 999999999999987321 1 234445555 799999998 6788899999999999999811125666666554
Q ss_pred CCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCC
Q 019258 202 GSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISS 281 (343)
Q Consensus 202 ~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~ 281 (343)
..|++++|+|++.+++++|+.||.|++||++....+.... ..|...|.+++|+|++..
T Consensus 278 -------~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~----------~~h~~~v~~i~~sp~~~~----- 335 (430)
T 2xyi_A 278 -------AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF----------ESHKDEIFQVQWSPHNET----- 335 (430)
T ss_dssp -------SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE----------ECCSSCEEEEEECSSCTT-----
T ss_pred -------CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe----------ecCCCCEEEEEECCCCCC-----
Confidence 7799999999998889999999999999999866666665 578999999999999875
Q ss_pred CCccceEEEecCCeEEEEecCCC---------------ccccc-ccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 282 SRVLPAMFCSEDGILAVVEQGEE---------------PFELL-AEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 282 ~~~~~l~s~s~dg~i~~~~~~~~---------------~~~~~-~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.+++++.||.|++|+.... ..... .+...|+++.|+|+....++++++++.|++|+.
T Consensus 336 ----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 336 ----ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp ----EEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred ----EEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 7999999999999997541 11111 224579999999954238999999999999974
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=243.92 Aligned_cols=281 Identities=16% Similarity=0.221 Sum_probs=218.5
Q ss_pred ccCCcccceeeEEecCCCCCCCC-eEEEEeecCCCCCCceeeeeC----CCCCC------CCCC-ccC-------CCCCC
Q 019258 13 HRFPQSKYIDAVRWLPPLSPLSK-LAVLAIYDTDADSPSLETHSI----SLPAS------LTPH-SQW-------TPPTR 73 (343)
Q Consensus 13 ~~~~~~~~i~~v~w~p~~~~~~~-~l~t~s~D~~~~~~~l~~w~~----~~~~~------~~~~-~~~-------~~~~~ 73 (343)
....|...|.+++|+| +++ +|++|+.|+. +++|++ ..... ...+ ..+ .|.+.
T Consensus 40 ~~~~~~~~v~~~~~s~----~~~~~l~~~~~dg~-----i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNP----LDESILAYGEKNSV-----ARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQ 110 (425)
T ss_dssp EEEEECSCCSEEEECS----SCTTEEEEEETBTE-----EEEEEEEEC------CEEEEEEEEEECCCCCC------CBC
T ss_pred eeeeccCceEEEEECC----CCCcEEEEecCCce-----EEEEEEecccCCccccccccccccccccccccccccCCCCc
Confidence 3344568999999999 777 9999999865 779999 54331 1000 001 14669
Q ss_pred eeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEE
Q 019258 74 ISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKR 150 (343)
Q Consensus 74 v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~ 150 (343)
|.+++|+ ++.+|++++.||.|++|+.. .+.+... ..|..+|.++.|+ +..+++++.||.|++||+.+++ ...
T Consensus 111 v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~ 185 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVENGELRLWNKT-GALLNVL---NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT-VMQ 185 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEE---CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE-EEE
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCeeeec---cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc-EEE
Confidence 9999999 88999999999999999944 3333222 3588999999998 8899999999999999999885 444
Q ss_pred EEcCCCccc---------------eEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEE
Q 019258 151 VYDGNGLVG---------------FNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVD 215 (343)
Q Consensus 151 ~~~~~~~~~---------------v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 215 (343)
.+..+.. . +.++.|++...+++++.|+.|++||++. .+++..+..+. ..|.+++
T Consensus 186 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~---~~~~~~~~~~~-------~~i~~~~ 254 (425)
T 1r5m_A 186 HFELKET-GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITE---KTPTGKLIGHH-------GPISVLE 254 (425)
T ss_dssp EECCC----------------CCCBSCCEEEETTEEEEECGGGCEEEEETTC---SSCSEEECCCS-------SCEEEEE
T ss_pred Eeecccc-CccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCC---CceeeeeccCC-------CceEEEE
Confidence 4444443 3 8889999988899999999999999998 67777777655 7899999
Q ss_pred EcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCe
Q 019258 216 IHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGI 295 (343)
Q Consensus 216 ~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~ 295 (343)
|+|++. ++++++.||.|++||++..... ... ..|...|.+++|+|++ .+++++.||.
T Consensus 255 ~~~~~~-~l~~~~~d~~i~i~d~~~~~~~-~~~----------~~~~~~i~~~~~~~~~-----------~l~~~~~d~~ 311 (425)
T 1r5m_A 255 FNDTNK-LLLSASDDGTLRIWHGGNGNSQ-NCF----------YGHSQSIVSASWVGDD-----------KVISCSMDGS 311 (425)
T ss_dssp EETTTT-EEEEEETTSCEEEECSSSBSCS-EEE----------CCCSSCEEEEEEETTT-----------EEEEEETTSE
T ss_pred ECCCCC-EEEEEcCCCEEEEEECCCCccc-eEe----------cCCCccEEEEEECCCC-----------EEEEEeCCCc
Confidence 999886 5678999999999999875443 333 4688999999999975 4899999999
Q ss_pred EEEEecCCC-c-ccccccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 296 LAVVEQGEE-P-FELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 296 i~~~~~~~~-~-~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
|++|+.... . ..+..+..++.++.++| ++.+|++++.++.|++|+-
T Consensus 312 i~i~d~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 312 VRLWSLKQNTLLALSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEECT-TSSEEEEEETTSCEEEEEC
T ss_pred EEEEECCCCcEeEecccCCccEEEEEEcC-CCCEEEEEECCCeEEEEEC
Confidence 999997533 2 22333457899999999 5799999999999999973
No 60
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.9e-30 Score=228.26 Aligned_cols=239 Identities=15% Similarity=0.142 Sum_probs=193.3
Q ss_pred CCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCC
Q 019258 68 WTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIG 144 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~ 144 (343)
..|.+.|++++|+ ++++|++++.||.|++|++...+..... ..|...|.++.|+ ++.+++++.|+.|++||+++
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh---ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 4688999999999 8899999999999999999765544333 3689999999998 88999999999999999999
Q ss_pred CceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeE
Q 019258 145 GGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~ 223 (343)
++ ....+..|.. .|.+++|+| ++.+++++.|+.|++||++. ++.+..+..+. .+|.+++|+|++. +
T Consensus 97 ~~-~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~~-------~~v~~~~~~~~~~-~ 163 (312)
T 4ery_A 97 GK-CLKTLKGHSN-YVFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCLKTLPAHS-------DPVSAVHFNRDGS-L 163 (312)
T ss_dssp CC-EEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEETTT---CCEEEEECCCS-------SCEEEEEECTTSS-E
T ss_pred Cc-EEEEEcCCCC-CEEEEEEcCCCCEEEEEeCCCcEEEEECCC---CEEEEEecCCC-------CcEEEEEEcCCCC-E
Confidence 85 5555556665 799999999 88999999999999999998 67777777655 7899999999876 5
Q ss_pred EEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 224 CLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 224 ~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
+++|+.||.|++||+++.+....+. ..+...+..++|+|++. +|++++.||.|++|+...
T Consensus 164 l~~~~~d~~i~~wd~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~----------~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 164 IVSSSYDGLCRIWDTASGQCLKTLI----------DDDNPPVSFVKFSPNGK----------YILAATLDNTLKLWDYSK 223 (312)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEEC----------CSSCCCEEEEEECTTSS----------EEEEEETTTEEEEEETTT
T ss_pred EEEEeCCCcEEEEECCCCceeeEEe----------ccCCCceEEEEECCCCC----------EEEEEcCCCeEEEEECCC
Confidence 6899999999999999866555544 45677899999999987 799999999999999754
Q ss_pred Cc-c-cccccccc--cceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 304 EP-F-ELLAEPCA--INSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 304 ~~-~-~~~~~~~~--i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.. . .+..+... .....+++.++.+|++|++++.|++|+-
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 224 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence 32 2 22222221 2223344335689999999999999973
No 61
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.5e-30 Score=230.90 Aligned_cols=250 Identities=14% Similarity=0.155 Sum_probs=188.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++.++++|+.|+. +++|++...... .....|.+.|.+++|+ ++.+|++++.|+.|
T Consensus 74 ~h~~~V~~~~~~~----~~~~l~s~s~D~~-----v~lwd~~~~~~~--~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 74 GHNHFVSDLALSQ----ENCFAISSSWDKT-----LRLWDLRTGTTY--KRFVGHQSEVYSVAFSPDNRQILSAGAEREI 142 (343)
T ss_dssp CCSSCEEEEEECS----STTEEEEEETTSE-----EEEEETTSSCEE--EEEECCCSCEEEEEECSSTTEEEEEETTSCE
T ss_pred cCCCceEEEEECC----CCCEEEEEcCCCc-----EEEEECCCCcEE--EEEcCCCCcEEEEEECCCCCEEEEEcCCCEE
Confidence 5778899999999 8899999999975 779999653221 2234688999999999 88999999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec--C----------CEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT--G----------SECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNC 162 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~----------~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~ 162 (343)
++|++....... ......|...|.++.|+ + ..+++++.||+|++||.. . .....+..|.. .|.+
T Consensus 143 ~~wd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~-~~~~~~~~h~~-~v~~ 218 (343)
T 2xzm_R 143 KLWNILGECKFS-SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-F-QIRYTFKAHES-NVNH 218 (343)
T ss_dssp EEEESSSCEEEE-CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-T-EEEEEEECCSS-CEEE
T ss_pred EEEeccCCceee-eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-C-ceeEEEcCccc-cceE
Confidence 999997433222 22223688899999998 3 689999999999999954 3 34555556665 8999
Q ss_pred EEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCC
Q 019258 163 VKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQ 241 (343)
Q Consensus 163 ~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~ 241 (343)
++|+| +..|++++.|+.|++||++. ...+...+. +. ..|.+++|+|++. ++ +++.|+.|++||+.+.
T Consensus 219 ~~~s~~g~~l~sgs~dg~v~iwd~~~--~~~~~~~~~-~~-------~~v~~v~~sp~~~-~l-a~~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 219 LSISPNGKYIATGGKDKKLLIWDILN--LTYPQREFD-AG-------STINQIAFNPKLQ-WV-AVGTDQGVKIFNLMTQ 286 (343)
T ss_dssp EEECTTSSEEEEEETTCEEEEEESSC--CSSCSEEEE-CS-------SCEEEEEECSSSC-EE-EEEESSCEEEEESSSC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCC--Ccccceeec-CC-------CcEEEEEECCCCC-EE-EEECCCCEEEEEeCCC
Confidence 99999 88999999999999999965 234444443 22 5699999999875 44 4567889999999764
Q ss_pred ceee-eeecCC-CCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 242 QQSI-VLSGVG-TGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 242 ~~~~-~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
.... ...... ........+|...|.+++|+|++. .|++|+.||.|++|+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~----------~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 287 SKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK----------KLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp CSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC----------CEEEEETTSEEEEEEEE
T ss_pred CCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC----------eEEEecCCceEEEEEEE
Confidence 3321 111000 000001136888999999999988 79999999999999863
No 62
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.3e-30 Score=236.73 Aligned_cols=268 Identities=14% Similarity=0.167 Sum_probs=213.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLH 95 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~ 95 (343)
.+...|.++.+ +++++++|+.|+. |++|++...... .....|.+.|.+++| +++.|++|+.||.|+
T Consensus 131 ~~~~~v~~~~~------d~~~l~~g~~dg~-----i~iwd~~~~~~~--~~~~~h~~~v~~l~~-~~~~l~sg~~dg~i~ 196 (435)
T 1p22_A 131 ETSKGVYCLQY------DDQKIVSGLRDNT-----IKIWDKNTLECK--RILTGHTGSVLCLQY-DERVIITGSSDSTVR 196 (435)
T ss_dssp SSCCCEEEEEC------CSSEEEEEESSSC-----EEEEESSSCCEE--EEECCCSSCEEEEEC-CSSEEEEEETTSCEE
T ss_pred CCCCcEEEEEE------CCCEEEEEeCCCe-----EEEEeCCCCeEE--EEEcCCCCcEEEEEE-CCCEEEEEcCCCeEE
Confidence 34556777765 5788999999975 779999543221 222358899999999 588999999999999
Q ss_pred EEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceE--EEEEcCCCccceEEEEeCCCCEEEE
Q 019258 96 VLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEF--KRVYDGNGLVGFNCVKWASPTEFVT 173 (343)
Q Consensus 96 v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~l~t 173 (343)
+|++...+.+... ..|...|.++.++++.+++++.||.|++||+.++... ......|.. .|.+++| .++.+++
T Consensus 197 vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~-~~~~l~s 271 (435)
T 1p22_A 197 VWDVNTGEMLNTL---IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVVDF-DDKYIVS 271 (435)
T ss_dssp EEESSSCCEEEEE---CCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS-CEEEEEE-ETTEEEE
T ss_pred EEECCCCcEEEEE---cCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC-cEEEEEe-CCCEEEE
Confidence 9999866554433 3689999999999889999999999999999876432 245556665 8999998 4678999
Q ss_pred EeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCC
Q 019258 174 GGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTG 253 (343)
Q Consensus 174 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~ 253 (343)
++.|+.|++||++. ++.+..+..+. ..|.++++++ .++++|+.||.|++||++++..... .
T Consensus 272 ~~~dg~i~vwd~~~---~~~~~~~~~~~-------~~v~~~~~~~---~~l~~g~~dg~i~iwd~~~~~~~~~-~----- 332 (435)
T 1p22_A 272 ASGDRTIKVWNTST---CEFVRTLNGHK-------RGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLRV-L----- 332 (435)
T ss_dssp EETTSEEEEEETTT---CCEEEEEECCS-------SCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEE-E-----
T ss_pred EeCCCeEEEEECCc---CcEEEEEcCCC-------CcEEEEEeCC---CEEEEEeCCCeEEEEECCCCCEEEE-E-----
Confidence 99999999999998 77888887665 7799999964 3678999999999999998654433 3
Q ss_pred cccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-----------cccccccccccceeeecC
Q 019258 254 EAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-----------PFELLAEPCAINSFDIDP 322 (343)
Q Consensus 254 ~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-----------~~~~~~~~~~i~s~~~~~ 322 (343)
..|...|.+++|+ +. .+++++.||.|++|+.... ...+..+..+|.++++++
T Consensus 333 -----~~h~~~v~~~~~~--~~----------~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~ 395 (435)
T 1p22_A 333 -----EGHEELVRCIRFD--NK----------RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE 395 (435)
T ss_dssp -----CCCSSCEEEEECC--SS----------EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECS
T ss_pred -----eCCcCcEEEEEec--CC----------EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCC
Confidence 5689999999993 33 7999999999999996321 223334457899999964
Q ss_pred CCCCeeEEccCCceEEEEe
Q 019258 323 QNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 323 ~~~~~l~~~~~~~~i~~~~ 341 (343)
.+|++|++|+.|++|+
T Consensus 396 ---~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 396 ---FQIVSSSHDDTILIWD 411 (435)
T ss_dssp ---SCEEECCSSSEEEEEC
T ss_pred ---CEEEEEeCCCEEEEEE
Confidence 8899999999999997
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-30 Score=234.91 Aligned_cols=250 Identities=13% Similarity=0.211 Sum_probs=193.6
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-C--CCeEEEEcCCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-H--QSLVAASTLSG 92 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~--~~~l~~~s~dg 92 (343)
.|...|.+++|+| ++++|++|+.|+. |++|++.............|.+.|.+++|+ + +.+|++++.||
T Consensus 9 ~h~~~v~~~~~s~----~~~~l~~~~~dg~-----i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 9 AHNELIHDAVLDY----YGKRLATCSSDKT-----IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ECCCCEEEEEECS----SSSEEEEEETTSC-----EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CCcccEEEEEEcC----CCCEEEEEECCCc-----EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 4888999999999 8999999999965 779999532221112234688999999997 4 79999999999
Q ss_pred cEEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCce-EEEEEcCCCccceEEEEeCC
Q 019258 93 SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGE-FKRVYDGNGLVGFNCVKWAS 167 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~-~~~~~~~~~~~~v~~~~~~~ 167 (343)
.|++|++...+...... ...|...|.++.|+ +..+++++.||.|++||+++... ....+..+.. .|.+++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-~v~~~~~~~ 157 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAV-HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAP 157 (379)
T ss_dssp CEEEEEEETTEEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT-CEEEEEECC
T ss_pred EEEEEEcCCCceeEeee-ecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC-ceEEEEEcC
Confidence 99999998654222222 23588999999998 56899999999999999987532 2233344554 799999998
Q ss_pred --------------CCEEEEEeCCCcEEEEEccccCCCCCe----eEEecccCCCCCcccCeEEEEEcCCC--CeEEEEE
Q 019258 168 --------------PTEFVTGGFGYGLQWWDLRRAGSGGPV----LQFKGNFGSQGKASGMIHSVDIHPSR--KHTCLAG 227 (343)
Q Consensus 168 --------------~~~l~t~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~v~~~p~~--~~~~~sg 227 (343)
+..+++++.|+.|++||++. .... ..+..|. .+|.+++|+|++ ..+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~h~-------~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS---DAQTYVLESTLEGHS-------DWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp CC----------CTTCEEEEEETTSCEEEEEEET---TTTEEEEEEEECCCS-------SCEEEEEECCCCSSSEEEEEE
T ss_pred ccccccccccCCCCCCEEEEEeCCCeEEEEEecC---CCcceeeEEEEeccc-------CcEeEEEECCCCCCCCeEEEE
Confidence 67899999999999999987 4433 2344343 789999999994 4678899
Q ss_pred ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
+.||.|++||++....+...... ....|...|++++|+|++. +|++++.||.|++|+..
T Consensus 228 ~~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~v~~~~~s~~g~----------~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPWKKTLL------KEEKFPDVLWRASWSLSGN----------VLALSGGDNKVTLWKEN 286 (379)
T ss_dssp ETTSCEEEEEESSTTSCCEEEES------SSSCCSSCEEEEEECSSSC----------CEEEEESSSSEEEEEEE
T ss_pred eCCCEEEEEeCCCCCccceeeee------ccccCCCcEEEEEEcCCCC----------EEEEecCCCcEEEEeCC
Confidence 99999999999886433221100 0145888999999999988 79999999999999864
No 64
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-30 Score=235.63 Aligned_cols=244 Identities=15% Similarity=0.127 Sum_probs=186.3
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEE
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLS 98 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~ 98 (343)
.|.+++|+| ++++|++|+.|+. |++|++...... .....|...|.+++|+ ++..|++++.|++|++||
T Consensus 125 ~v~~v~~s~----dg~~l~s~~~d~~-----i~iwd~~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 125 YIRSVCFSP----DGKFLATGAEDRL-----IRIWDIENRKIV--MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp BEEEEEECT----TSSEEEEEETTSC-----EEEEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEECC----CCCEEEEEcCCCe-----EEEEECCCCcEE--EEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence 499999999 8999999999975 779999653211 2234688999999999 889999999999999999
Q ss_pred ccCceeeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEE------cCCCccceEEEEeCC-C
Q 019258 99 SAMQVLLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVY------DGNGLVGFNCVKWAS-P 168 (343)
Q Consensus 99 ~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~------~~~~~~~v~~~~~~~-~ 168 (343)
+...+..... .|...+.++.++ +..+++++.||+|++||++++.....+. ..|.. .|.+++|+| +
T Consensus 194 ~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~~~g 268 (393)
T 1erj_A 194 LRTGQCSLTL----SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD-SVYSVVFTRDG 268 (393)
T ss_dssp TTTTEEEEEE----ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS-CEEEEEECTTS
T ss_pred CCCCeeEEEE----EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC-CEEEEEECCCC
Confidence 9866544333 255678999987 7899999999999999999875333321 23444 799999999 8
Q ss_pred CEEEEEeCCCcEEEEEccccCC---------CCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEcc
Q 019258 169 TEFVTGGFGYGLQWWDLRRAGS---------GGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239 (343)
Q Consensus 169 ~~l~t~~~d~~i~iwd~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~ 239 (343)
..+++++.|++|++||++.... +.....+.+|. ..|.+++++|++. ++++|+.||.|++||++
T Consensus 269 ~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 269 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK-------DFVLSVATTQNDE-YILSGSKDRGVLFWDKK 340 (393)
T ss_dssp SEEEEEETTSEEEEEEC---------------CEEEEEECCS-------SCEEEEEECGGGC-EEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEeccc-------CcEEEEEECCCCC-EEEEEeCCCeEEEEECC
Confidence 8999999999999999976110 11223344444 7799999999876 56899999999999998
Q ss_pred CCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 240 WQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
++.. ...+ .+|...|.+++|++.... ++.++ .|++||.||+|++|+..
T Consensus 341 ~~~~-~~~l----------~~h~~~v~~v~~~~~~~~-~p~~~---~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 341 SGNP-LLML----------QGHRNSVISVAVANGSSL-GPEYN---VFATGSGDCKARIWKYK 388 (393)
T ss_dssp TCCE-EEEE----------ECCSSCEEEEEECSSCTT-CTTCE---EEEEEETTSEEEEEEEE
T ss_pred CCeE-EEEE----------CCCCCCEEEEEecCCcCc-CCCCC---EEEEECCCCcEEECccc
Confidence 8554 3444 579999999999874210 00011 79999999999999874
No 65
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-29 Score=230.75 Aligned_cols=292 Identities=12% Similarity=0.123 Sum_probs=212.4
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc-----------CCCCCCeeEEEcc--CC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ-----------WTPPTRISSLSTS--HQ 82 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~-----------~~~~~~v~~v~~~--~~ 82 (343)
.|...|.+++|+| .++++|++|+.|+. |++|++........... ..|.+.|.+++|+ ++
T Consensus 41 ~h~~~v~~~~~s~---~~~~~l~~~~~dg~-----i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 41 IHGGGINTLDIEP---VEGRYMLSGGSDGV-----IVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp CCSSCEEEEEECT---TTCCEEEEEETTSC-----EEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred ccCCcEEEEEEec---CCCCEEEEEcCCCe-----EEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 4889999999999 56889999999975 77999965432221111 1388999999999 56
Q ss_pred CeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-----CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc
Q 019258 83 SLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-----GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL 157 (343)
Q Consensus 83 ~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-----~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~ 157 (343)
.+|++++.||.|++|++...+...... +...+.++.+. +..+++++.||.|++||++++. ....+..|..
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~~~~~~~~~ 187 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTADVFN----FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS-CSHILQGHRQ 187 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC-CCEEECCCCS
T ss_pred cEEEEEeCCCeEEEeeCCCCccceecc----CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc-eeeeecCCCC
Confidence 789999999999999998766554442 56788888887 3489999999999999999875 4455555665
Q ss_pred cceEEEEeCC-CC-EEEEEeCCCcEEEEEccccCCCCCeeEEecccCC--------CCCcccCeEEEEEcCCCCeEEEEE
Q 019258 158 VGFNCVKWAS-PT-EFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGS--------QGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 158 ~~v~~~~~~~-~~-~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
.|.+++|+| +. .+++++.|+.|++||++. ...++..+..+... ...+...|.+++|+|++. .+++|
T Consensus 188 -~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 263 (408)
T 4a11_B 188 -EILAVSWSPRYDYILATASADSRVKLWDVRR--ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTV 263 (408)
T ss_dssp -CEEEEEECSSCTTEEEEEETTSCEEEEETTC--SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEE
T ss_pred -cEEEEEECCCCCcEEEEEcCCCcEEEEECCC--CCcccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEe
Confidence 799999999 45 589999999999999988 33344444221100 011237899999999876 56789
Q ss_pred ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--c
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--P 305 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~ 305 (343)
+.||.|++||+++.+......... ...........+...... .+++++.|+.|++|+.... .
T Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 264 GTDNRMRLWNSSNGENTLVNYGKV-------CNNSKKGLKFTVSCGCSS---------EFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp ETTSCEEEEETTTCCBCCCCCCCC-------CCCCSSCCCCEECCSSSS---------CEEEEEETTEEEEEETTTCCEE
T ss_pred cCCCeEEEEECCCCccceeccccc-------cccccccceeEEecCCCc---------eEEEEecCCEEEEEECcCCcce
Confidence 999999999998865443322100 001111112222222233 6888899999999997532 2
Q ss_pred ccccccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 306 FELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 306 ~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
..+..+..+|.+++++| ++.+|++|++|+.|++|+
T Consensus 328 ~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~ 362 (408)
T 4a11_B 328 TMLKGHYKTVDCCVFQS-NFQELYSGSRDCNILAWV 362 (408)
T ss_dssp EEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEE
T ss_pred eeeccCCCeEEEEEEcC-CCCEEEEECCCCeEEEEe
Confidence 33334567899999999 579999999999999997
No 66
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.2e-30 Score=240.23 Aligned_cols=255 Identities=14% Similarity=0.178 Sum_probs=200.2
Q ss_pred cccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCC-------CCCCC-CccCCCCCCeeEEEcc-CC
Q 019258 12 VHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLP-------ASLTP-HSQWTPPTRISSLSTS-HQ 82 (343)
Q Consensus 12 ~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~-------~~~~~-~~~~~~~~~v~~v~~~-~~ 82 (343)
...++|...|++++|+| .++.+|++++.|+. |++|++... ....+ .....|.+.|.+++|+ .+
T Consensus 122 ~~~~~h~~~v~~l~~~p---~~~~~lat~~~dg~-----V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 193 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMP---QNACVIATKTPSSD-----VLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNL 193 (430)
T ss_dssp EEEEEESSCCSEEEEET---TEEEEEEEECSSSC-----EEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTS
T ss_pred EEEEcCCCcEEEEEECC---CCCcEEEEECCCCc-----EEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCC
Confidence 45678999999999999 33689999998865 779999541 11222 2234688899999999 55
Q ss_pred C-eEEEEcCCCcEEEEEccCce----eeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCc--eEEEEE
Q 019258 83 S-LVAASTLSGSLHVLSSAMQV----LLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGG--EFKRVY 152 (343)
Q Consensus 83 ~-~l~~~s~dg~v~v~~~~~~~----~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~--~~~~~~ 152 (343)
. +|++|+.||.|++|++.... .+........|...|.+++|+ +..|++++.||.|++||+++.. .....+
T Consensus 194 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273 (430)
T ss_dssp TTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred CCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence 5 99999999999999998521 111122233689999999997 6789999999999999998752 233344
Q ss_pred cCCCccceEEEEeCC-C-CEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC
Q 019258 153 DGNGLVGFNCVKWAS-P-TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS 230 (343)
Q Consensus 153 ~~~~~~~v~~~~~~~-~-~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d 230 (343)
..|.. .|.+++|+| . ..+++++.|+.|++||++. ...++..+..|. ..|.+++|+|++..++++++.|
T Consensus 274 ~~~~~-~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~--~~~~~~~~~~h~-------~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 274 DAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHK-------DEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp ECCSS-CEEEEEECSSCTTEEEEEETTSEEEEEETTC--TTSCSEEEECCS-------SCEEEEEECSSCTTEEEEEETT
T ss_pred ecCCC-CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC--CCCCeEEeecCC-------CCEEEEEECCCCCCEEEEEeCC
Confidence 45555 799999999 4 4788999999999999998 456677777665 7899999999998889999999
Q ss_pred CcEEEEEccCCc-------------eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEE
Q 019258 231 GTVFAWDLRWQQ-------------QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILA 297 (343)
Q Consensus 231 g~v~iwd~~~~~-------------~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~ 297 (343)
|.|++||++... ...... .+|...|.+++|+|+++. .+++++.||.|+
T Consensus 344 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----------~~h~~~v~~~~~~p~~~~---------~l~s~s~dg~i~ 404 (430)
T 2xyi_A 344 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIH----------GGHTAKISDFSWNPNEPW---------IICSVSEDNIMQ 404 (430)
T ss_dssp SCCEEEEGGGTTCCCCHHHHHHCCTTEEEEC----------CCCSSCEEEEEECSSSTT---------EEEEEETTSEEE
T ss_pred CcEEEEeCCCCccccCccccccCCcceEEEc----------CCCCCCceEEEECCCCCC---------EEEEEECCCCEE
Confidence 999999998732 122222 578899999999999886 689999999999
Q ss_pred EEecCC
Q 019258 298 VVEQGE 303 (343)
Q Consensus 298 ~~~~~~ 303 (343)
+|+...
T Consensus 405 iw~~~~ 410 (430)
T 2xyi_A 405 VWQMAE 410 (430)
T ss_dssp EEEECH
T ss_pred EeEccc
Confidence 999754
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6.8e-30 Score=236.95 Aligned_cols=272 Identities=13% Similarity=0.077 Sum_probs=210.2
Q ss_pred Ccccc-eeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc-CCCCCCeeEEEccCCCeEEEEcCCCc
Q 019258 16 PQSKY-IDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ-WTPPTRISSLSTSHQSLVAASTLSGS 93 (343)
Q Consensus 16 ~~~~~-i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~~l~~~s~dg~ 93 (343)
.|... +.++.+ ++++|++|+.|+. |++|++.... ++.. ..|.+.|.+++|+.+..|++|+.||+
T Consensus 119 ~h~~~v~~~~~~------~~~~l~sgs~dg~-----i~vwd~~~~~---~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~ 184 (464)
T 3v7d_B 119 GHMTSVITCLQF------EDNYVITGADDKM-----IRVYDSINKK---FLLQLSGHDGGVWALKYAHGGILVSGSTDRT 184 (464)
T ss_dssp CCSSSCEEEEEE------ETTEEEEEETTSC-----EEEEETTTTE---EEEEECCCSSCEEEEEECSTTEEEEEETTSC
T ss_pred CCCCCcEEEEEE------CCCEEEEEcCCCc-----EEEEECCCCc---EEEEEeCCCcCEEEEEEcCCCEEEEEeCCCC
Confidence 45555 455555 3468999999975 7799995532 2222 36899999999995559999999999
Q ss_pred EEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCceE---------------------
Q 019258 94 LHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGEF--------------------- 148 (343)
Q Consensus 94 v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~--------------------- 148 (343)
|++|++...+.+... ..|.+.|.++++. +..+++++.||+|++||+++....
T Consensus 185 i~vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
T 3v7d_B 185 VRVWDIKKGCCTHVF---EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 261 (464)
T ss_dssp EEEEETTTTEEEEEE---CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTT
T ss_pred EEEEECCCCcEEEEE---CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeE
Confidence 999999876655443 3699999999987 478999999999999999875322
Q ss_pred -EEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEE
Q 019258 149 -KRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 149 -~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
......|.. .+.++... ++.+++++.|+.|++||+++ ++++..+..+. ..|.+++|+|++. .+++|
T Consensus 262 ~~~~~~~~~~-~v~~~~~~-~~~l~~~~~d~~i~vwd~~~---~~~~~~~~~~~-------~~v~~~~~~~~~~-~l~sg 328 (464)
T 3v7d_B 262 FVGVLRGHMA-SVRTVSGH-GNIVVSGSYDNTLIVWDVAQ---MKCLYILSGHT-------DRIYSTIYDHERK-RCISA 328 (464)
T ss_dssp EEEEECCCSS-CEEEEEEE-TTEEEEEETTSCEEEEETTT---TEEEEEECCCS-------SCEEEEEEETTTT-EEEEE
T ss_pred EEEEccCccc-eEEEEcCC-CCEEEEEeCCCeEEEEECCC---CcEEEEecCCC-------CCEEEEEEcCCCC-EEEEE
Confidence 334444544 67777432 77899999999999999988 77777777665 7899999999876 56799
Q ss_pred ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccc
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFE 307 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~ 307 (343)
+.||.|++||+++++.. ... ..|...|.++.|++ . .+++++.||.|++|+.......
T Consensus 329 ~~dg~i~vwd~~~~~~~-~~~----------~~h~~~v~~~~~~~--~----------~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 329 SMDTTIRIWDLENGELM-YTL----------QGHTALVGLLRLSD--K----------FLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp ETTSCEEEEETTTTEEE-EEE----------CCCSSCEEEEEECS--S----------EEEEEETTSEEEEEETTTCCEE
T ss_pred eCCCcEEEEECCCCcEE-EEE----------eCCCCcEEEEEEcC--C----------EEEEEeCCCcEEEEECCCCcee
Confidence 99999999999985543 334 56899999999983 3 7999999999999998654332
Q ss_pred cc-ccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 308 LL-AEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 308 ~~-~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.. .....+..+.+++ ++.+|++|+ ++.|++|+-
T Consensus 386 ~~~~~~~~~~~~~~~~-~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 386 FSYHHTNLSAITTFYV-SDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp EEEECTTCCCEEEEEE-CSSEEEEEE-TTEEEEEET
T ss_pred eeecCCCCccEEEEEe-CCCEEEEec-CCeEEEEEC
Confidence 22 2345677778887 558888888 789999973
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.6e-30 Score=236.26 Aligned_cols=272 Identities=11% Similarity=0.101 Sum_probs=212.5
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc-CCCCCCeeEEEcc---CCCeEEEEcCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ-WTPPTRISSLSTS---HQSLVAASTLS 91 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~-~~~~~~v~~v~~~---~~~~l~~~s~d 91 (343)
.|...|.+++|+| ++ .+++|+.|+. +++|++.... +... ..|.+.|.+++|+ ++.+|++++.|
T Consensus 160 ~h~~~V~~l~~~~----~~-~l~s~s~dg~-----i~vwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d 226 (464)
T 3v7d_B 160 GHDGGVWALKYAH----GG-ILVSGSTDRT-----VRVWDIKKGC---CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD 226 (464)
T ss_dssp CCSSCEEEEEECS----TT-EEEEEETTSC-----EEEEETTTTE---EEEEECCCSSCEEEEEEEESSSCEEEEEEETT
T ss_pred CCCcCEEEEEEcC----CC-EEEEEeCCCC-----EEEEECCCCc---EEEEECCCCCccEEEEEecCCCCCEEEEEcCC
Confidence 4888999999998 44 8999999975 7799996532 2233 3588999999998 55789999999
Q ss_pred CcEEEEEccCceeee--------------------eeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEE
Q 019258 92 GSLHVLSSAMQVLLS--------------------VDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 92 g~v~v~~~~~~~~~~--------------------~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~ 151 (343)
|.|++|++....... .......|...|.++...++.+++++.||.|++||+++++ ....
T Consensus 227 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~ 305 (464)
T 3v7d_B 227 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK-CLYI 305 (464)
T ss_dssp SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE-EEEE
T ss_pred CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc-EEEE
Confidence 999999997443221 1122346888999998889999999999999999999985 5555
Q ss_pred EcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC
Q 019258 152 YDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS 230 (343)
Q Consensus 152 ~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d 230 (343)
+..|.. .+.+++|++ +..+++++.|+.|++||++. ++++..+..|. ..|.++++++ ..+++|+.|
T Consensus 306 ~~~~~~-~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~---~~~~~~~~~h~-------~~v~~~~~~~---~~l~s~s~d 371 (464)
T 3v7d_B 306 LSGHTD-RIYSTIYDHERKRCISASMDTTIRIWDLEN---GELMYTLQGHT-------ALVGLLRLSD---KFLVSAAAD 371 (464)
T ss_dssp ECCCSS-CEEEEEEETTTTEEEEEETTSCEEEEETTT---TEEEEEECCCS-------SCEEEEEECS---SEEEEEETT
T ss_pred ecCCCC-CEEEEEEcCCCCEEEEEeCCCcEEEEECCC---CcEEEEEeCCC-------CcEEEEEEcC---CEEEEEeCC
Confidence 566665 899999999 88999999999999999998 77777887665 7899999985 367899999
Q ss_pred CcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc--cc-
Q 019258 231 GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP--FE- 307 (343)
Q Consensus 231 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~--~~- 307 (343)
|.|++||+++........ |...+..++|+|++. .+++++ ||.|++|+..... ..
T Consensus 372 g~v~vwd~~~~~~~~~~~------------~~~~~~~~~~~~~~~----------~l~~~~-dg~i~iwd~~~g~~~~~~ 428 (464)
T 3v7d_B 372 GSIRGWDANDYSRKFSYH------------HTNLSAITTFYVSDN----------ILVSGS-ENQFNIYNLRSGKLVHAN 428 (464)
T ss_dssp SEEEEEETTTCCEEEEEE------------CTTCCCEEEEEECSS----------EEEEEE-TTEEEEEETTTCCEEESC
T ss_pred CcEEEEECCCCceeeeec------------CCCCccEEEEEeCCC----------EEEEec-CCeEEEEECCCCcEEehh
Confidence 999999999866544433 566778899999877 677777 9999999975432 22
Q ss_pred ccccccccceeeecCCCCCeeEEccCCceEEEE
Q 019258 308 LLAEPCAINSFDIDPQNPSDVICSLEWESIAIV 340 (343)
Q Consensus 308 ~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~ 340 (343)
+..+..+|.++++++ ...++++++++.++++
T Consensus 429 ~~~~~~~v~~v~~~~--~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 429 ILKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 459 (464)
T ss_dssp TTTTCSEEEEEEEET--TEEEEEEEETTEEEEE
T ss_pred hccCCCcEEEEEecC--CEEEEEEEeCCeEEEE
Confidence 334467899999986 2555555666655543
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6.5e-31 Score=233.57 Aligned_cols=280 Identities=10% Similarity=0.049 Sum_probs=210.1
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCC-CCCCCccCCCCCCeeEEEcc-CCC-eEEEEcCCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPA-SLTPHSQWTPPTRISSLSTS-HQS-LVAASTLSG 92 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~-~~~~~~~~~~~~~v~~v~~~-~~~-~l~~~s~dg 92 (343)
+|...|.+++|+| ++++|++++.|+. |++|++.... .........|...|.+++|+ ++. +|++++.||
T Consensus 9 ~h~~~v~~~~~s~----~~~~l~~~~~d~~-----v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 79 (342)
T 1yfq_A 9 APKDYISDIKIIP----SKSLLLITSWDGS-----LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG 79 (342)
T ss_dssp CCSSCEEEEEEEG----GGTEEEEEETTSE-----EEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred CCCCcEEEEEEcC----CCCEEEEEcCCCe-----EEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC
Confidence 6889999999999 8899999999965 7799995533 11134445788999999999 888 999999999
Q ss_pred cEEEEEc-cCceeeeeeccCCc--cccCeEEEEec-CCEEEEEeCCCcEEEEECCC---------CceEEEEEcCCCccc
Q 019258 93 SLHVLSS-AMQVLLSVDENSGF--HVGPISGVDLT-GSECVSVGEDGRVNLVSVIG---------GGEFKRVYDGNGLVG 159 (343)
Q Consensus 93 ~v~v~~~-~~~~~~~~~~~~~~--h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~---------~~~~~~~~~~~~~~~ 159 (343)
.|++|++ ...+... ... |...|.++.|+ +..+++++.|+.|++||+++ .+ +...+. +.. .
T Consensus 80 ~i~~wd~~~~~~~~~----~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~-~~~-~ 152 (342)
T 1yfq_A 80 EILKVDLIGSPSFQA----LTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNL-NSNNTK-VKN-K 152 (342)
T ss_dssp CEEEECSSSSSSEEE----CBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEES-CSSSSS-SCC-C
T ss_pred eEEEEEeccCCceEe----ccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCC-eeeEEe-eCC-c
Confidence 9999999 7554322 235 89999999999 89999999999999999876 42 222333 333 7
Q ss_pred eEEEEeCCCCEEEEEeCCCcEEEEEccccCCC-CCeeEEe-cccCCCCCcccCeEEEEEcC-CCCeEEEEEecCCcEEEE
Q 019258 160 FNCVKWASPTEFVTGGFGYGLQWWDLRRAGSG-GPVLQFK-GNFGSQGKASGMIHSVDIHP-SRKHTCLAGGSSGTVFAW 236 (343)
Q Consensus 160 v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~-~~~~~~~-~~~~~~~~~~~~i~~v~~~p-~~~~~~~sg~~dg~v~iw 236 (343)
+.+++|++.. +++++.|+.|++||++. .. ....... .+. ..+.+++|+| ++. ++++|+.||.|++|
T Consensus 153 v~~~~~~~~~-l~~~~~d~~i~i~d~~~--~~~~~~~~~~~~~~-------~~i~~i~~~~~~~~-~l~~~~~dg~i~i~ 221 (342)
T 1yfq_A 153 IFTMDTNSSR-LIVGMNNSQVQWFRLPL--CEDDNGTIEESGLK-------YQIRDVALLPKEQE-GYACSSIDGRVAVE 221 (342)
T ss_dssp EEEEEECSSE-EEEEESTTEEEEEESSC--CTTCCCEEEECSCS-------SCEEEEEECSGGGC-EEEEEETTSEEEEE
T ss_pred eEEEEecCCc-EEEEeCCCeEEEEECCc--cccccceeeecCCC-------CceeEEEECCCCCC-EEEEEecCCcEEEE
Confidence 9999999855 99999999999999975 11 2222222 222 6799999999 875 56899999999999
Q ss_pred EccCC-----ceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--ccccc
Q 019258 237 DLRWQ-----QQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELL 309 (343)
Q Consensus 237 d~~~~-----~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~ 309 (343)
|++.. ..+......+.. ......|...|.+++|+|++. +|++++.||.|++|+.... ...+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~----------~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRL-NLKDTNLAYPVNSIEFSPRHK----------FLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCC-CTTCCSSCCCEEEEEECTTTC----------CEEEEETTSCEEEEETTTTEEEEECC
T ss_pred EEcCCCcccccccceeeecccc-cccccccceeEEEEEEcCCCC----------EEEEecCCceEEEEcCccHhHhhhhh
Confidence 99875 133333310000 000012345999999999887 7999999999999997633 23444
Q ss_pred cc-ccccceeeecCCCCCeeEEccCCce
Q 019258 310 AE-PCAINSFDIDPQNPSDVICSLEWES 336 (343)
Q Consensus 310 ~~-~~~i~s~~~~~~~~~~l~~~~~~~~ 336 (343)
.+ ..+|.+++ + ++.+|++|+.|+.
T Consensus 291 ~~h~~~v~~~~--~-~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 291 KFNEDSVVKIA--C-SDNILCLATSDDT 315 (342)
T ss_dssp CCSSSEEEEEE--E-CSSEEEEEEECTH
T ss_pred cccCCCceEec--C-CCCeEEEEecCCc
Confidence 44 67899999 5 5689999998887
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-30 Score=229.40 Aligned_cols=244 Identities=16% Similarity=0.128 Sum_probs=191.1
Q ss_pred CCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEEC
Q 019258 68 WTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSV 142 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~ 142 (343)
..|.+.|++++|+ ++.+|++++.||.|++|++....... ......|.++|+++.|+ +..|++++.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKL-IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEE-EEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCccee-eeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 3588999999999 88999999999999999997332222 22223699999999997 789999999999999999
Q ss_pred CCCce-EEEEEcCCCccceEEEEeCC---CCEEEEEeCCCcEEEEEccccCCCC--CeeEEecccCCCCCcccCeEEEEE
Q 019258 143 IGGGE-FKRVYDGNGLVGFNCVKWAS---PTEFVTGGFGYGLQWWDLRRAGSGG--PVLQFKGNFGSQGKASGMIHSVDI 216 (343)
Q Consensus 143 ~~~~~-~~~~~~~~~~~~v~~~~~~~---~~~l~t~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~v~~ 216 (343)
.+++. ....+..|.. .|.+++|+| +..+++++.|+.|++||++. .. ....+..+. ..|.+++|
T Consensus 87 ~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~---~~~~~~~~~~~~~-------~~v~~~~~ 155 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSA-SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE---NGTTSPIIIDAHA-------IGVNSASW 155 (379)
T ss_dssp ETTEEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEETTSEEEEEECCT---TSCCCEEEEECCT-------TCEEEEEE
T ss_pred CCCceeEeeeecCCCc-ceEEEEeCCCCCCCEEEEecCCCcEEEEecCC---CCceeeEEecCCC-------CceEEEEE
Confidence 98741 3444444555 799999998 46899999999999999988 32 233344443 77999999
Q ss_pred cCC------------CCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeec---CCCCcCCC
Q 019258 217 HPS------------RKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCH---TKSSNISS 281 (343)
Q Consensus 217 ~p~------------~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~---~~~~~~~~ 281 (343)
+|. ...++++|+.||.|++||++.......... ....|...|.+++|+|+ +.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~h~~~v~~~~~sp~~~~~~------ 222 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES-------TLEGHSDWVRDVAWSPTVLLRS------ 222 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE-------EECCCSSCEEEEEECCCCSSSE------
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE-------EEecccCcEeEEEECCCCCCCC------
Confidence 994 245678999999999999987653322210 01578999999999999 55
Q ss_pred CCccceEEEecCCeEEEEecCCCc----ccccc---cccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 282 SRVLPAMFCSEDGILAVVEQGEEP----FELLA---EPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 282 ~~~~~l~s~s~dg~i~~~~~~~~~----~~~~~---~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
.|++++.||.|++|+..... ..+.. ....|.+++|+| ++.+|++++.++.|++|+
T Consensus 223 ----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 223 ----YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp ----EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEEEEE
T ss_pred ----eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEEEEe
Confidence 79999999999999976431 12222 356899999999 679999999999999997
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.98 E-value=3.7e-30 Score=254.57 Aligned_cols=279 Identities=14% Similarity=0.164 Sum_probs=221.4
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++++|++|+.|+. |++|++...... .....|.+.|.+++|+ ++.+|++++.||.|
T Consensus 11 ~h~~~v~~i~~sp----~~~~la~~~~~g~-----v~iwd~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 11 NRSDRVKGIDFHP----TEPWVLTTLYSGR-----VEIWNYETQVEV--RSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp EECSCEEEEEECS----SSSEEEEEETTSE-----EEEEETTTTEEE--EEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred cCCCceEEEEECC----CCCEEEEEeCCCE-----EEEEECCCCceE--EEEecCCCcEEEEEEeCCCCEEEEEeCCCeE
Confidence 5888999999999 8999999998864 779999553222 2223588999999999 88999999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--CCE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS--PTE 170 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~ 170 (343)
++|++...+.+... ..|.+.|+++.|+ +..+++++.||+|++||+.++......+..|.. .+.+++|+| +..
T Consensus 80 ~vw~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 80 RVFNYNTGEKVVDF---EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPST 155 (814)
T ss_dssp EEEETTTCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS-CEEEEEEETTEEEE
T ss_pred EEEECCCCcEEEEE---ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC-cEEEEEEEcCCCCE
Confidence 99999866555443 2588999999999 889999999999999999887456666666665 799999998 568
Q ss_pred EEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcC--CCCeEEEEEecCCcEEEEEccCCceeeeee
Q 019258 171 FVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP--SRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248 (343)
Q Consensus 171 l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p--~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~ 248 (343)
+++++.|+.|++||++. +.+...+..+.. ..+.+++|+| ++. ++++|+.||.|++||+++......+
T Consensus 156 l~~~~~dg~v~vwd~~~---~~~~~~~~~~~~------~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~- 224 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQ---STPNFTLTTGQE------RGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKSCVATL- 224 (814)
T ss_dssp EEEEETTSEEEEEETTC---SSCSEEEECCCT------TCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTTEEEEEE-
T ss_pred EEEEeCCCeEEEEECCC---CcceeEEecCCC------CCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCCcEEEEE-
Confidence 99999999999999988 666666654432 6699999999 665 5689999999999999886544333
Q ss_pred cCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccccccccccceeeecCCCCC
Q 019258 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLAEPCAINSFDIDPQNPS 326 (343)
Q Consensus 249 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~~~ 326 (343)
..|...|.+++|+|+++ .+++++.||.|++|+.... ...+......+.+++++|+...
T Consensus 225 ----------~~~~~~v~~~~~~~~~~----------~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 225 ----------EGHMSNVSFAVFHPTLP----------IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (814)
T ss_dssp ----------ECCSSCEEEEEECSSSS----------EEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGG
T ss_pred ----------cCCCCCEEEEEEcCCCC----------EEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCc
Confidence 46889999999999988 7999999999999997542 2233333578999999994323
Q ss_pred -eeEEccCCceEEEEe
Q 019258 327 -DVICSLEWESIAIVS 341 (343)
Q Consensus 327 -~l~~~~~~~~i~~~~ 341 (343)
++++++ ++.+.+|+
T Consensus 285 ~~~~~~~-~~~~~~~~ 299 (814)
T 3mkq_A 285 NYIASGF-DNGFTVLS 299 (814)
T ss_dssp GEEEEEE-TTEEEEEE
T ss_pred eEEEEEe-CCCEEEEE
Confidence 355555 45566554
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=1.7e-29 Score=260.80 Aligned_cols=246 Identities=13% Similarity=0.089 Sum_probs=195.3
Q ss_pred CCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCc
Q 019258 15 FPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGS 93 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~ 93 (343)
.+|...|.+++|+| +++++++|+.|+. |++|++...... .....|.+.|.+++|+ ++.+|++++.||.
T Consensus 612 ~~h~~~v~~~~~s~----~~~~l~s~~~d~~-----i~vw~~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 680 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQ----DGQRIASCGADKT-----LQVFKAETGEKL--LDIKAHEDEVLCCAFSSDDSYIATCSADKK 680 (1249)
T ss_dssp CCCSSCEEEEEECT----TSSEEEEEETTSC-----EEEEETTTCCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ecccccEEEEEECC----CCCEEEEEeCCCe-----EEEEECCCCCEE--EEeccCCCCEEEEEEecCCCEEEEEeCCCe
Confidence 36889999999999 8999999999975 779999653321 2223688999999999 8899999999999
Q ss_pred EEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-C
Q 019258 94 LHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-P 168 (343)
Q Consensus 94 v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 168 (343)
|++||+.+.+.+.... .|.+.|.++.|+ +..+++++.||.|++||++++. ....+..|.. .|.+++|+| +
T Consensus 681 v~vwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-~~~~~~~h~~-~v~~~~~sp~~ 755 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYD---EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-CRNTMFGHTN-SVNHCRFSPDD 755 (1249)
T ss_dssp EEEEETTTCCEEEEEE---CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-EEEEECCCSS-CEEEEEECSST
T ss_pred EEEEECCCCceEEEEc---CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-hhheecCCCC-CEEEEEEecCC
Confidence 9999998766554433 589999999997 4478999999999999999985 5555566666 899999999 8
Q ss_pred CEEEEEeCCCcEEEEEccccCCCCCeeEEeccc-------------------------------------------C---
Q 019258 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNF-------------------------------------------G--- 202 (343)
Q Consensus 169 ~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~-------------------------------------------~--- 202 (343)
..+++++.|+.|++||++. +.....+.... +
T Consensus 756 ~~l~s~s~dg~v~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 756 ELLASCSADGTLRLWDVRS---ANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL 832 (1249)
T ss_dssp TEEEEEESSSEEEEEEGGG---TEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEE
T ss_pred CEEEEEECCCeEEEEeCCC---CcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCce
Confidence 8999999999999999987 33322221000 0
Q ss_pred --CCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCC
Q 019258 203 --SQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNIS 280 (343)
Q Consensus 203 --~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~ 280 (343)
....+...+.+++|+|++. ++++|+.||.|++||+.+.... ... .+|...|.+++|+|++.
T Consensus 833 ~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~~~~-~~~----------~~h~~~v~~v~~spdg~----- 895 (1249)
T 3sfz_A 833 AEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDSRLKV-ADC----------RGHLSWVHGVMFSPDGS----- 895 (1249)
T ss_dssp EEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTTTEEE-EEE----------CCCSSCEEEEEECTTSS-----
T ss_pred eEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCcee-eec----------CCCccceEEEEECCCCC-----
Confidence 0001226799999999886 5678999999999999885443 333 57999999999999887
Q ss_pred CCCccceEEEecCCeEEEEec
Q 019258 281 SSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 281 ~~~~~~l~s~s~dg~i~~~~~ 301 (343)
.+++++.||.|++|+.
T Consensus 896 -----~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 896 -----SFLTASDDQTIRVWET 911 (1249)
T ss_dssp -----EEEEEETTSCEEEEEH
T ss_pred -----EEEEEeCCCeEEEEEc
Confidence 7999999999999973
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=4.8e-29 Score=230.24 Aligned_cols=257 Identities=13% Similarity=0.158 Sum_probs=206.4
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeeccCC
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSG 112 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~ 112 (343)
+++++++|+.|+. |++|++...... .....|.+.|.++.|+ ++.|++|+.||.|++|++...+.+... .
T Consensus 128 ~g~~l~sg~~dg~-----i~vwd~~~~~~~--~~~~~h~~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~---~ 196 (445)
T 2ovr_B 128 CGNRIVSGSDDNT-----LKVWSAVTGKCL--RTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETGECIHTL---Y 196 (445)
T ss_dssp ETTEEEEEETTSC-----EEEEETTTCCEE--EECCCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEE---C
T ss_pred cCCEEEEEECCCc-----EEEEECCCCcEE--EEEcCCCCCEEEEEec-CCEEEEEeCCCeEEEEECCcCcEEEEE---C
Confidence 5789999999975 779999653221 2223688999999998 789999999999999999876655433 3
Q ss_pred ccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCC
Q 019258 113 FHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGG 192 (343)
Q Consensus 113 ~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~ 192 (343)
.|...|.++.++++.+++++.||+|++||+.+++ ....+..|.. .+.++++ .+..+++++.|+.|++||++. ++
T Consensus 197 ~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~-~v~~~~~-~~~~l~~~~~dg~i~iwd~~~---~~ 270 (445)
T 2ovr_B 197 GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ-CLHVLMGHVA-AVRCVQY-DGRRVVSGAYDFMVKVWDPET---ET 270 (445)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCC-EEEEEECCSS-CEEEEEE-CSSCEEEEETTSCEEEEEGGG---TE
T ss_pred CCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCc-EEEEEcCCcc-cEEEEEE-CCCEEEEEcCCCEEEEEECCC---Cc
Confidence 6899999999999999999999999999999885 4555555655 7999999 456799999999999999998 77
Q ss_pred CeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEee
Q 019258 193 PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDC 272 (343)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 272 (343)
++..+..+. ..|.++++ ++ ..+++|+.||.|++||+++++.... . ..|...+.++.++
T Consensus 271 ~~~~~~~~~-------~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~~~-~----------~~~~~~v~~~~~~- 328 (445)
T 2ovr_B 271 CLHTLQGHT-------NRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCIHT-L----------TGHQSLTSGMELK- 328 (445)
T ss_dssp EEEEECCCS-------SCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEEEE-E----------CCCCSCEEEEEEE-
T ss_pred EeEEecCCC-------CceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEEEE-E----------cCCcccEEEEEEe-
Confidence 777777665 77999999 33 3578999999999999998654433 3 4688889888875
Q ss_pred cCCCCcCCCCCccceEEEecCCeEEEEecCCC-c-ccccc---cccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 273 HTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-P-FELLA---EPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 273 ~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~-~~~~~---~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
+. .+++++.||.|++|+.... . ..+.. +..+|.++++++ .++++|++++.|++|+-
T Consensus 329 -~~----------~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 329 -DN----------ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDL 389 (445)
T ss_dssp -TT----------EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEET
T ss_pred -CC----------EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEEC
Confidence 33 7999999999999997432 2 23322 356899999986 89999999999999973
No 74
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=5.3e-30 Score=233.59 Aligned_cols=277 Identities=14% Similarity=0.065 Sum_probs=204.2
Q ss_pred eEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC-CCC-ccCCCCCCeeEEEcc--CCCeEEEEcCCCcEEEEE
Q 019258 23 AVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL-TPH-SQWTPPTRISSLSTS--HQSLVAASTLSGSLHVLS 98 (343)
Q Consensus 23 ~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~-~~~-~~~~~~~~v~~v~~~--~~~~l~~~s~dg~v~v~~ 98 (343)
.++++| ....++++++.|+. |.+|++...... ... ....|.+.|++++|+ ++.+|++|+.||.|++|+
T Consensus 39 ~~~~~~---~~~~~~~~~~~~g~-----i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~ 110 (402)
T 2aq5_A 39 FCAVNP---KFMALICEASGGGA-----FLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWE 110 (402)
T ss_dssp SEEECS---SEEEEEBCCSSSCC-----EEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred cEEECC---CeEEEEEEEcCCCE-----EEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEE
Confidence 345555 22244445677764 779999543221 222 234688999999999 678999999999999999
Q ss_pred ccCceee----eeeccCCccccCeEEEEec--C-CEEEEEeCCCcEEEEECCCCceEEEEE--cCCCccceEEEEeCC-C
Q 019258 99 SAMQVLL----SVDENSGFHVGPISGVDLT--G-SECVSVGEDGRVNLVSVIGGGEFKRVY--DGNGLVGFNCVKWAS-P 168 (343)
Q Consensus 99 ~~~~~~~----~~~~~~~~h~~~v~~~~~~--~-~~~~s~s~dg~v~~wd~~~~~~~~~~~--~~~~~~~v~~~~~~~-~ 168 (343)
+...... ........|...|.++.|+ + ..+++++.||+|++||+++++ ....+ ..|.. .|.+++|+| +
T Consensus 111 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~-~v~~~~~~~~~ 188 (402)
T 2aq5_A 111 IPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-AVLTLGPDVHPD-TIYSVDWSRDG 188 (402)
T ss_dssp CCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-EEEEECTTTCCS-CEEEEEECTTS
T ss_pred ccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-ccEEEecCCCCC-ceEEEEECCCC
Confidence 9854211 1111123689999999999 4 689999999999999999985 55555 45555 799999999 8
Q ss_pred CEEEEEeCCCcEEEEEccccCCCCCeeEE-ecccCCCCCcccCeEEEEEcCCCCeEEEEE---ecCCcEEEEEccCCcee
Q 019258 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQF-KGNFGSQGKASGMIHSVDIHPSRKHTCLAG---GSSGTVFAWDLRWQQQS 244 (343)
Q Consensus 169 ~~l~t~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg---~~dg~v~iwd~~~~~~~ 244 (343)
..|++++.|+.|++||++. ++.+..+ ..+.+ ..+.++.|+|++. ++++| +.|+.|++||++....+
T Consensus 189 ~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~ 258 (402)
T 2aq5_A 189 ALICTSCRDKRVRVIEPRK---GTVVAEKDRPHEG------TRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEP 258 (402)
T ss_dssp SCEEEEETTSEEEEEETTT---TEEEEEEECSSCS------SSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSC
T ss_pred CEEEEEecCCcEEEEeCCC---CceeeeeccCCCC------CcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCC
Confidence 8999999999999999998 6777776 45542 3489999999864 66788 78999999999987665
Q ss_pred eeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccce-EEEecCCeEEEEecCCCc--ccccc---ccccccee
Q 019258 245 IVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPA-MFCSEDGILAVVEQGEEP--FELLA---EPCAINSF 318 (343)
Q Consensus 245 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l-~s~s~dg~i~~~~~~~~~--~~~~~---~~~~i~s~ 318 (343)
..... ..|...+..++|+|++. .+ ++++.||.|++|+..... ...+. ...++.++
T Consensus 259 ~~~~~---------~~~~~~v~~~~~s~~~~----------~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~ 319 (402)
T 2aq5_A 259 LSLQE---------LDTSSGVLLPFFDPDTN----------IVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGM 319 (402)
T ss_dssp SEEEE---------CCCCSSCEEEEEETTTT----------EEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEE
T ss_pred ceEEe---------ccCCCceeEEEEcCCCC----------EEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccce
Confidence 55442 34678899999999988 45 466689999999976433 22222 24789999
Q ss_pred eecCCCCCeeEEccCCceEEEEe
Q 019258 319 DIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 319 ~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+++| ++.+++++ ++.+++|+
T Consensus 320 ~~sp-~~~~~~s~--~~~~~~~~ 339 (402)
T 2aq5_A 320 GYMP-KRGLEVNK--CEIARFYK 339 (402)
T ss_dssp EECC-GGGSCGGG--TEEEEEEE
T ss_pred EEec-ccccceec--ceeEEEEE
Confidence 9999 44665543 45777775
No 75
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=3.2e-29 Score=225.72 Aligned_cols=297 Identities=11% Similarity=0.047 Sum_probs=204.8
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCC-C-CCceeeeeCCCCCCCCC--------CccCCCCCCeeEEEcc
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDA-D-SPSLETHSISLPASLTP--------HSQWTPPTRISSLSTS 80 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~-~-~~~l~~w~~~~~~~~~~--------~~~~~~~~~v~~v~~~ 80 (343)
....+..+.+|.+++|+| ++++||+|+.|... + .-+|++|++........ ...-.++..|.++++.
T Consensus 7 ~~~~~~~g~PV~sv~fs~----dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~ 82 (365)
T 4h5i_A 7 VTASYNVGYPAYGAKFLN----NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS 82 (365)
T ss_dssp CEEEEECSSCEEEEEEEE----TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE
T ss_pred eeeecCCCCCEEEEEEeC----CCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC
Confidence 344555667899999999 89999999866431 1 11478999854322100 1122456678888886
Q ss_pred CCCeEEEE-----------cCCCcEEEEEccCce-eeee---ecc--CCccccCeEEEEec--CCEEEE--EeCCCcEEE
Q 019258 81 HQSLVAAS-----------TLSGSLHVLSSAMQV-LLSV---DEN--SGFHVGPISGVDLT--GSECVS--VGEDGRVNL 139 (343)
Q Consensus 81 ~~~~l~~~-----------s~dg~v~v~~~~~~~-~~~~---~~~--~~~h~~~v~~~~~~--~~~~~s--~s~dg~v~~ 139 (343)
++.+++| +.|+.+++|++.... .+.. ... ...+...+.+++|+ |+.+++ ++.|++|++
T Consensus 83 -~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~i 161 (365)
T 4h5i_A 83 -KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRI 161 (365)
T ss_dssp -TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEE
T ss_pred -CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEE
Confidence 5566655 357889999986322 2211 111 12244568889998 777654 457999999
Q ss_pred EECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcC
Q 019258 140 VSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP 218 (343)
Q Consensus 140 wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p 218 (343)
||+.+++ ....+..+. .|.+++|+| +..+++++ ++.+++|+... +..+...... . +...+.+++|+|
T Consensus 162 wd~~~~~-~~~~~~~~~--~V~~v~fspdg~~l~s~s-~~~~~~~~~~~---~~~~~~~~~~-~----~~~~v~~v~fsp 229 (365)
T 4h5i_A 162 IDPSDLT-EKFEIETRG--EVKDLHFSTDGKVVAYIT-GSSLEVISTVT---GSCIARKTDF-D----KNWSLSKINFIA 229 (365)
T ss_dssp EETTTTE-EEEEEECSS--CCCEEEECTTSSEEEEEC-SSCEEEEETTT---CCEEEEECCC-C----TTEEEEEEEEEE
T ss_pred eECCCCc-EEEEeCCCC--ceEEEEEccCCceEEecc-ceeEEEEEecc---CcceeeeecC-C----CCCCEEEEEEcC
Confidence 9999985 444444333 699999999 66677666 56677777766 4544332211 1 116799999999
Q ss_pred CCCeEEEEEecCC----cEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCC
Q 019258 219 SRKHTCLAGGSSG----TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294 (343)
Q Consensus 219 ~~~~~~~sg~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg 294 (343)
++.. +++++.|+ .+++||++.......... ....|...|++++|+|++. +|++++.||
T Consensus 230 dg~~-l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~V~~~~~Spdg~----------~lasgs~D~ 291 (365)
T 4h5i_A 230 DDTV-LIAASLKKGKGIVLTKISIKSGNTSVLRSK-------QVTNRFKGITSMDVDMKGE----------LAVLASNDN 291 (365)
T ss_dssp TTEE-EEEEEESSSCCEEEEEEEEETTEEEEEEEE-------EEESSCSCEEEEEECTTSC----------EEEEEETTS
T ss_pred CCCE-EEEEecCCcceeEEeecccccceecceeee-------eecCCCCCeEeEEECCCCC----------ceEEEcCCC
Confidence 9864 56777776 688899876543221110 0156889999999999988 799999999
Q ss_pred eEEEEecCCC-c-cccc-ccccccceeeecCCCCCeeEEccCCceEEEEeCC
Q 019258 295 ILAVVEQGEE-P-FELL-AEPCAINSFDIDPQNPSDVICSLEWESIAIVSRP 343 (343)
Q Consensus 295 ~i~~~~~~~~-~-~~~~-~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~~ 343 (343)
+|++|+.... . ..++ .+..+|++++|+| +|++|++|+.|+.|+||+-|
T Consensus 292 ~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 292 SIALVKLKDLSMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp CEEEEETTTTEEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECC
T ss_pred EEEEEECCCCcEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcC
Confidence 9999997543 2 3333 3467899999999 67999999999999999865
No 76
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=1.2e-30 Score=240.57 Aligned_cols=204 Identities=14% Similarity=0.135 Sum_probs=165.3
Q ss_pred CCCCCeeEEEcc--CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECC
Q 019258 69 TPPTRISSLSTS--HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVI 143 (343)
Q Consensus 69 ~~~~~v~~v~~~--~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~ 143 (343)
+|...|++|+|+ ++.+|++|+.||.|+|||+...+....... .+|.+.|++++|+ +..|++++.||+|++||++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~-~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG-IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC-CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc-cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 467789999998 667999999999999999975543333332 3699999999997 6799999999999999998
Q ss_pred CCceEEEEEcCCC-ccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCC
Q 019258 144 GGGEFKRVYDGNG-LVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRK 221 (343)
Q Consensus 144 ~~~~~~~~~~~~~-~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~ 221 (343)
++ ........+. ...+.+++|++ +..|++|+.|+.|++||++. +.+..+..|. ..|.+++|+|++.
T Consensus 196 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~----~~~~~~~~h~-------~~v~~v~~~p~~~ 263 (435)
T 4e54_B 196 GN-ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG----KELWNLRMHK-------KKVTHVALNPCCD 263 (435)
T ss_dssp SC-EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS----CBCCCSBCCS-------SCEEEEEECTTCS
T ss_pred CC-ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc----ceeEEEeccc-------ceEEeeeecCCCc
Confidence 76 3444433322 22578899999 88999999999999999865 5555666555 7899999999998
Q ss_pred eEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEec
Q 019258 222 HTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 222 ~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~ 301 (343)
.++++|+.||.|++||+++......+. ....|...|++++|+|++. +|++++.||.|++|+.
T Consensus 264 ~~~~s~s~d~~v~iwd~~~~~~~~~~~--------~~~~h~~~v~~~~~spdg~----------~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQVRGKASFL--------YSLPHRHPVNAACFSPDGA----------RLLTTDQKSEIRVYSA 325 (435)
T ss_dssp SEEEEEETTSBCCEEETTTCCSSSCCS--------BCCBCSSCEEECCBCTTSS----------EEEEEESSSCEEEEES
T ss_pred eEEEEecCcceeeEEecccccccceEE--------EeeeccccccceeECCCCC----------eeEEEcCCCEEEEEEC
Confidence 899999999999999998765433322 1146899999999999987 7999999999999997
Q ss_pred CC
Q 019258 302 GE 303 (343)
Q Consensus 302 ~~ 303 (343)
..
T Consensus 326 ~~ 327 (435)
T 4e54_B 326 SQ 327 (435)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 77
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=9e-30 Score=227.86 Aligned_cols=277 Identities=11% Similarity=0.078 Sum_probs=205.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+|+|+|.. .++++|++|+.|+. |++|++.............|.+.|.+++|+ ++.+|++++.||.|
T Consensus 37 ~h~~~v~~~~~~~~~-~~g~~l~~~~~dg~-----i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v 110 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPT-LPGNFLIAGSWAND-----VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTA 110 (368)
T ss_dssp CCSSCEEEEEECCTT-SSSEEEEEEETTSE-----EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCCceEEEEEcCCC-CCceEEEEECCCCc-----EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcE
Confidence 588999999999910 01699999999975 779999653222213334688999999999 88899999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEe--c--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDL--T--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTE 170 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~--~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (343)
++|++...+..... .|..+|.++.| + +..+++++.||.|++||+++++ ....+..+. .+.++.+.+ ..
T Consensus 111 ~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~--~~~~~~~~~-~~ 182 (368)
T 3mmy_A 111 KMWDLSSNQAIQIA----QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN-PMMVLQLPE--RCYCADVIY-PM 182 (368)
T ss_dssp EEEETTTTEEEEEE----ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS-CSEEEECSS--CEEEEEEET-TE
T ss_pred EEEEcCCCCceeec----cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc-EEEEEecCC--CceEEEecC-Ce
Confidence 99999876655432 58899999999 5 6789999999999999999875 444444454 477776664 57
Q ss_pred EEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCC---eEEEEEecCCcEEEEEccCCce--ee
Q 019258 171 FVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRK---HTCLAGGSSGTVFAWDLRWQQQ--SI 245 (343)
Q Consensus 171 l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~---~~~~sg~~dg~v~iwd~~~~~~--~~ 245 (343)
+++++.++.+++||++. ............. ..+.++++.+... ..+++|+.||.|++||++.... +.
T Consensus 183 ~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~ 254 (368)
T 3mmy_A 183 AVVATAERGLIVYQLEN--QPSEFRRIESPLK------HQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254 (368)
T ss_dssp EEEEEGGGCEEEEECSS--SCEEEEECCCSCS------SCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHS
T ss_pred eEEEeCCCcEEEEEecc--ccchhhhcccccc------CCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccc
Confidence 88899999999999987 2222222222111 3455666554432 3478999999999999987532 22
Q ss_pred eeecCCCCcccccCCccc------------cEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--ccccccc
Q 019258 246 VLSGVGTGEAVTHSLSES------------EVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLAE 311 (343)
Q Consensus 246 ~~~~~~~~~~~~~~~h~~------------~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~~ 311 (343)
... ..|.. .|.+++|+|++. +|++++.||.|++|+.... ...+..+
T Consensus 255 ~~~----------~~~~~~~~~~~~~~~~~~v~~~~~sp~~~----------~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 314 (368)
T 3mmy_A 255 FTF----------KCHRSNGTNTSAPQDIYAVNGIAFHPVHG----------TLATVGSDGRFSFWDKDARTKLKTSEQL 314 (368)
T ss_dssp EEE----------ECSEEC----CCCEEECCEEEEEECTTTC----------CEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred eee----------eeeecccccccccccccceEEEEEecCCC----------EEEEEccCCeEEEEECCCCcEEEEecCC
Confidence 222 23443 799999999987 7999999999999997643 2333344
Q ss_pred ccccceeeecCCCCCeeEEccCCc
Q 019258 312 PCAINSFDIDPQNPSDVICSLEWE 335 (343)
Q Consensus 312 ~~~i~s~~~~~~~~~~l~~~~~~~ 335 (343)
..+|.+++|+| ++.+|++|++++
T Consensus 315 ~~~v~~~~~s~-~g~~l~~~s~d~ 337 (368)
T 3mmy_A 315 DQPISACCFNH-NGNIFAYASSYD 337 (368)
T ss_dssp SSCEEEEEECT-TSSCEEEEECCC
T ss_pred CCCceEEEECC-CCCeEEEEeccc
Confidence 67899999999 678899888765
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=2.7e-29 Score=225.55 Aligned_cols=255 Identities=11% Similarity=-0.018 Sum_probs=195.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++++|++++.|+. +++|++.............|...|.+++|+ ++.+|++++.||.|
T Consensus 50 ~h~~~v~~~~~~~----~~~~l~~~~~dg~-----i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 50 EHNGQVTGVDWAP----DSNRIVTCGTDRN-----AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120 (372)
T ss_dssp CCSSCEEEEEEET----TTTEEEEEETTSC-----EEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred CCCCcccEEEEeC----CCCEEEEEcCCCe-----EEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEE
Confidence 4788999999999 8899999999865 779999543322223345688899999999 88999999999999
Q ss_pred EEEEccCceeee-eeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECC------------------CCceEEEEEc
Q 019258 95 HVLSSAMQVLLS-VDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVI------------------GGGEFKRVYD 153 (343)
Q Consensus 95 ~v~~~~~~~~~~-~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~------------------~~~~~~~~~~ 153 (343)
++|++....... .......|...|.++.|+ +..+++++.||.|++||++ .+ .....+.
T Consensus 121 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 199 (372)
T 1k8k_C 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFG-ELMFESS 199 (372)
T ss_dssp EEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTT-CEEEECC
T ss_pred EEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchh-hheEecC
Confidence 999998544221 122234688999999998 7899999999999999964 34 3555555
Q ss_pred CCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCc
Q 019258 154 GNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT 232 (343)
Q Consensus 154 ~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~ 232 (343)
.|.. .+.+++|+| +..+++++.|+.|++||++. ++++..+..+. .++.+++|+|++. ++++| .||.
T Consensus 200 ~~~~-~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~-------~~v~~~~~~~~~~-~l~~~-~d~~ 266 (372)
T 1k8k_C 200 SSCG-WVHGVCFSANGSRVAWVSHDSTVCLADADK---KMAVATLASET-------LPLLAVTFITESS-LVAAG-HDCF 266 (372)
T ss_dssp CCSS-CEEEEEECSSSSEEEEEETTTEEEEEEGGG---TTEEEEEECSS-------CCEEEEEEEETTE-EEEEE-TTSS
T ss_pred CCCC-eEEEEEECCCCCEEEEEeCCCEEEEEECCC---CceeEEEccCC-------CCeEEEEEecCCC-EEEEE-eCCe
Confidence 5555 799999999 78999999999999999999 77887887664 7899999999875 55555 9999
Q ss_pred EEEEEccC--Cceeee-ee--------------------cC-CCCc------ccccCCccccEEEEEEeecCC---CCcC
Q 019258 233 VFAWDLRW--QQQSIV-LS--------------------GV-GTGE------AVTHSLSESEVWEVQYDCHTK---SSNI 279 (343)
Q Consensus 233 v~iwd~~~--~~~~~~-~~--------------------~~-~~~~------~~~~~~h~~~v~~v~~~p~~~---~~~~ 279 (343)
|++||++. +..... .. .. +... .....+|...|.+++|++.+. .
T Consensus 267 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~--- 343 (372)
T 1k8k_C 267 PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS--- 343 (372)
T ss_dssp CEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS---
T ss_pred EEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee---
Confidence 99999987 310000 00 00 0000 011147999999999886653 4
Q ss_pred CCCCccceEEEecCCeEEEEecC
Q 019258 280 SSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 280 ~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
+|++++.||.|++|+..
T Consensus 344 ------~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 344 ------QFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp ------EEEEEETTSEEEEEEHH
T ss_pred ------eEEEecCCCceEEEEec
Confidence 89999999999999964
No 79
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.2e-28 Score=227.65 Aligned_cols=272 Identities=14% Similarity=0.178 Sum_probs=216.5
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLH 95 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~ 95 (343)
.|...|.+++|++ +++++|+.|+. +++|++...... .....|...|.++.|. ++.|++++.||.|+
T Consensus 157 ~h~~~v~~~~~~~------~~l~s~~~dg~-----i~vwd~~~~~~~--~~~~~h~~~v~~~~~~-~~~l~s~s~dg~i~ 222 (445)
T 2ovr_B 157 GHTGGVWSSQMRD------NIIISGSTDRT-----LKVWNAETGECI--HTLYGHTSTVRCMHLH-EKRVVSGSRDATLR 222 (445)
T ss_dssp CCSSCEEEEEEET------TEEEEEETTSC-----EEEEETTTTEEE--EEECCCSSCEEEEEEE-TTEEEEEETTSEEE
T ss_pred CCCCCEEEEEecC------CEEEEEeCCCe-----EEEEECCcCcEE--EEECCCCCcEEEEEec-CCEEEEEeCCCEEE
Confidence 4778899999975 48999999975 779999653221 2223588899999996 77899999999999
Q ss_pred EEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEe
Q 019258 96 VLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175 (343)
Q Consensus 96 v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~ 175 (343)
+||+...+.+.... .|..+|.++.+++..+++++.||.|++||+++++ ....+..|.. .+.+++| .+..+++++
T Consensus 223 ~wd~~~~~~~~~~~---~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~-~v~~~~~-~~~~l~~~~ 296 (445)
T 2ovr_B 223 VWDIETGQCLHVLM---GHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTN-RVYSLQF-DGIHVVSGS 296 (445)
T ss_dssp EEESSSCCEEEEEE---CCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTE-EEEEECCCSS-CEEEEEE-CSSEEEEEE
T ss_pred EEECCCCcEEEEEc---CCcccEEEEEECCCEEEEEcCCCEEEEEECCCCc-EeEEecCCCC-ceEEEEE-CCCEEEEEe
Confidence 99998665554432 5889999999999999999999999999999884 5555566665 7999999 567899999
Q ss_pred CCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcc
Q 019258 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEA 255 (343)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 255 (343)
.|+.|++||++. ++++..+..+. ..+.++.+++ ..+++|+.||.|++||+++++....+.. .
T Consensus 297 ~d~~i~i~d~~~---~~~~~~~~~~~-------~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~---- 358 (445)
T 2ovr_B 297 LDTSIRVWDVET---GNCIHTLTGHQ-------SLTSGMELKD---NILVSGNADSTVKIWDIKTGQCLQTLQG-P---- 358 (445)
T ss_dssp TTSCEEEEETTT---CCEEEEECCCC-------SCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEEECS-T----
T ss_pred CCCeEEEEECCC---CCEEEEEcCCc-------ccEEEEEEeC---CEEEEEeCCCeEEEEECCCCcEEEEEcc-C----
Confidence 999999999998 77777777665 6788888865 3678999999999999988655444431 1
Q ss_pred cccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-c-ccc-----cccccccceeeecCCCCCee
Q 019258 256 VTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-P-FEL-----LAEPCAINSFDIDPQNPSDV 328 (343)
Q Consensus 256 ~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~-~~~-----~~~~~~i~s~~~~~~~~~~l 328 (343)
..|...|.+++|++ . .+++++.||.|++|+.... . ..+ .....+|.+++++| ++.++
T Consensus 359 ---~~~~~~v~~~~~~~--~----------~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l 422 (445)
T 2ovr_B 359 ---NKHQSAVTCLQFNK--N----------FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN-TKLVC 422 (445)
T ss_dssp ---TSCSSCEEEEEECS--S----------EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS-SEEEE
T ss_pred ---CCCCCCEEEEEECC--C----------EEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecC-CEEEE
Confidence 34889999999963 3 7999999999999997533 2 222 12346899999999 67899
Q ss_pred EEccCCce----EEEEe
Q 019258 329 ICSLEWES----IAIVS 341 (343)
Q Consensus 329 ~~~~~~~~----i~~~~ 341 (343)
++|++++. +++|+
T Consensus 423 a~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 423 AVGSRNGTEETKLLVLD 439 (445)
T ss_dssp EEECSSSSSCCEEEEEE
T ss_pred EEcccCCCCccEEEEEE
Confidence 99999986 88886
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=3.4e-29 Score=223.51 Aligned_cols=262 Identities=12% Similarity=0.145 Sum_probs=193.0
Q ss_pred cccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEc------c-CCCe
Q 019258 12 VHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLST------S-HQSL 84 (343)
Q Consensus 12 ~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~------~-~~~~ 84 (343)
+..+.|...|.+++|+|.. +++++|++|+.|+. +++|++..... .......|.+.|.++.| + ++.+
T Consensus 59 ~~~~~~~~~v~~~~~~~~~-~~~~~l~~~~~dg~-----i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~s~~~~~ 131 (357)
T 3i2n_A 59 LREIEKAKPIKCGTFGATS-LQQRYLATGDFGGN-----LHIWNLEAPEM-PVYSVKGHKEIINAIDGIGGLGIGEGAPE 131 (357)
T ss_dssp EEEEEESSCEEEEECTTCC-TTTCCEEEEETTSC-----EEEECTTSCSS-CSEEECCCSSCEEEEEEESGGGCC-CCCE
T ss_pred eeeecccCcEEEEEEcCCC-CCCceEEEecCCCe-----EEEEeCCCCCc-cEEEEEecccceEEEeeccccccCCCccE
Confidence 3445688899999999921 12799999999975 77999965331 11223468899999954 5 6789
Q ss_pred EEEEcCCCcEEEEEccCce-eeeeecc-CCccccCeEEEE----ec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCC
Q 019258 85 VAASTLSGSLHVLSSAMQV-LLSVDEN-SGFHVGPISGVD----LT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNG 156 (343)
Q Consensus 85 l~~~s~dg~v~v~~~~~~~-~~~~~~~-~~~h~~~v~~~~----~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~ 156 (343)
|++++.||.|++|++...+ .+..... ...+...|.++. |+ +..+++++.||.|++||+++++ ..... .+.
T Consensus 132 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~-~~~ 209 (357)
T 3i2n_A 132 IVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-LRWET-NIK 209 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE-EEEEE-ECS
T ss_pred EEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc-eeeec-CCC
Confidence 9999999999999998554 3333322 112244899998 44 8899999999999999999985 44443 343
Q ss_pred ccceEEEEeCC----CCEEEEEeCCCcEEEEEccccCCCCCeeEEe-----cccCCCCCcccCeEEEEEcCCCCeEEEEE
Q 019258 157 LVGFNCVKWAS----PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFK-----GNFGSQGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 157 ~~~v~~~~~~~----~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
. .+.+++|+| +..+++++.|+.|++||++. .++...+. .+. ..|.+++|+|+++.++++|
T Consensus 210 ~-~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 210 N-GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT---QHPTKGFASVSEKAHK-------STVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp S-CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE---EETTTEEEEEEEECCS-------SCEEEEEEETTEEEEEEEE
T ss_pred C-ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC---CCcccceeeeccCCCc-------CCEEEEEECCCCCcEEEEE
Confidence 3 799999996 67899999999999999998 55544443 443 7899999999987688999
Q ss_pred ecCCcEEEEEccCCceeeeeecCCC--------CcccccCCccccEEEEEEeecCCCCcCCCCCccceE-EEecCCeEEE
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGT--------GEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAM-FCSEDGILAV 298 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~-s~s~dg~i~~ 298 (343)
+.||.|++||++....+......+. ........|...|.+++|+|++. .|+ +++.||.|++
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~----------~l~~s~~~d~~i~i 348 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKR----------GLCVCSSFDQTVRV 348 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSST----------TEEEEEETTSEEEE
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCC----------eEEEEecCCCcEEE
Confidence 9999999999986543210000000 00001156899999999999988 566 8999999999
Q ss_pred EecCC
Q 019258 299 VEQGE 303 (343)
Q Consensus 299 ~~~~~ 303 (343)
|+...
T Consensus 349 w~~~~ 353 (357)
T 3i2n_A 349 LIVTK 353 (357)
T ss_dssp EEECC
T ss_pred EECCC
Confidence 99753
No 81
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.9e-29 Score=222.30 Aligned_cols=248 Identities=12% Similarity=0.199 Sum_probs=190.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCC-CCCCcc-CCCCCCeeEEEccC---CCeEEEEcC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPAS-LTPHSQ-WTPPTRISSLSTSH---QSLVAASTL 90 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~-~~~~~~-~~~~~~v~~v~~~~---~~~l~~~s~ 90 (343)
.|...|.+++|+| ++++|++|+.|+. +++|++..... ..+... ..|.+.|.+++|+. +.+|++++.
T Consensus 9 gH~~~v~~~~~~~----~~~~l~~~~~dg~-----i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~ 79 (351)
T 3f3f_A 9 GHDDLVHDVVYDF----YGRHVATCSSDQH-----IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY 79 (351)
T ss_dssp CCSSCEEEEEECS----SSSEEEEEETTSE-----EEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET
T ss_pred ccccceeEEEEcC----CCCEEEEeeCCCe-----EEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC
Confidence 5889999999999 8999999999975 77999964321 122222 36889999999983 789999999
Q ss_pred CCcEEEEEccCcee------eeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCceEEEE-----E---
Q 019258 91 SGSLHVLSSAMQVL------LSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGEFKRV-----Y--- 152 (343)
Q Consensus 91 dg~v~v~~~~~~~~------~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~~~~-----~--- 152 (343)
||.|++|++...+. .........|.+.|.++.|+ +..+++++.||.|++||+++++..... .
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 99999999985421 01122223689999999998 568999999999999999875321110 0
Q ss_pred ----cCCCccceEEEEeCC----CCEEEEEeCCCcEEEEEccccCCCCC--eeEEecccCCCCCcccCeEEEEEcCCCC-
Q 019258 153 ----DGNGLVGFNCVKWAS----PTEFVTGGFGYGLQWWDLRRAGSGGP--VLQFKGNFGSQGKASGMIHSVDIHPSRK- 221 (343)
Q Consensus 153 ----~~~~~~~v~~~~~~~----~~~l~t~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~v~~~p~~~- 221 (343)
..+.. .+.+++|+| ...+++++.++.+.+|+... +.. +..+..|. ..|.+++|+|++.
T Consensus 160 ~~~~~~~~~-~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~h~-------~~i~~~~~~p~~~~ 228 (351)
T 3f3f_A 160 SIPPANHLQ-SDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKD---GKLHVAAKLPGHK-------SLIRSISWAPSIGR 228 (351)
T ss_dssp SCCCSSCSC-CCEEEEECCCSSSCCEEEEEETTEEEEEEECTT---SCEEEEEECCCCC-------SCEEEEEECCCSSC
T ss_pred ccccCCccc-ceeEEEeccCCCCCcEEEEecCCCcEEEEccCC---CceeeeeecCCCC-------cceeEEEECCCCCC
Confidence 12333 799999998 67899999999998887766 332 33344443 7899999999873
Q ss_pred --eEEEEEecCCcEEEEEccCCc---------------------------------------------eeeeeecCCCCc
Q 019258 222 --HTCLAGGSSGTVFAWDLRWQQ---------------------------------------------QSIVLSGVGTGE 254 (343)
Q Consensus 222 --~~~~sg~~dg~v~iwd~~~~~---------------------------------------------~~~~~~~~~~~~ 254 (343)
.++++|+.||.|++||++... .+....
T Consensus 229 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 302 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH------ 302 (351)
T ss_dssp SSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEE------
T ss_pred cceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEE------
Confidence 678999999999999998742 122222
Q ss_pred ccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 255 AVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 255 ~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
.+|...|++++|+|++. +|++++.||.|++|+...
T Consensus 303 ----~~h~~~v~~~~~s~~~~----------~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 303 ----DDHNGEVWSVSWNLTGT----------ILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ----CTTSSCEEEEEECSSSC----------CEEEEETTSCEEEEEECT
T ss_pred ----ecccccEEEEEEcCCCC----------EEEEecCCCcEEEEecCc
Confidence 57899999999999987 799999999999999753
No 82
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=2.9e-30 Score=231.08 Aligned_cols=244 Identities=12% Similarity=0.147 Sum_probs=191.7
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccC-CCCCCeeEEEcc--CCCeEEEEcCCCc
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQW-TPPTRISSLSTS--HQSLVAASTLSGS 93 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~-~~~~~v~~v~~~--~~~~l~~~s~dg~ 93 (343)
+...|.+++|+|....++++|++|+.|+. |++|++.... ++..+ .|.+.|.+++|+ ++.+|++++.||.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~-----i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~ 139 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGI-----IRIINPITMQ---CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHA 139 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCE-----EEEECTTTCC---EEEEEESCCSCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCE-----EEEEEchhce---EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 55789999999954344789999999965 7799996532 23333 588999999998 6789999999999
Q ss_pred EEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceE-----------------------
Q 019258 94 LHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEF----------------------- 148 (343)
Q Consensus 94 v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~----------------------- 148 (343)
|++||+...+.+........|...|.++.|+ +..+++++.||.|++||+++++..
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 9999998766665554334699999999998 889999999999999999875311
Q ss_pred ----EEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCC--------------eeEEecccCCCCCcccC
Q 019258 149 ----KRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGP--------------VLQFKGNFGSQGKASGM 210 (343)
Q Consensus 149 ----~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 210 (343)
......+.. .|.+++|+ ++.+++++.|+.|++||++. ... +..+..+. ..
T Consensus 220 ~~~~~~~~~~~~~-~v~~~~~~-~~~l~~~~~d~~i~~wd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 287 (366)
T 3k26_A 220 HFPDFSTRDIHRN-YVDCVRWL-GDLILSKSCENAIVCWKPGK---MEDDIDKIKPSESNVTILGRFDYSQ-------CD 287 (366)
T ss_dssp CCCSEEECSSCSS-CCCEEEEE-TTEEEEECSSSEEEEEEESS---TTCCGGGCCTTCCCEEEEEEEECSS-------CC
T ss_pred ccCccccccCCcc-eEEEEEEc-CCEEEEEecCCEEEEEeCCC---ccccccccccCCcchheeccccccC-------Cc
Confidence 111122444 79999998 77999999999999999987 332 33444443 67
Q ss_pred eEEEEEcCC--CCeEEEEEecCCcEEEEEccCCcee---eeeecCCCCcccccCCc--cccEEEEEEeecCCCCcCCCCC
Q 019258 211 IHSVDIHPS--RKHTCLAGGSSGTVFAWDLRWQQQS---IVLSGVGTGEAVTHSLS--ESEVWEVQYDCHTKSSNISSSR 283 (343)
Q Consensus 211 i~~v~~~p~--~~~~~~sg~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~~~~~~~ 283 (343)
|.+++|+|+ +. ++++|+.||.|++||++..+.. ...+ ..| ...|.+++|+|++.
T Consensus 288 v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~----------~~~~~~~~v~~~~~s~~~~-------- 348 (366)
T 3k26_A 288 IWYMRFSMDFWQK-MLALGNQVGKLYVWDLEVEDPHKAKCTTL----------THHKCGAAIRQTSFSRDSS-------- 348 (366)
T ss_dssp SSCCCCEECTTSS-EEEEECTTSCEEEEECCSSSGGGCEEEEE----------CCTTCCSCEEEEEECTTSS--------
T ss_pred EEEEEEcCCCCCc-EEEEEecCCcEEEEECCCCCCccccceEE----------cccccCCceEEEEeCCCCC--------
Confidence 999999998 65 6689999999999999875432 1222 334 78999999999887
Q ss_pred ccceEEEecCCeEEEEec
Q 019258 284 VLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 284 ~~~l~s~s~dg~i~~~~~ 301 (343)
+|++++.||.|++|+.
T Consensus 349 --~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 349 --ILIAVCDDASIWRWDR 364 (366)
T ss_dssp --EEEEEETTSEEEEEEC
T ss_pred --eEEEEeCCCEEEEEEe
Confidence 7999999999999986
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.9e-29 Score=227.85 Aligned_cols=244 Identities=14% Similarity=0.211 Sum_probs=193.7
Q ss_pred ccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCC
Q 019258 13 HRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSG 92 (343)
Q Consensus 13 ~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg 92 (343)
....|...|.+++|+| ++++|++|+.|+. +++|++...... .....|.+.|.+++|. +..|++++.||
T Consensus 129 ~~~~~~~~v~~v~~s~----~~~~l~~~~~dg~-----i~iwd~~~~~~~--~~~~~~~~~v~~~~~~-~~~l~~~~~dg 196 (401)
T 4aez_A 129 AETDESTYVASVKWSH----DGSFLSVGLGNGL-----VDIYDVESQTKL--RTMAGHQARVGCLSWN-RHVLSSGSRSG 196 (401)
T ss_dssp EECCTTCCEEEEEECT----TSSEEEEEETTSC-----EEEEETTTCCEE--EEECCCSSCEEEEEEE-TTEEEEEETTS
T ss_pred eecCCCCCEEEEEECC----CCCEEEEECCCCe-----EEEEECcCCeEE--EEecCCCCceEEEEEC-CCEEEEEcCCC
Confidence 3344788999999999 8899999999975 779999653322 2223688999999995 78999999999
Q ss_pred cEEEEEccC-ceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--
Q 019258 93 SLHVLSSAM-QVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-- 167 (343)
Q Consensus 93 ~v~v~~~~~-~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-- 167 (343)
.|++|++.. ....... ..|.+.|.++.|+ +..+++++.||.|++||++++. ....+..+.. .|.+++|+|
T Consensus 197 ~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~-~v~~~~~~p~~ 271 (401)
T 4aez_A 197 AIHHHDVRIANHQIGTL---QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI-PKFTKTNHNA-AVKAVAWCPWQ 271 (401)
T ss_dssp EEEEEETTSSSCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS-EEEEECCCSS-CCCEEEECTTS
T ss_pred CEEEEecccCcceeeEE---cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC-ccEEecCCcc-eEEEEEECCCC
Confidence 999999983 3333222 2589999999998 8899999999999999999875 4555555655 799999999
Q ss_pred CCEEEEEe--CCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEE-EecCCcEEEEEccCCcee
Q 019258 168 PTEFVTGG--FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA-GGSSGTVFAWDLRWQQQS 244 (343)
Q Consensus 168 ~~~l~t~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~s-g~~dg~v~iwd~~~~~~~ 244 (343)
...+++++ .|+.|++||++. ++++..+... ..+.+++|+|++..++++ |+.||.|++||++.....
T Consensus 272 ~~ll~~~~gs~d~~i~i~d~~~---~~~~~~~~~~--------~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~ 340 (401)
T 4aez_A 272 SNLLATGGGTMDKQIHFWNAAT---GARVNTVDAG--------SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLT 340 (401)
T ss_dssp TTEEEEECCTTTCEEEEEETTT---CCEEEEEECS--------SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEE
T ss_pred CCEEEEecCCCCCEEEEEECCC---CCEEEEEeCC--------CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccce
Confidence 45666655 699999999998 6777666522 669999999998766544 558999999999875433
Q ss_pred eeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 245 IVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 245 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
.... ...|...|.+++|+|++. .|++++.||.|++|+...
T Consensus 341 ~~~~---------~~~h~~~v~~~~~s~dg~----------~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 341 KQVD---------IPAHDTRVLYSALSPDGR----------ILSTAASDENLKFWRVYD 380 (401)
T ss_dssp EEEE---------EECCSSCCCEEEECTTSS----------EEEEECTTSEEEEEECCC
T ss_pred eEEE---------ecCCCCCEEEEEECCCCC----------EEEEEeCCCcEEEEECCC
Confidence 3221 156899999999999987 799999999999999753
No 84
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=2.4e-29 Score=245.01 Aligned_cols=242 Identities=15% Similarity=0.154 Sum_probs=188.3
Q ss_pred CCCCCCeeEEEcc--CCCeEEEEcCCCcEEEEEccCceee--eeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEE
Q 019258 68 WTPPTRISSLSTS--HQSLVAASTLSGSLHVLSSAMQVLL--SVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVS 141 (343)
Q Consensus 68 ~~~~~~v~~v~~~--~~~~l~~~s~dg~v~v~~~~~~~~~--~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd 141 (343)
..|.+.|++++|+ +.++|++|+.||+|++|++...... .......+|...|.++.|+ ++.+++++.||+|++||
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 3689999999998 4578999999999999999742211 1112234699999999998 88999999999999999
Q ss_pred CCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEe-cccCCCCCcccCeEEEEEcCC
Q 019258 142 VIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFK-GNFGSQGKASGMIHSVDIHPS 219 (343)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~v~~~p~ 219 (343)
+.++. ....+..|.. .|.+++|+| +..|++++.|++|++||++. .....+. ...+ |...|.+++|+|+
T Consensus 459 ~~~~~-~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~----~~~~~~~~~~~~----h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 459 LAAGV-STRRFVGHTK-DVLSVAFSLDNRQIVSASRDRTIKLWNTLG----ECKYTISEGGEG----HRDWVSCVRFSPN 528 (694)
T ss_dssp TTTTE-EEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEECTTS----CEEEEECSSTTS----CSSCEEEEEECSC
T ss_pred CCCCc-ceeEEeCCCC-CEEEEEEeCCCCEEEEEeCCCEEEEEECCC----CcceeeccCCCC----CCCcEEEEEEeCC
Confidence 99985 4555566666 799999999 88999999999999999865 2222222 1111 2277999999998
Q ss_pred C-CeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEE
Q 019258 220 R-KHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAV 298 (343)
Q Consensus 220 ~-~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~ 298 (343)
+ ...+++|+.||+|++||++...... .+ .+|.+.|++++|+|++. .|++++.||+|++
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~-~~----------~~h~~~v~~v~~spdg~----------~l~sg~~Dg~i~i 587 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRS-TL----------AGHTGYVSTVAVSPDGS----------LCASGGKDGVVLL 587 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEE-EE----------CCCSSCEEEEEECTTSS----------EEEEEETTSBCEE
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEE-EE----------cCCCCCEEEEEEeCCCC----------EEEEEeCCCeEEE
Confidence 6 3578899999999999998854433 33 57999999999999987 7999999999999
Q ss_pred EecCCCc-ccccccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 299 VEQGEEP-FELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 299 ~~~~~~~-~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
|+..... ...+.....|.++.++| ++.+|++++ ++.|++|+-
T Consensus 588 wd~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~-~~~i~iwd~ 630 (694)
T 3dm0_A 588 WDLAEGKKLYSLEANSVIHALCFSP-NRYWLCAAT-EHGIKIWDL 630 (694)
T ss_dssp EETTTTEEEECCBCSSCEEEEEECS-SSSEEEEEE-TTEEEEEET
T ss_pred EECCCCceEEEecCCCcEEEEEEcC-CCcEEEEEc-CCCEEEEEC
Confidence 9975432 22233456799999999 446665555 567999963
No 85
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=7.5e-29 Score=219.64 Aligned_cols=251 Identities=10% Similarity=-0.018 Sum_probs=190.3
Q ss_pred CCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCce-eeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEE
Q 019258 68 WTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQV-LLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVS 141 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~-~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd 141 (343)
..|.+.|++++|+ ++.+|++++.||.|++|++.... ..........|.++|++++|+ +..+++++.||.|++||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 4688999999999 88999999999999999998432 222222233699999999997 67999999999999999
Q ss_pred CCCCc--------eEEEEEcCCCccceEEEEeCC---CCEEEEEeCCCcEEEEEccccCCCCCeeEEec------ccCCC
Q 019258 142 VIGGG--------EFKRVYDGNGLVGFNCVKWAS---PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKG------NFGSQ 204 (343)
Q Consensus 142 ~~~~~--------~~~~~~~~~~~~~v~~~~~~~---~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~------~~~~~ 204 (343)
++++. .....+..|.. .|.+++|+| +..+++++.|+.|++||++. .+.+..+.. .....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKG-SLYSVKFAPAHLGLKLACLGNDGILRLYDALE---PSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEETTCEEEEEECSS---TTCTTCCEEEEEEESCSCCC
T ss_pred cCCCcccccccCcceeeeecccCC-ceeEEEEcCCCCCcEEEEecCCCcEEEecCCC---hHHhcccccccccccccccc
Confidence 98752 23445555655 899999998 56799999999999999988 443332221 00001
Q ss_pred CCcccCeEEEEEcCC--CCeEEEEEecCCcEEEEEccCCcee-eeeecCCCCcccccCCccccEEEEEEeecCC---CCc
Q 019258 205 GKASGMIHSVDIHPS--RKHTCLAGGSSGTVFAWDLRWQQQS-IVLSGVGTGEAVTHSLSESEVWEVQYDCHTK---SSN 278 (343)
Q Consensus 205 ~~~~~~i~~v~~~p~--~~~~~~sg~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~---~~~ 278 (343)
..+...+.+++|+|+ ...++++++.|+.+.+|+....... .... ..|...|.+++|+|++. .
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~h~~~i~~~~~~p~~~~~~~-- 231 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKL----------PGHKSLIRSISWAPSIGRWYQ-- 231 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEEC----------CCCCSCEEEEEECCCSSCSSE--
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeec----------CCCCcceeEEEECCCCCCcce--
Confidence 112267999999997 3457789999999988887664432 2333 57999999999999972 3
Q ss_pred CCCCCccceEEEecCCeEEEEecCCC-----------------------------------------------c-ccccc
Q 019258 279 ISSSRVLPAMFCSEDGILAVVEQGEE-----------------------------------------------P-FELLA 310 (343)
Q Consensus 279 ~~~~~~~~l~s~s~dg~i~~~~~~~~-----------------------------------------------~-~~~~~ 310 (343)
.|++++.||.|++|+.... . ..+..
T Consensus 232 -------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
T 3f3f_A 232 -------LIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD 304 (351)
T ss_dssp -------EEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECT
T ss_pred -------EEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec
Confidence 7999999999999986532 1 11122
Q ss_pred cccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 311 EPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 311 ~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
+..+|++++++| ++++|++|+.|+.|++|+-
T Consensus 305 h~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 305 HNGEVWSVSWNL-TGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp TSSCEEEEEECS-SSCCEEEEETTSCEEEEEE
T ss_pred ccccEEEEEEcC-CCCEEEEecCCCcEEEEec
Confidence 346899999999 5799999999999999973
No 86
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=1.9e-28 Score=217.24 Aligned_cols=247 Identities=15% Similarity=0.174 Sum_probs=192.1
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| ++++|++|+.|+. +++|+....... .....+...+..+.+. .+..|++++.|+.+
T Consensus 84 ~h~~~V~~~~~s~----dg~~l~s~~~d~~-----i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~ 152 (340)
T 4aow_A 84 GHSHFVSDVVISS----DGQFALSGSWDGT-----LRLWDLTTGTTT--RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTI 152 (340)
T ss_dssp CCSSCEEEEEECT----TSSEEEEEETTSE-----EEEEETTTTEEE--EEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred CCCCCEEEEEECC----CCCEEEEEccccc-----ceEEeeccccee--eeecCCCCceeEEEEeecCccceeecCCCeE
Confidence 4678899999999 8999999999975 679998553222 2233456677788888 78899999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CC
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PT 169 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 169 (343)
++|+......... ....|...+..+.+. ...+++++.|++|++||+++++ ....+..|.. .|.+++|+| +.
T Consensus 153 ~~~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~-~~~~~~~h~~-~v~~~~~s~~~~ 228 (340)
T 4aow_A 153 KLWNTLGVCKYTV--QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTG-YLNTVTVSPDGS 228 (340)
T ss_dssp EEECTTSCEEEEE--CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-EEEEECCCSS-CEEEEEECTTSS
T ss_pred EEEEeCCCceEEE--EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-eeeEecCCCC-cEEEEEECCCCC
Confidence 9999875443322 233688999999987 4578999999999999999984 5666666766 899999999 88
Q ss_pred EEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeec
Q 019258 170 EFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSG 249 (343)
Q Consensus 170 ~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~ 249 (343)
.|++++.|+.|++||++. .+++..+..+ ..+.++.|+|++. +++++.|+.|++||++.......+..
T Consensus 229 ~l~s~s~Dg~i~iwd~~~---~~~~~~~~~~--------~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~ 295 (340)
T 4aow_A 229 LCASGGKDGQAMLWDLNE---GKHLYTLDGG--------DIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELKQ 295 (340)
T ss_dssp EEEEEETTCEEEEEETTT---TEEEEEEECS--------SCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEECC
T ss_pred EEEEEeCCCeEEEEEecc---CceeeeecCC--------ceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEeccc
Confidence 999999999999999988 6666666543 5699999999764 45678899999999987544333221
Q ss_pred CCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 250 VGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 250 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
. ........|...|++++|+|++. +|++|+.||.|++|+..
T Consensus 296 ~--~~~~~~~~h~~~v~~l~~s~dg~----------~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 296 E--VISTSSKAEPPQCTSLAWSADGQ----------TLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp C---------CCCCCEEEEEECTTSS----------EEEEEETTSCEEEEEEE
T ss_pred c--ceeeeccCCCCCEEEEEECCCCC----------EEEEEeCCCEEEEEeCC
Confidence 0 00111246889999999999987 79999999999999864
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.7e-28 Score=234.72 Aligned_cols=289 Identities=13% Similarity=0.080 Sum_probs=209.2
Q ss_pred ccc---ceeeEEecCCCCCC-CCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccC-----CCCCCeeEEEccCCCeEEE
Q 019258 17 QSK---YIDAVRWLPPLSPL-SKLAVLAIYDTDADSPSLETHSISLPASLTPHSQW-----TPPTRISSLSTSHQSLVAA 87 (343)
Q Consensus 17 ~~~---~i~~v~w~p~~~~~-~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~-----~~~~~v~~v~~~~~~~l~~ 87 (343)
|.. .|.+++|+| + +++|++++.|+. |++|++... +++..+ .|.+.|.+++|+++.+|++
T Consensus 202 ~~~~~~~v~~~~~~~----~~~~~l~~~~~dg~-----i~vwd~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ 269 (615)
T 1pgu_A 202 HHKQGSFVRDVEFSP----DSGEFVITVGSDRK-----ISCFDGKSG---EFLKYIEDDQEPVQGGIFALSWLDSQKFAT 269 (615)
T ss_dssp SSCTTCCEEEEEECS----TTCCEEEEEETTCC-----EEEEETTTC---CEEEECCBTTBCCCSCEEEEEESSSSEEEE
T ss_pred cCCCCceEEEEEECC----CCCCEEEEEeCCCe-----EEEEECCCC---CEeEEecccccccCCceEEEEEcCCCEEEE
Confidence 566 899999999 7 899999999865 779999553 333444 7889999999986789999
Q ss_pred EcCCCcEEEEEccCceeeeeeccC-CccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc--------
Q 019258 88 STLSGSLHVLSSAMQVLLSVDENS-GFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL-------- 157 (343)
Q Consensus 88 ~s~dg~v~v~~~~~~~~~~~~~~~-~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~-------- 157 (343)
++.||.|++|++...+.+...... ..+...+.++.+. +..+++++.||.|++||+.+++ +...+..|..
T Consensus 270 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~ 348 (615)
T 1pgu_A 270 VGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDE-VLKTISGHNKGITALTVN 348 (615)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEE-EEEEECCCSSCEEEEETT
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCc-EEEEEeCCCCCEEEEEec
Confidence 999999999999866655444322 2345678888887 9999999999999999998753 3333333322
Q ss_pred ------------------------cceEEEEeCCCCEEEEEeCCCcEEEEEccccCC-----------------------
Q 019258 158 ------------------------VGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGS----------------------- 190 (343)
Q Consensus 158 ------------------------~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~----------------------- 190 (343)
..|.+++|.+...+++++.|+.|++||++....
T Consensus 349 ~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 428 (615)
T 1pgu_A 349 PLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDD 428 (615)
T ss_dssp TTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSE
T ss_pred CcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCc
Confidence 145555553356677777777777776653100
Q ss_pred --------CCCeeE-----------------------------Eeccc-----CCCCCcccCeEEEEEcCCCCeEEEEEe
Q 019258 191 --------GGPVLQ-----------------------------FKGNF-----GSQGKASGMIHSVDIHPSRKHTCLAGG 228 (343)
Q Consensus 191 --------~~~~~~-----------------------------~~~~~-----~~~~~~~~~i~~v~~~p~~~~~~~sg~ 228 (343)
++++.. +.... .....+...|.+++|+|++. ++++|+
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~ 507 (615)
T 1pgu_A 429 LLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET-YIAAGD 507 (615)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS-EEEEEE
T ss_pred eEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC-EEEEcC
Confidence 000000 00000 00111237899999999986 568999
Q ss_pred cCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEee----------cCCCCcCCCCCccceEEEecCCeEEE
Q 019258 229 SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDC----------HTKSSNISSSRVLPAMFCSEDGILAV 298 (343)
Q Consensus 229 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p----------~~~~~~~~~~~~~~l~s~s~dg~i~~ 298 (343)
.||.|++||+++.+....+. ..|...|.+++|+| ++. +|++++.||.|++
T Consensus 508 ~dg~i~iw~~~~~~~~~~~~----------~~h~~~v~~~~~sp~~~~~~~~~~~~~----------~l~~~~~dg~i~i 567 (615)
T 1pgu_A 508 VMGKILLYDLQSREVKTSRW----------AFRTSKINAISWKPAEKGANEEEIEED----------LVATGSLDTNIFI 567 (615)
T ss_dssp TTSCEEEEETTTTEEEECCS----------CCCSSCEEEEEECCCC------CCSCC----------EEEEEETTSCEEE
T ss_pred CCCeEEEeeCCCCcceeEee----------cCCCCceeEEEEcCccccccccccCCC----------EEEEEcCCCcEEE
Confidence 99999999998865443332 23899999999999 766 8999999999999
Q ss_pred EecCCC--cc-cccccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 299 VEQGEE--PF-ELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 299 ~~~~~~--~~-~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
|+.... .. .+..+..+|.+++|+| ++. |++++.|+.|++|+
T Consensus 568 w~~~~~~~~~~~~~~h~~~v~~l~~s~-~~~-l~s~~~d~~v~iw~ 611 (615)
T 1pgu_A 568 YSVKRPMKIIKALNAHKDGVNNLLWET-PST-LVSSGADACIKRWN 611 (615)
T ss_dssp EESSCTTCCEEETTSSTTCEEEEEEEE-TTE-EEEEETTSCEEEEE
T ss_pred EECCCCceechhhhcCccceEEEEEcC-CCC-eEEecCCceEEEEe
Confidence 998643 32 3334467899999999 457 99999999999997
No 88
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.5e-29 Score=246.96 Aligned_cols=208 Identities=14% Similarity=0.111 Sum_probs=152.8
Q ss_pred ccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCC
Q 019258 13 HRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLS 91 (343)
Q Consensus 13 ~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~d 91 (343)
...+|...|.+|+|+| +++|++++.|+. |++|++... +++..+.+.+.|++++|+ ++++|++|+.|
T Consensus 53 ~~~~~~~~V~~l~fsp-----g~~L~S~s~D~~-----v~lWd~~~~---~~~~~~~~~~~V~~v~~sp~g~~l~sgs~d 119 (902)
T 2oaj_A 53 IKLEDRSAIKEMRFVK-----GIYLVVINAKDT-----VYVLSLYSQ---KVLTTVFVPGKITSIDTDASLDWMLIGLQN 119 (902)
T ss_dssp EECSSCCCEEEEEEET-----TTEEEEEETTCE-----EEEEETTTC---SEEEEEECSSCEEEEECCTTCSEEEEEETT
T ss_pred EEcCCCCCEEEEEEcC-----CCEEEEEECcCe-----EEEEECCCC---cEEEEEcCCCCEEEEEECCCCCEEEEEcCC
Confidence 3456778899999999 448999999965 779999653 334555678899999999 88999999999
Q ss_pred CcEEEEEccCceeeeee--------ccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEEcCC-----
Q 019258 92 GSLHVLSSAMQVLLSVD--------ENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVYDGN----- 155 (343)
Q Consensus 92 g~v~v~~~~~~~~~~~~--------~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~----- 155 (343)
|.|++||+......... .....|.++|++++|+ +..+++++.||+| +||+++++ +...+..+
T Consensus 120 g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~-~~~~~~~~~~~g~ 197 (902)
T 2oaj_A 120 GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE-IKQSFIYELPPFA 197 (902)
T ss_dssp SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE-EEEEECCCBCTTC
T ss_pred CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc-eEEEEecccCCcC
Confidence 99999999855432110 2235699999999998 3589999999999 99999984 55555443
Q ss_pred ------------CccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeE--Ee---cccCC----CC--CcccCe
Q 019258 156 ------------GLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQ--FK---GNFGS----QG--KASGMI 211 (343)
Q Consensus 156 ------------~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~--~~---~~~~~----~~--~~~~~i 211 (343)
+...|.+++|+| +..|++++.|++|++||++. ++++.. +. .+... .+ .+..+|
T Consensus 198 ~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~---g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V 274 (902)
T 2oaj_A 198 PGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS---GHMIMARTVFETEINVPQPDYIRDSSTNAAKI 274 (902)
T ss_dssp CCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT---CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEE
T ss_pred CCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC---CcEEEEEeecccccCCCCCcCCCCCccccCCe
Confidence 112699999999 88999999999999999988 565542 21 11100 00 012468
Q ss_pred EEEEEc----CCCCeEEEEEecC-----CcEEEEEc
Q 019258 212 HSVDIH----PSRKHTCLAGGSS-----GTVFAWDL 238 (343)
Q Consensus 212 ~~v~~~----p~~~~~~~sg~~d-----g~v~iwd~ 238 (343)
.+++|+ |++..++++|+.| +.+.+|++
T Consensus 275 ~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 275 SKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred eEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 899995 4434667777665 26777773
No 89
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-29 Score=238.64 Aligned_cols=243 Identities=13% Similarity=0.092 Sum_probs=180.8
Q ss_pred cCCCCCCeeEEEcc-CC---------CeEEE-------------------EcCCCcEEEEEccCceee-eeeccCCcccc
Q 019258 67 QWTPPTRISSLSTS-HQ---------SLVAA-------------------STLSGSLHVLSSAMQVLL-SVDENSGFHVG 116 (343)
Q Consensus 67 ~~~~~~~v~~v~~~-~~---------~~l~~-------------------~s~dg~v~v~~~~~~~~~-~~~~~~~~h~~ 116 (343)
.+.+.+.|.+|+|+ ++ .+|++ ++.|++|+||++...+.. ........|.+
T Consensus 129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~ 208 (524)
T 2j04_B 129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG 208 (524)
T ss_dssp EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCC
T ss_pred EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC
Confidence 45567888899988 33 45555 457889999999754321 11111124678
Q ss_pred CeEEEEec-C-------CEEEEEeCCCcEEEEECCCCce----------EEEEEcCCCccceEEEEeCCCCEEEEEeCCC
Q 019258 117 PISGVDLT-G-------SECVSVGEDGRVNLVSVIGGGE----------FKRVYDGNGLVGFNCVKWASPTEFVTGGFGY 178 (343)
Q Consensus 117 ~v~~~~~~-~-------~~~~s~s~dg~v~~wd~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~ 178 (343)
.|.+++|+ . ..|++++.||+|++||+.++.. +...+..|.. .|++++|++...|++|+.||
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~-~v~sv~~s~~~~lasgs~Dg 287 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS-LITTFDFLSPTTVVCGFKNG 287 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT-CEEEEEESSSSEEEEEETTS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCC-CEEEEEecCCCeEEEEeCCC
Confidence 99999998 3 5899999999999999976521 1123445555 89999999977899999999
Q ss_pred cEEEEEccccCCCCCeeEEecccCCCCCcccCeEEE--EEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCccc
Q 019258 179 GLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSV--DIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAV 256 (343)
Q Consensus 179 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v--~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 256 (343)
+|++||++. ...+...+..|. .+|.+| +|+|++..+|++|+.||+|++||+++.+.+..+.
T Consensus 288 tV~lWD~~~--~~~~~~~~~~H~-------~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-------- 350 (524)
T 2j04_B 288 FVAEFDLTD--PEVPSFYDQVHD-------SYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-------- 350 (524)
T ss_dssp EEEEEETTB--CSSCSEEEECSS-------SCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE--------
T ss_pred EEEEEECCC--CCCceEEeeccc-------ccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc--------
Confidence 999999987 234455577665 789999 4667654688999999999999999865544433
Q ss_pred ccCCcc--ccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccccccccccceeeecCCCCCeeEEcc
Q 019258 257 THSLSE--SEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLAEPCAINSFDIDPQNPSDVICSL 332 (343)
Q Consensus 257 ~~~~h~--~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~~~~l~~~~ 332 (343)
+|. ..|++++|+|++. .+++++.|++|++|+.... ...+..+..+|++++++| ++..|++|+
T Consensus 351 ---~~~~~~~v~~v~fsp~~~----------~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs 416 (524)
T 2j04_B 351 ---SRFRGSNLVPVVYCPQIY----------SYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR-LHPMVLAGS 416 (524)
T ss_dssp ---EECSCCSCCCEEEETTTT----------EEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS-SCCBCEEEE
T ss_pred ---cccccCcccceEeCCCcC----------eEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC-CCCeEEEEE
Confidence 233 3488999999877 6899999999999986532 244455567999999999 679999999
Q ss_pred CCceEEEEe
Q 019258 333 EWESIAIVS 341 (343)
Q Consensus 333 ~~~~i~~~~ 341 (343)
+|+.|++|+
T Consensus 417 ~Dgtv~lwd 425 (524)
T 2j04_B 417 ADGSLIITN 425 (524)
T ss_dssp TTTEEECCB
T ss_pred CCCEEEEEe
Confidence 999999986
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=4.8e-28 Score=222.06 Aligned_cols=240 Identities=15% Similarity=0.221 Sum_probs=189.8
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLH 95 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~ 95 (343)
.|...|.+|+|+| ++++|++|+.|+. +++|++...... .....|...+.++.+. +..|++|+.|+.++
T Consensus 145 ~~~~~V~sv~fsp----dg~~lasgs~Dg~-----v~iWd~~~~~~~--~~~~~h~~~v~~~s~~-~~~l~sgs~d~~i~ 212 (420)
T 4gga_A 145 QPGEYISSVAWIK----EGNYLAVGTSSAE-----VQLWDVQQQKRL--RNMTSHSARVGSLSWN-SYILSSGSRSGHIH 212 (420)
T ss_dssp STTCCEEEEEECT----TSSEEEEEETTSC-----EEEEETTTTEEE--EEECCCSSCEEEEEEE-TTEEEEEETTSEEE
T ss_pred CCCCcEEEEEECC----CCCEEEEEECCCe-----EEEEEcCCCcEE--EEEeCCCCceEEEeeC-CCEEEEEeCCCcee
Confidence 4677899999999 8999999999975 779999653221 2334688889998886 78999999999999
Q ss_pred EEEccCce-eeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCce---EEEEEcCCCccceEEEEeCC--
Q 019258 96 VLSSAMQV-LLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGE---FKRVYDGNGLVGFNCVKWAS-- 167 (343)
Q Consensus 96 v~~~~~~~-~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~---~~~~~~~~~~~~v~~~~~~~-- 167 (343)
+|+..... .+... ..|...+..+.+. +..+++++.|+.+++||..+++. .......+.. .|.+++|+|
T Consensus 213 ~~d~~~~~~~~~~~---~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~-~V~~~~~~p~~ 288 (420)
T 4gga_A 213 HHDVRVAEHHVATL---SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG-AVKAVAWCPWQ 288 (420)
T ss_dssp EEETTSSSCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSS-CEEEEEECTTC
T ss_pred EeeecccceeeEEe---cccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCC-ceeeeeeCCCc
Confidence 99987432 22222 3688999999998 89999999999999999976531 2333444554 799999999
Q ss_pred CCEEEEE--eCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEE-EecCCcEEEEEccCCcee
Q 019258 168 PTEFVTG--GFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA-GGSSGTVFAWDLRWQQQS 244 (343)
Q Consensus 168 ~~~l~t~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~s-g~~dg~v~iwd~~~~~~~ 244 (343)
...++++ +.|++|++||+++ +.++..+..+ ..+.++.|+|++..++++ |+.||.|++||+++.+..
T Consensus 289 ~~~la~~~gs~D~~I~iwd~~t---~~~~~~~~~~--------~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v 357 (420)
T 4gga_A 289 SNVLATGGGTSDRHIRIWNVCS---GACLSAVDAH--------SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV 357 (420)
T ss_dssp TTEEEEEECTTTCEEEEEETTT---TEEEEEEECS--------SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred ccEEEEEeecCCCEEEEEeCCc---cccceeeccc--------cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEE
Confidence 5556554 4699999999998 6666666543 569999999998877654 347999999999986544
Q ss_pred eeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 245 IVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 245 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
..+ .+|.+.|++|+|+|++. .|+|||.||+|++|+...
T Consensus 358 -~~l----------~gH~~~V~~l~~spdg~----------~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 358 -AEL----------KGHTSRVLSLTMSPDGA----------TVASAAADETLRLWRCFE 395 (420)
T ss_dssp -EEE----------CCCSSCEEEEEECTTSS----------CEEEEETTTEEEEECCSC
T ss_pred -EEE----------cCCCCCEEEEEEcCCCC----------EEEEEecCCeEEEEECCC
Confidence 444 57999999999999988 799999999999999643
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=4.8e-29 Score=257.42 Aligned_cols=284 Identities=12% Similarity=0.128 Sum_probs=224.5
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEE
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLH 95 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~ 95 (343)
+...|.+++|+| +++++++|+.|+. +++|++...... .....|.+.|.+++|+ ++..|++++.||.|+
T Consensus 960 ~~~~i~~~~~sp----~g~~l~~g~~~g~-----i~i~d~~~~~~~--~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~ 1028 (1249)
T 3sfz_A 960 PEAQVSCCCLSP----HLEYVAFGDEDGA-----IKIIELPNNRVF--SSGVGHKKAVRHIQFTADGKTLISSSEDSVIQ 1028 (1249)
T ss_dssp CCSCEEEEEECT----TSSEEEEEETTSC-----CEEEETTTTSCE--EECCCCSSCCCCEEECSSSSCEEEECSSSBEE
T ss_pred ccCcEEEEEEcC----CCCEEEEEcCCCC-----EEEEEcCCCcee--eecccCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 345799999999 8899999998865 669999653322 2234688999999999 889999999999999
Q ss_pred EEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEE
Q 019258 96 VLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVT 173 (343)
Q Consensus 96 v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t 173 (343)
+|++...+.... ..|...|.++.++ +..+++++.||+|++||+.+++ ....+..|.. .|.+++|+| +..+++
T Consensus 1029 vwd~~~~~~~~~----~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~~-~v~~~~~s~d~~~l~s 1102 (1249)
T 3sfz_A 1029 VWNWQTGDYVFL----QAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR-IERDFTCHQG-TVLSCAISSDATKFSS 1102 (1249)
T ss_dssp EEETTTTEEECC----BCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTC-CCEEEECCSS-CCCCEEECSSSSSCEE
T ss_pred EEECCCCceEEE----ecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCc-eeEEEcccCC-cEEEEEECCCCCEEEE
Confidence 999986654432 3688999999999 8899999999999999999985 4445555655 799999999 888999
Q ss_pred EeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCC
Q 019258 174 GGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTG 253 (343)
Q Consensus 174 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~ 253 (343)
++.|++|++||+.. +.++..+.+|. +.|.+++|+|++. ++++|+.||.|++||+++++....+......
T Consensus 1103 ~s~d~~v~iwd~~~---~~~~~~l~~h~-------~~v~~~~~s~dg~-~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~ 1171 (1249)
T 3sfz_A 1103 TSADKTAKIWSFDL---LSPLHELKGHN-------GCVRCSAFSLDGI-LLATGDDNGEIRIWNVSDGQLLHSCAPISVE 1171 (1249)
T ss_dssp ECCSSCCCEECSSS---SSCSBCCCCCS-------SCEEEEEECSSSS-EEEEEETTSCCCEEESSSSCCCCCCCCCC--
T ss_pred EcCCCcEEEEECCC---cceeeeeccCC-------CcEEEEEECCCCC-EEEEEeCCCEEEEEECCCCceEEEecccccc
Confidence 99999999999988 67777777665 7899999999986 5689999999999999876543322100000
Q ss_pred cccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccccccccccceeeecCCCCCeeEEc
Q 019258 254 EAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFELLAEPCAINSFDIDPQNPSDVICS 331 (343)
Q Consensus 254 ~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~~~~l~~~ 331 (343)
.....|.+.|.+++|+|++. ++++++ |.|++|+.... ...+.....+|.++.++| ++.+|+++
T Consensus 1172 --~~~~~~~~~v~~l~fs~dg~----------~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~-dg~~l~~~ 1236 (1249)
T 3sfz_A 1172 --EGTATHGGWVTDVCFSPDSK----------TLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSP-DFRTYVTV 1236 (1249)
T ss_dssp -------CCSCCCEEEECTTSS----------CEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEECS-SSCCEEEE
T ss_pred --ccccccCceEEEEEECCCCC----------EEEECC--CeEEEEECCCCceeeeeeccCCcccEEEECC-CCCEEEEe
Confidence 00135889999999999987 677775 89999996432 334344567899999999 67999999
Q ss_pred cCCceEEEEeCC
Q 019258 332 LEWESIAIVSRP 343 (343)
Q Consensus 332 ~~~~~i~~~~~~ 343 (343)
++++.|++|+-+
T Consensus 1237 ~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1237 DNLGILYILQVL 1248 (1249)
T ss_dssp CTTCCEEEECCC
T ss_pred cCCcEEEEEeec
Confidence 999999999853
No 92
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=5.5e-28 Score=216.84 Aligned_cols=270 Identities=10% Similarity=-0.000 Sum_probs=192.3
Q ss_pred CCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeE-EEEcCCC
Q 019258 15 FPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLV-AASTLSG 92 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l-~~~s~dg 92 (343)
-.|...|.+|+|+| ++.+|++|+.|+ +++|++... .......+ ..+..+++. .++.+ ++++.|+
T Consensus 16 ~~h~~~V~~v~fs~----dg~~la~g~~~~------~~iw~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQ----DQSCLILSTLKS------FEIYNVHPV---AHIMSQEM-RHLSKVRMLHRTNYVAFVTGVKE 81 (355)
T ss_dssp ---CCCCCEEEECT----TSSEEEEECSSE------EEEEEETTE---EEEEEEEC-SCCCEEEECTTSSEEEEECSSTT
T ss_pred ccCCCceEEEEECC----CCCEEEEEcCCE------EEEEecCCc---ceeeeeec-CCeEEEEEcCCCCEEEEEECCcc
Confidence 35788999999999 899999998762 679998532 11112222 246667776 45555 6677889
Q ss_pred cEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCC-ceEEEEEcCCCccceEEEEeCCCCEE
Q 019258 93 SLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGG-GEFKRVYDGNGLVGFNCVKWASPTEF 171 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~l 171 (343)
+|++||..+.+.+.... |..+|.++.++.+.++.+. |+.|++||+.+. +....+ .. . ...+++++ ..+
T Consensus 82 ~v~iWd~~~~~~~~~~~----~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~-~~--~--~~~~~~s~-~~l 150 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIK----VDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDD-IR--F--GGVCEFSN-GLL 150 (355)
T ss_dssp EEEEEETTTTEEEEEEE----CSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCC-EE--E--EEEEEEET-TEE
T ss_pred EEEEEECCCCcEEEEEE----CCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEe-cc--C--CceEEEEc-cEE
Confidence 99999998766554442 5668999999966666654 788999999876 322222 11 1 22334444 556
Q ss_pred EE--EeCCCcEEEEEccccCCCC---------------C-eeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCc-
Q 019258 172 VT--GGFGYGLQWWDLRRAGSGG---------------P-VLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT- 232 (343)
Q Consensus 172 ~t--~~~d~~i~iwd~~~~~~~~---------------~-~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~- 232 (343)
+. ++.||.|++||++. +. + +..+.+|. ++|.+++|+|++. ++++|+.||+
T Consensus 151 a~~sg~~~g~v~iwd~~~---~~~~~~~~~~~~~~~~~p~~~~~~~h~-------~~v~~~~~s~~g~-~l~s~s~d~~~ 219 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQS---SGSATTQDQGVQQKAILGKGVLIKAHT-------NPIKMVRLNRKSD-MVATCSQDGTI 219 (355)
T ss_dssp EEEESSCTTCEEEEECCC---------------------CCEEECCCS-------SCEEEEEECTTSS-EEEEEETTCSE
T ss_pred EEeCCCcCcEEEEEECCC---CCccccccccccccccCcccEEEEccC-------CceEEEEECCCCC-EEEEEeCCCCE
Confidence 55 47799999999987 33 2 55566665 8899999999875 5789999998
Q ss_pred EEEEEccCCceeeeeecCCCCcccccCC-ccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc----c
Q 019258 233 VFAWDLRWQQQSIVLSGVGTGEAVTHSL-SESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF----E 307 (343)
Q Consensus 233 v~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~----~ 307 (343)
|++||+++++....+. .+ |...|.+++|+|++. +|++++.||+|++|+...... .
T Consensus 220 v~iwd~~~~~~~~~~~----------~g~h~~~v~~~~~s~~~~----------~l~s~s~d~~v~iw~~~~~~~~~~~~ 279 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFR----------RGLDRADVVDMKWSTDGS----------KLAVVSDKWTLHVFEIFNDQDNKRHA 279 (355)
T ss_dssp EEEEETTTCCEEEEEE----------CTTCCSCEEEEEECTTSC----------EEEEEETTCEEEEEESSCCSCCCSEE
T ss_pred EEEEECCCCcEEEEEE----------cCCCCCcEEEEEECCCCC----------EEEEEECCCEEEEEEccCCCCccccc
Confidence 9999999876655554 34 899999999999987 799999999999999743211 0
Q ss_pred ccc-------------------c--ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 308 LLA-------------------E--PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 308 ~~~-------------------~--~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+.. . ..+...++|++ +++.|+.++.++.+++|.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 280 LKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWIS-ESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp TTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESS-SSEEEEEETTTTEEEEEE
T ss_pred ccceeeccccccccceeEEEeccCCCCCceEEEEeC-CCCEEEEEeCCCeEEEEE
Confidence 000 0 12236788998 568999999999998875
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-27 Score=208.66 Aligned_cols=235 Identities=13% Similarity=0.206 Sum_probs=189.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCc-cCCCCCCeeEEEccCCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHS-QWTPPTRISSLSTSHQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~-~~~~~~~v~~v~~~~~~~l~~~s~dg~v 94 (343)
.|...|.+++|+| +++++++|+.|+. +++|++.......+.. ...|...|.++.| +++.|++++.||.|
T Consensus 57 ~~~~~v~~~~~~~----~~~~l~~~~~dg~-----i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i 126 (313)
T 3odt_A 57 TGQGFLNSVCYDS----EKELLLFGGKDTM-----INGVPLFATSGEDPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTA 126 (313)
T ss_dssp ECSSCEEEEEEET----TTTEEEEEETTSC-----EEEEETTCCTTSCC-CEECCCSSCEEEEEE-ETTEEEEEETTSEE
T ss_pred cCCccEEEEEECC----CCCEEEEecCCCe-----EEEEEeeecCCCCcccchhhcccCEEEEEe-cCCEEEEEeCCCCE
Confidence 4677899999999 8999999999975 6799986543333333 3458889999999 48899999999999
Q ss_pred EEEEccCceeeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEEcC-CCccceEEEEeCCCCE
Q 019258 95 HVLSSAMQVLLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVYDG-NGLVGFNCVKWASPTE 170 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 170 (343)
++|+.. +..... ..|..++.++.+. ++.+++++.||.|++||.. .....+.. +.. .+.+++|++...
T Consensus 127 ~~~d~~--~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~-~i~~~~~~~~~~ 197 (313)
T 3odt_A 127 KVWKEG--SLVYNL---QAHNASVWDAKVVSFSENKFLTASADKTIKLWQND---KVIKTFSGIHND-VVRHLAVVDDGH 197 (313)
T ss_dssp EEEETT--EEEEEE---ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT---EEEEEECSSCSS-CEEEEEEEETTE
T ss_pred EEEcCC--cEEEec---ccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC---ceEEEEeccCcc-cEEEEEEcCCCe
Confidence 999932 222222 2588899999986 8899999999999999933 23444444 444 899999999666
Q ss_pred EEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecC
Q 019258 171 FVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGV 250 (343)
Q Consensus 171 l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~ 250 (343)
+++++.|+.|++||++. ++++..+..+. .+|.+++|+|++ . +++|+.||.|++||+++.+....+
T Consensus 198 ~~~~~~dg~i~i~d~~~---~~~~~~~~~~~-------~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~~~~~~~~--- 262 (313)
T 3odt_A 198 FISCSNDGLIKLVDMHT---GDVLRTYEGHE-------SFVYCIKLLPNG-D-IVSCGEDRTVRIWSKENGSLKQVI--- 262 (313)
T ss_dssp EEEEETTSEEEEEETTT---CCEEEEEECCS-------SCEEEEEECTTS-C-EEEEETTSEEEEECTTTCCEEEEE---
T ss_pred EEEccCCCeEEEEECCc---hhhhhhhhcCC-------ceEEEEEEecCC-C-EEEEecCCEEEEEECCCCceeEEE---
Confidence 99999999999999998 77888887665 789999999987 3 678999999999999986544443
Q ss_pred CCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 251 GTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 251 ~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
..|...|.+++|+|++. +++++.||.|++|+...
T Consensus 263 --------~~~~~~i~~~~~~~~~~-----------~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 263 --------TLPAISIWSVDCMSNGD-----------IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp --------ECSSSCEEEEEECTTSC-----------EEEEETTSCEEEEESCG
T ss_pred --------eccCceEEEEEEccCCC-----------EEEEeCCCcEEEEeCCC
Confidence 45788999999999864 67899999999999754
No 94
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=6.5e-29 Score=224.01 Aligned_cols=256 Identities=10% Similarity=-0.016 Sum_probs=177.4
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCC-CCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCc
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPA-SLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGS 93 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~-~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~ 93 (343)
.|...|.+++|+| ++++|++++.|+. +++|++.... .........|...|.+++|+ ++.+|++++.||.
T Consensus 53 ~h~~~v~~~~~s~----~~~~l~s~s~d~~-----v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 123 (377)
T 3dwl_C 53 DHDKIVTCVDWAP----KSNRIVTCSQDRN-----AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARV 123 (377)
T ss_dssp CCSSCEEEEEECT----TTCCEEEEETTSS-----EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSC
T ss_pred cCCceEEEEEEeC----CCCEEEEEeCCCe-----EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCe
Confidence 4788999999999 7899999999975 7799996544 12223445788999999999 8889999999999
Q ss_pred EEEEEccCceeeeeeccCCc-cccCeEEEEec--CCEEEEEeCCCcEEEEECCCC-----------------ceEEEEEc
Q 019258 94 LHVLSSAMQVLLSVDENSGF-HVGPISGVDLT--GSECVSVGEDGRVNLVSVIGG-----------------GEFKRVYD 153 (343)
Q Consensus 94 v~v~~~~~~~~~~~~~~~~~-h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~-----------------~~~~~~~~ 153 (343)
|++|++...+.......... |...|.+++|+ +..+++++.|++|++||+... ..+...+
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 99999985543212221223 89999999998 789999999999999998521 1233333
Q ss_pred CCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCC----eeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe
Q 019258 154 GNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGP----VLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228 (343)
Q Consensus 154 ~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~ 228 (343)
.|.. .|.+++|+| +..|++++.|+.|++||++. ++. +..+..+. .+|.+++|+|++. ++++|+
T Consensus 203 ~~~~-~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~-------~~v~~~~~s~~~~-~l~~~~ 270 (377)
T 3dwl_C 203 PSGG-WVHAVGFSPSGNALAYAGHDSSVTIAYPSA---PEQPPRALITVKLSQ-------LPLRSLLWANESA-IVAAGY 270 (377)
T ss_dssp CCSS-SEEEEEECTTSSCEEEEETTTEEC-CEECS---TTSCEEECCCEECSS-------SCEEEEEEEETTE-EEEEES
T ss_pred cCCc-eEEEEEECCCCCEEEEEeCCCcEEEEECCC---CCCcceeeEeecCCC-------CceEEEEEcCCCC-EEEEEc
Confidence 4544 799999999 88899999999999999998 555 45566554 7899999999975 567776
Q ss_pred cCCcEEEEEccCCc-eeeeeecC-----------------------------------CC-----CcccccCCccccEEE
Q 019258 229 SSGTVFAWDLRWQQ-QSIVLSGV-----------------------------------GT-----GEAVTHSLSESEVWE 267 (343)
Q Consensus 229 ~dg~v~iwd~~~~~-~~~~~~~~-----------------------------------~~-----~~~~~~~~h~~~v~~ 267 (343)
.++.+ +|+..... .....+.. .. ........|...|.+
T Consensus 271 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~ 349 (377)
T 3dwl_C 271 NYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIAT 349 (377)
T ss_dssp SSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEE
T ss_pred CCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEE
Confidence 65555 77664211 00000000 00 000111349999999
Q ss_pred EEEeecCCCCcCCCCCccceEEEecCCeEEEEe
Q 019258 268 VQYDCHTKSSNISSSRVLPAMFCSEDGILAVVE 300 (343)
Q Consensus 268 v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~ 300 (343)
|++.+.... ....++|||.||.|++|+
T Consensus 350 ~~~~~~~~~------~~~~~~s~g~Dg~i~iWd 376 (377)
T 3dwl_C 350 LRPYAGTPG------NITAFTSSGTDGRVVLWT 376 (377)
T ss_dssp EEEEEEETT------EEEEEEEEETTSEEEEEC
T ss_pred EeccCCCCC------ceEEEEeecCCCcEEEec
Confidence 998776541 001389999999999997
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-28 Score=239.23 Aligned_cols=243 Identities=14% Similarity=0.104 Sum_probs=190.5
Q ss_pred CCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEEC
Q 019258 68 WTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSV 142 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~ 142 (343)
..|.+.|++++|+ ++++|++|+.||.|++|++........ .....|.++|+++.|+ ++.+++++.||.|++||+
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~-~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEE-EEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccc-eeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 4688999999999 888999999999999999974322222 2223699999999997 678999999999999999
Q ss_pred CCCce-EEEEEcCCCccceEEEEeCC---CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcC
Q 019258 143 IGGGE-FKRVYDGNGLVGFNCVKWAS---PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP 218 (343)
Q Consensus 143 ~~~~~-~~~~~~~~~~~~v~~~~~~~---~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p 218 (343)
.++.. .......|.. .|.+++|+| +..+++++.|+.|++||++... ......+..+. ..|.+++|+|
T Consensus 85 ~~~~~~~~~~~~~h~~-~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~-~~~~~~~~~~~-------~~v~~l~~~p 155 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSA-SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-TTSPIIIDAHA-------IGVNSASWAP 155 (753)
T ss_dssp ETTEEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS-CCCCEEEECCS-------SCEEEEEECC
T ss_pred CCCcccccccccCCCC-CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC-CcceeEeecCC-------CceEEEEecC
Confidence 98741 3444455555 899999998 5789999999999999998811 12233444443 7899999999
Q ss_pred C------------CCeEEEEEecCCcEEEEEccCCcee---eeeecCCCCcccccCCccccEEEEEEeec---CCCCcCC
Q 019258 219 S------------RKHTCLAGGSSGTVFAWDLRWQQQS---IVLSGVGTGEAVTHSLSESEVWEVQYDCH---TKSSNIS 280 (343)
Q Consensus 219 ~------------~~~~~~sg~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~h~~~v~~v~~~p~---~~~~~~~ 280 (343)
. ...++++|+.||.|++||++..... .... ..|...|.+++|+|+ +.
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~----------~~h~~~V~~l~~sp~~~~~~----- 220 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL----------EGHSDWVRDVAWSPTVLLRS----- 220 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEE----------CCCSSCEEEEEECCCCSSSE-----
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeee----------cCCCCcEEEEEeccCCCCCC-----
Confidence 5 2346789999999999999876432 2333 579999999999999 55
Q ss_pred CCCccceEEEecCCeEEEEecCCCc-------ccccccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 281 SSRVLPAMFCSEDGILAVVEQGEEP-------FELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 281 ~~~~~~l~s~s~dg~i~~~~~~~~~-------~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
.+++++.||.|++|+..... .........|.+++++| ++.++++|+.++.|++|+
T Consensus 221 -----~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 221 -----YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp -----EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCB
T ss_pred -----EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEe
Confidence 79999999999999975431 11122356899999999 679999999999999997
No 96
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=7.7e-28 Score=217.59 Aligned_cols=238 Identities=15% Similarity=0.123 Sum_probs=184.5
Q ss_pred CCCCCCeeEEEcc-CC-CeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEEC
Q 019258 68 WTPPTRISSLSTS-HQ-SLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSV 142 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~~-~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~ 142 (343)
..|.+.|.+++|+ ++ .+|++|+.||.|++|++...+....... ..|.+.|.++.|+ +..+++++.|+.|++||+
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 148 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG-MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDF 148 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC-CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEET
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec-CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEEC
Confidence 4688999999999 55 8999999999999999986554443332 2599999999998 478999999999999999
Q ss_pred CCCceEEEEEcCCC-ccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCC
Q 019258 143 IGGGEFKRVYDGNG-LVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSR 220 (343)
Q Consensus 143 ~~~~~~~~~~~~~~-~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~ 220 (343)
++. .......... ...+.+++|+| +..|++++.|+.|++||++ ++++..+..+. ..|.+++|+|++
T Consensus 149 ~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~h~-------~~v~~~~~~~~~ 216 (383)
T 3ei3_B 149 SGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD----GHEIFKEKLHK-------AKVTHAEFNPRC 216 (383)
T ss_dssp TSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT----SCEEEEEECSS-------SCEEEEEECSSC
T ss_pred CCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC----CCEEEEeccCC-------CcEEEEEECCCC
Confidence 975 3444433221 12699999999 8899999999999999994 46777777665 789999999998
Q ss_pred CeEEEEEecCCcEEEEEccCCce---eeeeecCCCCcccccCCccccEEEEEEee-cCCCCcCCCCCccceEEEecCCeE
Q 019258 221 KHTCLAGGSSGTVFAWDLRWQQQ---SIVLSGVGTGEAVTHSLSESEVWEVQYDC-HTKSSNISSSRVLPAMFCSEDGIL 296 (343)
Q Consensus 221 ~~~~~sg~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~~~~~~~~~~l~s~s~dg~i 296 (343)
+.++++|+.||.|++||+++... .... ..|...|.+++|+| ++. .|++++.||.|
T Consensus 217 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----------~~~~~~v~~~~~s~~~~~----------~l~~~~~d~~i 275 (383)
T 3ei3_B 217 DWLMATSSVDATVKLWDLRNIKDKNSYIAE-----------MPHEKPVNAAYFNPTDST----------KLLTTDQRNEI 275 (383)
T ss_dssp TTEEEEEETTSEEEEEEGGGCCSTTCEEEE-----------EECSSCEEEEEECTTTSC----------EEEEEESSSEE
T ss_pred CCEEEEEeCCCEEEEEeCCCCCcccceEEE-----------ecCCCceEEEEEcCCCCC----------EEEEEcCCCcE
Confidence 86889999999999999987322 2222 24889999999999 766 79999999999
Q ss_pred EEEecCCC--ccccccc-------c----------cccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 297 AVVEQGEE--PFELLAE-------P----------CAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 297 ~~~~~~~~--~~~~~~~-------~----------~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
++|+.... ...+..+ . ..+..+.++| ++.+ +|++++.|++|+.
T Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 276 RVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP-DDQL--LLNDKRTIDIYDA 337 (383)
T ss_dssp EEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC-CTTT--CTTCCCCEEEEET
T ss_pred EEEECCCCccccccccccccccccccceEEeccCCCCceEEEecC-Cccc--ccCCCCeEEEEec
Confidence 99997532 2222211 1 2233466676 3455 7889999999974
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.5e-28 Score=226.31 Aligned_cols=250 Identities=14% Similarity=0.137 Sum_probs=180.9
Q ss_pred cCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCcee--------eeeeccCCccc------------cCeEEEEec-
Q 019258 67 QWTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVL--------LSVDENSGFHV------------GPISGVDLT- 124 (343)
Q Consensus 67 ~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~--------~~~~~~~~~h~------------~~v~~~~~~- 124 (343)
.+++.+.|++++|+ ++.+|++|+.||.|+||++...+. ........+|. ++|+++.|+
T Consensus 24 ~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 24 DVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred cccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 46678899999999 889999999999999999984431 11122223577 889999999
Q ss_pred -C--CEEEEEeCCCcEEEEECCCCceE--------------------------------------EEEE-cCCCccceEE
Q 019258 125 -G--SECVSVGEDGRVNLVSVIGGGEF--------------------------------------KRVY-DGNGLVGFNC 162 (343)
Q Consensus 125 -~--~~~~s~s~dg~v~~wd~~~~~~~--------------------------------------~~~~-~~~~~~~v~~ 162 (343)
+ ..+++++.|++|++||+.++... ...+ ..|.. .|.+
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~ 182 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY-HINS 182 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS-CCCE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc-ceEE
Confidence 4 68999999999999998763211 1122 34554 8999
Q ss_pred EEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCC
Q 019258 163 VKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQ 241 (343)
Q Consensus 163 ~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~ 241 (343)
++|+| +..|+++ .|+.|++||++. ....+..+.........+...|.+++|+|++..++++|+.||.|++||+++.
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEI--TDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTE--EEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCC--CCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 99999 7788887 899999999985 1333332211000000122789999999998567899999999999999986
Q ss_pred cee---eeeecCCCCcccccCCccc------------cEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC--C
Q 019258 242 QQS---IVLSGVGTGEAVTHSLSES------------EVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE--E 304 (343)
Q Consensus 242 ~~~---~~~~~~~~~~~~~~~~h~~------------~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~--~ 304 (343)
... ...+ ..|.. .|.+++|+|++. +|++++. |.|++|+... .
T Consensus 260 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~----------~l~~~~~-~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 260 ALCDRHSKLF----------EEPEDPSNRSFFSEIISSISDVKFSHSGR----------YMMTRDY-LSVKVWDLNMENR 318 (447)
T ss_dssp SSSCTTCEEE----------CCC-----CCHHHHHTTCEEEEEECTTSS----------EEEEEES-SEEEEEETTCCSS
T ss_pred ccccceeeEe----------ccCCCccccccccccCceEEEEEECCCCC----------EEEEeeC-CeEEEEeCCCCcc
Confidence 541 2333 34544 899999999887 7888888 9999999753 2
Q ss_pred cccccccccc----------------cceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 305 PFELLAEPCA----------------INSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 305 ~~~~~~~~~~----------------i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
....+..+.. +.+++|+| ++.+|++|+.|+.|++|+.
T Consensus 319 ~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 319 PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEET
T ss_pred ccceeeccccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEc
Confidence 2222222222 33489999 5799999999999999974
No 98
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2.6e-28 Score=221.31 Aligned_cols=254 Identities=12% Similarity=0.068 Sum_probs=192.6
Q ss_pred CcccceeeEEecCCCCCCC---CeEEEEeecCCCCCCceeeeeCCCCCCCC---CCccCCC-----CCCeeEEEcc----
Q 019258 16 PQSKYIDAVRWLPPLSPLS---KLAVLAIYDTDADSPSLETHSISLPASLT---PHSQWTP-----PTRISSLSTS---- 80 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~---~~l~t~s~D~~~~~~~l~~w~~~~~~~~~---~~~~~~~-----~~~v~~v~~~---- 80 (343)
.|...|.+++|+|....++ ++|++++.|+. |++|++....... ......| ...|.+++|+
T Consensus 60 ~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~-----i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 60 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGD-----LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSC-----EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred cCCCcEEEEEEecccccCCccccEEEEEcCCCC-----EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 5788999999999111128 89999999965 7799995433200 1222234 4889999998
Q ss_pred -CCCe-EEEEcCCCcEEEEEccC------ceeee-----eec----cCCccccCeEEEEec--CCEEEEEeCCCcEEEEE
Q 019258 81 -HQSL-VAASTLSGSLHVLSSAM------QVLLS-----VDE----NSGFHVGPISGVDLT--GSECVSVGEDGRVNLVS 141 (343)
Q Consensus 81 -~~~~-l~~~s~dg~v~v~~~~~------~~~~~-----~~~----~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd 141 (343)
++.. |++++.||.|++|++.. .+.+. ... ....|...|.++.|+ + .+++++.||.|++||
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEE
Confidence 5677 99999999999999986 43332 111 012478899999999 6 999999999999999
Q ss_pred CCCCceEEEEEcC---C---CccceEEEEeCC-CCEEEEEeCC---CcEEEEEccccCCCCCeeEEec------------
Q 019258 142 VIGGGEFKRVYDG---N---GLVGFNCVKWAS-PTEFVTGGFG---YGLQWWDLRRAGSGGPVLQFKG------------ 199 (343)
Q Consensus 142 ~~~~~~~~~~~~~---~---~~~~v~~~~~~~-~~~l~t~~~d---~~i~iwd~~~~~~~~~~~~~~~------------ 199 (343)
+++++ ....+.. | .. .+.+++|+| +..|++++.| +.|++||++. ++++..+..
T Consensus 214 ~~~~~-~~~~~~~~~~h~~~~~-~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~---~~~~~~~~~~~~~~~~~~~~~ 288 (397)
T 1sq9_A 214 LSTLR-PLYNFESQHSMINNSN-SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF---GERIGSLSVPTHSSQASLGEF 288 (397)
T ss_dssp TTTTE-EEEEEECCC---CCCC-CEEEEEECSSTTEEEEEEEETTEEEEEEEETTT---CCEEEEECBC--------CCB
T ss_pred CCCCc-eeEEEeccccccccCC-ccceEEECCCCCEEEEEecCCCCceEEEEECCC---CcccceeccCccccccccccc
Confidence 99884 5555555 4 44 799999999 8899999999 9999999998 777777765
Q ss_pred -ccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCc---------------cc
Q 019258 200 -NFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLS---------------ES 263 (343)
Q Consensus 200 -~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h---------------~~ 263 (343)
+. ..|.+++|+|++. ++++|+.||.|++||+++.+....+.... ....| ..
T Consensus 289 ~~~-------~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~ 355 (397)
T 1sq9_A 289 AHS-------SWVMSLSFNDSGE-TLCSAGWDGKLRFWDVKTKERITTLNMHC-----DDIEIEEDILAVDEHGDSLAEP 355 (397)
T ss_dssp SBS-------SCEEEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEECCG-----GGCSSGGGCCCBCTTSCBCSSC
T ss_pred ccC-------CcEEEEEECCCCC-EEEEEeCCCeEEEEEcCCCceeEEEeccc-----CcccchhhhhccccccccccCC
Confidence 43 7899999999876 56899999999999998865444433000 00034 89
Q ss_pred cEEEEEEeecCC---------CCcCCCCCccceEEEecCCeEEEEecC
Q 019258 264 EVWEVQYDCHTK---------SSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 264 ~v~~v~~~p~~~---------~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
.|.+++|+|++. . .|++++.||.|++|+..
T Consensus 356 ~v~~~~~~~~g~~~~~~~~~~~---------~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 356 GVFDVKFLKKGWRSGMGADLNE---------SLCCVCLDRSIRWFREA 394 (397)
T ss_dssp CEEEEEEECTTTSBSTTCTTSC---------EEEEEETTTEEEEEEEE
T ss_pred ceeEEEeccccccccccccccc---------eEEEecCCCcEEEEEcC
Confidence 999999999972 3 79999999999999864
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=6.2e-28 Score=230.88 Aligned_cols=278 Identities=11% Similarity=0.087 Sum_probs=213.8
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC-CC-CccCCCCCC-eeEEEcc---CCCeEEEEc
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL-TP-HSQWTPPTR-ISSLSTS---HQSLVAAST 89 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~-~~-~~~~~~~~~-v~~v~~~---~~~~l~~~s 89 (343)
+|...|.+++|+| ++++|++++ |+ .+.+|++...... .. .....|.+. |.+++|+ ++.+|++++
T Consensus 16 ~~~~~v~~~~~sp----dg~~l~~~~-~~-----~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~ 85 (615)
T 1pgu_A 16 TQRNFTTHLSYDP----TTNAIAYPC-GK-----SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD 85 (615)
T ss_dssp CCTTCCCCCEEET----TTTEEEEEE-TT-----EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE
T ss_pred CccCceeEEEECC----CCCEEEEec-CC-----eEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec
Confidence 5678899999999 899999998 43 4789999643111 22 233468888 9999998 467899999
Q ss_pred CCCcEEEEEccCc------eeeeeeccCCccccCeEEEEec--CCEEEEEeCC----CcEEEEECCCCceEEEEEcCCCc
Q 019258 90 LSGSLHVLSSAMQ------VLLSVDENSGFHVGPISGVDLT--GSECVSVGED----GRVNLVSVIGGGEFKRVYDGNGL 157 (343)
Q Consensus 90 ~dg~v~v~~~~~~------~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~d----g~v~~wd~~~~~~~~~~~~~~~~ 157 (343)
.||.|++|++... +... ......|..+|.++.|+ ++.+++++.+ +.|.+|| .++ ....+..|..
T Consensus 86 ~dg~v~vw~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~-~~~~~~~~~~ 161 (615)
T 1pgu_A 86 ESGKVIVWGWTFDKESNSVEVNV-KSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGN-SLGEVSGHSQ 161 (615)
T ss_dssp TTSEEEEEEEEEEGGGTEEEEEE-EEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCC-EEEECCSCSS
T ss_pred CCCEEEEEeCCCCcccccccccc-cchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCC-cceeeecCCc
Confidence 9999999999633 1121 22223588999999999 8899999988 6888888 332 4455556665
Q ss_pred cceEEEEeCC-CC-EEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCccc---CeEEEEEcCC-CCeEEEEEecCC
Q 019258 158 VGFNCVKWAS-PT-EFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG---MIHSVDIHPS-RKHTCLAGGSSG 231 (343)
Q Consensus 158 ~~v~~~~~~~-~~-~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~v~~~p~-~~~~~~sg~~dg 231 (343)
.|.+++|+| +. .+++++.|+.|++||++. .+.+..+..+. . .|.+++|+|+ +. ++++|+.||
T Consensus 162 -~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~-~l~~~~~dg 229 (615)
T 1pgu_A 162 -RINACHLKQSRPMRSMTVGDDGSVVFYQGPP---FKFSASDRTHH-------KQGSFVRDVEFSPDSGE-FVITVGSDR 229 (615)
T ss_dssp -CEEEEEECSSSSCEEEEEETTTEEEEEETTT---BEEEEEECSSS-------CTTCCEEEEEECSTTCC-EEEEEETTC
T ss_pred -cEEEEEECCCCCcEEEEEeCCCcEEEEeCCC---cceeeeecccC-------CCCceEEEEEECCCCCC-EEEEEeCCC
Confidence 899999999 44 899999999999999988 67777777655 5 7999999998 65 568999999
Q ss_pred cEEEEEccCCceeeeeecCCCCcccccC---CccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-ccc
Q 019258 232 TVFAWDLRWQQQSIVLSGVGTGEAVTHS---LSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFE 307 (343)
Q Consensus 232 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~ 307 (343)
.|++||+++++....+. . .|...|.+++|+ ++. .+++++.||.|++|+.... ...
T Consensus 230 ~i~vwd~~~~~~~~~~~----------~~~~~~~~~v~~~~~~-~~~----------~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 230 KISCFDGKSGEFLKYIE----------DDQEPVQGGIFALSWL-DSQ----------KFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp CEEEEETTTCCEEEECC----------BTTBCCCSCEEEEEES-SSS----------EEEEEETTSEEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEeEEec----------ccccccCCceEEEEEc-CCC----------EEEEEcCCCcEEEEECCCCcEEE
Confidence 99999998866555442 2 689999999999 665 7999999999999997533 222
Q ss_pred cccc-----ccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 308 LLAE-----PCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 308 ~~~~-----~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.+.. ...+.++.+. ++.++++++.++.|++|+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 289 KWTLDKQQLGNQQVGVVAT--GNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp EEECCTTCGGGCEEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred EEcCCCCcccCceeEEEeC--CCCeEEEEECCCCEEEEEC
Confidence 2221 2456677765 3589999999999999974
No 100
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.4e-29 Score=243.55 Aligned_cols=250 Identities=13% Similarity=0.208 Sum_probs=193.3
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-C--CCeEEEEcCCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-H--QSLVAASTLSG 92 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~--~~~l~~~s~dg 92 (343)
.|...|.+++|+| ++++|++|+.|+. |++|++.............|.+.|.+++|+ + +++|++|+.||
T Consensus 7 gH~~~V~~l~~s~----dg~~latg~~dg~-----I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 7 AHNELIHDAVLDY----YGKRLATCSSDKT-----IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp -CCCCEEEECCCS----SSCCEEEEETTTE-----EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred cCcceeEEEEECC----CCCeEEEEECCCc-----EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 5888999999999 8899999999975 779998532222122334688999999998 5 88999999999
Q ss_pred cEEEEEccCceeeeeeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCce-EEEEEcCCCccceEEEEeCC
Q 019258 93 SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGE-FKRVYDGNGLVGFNCVKWAS 167 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~-~~~~~~~~~~~~v~~~~~~~ 167 (343)
.|++|++...+...... ...|..+|+++.|+ +..+++++.||.|++||++++.. .......+.. .|.+++|+|
T Consensus 78 ~I~vwd~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~-~v~~l~~~p 155 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAV-HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAP 155 (753)
T ss_dssp CEEEEEEETTEEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS-CEEEEEECC
T ss_pred eEEEEECCCCccccccc-ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC-ceEEEEecC
Confidence 99999998654222222 23689999999998 57899999999999999987521 2223344544 799999998
Q ss_pred --------------CCEEEEEeCCCcEEEEEccccCCCCC----eeEEecccCCCCCcccCeEEEEEcCCC--CeEEEEE
Q 019258 168 --------------PTEFVTGGFGYGLQWWDLRRAGSGGP----VLQFKGNFGSQGKASGMIHSVDIHPSR--KHTCLAG 227 (343)
Q Consensus 168 --------------~~~l~t~~~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~v~~~p~~--~~~~~sg 227 (343)
+..+++++.||.|++||++. +.. ...+..|. ++|.+++|+|++ ..++++|
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~---~~~~~~~~~~~~~h~-------~~V~~l~~sp~~~~~~~l~s~ 225 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS---DAQTYVLESTLEGHS-------DWVRDVAWSPTVLLRSYLASV 225 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEET---TTTEEEEEEEECCCS-------SCEEEEEECCCCSSSEEEEEE
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccC---CcccceeeeeecCCC-------CcEEEEEeccCCCCCCEEEEE
Confidence 57899999999999999998 432 23344443 789999999994 4678899
Q ss_pred ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
+.||.|++||++....+..... .....|...|++++|+|++. .+++++.||.|++|+..
T Consensus 226 s~Dg~I~iwd~~~~~~~~~~~~------~~~~~~~~~v~~l~~spdg~----------~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 226 SQDRTCIIWTQDNEQGPWKKTL------LKEEKFPDVLWRASWSLSGN----------VLALSGGDNKVTLWKEN 284 (753)
T ss_dssp ESSSCEEEEEESSSSSCCBCCB------SSSSCCSSCCCCEEECTTTC----------CEEEECSSSCEECCBCC
T ss_pred ecCCEEEEecCCCCCCcceeEE------eccCCCCCceEEEEEcCCCC----------EEEEEcCCCEEEEEecC
Confidence 9999999999988543221110 01145888999999999987 79999999999999865
No 101
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.5e-28 Score=239.40 Aligned_cols=300 Identities=12% Similarity=0.087 Sum_probs=211.7
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcC
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTL 90 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~ 90 (343)
.+.++.|...|.+|+|+| ++++||+|+.|+. |++|+... .++...+.|...|.+++|+.+.+|++++.
T Consensus 10 ~~~~~gh~~~V~~lafsp----dg~~lAsgs~Dg~-----I~lw~~~~---~~~~~~~~~~~~V~~l~fspg~~L~S~s~ 77 (902)
T 2oaj_A 10 ETNKYGMSSKPIAAAFDF----TQNLLAIATVTGE-----VHIYGQQQ---VEVVIKLEDRSAIKEMRFVKGIYLVVINA 77 (902)
T ss_dssp EEEEEECSSCEEEEEEET----TTTEEEEEETTSE-----EEEECSTT---CEEEEECSSCCCEEEEEEETTTEEEEEET
T ss_pred cccccCCCCCcEEEEECC----CCCEEEEEeCCCE-----EEEEeCCC---cEEEEEcCCCCCEEEEEEcCCCEEEEEEC
Confidence 455667889999999999 8999999999975 77999854 22344456788999999997668999999
Q ss_pred CCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEE----------EEcCCCcc
Q 019258 91 SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKR----------VYDGNGLV 158 (343)
Q Consensus 91 dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~----------~~~~~~~~ 158 (343)
|++|++||+...+.+... .|.+.|+++.|+ ++++++|+.||+|++||++++..... ....|..
T Consensus 78 D~~v~lWd~~~~~~~~~~----~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~- 152 (902)
T 2oaj_A 78 KDTVYVLSLYSQKVLTTV----FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS- 152 (902)
T ss_dssp TCEEEEEETTTCSEEEEE----ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC-
T ss_pred cCeEEEEECCCCcEEEEE----cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCC-
Confidence 999999999866555433 266789999998 89999999999999999998742211 1123444
Q ss_pred ceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCC-----------CCCcccCeEEEEEcCCCCeEEE
Q 019258 159 GFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGS-----------QGKASGMIHSVDIHPSRKHTCL 225 (343)
Q Consensus 159 ~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----------~~~~~~~i~~v~~~p~~~~~~~ 225 (343)
.|.+++|+| ...+++++.|+.| +||++. ++++..+..+... ...+...|.+++|+|++. +|+
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~la 227 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVE---NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HII 227 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSCEE-EEETTT---TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEE
T ss_pred CeEEEEEccCCCCEEEEEeCCCcE-EEECCC---CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEE
Confidence 799999999 3689999999999 999998 6666666644100 011226799999999976 568
Q ss_pred EEecCCcEEEEEccCCceeee--eec--CCCC-cccccC--CccccEEEEEEeecC----CCCcCCCCCccceEEEecC-
Q 019258 226 AGGSSGTVFAWDLRWQQQSIV--LSG--VGTG-EAVTHS--LSESEVWEVQYDCHT----KSSNISSSRVLPAMFCSED- 293 (343)
Q Consensus 226 sg~~dg~v~iwd~~~~~~~~~--~~~--~~~~-~~~~~~--~h~~~v~~v~~~p~~----~~~~~~~~~~~~l~s~s~d- 293 (343)
+|+.||+|++||+++++.... +.. .+.. ...... .|...|++++|++.. .. .+++++.|
T Consensus 228 sgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~---------ll~sg~~~~ 298 (902)
T 2oaj_A 228 TIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTS---------LLISHKSIS 298 (902)
T ss_dssp EEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEE---------EEEEEECST
T ss_pred EEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCE---------EEEeCCCCC
Confidence 999999999999988543322 100 0000 000000 245689999997642 23 56777666
Q ss_pred ----CeEEEEecCC-------------------Ccccccc--cccccceeeecC---------CCCCeeEEccCCceEEE
Q 019258 294 ----GILAVVEQGE-------------------EPFELLA--EPCAINSFDIDP---------QNPSDVICSLEWESIAI 339 (343)
Q Consensus 294 ----g~i~~~~~~~-------------------~~~~~~~--~~~~i~s~~~~~---------~~~~~l~~~~~~~~i~~ 339 (343)
..+++|+... .....+. ....+.++.+.+ .++..+++++.++.|++
T Consensus 299 ~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~ 378 (902)
T 2oaj_A 299 RGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIET 378 (902)
T ss_dssp TSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEE
T ss_pred CCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEE
Confidence 3788887321 0111111 234556666543 13357888888999999
Q ss_pred Ee
Q 019258 340 VS 341 (343)
Q Consensus 340 ~~ 341 (343)
|+
T Consensus 379 ~~ 380 (902)
T 2oaj_A 379 ML 380 (902)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 102
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.5e-27 Score=209.80 Aligned_cols=238 Identities=15% Similarity=0.146 Sum_probs=189.5
Q ss_pred CccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEE
Q 019258 65 HSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVS 141 (343)
Q Consensus 65 ~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd 141 (343)
.....|.+.|++++|+ ++.+|++++.||.|++|++...+.+... ..|.+.|.+++|+ ++.+++++.||.|++||
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL---DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh---hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 3345789999999999 8899999999999999999866555443 3689999999998 88999999999999999
Q ss_pred CCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCC-----CcEEEEEccccCCC--------CCeeEEecccCCCCCc
Q 019258 142 VIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFG-----YGLQWWDLRRAGSG--------GPVLQFKGNFGSQGKA 207 (343)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d-----~~i~iwd~~~~~~~--------~~~~~~~~~~~~~~~~ 207 (343)
+.+++ ....+. +.. .+.+++|+| +..+++++.+ +.|++||++..... .++..+..+. .
T Consensus 103 ~~~~~-~~~~~~-~~~-~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 174 (369)
T 3zwl_B 103 VSNGQ-CVATWK-SPV-PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE-----G 174 (369)
T ss_dssp TTTCC-EEEEEE-CSS-CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT-----T
T ss_pred CCCCc-EEEEee-cCC-CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc-----C
Confidence 99985 444444 333 699999999 8889999988 99999999881111 1222233222 0
Q ss_pred ccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccce
Q 019258 208 SGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPA 287 (343)
Q Consensus 208 ~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l 287 (343)
...+.+++|+|++. .+++|+.||.|++||++....+.... ..|...|.+++|+|++. .|
T Consensus 175 ~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~----------~l 233 (369)
T 3zwl_B 175 LDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSI----------DLHEKSISDMQFSPDLT----------YF 233 (369)
T ss_dssp CCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEE----------ECCSSCEEEEEECTTSS----------EE
T ss_pred ccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEE----------ecCCCceeEEEECCCCC----------EE
Confidence 02799999999876 56789999999999999855555555 56889999999999877 79
Q ss_pred EEEecCCeEEEEecCCC-cccccccccccceeeecCCCCCeeEEccCCc
Q 019258 288 MFCSEDGILAVVEQGEE-PFELLAEPCAINSFDIDPQNPSDVICSLEWE 335 (343)
Q Consensus 288 ~s~s~dg~i~~~~~~~~-~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~ 335 (343)
++++.||.|++|+.... ....+....++.++.++| ++.++++++.++
T Consensus 234 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~ 281 (369)
T 3zwl_B 234 ITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITP-LKEFIILGGGQE 281 (369)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECS-SSSEEEEEECCC
T ss_pred EEecCCceEEEEECCCCceeeeecCCCCceeEEecC-CCceEEEeecCC
Confidence 99999999999997543 334444567899999999 568999988877
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1e-27 Score=220.83 Aligned_cols=254 Identities=13% Similarity=0.223 Sum_probs=188.3
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLH 95 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~ 95 (343)
.|...|.+++| ++++|++|+.|+. |++|++...... .....|.+.|.+++|+ ++.|++|+.||.|+
T Consensus 171 ~h~~~v~~l~~------~~~~l~sg~~dg~-----i~vwd~~~~~~~--~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~ 236 (435)
T 1p22_A 171 GHTGSVLCLQY------DERVIITGSSDST-----VRVWDVNTGEML--NTLIHHCEAVLHLRFN-NGMMVTCSKDRSIA 236 (435)
T ss_dssp CCSSCEEEEEC------CSSEEEEEETTSC-----EEEEESSSCCEE--EEECCCCSCEEEEECC-TTEEEEEETTSCEE
T ss_pred CCCCcEEEEEE------CCCEEEEEcCCCe-----EEEEECCCCcEE--EEEcCCCCcEEEEEEc-CCEEEEeeCCCcEE
Confidence 47788999988 3568999999975 779999653221 2223578899999997 67999999999999
Q ss_pred EEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEe
Q 019258 96 VLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGG 175 (343)
Q Consensus 96 v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~ 175 (343)
+||+..............|...|.++.+.++.+++++.||.|++||+++++ ....+..|.. .+.++.+. +..+++++
T Consensus 237 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~-~v~~~~~~-~~~l~~g~ 313 (435)
T 1p22_A 237 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHKR-GIACLQYR-DRLVVSGS 313 (435)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCC-EEEEEECCSS-CEEEEEEE-TTEEEEEE
T ss_pred EEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCc-EEEEEcCCCC-cEEEEEeC-CCEEEEEe
Confidence 999986554433333447999999999999999999999999999999985 5555556655 79999985 57899999
Q ss_pred CCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCce--------eeee
Q 019258 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ--------SIVL 247 (343)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~--------~~~~ 247 (343)
.|+.|++||+++ ++++..+..+. ..|.++++++ ..+++|+.||.|++||++.... ....
T Consensus 314 ~dg~i~iwd~~~---~~~~~~~~~h~-------~~v~~~~~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 380 (435)
T 1p22_A 314 SDNTIRLWDIEC---GACLRVLEGHE-------ELVRCIRFDN---KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 380 (435)
T ss_dssp TTSCEEEEETTT---CCEEEEECCCS-------SCEEEEECCS---SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEE
T ss_pred CCCeEEEEECCC---CCEEEEEeCCc-------CcEEEEEecC---CEEEEEeCCCcEEEEECCCCCCccccccchheee
Confidence 999999999998 78888887665 7899999943 4678999999999999976442 2333
Q ss_pred ecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc-cccccccccceeeec
Q 019258 248 SGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF-ELLAEPCAINSFDID 321 (343)
Q Consensus 248 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~-~~~~~~~~i~s~~~~ 321 (343)
. ..|.+.|.+++| ++. .|++++.||+|++|+...... .......+..++.+.
T Consensus 381 ~----------~~h~~~v~~l~~--~~~----------~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 433 (435)
T 1p22_A 381 L----------VEHSGRVFRLQF--DEF----------QIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYI 433 (435)
T ss_dssp E----------CCCSSCCCCEEE--CSS----------CEEECCSSSEEEEEC----------------------
T ss_pred c----------cCCCCCeEEEEe--CCC----------EEEEEeCCCEEEEEECCCCCCcccCCCCCCccceeee
Confidence 3 578999999999 334 799999999999999754432 222223455555543
No 104
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.9e-28 Score=219.53 Aligned_cols=244 Identities=10% Similarity=0.120 Sum_probs=173.3
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCC------CCCceeeeeCCCCCC-C------CCCccCCCCCCeeEEEcc-CC
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDA------DSPSLETHSISLPAS-L------TPHSQWTPPTRISSLSTS-HQ 82 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~------~~~~l~~w~~~~~~~-~------~~~~~~~~~~~v~~v~~~-~~ 82 (343)
+.+.|.++++.+ +.+++|..++.. ..-.+++|++..... . .......+...+.+++|+ ++
T Consensus 72 ~~~~v~s~~~~~------~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 72 NDDSPTAIDASK------GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp TSCCCCEEEEET------TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred CCCceEEEEeCC------CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 344555665544 456666543310 012377888743221 1 111222344568899999 88
Q ss_pred CeEEEEc--CCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEc-CCCc
Q 019258 83 SLVAAST--LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYD-GNGL 157 (343)
Q Consensus 83 ~~l~~~s--~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~-~~~~ 157 (343)
.+|++++ .|++|+|||+...+.+... .|.+.|.+++|+ ++.+++++.++ +.+|+..++........ .|..
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~----~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEI----ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEE----ECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEe----CCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCC
Confidence 8876554 6899999999876655443 377889999998 78888888555 66666666544444333 3444
Q ss_pred cceEEEEeCC-CCEEEEEeCCC----cEEEEEccccCCCCC-e---eEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe
Q 019258 158 VGFNCVKWAS-PTEFVTGGFGY----GLQWWDLRRAGSGGP-V---LQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228 (343)
Q Consensus 158 ~~v~~~~~~~-~~~l~t~~~d~----~i~iwd~~~~~~~~~-~---~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~ 228 (343)
.+.+++|+| +..+++++.|+ .+++||+.. ... . ..+..+. .+|++++|+|++. +||+|+
T Consensus 221 -~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~-------~~V~~~~~Spdg~-~lasgs 288 (365)
T 4h5i_A 221 -SLSKINFIADDTVLIAASLKKGKGIVLTKISIKS---GNTSVLRSKQVTNRF-------KGITSMDVDMKGE-LAVLAS 288 (365)
T ss_dssp -EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET---TEEEEEEEEEEESSC-------SCEEEEEECTTSC-EEEEEE
T ss_pred -CEEEEEEcCCCCEEEEEecCCcceeEEeeccccc---ceecceeeeeecCCC-------CCeEeEEECCCCC-ceEEEc
Confidence 799999999 77888888887 688899876 222 1 2233333 7799999999986 578999
Q ss_pred cCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 229 SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 229 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
.|++|++||+++++....+. .+|...|++|+|+|++. +|+|||.|++|++|+...
T Consensus 289 ~D~~V~iwd~~~~~~~~~~~----------~gH~~~V~~v~fSpdg~----------~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 289 NDNSIALVKLKDLSMSKIFK----------QAHSFAITEVTISPDST----------YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEETTTTEEEEEET----------TSSSSCEEEEEECTTSC----------EEEEEETTSEEEEEECCT
T ss_pred CCCEEEEEECCCCcEEEEec----------CcccCCEEEEEECCCCC----------EEEEEeCCCeEEEEEcCC
Confidence 99999999999866555555 68999999999999988 899999999999999754
No 105
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=3.8e-28 Score=220.86 Aligned_cols=304 Identities=13% Similarity=0.087 Sum_probs=185.1
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC-------CCCccCCCCCCeeEEEc----
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL-------TPHSQWTPPTRISSLST---- 79 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~-------~~~~~~~~~~~v~~v~~---- 79 (343)
.-+.+|.......++|.........+++.| .|+. +.+|....+... ..+..+.+...+..+.|
T Consensus 8 ~~~~lpl~~~p~~~~w~~~~~~~~~l~a~g-~~~~-----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (393)
T 4gq1_A 8 NQYQLPLNVRPYTTTWCSQSPSCSNLLAIG-HDTG-----ITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSC 81 (393)
T ss_dssp EEEECCTTCCEEEEEECTTSGGGTTEEEEE-ESSE-----EEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTC
T ss_pred CceEecCCCCCeEEEEeCCCCCCCCEEEEE-CCCC-----EEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCc
Confidence 445667777888999976432334555555 4543 567766322110 11111222333333332
Q ss_pred ----------------c-CCCeEEEEcCCCcEEEEEccCceee--eeeccCCccccCeEEEEec----------CCEEEE
Q 019258 80 ----------------S-HQSLVAASTLSGSLHVLSSAMQVLL--SVDENSGFHVGPISGVDLT----------GSECVS 130 (343)
Q Consensus 80 ----------------~-~~~~l~~~s~dg~v~v~~~~~~~~~--~~~~~~~~h~~~v~~~~~~----------~~~~~s 130 (343)
. +..+|++++.|++|+||+....+.. .......+|.+.|++++|+ ++.|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las 161 (393)
T 4gq1_A 82 SYSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIAS 161 (393)
T ss_dssp EEECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEE
T ss_pred cccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEE
Confidence 2 4457999999999999999855433 2334456899999999995 568999
Q ss_pred EeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccC------
Q 019258 131 VGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFG------ 202 (343)
Q Consensus 131 ~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------ 202 (343)
+|.|++|++||+.++......+..+ . .+.+++|+| ...|++++.|++|++||++. ++.......+..
T Consensus 162 ~s~D~tv~~Wd~~~~~~~~~~~~~~-~-~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t---~~~~~~~~~~~~~~~~~~ 236 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPILAGYPLS-S-PGISVQFRPSNPNQLIVGERNGNIRIFDWTL---NLSAEENSQTELVKNPWL 236 (393)
T ss_dssp EETTSEEEEEEEETTEEEEEEEECS-S-CEEEEEEETTEEEEEEEEETTSEEEEEETTC---CC----------CSCCCS
T ss_pred EECCCeEEEEECCCCceeeeecCCC-C-CcEEEEECCCCCceEEecCCCCEEEEEECCC---CcccccccccCCcccceE
Confidence 9999999999998875555555444 4 699999999 35799999999999999987 333222111000
Q ss_pred ------------CCCCcccCeEEEEEc-CCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEE
Q 019258 203 ------------SQGKASGMIHSVDIH-PSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQ 269 (343)
Q Consensus 203 ------------~~~~~~~~i~~v~~~-p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 269 (343)
....+...+.++.|. |++. .+++++.|+++++||++.......+. .|...+..+.
T Consensus 237 ~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~-----------~~~~~~~~~~ 304 (393)
T 4gq1_A 237 LTLNTLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEIS-----------DSTMKLGPKN 304 (393)
T ss_dssp EEEESGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC------------------------------C
T ss_pred EecccccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEe-----------eecCccccEE
Confidence 001122668889987 5654 56899999999999998754332221 2333333333
Q ss_pred EeecCCCC-----------cCCCCCccceEEEecCCeEEEEecCCC--cccccccccccceeeecCCCCCeeEEccCCce
Q 019258 270 YDCHTKSS-----------NISSSRVLPAMFCSEDGILAVVEQGEE--PFELLAEPCAINSFDIDPQNPSDVICSLEWES 336 (343)
Q Consensus 270 ~~p~~~~~-----------~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~ 336 (343)
+.|+.... ....+.. ++++++.||+|++|+.... .........+|.+++|+| +|++|+++++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafsp-dG~~LA~as~~G- 381 (393)
T 4gq1_A 305 LLPNVQGISLFPSLLGACPHPRYMDY-FATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQ-DGSHLAIATEGS- 381 (393)
T ss_dssp CSCSEEEECSSCCSSCCEECSSCTTE-EEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECT-TSSEEEEEESSE-
T ss_pred EccccccccccCcceeEEEccCCCCE-EEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcC-CCCEEEEEeCCC-
Confidence 32221100 0000111 5678899999999997533 334444567999999999 689999998765
Q ss_pred EEEE
Q 019258 337 IAIV 340 (343)
Q Consensus 337 i~~~ 340 (343)
+.+|
T Consensus 382 v~lv 385 (393)
T 4gq1_A 382 VLLT 385 (393)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4444
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=1.4e-27 Score=216.82 Aligned_cols=283 Identities=15% Similarity=0.099 Sum_probs=183.7
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc----CCCeEEEEcCCC
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS----HQSLVAASTLSG 92 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~----~~~~l~~~s~dg 92 (343)
|...|.+++|+| .++.+|++++.|+. |++|++.. ..+...+.+...+.++.|. ++.++++++.||
T Consensus 98 ~~~~v~~~~~~~---~~~~~l~s~~~d~~-----i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 98 HRYSVETVQWYP---HDTGMFTSSSFDKT-----LKVWDTNT---LQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp CSSCEEEEEECT---TCTTCEEEEETTSE-----EEEEETTT---TEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred CCCcEEEEEEcc---CCCcEEEEEeCCCe-----EEEeeCCC---CccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 888999999999 46779999999865 77999965 3334455678889999998 344899999999
Q ss_pred cEEEEEccCceeeeeeccCCccccCeEEEEec--CC-EEEEEeCCCcEEEEECCCCceEEEEE---------------cC
Q 019258 93 SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GS-ECVSVGEDGRVNLVSVIGGGEFKRVY---------------DG 154 (343)
Q Consensus 93 ~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~-~~~s~s~dg~v~~wd~~~~~~~~~~~---------------~~ 154 (343)
.|++|++...+.+... ..|.++|.++.|+ +. .+++++.||.|++||+++.......+ ..
T Consensus 167 ~v~~~d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (408)
T 4a11_B 167 KVQLCDLKSGSCSHIL---QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA 243 (408)
T ss_dssp SEEEEESSSSCCCEEE---CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS
T ss_pred eEEEEeCCCcceeeee---cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccc
Confidence 9999999865544333 2588999999999 55 58999999999999998764333333 23
Q ss_pred CCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcE
Q 019258 155 NGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTV 233 (343)
Q Consensus 155 ~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v 233 (343)
+.. .|.+++|+| +..+++++.|+.|++||++. ++....+......... ......+...+ ...+++++.|+.|
T Consensus 244 ~~~-~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~i 316 (408)
T 4a11_B 244 HNG-KVNGLCFTSDGLHLLTVGTDNRMRLWNSSN---GENTLVNYGKVCNNSK-KGLKFTVSCGC--SSEFVFVPYGSTI 316 (408)
T ss_dssp CSS-CEEEEEECTTSSEEEEEETTSCEEEEETTT---CCBCCCCCCCCCCCCS-SCCCCEECCSS--SSCEEEEEETTEE
T ss_pred ccC-ceeEEEEcCCCCEEEEecCCCeEEEEECCC---Cccceecccccccccc-ccceeEEecCC--CceEEEEecCCEE
Confidence 443 799999999 88999999999999999988 5544333222110100 01122222222 2345677889999
Q ss_pred EEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-ccccccc
Q 019258 234 FAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLAEP 312 (343)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~~~ 312 (343)
++||+++.+.. ..+ .+|...|.+++|+|++. +|++++.||.|++|+..... .......
T Consensus 317 ~v~d~~~~~~~-~~~----------~~~~~~v~~~~~s~~~~----------~l~s~~~dg~i~iw~~~~~~~~~~~~~~ 375 (408)
T 4a11_B 317 AVYTVYSGEQI-TML----------KGHYKTVDCCVFQSNFQ----------ELYSGSRDCNILAWVPSLYEPVPDDDET 375 (408)
T ss_dssp EEEETTTCCEE-EEE----------CCCSSCEEEEEEETTTT----------EEEEEETTSCEEEEEECC----------
T ss_pred EEEECcCCcce-eee----------ccCCCeEEEEEEcCCCC----------EEEEECCCCeEEEEeCCCCCccCCCCce
Confidence 99999885544 444 57899999999999987 79999999999999975432 1111111
Q ss_pred cccceeeecCCCCCeeEEccCCceEEEEeCC
Q 019258 313 CAINSFDIDPQNPSDVICSLEWESIAIVSRP 343 (343)
Q Consensus 313 ~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~~ 343 (343)
..... +.+.........++++.+.+|..|
T Consensus 376 ~~~~~--~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 376 TTKSQ--LNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp -------------------------------
T ss_pred Eeccc--cccccceeecccCccCceeecCCc
Confidence 12222 222222445556677899999865
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.9e-28 Score=215.01 Aligned_cols=264 Identities=11% Similarity=0.018 Sum_probs=183.9
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEEEEEccCceee------e
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLL------S 106 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~------~ 106 (343)
++.++++|+.|+. |++|++..... +..+. .+.|.++.|+.. +++++.|++|++|+......+ .
T Consensus 47 d~~~l~sg~~Dg~-----v~iwd~~~~~~---~~~~~-~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 47 DKWVCMCRCEDGA-----LHFTQLKDSKT---ITTIT-TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEEEETTE-----EEEEEESSSSC---EEEEE-EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred CCCEEEEECCCCc-----EEEEECCCCcE---EEEEe-cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 6789999999975 77999965322 22222 456777777733 999999999999987632110 0
Q ss_pred -eeccCCccccCeEEEEec----CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcE
Q 019258 107 -VDENSGFHVGPISGVDLT----GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGL 180 (343)
Q Consensus 107 -~~~~~~~h~~~v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i 180 (343)
+......|.++|.++.++ ++.+++++.||+|++||+++++ .......+....+.+++|+| +..+++|+.|+.|
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-QYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-EEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-EEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 111222467899999996 6789999999999999999985 44444333333699999999 8889999999999
Q ss_pred EEEEccccCCCCCe-eEEec-ccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCccccc
Q 019258 181 QWWDLRRAGSGGPV-LQFKG-NFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTH 258 (343)
Q Consensus 181 ~iwd~~~~~~~~~~-~~~~~-~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 258 (343)
++||++. ++.+ ..+.. |. ++|.+++|+|++.. +++|+ |+.|++||+++......+.. .
T Consensus 195 ~iwd~~~---~~~~~~~~~~~h~-------~~v~~l~fs~~g~~-l~s~~-~~~v~iwd~~~~~~~~~~~~--------~ 254 (343)
T 3lrv_A 195 DVYNLSS---PDQASSRFPVDEE-------AKIKEVKFADNGYW-MVVEC-DQTVVCFDLRKDVGTLAYPT--------Y 254 (343)
T ss_dssp EEEESSC---TTSCCEECCCCTT-------SCEEEEEECTTSSE-EEEEE-SSBEEEEETTSSTTCBSSCC--------C
T ss_pred EEEECCC---CCCCccEEeccCC-------CCEEEEEEeCCCCE-EEEEe-CCeEEEEEcCCCCcceeecc--------c
Confidence 9999998 6665 56665 44 78999999999864 56777 45999999998654433220 0
Q ss_pred CCccccEE--EEEEeecCCCCcCCCCCccceEEEec-CCeEEEEecCCCcccccccccccceeeecC--CCCCeeEEccC
Q 019258 259 SLSESEVW--EVQYDCHTKSSNISSSRVLPAMFCSE-DGILAVVEQGEEPFELLAEPCAINSFDIDP--QNPSDVICSLE 333 (343)
Q Consensus 259 ~~h~~~v~--~v~~~p~~~~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~~i~s~~~~~--~~~~~l~~~~~ 333 (343)
..|...+. +++|+|++. +|++++. |+.|++|+.......... .++..+.+.+ .+...+++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~g~----------~l~~~s~~d~~i~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~ 322 (343)
T 3lrv_A 255 TIPEFKTGTVTYDIDDSGK----------NMIAYSNESNSLTIYKFDKKTKNWTK--DEESALCLQSDTADFTDMDVVCG 322 (343)
T ss_dssp BC-----CCEEEEECTTSS----------EEEEEETTTTEEEEEEECTTTCSEEE--EEEEECCC----CCCCEEEEEEE
T ss_pred ccccccccceEEEECCCCC----------EEEEecCCCCcEEEEEEcccccceEe--cCceeEecCccccccceeEEEec
Confidence 12334443 699999987 7888888 999999987433211111 3455555554 23467777777
Q ss_pred CceEEEE
Q 019258 334 WESIAIV 340 (343)
Q Consensus 334 ~~~i~~~ 340 (343)
++.+.++
T Consensus 323 d~~~~~~ 329 (343)
T 3lrv_A 323 DGGIAAI 329 (343)
T ss_dssp TTEEEEE
T ss_pred CCceEEE
Confidence 7777654
No 108
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-28 Score=224.56 Aligned_cols=263 Identities=11% Similarity=0.106 Sum_probs=190.1
Q ss_pred cccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCC--------CCccC---C--CCCCeeEEE
Q 019258 12 VHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLT--------PHSQW---T--PPTRISSLS 78 (343)
Q Consensus 12 ~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~--------~~~~~---~--~~~~v~~v~ 78 (343)
...+.|...|.+|+|+| ++++|++|+.|+. |++|++....... ++..+ + +...+.++.
T Consensus 105 ~~~~~h~~~v~~~~~~~----~~~~l~s~s~dg~-----i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 175 (437)
T 3gre_A 105 SLTYDCSSTVTQITMIP----NFDAFAVSSKDGQ-----IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMR 175 (437)
T ss_dssp SEEEECSSCEEEEEECT----TSSEEEEEETTSE-----EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEE
T ss_pred eeeccCCCCEEEEEEeC----CCCEEEEEeCCCE-----EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEE
Confidence 33446889999999999 8899999999975 7799984110010 11111 1 566778887
Q ss_pred cc---CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEc
Q 019258 79 TS---HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYD 153 (343)
Q Consensus 79 ~~---~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~ 153 (343)
+. ++.+|++++.||.|++||+...+.+...... .|.+.|++++|+ +..+++++.||+|++||+++++ +...+.
T Consensus 176 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~ 253 (437)
T 3gre_A 176 AFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS-PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNV-LIRSWS 253 (437)
T ss_dssp EEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC-GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTE-EEEEEB
T ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC-CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCcc-EEEEEe
Confidence 54 6789999999999999999876655444321 388999999998 8899999999999999999985 555443
Q ss_pred -CCCccceEEEEeCC-----CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCC-------------------CCcc
Q 019258 154 -GNGLVGFNCVKWAS-----PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQ-------------------GKAS 208 (343)
Q Consensus 154 -~~~~~~v~~~~~~~-----~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-------------------~~~~ 208 (343)
.+.. .|.+++|+| +..+++++.|+.|++||++. ++.+..+..+.... ..+.
T Consensus 254 ~~~~~-~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 329 (437)
T 3gre_A 254 FGDHA-PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK---GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSL 329 (437)
T ss_dssp CTTCE-EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT---TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSG
T ss_pred cCCCC-ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC---CcEEEEEEcCCCCCccceecccccccccceecccccC
Confidence 4544 799997765 34799999999999999988 66666666442100 0133
Q ss_pred cCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCC--------------------------CcccccCCcc
Q 019258 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGT--------------------------GEAVTHSLSE 262 (343)
Q Consensus 209 ~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~--------------------------~~~~~~~~h~ 262 (343)
..|.+++|+ ++ .++++|+.||.|++||+++++....+.+... ........|.
T Consensus 330 ~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 407 (437)
T 3gre_A 330 NALSTISVS-ND-KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHH 407 (437)
T ss_dssp GGGCCEEEE-TT-EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------C
T ss_pred CceEEEEEC-Cc-eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccc
Confidence 679999999 44 5778999999999999988665544432100 0000012389
Q ss_pred ccEEEEEEeec-CCCCcCCCCCccceEEEecCCeEEEEe
Q 019258 263 SEVWEVQYDCH-TKSSNISSSRVLPAMFCSEDGILAVVE 300 (343)
Q Consensus 263 ~~v~~v~~~p~-~~~~~~~~~~~~~l~s~s~dg~i~~~~ 300 (343)
..|++++|+++ +.. .|++++.||.|++|+
T Consensus 408 ~~I~~i~~~~~~~~~---------~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 408 DIINSISTCEVDETP---------LLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCEEEEEEEESSSSE---------EEEEEETTSCEEEEC
T ss_pred cceeeEeeeccCCce---------EEEEEcCCceEEEeC
Confidence 99999999998 233 799999999999995
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=8.1e-28 Score=213.55 Aligned_cols=240 Identities=17% Similarity=0.119 Sum_probs=186.2
Q ss_pred CCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CC-EEEEEeCCCcEEEEEC-C
Q 019258 69 TPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GS-ECVSVGEDGRVNLVSV-I 143 (343)
Q Consensus 69 ~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~-~~~s~s~dg~v~~wd~-~ 143 (343)
.|.+.|.+++|+ ++.+|++++.||.|++|++..............|...|.++.|+ +. .+++++.||.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 688999999999 88999999999999999998544111111112688999999998 78 8999999999999999 8
Q ss_pred CCceEEEEEcC--CCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCC------CCCeeEEecccCCCCCcccCeEEEE
Q 019258 144 GGGEFKRVYDG--NGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGS------GGPVLQFKGNFGSQGKASGMIHSVD 215 (343)
Q Consensus 144 ~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~v~ 215 (343)
++. . ..+.. |.. .|.+++|++.+.+++++.|+.|++||++.... .+++..+. +. ..+.+++
T Consensus 89 ~~~-~-~~~~~~~~~~-~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~-------~~v~~~~ 157 (342)
T 1yfq_A 89 SPS-F-QALTNNEANL-GICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VK-------NKIFTMD 157 (342)
T ss_dssp SSS-E-EECBSCCCCS-CEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SC-------CCEEEEE
T ss_pred CCc-e-EeccccCCCC-ceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eC-------CceEEEE
Confidence 774 4 34444 555 79999999988999999999999999975100 12222222 22 7799999
Q ss_pred EcCCCCeEEEEEecCCcEEEEEccC-CceeeeeecCCCCcccccCCccccEEEEEEee-cCCCCcCCCCCccceEEEecC
Q 019258 216 IHPSRKHTCLAGGSSGTVFAWDLRW-QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDC-HTKSSNISSSRVLPAMFCSED 293 (343)
Q Consensus 216 ~~p~~~~~~~sg~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~~~~~~~~~~l~s~s~d 293 (343)
|+|++ +++++.||.|++||++. ...+..... ..|...|.+++|+| ++. .+++++.|
T Consensus 158 ~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~---------~~~~~~i~~i~~~~~~~~----------~l~~~~~d 215 (342)
T 1yfq_A 158 TNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEE---------SGLKYQIRDVALLPKEQE----------GYACSSID 215 (342)
T ss_dssp ECSSE---EEEEESTTEEEEEESSCCTTCCCEEEE---------CSCSSCEEEEEECSGGGC----------EEEEEETT
T ss_pred ecCCc---EEEEeCCCeEEEEECCccccccceeee---------cCCCCceeEEEECCCCCC----------EEEEEecC
Confidence 99875 67899999999999987 554333221 45788999999999 877 79999999
Q ss_pred CeEEEEecCCC-------c-cccccccc---------ccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 294 GILAVVEQGEE-------P-FELLAEPC---------AINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 294 g~i~~~~~~~~-------~-~~~~~~~~---------~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
|.|++|+.... . ..+..+.. +|+++.++| ++.+|++|+.++.|++|+.
T Consensus 216 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEET
T ss_pred CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcC
Confidence 99999987543 1 12222222 899999999 5799999999999999974
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=1.8e-27 Score=216.78 Aligned_cols=250 Identities=11% Similarity=0.074 Sum_probs=188.2
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC----CCC-ccCCCCCCeeEEEcc-CC-CeEEEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL----TPH-SQWTPPTRISSLSTS-HQ-SLVAAS 88 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~----~~~-~~~~~~~~v~~v~~~-~~-~~l~~~ 88 (343)
.|...|.+++|+| .++++|++|+.|+. |++|++...... .++ ....|...|.+++|+ ++ .+|+++
T Consensus 79 ~h~~~V~~~~~~p---~~~~~l~s~s~dg~-----v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 79 GHTAPVLDIAWCP---HNDNVIASGSEDCT-----VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp CCSSCEEEEEECT---TCTTEEEEEETTSE-----EEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEE
T ss_pred cCCCCEEEEEeCC---CCCCEEEEEeCCCe-----EEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEE
Confidence 4788999999999 46789999999965 779999654211 222 234588999999999 54 699999
Q ss_pred cCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeC
Q 019258 89 TLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166 (343)
Q Consensus 89 s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~ 166 (343)
+.||.|++||+...+.+..... ..|.+.|.+++|+ +..+++++.||.|++||+++++........|....+.++.|+
T Consensus 151 ~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (402)
T 2aq5_A 151 GCDNVILVWDVGTGAAVLTLGP-DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV 229 (402)
T ss_dssp ETTSCEEEEETTTTEEEEEECT-TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC
T ss_pred cCCCEEEEEECCCCCccEEEec-CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc
Confidence 9999999999987665544321 3589999999998 889999999999999999998544443256665358999999
Q ss_pred C-CCEEEEE---eCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCc
Q 019258 167 S-PTEFVTG---GFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ 242 (343)
Q Consensus 167 ~-~~~l~t~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~ 242 (343)
+ +..++++ +.|+.|++||++. ...++....... . ..+.+++|+|++..++++|+.||.|++||++..+
T Consensus 230 ~~~~~l~~g~~~~~d~~i~iwd~~~--~~~~~~~~~~~~--~----~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 230 SEGKILTTGFSRMSERQVALWDTKH--LEEPLSLQELDT--S----SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp STTEEEEEEECTTCCEEEEEEETTB--CSSCSEEEECCC--C----SSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCcEEEEeccCCCCceEEEEcCcc--ccCCceEEeccC--C----CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 9 5566666 5899999999998 223333333211 1 6699999999998877788889999999998865
Q ss_pred eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 243 QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
.....+. ...|...|.+++|+|++. .++ +.|+.+++|+..
T Consensus 302 ~~~~~l~--------~~~~~~~v~~~~~sp~~~----------~~~--s~~~~~~~~~l~ 341 (402)
T 2aq5_A 302 PFLHYLS--------MFSSKESQRGMGYMPKRG----------LEV--NKCEIARFYKLH 341 (402)
T ss_dssp TCEEEEE--------EECCSSCCSEEEECCGGG----------SCG--GGTEEEEEEEEE
T ss_pred cceEeec--------ccccCCcccceEEecccc----------cce--ecceeEEEEEcC
Confidence 3222220 022568999999999876 343 466788888754
No 111
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=4.5e-27 Score=232.51 Aligned_cols=240 Identities=14% Similarity=0.153 Sum_probs=197.3
Q ss_pred CCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCC
Q 019258 68 WTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIG 144 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~ 144 (343)
..|.+.|.+++|+ ++.+|++++.||.|++|++..+..+.... .|.++|+++.|+ ++.+++++.||.|++||+.+
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~ 86 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ---VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT 86 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE---CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe---cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 3578899999999 88999999999999999998665554433 588999999999 88999999999999999999
Q ss_pred CceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeE
Q 019258 145 GGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~ 223 (343)
++ ....+..|.. .|.+++|+| +..+++++.|+.|++||++. .......+..+. .+|.+++|+|.+...
T Consensus 87 ~~-~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~--~~~~~~~~~~~~-------~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 87 GE-KVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWEN--NWALEQTFEGHE-------HFVMCVAFNPKDPST 155 (814)
T ss_dssp CC-EEEEEECCSS-CEEEEEECSSSSEEEEEETTSEEEEEEGGG--TSEEEEEEECCS-------SCEEEEEEETTEEEE
T ss_pred Cc-EEEEEecCCC-CEEEEEEeCCCCEEEEEcCCCEEEEEECCC--CceEEEEEcCCC-------CcEEEEEEEcCCCCE
Confidence 85 4444555655 799999999 77899999999999999988 224444566554 789999999944567
Q ss_pred EEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEee--cCCCCcCCCCCccceEEEecCCeEEEEec
Q 019258 224 CLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDC--HTKSSNISSSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 224 ~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p--~~~~~~~~~~~~~~l~s~s~dg~i~~~~~ 301 (343)
+++|+.||.|++||++.......+. ..|...+..++|+| ++. .+++++.||.|++|+.
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~----------~l~~~~~dg~i~~~d~ 215 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLT----------TGQERGVNYVDYYPLPDKP----------YMITASDDLTIKIWDY 215 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEE----------CCCTTCCCEEEECCSTTCC----------EEEEECTTSEEEEEET
T ss_pred EEEEeCCCeEEEEECCCCcceeEEe----------cCCCCCEEEEEEEECCCCC----------EEEEEeCCCEEEEEEC
Confidence 8899999999999998766555554 44568899999999 666 7999999999999997
Q ss_pred CCC--cccccccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 302 GEE--PFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 302 ~~~--~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
... ...+..+..+|.++.++| ++.++++++.++.|++|+-
T Consensus 216 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 216 QTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNS 257 (814)
T ss_dssp TTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEEC
Confidence 533 223333457899999999 6689999999999999973
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=2.2e-26 Score=202.02 Aligned_cols=241 Identities=15% Similarity=0.208 Sum_probs=183.0
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLH 95 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~ 95 (343)
.|...|.+|+|+| ++++|++|+.|+. +++|++...... .....|...+.++.+. +..|++++.++.++
T Consensus 65 ~~~~~V~~v~~~~----~~~~l~sgs~Dg~-----v~iw~~~~~~~~--~~~~~h~~~~~~~~~~-~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 65 QPGEYISSVAWIK----EGNYLAVGTSSAE-----VQLWDVQQQKRL--RNMTSHSARVGSLSWN-SYILSSGSRSGHIH 132 (318)
T ss_dssp STTCCEEEEEECT----TSSEEEEEETTSE-----EEEEETTTTEEE--EEEECCSSCEEEEEEE-TTEEEEEETTSEEE
T ss_pred CCCCeEEEEEECC----CCCEEEEEECCCc-----EEEeecCCceeE--EEecCccceEEEeecC-CCEEEEEecCCceE
Confidence 5777899999999 8999999999975 779999653222 2234567777776665 78999999999999
Q ss_pred EEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCce---EEEEEcCCCccceEEEEeCC--C
Q 019258 96 VLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGE---FKRVYDGNGLVGFNCVKWAS--P 168 (343)
Q Consensus 96 v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~---~~~~~~~~~~~~v~~~~~~~--~ 168 (343)
+|+......... ....|...+..+.+. +..+++++.||+|++||+++++. .......+.. .+.++.+.+ .
T Consensus 133 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 209 (318)
T 4ggc_A 133 HHDVRVAEHHVA--TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG-AVKAVAWCPWQS 209 (318)
T ss_dssp EEETTSSSCEEE--EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS-CEEEEEECTTST
T ss_pred eeecCCCceeEE--EEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCC-ceEEEEecCCCC
Confidence 999874332211 112588899999998 88999999999999999987431 1222233433 699999988 3
Q ss_pred CEE--EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEE-EecCCcEEEEEccCCceee
Q 019258 169 TEF--VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA-GGSSGTVFAWDLRWQQQSI 245 (343)
Q Consensus 169 ~~l--~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~s-g~~dg~v~iwd~~~~~~~~ 245 (343)
..+ ++++.+++|++||.+. ........ +. ..+..+.++|.+..++++ |+.||.|++||+++++. .
T Consensus 210 ~~~~~~~~~~~~~i~lwd~~~---~~~~~~~~-~~-------~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~-~ 277 (318)
T 4ggc_A 210 NVLATGGGTSDRHIRIWNVCS---GACLSAVD-AH-------SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK-V 277 (318)
T ss_dssp TEEEEEECTTTCEEEEEETTT---CCEEEEEE-CS-------SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE-E
T ss_pred cEEEEEecCCCCEEEEEeccc---cccccccc-ce-------eeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE-E
Confidence 433 3556689999999987 44443333 22 669999999998776544 45899999999998654 4
Q ss_pred eeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 246 VLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 246 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
..+ .+|.+.|++|+|+|++. +|+|||.||+|++|+..+
T Consensus 278 ~~l----------~gH~~~V~~l~~spdg~----------~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 278 AEL----------KGHTSRVLSLTMSPDGA----------TVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEE----------CCCSSCEEEEEECTTSS----------CEEEEETTTEEEEECCSC
T ss_pred EEE----------cCCCCCEEEEEEcCCCC----------EEEEEecCCeEEEEECCC
Confidence 444 57999999999999988 799999999999998743
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-27 Score=218.68 Aligned_cols=264 Identities=9% Similarity=0.105 Sum_probs=194.5
Q ss_pred cccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcC
Q 019258 12 VHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTL 90 (343)
Q Consensus 12 ~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~ 90 (343)
+.|=.....|.+|+|+| ++.++||+|.|++ ++ +.. ...++ -.|++.|.+++|+ ++ .
T Consensus 9 ~~~~~~~~~v~sv~~Sp----DG~~iASas~D~T-----V~--d~~---~~~~l--~gh~~~v~~V~FsPdg-------~ 65 (588)
T 2j04_A 9 VDRKEFEDWKNNLTWAR----DGTLYLTTFPDIS-----IG--QPK---YAKDI--NCNSKNLFHVKEFPLE-------F 65 (588)
T ss_dssp ECSCCCSSSSCCEEECT----TSCEEEECSSSEE-----EE--EEC---CCSCC--SSBGGGTEEEEEECCC-------C
T ss_pred ccHhHhhccEEEEEECC----CCCEEEEEcCCce-----ee--ccc---cccee--cCCCccEEEEEECCCC-------C
Confidence 33444557899999999 9999999999965 44 421 12223 3788999999999 43 4
Q ss_pred CCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc----cceEEEE
Q 019258 91 SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL----VGFNCVK 164 (343)
Q Consensus 91 dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~----~~v~~~~ 164 (343)
++.+.+|+... ...... .|...|.+++|+ |+.+++++.||.|++||..+ ....+. |+. ..+.+++
T Consensus 66 ~~~~~~~~~~~---~~~~~~--~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~sva 136 (588)
T 2j04_A 66 ENKLDFELAQQ---NGLLNS--QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFE 136 (588)
T ss_dssp CCTTTTSCCCS---SCSSTT--SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEE
T ss_pred cceEEEEeCCC---ceEeec--CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEE
Confidence 55555554332 112221 467889999999 99999999999999999543 444444 442 1499999
Q ss_pred eCC-CCEEEEEeCCCcEEEEEccccCCCCC-------eeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEE
Q 019258 165 WAS-PTEFVTGGFGYGLQWWDLRRAGSGGP-------VLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAW 236 (343)
Q Consensus 165 ~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iw 236 (343)
|+| ++.|++|+.||+|++||+.. +.. +.++..+.. .|..+|.+++|+|++ +++++.|++|++|
T Consensus 137 fSPDG~~LAsgs~DGtVkIWd~~~---~~l~~~~~i~l~ti~~~~~---gh~~~V~sVawSPdg---Laass~D~tVrlW 207 (588)
T 2j04_A 137 WNPIESSIVVGNEDGELQFFSIRK---NSENTPEFYFESSIRLSDA---GSKDWVTHIVWYEDV---LVAALSNNSVFSM 207 (588)
T ss_dssp ECSSSSCEEEEETTSEEEEEECCC---CTTTCCCCEEEEEEECSCT---TCCCCEEEEEEETTE---EEEEETTCCEEEE
T ss_pred EcCCCCEEEEEcCCCEEEEEECCC---Cccccccceeeeeeecccc---cccccEEEEEEcCCc---EEEEeCCCeEEEE
Confidence 999 99999999999999999987 332 345543321 022789999999987 5788999999999
Q ss_pred EccCCcee---eeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc-ccc-cc
Q 019258 237 DLRWQQQS---IVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF-ELL-AE 311 (343)
Q Consensus 237 d~~~~~~~---~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~-~~~-~~ 311 (343)
|+...... ..+. .+|...|.+++|+ +. .+++++ +|+|++|+...... .+. .+
T Consensus 208 d~~~~~~~~~~~tL~----------~~h~~~V~svaFs--g~----------~LASa~-~~tIkLWd~~~~~~~~~~~gh 264 (588)
T 2j04_A 208 TVSASSHQPVSRMIQ----------NASRRKITDLKIV--DY----------KVVLTC-PGYVHKIDLKNYSISSLKTGS 264 (588)
T ss_dssp CCCSSSSCCCEEEEE----------CCCSSCCCCEEEE--TT----------EEEEEC-SSEEEEEETTTTEEEEEECSC
T ss_pred ECCCCccccceeeec----------ccccCcEEEEEEE--CC----------EEEEEe-CCeEEEEECCCCeEEEEEcCC
Confidence 99775421 2232 3688899999999 44 688887 69999999765443 333 45
Q ss_pred ccccceeee--cCCCCCeeEEccCCceEEEEe
Q 019258 312 PCAINSFDI--DPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 312 ~~~i~s~~~--~~~~~~~l~~~~~~~~i~~~~ 341 (343)
...++++.+ +| ++..++.+++++. ++|.
T Consensus 265 ~~~V~~va~~~s~-d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 265 LENFHIIPLNHEK-ESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp CSCCCEEEETTCS-SCEEEEECSSCEE-EEEE
T ss_pred CceEEEEEeeeCC-CCCEEEEEcCCCC-EEEe
Confidence 678999999 87 6688999998998 7775
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-26 Score=214.94 Aligned_cols=236 Identities=12% Similarity=0.084 Sum_probs=170.7
Q ss_pred CCCCeeEEEcc-CCCeE-EEEcCCCcEEEEEcc--CceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECC
Q 019258 70 PPTRISSLSTS-HQSLV-AASTLSGSLHVLSSA--MQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVI 143 (343)
Q Consensus 70 ~~~~v~~v~~~-~~~~l-~~~s~dg~v~v~~~~--~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~ 143 (343)
|.+.|.+++|+ ++.+| ++++.||.|++|++. ..+.+..... ..|...|+++.|+ +..+++++.||.|.+|++.
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR-FCFSKRPNAISIAEDDTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec-ccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecC
Confidence 44479999999 77775 889999999999998 5555544332 1467889999998 8899999999999999998
Q ss_pred CCceE---EEEEcCCCccceEEEEeCCC---C-EEEEEeCCCcEEEEEccccCCCCCeeEE-ecccCCCCCcccCeEEEE
Q 019258 144 GGGEF---KRVYDGNGLVGFNCVKWASP---T-EFVTGGFGYGLQWWDLRRAGSGGPVLQF-KGNFGSQGKASGMIHSVD 215 (343)
Q Consensus 144 ~~~~~---~~~~~~~~~~~v~~~~~~~~---~-~l~t~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~v~ 215 (343)
++... ...+..|.. .|.+++|+|. . .|++++.|+.|++||++. +..+..+ .+|. ..|.+++
T Consensus 180 ~~~~~~~~~~~~~~h~~-~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~---~~~~~~~~~~h~-------~~v~~~~ 248 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVS-MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ---CFIVDKWLFGHK-------HFVSSIC 248 (450)
T ss_dssp SCCCSSCCCCCSEECSS-CEEEEEEEECTTSCEEEEEEETTSCEEEEEESC---TTCEEEECCCCS-------SCEEEEE
T ss_pred CcccccccceeeecccC-ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC---CceeeeeecCCC-------CceEEEE
Confidence 75321 113344554 7999999985 4 799999999999999988 6766663 3444 7899999
Q ss_pred EcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCccc--------------ccCCccccEEEEEEeecCCCCcCCC
Q 019258 216 IHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAV--------------THSLSESEVWEVQYDCHTKSSNISS 281 (343)
Q Consensus 216 ~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~--------------~~~~h~~~v~~v~~~p~~~~~~~~~ 281 (343)
|+ ++. ++++|+.|++|++||+++++....+......... ....+...|..++|+|++.
T Consensus 249 ~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~------ 320 (450)
T 2vdu_B 249 CG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP------ 320 (450)
T ss_dssp EC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS------
T ss_pred EC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC------
Confidence 99 765 5689999999999999986554433210000000 0002345799999999887
Q ss_pred CCccceEEEe-cCCeEEEEec--CCC----cccccccccccceeeecCCCCCeeEEc
Q 019258 282 SRVLPAMFCS-EDGILAVVEQ--GEE----PFELLAEPCAINSFDIDPQNPSDVICS 331 (343)
Q Consensus 282 ~~~~~l~s~s-~dg~i~~~~~--~~~----~~~~~~~~~~i~s~~~~~~~~~~l~~~ 331 (343)
++++++ .|+.|++|+. ... ....+..+..+.+++++| + ..+++.
T Consensus 321 ----~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~-~-~~~v~~ 371 (450)
T 2vdu_B 321 ----FVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHN-D-EFQVTL 371 (450)
T ss_dssp ----EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEET-T-EEEEEE
T ss_pred ----EEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecC-C-cEEEEE
Confidence 677777 8999999998 221 112222347899999999 3 344443
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.2e-25 Score=206.27 Aligned_cols=283 Identities=11% Similarity=0.057 Sum_probs=210.7
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCC---ccCCCCCCeeEEEcc-CCCeEE
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPH---SQWTPPTRISSLSTS-HQSLVA 86 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~---~~~~~~~~v~~v~~~-~~~~l~ 86 (343)
.+..++....+.+++|+| ++.++++++.|+. |++|++......... ....|.+.|.+++|+ ++.+++
T Consensus 115 ~~~~~~~~~~~~~~~~s~----~~~~~~~~~~~~~-----i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 185 (433)
T 3bws_A 115 FISRFKTGFQPKSVRFID----NTRLAIPLLEDEG-----MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWV 185 (433)
T ss_dssp EEEEEECSSCBCCCEESS----SSEEEEEBTTSSS-----EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEE
T ss_pred EEEEEcCCCCceEEEEeC----CCeEEEEeCCCCe-----EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEE
Confidence 344455566778899999 6788888877754 779999653222111 123577889999998 778899
Q ss_pred EEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEE-EEEeCCCcEEEEECCCCceEEEEEcCCCccceEEE
Q 019258 87 ASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSEC-VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCV 163 (343)
Q Consensus 87 ~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~-~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~ 163 (343)
+++.|+.|++|++...+.+.... .|...+.++.|+ ++.+ ++++.|+.|++||+++++ ....+..+. .+.++
T Consensus 186 s~~~d~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~-~~~~~~~~~--~~~~~ 259 (433)
T 3bws_A 186 SQMQANAVHVFDLKTLAYKATVD---LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL-EIRKTDKIG--LPRGL 259 (433)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEE---CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-EEEECCCCS--EEEEE
T ss_pred EECCCCEEEEEECCCceEEEEEc---CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-EEEEecCCC--CceEE
Confidence 99999999999998655443332 477889999998 6666 455589999999999884 555555444 59999
Q ss_pred EeCC-CCEEEEEe--------CCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEE
Q 019258 164 KWAS-PTEFVTGG--------FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234 (343)
Q Consensus 164 ~~~~-~~~l~t~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~ 234 (343)
+|+| +..+++++ .|+.|++||++. ++.+..+. +. ..+.+++|+|++..++++++.|+.|+
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~---~~~~~~~~-~~-------~~~~~~~~~~~g~~l~~~~~~~~~v~ 328 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDK---EKLIDTIG-PP-------GNKRHIVSGNTENKIYVSDMCCSKIE 328 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTT---TEEEEEEE-EE-------ECEEEEEECSSTTEEEEEETTTTEEE
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCC---CcEEeecc-CC-------CCcceEEECCCCCEEEEEecCCCEEE
Confidence 9999 66888887 488999999987 55444432 22 56889999999988888999999999
Q ss_pred EEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEec---------------CCeEEEE
Q 019258 235 AWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSE---------------DGILAVV 299 (343)
Q Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~---------------dg~i~~~ 299 (343)
+||+++.+....+. +...+.+++|+|++. .+++++. ||.|++|
T Consensus 329 v~d~~~~~~~~~~~------------~~~~~~~~~~s~dg~----------~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 329 VYDLKEKKVQKSIP------------VFDKPNTIALSPDGK----------YLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp EEETTTTEEEEEEE------------CSSSEEEEEECTTSS----------EEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred EEECCCCcEEEEec------------CCCCCCeEEEcCCCC----------EEEEEecCCCccccccccccccceEEEEE
Confidence 99998754433332 567799999999987 4666554 6799999
Q ss_pred ecCCC-cccccccccccceeeecCCCCCeeEEcc-CCceEEEEeC
Q 019258 300 EQGEE-PFELLAEPCAINSFDIDPQNPSDVICSL-EWESIAIVSR 342 (343)
Q Consensus 300 ~~~~~-~~~~~~~~~~i~s~~~~~~~~~~l~~~~-~~~~i~~~~~ 342 (343)
+.... ..........+.+++++| ++++|++++ .++.|++|+.
T Consensus 387 d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 387 DTTTDTVKEFWEAGNQPTGLDVSP-DNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp ETTTTEEEEEEECSSSEEEEEECT-TSCEEEEEETTTTEEEEEEE
T ss_pred ECCCCcEEEEecCCCCCceEEEcC-CCCEEEEEECCCCeEEEEEe
Confidence 97533 333334456789999999 568887665 5899999973
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.4e-26 Score=204.97 Aligned_cols=222 Identities=10% Similarity=0.032 Sum_probs=163.9
Q ss_pred CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECC---------CCceEEEE
Q 019258 81 HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVI---------GGGEFKRV 151 (343)
Q Consensus 81 ~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~---------~~~~~~~~ 151 (343)
++.+|++|+.||.|++||+...+.+.... ...|.++.++.. +++++.|++|++|+.. ++......
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT-----TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE-----EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe-----cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 67899999999999999998665443332 345666666644 9999999999999765 33223333
Q ss_pred EcCCCccceEEEEeCC---CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe
Q 019258 152 YDGNGLVGFNCVKWAS---PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228 (343)
Q Consensus 152 ~~~~~~~~v~~~~~~~---~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~ 228 (343)
...+.. .|.+++|+| +..+++++.|++|++||++. ++.+.....+.. ..+.+++|+|++. ++++|+
T Consensus 121 ~~~~~~-~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~---~~~~~~~~~~~~------~~i~~~~~~pdg~-~lasg~ 189 (343)
T 3lrv_A 121 EVDSAN-EIIYMYGHNEVNTEYFIWADNRGTIGFQSYED---DSQYIVHSAKSD------VEYSSGVLHKDSL-LLALYS 189 (343)
T ss_dssp ECCCSS-CEEEEECCC---CCEEEEEETTCCEEEEESSS---SCEEEEECCCSS------CCCCEEEECTTSC-EEEEEC
T ss_pred ecCCCC-CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC---CcEEEEEecCCC------CceEEEEECCCCC-EEEEEc
Confidence 334444 799999998 56888999999999999988 565444433321 5699999999875 678999
Q ss_pred cCCcEEEEEccCCceeeeeecCCCCcccccCC-ccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc-
Q 019258 229 SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSL-SESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF- 306 (343)
Q Consensus 229 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~- 306 (343)
.||.|++||++++......+ .. |.++|.+++|+|++. +|++++ |+.|++||......
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~----------~~~h~~~v~~l~fs~~g~----------~l~s~~-~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRF----------PVDEEAKIKEVKFADNGY----------WMVVEC-DQTVVCFDLRKDVGT 248 (343)
T ss_dssp TTSCEEEEESSCTTSCCEEC----------CCCTTSCEEEEEECTTSS----------EEEEEE-SSBEEEEETTSSTTC
T ss_pred CCCEEEEEECCCCCCCccEE----------eccCCCCEEEEEEeCCCC----------EEEEEe-CCeEEEEEcCCCCcc
Confidence 99999999999876552333 34 899999999999987 788888 55999999754321
Q ss_pred -cccc---cccccc--eeeecCCCCCeeEEccC-CceEEEEe
Q 019258 307 -ELLA---EPCAIN--SFDIDPQNPSDVICSLE-WESIAIVS 341 (343)
Q Consensus 307 -~~~~---~~~~i~--s~~~~~~~~~~l~~~~~-~~~i~~~~ 341 (343)
.+.. +..++. +++++| ++.+|++++. ++.|++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 249 LAYPTYTIPEFKTGTVTYDIDD-SGKNMIAYSNESNSLTIYK 289 (343)
T ss_dssp BSSCCCBC-----CCEEEEECT-TSSEEEEEETTTTEEEEEE
T ss_pred eeecccccccccccceEEEECC-CCCEEEEecCCCCcEEEEE
Confidence 1211 124454 599999 6789998776 88899984
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=8e-25 Score=198.11 Aligned_cols=259 Identities=7% Similarity=0.038 Sum_probs=195.1
Q ss_pred CeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeE-EEEcCCCcEEEEEccCceeeeeeccCC
Q 019258 35 KLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLV-AASTLSGSLHVLSSAMQVLLSVDENSG 112 (343)
Q Consensus 35 ~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l-~~~s~dg~v~v~~~~~~~~~~~~~~~~ 112 (343)
.++++++.|+. |++|++... +++..+.+...+.+++|+ ++..| ++++.|+.|++||+...+.+....
T Consensus 3 ~l~vs~~~d~~-----v~v~d~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--- 71 (391)
T 1l0q_A 3 FAYIANSESDN-----ISVIDVTSN---KVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--- 71 (391)
T ss_dssp EEEEEETTTTE-----EEEEETTTT---EEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE---
T ss_pred EEEEEcCCCCE-----EEEEECCCC---eEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE---
Confidence 46788888864 779999653 334455566679999999 77665 677789999999998666554443
Q ss_pred ccccCeEEEEec--CCEEE-EEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE-EEEeCCCcEEEEEccc
Q 019258 113 FHVGPISGVDLT--GSECV-SVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF-VTGGFGYGLQWWDLRR 187 (343)
Q Consensus 113 ~h~~~v~~~~~~--~~~~~-s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l-~t~~~d~~i~iwd~~~ 187 (343)
+...+.++.|+ ++.++ +++.|+.|++||+.+++ ....+..+. .+.+++|++ ++.+ ++++.++.|++||++.
T Consensus 72 -~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~-~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 72 -AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT-VAGTVKTGK--SPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp -CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECSS--SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred -CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCe-EEEEEeCCC--CcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 23389999998 66664 55678999999999985 555555444 589999999 5555 6888899999999988
Q ss_pred cCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEE
Q 019258 188 AGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWE 267 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 267 (343)
++.+..+..+ ..+.+++|+|++..++++++.|+.|++||+++.+....+. +...+..
T Consensus 148 ---~~~~~~~~~~--------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~------------~~~~~~~ 204 (391)
T 1l0q_A 148 ---KAVINTVSVG--------RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK------------VEAAPSG 204 (391)
T ss_dssp ---TEEEEEEECC--------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE------------CSSEEEE
T ss_pred ---CcEEEEEecC--------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe------------cCCCccc
Confidence 6666555543 4479999999998887888999999999998864433332 4567899
Q ss_pred EEEeecCCCCcCCCCCccceEEEe---cCCeEEEEecCCC-cccccccccccceeeecCCCCCee-EEccCCceEEEEeC
Q 019258 268 VQYDCHTKSSNISSSRVLPAMFCS---EDGILAVVEQGEE-PFELLAEPCAINSFDIDPQNPSDV-ICSLEWESIAIVSR 342 (343)
Q Consensus 268 v~~~p~~~~~~~~~~~~~~l~s~s---~dg~i~~~~~~~~-~~~~~~~~~~i~s~~~~~~~~~~l-~~~~~~~~i~~~~~ 342 (343)
++|+|++. .+++++ .++.|++|+.... ....+..+..+.++.++| ++++| ++++.++.|++|+-
T Consensus 205 ~~~~~~g~----------~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 205 IAVNPEGT----------KAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTP-DGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp EEECTTSS----------EEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECT-TSSEEEEEETTTTEEEEEET
T ss_pred eEECCCCC----------EEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEcc-CCCEEEEEcCCCCEEEEEEC
Confidence 99999987 577776 6899999997533 333333445678999999 45666 67788899999973
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=8.1e-25 Score=195.57 Aligned_cols=240 Identities=14% Similarity=0.171 Sum_probs=183.4
Q ss_pred CCCCCCeeEEEcc-C---CCeEEEEcCCCcEEEEEccC-ceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEE
Q 019258 68 WTPPTRISSLSTS-H---QSLVAASTLSGSLHVLSSAM-QVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLV 140 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~---~~~l~~~s~dg~v~v~~~~~-~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~w 140 (343)
..|.+.|++++|+ + +.+|++|+.||.|++|++.. ...+.. ....|.++|+++.|+ ++.|++++.||.|++|
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPK--AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEE--EEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEE--EeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 4688999999999 4 48999999999999999985 333211 123589999999998 8899999999999999
Q ss_pred ECCCCceEEEEEcCCCccceEEEEe--CC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEc
Q 019258 141 SVIGGGEFKRVYDGNGLVGFNCVKW--AS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIH 217 (343)
Q Consensus 141 d~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~ 217 (343)
|+++++ ...... |.. .|.+++| ++ ...|++++.|+.|++||++. ++++..+..+ ..+.++.+.
T Consensus 114 d~~~~~-~~~~~~-~~~-~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~~--------~~~~~~~~~ 179 (368)
T 3mmy_A 114 DLSSNQ-AIQIAQ-HDA-PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS---SNPMMVLQLP--------ERCYCADVI 179 (368)
T ss_dssp ETTTTE-EEEEEE-CSS-CEEEEEEEECSSCEEEEEEETTSEEEEECSSC---SSCSEEEECS--------SCEEEEEEE
T ss_pred EcCCCC-ceeecc-ccC-ceEEEEEEeCCCCCEEEEccCCCcEEEEECCC---CcEEEEEecC--------CCceEEEec
Confidence 999984 455443 444 7999999 77 67799999999999999998 7777777644 447777777
Q ss_pred CCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEE
Q 019258 218 PSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILA 297 (343)
Q Consensus 218 p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~ 297 (343)
+. .+++++.++.+.+||++.......... ..+...+..+.+.+....... .+++++.||.|+
T Consensus 180 ~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dg~i~ 241 (368)
T 3mmy_A 180 YP---MAVVATAERGLIVYQLENQPSEFRRIE---------SPLKHQHRCVAIFKDKQNKPT------GFALGSIEGRVA 241 (368)
T ss_dssp TT---EEEEEEGGGCEEEEECSSSCEEEEECC---------CSCSSCEEEEEEEECTTSCEE------EEEEEETTSEEE
T ss_pred CC---eeEEEeCCCcEEEEEeccccchhhhcc---------ccccCCCceEEEcccCCCCCC------eEEEecCCCcEE
Confidence 53 456788999999999988665555442 334556667777665441000 299999999999
Q ss_pred EEecCCCcc-----ccccccc------------ccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 298 VVEQGEEPF-----ELLAEPC------------AINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 298 ~~~~~~~~~-----~~~~~~~------------~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
+|+...... .+..+.. +|.+++++| ++.+|++|+.++.|++|+-
T Consensus 242 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 242 IHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp EEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEET
T ss_pred EEecCCCCccccceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEEC
Confidence 999864321 2112222 699999999 6799999999999999974
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=2e-26 Score=209.57 Aligned_cols=252 Identities=8% Similarity=0.013 Sum_probs=166.6
Q ss_pred ccCCcccceeeEEecCCC----------------CCCCCeEEEEeecCCCCCCceeeeeCCCCCCC--CCC-ccCCCCCC
Q 019258 13 HRFPQSKYIDAVRWLPPL----------------SPLSKLAVLAIYDTDADSPSLETHSISLPASL--TPH-SQWTPPTR 73 (343)
Q Consensus 13 ~~~~~~~~i~~v~w~p~~----------------~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~--~~~-~~~~~~~~ 73 (343)
..+.+...+..+.|.+.. .+++.++++|+.|++ +++|++...... .++ ....|.+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~d~~-----v~lw~~~~~~~~~~~~~~~~~gH~~~ 138 (393)
T 4gq1_A 64 FTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQDNT-----VRLIITKNETIITQHVLGGKSGHHNF 138 (393)
T ss_dssp EEEECSSCEEEEEECTTCEEECC----------CCEEEEEEEEEETTSC-----EEEEEEETTEEEEEEEECTTTSCSSC
T ss_pred EEEecCCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEeCCCc-----EEEEECCCCccceeeeecccCCCCCc
Confidence 334455667777777621 124568999999975 779998553211 112 23468999
Q ss_pred eeEEEcc---------CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--C-CEEEEEeCCCcEEEEE
Q 019258 74 ISSLSTS---------HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--G-SECVSVGEDGRVNLVS 141 (343)
Q Consensus 74 v~~v~~~---------~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~-~~~~s~s~dg~v~~wd 141 (343)
|++++|+ ++.+|++++.|++|+|||+.......... .|..+|.+++|+ + ..+++++.||+|++||
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd 215 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY---PLSSPGISVQFRPSNPNQLIVGERNGNIRIFD 215 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE---ECSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec---CCCCCcEEEEECCCCCceEEecCCCCEEEEEE
Confidence 9999996 45789999999999999998554443322 488899999998 3 4799999999999999
Q ss_pred CCCCceEEEEE------------------------cCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCee
Q 019258 142 VIGGGEFKRVY------------------------DGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVL 195 (343)
Q Consensus 142 ~~~~~~~~~~~------------------------~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~ 195 (343)
+++++...... ..+.. .+.++.|.+ +..+++++.|+++++||++. ++...
T Consensus 216 ~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~---~~~~~ 291 (393)
T 4gq1_A 216 WTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS-SLANVRWIGSDGSGILAMCKSGAWLRWNLFA---NNDYN 291 (393)
T ss_dssp TTCCC----------CSCCCSEEEESGGGC------CCSS-SCSEEEEETTTTCEEEEECTTSEEEEEEC----------
T ss_pred CCCCcccccccccCCcccceEEecccccceeeeecccccc-cceeeeeecCCCCEEEEEeCCCCEEEEECcc---CCCCc
Confidence 98764222111 12223 578888874 78899999999999999987 44333
Q ss_pred EEecccCCCC-----------CcccCeEEEEEcC-CCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccc
Q 019258 196 QFKGNFGSQG-----------KASGMIHSVDIHP-SRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSES 263 (343)
Q Consensus 196 ~~~~~~~~~~-----------~~~~~i~~v~~~p-~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~ 263 (343)
.+..+..... ..........++| .+..++++|+.||+|++||+.++....... .|..
T Consensus 292 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~-----------~~~~ 360 (393)
T 4gq1_A 292 EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI-----------QLGM 360 (393)
T ss_dssp ------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE-----------ECSS
T ss_pred eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec-----------CCCC
Confidence 3322210000 0001122233444 344567788899999999998866554443 4778
Q ss_pred cEEEEEEeecCCCCcCCCCCccceEEEecCCeEE
Q 019258 264 EVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILA 297 (343)
Q Consensus 264 ~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~ 297 (343)
+|.+|+|+|++. +|+++++||.+.
T Consensus 361 ~V~svafspdG~----------~LA~as~~Gv~l 384 (393)
T 4gq1_A 361 PIVDFCWHQDGS----------HLAIATEGSVLL 384 (393)
T ss_dssp CEEEEEECTTSS----------EEEEEESSEEEE
T ss_pred cEEEEEEcCCCC----------EEEEEeCCCeEE
Confidence 999999999988 789998877543
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.7e-25 Score=202.15 Aligned_cols=233 Identities=11% Similarity=0.052 Sum_probs=172.5
Q ss_pred CcccceeeEEecCCCCCCCCeE-EEEeecCCCCCCceeeeeCC--CCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLA-VLAIYDTDADSPSLETHSIS--LPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLS 91 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l-~t~s~D~~~~~~~l~~w~~~--~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~d 91 (343)
++...|.+++|+| ++++| ++|+.|+. +++|++. .......+....+...|.+++|+ ++.+|++++.+
T Consensus 100 ~~~~~v~~~~~s~----d~~~l~~~~~~dg~-----v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~ 170 (450)
T 2vdu_B 100 PIYSYIRNLRLTS----DESRLIACADSDKS-----LLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF 170 (450)
T ss_dssp CCCCCEEEEEECT----TSSEEEEEEGGGTE-----EEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCceEEEEEcC----CCCEEEEEECCCCe-----EEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC
Confidence 3555799999999 78885 89998865 7799996 32222222223677899999999 88999999999
Q ss_pred CcEEEEEccCceeee-eeccCCccccCeEEEEec-C---C-EEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEe
Q 019258 92 GSLHVLSSAMQVLLS-VDENSGFHVGPISGVDLT-G---S-ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKW 165 (343)
Q Consensus 92 g~v~v~~~~~~~~~~-~~~~~~~h~~~v~~~~~~-~---~-~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 165 (343)
|.|++|++....... .......|.+.|+++.|+ . . .+++++.|++|++||+.++.........|.. .|.+++|
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~-~v~~~~~ 249 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH-FVSSICC 249 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS-CEEEEEE
T ss_pred CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC-ceEEEEE
Confidence 999999997544332 222334688999999998 4 4 8999999999999999987645454555655 8999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccC------------------CCCCcccCeEEEEEcCCCCeEEEEE
Q 019258 166 ASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFG------------------SQGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 166 ~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------------------~~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
+.+..|++++.|++|++||++. ++.+..+..+.. ........+.+++|+|++..++ ++
T Consensus 250 sd~~~l~s~~~d~~v~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-~~ 325 (450)
T 2vdu_B 250 GKDYLLLSAGGDDKIFAWDWKT---GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVA-FF 325 (450)
T ss_dssp CSTTEEEEEESSSEEEEEETTT---CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEE-EE
T ss_pred CCCCEEEEEeCCCeEEEEECCC---CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEE-EE
Confidence 8667899999999999999998 676666653210 0001115699999999987654 55
Q ss_pred e-cCCcEEEEEc--cCCc--eeeeeecCCCCcccccCCccccEEEEEEeec
Q 019258 228 G-SSGTVFAWDL--RWQQ--QSIVLSGVGTGEAVTHSLSESEVWEVQYDCH 273 (343)
Q Consensus 228 ~-~dg~v~iwd~--~~~~--~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 273 (343)
+ .|+.|++||+ .... .....+ ..| ..|.+++|+|+
T Consensus 326 ~~~d~~i~iw~~~~~~~~~l~~~~~~----------~~~-~~v~~~~~~~~ 365 (450)
T 2vdu_B 326 VEATKCIIILEMSEKQKGDLALKQII----------TFP-YNVISLSAHND 365 (450)
T ss_dssp ETTCSEEEEEEECSSSTTCEEEEEEE----------ECS-SCEEEEEEETT
T ss_pred ECCCCeEEEEEeccCCCCceeeccEe----------ccC-CceEEEEecCC
Confidence 5 8999999999 4321 223333 345 78999999994
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.5e-25 Score=207.30 Aligned_cols=253 Identities=15% Similarity=0.150 Sum_probs=183.5
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|...|..|+++| ++ .|+. +++|+... . ....+.+...|.+++|+ ++..|++++.||.|
T Consensus 50 gh~~~v~~V~FsP----dg-------~~~~-----~~~~~~~~---~-~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V 109 (588)
T 2j04_A 50 CNSKNLFHVKEFP----LE-------FENK-----LDFELAQQ---N-GLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNV 109 (588)
T ss_dssp SBGGGTEEEEEEC----CC-------CCCT-----TTTSCCCS---S-CSSTTSCSCCEEEEEECSSSSCEEEEETTSCE
T ss_pred CCCccEEEEEECC----CC-------Ccce-----EEEEeCCC---c-eEeecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 6888999999999 55 3322 22444321 1 23344667889999999 99999999999999
Q ss_pred EEEEccCceeeeeeccCCcccc-----CeEEEEec--CCEEEEEeCCCcEEEEECCCCce------EEEEE----cCCCc
Q 019258 95 HVLSSAMQVLLSVDENSGFHVG-----PISGVDLT--GSECVSVGEDGRVNLVSVIGGGE------FKRVY----DGNGL 157 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~------~~~~~----~~~~~ 157 (343)
++|+... .+.. .. |.. .|.+++|+ |+.+++|+.||+|++||+.++.. ....+ .+|..
T Consensus 110 ~iwd~~~--~l~~---l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~ 183 (588)
T 2j04_A 110 SVFKDNK--MLTN---LD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKD 183 (588)
T ss_dssp EEEETTE--EEEE---CC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCC
T ss_pred EEEeCCc--eeee---cc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccc
Confidence 9999653 2222 22 443 59999999 99999999999999999988642 23443 44444
Q ss_pred cceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCC---CeeEEe-cccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcE
Q 019258 158 VGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGG---PVLQFK-GNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTV 233 (343)
Q Consensus 158 ~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~---~~~~~~-~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v 233 (343)
.|.+++|+|.. +++++.|++|++||+.. .. ...++. +|. ..|.+++|+ + ..+|+++ +++|
T Consensus 184 -~V~sVawSPdg-Laass~D~tVrlWd~~~---~~~~~~~~tL~~~h~-------~~V~svaFs--g-~~LASa~-~~tI 247 (588)
T 2j04_A 184 -WVTHIVWYEDV-LVAALSNNSVFSMTVSA---SSHQPVSRMIQNASR-------RKITDLKIV--D-YKVVLTC-PGYV 247 (588)
T ss_dssp -CEEEEEEETTE-EEEEETTCCEEEECCCS---SSSCCCEEEEECCCS-------SCCCCEEEE--T-TEEEEEC-SSEE
T ss_pred -cEEEEEEcCCc-EEEEeCCCeEEEEECCC---Cccccceeeeccccc-------CcEEEEEEE--C-CEEEEEe-CCeE
Confidence 89999999965 99999999999999977 33 223453 333 679999999 4 3567776 6999
Q ss_pred EEEEccCCceeeeeecCCCCcccccCCccccEEEEEE--eecCCCCcCCCCCccceEEEecCCeEEEEecCC------Cc
Q 019258 234 FAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQY--DCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE------EP 305 (343)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~------~~ 305 (343)
++||+..... ..+. .+|.+.|+.|.| +|++. .++++++||+ ++|..+. ..
T Consensus 248 kLWd~~~~~~-~~~~----------~gh~~~V~~va~~~s~d~~----------~La~a~edG~-klw~~d~~~~spd~~ 305 (588)
T 2j04_A 248 HKIDLKNYSI-SSLK----------TGSLENFHIIPLNHEKEST----------ILLMSNKTSY-KVLLEDELHVTADNI 305 (588)
T ss_dssp EEEETTTTEE-EEEE----------CSCCSCCCEEEETTCSSCE----------EEEECSSCEE-EEEESSSEEEECCCS
T ss_pred EEEECCCCeE-EEEE----------cCCCceEEEEEeeeCCCCC----------EEEEEcCCCC-EEEeeccEEECCCce
Confidence 9999987433 2333 369999999999 98876 6999999999 7776421 00
Q ss_pred ------------------ccccccccccceeeecCCCCCeeEEccC
Q 019258 306 ------------------FELLAEPCAINSFDIDPQNPSDVICSLE 333 (343)
Q Consensus 306 ------------------~~~~~~~~~i~s~~~~~~~~~~l~~~~~ 333 (343)
...+.....|++++++| +|+.++.+++
T Consensus 306 l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SP-dG~~lA~~~~ 350 (588)
T 2j04_A 306 IAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSP-DGYSIAIVYD 350 (588)
T ss_dssp SHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECT-TSSEEEEEEE
T ss_pred EEEEcCCEEEEEECCCCceeeeccceEEEEEEECC-CCCEEEEEEe
Confidence 00111123589999999 6788888763
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=2.5e-24 Score=193.04 Aligned_cols=228 Identities=10% Similarity=0.066 Sum_probs=164.5
Q ss_pred CCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEE-EEEeCCCcEEEEECC
Q 019258 68 WTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSEC-VSVGEDGRVNLVSVI 143 (343)
Q Consensus 68 ~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~-~s~s~dg~v~~wd~~ 143 (343)
-.|.+.|++++|+ ++.+|++|+.+| +++|++...+..... +...+..+.+. ++.+ ++++.|++|++||+.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~ 89 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ-----EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV 89 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE-----ECSCCCEEEECTTSSEEEEECSSTTEEEEEETT
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee-----ecCCeEEEEEcCCCCEEEEEECCccEEEEEECC
Confidence 4578999999999 888888887775 789998754433222 11235555554 5555 677888999999999
Q ss_pred CCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCC-CCeeEEecccCCCCCcccCeEEEEEcCCCCe
Q 019258 144 GGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKH 222 (343)
Q Consensus 144 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~ 222 (343)
+++ ....+..+. .|.++++++.. ++.+ .|+.|++||++. . +.+..+.. +...++++| ..
T Consensus 90 ~~~-~~~~~~~~~--~v~~v~~~~~~-~~~~-~~~~i~i~d~~~---~~~~~~~~~~----------~~~~~~~s~--~~ 149 (355)
T 3vu4_A 90 KKQ-DVSRIKVDA--PVKDLFLSREF-IVVS-YGDVISVFKFGN---PWKRITDDIR----------FGGVCEFSN--GL 149 (355)
T ss_dssp TTE-EEEEEECSS--CEEEEEECSSE-EEEE-ETTEEEEEESST---TCCBSSCCEE----------EEEEEEEET--TE
T ss_pred CCc-EEEEEECCC--ceEEEEEcCCE-EEEE-EcCEEEEEECCC---CceeeEEecc----------CCceEEEEc--cE
Confidence 985 444444443 69999998754 3333 488999999988 4 55555542 233455666 34
Q ss_pred EEEE-EecCCcEEEEEccCCce--------------e-eeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccc
Q 019258 223 TCLA-GGSSGTVFAWDLRWQQQ--------------S-IVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLP 286 (343)
Q Consensus 223 ~~~s-g~~dg~v~iwd~~~~~~--------------~-~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~ 286 (343)
++++ |+.||.|++||++.... | ...+ .+|.+.|.+++|+|++. +
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~----------~~h~~~v~~~~~s~~g~----------~ 209 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI----------KAHTNPIKMVRLNRKSD----------M 209 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEE----------CCCSSCEEEEEECTTSS----------E
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE----------EccCCceEEEEECCCCC----------E
Confidence 4444 78999999999987541 2 3333 67999999999999887 8
Q ss_pred eEEEecCCe-EEEEecCCC--ccccc-c-cccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 287 AMFCSEDGI-LAVVEQGEE--PFELL-A-EPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 287 l~s~s~dg~-i~~~~~~~~--~~~~~-~-~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
|++|+.||+ |++|+.... ..++. . +..+|++++|+| ++.+|+++++++.|++|+-
T Consensus 210 l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 210 VATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWST-DGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECT-TSCEEEEEETTCEEEEEES
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECC-CCCEEEEEECCCEEEEEEc
Confidence 999999998 999997532 33443 2 567899999999 6799999999999999973
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=1.9e-22 Score=182.44 Aligned_cols=242 Identities=11% Similarity=0.049 Sum_probs=180.1
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeE-EEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEE-E
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLA-VLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVA-A 87 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l-~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~-~ 87 (343)
.+..+++...+.+++|+| +++++ ++++.|+. |++|++... +++..+.+...+.+++|+ +++.|+ +
T Consensus 24 ~~~~~~~~~~~~~~~~s~----dg~~l~~~~~~d~~-----i~v~d~~~~---~~~~~~~~~~~v~~~~~spdg~~l~~~ 91 (391)
T 1l0q_A 24 VTATIPVGSNPMGAVISP----DGTKVYVANAHSND-----VSIIDTATN---NVIATVPAGSSPQGVAVSPDGKQVYVT 91 (391)
T ss_dssp EEEEEECSSSEEEEEECT----TSSEEEEEEGGGTE-----EEEEETTTT---EEEEEEECSSSEEEEEECTTSSEEEEE
T ss_pred EEEEeecCCCcceEEECC----CCCEEEEECCCCCe-----EEEEECCCC---eEEEEEECCCCccceEECCCCCEEEEE
Confidence 445556667799999999 77665 67777754 779999542 334455566699999999 677664 5
Q ss_pred EcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEE-EEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEE
Q 019258 88 STLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSEC-VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVK 164 (343)
Q Consensus 88 ~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~-~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~ 164 (343)
++.++.|++||+...+.+.... +...+.++.|+ ++.+ ++++.|+.|++||+.+++ ....+..+. .+.+++
T Consensus 92 ~~~~~~v~v~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-~~~~~~~~~--~~~~~~ 164 (391)
T 1l0q_A 92 NMASSTLSVIDTTSNTVAGTVK----TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA-VINTVSVGR--SPKGIA 164 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEE----CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-EEEEEECCS--SEEEEE
T ss_pred ECCCCEEEEEECCCCeEEEEEe----CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEecCC--CcceEE
Confidence 5567999999998766554443 33568999998 6666 788889999999999884 555555554 489999
Q ss_pred eCC-CCEE-EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe--cCCcEEEEEccC
Q 019258 165 WAS-PTEF-VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG--SSGTVFAWDLRW 240 (343)
Q Consensus 165 ~~~-~~~l-~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~--~dg~v~iwd~~~ 240 (343)
|+| +..+ ++++.++.|++||++. ++....+.. . ..+.+++|+|++..+++++. .++.|++||+++
T Consensus 165 ~~~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~~-~-------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 165 VTPDGTKVYVANFDSMSISVIDTVT---NSVIDTVKV-E-------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEEC-S-------SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCC---CeEEEEEec-C-------CCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 999 5555 6777899999999988 555544442 2 56899999999887765554 789999999988
Q ss_pred CceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 241 QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
++....+. .| ..+.+++|+|++.. .+++++.|+.|++|+...
T Consensus 234 ~~~~~~~~-----------~~-~~~~~~~~s~dg~~---------l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 234 NKITARIP-----------VG-PDPAGIAVTPDGKK---------VYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp TEEEEEEE-----------CC-SSEEEEEECTTSSE---------EEEEETTTTEEEEEETTT
T ss_pred CeEEEEEe-----------cC-CCccEEEEccCCCE---------EEEEcCCCCEEEEEECCC
Confidence 64433332 23 35789999999874 447889999999999753
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=4.1e-23 Score=179.99 Aligned_cols=282 Identities=10% Similarity=-0.009 Sum_probs=178.3
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCC-CCCeeEEEcc--CCCeEEEEcCCCcEE-
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTP-PTRISSLSTS--HQSLVAASTLSGSLH- 95 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~-~~~v~~v~~~--~~~~l~~~s~dg~v~- 95 (343)
.+..|.|-.+. -....+++++.+ .+++|+..+.-+++++.++.. +.+|..+.|. .-+++.++-.+=.+.
T Consensus 41 ~~~~~~~~~~~-~~~~~~~~~~~~------~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 113 (356)
T 2w18_A 41 DVSAMFWERAG-CKEPCIITACED------VVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIRE 113 (356)
T ss_dssp EEEEEEEC-----CEEEEEEEESS------EEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEE
T ss_pred EEeeeeeccCC-CCccEEEEeccc------eEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccc
Confidence 37778887732 122466777765 578999977545566666554 4589999998 345666665544433
Q ss_pred EEEcc--Cc----eeeeeeccCCccccCeEEEEecCCEEEEEe---CCCcEEEEECCC-CceEEEEEcCCCccceEEEEe
Q 019258 96 VLSSA--MQ----VLLSVDENSGFHVGPISGVDLTGSECVSVG---EDGRVNLVSVIG-GGEFKRVYDGNGLVGFNCVKW 165 (343)
Q Consensus 96 v~~~~--~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s---~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~~~~ 165 (343)
++-+. .. ...... .+|...|.++ ....+++.+ .|+.|++|++.. ++ .......|.. .++.++|
T Consensus 114 v~sla~spd~~~~~~~l~s---~g~~~~v~~l--~~g~lv~ss~~g~d~~V~~~~~s~dG~-~~~s~~~~~~-~v~~l~f 186 (356)
T 2w18_A 114 IRALFCSSDDESEKQVLLK---SGNIKAVLGL--TKRRLVSSSGTLSDQQVEVMTFAEDGG-GKENQFLMPP-EETILTF 186 (356)
T ss_dssp EEEECC------CCEEEEE---EEEEEEEEEE--TTTEEEEEESSSTTCEEEEEEECTTSC-EEEEEEECCC-SSCEEEE
T ss_pred eEEEEECCCccccccEEEe---CCCeEEEEec--CCCcEEEecccCCCCcEEEEEECCCCc-eeeeeccCCC-ceeeEEe
Confidence 22222 11 111111 2355555544 444454443 599999999954 54 4333333443 4666666
Q ss_pred CC----CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeE-----------EEEEecC
Q 019258 166 AS----PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT-----------CLAGGSS 230 (343)
Q Consensus 166 ~~----~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~-----------~~sg~~d 230 (343)
++ +..|++++.|++|+|||+++ ++.+.++..+.... ..+.+++|+|++..+ +++|+.|
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~T---Gk~l~tL~g~~~~v----~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D 259 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKT---GQLLKKMHIDDSYQ----ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV 259 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTT---CCEEEEEECCC-------CCCEEEEEEETTEEEEEEC------------CC
T ss_pred eccCCCCceEEEecCCCcEEEEECCC---CcEEEEEcCCCcce----eeeEEEEECCCCCEEEEeccCCCcceeeccCCC
Confidence 65 57899999999999999999 88888887554211 468888999988654 3678899
Q ss_pred CcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC--cccc
Q 019258 231 GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE--PFEL 308 (343)
Q Consensus 231 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~--~~~~ 308 (343)
++|++||.+++.....+.- . ...+|...+.+..++ +. .+++++.||+|++||.... ..++
T Consensus 260 ~tIklWd~~tgk~l~v~~~-~-----~p~Gh~~~~lsg~~s--g~----------~lASgS~DgTIkIWDl~tGk~l~tL 321 (356)
T 2w18_A 260 FQLIVINPKTTLSVGVMLY-C-----LPPGQAGRFLEGDVK--DH----------CAAAILTSGTIAIWDLLLGQCTALL 321 (356)
T ss_dssp EEEEEEETTTTEEEEEEEE-C-----CCTTCCCCEEEEEEE--TT----------EEEEEETTSCEEEEETTTCSEEEEE
T ss_pred cEEEEEECCCCEEEEEEEe-e-----ccCCCcceeEccccC--CC----------EEEEEcCCCcEEEEECCCCcEEEEe
Confidence 9999999987654332210 0 013565555444444 44 7899999999999998643 2333
Q ss_pred ccccc-ccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 309 LAEPC-AINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 309 ~~~~~-~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
..+.. .+.+++|+| +|++|++|++|+.|++|+
T Consensus 322 ~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 322 PPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp CCC--CCCCEEEECS-SSSEEEEECTTSCEEEEE
T ss_pred cCCCCCeEEEEEECC-CCCEEEEEECCCcEEEec
Confidence 33444 455689999 679999999999999997
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=2.8e-23 Score=190.46 Aligned_cols=243 Identities=9% Similarity=0.024 Sum_probs=180.3
Q ss_pred CccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeec--cCCccccCeEEEEec--CCEEEEEeCCCcEEE
Q 019258 65 HSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDE--NSGFHVGPISGVDLT--GSECVSVGEDGRVNL 139 (343)
Q Consensus 65 ~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~--~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~ 139 (343)
+..+.....+.+++|+ ++.++++++.++.|++||+...+...... ....|.+.|.++.|. +..+++++.|+.|++
T Consensus 116 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~ 195 (433)
T 3bws_A 116 ISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHV 195 (433)
T ss_dssp EEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEE
T ss_pred EEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEE
Confidence 4445556677899999 66677777788999999998665543222 123588899999997 778899999999999
Q ss_pred EECCCCceEEEEEcCCCccceEEEEeCC-CCEEE-EEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEc
Q 019258 140 VSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIH 217 (343)
Q Consensus 140 wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~ 217 (343)
||+++++ ....+..+.. .+.+++|+| +..++ +++.|+.|++||++. ++.+..+..+ ..+.+++|+
T Consensus 196 ~d~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~---~~~~~~~~~~--------~~~~~~~~~ 262 (433)
T 3bws_A 196 FDLKTLA-YKATVDLTGK-WSKILLYDPIRDLVYCSNWISEDISVIDRKT---KLEIRKTDKI--------GLPRGLLLS 262 (433)
T ss_dssp EETTTCC-EEEEEECSSS-SEEEEEEETTTTEEEEEETTTTEEEEEETTT---TEEEEECCCC--------SEEEEEEEC
T ss_pred EECCCce-EEEEEcCCCC-CeeEEEEcCCCCEEEEEecCCCcEEEEECCC---CcEEEEecCC--------CCceEEEEc
Confidence 9999875 4444444544 799999999 66664 555799999999988 5555555432 458999999
Q ss_pred CCCCeEEEEEe-------cCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEE
Q 019258 218 PSRKHTCLAGG-------SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFC 290 (343)
Q Consensus 218 p~~~~~~~sg~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~ 290 (343)
|++..+++++. .||.|++||+++++..... .|...+..++|+|++.. .++++
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~------------~~~~~~~~~~~~~~g~~---------l~~~~ 321 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI------------GPPGNKRHIVSGNTENK---------IYVSD 321 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE------------EEEECEEEEEECSSTTE---------EEEEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec------------cCCCCcceEEECCCCCE---------EEEEe
Confidence 99876654432 5889999999875433332 25678899999999875 56777
Q ss_pred ecCCeEEEEecCCC-cccccccccccceeeecCCCCCeeEEccC---------------CceEEEEeC
Q 019258 291 SEDGILAVVEQGEE-PFELLAEPCAINSFDIDPQNPSDVICSLE---------------WESIAIVSR 342 (343)
Q Consensus 291 s~dg~i~~~~~~~~-~~~~~~~~~~i~s~~~~~~~~~~l~~~~~---------------~~~i~~~~~ 342 (343)
+.|+.|++|+.... ....+.....+.+++++| ++.+|++++. ++.|++|+-
T Consensus 322 ~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 322 MCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred cCCCEEEEEECCCCcEEEEecCCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 99999999998633 333344456789999999 5677777765 458999873
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=3.7e-23 Score=180.23 Aligned_cols=185 Identities=14% Similarity=0.079 Sum_probs=124.1
Q ss_pred CCeEEEEc---CCCcEEEEEccC-ceeeeeeccCCccccCeEEEEec-----CCEEEEEeCCCcEEEEECCCCceEEEEE
Q 019258 82 QSLVAAST---LSGSLHVLSSAM-QVLLSVDENSGFHVGPISGVDLT-----GSECVSVGEDGRVNLVSVIGGGEFKRVY 152 (343)
Q Consensus 82 ~~~l~~~s---~dg~v~v~~~~~-~~~~~~~~~~~~h~~~v~~~~~~-----~~~~~s~s~dg~v~~wd~~~~~~~~~~~ 152 (343)
+..++.++ .|+.|++|++.. ++.+.... .|...+..++|+ +..+++++.|++|++||+.+++ ....+
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~---~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk-~l~tL 219 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF---LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ-LLKKM 219 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEE---ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC-EEEEE
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeec---cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc-EEEEE
Confidence 34444444 499999999963 44333222 466666665555 5899999999999999999996 44444
Q ss_pred cCCC--ccceEEEEeCC-CCEE------------EEEeCCCcEEEEEccccCCCCCeeEEec--ccCCCCCcccCeEEEE
Q 019258 153 DGNG--LVGFNCVKWAS-PTEF------------VTGGFGYGLQWWDLRRAGSGGPVLQFKG--NFGSQGKASGMIHSVD 215 (343)
Q Consensus 153 ~~~~--~~~v~~~~~~~-~~~l------------~t~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~v~ 215 (343)
..++ ...+.+++|+| +..+ ++|+.|++|++||..+ ++.+..+.. ..++. ..+.+.+
T Consensus 220 ~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t---gk~l~v~~~~~p~Gh~----~~~lsg~ 292 (356)
T 2w18_A 220 HIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT---TLSVGVMLYCLPPGQA----GRFLEGD 292 (356)
T ss_dssp ECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT---TEEEEEEEECCCTTCC----CCEEEEE
T ss_pred cCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC---CEEEEEEEeeccCCCc----ceeEccc
Confidence 4332 12577788888 4443 5678899999999987 555544321 11111 3344444
Q ss_pred EcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEE-EEEEeecCCCCcCCCCCccceEEEecCC
Q 019258 216 IHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVW-EVQYDCHTKSSNISSSRVLPAMFCSEDG 294 (343)
Q Consensus 216 ~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~~~~~~~~~~l~s~s~dg 294 (343)
++ + .++++|+.||+|+|||+++++....+ .+|...+. .++|+|++. +|++||.|+
T Consensus 293 ~s--g-~~lASgS~DgTIkIWDl~tGk~l~tL-----------~gH~~~vvs~vafSPDG~----------~LaSGS~D~ 348 (356)
T 2w18_A 293 VK--D-HCAAAILTSGTIAIWDLLLGQCTALL-----------PPVSDQHWSFVKWSGTDS----------HLLAGQKDG 348 (356)
T ss_dssp EE--T-TEEEEEETTSCEEEEETTTCSEEEEE-----------CCC--CCCCEEEECSSSS----------EEEEECTTS
T ss_pred cC--C-CEEEEEcCCCcEEEEECCCCcEEEEe-----------cCCCCCeEEEEEECCCCC----------EEEEEECCC
Confidence 43 3 36789999999999999986655443 45766655 589999988 799999999
Q ss_pred eEEEEec
Q 019258 295 ILAVVEQ 301 (343)
Q Consensus 295 ~i~~~~~ 301 (343)
+|++|+.
T Consensus 349 TIklWd~ 355 (356)
T 2w18_A 349 NIFVYHY 355 (356)
T ss_dssp CEEEEEE
T ss_pred cEEEecC
Confidence 9999984
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=8.6e-22 Score=180.22 Aligned_cols=279 Identities=13% Similarity=0.092 Sum_probs=190.4
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecC--CC-CCCceeeeeC--CCCCCCCCCccCCCCCCeeEEEcc-------------
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDT--DA-DSPSLETHSI--SLPASLTPHSQWTPPTRISSLSTS------------- 80 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~--~~-~~~~l~~w~~--~~~~~~~~~~~~~~~~~v~~v~~~------------- 80 (343)
..|+..+|.+ ...+.+++|+.+. .. ..+.+++||+ .............|...+..+++.
T Consensus 63 ~~~~~~~w~~---~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 63 QEVQPAAWSA---LGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGCCHHHHHT---TTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCHHHHHh---cCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 4788889999 3457788998652 11 1235789999 553321111123455556555544
Q ss_pred --CCCeEEEEcCC------CcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCC---cEEEEECCCCce
Q 019258 81 --HQSLVAASTLS------GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDG---RVNLVSVIGGGE 147 (343)
Q Consensus 81 --~~~~l~~~s~d------g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg---~v~~wd~~~~~~ 147 (343)
.+..++.++.+ +.|++||+.......+. .|...+.+++|+ ++.+++++.|+ .|++||+.+++
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~----~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~- 214 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVH----RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA- 214 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEE----EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEe----CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc-
Confidence 15566666554 79999999743322222 478899999999 88999999885 99999999884
Q ss_pred EEEEEcCCCccceEEEEeCC-CCEEE-EEeCCCc--EEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeE
Q 019258 148 FKRVYDGNGLVGFNCVKWAS-PTEFV-TGGFGYG--LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 148 ~~~~~~~~~~~~v~~~~~~~-~~~l~-t~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~ 223 (343)
...+.. +.. .+.+++|+| +..|+ +++.++. |++||++. ++ ...+..+. ..+.+++|+|++..+
T Consensus 215 ~~~l~~-~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~---~~-~~~l~~~~-------~~~~~~~~spdg~~l 281 (415)
T 2hqs_A 215 VRQVAS-FPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS---GQ-IRQVTDGR-------SNNTEPTWFPDSQNL 281 (415)
T ss_dssp EEEEEC-CSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CC-EEECCCCS-------SCEEEEEECTTSSEE
T ss_pred EEEeec-CCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECCC---CC-EEeCcCCC-------CcccceEECCCCCEE
Confidence 444443 333 699999999 66666 6665555 99999977 33 34555443 679999999999876
Q ss_pred EEEEecCC--cEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecC---CeEEE
Q 019258 224 CLAGGSSG--TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSED---GILAV 298 (343)
Q Consensus 224 ~~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~d---g~i~~ 298 (343)
++++..+| .|++||+..+.. .. . ..|...+..++|+|++. .|++++.+ +.|++
T Consensus 282 ~~~s~~~g~~~i~~~d~~~~~~-~~-l----------~~~~~~~~~~~~spdG~----------~l~~~~~~~g~~~i~~ 339 (415)
T 2hqs_A 282 AFTSDQAGRPQVYKVNINGGAP-QR-I----------TWEGSQNQDADVSSDGK----------FMVMVSSNGGQQHIAK 339 (415)
T ss_dssp EEEECTTSSCEEEEEETTSSCC-EE-C----------CCSSSEEEEEEECTTSS----------EEEEEEECSSCEEEEE
T ss_pred EEEECCCCCcEEEEEECCCCCE-EE-E----------ecCCCcccCeEECCCCC----------EEEEEECcCCceEEEE
Confidence 65544456 677778876432 22 2 23567889999999988 57776654 47999
Q ss_pred EecCCCcccccccccccceeeecCCCCCeeEEccCCc---eEEEEe
Q 019258 299 VEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWE---SIAIVS 341 (343)
Q Consensus 299 ~~~~~~~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~---~i~~~~ 341 (343)
|+........+.....+.++.|+| +|+.|+.++.++ .|++|+
T Consensus 340 ~d~~~~~~~~l~~~~~~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 340 QDLATGGVQVLSSTFLDETPSLAP-NGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp EETTTCCEEECCCSSSCEEEEECT-TSSEEEEEEEETTEEEEEEEE
T ss_pred EECCCCCEEEecCCCCcCCeEEcC-CCCEEEEEEcCCCccEEEEEE
Confidence 998644333344444899999999 678888887666 788875
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=8.9e-20 Score=161.38 Aligned_cols=274 Identities=10% Similarity=0.114 Sum_probs=178.3
Q ss_pred CeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCC-CcEEEEEcc--Cceeeeeecc
Q 019258 35 KLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLS-GSLHVLSSA--MQVLLSVDEN 110 (343)
Q Consensus 35 ~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~d-g~v~v~~~~--~~~~~~~~~~ 110 (343)
.++++++.|+. +++|++........+..+.+...+.+++|+ ++++|++++.+ +.|.+|++. ......+...
T Consensus 6 ~l~~~~~~~~~-----v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 6 TVYIASPESQQ-----IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp EEEEEEGGGTE-----EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred EEEEeCCCCCe-----EEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc
Confidence 44555566654 779998543333344556677889999999 77878888776 999999997 3322222111
Q ss_pred CCccccCeEEEEec--CCEEEEEe-CCCcEEEEECCCCc--eEEEEEcCCCccceEEEEeCC-CCEEEEEe-CCCcEEEE
Q 019258 111 SGFHVGPISGVDLT--GSECVSVG-EDGRVNLVSVIGGG--EFKRVYDGNGLVGFNCVKWAS-PTEFVTGG-FGYGLQWW 183 (343)
Q Consensus 111 ~~~h~~~v~~~~~~--~~~~~s~s-~dg~v~~wd~~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~-~d~~i~iw 183 (343)
. .+ +.+..+.|+ ++.+++++ .++.|.+||+..+. ........+. .+.+++|+| ++.+++++ .++.|++|
T Consensus 81 ~-~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 81 A-LP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD--GCHSANISPDNRTLWVPALKQDRICLF 156 (343)
T ss_dssp E-CS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT--TBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred c-cC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC--CceEEEECCCCCEEEEecCCCCEEEEE
Confidence 1 12 267888888 77676555 58899999995321 2333443333 588999999 66677776 79999999
Q ss_pred EccccCCCCCee-----EEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCcee---eeee-cCCCCc
Q 019258 184 DLRRAGSGGPVL-----QFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQS---IVLS-GVGTGE 254 (343)
Q Consensus 184 d~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~---~~~~-~~~~~~ 254 (343)
|+.. ...+. .+....+ ..+..++|+|++..+++++..++.|.+||+...... .... ....
T Consensus 157 d~~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~-- 225 (343)
T 1ri6_A 157 TVSD---DGHLVAQDPAEVTTVEG------AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE-- 225 (343)
T ss_dssp EECT---TSCEEEEEEEEEECSTT------CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT--
T ss_pred EecC---CCceeeecccccccCCC------CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc--
Confidence 9976 23332 2222211 458899999999878777778999999999542111 1111 0000
Q ss_pred ccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC--Ccccc---cccccccceeeecCCCCCeeE
Q 019258 255 AVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE--EPFEL---LAEPCAINSFDIDPQNPSDVI 329 (343)
Q Consensus 255 ~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~--~~~~~---~~~~~~i~s~~~~~~~~~~l~ 329 (343)
.......+..++|+|++.. .+++++.|+.|.+|+... ..... ......+.+++++| +|++|+
T Consensus 226 ---~~~~~~~~~~i~~s~dg~~---------l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~ 292 (343)
T 1ri6_A 226 ---NFSDTRWAADIHITPDGRH---------LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDH-SGKYLI 292 (343)
T ss_dssp ---TCCSCCCEEEEEECTTSSE---------EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECT-TSSEEE
T ss_pred ---cccccCCccceEECCCCCE---------EEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECC-CCCEEE
Confidence 0011345778999999874 444667899999999762 21122 22234488999999 567777
Q ss_pred Ecc-CCceEEEEe
Q 019258 330 CSL-EWESIAIVS 341 (343)
Q Consensus 330 ~~~-~~~~i~~~~ 341 (343)
+++ +++.|.+|+
T Consensus 293 ~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 293 AAGQKSHHISVYE 305 (343)
T ss_dssp EECTTTCEEEEEE
T ss_pred EecCCCCeEEEEE
Confidence 766 678999984
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=8.7e-20 Score=157.60 Aligned_cols=245 Identities=16% Similarity=0.182 Sum_probs=170.4
Q ss_pred ceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccC-ceeeeeeccCCccccCeEEEEec--C
Q 019258 50 SLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAM-QVLLSVDENSGFHVGPISGVDLT--G 125 (343)
Q Consensus 50 ~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~-~~~~~~~~~~~~h~~~v~~~~~~--~ 125 (343)
.|++|++.... ......|.+.|.+++|+ ++.+|++++ ++.|++|++.. .+...+... .+...+.++.|+ +
T Consensus 23 ~i~~~d~~~~~---~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 23 SIEIFNIRTRK---MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG--FATICNNDHGISPDG 96 (297)
T ss_dssp EEEEEETTTTE---EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT--TCCCBCSCCEECTTS
T ss_pred eEEEEeCCCCc---eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc--cccccccceEECCCC
Confidence 48899996532 23344578899999999 778888775 88999999986 554433321 234678889998 8
Q ss_pred CEEEEEe--CCCcEEEEEC--CCCceEEEEEcCCCccceEEEEeCC-CCEEE-EEeCCCcEEEEEccccCCCCCeeEEec
Q 019258 126 SECVSVG--EDGRVNLVSV--IGGGEFKRVYDGNGLVGFNCVKWAS-PTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKG 199 (343)
Q Consensus 126 ~~~~s~s--~dg~v~~wd~--~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-t~~~d~~i~iwd~~~~~~~~~~~~~~~ 199 (343)
+.+++++ .++...+|.+ .++. .. .+..+. .+..++|+| +..++ +++.++.+++|++.. .......+..
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~-~~-~~~~~~--~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~--~~~~~~~~~~ 170 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGT-PR-LMTKNL--PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI--DSGVETRLTH 170 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCC-CE-ECCSSS--SEEEEEECTTSSEEEEEEEETTEEEEEEEET--TTCCEEECCC
T ss_pred CEEEEEEeCCCCcceEEEEECCCCc-eE-EeecCC--CccceEECCCCCEEEEEECCCCceEEEEEEC--CCCcceEccc
Confidence 8898888 4455666655 4442 33 333333 488899999 66665 777899999999865 2344444443
Q ss_pred ccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcC
Q 019258 200 NFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNI 279 (343)
Q Consensus 200 ~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 279 (343)
+. ..+.+++|+|++..+++++..++.+.+|++.......... ..|...+..+.|+|++.
T Consensus 171 ~~-------~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~----------~~~~~~~~~~~~s~dg~---- 229 (297)
T 2ojh_A 171 GE-------GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI----------TDSAYGDWFPHPSPSGD---- 229 (297)
T ss_dssp SS-------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC----------CCCSEEEEEEEECTTSS----
T ss_pred CC-------CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE----------ecCCcccCCeEECCCCC----
Confidence 33 6799999999998777666679999999987433333333 45677899999999987
Q ss_pred CCCCccceEEEecC-----------CeEEEEecCCCcc-ccc---ccccccceeeecCCCCCeeEEccCC
Q 019258 280 SSSRVLPAMFCSED-----------GILAVVEQGEEPF-ELL---AEPCAINSFDIDPQNPSDVICSLEW 334 (343)
Q Consensus 280 ~~~~~~~l~s~s~d-----------g~i~~~~~~~~~~-~~~---~~~~~i~s~~~~~~~~~~l~~~~~~ 334 (343)
.|++++.+ +.|++|+...... .+. .....+.++.|+| ++++|+.++++
T Consensus 230 ------~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~ 292 (297)
T 2ojh_A 230 ------KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSP-DGDEFAYVRYF 292 (297)
T ss_dssp ------EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCT-TSSEEEEEEEC
T ss_pred ------EEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECC-CCCEEEEEEec
Confidence 67777665 5699999754332 222 2346799999999 56777766654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=1.9e-18 Score=158.01 Aligned_cols=246 Identities=12% Similarity=0.068 Sum_probs=174.4
Q ss_pred CCeEEEEeecCCC-CCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCC---cEEEEEccCceeeeee
Q 019258 34 SKLAVLAIYDTDA-DSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSG---SLHVLSSAMQVLLSVD 108 (343)
Q Consensus 34 ~~~l~t~s~D~~~-~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg---~v~v~~~~~~~~~~~~ 108 (343)
+..++.++.+... ..-.|++|++.... ......|.+.|.+++|+ +++.|+.++.++ .|++||+...+...+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~---~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN---QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS---CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC---CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee
Confidence 6677777765321 11368899995422 23334577899999999 888999998875 9999999866544332
Q ss_pred ccCCccccCeEEEEec--CCEEE-EEeCCCc--EEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeC-CC--c
Q 019258 109 ENSGFHVGPISGVDLT--GSECV-SVGEDGR--VNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGF-GY--G 179 (343)
Q Consensus 109 ~~~~~h~~~v~~~~~~--~~~~~-s~s~dg~--v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~-d~--~ 179 (343)
.|.+.+.++.|+ ++.++ +++.|+. |.+||+.+++ ...+ ..+.. .+.+++|+| +..|++++. ++ .
T Consensus 220 ----~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-~~~l-~~~~~-~~~~~~~spdg~~l~~~s~~~g~~~ 292 (415)
T 2hqs_A 220 ----SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQV-TDGRS-NNTEPTWFPDSQNLAFTSDQAGRPQ 292 (415)
T ss_dssp ----CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EEEC-CCCSS-CEEEEEECTTSSEEEEEECTTSSCE
T ss_pred ----cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-EEeC-cCCCC-cccceEECCCCCEEEEEECCCCCcE
Confidence 366789999999 77677 6776665 9999998874 4444 33443 699999999 777887776 45 6
Q ss_pred EEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC--CcEEEEEccCCceeeeeecCCCCcccc
Q 019258 180 LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS--GTVFAWDLRWQQQSIVLSGVGTGEAVT 257 (343)
Q Consensus 180 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~ 257 (343)
|.+||+.. ++ ...+..+. ..+.+++|+|++..+++++..+ ..|++||+.+++. ..+
T Consensus 293 i~~~d~~~---~~-~~~l~~~~-------~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l---------- 350 (415)
T 2hqs_A 293 VYKVNING---GA-PQRITWEG-------SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVL---------- 350 (415)
T ss_dssp EEEEETTS---SC-CEECCCSS-------SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EEC----------
T ss_pred EEEEECCC---CC-EEEEecCC-------CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEe----------
Confidence 77778866 33 33343332 5688999999998776555443 5899999987543 222
Q ss_pred cCCccccEEEEEEeecCCCCcCCCCCccceEEEecCC---eEEEEecCCCcccccc-cccccceeeecCC
Q 019258 258 HSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG---ILAVVEQGEEPFELLA-EPCAINSFDIDPQ 323 (343)
Q Consensus 258 ~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg---~i~~~~~~~~~~~~~~-~~~~i~s~~~~~~ 323 (343)
..|. .+..++|+|++. .|++++.|+ .|++|+........+. ....|.+++|+|.
T Consensus 351 -~~~~-~~~~~~~spdg~----------~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 351 -SSTF-LDETPSLAPNGT----------MVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp -CCSS-SCEEEEECTTSS----------EEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred -cCCC-CcCCeEEcCCCC----------EEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccc
Confidence 2333 789999999988 677777776 7999997655444444 4578999999983
No 131
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=3.9e-19 Score=163.37 Aligned_cols=208 Identities=9% Similarity=-0.058 Sum_probs=147.5
Q ss_pred ccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCC-------C---C---CCCCccCCCCCCeeEEEcc-CCC
Q 019258 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLP-------A---S---LTPHSQWTPPTRISSLSTS-HQS 83 (343)
Q Consensus 18 ~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~-------~---~---~~~~~~~~~~~~v~~v~~~-~~~ 83 (343)
...++.++|+| ++.++++++.|+ +++|+.... . . ......+.+.+.|.+++|+ ++.
T Consensus 36 ~~~~n~lavs~----~~~~l~~~~~dg------v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 105 (434)
T 2oit_A 36 KERSSLLAVSN----KYGLVFAGGASG------LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL 105 (434)
T ss_dssp CSCCBCEEEET----TTTEEEEEETTE------EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC
T ss_pred CCCccEEEEec----CCCEEEEECCCE------EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC
Confidence 34689999999 778888887763 556654210 0 0 0112234567789999999 888
Q ss_pred eEE----EEcCCCcEEEEEccCc--------eeeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceE
Q 019258 84 LVA----ASTLSGSLHVLSSAMQ--------VLLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEF 148 (343)
Q Consensus 84 ~l~----~~s~dg~v~v~~~~~~--------~~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~ 148 (343)
+|+ +++.|+.|+|||+... +.+.......+|...|.+++|+ +..+++++.||+|++||++++...
T Consensus 106 ~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~ 185 (434)
T 2oit_A 106 TLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV 185 (434)
T ss_dssp EEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE
T ss_pred EEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce
Confidence 888 7788999999998743 2222233344699999999998 578999999999999999987433
Q ss_pred EEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEE
Q 019258 149 KRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
... ..|.. .+.+++|+| +..|++|+.|++|++||++. .....+..+......+...+.+++|++++..+++.+
T Consensus 186 ~~~-~~~~~-~v~~v~wspdg~~lasgs~dg~v~iwd~~~----~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 186 CAT-LPSTV-AVTSVCWSPKGKQLAVGKQNGTVVQYLPTL----QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp EEE-ECGGG-CEEEEEECTTSSCEEEEETTSCEEEECTTC----CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred eec-cCCCC-ceeEEEEcCCCCEEEEEcCCCcEEEEccCC----cccccccCCcccCCCCceeEEEEEEecCceEEEEEc
Confidence 333 34444 799999999 88999999999999999974 333334333211111124699999999876555555
Q ss_pred ecCCc------EEEEEccCC
Q 019258 228 GSSGT------VFAWDLRWQ 241 (343)
Q Consensus 228 ~~dg~------v~iwd~~~~ 241 (343)
+.||. +++||+++.
T Consensus 260 ~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 260 AADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ETTCCSSSCCEEEEEECCCT
T ss_pred cCCCccCCCCceEEEEeccC
Confidence 56644 899999864
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.84 E-value=1.2e-18 Score=164.52 Aligned_cols=291 Identities=11% Similarity=0.068 Sum_probs=200.1
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-----CCCeE
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-----HQSLV 85 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-----~~~~l 85 (343)
.+.+++....+..++++| ++++|++++.|+ +|.+||+.. ...+++..+.+...+..++|+ ++++|
T Consensus 171 ~~~~i~~g~~~~~v~~sp----dg~~l~v~~~d~-----~V~v~D~~~-~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l 240 (543)
T 1nir_A 171 IVKVIDTGYAVHISRMSA----SGRYLLVIGRDA-----RIDMIDLWA-KEPTKVAEIKIGIEARSVESSKFKGYEDRYT 240 (543)
T ss_dssp EEEEEECSTTEEEEEECT----TSCEEEEEETTS-----EEEEEETTS-SSCEEEEEEECCSEEEEEEECCSTTCTTTEE
T ss_pred EEEEEecCcccceEEECC----CCCEEEEECCCC-----eEEEEECcC-CCCcEEEEEecCCCcceEEeCCCcCCCCCEE
Confidence 455555445588999999 899999999884 377999931 113345556666778999998 46788
Q ss_pred EEEcC-CCcEEEEEccCceeeeeeccCC-------cccc-CeEEEEec---CCEEEEEeCCCcEEEEECCCCceEE-EEE
Q 019258 86 AASTL-SGSLHVLSSAMQVLLSVDENSG-------FHVG-PISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFK-RVY 152 (343)
Q Consensus 86 ~~~s~-dg~v~v~~~~~~~~~~~~~~~~-------~h~~-~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~-~~~ 152 (343)
++++. +++|.+||..+.+.+....... .|.. .+.++.++ ...+++...++.|.+||+.+.+.+. ..+
T Consensus 241 ~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i 320 (543)
T 1nir_A 241 IAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI 320 (543)
T ss_dssp EEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE
T ss_pred EEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe
Confidence 88874 8999999988666554443210 1333 68888887 3456778899999999998754332 222
Q ss_pred cCCCccceEEEEeCC-CCEEEEEe-CCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe-c
Q 019258 153 DGNGLVGFNCVKWAS-PTEFVTGG-FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG-S 229 (343)
Q Consensus 153 ~~~~~~~v~~~~~~~-~~~l~t~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~-~ 229 (343)
. +.. .+.++.|+| +.++++++ .+++|.+||+.+ ++.+..+..... .|.+....+ ++|++..+++++. .
T Consensus 321 ~-~~~-~~~~~~~spdg~~l~va~~~~~~v~v~D~~t---g~l~~~i~~g~~---ph~g~g~~~-~~p~~g~~~~s~~~~ 391 (543)
T 1nir_A 321 G-AAP-FLHDGGWDSSHRYFMTAANNSNKVAVIDSKD---RRLSALVDVGKT---PHPGRGANF-VHPKYGPVWSTSHLG 391 (543)
T ss_dssp E-CCS-SCCCEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSSS---BCCTTCEEE-EETTTEEEEEEEBSS
T ss_pred c-cCc-CccCceECCCCCEEEEEecCCCeEEEEECCC---CeEEEeeccCCC---CCCCCCccc-CCCCCccEEEeccCC
Confidence 2 333 588899999 66565554 589999999988 666666653210 011223333 5787666777776 6
Q ss_pred CCcEEEEEccCC------ceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-------cCCeE
Q 019258 230 SGTVFAWDLRWQ------QQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-------EDGIL 296 (343)
Q Consensus 230 dg~v~iwd~~~~------~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-------~dg~i 296 (343)
|++|.+||+... -+.+..+ ..|.+.+..|+|+|+++ .|++++ .+++|
T Consensus 392 d~~V~v~d~~~~~~~~~~~~~v~~l----------~~~g~~~~~v~~~pdg~----------~l~v~~~~~~~~~~~~~v 451 (543)
T 1nir_A 392 DGSISLIGTDPKNHPQYAWKKVAEL----------QGQGGGSLFIKTHPKSS----------HLYVDTTFNPDARISQSV 451 (543)
T ss_dssp SSEEEEEECCTTTCTTTBTSEEEEE----------ECSCSCCCCEECCTTCC----------EEEECCTTCSSHHHHTCE
T ss_pred CceEEEEEeCCCCCchhcCeEEEEE----------EcCCCCceEEEcCCCCC----------cEEEecCCCCCcccCceE
Confidence 899999999762 1222333 45677888999999988 688877 37899
Q ss_pred EEEecCCC--ccccc--------cc-ccccceeeecCCCCCeeEEc-----cCCceEEEEe
Q 019258 297 AVVEQGEE--PFELL--------AE-PCAINSFDIDPQNPSDVICS-----LEWESIAIVS 341 (343)
Q Consensus 297 ~~~~~~~~--~~~~~--------~~-~~~i~s~~~~~~~~~~l~~~-----~~~~~i~~~~ 341 (343)
.+||.... ..+.+ .+ ...+..+++++ +|+.|..+ +++++|.||+
T Consensus 452 ~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~g~~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 452 AVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNK-RGDEVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp EEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECS-SSSEEEEEEECCTTSCCEEEEEE
T ss_pred EEEECCCCCCCeEEeechhhcccCCCCCceEeccCCC-CCCEEEEEeecCCCCCCeEEEEE
Confidence 99997532 22332 22 45789999999 57888754 3468999986
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=4.6e-18 Score=151.13 Aligned_cols=285 Identities=9% Similarity=0.001 Sum_probs=192.5
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCC--CCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCe-EE
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDA--DSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSL-VA 86 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~--~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~-l~ 86 (343)
.+...+....+..++|+| +++++++++.++.. +.-.|++|+.... +....+.....+.++.|+ +++. ++
T Consensus 33 ~~~~~~~~~~~~~~~~s~----dg~~l~~~~~~~~~~~~~~~v~~~d~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~v 105 (353)
T 3vgz_A 33 EMLRKAVGKGAYEMAYSQ----QENALWLATSQSRKLDKGGVVYRLDPVTL---EVTQAIHNDLKPFGATINNTTQTLWF 105 (353)
T ss_dssp CEEEEEEESSEEEEEEET----TTTEEEEEECCCTTTEESEEEEEECTTTC---CEEEEEEESSCCCSEEEETTTTEEEE
T ss_pred hhhhhhhccCccceEECC----CCCEEEEEcCCCcCCCCCccEEEEcCCCC---eEEEEEecCCCcceEEECCCCCEEEE
Confidence 456667778899999999 77777777755310 0125789998542 233344445567889998 6664 45
Q ss_pred EEcCCCcEEEEEccCceeeeeeccCCccc------cCeEEEEec--CCEEEEEe--CCCcEEEEECCCCceEEEEEcCCC
Q 019258 87 ASTLSGSLHVLSSAMQVLLSVDENSGFHV------GPISGVDLT--GSECVSVG--EDGRVNLVSVIGGGEFKRVYDGNG 156 (343)
Q Consensus 87 ~~s~dg~v~v~~~~~~~~~~~~~~~~~h~------~~v~~~~~~--~~~~~s~s--~dg~v~~wd~~~~~~~~~~~~~~~ 156 (343)
+...++.|.+||....+.+.......... ....++.++ ++.++.++ .++.|.+||..+++ ....+..+.
T Consensus 106 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~ 184 (353)
T 3vgz_A 106 GNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK-LKTAIQNTG 184 (353)
T ss_dssp EETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE-EEEEECCCC
T ss_pred EecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc-eEEEecCCC
Confidence 55668999999998665443333211110 126788887 67666554 58899999999885 555544233
Q ss_pred ccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEE
Q 019258 157 LVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235 (343)
Q Consensus 157 ~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~i 235 (343)
. .+.++.|+| ++.+++++.++.|.+||+.. ++....+..... . ....+..++|+|++..++++...++.|.+
T Consensus 185 ~-~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~---~~~~~~~~~~~~-~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~ 257 (353)
T 3vgz_A 185 K-MSTGLALDSEGKRLYTTNADGELITIDTAD---NKILSRKKLLDD-G--KEHFFINISLDTARQRAFITDSKAAEVLV 257 (353)
T ss_dssp T-TCCCCEEETTTTEEEEECTTSEEEEEETTT---TEEEEEEECCCS-S--SCCCEEEEEEETTTTEEEEEESSSSEEEE
T ss_pred C-ccceEEECCCCCEEEEEcCCCeEEEEECCC---CeEEEEEEcCCC-C--CCcccceEEECCCCCEEEEEeCCCCEEEE
Confidence 2 478889999 77888899999999999988 665555543211 0 11458889999999888777777799999
Q ss_pred EEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-cccccccccc
Q 019258 236 WDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFELLAEPCA 314 (343)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~~~~~~~ 314 (343)
||+.+++....+. ... -..++|+|++.. .+++...++.|.+|+.... ..........
T Consensus 258 ~d~~~~~~~~~~~----------~~~---~~~~~~s~dg~~---------l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 315 (353)
T 3vgz_A 258 VDTRNGNILAKVA----------APE---SLAVLFNPARNE---------AYVTHRQAGKVSVIDAKSYKVVKTFDTPTH 315 (353)
T ss_dssp EETTTCCEEEEEE----------CSS---CCCEEEETTTTE---------EEEEETTTTEEEEEETTTTEEEEEEECCSE
T ss_pred EECCCCcEEEEEE----------cCC---CceEEECCCCCE---------EEEEECCCCeEEEEECCCCeEEEEEecCCC
Confidence 9998765443333 111 256999999874 4555567999999997533 3333334456
Q ss_pred cceeeecCCCCCeeEEccC
Q 019258 315 INSFDIDPQNPSDVICSLE 333 (343)
Q Consensus 315 i~s~~~~~~~~~~l~~~~~ 333 (343)
..+++++| +|++|+.+..
T Consensus 316 ~~~~~~s~-dg~~l~v~~~ 333 (353)
T 3vgz_A 316 PNSLALSA-DGKTLYVSVK 333 (353)
T ss_dssp EEEEEECT-TSCEEEEEEE
T ss_pred CCeEEEcC-CCCEEEEEEc
Confidence 78999998 5565555443
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=7.4e-18 Score=148.96 Aligned_cols=258 Identities=10% Similarity=0.081 Sum_probs=166.3
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCC-CCCCCCccCCCCCCeeEEEcc-CCCeEEEE
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLP-ASLTPHSQWTPPTRISSLSTS-HQSLVAAS 88 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~-~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~ 88 (343)
.+..+++...+..++|+| +++++++++.+. + .+.+|++... .....+..+...+.+..++|+ +++.|+++
T Consensus 30 ~~~~~~~~~~~~~~~~sp----dg~~l~~~~~~~--~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 101 (343)
T 1ri6_A 30 LTQVVDVPGQVQPMVVSP----DKRYLYVGVRPE--F--RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVG 101 (343)
T ss_dssp EEEEEECSSCCCCEEECT----TSSEEEEEETTT--T--EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEE
T ss_pred EeeeEecCCCCceEEECC----CCCEEEEeecCC--C--eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEE
Confidence 344556777899999999 888888887762 1 4779998521 222233344445588999999 77766655
Q ss_pred c-CCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEe-CCCcEEEEECCC-CceEEE----EEcCCCccc
Q 019258 89 T-LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVG-EDGRVNLVSVIG-GGEFKR----VYDGNGLVG 159 (343)
Q Consensus 89 s-~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s-~dg~v~~wd~~~-~~~~~~----~~~~~~~~~ 159 (343)
+ .++.|.+|++............ .....+.++.|+ ++.+++++ .++.|.+||+.+ ++ ... ....+....
T Consensus 102 ~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~ 179 (343)
T 1ri6_A 102 SYNAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH-LVAQDPAEVTTVEGAG 179 (343)
T ss_dssp ETTTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC-EEEEEEEEEECSTTCC
T ss_pred ecCCCeEEEEECCCCccccccccc-cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc-eeeecccccccCCCCC
Confidence 5 5889999999422222111111 122357888888 67777766 899999999987 53 322 122222226
Q ss_pred eEEEEeCC-CCEEEEE-eCCCcEEEEEccccCCCCC--eeEEecccC-CCCCcccCeEEEEEcCCCCeEEEEEecCCcEE
Q 019258 160 FNCVKWAS-PTEFVTG-GFGYGLQWWDLRRAGSGGP--VLQFKGNFG-SQGKASGMIHSVDIHPSRKHTCLAGGSSGTVF 234 (343)
Q Consensus 160 v~~~~~~~-~~~l~t~-~~d~~i~iwd~~~~~~~~~--~~~~~~~~~-~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~ 234 (343)
+.+++|+| +..++.+ ..++.|.+||+... .+.. ...+..... ..+ ...+..++|+|++..+++++..++.|.
T Consensus 180 ~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~~~--~~~~~~i~~s~dg~~l~v~~~~~~~i~ 256 (343)
T 1ri6_A 180 PRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNIECVQTLDMMPENFSD--TRWAADIHITPDGRHLYACDRTASLIT 256 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCCEEEEEEECSCTTCCS--CCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEeeccccCccccc--cCCccceEECCCCCEEEEEecCCCEEE
Confidence 88999999 6655544 47999999999540 1222 222221110 010 135778999999988877777899999
Q ss_pred EEEccC--Cc-eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-cCCeEEEEecC
Q 019258 235 AWDLRW--QQ-QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-EDGILAVVEQG 302 (343)
Q Consensus 235 iwd~~~--~~-~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-~dg~i~~~~~~ 302 (343)
+||++. .. ...... ..+ ..+..++|+|++. .|++++ .++.|.+|+.+
T Consensus 257 v~d~~~~~~~~~~~~~~----------~~~-~~~~~~~~s~dg~----------~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 257 VFSVSEDGSVLSKEGFQ----------PTE-TQPRGFNVDHSGK----------YLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEECTTSCCEEEEEEE----------ECS-SSCCCEEECTTSS----------EEEEECTTTCEEEEEEEE
T ss_pred EEEEcCCCCceEEeeee----------cCC-CccceEEECCCCC----------EEEEecCCCCeEEEEEEc
Confidence 999973 11 222222 222 2388999999987 566665 78999999543
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.82 E-value=3.6e-17 Score=144.28 Aligned_cols=267 Identities=8% Similarity=0.021 Sum_probs=173.0
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCC-CCCCeeEEEcc-CCCeEEEEcC-CCcEEEEEccCcee-eeee
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWT-PPTRISSLSTS-HQSLVAASTL-SGSLHVLSSAMQVL-LSVD 108 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~-~~~~v~~v~~~-~~~~l~~~s~-dg~v~v~~~~~~~~-~~~~ 108 (343)
.+..+++++.++. |.+|++..... ...+. +...+ .++|+ +++.+++++. ++.|.+||....+. ....
T Consensus 9 ~~~~~v~~~~~~~-----v~~~d~~~~~~---~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 9 SNFGIVVEQHLRR-----ISFFSTDTLEI---LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp CCEEEEEEGGGTE-----EEEEETTTCCE---EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred CCEEEEEecCCCe-----EEEEeCcccce---eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 4566778877754 77999865322 22222 23445 99999 7775655554 89999999985543 2222
Q ss_pred ccCCccccCeEEEEec--CCEEEEEeCCC---cEEEEECCCCceEEEEEcCCCccceEEEEeCC-CC-EEEEEeCCCc-E
Q 019258 109 ENSGFHVGPISGVDLT--GSECVSVGEDG---RVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PT-EFVTGGFGYG-L 180 (343)
Q Consensus 109 ~~~~~h~~~v~~~~~~--~~~~~s~s~dg---~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~t~~~d~~-i 180 (343)
. .+..++.++.++ ++.++++..++ .|.+||+.+++ ....+..+. ...+++|+| ++ .+++...++. |
T Consensus 80 ~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 80 Q---EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-FISTIPIPY--DAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp E---ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE-EEEEEECCT--TEEEEEECTTSSCEEEEEETTTTEE
T ss_pred c---cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC-eEEEEECCC--CccceEECCCCCEEEEEecCCCceE
Confidence 1 244555558887 77788554443 89999999885 454544444 478999999 54 4555566688 9
Q ss_pred EEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCce---eeeeecCCCCcccc
Q 019258 181 QWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ---SIVLSGVGTGEAVT 257 (343)
Q Consensus 181 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~ 257 (343)
.+|++.. ...+.......- . .......++|+|++..+++++..++.|.+||+++.+. ...+.
T Consensus 154 ~~~~~~~---~g~~~~~~~~~~-~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--------- 218 (331)
T 3u4y_A 154 RRFKIDA---DGVLFDTGQEFI-S--GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--------- 218 (331)
T ss_dssp EEEEECT---TCCEEEEEEEEE-C--SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE---------
T ss_pred EEEEECC---CCcEeecCCccc-c--CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc---------
Confidence 9999976 333322110000 0 0145789999999988888888899999999987654 32222
Q ss_pred cCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccccc--------cccc---ccceeeecCCCCC
Q 019258 258 HSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELL--------AEPC---AINSFDIDPQNPS 326 (343)
Q Consensus 258 ~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~--------~~~~---~i~s~~~~~~~~~ 326 (343)
....+..++|+|++.. .+++...++.|.+|+......+.. ..+. ..++++++| +++
T Consensus 219 ---~~~~~~~~~~spdg~~---------l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~ 285 (331)
T 3u4y_A 219 ---TNNLPGTIVVSRDGST---------VYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNK-TET 285 (331)
T ss_dssp ---CSSCCCCEEECTTSSE---------EEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECT-TSS
T ss_pred ---CCCCCceEEECCCCCE---------EEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECC-CCC
Confidence 2356788999999884 344555678899999754322100 1111 236689999 557
Q ss_pred ee-EEccCCceEEEEeC
Q 019258 327 DV-ICSLEWESIAIVSR 342 (343)
Q Consensus 327 ~l-~~~~~~~~i~~~~~ 342 (343)
+| +++.+++.|.+|+-
T Consensus 286 ~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 286 KLFISANISRELKVFTI 302 (331)
T ss_dssp EEEEEETTTTEEEEEET
T ss_pred EEEEecCCCCcEEEEEe
Confidence 66 55556679999873
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.82 E-value=2.6e-18 Score=168.25 Aligned_cols=283 Identities=9% Similarity=0.002 Sum_probs=184.9
Q ss_pred ccceeeEEecCCCCCCCCeEEEEee-cCCCCCCceeeeeCCCCCCCCCCccCCCC----------------------CCe
Q 019258 18 SKYIDAVRWLPPLSPLSKLAVLAIY-DTDADSPSLETHSISLPASLTPHSQWTPP----------------------TRI 74 (343)
Q Consensus 18 ~~~i~~v~w~p~~~~~~~~l~t~s~-D~~~~~~~l~~w~~~~~~~~~~~~~~~~~----------------------~~v 74 (343)
...|..++|+| ++++|++++. |+......|++|++...........-.+. ..|
T Consensus 36 ~~~~~~~~~Sp----dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAP----DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECT----TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEES
T ss_pred CCCCCCceEec----CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 56799999999 9999999998 75322335889999653221111111111 237
Q ss_pred eEEEcc-CCCeEEEEcCCCcEEEEEccCc---eeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceE
Q 019258 75 SSLSTS-HQSLVAASTLSGSLHVLSSAMQ---VLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEF 148 (343)
Q Consensus 75 ~~v~~~-~~~~l~~~s~dg~v~v~~~~~~---~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~ 148 (343)
.+++|+ +++.|++++. +.|++|++... +... ...|...+..+.|+ |+.++.++. +.|.+||+.+++ .
T Consensus 112 ~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~----l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~-~ 184 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQ----LTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGR-Q 184 (741)
T ss_dssp CCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCB----CCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTE-E
T ss_pred ceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEE----cccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCC-E
Confidence 899999 8888888876 99999999855 3222 22467789999999 788888774 589999999874 4
Q ss_pred EEEEcCCCcc---------------ceEEEEeCC-CCEEEEEeCCC---------------------------------c
Q 019258 149 KRVYDGNGLV---------------GFNCVKWAS-PTEFVTGGFGY---------------------------------G 179 (343)
Q Consensus 149 ~~~~~~~~~~---------------~v~~~~~~~-~~~l~t~~~d~---------------------------------~ 179 (343)
..+...+... .+..+.|+| +..|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 4443332210 147799999 77788887765 7
Q ss_pred EEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe----cCCcEEEEEccCCceeeeeecCCCCcc
Q 019258 180 LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG----SSGTVFAWDLRWQQQSIVLSGVGTGEA 255 (343)
Q Consensus 180 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~----~dg~v~iwd~~~~~~~~~~~~~~~~~~ 255 (343)
|.+||+.. ......+..... +...+..++| |++..+++++. .+..|++||+.+++....+.
T Consensus 265 l~~~d~~~---~~~~~~~~~~~~----~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~------- 329 (741)
T 2ecf_A 265 LGVISPAE---QAQTQWIDLGKE----QDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH------- 329 (741)
T ss_dssp EEEECSST---TCCCEEECCCSC----SSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE-------
T ss_pred EEEEECCC---CCceEEecCCCC----cceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE-------
Confidence 88888744 122333321111 1166999999 99987765544 35689999998865433322
Q ss_pred cccCCccc----cEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEE--ecCCCccccccccccccee-eecCCCCCee
Q 019258 256 VTHSLSES----EVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVV--EQGEEPFELLAEPCAINSF-DIDPQNPSDV 328 (343)
Q Consensus 256 ~~~~~h~~----~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~--~~~~~~~~~~~~~~~i~s~-~~~~~~~~~l 328 (343)
.+.. .+..++|+|++. .+++++.||.+.+| +.......+......+.++ .++| +++.|
T Consensus 330 ----~~~~~~~~~~~~~~~spdg~----------~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~-dg~~l 394 (741)
T 2ecf_A 330 ----ETSPTWVPLHNSLRFLDDGS----------ILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDE-KAGLA 394 (741)
T ss_dssp ----EECSSCCCCCSCCEECTTSC----------EEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEET-TTTEE
T ss_pred ----cCCCCcCCcCCceEECCCCe----------EEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeC-CCCEE
Confidence 1221 456899999987 68888899865555 4333333333344567776 5898 45655
Q ss_pred -EEccCCc--eEEEEe
Q 019258 329 -ICSLEWE--SIAIVS 341 (343)
Q Consensus 329 -~~~~~~~--~i~~~~ 341 (343)
+++++++ .+++|.
T Consensus 395 ~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 395 YFRAGIESARESQIYA 410 (741)
T ss_dssp EEEECSSCTTCBEEEE
T ss_pred EEEEeCCCCceEEEEE
Confidence 4555554 666664
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=3.9e-18 Score=166.15 Aligned_cols=277 Identities=12% Similarity=0.028 Sum_probs=185.9
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEE
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVL 97 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~ 97 (343)
..|..++|+| + ..++.+ .|+ .+++|++.... +.....+.+.+.+++|+ +++.|+.+ .++.|++|
T Consensus 82 ~~v~~~~~sp----d-~~~~~~-~~~-----~i~~~d~~~~~---~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~ 146 (706)
T 2z3z_A 82 FPSFRTLDAG----R-GLVVLF-TQG-----GLVGFDMLARK---VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIA 146 (706)
T ss_dssp CCCEEEEETT----T-TEEEEE-ETT-----EEEEEETTTTE---EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEE
T ss_pred cCceeEEECC----C-CeEEEE-ECC-----EEEEEECCCCc---eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEE
Confidence 5699999999 6 555544 343 48899995532 22334556778999999 78888774 78999999
Q ss_pred EccC-----ceeeeeeccCCcccc--------------CeEEEEec--CCEEEEEe------------------------
Q 019258 98 SSAM-----QVLLSVDENSGFHVG--------------PISGVDLT--GSECVSVG------------------------ 132 (343)
Q Consensus 98 ~~~~-----~~~~~~~~~~~~h~~--------------~v~~~~~~--~~~~~s~s------------------------ 132 (343)
++.. .+...+.. .+.. .+.++.|+ ++.|++++
T Consensus 147 ~~~~~~~~~g~~~~~~~---~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 147 RGGKLGEGMSRAIAVTI---DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp ECBCTTSCCCCCEESCS---CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred ecCcccccCCCcEEecc---CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 9986 55443322 1222 24788998 88898887
Q ss_pred ---------CCCcEEEEECCCCceEEEEEc--CCCccceEEEEeCC-CCEEEEEeCCC-----cEEEEEccccCCCCCee
Q 019258 133 ---------EDGRVNLVSVIGGGEFKRVYD--GNGLVGFNCVKWAS-PTEFVTGGFGY-----GLQWWDLRRAGSGGPVL 195 (343)
Q Consensus 133 ---------~dg~v~~wd~~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~l~t~~~d~-----~i~iwd~~~~~~~~~~~ 195 (343)
.+..|.+||+.+++ ...+.. .+.. .+.+++|+| +..+++++.++ .|.+||+.. ++...
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~---g~~~~ 298 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGK-TVYLQTGEPKEK-FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET---GRFVR 298 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTE-EEECCCCSCTTC-EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT---CCEEE
T ss_pred eCCCCCCCCCeeEEEEEECCCCc-eEeeccCCCCce-eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC---Cceee
Confidence 45779999999874 444332 2333 689999999 77788877775 999999987 53444
Q ss_pred EEecccCCCCCcccCeEEEEEcC--CCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEE-EEEee
Q 019258 196 QFKGNFGSQGKASGMIHSVDIHP--SRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWE-VQYDC 272 (343)
Q Consensus 196 ~~~~~~~~~~~~~~~i~~v~~~p--~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~~p 272 (343)
.+......... ..+..++|+| ++. ++++++.||.+++|++.........+ ..|...+.. ++|+|
T Consensus 299 ~~~~~~~~~~~--~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l----------~~~~~~v~~~~~~sp 365 (706)
T 2z3z_A 299 TLFVETDKHYV--EPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQV----------TKGEWEVTNFAGFDP 365 (706)
T ss_dssp EEEEEECSSCC--CCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEEC----------CCSSSCEEEEEEECT
T ss_pred EEEEccCCCeE--CccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEec----------CCCCeEEEeeeEEcC
Confidence 43321110000 1246789999 886 66788889999999886323333333 345667776 79999
Q ss_pred cCCCCcCCCCCccceEEEecCC----eEEEEecCCCcccccccccccceeeecCCCCCeeEEccCC----ceEEEEe
Q 019258 273 HTKSSNISSSRVLPAMFCSEDG----ILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEW----ESIAIVS 341 (343)
Q Consensus 273 ~~~~~~~~~~~~~~l~s~s~dg----~i~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~----~~i~~~~ 341 (343)
++.. .+++++.++ .|+.|+........+.....+.+++++| +|++++.+.++ ..|++|+
T Consensus 366 dg~~---------l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~sp-dg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 366 KGTR---------LYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSP-DGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp TSSE---------EEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECT-TSSEEEEEEECSSCSCEEEEEE
T ss_pred CCCE---------EEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECC-CCCEEEEEecCCCCCcEEEEEE
Confidence 9874 344555555 6778876544344445556788999999 56777765433 4588886
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.81 E-value=1.6e-17 Score=156.74 Aligned_cols=268 Identities=9% Similarity=-0.030 Sum_probs=183.0
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEc--cCceeeeeec
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLSS--AMQVLLSVDE 109 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~--~~~~~~~~~~ 109 (343)
++.++++++.|+. +.+||... .+++..+.....+..+.|+ ++++|++++.|+.|++||+ .+.+.+....
T Consensus 148 ~~~~~vs~~~d~~-----V~v~D~~t---~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 148 PNLFSVTLRDAGQ-----IALVDGDS---KKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp GGEEEEEEGGGTE-----EEEEETTT---CCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred CCEEEEEEcCCCe-----EEEEECCC---ceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 6788888888864 77999854 2334444433348899999 8899999999999999999 5544433322
Q ss_pred cCCccccCeEEEEec------CCEEEEEe-CCCcEEEEECCCCceEEEEEcCC----------CccceEEEEeCC--CCE
Q 019258 110 NSGFHVGPISGVDLT------GSECVSVG-EDGRVNLVSVIGGGEFKRVYDGN----------GLVGFNCVKWAS--PTE 170 (343)
Q Consensus 110 ~~~~h~~~v~~~~~~------~~~~~s~s-~dg~v~~wd~~~~~~~~~~~~~~----------~~~~v~~~~~~~--~~~ 170 (343)
+......+.++ ++++++++ .+++|.+||..+.+ +...+..+ ....+.++.+++ ...
T Consensus 220 ----~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~-~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 220 ----IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE-PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp ----CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred ----cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc-cceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 22345777775 56777777 58999999999875 44443321 122588899998 445
Q ss_pred EEEEeCCCcEEEEEccccCCCCCee--EEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeee
Q 019258 171 FVTGGFGYGLQWWDLRRAGSGGPVL--QFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248 (343)
Q Consensus 171 l~t~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~ 248 (343)
+++...+++|.+||+.. .+.+. .+. +. ..+..+.|+|+++++++++..+++|.+||+++++....+.
T Consensus 295 ~vs~~~~g~i~vvd~~~---~~~l~~~~i~-~~-------~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKD---IDNLTVTSIG-AA-------PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp EEEETTTTEEEEEECTT---SSSCEEEEEE-CC-------SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCeEEEEEecC---CCcceeEEec-cC-------cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeec
Confidence 66777799999999987 44433 332 21 5588899999999888777789999999999865433332
Q ss_pred cCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-cCCeEEEEecCCC--------c-cccccccccccee
Q 019258 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-EDGILAVVEQGEE--------P-FELLAEPCAINSF 318 (343)
Q Consensus 249 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-~dg~i~~~~~~~~--------~-~~~~~~~~~i~s~ 318 (343)
.+ ...|.+....+ ++|++.. .+++++ .|++|.+|+...+ . .++......+..+
T Consensus 364 -~g------~~ph~g~g~~~-~~p~~g~---------~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v 426 (543)
T 1nir_A 364 -VG------KTPHPGRGANF-VHPKYGP---------VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFI 426 (543)
T ss_dssp -CS------SSBCCTTCEEE-EETTTEE---------EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE
T ss_pred -cC------CCCCCCCCccc-CCCCCcc---------EEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEE
Confidence 11 02355443333 5776443 556665 6899999987541 1 1222223567889
Q ss_pred eecCCCCCeeEEcc----C---CceEEEEeC
Q 019258 319 DIDPQNPSDVICSL----E---WESIAIVSR 342 (343)
Q Consensus 319 ~~~~~~~~~l~~~~----~---~~~i~~~~~ 342 (343)
.++| ++++|.+++ + ++.|.+|+.
T Consensus 427 ~~~p-dg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 427 KTHP-KSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp ECCT-TCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred EcCC-CCCcEEEecCCCCCcccCceEEEEEC
Confidence 9999 679999887 1 668999874
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=3.3e-18 Score=167.00 Aligned_cols=281 Identities=12% Similarity=0.043 Sum_probs=178.9
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCC-CC---CeeEEEcc-CCCeEEEEcCC--
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTP-PT---RISSLSTS-HQSLVAASTLS-- 91 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~-~~---~v~~v~~~-~~~~l~~~s~d-- 91 (343)
.++..++|+| +++++++ +.|+ .|++|++..... ...+.+ .. .|.+++|+ ++++|++++.+
T Consensus 17 ~~~~~~~~sp----dg~~~~~-~~dg-----~i~~~d~~~g~~---~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~ 83 (723)
T 1xfd_A 17 IHDPEAKWIS----DTEFIYR-EQKG-----TVRLWNVETNTS---TVLIEGKKIESLRAIRYEISPDREYALFSYNVEP 83 (723)
T ss_dssp CCCCCCCBSS----SSCBCCC-CSSS-----CEEEBCGGGCCC---EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC
T ss_pred ccccccEEcC----CCcEEEE-eCCC-----CEEEEECCCCcE---EEEeccccccccccceEEECCCCCEEEEEecCcc
Confidence 4578899999 7777665 5564 388999955322 222222 22 48999999 88889888764
Q ss_pred -------CcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc-c---
Q 019258 92 -------GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL-V--- 158 (343)
Q Consensus 92 -------g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~-~--- 158 (343)
+.+.+|++...+...+. ....|...+..+.|+ |+.++.++. +.|.+||+.++. ...+...+.. .
T Consensus 84 ~~~~~~~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~-~~~~~~~~~~~~~~~ 160 (723)
T 1xfd_A 84 IYQHSYTGYYVLSKIPHGDPQSLD-PPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQ-AIRVVSTGKEGVIYN 160 (723)
T ss_dssp CSSSCCCSEEEEEESSSCCCEECC-CTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSC-CEEEECCCBTTTEEE
T ss_pred ceeecceeeEEEEECCCCceEecc-CCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCc-eEEEecCCCCCceEC
Confidence 78889999865542222 222455568888998 888888886 789999998874 4444443221 0
Q ss_pred -------------ceEEEEeCC-CCEEEEEeCCC----------------------------------cEEEEEccccCC
Q 019258 159 -------------GFNCVKWAS-PTEFVTGGFGY----------------------------------GLQWWDLRRAGS 190 (343)
Q Consensus 159 -------------~v~~~~~~~-~~~l~t~~~d~----------------------------------~i~iwd~~~~~~ 190 (343)
.+.+++|+| ++.|++++.|+ .|++||+..
T Consensus 161 g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~--- 237 (723)
T 1xfd_A 161 GLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG--- 237 (723)
T ss_dssp EECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS---
T ss_pred cccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC---
Confidence 237899999 77888887653 789999977
Q ss_pred CCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEec----CCcEEEEEccCCceeeeeecCCCCcccccCCccccEE
Q 019258 191 GGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS----SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVW 266 (343)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 266 (343)
++....+..+.... .+...+..++|+|++..+ ++... +..|++||+.+++....+. ..+...+.
T Consensus 238 ~~~~~~l~~~~~~~-~~~~~~~~~~~SpDg~~l-~~~~~~~~~~~~i~~~d~~~g~~~~~~~----------~~~~~~~~ 305 (723)
T 1xfd_A 238 PTHDLEMMPPDDPR-MREYYITMVKWATSTKVA-VTWLNRAQNVSILTLCDATTGVCTKKHE----------DESEAWLH 305 (723)
T ss_dssp SCCCEECCCCCCGG-GSSEEEEEEEESSSSEEE-EEEEETTSCEEEEEEEETTTCCEEEEEE----------EECSSCCC
T ss_pred CceeEEeeCCccCC-CccceeEEEEEeCCCeEE-EEEEcCCCCeEEEEEEeCCCCcceEEEE----------eccCCEEe
Confidence 44444444321000 001568999999998754 44432 3579999998765433322 12333333
Q ss_pred ----EEEEeecCCCCcCCCCCccceEE--EecCC------eEEEEe-cC-CC---cccccccccccce-eeecCCCCCee
Q 019258 267 ----EVQYDCHTKSSNISSSRVLPAMF--CSEDG------ILAVVE-QG-EE---PFELLAEPCAINS-FDIDPQNPSDV 328 (343)
Q Consensus 267 ----~v~~~p~~~~~~~~~~~~~~l~s--~s~dg------~i~~~~-~~-~~---~~~~~~~~~~i~s-~~~~~~~~~~l 328 (343)
.++|+|++. .|+. ...|| .|++|+ .. .. ...+......+.+ +.|+| +|+.|
T Consensus 306 ~~~~~~~~spdg~----------~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~sp-dg~~l 374 (723)
T 1xfd_A 306 RQNEEPVFSKDGR----------KFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDE-KGNKI 374 (723)
T ss_dssp CCCCCCEECTTSC----------SEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEET-TTTEE
T ss_pred ccCCCceEcCCCC----------eEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcC-CCCEE
Confidence 789999988 4553 45667 578888 33 33 3333323334444 68998 56777
Q ss_pred EE-ccCC--ceEEEEe
Q 019258 329 IC-SLEW--ESIAIVS 341 (343)
Q Consensus 329 ~~-~~~~--~~i~~~~ 341 (343)
+. +.++ +.+++|.
T Consensus 375 ~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 375 YFLSTEDLPRRRQLYS 390 (723)
T ss_dssp EEEESSSCTTCCEEEE
T ss_pred EEEEcCCCCcceEEEE
Confidence 54 4444 5666664
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=5.3e-18 Score=155.85 Aligned_cols=204 Identities=17% Similarity=0.100 Sum_probs=139.4
Q ss_pred CCeeEEEcc-CCCeEEEEcCCCcEEEEEccCce----------eee-eec-cCCccccCeEEEEec--CCEEE----EEe
Q 019258 72 TRISSLSTS-HQSLVAASTLSGSLHVLSSAMQV----------LLS-VDE-NSGFHVGPISGVDLT--GSECV----SVG 132 (343)
Q Consensus 72 ~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~----------~~~-~~~-~~~~h~~~v~~~~~~--~~~~~----s~s 132 (343)
..++.++++ ...++++++.+| +++|+..... .+. ... ....|.+.|.+++|+ ++.++ +++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 357888888 778899998888 8998764110 000 000 001245679999999 88888 788
Q ss_pred CCCcEEEEECCCC--------ce--EEEEEcCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecc
Q 019258 133 EDGRVNLVSVIGG--------GE--FKRVYDGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGN 200 (343)
Q Consensus 133 ~dg~v~~wd~~~~--------~~--~~~~~~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~ 200 (343)
.|++|++||+.+. +. ....+..|.. .|.+++|+| +..|++++.|++|++||++. +..+.....+
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~---~~~~~~~~~~ 191 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG-MVIDMKWNPTVPSMVAVCLADGSIAVLQVTE---TVKVCATLPS 191 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG-SEEEEEECSSCTTEEEEEETTSCEEEEEESS---SEEEEEEECG
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCC-ceEEEEECCCCCCEEEEEECCCeEEEEEcCC---CcceeeccCC
Confidence 9999999998653 11 1233344554 899999999 57899999999999999988 4444344443
Q ss_pred cCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCC
Q 019258 201 FGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNIS 280 (343)
Q Consensus 201 ~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~ 280 (343)
. ..|.+++|+|++.. +++|+.||+|++||++ ......+.. +.. ....|...|.+++|+++...
T Consensus 192 ~-------~~v~~v~wspdg~~-lasgs~dg~v~iwd~~-~~~~~~~~~-~~~---~~~~~~~~v~~v~w~~~~~~---- 254 (434)
T 2oit_A 192 T-------VAVTSVCWSPKGKQ-LAVGKQNGTVVQYLPT-LQEKKVIPC-PPF---YESDHPVRVLDVLWIGTYVF---- 254 (434)
T ss_dssp G-------GCEEEEEECTTSSC-EEEEETTSCEEEECTT-CCEEEEECC-CTT---CCTTSCEEEEEEEEEETTEE----
T ss_pred C-------CceeEEEEcCCCCE-EEEEcCCCcEEEEccC-CcccccccC-Ccc---cCCCCceeEEEEEEecCceE----
Confidence 3 77999999999764 5789999999999998 232222211 100 00134558999999987653
Q ss_pred CCCccceEEEecCCe------EEEEecC
Q 019258 281 SSRVLPAMFCSEDGI------LAVVEQG 302 (343)
Q Consensus 281 ~~~~~~l~s~s~dg~------i~~~~~~ 302 (343)
.++.++.||. +++|+..
T Consensus 255 -----l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 255 -----AIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp -----EEEEEETTCCSSSCCEEEEEECC
T ss_pred -----EEEEccCCCccCCCCceEEEEec
Confidence 3334555543 7788754
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.79 E-value=3.4e-17 Score=160.35 Aligned_cols=277 Identities=11% Similarity=0.024 Sum_probs=185.1
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEE
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLS 98 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~ 98 (343)
.|..++|+| ++++|++++. + .|++|++.............+.+.+.+++|+ +++.|+.++ ++.|++|+
T Consensus 110 ~v~~~~~Sp----Dg~~l~~~~~-~-----~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d 178 (741)
T 2ecf_A 110 GIVDYQWSP----DAQRLLFPLG-G-----ELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVID 178 (741)
T ss_dssp ESCCCEECT----TSSEEEEEET-T-----EEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred CcceeEECC----CCCEEEEEeC-C-----cEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEe
Confidence 488999999 8999998875 2 5889999654111223334566789999999 888888776 56899999
Q ss_pred ccCceeeeeeccCCcccc----------------CeEEEEec--CCEEEEEeCCC-------------------------
Q 019258 99 SAMQVLLSVDENSGFHVG----------------PISGVDLT--GSECVSVGEDG------------------------- 135 (343)
Q Consensus 99 ~~~~~~~~~~~~~~~h~~----------------~v~~~~~~--~~~~~s~s~dg------------------------- 135 (343)
+...+...+.. .+.. .+.++.|+ ++.|++++.|+
T Consensus 179 ~~~g~~~~~~~---~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 179 LASGRQMQLTA---DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp TTTTEEEECCC---CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred cCCCCEEEecc---CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 98655443322 1222 24778898 88888887765
Q ss_pred --------cEEEEECCC-CceEEEEEcC--CCccceEEEEeCC-CCEEEEEeC-----CCcEEEEEccccCCCCCeeEEe
Q 019258 136 --------RVNLVSVIG-GGEFKRVYDG--NGLVGFNCVKWAS-PTEFVTGGF-----GYGLQWWDLRRAGSGGPVLQFK 198 (343)
Q Consensus 136 --------~v~~wd~~~-~~~~~~~~~~--~~~~~v~~~~~~~-~~~l~t~~~-----d~~i~iwd~~~~~~~~~~~~~~ 198 (343)
.|.+||+.+ ++ ...+... +.. .+..++| | +..|+.++. +..|.+||+.. ++....+.
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~-~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~ 329 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQ-TQWIDLGKEQDI-YLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS---NQQRVLAH 329 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCC-CEEECCCSCSSE-EEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT---CCEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCCc-eEEecCCCCcce-EEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC---CceEEEEE
Confidence 788999988 74 4444322 333 6899999 9 777776654 67899999988 55444443
Q ss_pred cccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEE-EEeecCCCC
Q 019258 199 GNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEV-QYDCHTKSS 277 (343)
Q Consensus 199 ~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~~ 277 (343)
.+.. .-. ..+..++|+|++. ++++++.||.+.+|.+..... ...+ ..|...+..+ .|+|++..
T Consensus 330 ~~~~-~~~--~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l----------~~~~~~v~~~~~~s~dg~~- 393 (741)
T 2ecf_A 330 ETSP-TWV--PLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAAL----------THGNWSVDELLAVDEKAGL- 393 (741)
T ss_dssp EECS-SCC--CCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEES----------CCSSSCEEEEEEEETTTTE-
T ss_pred cCCC-CcC--CcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeee----------eecceEEEeEeEEeCCCCE-
Confidence 3321 000 1356889999987 777888999888887653222 3333 4466778887 59999874
Q ss_pred cCCCCCccceEEEecCC--eEEEEecC--CCcccccccccccceeeecCCCCCeeEEccCC----ceEEEEe
Q 019258 278 NISSSRVLPAMFCSEDG--ILAVVEQG--EEPFELLAEPCAINSFDIDPQNPSDVICSLEW----ESIAIVS 341 (343)
Q Consensus 278 ~~~~~~~~~l~s~s~dg--~i~~~~~~--~~~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~----~~i~~~~ 341 (343)
.+++++.++ .+++|+.. ......+.....+.+++++| +|++|+....+ ..+++++
T Consensus 394 --------l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~sp-dg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 394 --------AYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFAR-NASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp --------EEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECT-TSSEEEEEEEETTEEEEEEEEE
T ss_pred --------EEEEEeCCCCceEEEEEEEcCCCCeeecccCCCceEEEECC-CCCEEEEEecCCCCCCeEEEEE
Confidence 345566666 77777643 22223333355678999999 56777665433 3566654
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=2.5e-17 Score=142.01 Aligned_cols=217 Identities=11% Similarity=0.007 Sum_probs=153.8
Q ss_pred EcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCC-CceEEEEEcCCCccceEEEE
Q 019258 88 STLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIG-GGEFKRVYDGNGLVGFNCVK 164 (343)
Q Consensus 88 ~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~~~ 164 (343)
++.++.|++|++...+...+. .|.+.|.++.|+ ++.+++++ ++.|.+||+.+ ++ ...+...+....+.+++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~----~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVW----QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS-PEKVDTGFATICNNDHG 91 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEE----EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS-CEECCCTTCCCBCSCCE
T ss_pred CCcceeEEEEeCCCCceeeec----cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC-ceEeccccccccccceE
Confidence 456899999999866544333 377899999999 77788776 78999999998 74 55555445333688999
Q ss_pred eCC-CCEEEEEe--CCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCC
Q 019258 165 WAS-PTEFVTGG--FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQ 241 (343)
Q Consensus 165 ~~~-~~~l~t~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~ 241 (343)
|+| +..+++++ .++..++|.+.. .......+... ..+..++|+|++..++++++.|+.+.+|+++..
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~--------~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPS--TGGTPRLMTKN--------LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEET--TCCCCEECCSS--------SSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEEC--CCCceEEeecC--------CCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 999 77888888 345677776654 22334444322 348899999999888778889999999997543
Q ss_pred ceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-cCCeEEEEecC---CCcccccccccccce
Q 019258 242 QQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-EDGILAVVEQG---EEPFELLAEPCAINS 317 (343)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-~dg~i~~~~~~---~~~~~~~~~~~~i~s 317 (343)
....... ..|...+..+.|+|++. .++.++ .|+.+.+|+.. .....+......+.+
T Consensus 162 ~~~~~~~----------~~~~~~~~~~~~s~dg~----------~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 221 (297)
T 2ojh_A 162 SGVETRL----------THGEGRNDGPDYSPDGR----------WIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWF 221 (297)
T ss_dssp TCCEEEC----------CCSSSCEEEEEECTTSS----------EEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEE
T ss_pred CCcceEc----------ccCCCccccceECCCCC----------EEEEEecCCCCccEEEECCCCCCcEEEecCCcccCC
Confidence 3322333 34677899999999987 455554 58887777643 223333334567889
Q ss_pred eeecCCCCCeeEEccCC-----------ceEEEEe
Q 019258 318 FDIDPQNPSDVICSLEW-----------ESIAIVS 341 (343)
Q Consensus 318 ~~~~~~~~~~l~~~~~~-----------~~i~~~~ 341 (343)
+.|+| +|++|+.++.+ ..|++|+
T Consensus 222 ~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d 255 (297)
T 2ojh_A 222 PHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMD 255 (297)
T ss_dssp EEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEE
T ss_pred eEECC-CCCEEEEEEcCCCCCcccccCceEEEEEe
Confidence 99999 56888777654 4588876
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.78 E-value=2e-17 Score=145.88 Aligned_cols=260 Identities=13% Similarity=0.061 Sum_probs=175.0
Q ss_pred CeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCC---CeeEEEcc-CCCeE-EEEcCCCcEEEEEccCceeeeeec
Q 019258 35 KLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPT---RISSLSTS-HQSLV-AASTLSGSLHVLSSAMQVLLSVDE 109 (343)
Q Consensus 35 ~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~---~v~~v~~~-~~~~l-~~~s~dg~v~v~~~~~~~~~~~~~ 109 (343)
+++++++.++. |++||+... +.+..+.... .+..++|+ +++.+ +++..++.|.+||+...+.+....
T Consensus 2 ~~~v~~~~~~~-----v~~~d~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~ 73 (337)
T 1pby_B 2 DYILAPARPDK-----LVVIDTEKM---AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID 73 (337)
T ss_dssp EEEEEEETTTE-----EEEEETTTT---EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred cEEEEcCCCCe-----EEEEECCCC---cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEE
Confidence 46888888864 779998542 2233444444 58899999 66555 556668999999998655443332
Q ss_pred cCC--ccccCeEEEEec--CCEEEEEe------------CCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEE
Q 019258 110 NSG--FHVGPISGVDLT--GSECVSVG------------EDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFV 172 (343)
Q Consensus 110 ~~~--~h~~~v~~~~~~--~~~~~s~s------------~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~ 172 (343)
... .|...+.++.|+ ++.+++++ .++.|.+||+.+++ ....+.... .+.++.|+| ++.++
T Consensus 74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-~~~~~~~~~--~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS-RRKAFEAPR--QITMLAWARDGSKLY 150 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE-EEEEEECCS--SCCCEEECTTSSCEE
T ss_pred cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc-EEEEEeCCC--CcceeEECCCCCEEE
Confidence 210 122356678887 77787775 67999999998874 444444333 478889999 66566
Q ss_pred EEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC---------------------
Q 019258 173 TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG--------------------- 231 (343)
Q Consensus 173 t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg--------------------- 231 (343)
++ ++.|.+||+.. ++....+..... ...+.|+|++..+++++..++
T Consensus 151 ~~--~~~i~~~d~~~---~~~~~~~~~~~~--------~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (337)
T 1pby_B 151 GL--GRDLHVMDPEA---GTLVEDKPIQSW--------EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAY 217 (337)
T ss_dssp EE--SSSEEEEETTT---TEEEEEECSTTT--------TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGE
T ss_pred Ee--CCeEEEEECCC---CcEeeeeecccc--------CCCceeCCCccEEeeeccCCCceeeeeecccccccccccccc
Confidence 66 68999999987 555544443220 112267888876655444444
Q ss_pred --cEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-cccc
Q 019258 232 --TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFEL 308 (343)
Q Consensus 232 --~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~ 308 (343)
.|.+||+++.+...... ..+...+..++|+|++. .++++ ++.|++|+.... ....
T Consensus 218 ~~~v~~~d~~~~~~~~~~~----------~~~~~~~~~~~~s~dg~----------~l~~~--~~~v~~~d~~~~~~~~~ 275 (337)
T 1pby_B 218 RTGLLTMDLETGEMAMREV----------RIMDVFYFSTAVNPAKT----------RAFGA--YNVLESFDLEKNASIKR 275 (337)
T ss_dssp EEEEEEEETTTCCEEEEEE----------EECSSCEEEEEECTTSS----------EEEEE--ESEEEEEETTTTEEEEE
T ss_pred ccceEEEeCCCCCceEeec----------CCCCCceeeEEECCCCC----------EEEEe--CCeEEEEECCCCcCcce
Confidence 46899998765431111 23556788999999987 56666 799999997543 2233
Q ss_pred cccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 309 LAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 309 ~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
......+.++.++| +|++|++++.++.|++|+
T Consensus 276 ~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 276 VPLPHSYYSVNVST-DGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp EECSSCCCEEEECT-TSCEEEEESBSSEEEEEE
T ss_pred ecCCCceeeEEECC-CCCEEEEEcCCCcEEEEE
Confidence 33345688999999 568888888889999986
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=2e-16 Score=140.59 Aligned_cols=279 Identities=11% Similarity=0.084 Sum_probs=168.9
Q ss_pred eEEEEeecCC-CCCCceeeeeCCCC-CCCCCCccCCCCCCeeEEEcc-CCCeEEEEcC---CCcEEEEEccCceeeeeec
Q 019258 36 LAVLAIYDTD-ADSPSLETHSISLP-ASLTPHSQWTPPTRISSLSTS-HQSLVAASTL---SGSLHVLSSAMQVLLSVDE 109 (343)
Q Consensus 36 ~l~t~s~D~~-~~~~~l~~w~~~~~-~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~---dg~v~v~~~~~~~~~~~~~ 109 (343)
.+..|++-.. .+ .+.+|.+... .....+....+...+..++|+ ++. |++++. ++.|.+|++.......+..
T Consensus 4 ~~~vg~y~~~~~~--~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 4 RILFGTYTKKTSQ--GIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEECCSSSCC--EEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEeccCCCCC--CEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeee
Confidence 4556655332 22 2455555321 112222334455678889999 666 555544 6899999996443222221
Q ss_pred cCCccccCeEEEEec--CCEEEEEe-CCCcEEEEECCC-Cc-eEEEEEcCCC--------ccceEEEEeCC-CCEEEEEe
Q 019258 110 NSGFHVGPISGVDLT--GSECVSVG-EDGRVNLVSVIG-GG-EFKRVYDGNG--------LVGFNCVKWAS-PTEFVTGG 175 (343)
Q Consensus 110 ~~~~h~~~v~~~~~~--~~~~~s~s-~dg~v~~wd~~~-~~-~~~~~~~~~~--------~~~v~~~~~~~-~~~l~t~~ 175 (343)
...+...+..++++ ++.+++++ .++.|.+||+.. +. .......... ...+.+++|+| +..+++..
T Consensus 81 -~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 81 -VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp -EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred -eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 11355667888888 77787777 789999999963 21 1122221111 11488899999 55555556
Q ss_pred CCCcEEEEEccccCCCCCeeE---EecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccC--Cce-eeeeec
Q 019258 176 FGYGLQWWDLRRAGSGGPVLQ---FKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW--QQQ-SIVLSG 249 (343)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~--~~~-~~~~~~ 249 (343)
.++.|.+||+.. .+. +.. +....+ .....++|+|++..+++++..++.|.+||+.. +.. ......
T Consensus 160 ~~~~v~~~~~~~--~g~-~~~~~~~~~~~g------~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~ 230 (347)
T 3hfq_A 160 GSDKVYVYNVSD--AGQ-LSEQSVLTMEAG------FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK 230 (347)
T ss_dssp TTTEEEEEEECT--TSC-EEEEEEEECCTT------CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE
T ss_pred CCCEEEEEEECC--CCc-EEEeeeEEcCCC------CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee
Confidence 688999999984 132 222 222211 34778999999988888788899999999874 221 111110
Q ss_pred CCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-cccccc---c-ccccceeeecCCC
Q 019258 250 VGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFELLA---E-PCAINSFDIDPQN 324 (343)
Q Consensus 250 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~~~---~-~~~i~s~~~~~~~ 324 (343)
.... .......+..++|+|++.. .+++...++.|.+|+.... ...... . ...+..++++| +
T Consensus 231 ~~~~----~~~~~~~~~~i~~spdG~~---------l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp-d 296 (347)
T 3hfq_A 231 TIPA----DYTAHNGAAAIRLSHDGHF---------LYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP-T 296 (347)
T ss_dssp SSCT----TCCSCCEEEEEEECTTSCE---------EEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECT-T
T ss_pred ecCC----CCCCCCcceeEEECCCCCE---------EEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECC-C
Confidence 0000 0001245889999999884 3466677899999986521 112111 1 23578999999 5
Q ss_pred CCeeEEcc-CCceEEEEe
Q 019258 325 PSDVICSL-EWESIAIVS 341 (343)
Q Consensus 325 ~~~l~~~~-~~~~i~~~~ 341 (343)
|++|++++ +++.|.+|.
T Consensus 297 g~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 297 EAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp SSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEcCCCcEEEEE
Confidence 67776665 458899884
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=9e-17 Score=153.12 Aligned_cols=264 Identities=14% Similarity=0.056 Sum_probs=174.8
Q ss_pred cceeeEEecCCCCCCCCeEEEEee-cCCCCCCceeeeeCCCCCCCCCCccCCCC-CCeeEEEccCCCeEEEEcC---CCc
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIY-DTDADSPSLETHSISLPASLTPHSQWTPP-TRISSLSTSHQSLVAASTL---SGS 93 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~-D~~~~~~~l~~w~~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~l~~~s~---dg~ 93 (343)
..|..++++| +++.||.++. |+. +++|++... .+.....+. ..+.++.|+.+.++++++. +..
T Consensus 22 ~~~~~~~~~~----DG~~la~~s~~~g~-----~~lw~~~~g---~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 22 VEKYSLQGVV----DGDKLLVVGFSEGS-----VNAYLYDGG---ETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQ 89 (582)
T ss_dssp SCEEEEEEEE----TTTEEEEEEEETTE-----EEEEEEETT---EEEECCSSCCSEECEECTTCSEEEEEEECSTTSCC
T ss_pred cchheeecCC----CCCeEEEEEccCCc-----eeEEEEcCC---CcEeeecccccccccccCCCCeEEEEeccCCCCcc
Confidence 4699999999 9999999887 654 668887432 222233444 5799999993366666654 455
Q ss_pred EEEEEccC--c-eeeeeeccCCccccCeEEEEecCC-EEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-C
Q 019258 94 LHVLSSAM--Q-VLLSVDENSGFHVGPISGVDLTGS-ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-P 168 (343)
Q Consensus 94 v~v~~~~~--~-~~~~~~~~~~~h~~~v~~~~~~~~-~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 168 (343)
.++|.+.. . ....+.. .+...+.+++++++ .+++.+.++.+.+||+.+++ ...+...+. .+++|+| +
T Consensus 90 ~~l~~~~~~~~g~~~~l~~---~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~-~~~l~~~~~----~~~~~spDG 161 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQRLEA---VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG-LRELARLPG----FGFVSDIRG 161 (582)
T ss_dssp EEEEEEETTSTTCCEECTT---SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE-EEEEEEESS----CEEEEEEET
T ss_pred eEEEEEeccCCCccccccC---CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc-EEEeecCCC----ceEEECCCC
Confidence 67766542 2 2222211 11112445555543 34444444556699999884 555544332 6888999 8
Q ss_pred CEEEEEeCC----CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC--cEEEEEccCCc
Q 019258 169 TEFVTGGFG----YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG--TVFAWDLRWQQ 242 (343)
Q Consensus 169 ~~l~t~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg--~v~iwd~~~~~ 242 (343)
..+++++.+ +.|++||+.. ++ ...+..+. +.+..++|+|+|..++ ++..+| .|++||+.+++
T Consensus 162 ~~la~~~~~~~~~~~i~~~d~~~---g~-~~~l~~~~-------~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 162 DLIAGLGFFGGGRVSLFTSNLSS---GG-LRVFDSGE-------GSFSSASISPGMKVTA-GLETAREARLVTVDPRDGS 229 (582)
T ss_dssp TEEEEEEEEETTEEEEEEEETTT---CC-CEEECCSS-------CEEEEEEECTTSCEEE-EEECSSCEEEEEECTTTCC
T ss_pred CEEEEEEEcCCCCeEEEEEcCCC---CC-ceEeecCC-------CccccceECCCCCEEE-EccCCCeeEEEEEcCCCCc
Confidence 888878777 7899999977 44 34555443 6689999999998664 777888 89999998755
Q ss_pred eeeeeecCCCCcccccCCccccEEEEE--------EeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcccccccccc
Q 019258 243 QSIVLSGVGTGEAVTHSLSESEVWEVQ--------YDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAEPCA 314 (343)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~h~~~v~~v~--------~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~ 314 (343)
.. .. ..|...+..+. |+|++ . .+++++.||++++|+. .+... .....
T Consensus 230 ~~--~~----------~~~~~~~~~~~~~~~~~~~~spdg-~---------~~~~~~~~g~~~l~~~-g~~~~--~~~~~ 284 (582)
T 3o4h_A 230 VE--DL----------ELPSKDFSSYRPTAITWLGYLPDG-R---------LAVVARREGRSAVFID-GERVE--APQGN 284 (582)
T ss_dssp EE--EC----------CCSCSHHHHHCCSEEEEEEECTTS-C---------EEEEEEETTEEEEEET-TEEEC--CCSSE
T ss_pred EE--Ec----------cCCCcChhhhhhccccceeEcCCC-c---------EEEEEEcCCcEEEEEE-CCeec--cCCCc
Confidence 43 43 44666666666 99999 4 8999999999999998 32222 12246
Q ss_pred cceeeecCCCCCeeEEccCCc---eEEEEe
Q 019258 315 INSFDIDPQNPSDVICSLEWE---SIAIVS 341 (343)
Q Consensus 315 i~s~~~~~~~~~~l~~~~~~~---~i~~~~ 341 (343)
+.+++++ ++..+++++.+. .+++++
T Consensus 285 v~~~~~s--dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 285 HGRVVLW--RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEEEEE--TTEEEEEEEETTEEEEEEEET
T ss_pred eEEEEec--CCEEEEEEcCCCCCCeEEEEc
Confidence 7888888 357777766553 455553
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.75 E-value=5e-16 Score=151.54 Aligned_cols=273 Identities=9% Similarity=-0.019 Sum_probs=172.5
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCC----CCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDAD----SPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~----~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.|..++|+| ++++|++++.+.... ...+++|++.............+...+..++|+ +++.|+.++. +.|
T Consensus 62 ~v~~~~~Sp----Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i 136 (723)
T 1xfd_A 62 RAIRYEISP----DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNI 136 (723)
T ss_dssp TCSEEEECT----TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEE
T ss_pred ccceEEECC----CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeE
Confidence 489999999 899999998765432 246889999653321111112334458899999 8888888776 789
Q ss_pred EEEEccCceeeeeeccCCcccc------------------CeEEEEec--CCEEEEEeCCC-------------------
Q 019258 95 HVLSSAMQVLLSVDENSGFHVG------------------PISGVDLT--GSECVSVGEDG------------------- 135 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~~~~h~~------------------~v~~~~~~--~~~~~s~s~dg------------------- 135 (343)
++|++...+...+... +.. .+.++.|+ ++.|++++.|+
T Consensus 137 ~~~~~~~g~~~~~~~~---~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (723)
T 1xfd_A 137 YYCAHVGKQAIRVVST---GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTV 213 (723)
T ss_dssp EEESSSSSCCEEEECC---CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCC
T ss_pred EEEECCCCceEEEecC---CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcc
Confidence 9999986554443321 222 23789998 88888887553
Q ss_pred ---------------cEEEEECCCCceEEEEEcCCC-----ccceEEEEeCC-CCEEEEEeC----CCcEEEEEccccCC
Q 019258 136 ---------------RVNLVSVIGGGEFKRVYDGNG-----LVGFNCVKWAS-PTEFVTGGF----GYGLQWWDLRRAGS 190 (343)
Q Consensus 136 ---------------~v~~wd~~~~~~~~~~~~~~~-----~~~v~~~~~~~-~~~l~t~~~----d~~i~iwd~~~~~~ 190 (343)
.|.+||+.+++....+ ..+. ...+..++|+| +..+++... +..|.+||+..
T Consensus 214 ~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l-~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~--- 289 (723)
T 1xfd_A 214 KPYHYPKAGSENPSISLHVIGLNGPTHDLEM-MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT--- 289 (723)
T ss_dssp EEEECCBTTSCCCEEEEEEEESSSSCCCEEC-CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT---
T ss_pred eeccCCCCCCCCCeeEEEEEECCCCceeEEe-eCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC---
Confidence 7999999887422333 3221 22689999999 555555543 36799999987
Q ss_pred CCCeeEEecccCCCCCcccCe----EEEEEcCCCCeEEEE-EecCC------cEEEEEccCCce---eeeeecCCCCccc
Q 019258 191 GGPVLQFKGNFGSQGKASGMI----HSVDIHPSRKHTCLA-GGSSG------TVFAWDLRWQQQ---SIVLSGVGTGEAV 256 (343)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i----~~v~~~p~~~~~~~s-g~~dg------~v~iwd~~~~~~---~~~~~~~~~~~~~ 256 (343)
++....+..... +.+ ..++|+|++..+++. +..++ .|.+||+..... ...+.
T Consensus 290 g~~~~~~~~~~~------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-------- 355 (723)
T 1xfd_A 290 GVCTKKHEDESE------AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT-------- 355 (723)
T ss_dssp CCEEEEEEEECS------SCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC--------
T ss_pred CcceEEEEeccC------CEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee--------
Confidence 554433332211 233 378999999877665 56677 577777322222 22222
Q ss_pred ccCCccccEEE-EEEeecCCCCcCCCCCccceEEEecC---CeEEEEecCCC---cccccc----cccccceeeecCCCC
Q 019258 257 THSLSESEVWE-VQYDCHTKSSNISSSRVLPAMFCSED---GILAVVEQGEE---PFELLA----EPCAINSFDIDPQNP 325 (343)
Q Consensus 257 ~~~~h~~~v~~-v~~~p~~~~~~~~~~~~~~l~s~s~d---g~i~~~~~~~~---~~~~~~----~~~~i~s~~~~~~~~ 325 (343)
.+...+.. ++|+|++. .|+..+.+ +.+.+|+.... ....+. ....+.+++++| +|
T Consensus 356 ---~~~~~~~~~~~~spdg~----------~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~sp-dg 421 (723)
T 1xfd_A 356 ---SGDWDVTKILAYDEKGN----------KIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSH-SM 421 (723)
T ss_dssp ---CSSSCEEEEEEEETTTT----------EEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECT-TS
T ss_pred ---cCCeEEEeeeEEcCCCC----------EEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECC-CC
Confidence 12333444 69999988 56555444 67777765321 122222 245688999999 56
Q ss_pred CeeEEcc
Q 019258 326 SDVICSL 332 (343)
Q Consensus 326 ~~l~~~~ 332 (343)
++++...
T Consensus 422 ~~l~~~~ 428 (723)
T 1xfd_A 422 DFFLLKC 428 (723)
T ss_dssp SEEEEEC
T ss_pred CEEEEEc
Confidence 7776543
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.74 E-value=4e-16 Score=158.47 Aligned_cols=280 Identities=8% Similarity=-0.048 Sum_probs=192.3
Q ss_pred cccceeeEEec-CCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCC-CeeEEEccCCCeEEEEcCCCcE
Q 019258 17 QSKYIDAVRWL-PPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPT-RISSLSTSHQSLVAASTLSGSL 94 (343)
Q Consensus 17 ~~~~i~~v~w~-p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~l~~~s~dg~v 94 (343)
+...|..++|+ | +++.+++++ ++ .+++|++.... ......+.+ .+..+.|+++..|+.++.++.+
T Consensus 294 ~~~~v~~~~~S~p----dG~~la~~~-~~-----~i~~~~~~~~~---~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l 360 (1045)
T 1k32_A 294 SIPSKFAEDFSPL----DGDLIAFVS-RG-----QAFIQDVSGTY---VLKVPEPLRIRYVRRGGDTKVAFIHGTREGDF 360 (1045)
T ss_dssp ECGGGGEEEEEEC----GGGCEEEEE-TT-----EEEEECTTSSB---EEECSCCSCEEEEEECSSSEEEEEEEETTEEE
T ss_pred cccccceeeecCC----CCCEEEEEE-cC-----EEEEEcCCCCc---eEEccCCCcceEEeeeEcCCCeEEEEECCCce
Confidence 34479999999 8 888898887 32 47788885432 122335666 7899999955678888877778
Q ss_pred E-EEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCE
Q 019258 95 H-VLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTE 170 (343)
Q Consensus 95 ~-v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 170 (343)
. +|++...+...+. .|...+..+.|+ ++.+++++.++.|++||+.+++ ...+...+.. .+.+++|+| +..
T Consensus 361 ~~~~d~~~~~~~~l~----~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~-~~~~~~~~~~-~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 361 LGIYDYRTGKAEKFE----ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK-PTVIERSREA-MITDFTISDNSRF 434 (1045)
T ss_dssp EEEEETTTCCEEECC----CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC-EEEEEECSSS-CCCCEEECTTSCE
T ss_pred EEEEECCCCCceEec----CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc-eEEeccCCCC-CccceEECCCCCe
Confidence 7 8888754433222 477789999998 8899999999999999999884 5555545554 688999999 777
Q ss_pred EEEEeCCC----------cEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccC
Q 019258 171 FVTGGFGY----------GLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240 (343)
Q Consensus 171 l~t~~~d~----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~ 240 (343)
+++++.++ .|++||+.. ++ +..+..+. ..+..++|+|++..+ +.++.++...+|+...
T Consensus 435 la~~~~~~~~~~~~~~~~~i~l~d~~~---g~-~~~l~~~~-------~~~~~~~~spdG~~l-~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 435 IAYGFPLKHGETDGYVMQAIHVYDMEG---RK-IFAATTEN-------SHDYAPAFDADSKNL-YYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp EEEEEEECSSTTCSCCEEEEEEEETTT---TE-EEECSCSS-------SBEEEEEECTTSCEE-EEEESCCCCCEECSSS
T ss_pred EEEEecCccccccCCCCCeEEEEECCC---Cc-EEEeeCCC-------cccCCceEcCCCCEE-EEEecccCCcCcchhc
Confidence 88877654 999999977 43 45555443 568889999999765 5677777777787543
Q ss_pred Cce-------eeeee-c--------------------CCC----CcccccCCccccEEEEEEeecCCCCcCCCCCccceE
Q 019258 241 QQQ-------SIVLS-G--------------------VGT----GEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAM 288 (343)
Q Consensus 241 ~~~-------~~~~~-~--------------------~~~----~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~ 288 (343)
... +..+. . ... ........|.+.+..+.++|++. .++
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~----------~~~ 572 (1045)
T 1k32_A 503 LNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSI----------LIY 572 (1045)
T ss_dssp SCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEE----------EEE
T ss_pred cccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCe----------EEE
Confidence 211 11000 0 000 00111234667789999999876 455
Q ss_pred E-------------EecCCeEEEEecCCCcccccccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 289 F-------------CSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 289 s-------------~s~dg~i~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+ ...++.|+.|+......+.+. ..+.+++++| +|++|+.++++ .|++|+
T Consensus 573 ~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~--~~v~~~~~S~-DG~~l~~~~~~-~i~~~d 634 (1045)
T 1k32_A 573 SVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK--NNLTDLRLSA-DRKTVMVRKDD-GKIYTF 634 (1045)
T ss_dssp ECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE--EEEEEEEECT-TSCEEEEEETT-SCEEEE
T ss_pred EecccCcccccccccCCCceEEEEECCCCcEEEee--cCcceEEECC-CCCEEEEEcCC-cEEEEe
Confidence 3 123446888887544433333 5688999999 67888888766 688775
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=6.5e-15 Score=131.64 Aligned_cols=280 Identities=14% Similarity=0.129 Sum_probs=171.5
Q ss_pred CCeEEEEeecCCCCCCceeeeeCCCC-CCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCC----CcEEEEEccCc-eeee
Q 019258 34 SKLAVLAIYDTDADSPSLETHSISLP-ASLTPHSQWTPPTRISSLSTS-HQSLVAASTLS----GSLHVLSSAMQ-VLLS 106 (343)
Q Consensus 34 ~~~l~t~s~D~~~~~~~l~~w~~~~~-~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~d----g~v~v~~~~~~-~~~~ 106 (343)
..++..|++.... .-.|.+|.+... .....+... +...+..++|+ ++++|++++.+ +.|.+|++... ..+.
T Consensus 13 ~~~~~vg~y~~~~-~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~ 90 (361)
T 3scy_A 13 ELTMLVGTYTSGN-SKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH 90 (361)
T ss_dssp EEEEEEEECCSSS-CCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE
T ss_pred ceEEEEEeccCCC-CCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE
Confidence 4566778775421 113667776322 222233333 56678889999 78888888875 89999998742 2222
Q ss_pred eeccCCccccCeEEEEecCCEEEEEe-CCCcEEEEECCCCceEE---EEEcCCC---------ccceEEEEeCC-CCEEE
Q 019258 107 VDENSGFHVGPISGVDLTGSECVSVG-EDGRVNLVSVIGGGEFK---RVYDGNG---------LVGFNCVKWAS-PTEFV 172 (343)
Q Consensus 107 ~~~~~~~h~~~v~~~~~~~~~~~s~s-~dg~v~~wd~~~~~~~~---~~~~~~~---------~~~v~~~~~~~-~~~l~ 172 (343)
.......+......+.+.++.+++++ .++.|.+|++....... ....... ...+.+++|+| ++.++
T Consensus 91 ~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 91 LLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred EeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 22111123345666777777666665 68899999997532111 1111111 11358899999 66555
Q ss_pred EEe-CCCcEEEEEccccCCCC----C-ee------EEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccC
Q 019258 173 TGG-FGYGLQWWDLRRAGSGG----P-VL------QFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240 (343)
Q Consensus 173 t~~-~d~~i~iwd~~~~~~~~----~-~~------~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~ 240 (343)
+++ .++.|.+|++.. ... . +. ......+ .....++|+|++..+++++..++.|.+||+..
T Consensus 171 ~~~~~~~~v~v~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 242 (361)
T 3scy_A 171 ADDLGTDQIHKFNINP--NANADNKEKFLTKGTPEAFKVAPG------SGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD 242 (361)
T ss_dssp EEETTTTEEEEEEECT--TCCTTTCCCCEEEEEEEEEECCTT------CCEEEEEECTTSSEEEEEETTTCEEEEEEEET
T ss_pred EEeCCCCEEEEEEEcC--CCCcccccceeecccccceecCCC------CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC
Confidence 555 489999999876 221 1 21 1221111 44789999999987776666799999999985
Q ss_pred Ccee-eeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-c-CCeEEEEecCC--Ccccccc---cc
Q 019258 241 QQQS-IVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-E-DGILAVVEQGE--EPFELLA---EP 312 (343)
Q Consensus 241 ~~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-~-dg~i~~~~~~~--~~~~~~~---~~ 312 (343)
+... ...... ...+......++|+|++. +|+.+. . ++.|.+|+... ....... ..
T Consensus 243 g~~~~~~~~~~-------~~~~~~~~~~i~~spdg~----------~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g 305 (361)
T 3scy_A 243 GMLDEIQTVAA-------DTVNAQGSGDIHLSPDGK----------YLYASNRLKADGVAIFKVDETNGTLTKVGYQLTG 305 (361)
T ss_dssp TEEEEEEEEES-------CSSCCCCEEEEEECTTSS----------EEEEEECSSSCEEEEEEECTTTCCEEEEEEEECS
T ss_pred CceEEeEEEec-------CCCCCCCcccEEECCCCC----------EEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCC
Confidence 4321 111100 023345568999999988 565544 4 58999998742 2222221 13
Q ss_pred cccceeeecCCCCCeeEEcc-CCceEEEEe
Q 019258 313 CAINSFDIDPQNPSDVICSL-EWESIAIVS 341 (343)
Q Consensus 313 ~~i~s~~~~~~~~~~l~~~~-~~~~i~~~~ 341 (343)
..+..++++| +|++|++++ +++.|.+|.
T Consensus 306 ~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 306 IHPRNFIITP-NGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp SCCCEEEECT-TSCEEEEEETTTTEEEEEE
T ss_pred CCCceEEECC-CCCEEEEEECCCCCEEEEE
Confidence 4678999999 568777776 668888864
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.73 E-value=2.2e-15 Score=133.90 Aligned_cols=255 Identities=11% Similarity=0.034 Sum_probs=158.7
Q ss_pred CCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc-CCCCCCeeEEEcc-CCCeEEEEc-CC
Q 019258 15 FPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ-WTPPTRISSLSTS-HQSLVAAST-LS 91 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~-~~~~~~v~~v~~~-~~~~l~~~s-~d 91 (343)
..+...+..++|+| +++ +++++.++..+ .|++|++.... ...+.. ..+...+..++|+ ++++|++++ .+
T Consensus 36 ~~~~~~p~~~a~sp----dg~-l~~~~~~~~~~--~v~~~~~~~g~-~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~ 107 (347)
T 3hfq_A 36 LAATQNPTYLALSA----KDC-LYSVDKEDDEG--GIAAWQIDGQT-AHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK 107 (347)
T ss_dssp EEECSCCCCEEECT----TCE-EEEEEEETTEE--EEEEEEEETTE-EEEEEEEEEESCCCSEEEEETTTTEEEEEETTT
T ss_pred eeccCCcceEEEcc----CCe-EEEEEecCCCc--eEEEEEecCCc-EEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC
Confidence 34456678899999 777 44444421111 47899984322 222222 2345678899999 788777777 68
Q ss_pred CcEEEEEccCc-e--eeeeeccC------CccccCeEEEEec--CCEEEEEeCCCcEEEEECC-CCceEEEE--EcCCCc
Q 019258 92 GSLHVLSSAMQ-V--LLSVDENS------GFHVGPISGVDLT--GSECVSVGEDGRVNLVSVI-GGGEFKRV--YDGNGL 157 (343)
Q Consensus 92 g~v~v~~~~~~-~--~~~~~~~~------~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~-~~~~~~~~--~~~~~~ 157 (343)
+.|.+|++... . .+...... ..+...+.++.|+ ++.+++...++.|.+||+. +++ .... ......
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~-~~~~~~~~~~~g 186 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQ-LSEQSVLTMEAG 186 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSC-EEEEEEEECCTT
T ss_pred CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCc-EEEeeeEEcCCC
Confidence 99999999622 1 12111110 0122348889998 6766666778999999998 442 2221 122222
Q ss_pred cceEEEEeCC-CCEEEE-EeCCCcEEEEEccccCCCCCe---eEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCc
Q 019258 158 VGFNCVKWAS-PTEFVT-GGFGYGLQWWDLRRAGSGGPV---LQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT 232 (343)
Q Consensus 158 ~~v~~~~~~~-~~~l~t-~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~ 232 (343)
.....++|+| ++.+++ ...++.|.+|++.. ....+ ..+...... ......+..++|+|+++.+++++..++.
T Consensus 187 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~--~~g~~~~~~~~~~~~~~-~~~~~~~~~i~~spdG~~l~v~~~~~~~ 263 (347)
T 3hfq_A 187 FGPRHLVFSPDGQYAFLAGELSSQIASLKYDT--QTGAFTQLGIVKTIPAD-YTAHNGAAAIRLSHDGHFLYVSNRGYNT 263 (347)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEET--TTTEEEEEEEEESSCTT-CCSCCEEEEEEECTTSCEEEEEEETTTE
T ss_pred CCCceEEECCCCCEEEEEeCCCCEEEEEEecC--CCCceEEeeeeeecCCC-CCCCCcceeEEECCCCCEEEEEeCCCCE
Confidence 2578899999 664444 56689999999874 11222 122211100 0000348899999999888788888999
Q ss_pred EEEEEccCCce--eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-cCCeEEEEec
Q 019258 233 VFAWDLRWQQQ--SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-EDGILAVVEQ 301 (343)
Q Consensus 233 v~iwd~~~~~~--~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-~dg~i~~~~~ 301 (343)
|.+||+..... ..... ..+...+..++|+|++. +|++++ .++.|.+|+.
T Consensus 264 v~v~~~~~~g~~~~~~~~----------~~~~~~~~~~~~spdg~----------~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 264 LAVFAVTADGHLTLIQQI----------STEGDFPRDFDLDPTEA----------FVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEEEEECGGGCEEEEEEE----------ECSSSCCCEEEECTTSS----------EEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCcEEEeEEE----------ecCCCCcCeEEECCCCC----------EEEEEEcCCCcEEEEEE
Confidence 99999873221 22222 23445678999999988 566665 4589999954
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.72 E-value=2.4e-15 Score=146.47 Aligned_cols=246 Identities=7% Similarity=-0.008 Sum_probs=164.2
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCC-----CCCCCCCccCCCC-------------CCeeEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISL-----PASLTPHSQWTPP-------------TRISSL 77 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~-----~~~~~~~~~~~~~-------------~~v~~v 77 (343)
.+...+..++|+| +++.|+.+ .|+ .|++|++.. .... .+...... +.+.++
T Consensus 118 ~~~~~~~~~~~Sp----dG~~la~~-~~~-----~i~v~~~~~~~~~~g~~~-~~~~~~~~~~~~g~~~~~ee~~~~~~~ 186 (706)
T 2z3z_A 118 DTNEETASLDFSP----VGDRVAYV-RNH-----NLYIARGGKLGEGMSRAI-AVTIDGTETLVYGQAVHQREFGIEKGT 186 (706)
T ss_dssp CCTTCCTTCEECT----TSSEEEEE-ETT-----EEEEEECBCTTSCCCCCE-ESCSCCBTTEEESSCCGGGCTTCCCSE
T ss_pred CCcccccCCcCCC----CCCEEEEE-ECC-----eEEEEecCcccccCCCcE-EeccCCCCCeEcccchhhhhcCCCceE
Confidence 3456788999999 89888885 554 488999965 2211 11111111 125899
Q ss_pred Ecc-CCCeEEEEc---------------------------------CCCcEEEEEccCceeeeeeccCCccccCeEEEEe
Q 019258 78 STS-HQSLVAAST---------------------------------LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDL 123 (343)
Q Consensus 78 ~~~-~~~~l~~~s---------------------------------~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~ 123 (343)
.|+ +++.|++++ .+..|++||+...+...+.. ...|...+.++.|
T Consensus 187 ~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~~ 265 (706)
T 2z3z_A 187 FWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT-GEPKEKFLTNLSW 265 (706)
T ss_dssp EECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC-CSCTTCEEEEEEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc-CCCCceeEeeEEE
Confidence 999 888898887 44679999998655433322 1246678999999
Q ss_pred c--CCEEEEEeCCC-----cEEEEECCCCceEEEEEcCCCc---cceEEEEeCC--CC-EEEEEeCCCcEEEEEccccCC
Q 019258 124 T--GSECVSVGEDG-----RVNLVSVIGGGEFKRVYDGNGL---VGFNCVKWAS--PT-EFVTGGFGYGLQWWDLRRAGS 190 (343)
Q Consensus 124 ~--~~~~~s~s~dg-----~v~~wd~~~~~~~~~~~~~~~~---~~v~~~~~~~--~~-~l~t~~~d~~i~iwd~~~~~~ 190 (343)
+ ++.+++++.++ .|.+||+.+++....+...... ..+..+.|+| .. .++++..|+.+++|++.. .
T Consensus 266 spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~--~ 343 (706)
T 2z3z_A 266 SPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT--T 343 (706)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET--T
T ss_pred ECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEEC--C
Confidence 8 78888887775 8999999987334443322111 1246778987 54 555666789999999874 2
Q ss_pred CCCeeEEecccCCCCCcccCeEE-EEEcCCCCeEEEEEecCC----cEEEEEccCCceeeeeecCCCCcccccCCccccE
Q 019258 191 GGPVLQFKGNFGSQGKASGMIHS-VDIHPSRKHTCLAGGSSG----TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEV 265 (343)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~-v~~~p~~~~~~~sg~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v 265 (343)
+..+..+..+. ..+.. ++|+|++..++++++.++ .|..||+..+. ... + .|...+
T Consensus 344 ~~~~~~l~~~~-------~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~-l-----------~~~~~~ 403 (706)
T 2z3z_A 344 GRLIRQVTKGE-------WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKD-L-----------TPESGM 403 (706)
T ss_dssp SCEEEECCCSS-------SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEE-S-----------CCSSSE
T ss_pred CCEEEecCCCC-------eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-cee-c-----------cCCCce
Confidence 45555555432 45766 799999988877777776 67777776533 222 2 256678
Q ss_pred EEEEEeecCCCCcCCCCCccceEEEecC---CeEEEEecCCC
Q 019258 266 WEVQYDCHTKSSNISSSRVLPAMFCSED---GILAVVEQGEE 304 (343)
Q Consensus 266 ~~v~~~p~~~~~~~~~~~~~~l~s~s~d---g~i~~~~~~~~ 304 (343)
..++|+|++.. .+++++.+ +.|++|+....
T Consensus 404 ~~~~~spdg~~---------l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 404 HRTQLSPDGSA---------IIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEEEECTTSSE---------EEEEEECSSCSCEEEEEESSSC
T ss_pred EEEEECCCCCE---------EEEEecCCCCCcEEEEEECCCC
Confidence 99999999884 33444444 56999987543
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.72 E-value=6.8e-15 Score=129.61 Aligned_cols=227 Identities=8% Similarity=-0.046 Sum_probs=153.1
Q ss_pred CCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEe-CCCcEEEEECCCCceEEEEEcCCCcc
Q 019258 82 QSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVG-EDGRVNLVSVIGGGEFKRVYDGNGLV 158 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s-~dg~v~~wd~~~~~~~~~~~~~~~~~ 158 (343)
...+++.+.++.|.+||....+...... .+.... .+.++ ++.+++++ .++.|.+||+.+++........+..
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~- 84 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQIT---LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQS- 84 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEE---CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSS-
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEE---ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCC-
Confidence 4457788889999999998665544433 234445 88887 66565555 4899999999987542444444443
Q ss_pred ceEEEEeCC-CCEEEEEeCCC---cEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCc-E
Q 019258 159 GFNCVKWAS-PTEFVTGGFGY---GLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT-V 233 (343)
Q Consensus 159 ~v~~~~~~~-~~~l~t~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~-v 233 (343)
...+++|+| ++.++++..++ .|.+||+.. ++.+..+... ....+++|+|++..+++++..++. |
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~---~~~~~~~~~~--------~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 85 SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK---NKFISTIPIP--------YDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp CCCCEEECTTSSEEEECCCSSSSCEEEEEETTT---TEEEEEEECC--------TTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred CccceEECCCCCEEEEecCCCCcccEEEEECCC---CCeEEEEECC--------CCccceEECCCCCEEEEEecCCCceE
Confidence 344499999 66677444442 899999987 5655555432 347899999999888888888788 9
Q ss_pred EEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-c---cccc
Q 019258 234 FAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-P---FELL 309 (343)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~---~~~~ 309 (343)
.+|++........... . ..........++|+|++.. .++++..++.|++|+.... . ...+
T Consensus 154 ~~~~~~~~g~~~~~~~-~------~~~~~~~~~~~~~spdg~~---------l~v~~~~~~~v~v~d~~~~~~~~~~~~~ 217 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQ-E------FISGGTRPFNITFTPDGNF---------AFVANLIGNSIGILETQNPENITLLNAV 217 (331)
T ss_dssp EEEEECTTCCEEEEEE-E------EECSSSSEEEEEECTTSSE---------EEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred EEEEECCCCcEeecCC-c------cccCCCCccceEECCCCCE---------EEEEeCCCCeEEEEECCCCcccceeeec
Confidence 9999875332211100 0 0112345789999999874 4556667899999997532 2 2333
Q ss_pred ccccccceeeecCCCCCeeEEc-cCCceEEEEe
Q 019258 310 AEPCAINSFDIDPQNPSDVICS-LEWESIAIVS 341 (343)
Q Consensus 310 ~~~~~i~s~~~~~~~~~~l~~~-~~~~~i~~~~ 341 (343)
.....+..+.++| +|++|+.+ ..++.|++|+
T Consensus 218 ~~~~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 218 GTNNLPGTIVVSR-DGSTVYVLTESTVDVFNFN 249 (331)
T ss_dssp ECSSCCCCEEECT-TSSEEEEECSSEEEEEEEE
T ss_pred cCCCCCceEEECC-CCCEEEEEEcCCCEEEEEE
Confidence 3456678999999 56755544 4567888886
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.71 E-value=1e-15 Score=155.44 Aligned_cols=285 Identities=8% Similarity=-0.015 Sum_probs=189.7
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCC-CCCCceeeeeCCCCCCCCCCccCCCCCCe-------eEEEcc-CCCeEE
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTD-ADSPSLETHSISLPASLTPHSQWTPPTRI-------SSLSTS-HQSLVA 86 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~-~~~~~l~~w~~~~~~~~~~~~~~~~~~~v-------~~v~~~-~~~~l~ 86 (343)
.|...|..++|+| ++++||.++.+.. .+...|++|++.... ......|.+.+ .+++|+ ++.+++
T Consensus 50 ~~~~~v~~~~~SP----DG~~la~~s~~~~~~~~~~i~~~d~~~g~---~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~ 122 (1045)
T 1k32_A 50 SNLGVINNARFFP----DGRKIAIRVMRGSSLNTADLYFYNGENGE---IKRITYFSGKSTGRRMFTDVAGFDPDGNLII 122 (1045)
T ss_dssp CSSSEEEEEEECT----TSSEEEEEEEESTTCCEEEEEEEETTTTE---EEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred eCCCcccCeEECC----CCCEEEEEEeeccCCCCCeEEEEECCCCC---eEEcccCCCcccccccccccccCCCCCEEEE
Confidence 4677899999999 9999999887621 122358899986532 22233456666 899999 777777
Q ss_pred EEcCC----C--cEEEEEccCceeeeeec----------------------------------------------cCCcc
Q 019258 87 ASTLS----G--SLHVLSSAMQVLLSVDE----------------------------------------------NSGFH 114 (343)
Q Consensus 87 ~~s~d----g--~v~v~~~~~~~~~~~~~----------------------------------------------~~~~h 114 (343)
+++.+ + .|.+|++...+...+.. ....|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~ 202 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 202 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECC
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCC
Confidence 77654 3 46666665332211100 00236
Q ss_pred ccCeEEEEec-CCEEEEEeCCCcEEEEECCC-CceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCC
Q 019258 115 VGPISGVDLT-GSECVSVGEDGRVNLVSVIG-GGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSG 191 (343)
Q Consensus 115 ~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~ 191 (343)
.+.+.++.|+ ...+++++.|+++++|+++. +..... +..+. .+...+|+| +..++.+ .++.|.+||+..
T Consensus 203 ~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~-l~~~~--~~~~~~~SpDG~~la~~-~~~~i~~~d~~~---- 274 (1045)
T 1k32_A 203 STHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRK-HTSFT--DYYPRHLNTDGRRILFS-KGGSIYIFNPDT---- 274 (1045)
T ss_dssp SSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEE-CCCCC--SSCEEEEEESSSCEEEE-ETTEEEEECTTT----
T ss_pred CCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceE-ecCCC--CcceeeEcCCCCEEEEE-eCCEEEEecCCc----
Confidence 6778888888 44455777889999998754 222333 33343 356678888 6666666 599999999833
Q ss_pred CCeeEEecccCCCC----CcccCeEEEEEc-CCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccc-cE
Q 019258 192 GPVLQFKGNFGSQG----KASGMIHSVDIH-PSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSES-EV 265 (343)
Q Consensus 192 ~~~~~~~~~~~~~~----~~~~~i~~v~~~-p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-~v 265 (343)
..+..+........ .+...+.+++|+ |++..++ .++ ++.|.+||+.... ... . ..|.. .+
T Consensus 275 ~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la-~~~-~~~i~~~~~~~~~-~~~-~----------~~~~~~~~ 340 (1045)
T 1k32_A 275 EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIA-FVS-RGQAFIQDVSGTY-VLK-V----------PEPLRIRY 340 (1045)
T ss_dssp CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEE-EEE-TTEEEEECTTSSB-EEE-C----------SCCSCEEE
T ss_pred eEeeeeccCcccccccccccccccceeeecCCCCCEEE-EEE-cCEEEEEcCCCCc-eEE-c----------cCCCcceE
Confidence 44444433110000 011358899999 9987664 444 8899999987643 222 2 34566 89
Q ss_pred EEEEEeecCCCCcCCCCCccceEEEecCCeEE-EEecCCC-cccccccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 266 WEVQYDCHTKSSNISSSRVLPAMFCSEDGILA-VVEQGEE-PFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 266 ~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~-~~~~~~~-~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
..++|+ ++. .+++++.++.|+ +|+.... ...+..+...+.++.|+| +|++|++++.++.|++|+
T Consensus 341 ~~~~~s-dg~----------~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 341 VRRGGD-TKV----------AFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp EEECSS-SEE----------EEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred EeeeEc-CCC----------eEEEEECCCceEEEEECCCCCceEecCCccceeeeEECC-CCCEEEEECCCCeEEEEE
Confidence 999999 776 688888888999 9987543 233333346789999999 679999999999999986
No 153
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=1.4e-14 Score=128.44 Aligned_cols=240 Identities=10% Similarity=-0.000 Sum_probs=160.2
Q ss_pred CCCCCeeEEEcc-CCCeEEEEcC-------CCcEEEEEccCceeeeeeccCCccccCeEEEEec--CC-EEEEEeCCCcE
Q 019258 69 TPPTRISSLSTS-HQSLVAASTL-------SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GS-ECVSVGEDGRV 137 (343)
Q Consensus 69 ~~~~~v~~v~~~-~~~~l~~~s~-------dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~-~~~s~s~dg~v 137 (343)
+....+..++|+ +++.+++++. ++.|.+||....+....... ...+.++.++ ++ .+++...++.|
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN----DLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE----SSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec----CCCcceEEECCCCCEEEEEecCCCEE
Confidence 344567889999 7777777774 56899999886554433321 2235667776 66 45566678999
Q ss_pred EEEECCCCceEEEEEcCCCcc--------ceEEEEeCC-CCEEEEEe--CCCcEEEEEccccCCCCCeeEEecccCCCCC
Q 019258 138 NLVSVIGGGEFKRVYDGNGLV--------GFNCVKWAS-PTEFVTGG--FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGK 206 (343)
Q Consensus 138 ~~wd~~~~~~~~~~~~~~~~~--------~v~~~~~~~-~~~l~t~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 206 (343)
.+||..+++ ....+..+... .+.++.|+| ++.++.++ .++.|.+||+.. ++.+..+....
T Consensus 114 ~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~---~~~~~~~~~~~----- 184 (353)
T 3vgz_A 114 TAIDAKTGE-VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN---IKLKTAIQNTG----- 184 (353)
T ss_dssp EEEETTTCC-EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT---TEEEEEECCCC-----
T ss_pred EEEeCCCCe-eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC---CceEEEecCCC-----
Confidence 999999885 44433333211 268899999 66666655 488999999987 55555554232
Q ss_pred cccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccc
Q 019258 207 ASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLP 286 (343)
Q Consensus 207 ~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~ 286 (343)
..+.+++|+|++..+ ++++.++.|.+||+.+.+....+.... ..+...+..++|+|++.. .
T Consensus 185 --~~~~~~~~s~dg~~l-~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~s~dg~~---------l 245 (353)
T 3vgz_A 185 --KMSTGLALDSEGKRL-YTTNADGELITIDTADNKILSRKKLLD-------DGKEHFFINISLDTARQR---------A 245 (353)
T ss_dssp --TTCCCCEEETTTTEE-EEECTTSEEEEEETTTTEEEEEEECCC-------SSSCCCEEEEEEETTTTE---------E
T ss_pred --CccceEEECCCCCEE-EEEcCCCeEEEEECCCCeEEEEEEcCC-------CCCCcccceEEECCCCCE---------E
Confidence 447889999998765 456779999999998865444433111 235567889999999884 3
Q ss_pred eEEEecCCeEEEEecCCC-cccccccccccceeeecCCCCCee-EEccCCceEEEEeC
Q 019258 287 AMFCSEDGILAVVEQGEE-PFELLAEPCAINSFDIDPQNPSDV-ICSLEWESIAIVSR 342 (343)
Q Consensus 287 l~s~s~dg~i~~~~~~~~-~~~~~~~~~~i~s~~~~~~~~~~l-~~~~~~~~i~~~~~ 342 (343)
+++...++.|++|+.... .......+.+ ..+.++| +++++ ++...++.|.+|+.
T Consensus 246 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~-dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNP-ARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp EEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEET-TTTEEEEEETTTTEEEEEET
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECC-CCCEEEEEECCCCeEEEEEC
Confidence 444455699999997533 2222222333 5688998 45644 44446789999863
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.69 E-value=3.7e-14 Score=126.71 Aligned_cols=251 Identities=10% Similarity=0.021 Sum_probs=156.8
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCC-CCCCCCccCC-CCCCeeEEEccCCCeEEEEc-CCCc
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLP-ASLTPHSQWT-PPTRISSLSTSHQSLVAAST-LSGS 93 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~-~~~~~~~~~~-~~~~v~~v~~~~~~~l~~~s-~dg~ 93 (343)
+...+..++|+| ++++|++++.++. +.-.+.+|++... .....+.... +......+++ +++.|++++ .++.
T Consensus 48 ~~~~p~~l~~sp----dg~~l~~~~~~~~-~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~ 121 (361)
T 3scy_A 48 EVANPSYLIPSA----DGKFVYSVNEFSK-DQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGS 121 (361)
T ss_dssp ECSCCCSEEECT----TSSEEEEEECCSS-TTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTE
T ss_pred cCCCCceEEECC----CCCEEEEEEccCC-CCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCE
Confidence 566778899999 8898998887631 1114678887543 2222233322 3445667777 677776665 5889
Q ss_pred EEEEEccCceeeeee----cc-------CCccccCeEEEEec--CCEEEE-EeCCCcEEEEECCCCce------E-----
Q 019258 94 LHVLSSAMQVLLSVD----EN-------SGFHVGPISGVDLT--GSECVS-VGEDGRVNLVSVIGGGE------F----- 148 (343)
Q Consensus 94 v~v~~~~~~~~~~~~----~~-------~~~h~~~v~~~~~~--~~~~~s-~s~dg~v~~wd~~~~~~------~----- 148 (343)
|.+|++.....+... .. ...+...+.++.|+ ++.++. ...++.|.+|+++.... +
T Consensus 122 v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 122 ITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp EEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred EEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 999999733222111 00 11123346889998 665554 44689999999875421 1
Q ss_pred -EEEEcCCCccceEEEEeCC-CCEEEEEe-CCCcEEEEEccccCCCCC--eeEEecccCCCCCcccCeEEEEEcCCCCeE
Q 019258 149 -KRVYDGNGLVGFNCVKWAS-PTEFVTGG-FGYGLQWWDLRRAGSGGP--VLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 149 -~~~~~~~~~~~v~~~~~~~-~~~l~t~~-~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~ 223 (343)
......... ....++|+| ++.+++++ .++.|.+||+.. +.. +..+....... .....++|+|+++.+
T Consensus 202 ~~~~~~~~~~-~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~---g~~~~~~~~~~~~~~~----~~~~~i~~spdg~~l 273 (361)
T 3scy_A 202 PEAFKVAPGS-GPRHLIFNSDGKFAYLINEIGGTVIAFRYAD---GMLDEIQTVAADTVNA----QGSGDIHLSPDGKYL 273 (361)
T ss_dssp EEEEECCTTC-CEEEEEECTTSSEEEEEETTTCEEEEEEEET---TEEEEEEEEESCSSCC----CCEEEEEECTTSSEE
T ss_pred ccceecCCCC-CCeEEEEcCCCCEEEEEcCCCCeEEEEEecC---CceEEeEEEecCCCCC----CCcccEEECCCCCEE
Confidence 122222232 688999999 66666666 599999999976 322 22232222111 346899999999887
Q ss_pred EEEEec-CCcEEEEEccC--Cce-eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-cCCeEEE
Q 019258 224 CLAGGS-SGTVFAWDLRW--QQQ-SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-EDGILAV 298 (343)
Q Consensus 224 ~~sg~~-dg~v~iwd~~~--~~~-~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-~dg~i~~ 298 (343)
+++... ++.|.+|++.. +.. ..... .. ...+..++|+|++. +|++++ .++.|.+
T Consensus 274 ~v~~~~~~~~i~v~~~~~~~g~~~~~~~~----------~~-g~~~~~~~~spdg~----------~l~~~~~~~~~v~v 332 (361)
T 3scy_A 274 YASNRLKADGVAIFKVDETNGTLTKVGYQ----------LT-GIHPRNFIITPNGK----------YLLVACRDTNVIQI 332 (361)
T ss_dssp EEEECSSSCEEEEEEECTTTCCEEEEEEE----------EC-SSCCCEEEECTTSC----------EEEEEETTTTEEEE
T ss_pred EEECCCCCCEEEEEEEcCCCCcEEEeeEe----------cC-CCCCceEEECCCCC----------EEEEEECCCCCEEE
Confidence 666666 68999999962 221 12222 11 34677899999988 566665 6788988
Q ss_pred EecC
Q 019258 299 VEQG 302 (343)
Q Consensus 299 ~~~~ 302 (343)
|+.+
T Consensus 333 ~~~d 336 (361)
T 3scy_A 333 FERD 336 (361)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 6543
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.68 E-value=1.1e-14 Score=128.09 Aligned_cols=237 Identities=11% Similarity=-0.008 Sum_probs=153.8
Q ss_pred ccccCCccc---ceeeEEecCCCCCCCCeE-EEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCC------CeeEEEcc
Q 019258 11 QVHRFPQSK---YIDAVRWLPPLSPLSKLA-VLAIYDTDADSPSLETHSISLPASLTPHSQWTPPT------RISSLSTS 80 (343)
Q Consensus 11 ~~~~~~~~~---~i~~v~w~p~~~~~~~~l-~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~------~v~~v~~~ 80 (343)
.+..++... .+..++|+| +++.+ ++++.++ .|++|++.... ....+.... .+.+++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~s~----dg~~l~v~~~~~~-----~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~s 90 (337)
T 1pby_B 23 VDKVITIADAGPTPMVPMVAP----GGRIAYATVNKSE-----SLVKIDLVTGE---TLGRIDLSTPEERVKSLFGAALS 90 (337)
T ss_dssp EEEEEECTTCTTCCCCEEECT----TSSEEEEEETTTT-----EEEEEETTTCC---EEEEEECCBTTEEEECTTCEEEC
T ss_pred EEEEEEcCCCCCCccceEEcC----CCCEEEEEeCCCC-----eEEEEECCCCC---eEeeEEcCCcccccccccceEEC
Confidence 344455455 688999999 77655 4544443 47899985532 222222222 67889999
Q ss_pred -CCCeEEEEc------------CCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCC
Q 019258 81 -HQSLVAAST------------LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGG 145 (343)
Q Consensus 81 -~~~~l~~~s------------~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~ 145 (343)
+++.|+++. .++.|.+|++...+....... ...+.++.|+ ++.++++ ++.|.+||+.++
T Consensus 91 ~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~ 164 (337)
T 1pby_B 91 PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA----PRQITMLAWARDGSKLYGL--GRDLHVMDPEAG 164 (337)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC----CSSCCCEEECTTSSCEEEE--SSSEEEEETTTT
T ss_pred CCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC----CCCcceeEECCCCCEEEEe--CCeEEEEECCCC
Confidence 777888876 579999999986554433321 2346677787 6667776 688999999988
Q ss_pred ceEEEEEcCCCccceEEEEeCC-CCEEEEEeC-CC-----------------------cEEEEEccccCCCCCe-eEEec
Q 019258 146 GEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGF-GY-----------------------GLQWWDLRRAGSGGPV-LQFKG 199 (343)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~-d~-----------------------~i~iwd~~~~~~~~~~-~~~~~ 199 (343)
+ ....+..+.. ...+.|+| +..++..+. ++ .|.+||+.. ++.. ..+..
T Consensus 165 ~-~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~---~~~~~~~~~~ 238 (337)
T 1pby_B 165 T-LVEDKPIQSW--EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET---GEMAMREVRI 238 (337)
T ss_dssp E-EEEEECSTTT--TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT---CCEEEEEEEE
T ss_pred c-Eeeeeecccc--CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC---CCceEeecCC
Confidence 5 4444433321 11225666 443333322 22 478999987 4443 11222
Q ss_pred ccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcC
Q 019258 200 NFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNI 279 (343)
Q Consensus 200 ~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 279 (343)
+. ..+.+++|+|++..+++ + ++.|.+||+.+.+....+. ....+.+++|+|++.
T Consensus 239 ~~-------~~~~~~~~s~dg~~l~~-~--~~~v~~~d~~~~~~~~~~~------------~~~~~~~~~~s~dg~---- 292 (337)
T 1pby_B 239 MD-------VFYFSTAVNPAKTRAFG-A--YNVLESFDLEKNASIKRVP------------LPHSYYSVNVSTDGS---- 292 (337)
T ss_dssp CS-------SCEEEEEECTTSSEEEE-E--ESEEEEEETTTTEEEEEEE------------CSSCCCEEEECTTSC----
T ss_pred CC-------CceeeEEECCCCCEEEE-e--CCeEEEEECCCCcCcceec------------CCCceeeEEECCCCC----
Confidence 21 45889999999876654 4 6899999998754433332 234578999999987
Q ss_pred CCCCccceEEEecCCeEEEEecCC
Q 019258 280 SSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 280 ~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
.|++++.++.|.+|+...
T Consensus 293 ------~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 293 ------TVWLGGALGDLAAYDAET 310 (337)
T ss_dssp ------EEEEESBSSEEEEEETTT
T ss_pred ------EEEEEcCCCcEEEEECcC
Confidence 678888999999999753
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.67 E-value=2.7e-14 Score=126.35 Aligned_cols=239 Identities=8% Similarity=-0.024 Sum_probs=150.0
Q ss_pred EEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEE-EEEeCCCcEEEEECCCCceEEEEE
Q 019258 77 LSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSEC-VSVGEDGRVNLVSVIGGGEFKRVY 152 (343)
Q Consensus 77 v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~-~s~s~dg~v~~wd~~~~~~~~~~~ 152 (343)
+++. ++.++++++.++.|++||....+.+...... ....+..+.++ ++.+ ++...++.|.+||+.+++....+.
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP--DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECS--SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC--CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 3455 5677888999999999999866554433321 21246678887 6554 566678999999999885333332
Q ss_pred cCCC----ccceEEEEeCC-CCEEEEEeCC------------CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEE
Q 019258 153 DGNG----LVGFNCVKWAS-PTEFVTGGFG------------YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVD 215 (343)
Q Consensus 153 ~~~~----~~~v~~~~~~~-~~~l~t~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 215 (343)
..+. ...+.+++|+| ++.+++++.+ +.|.+||+..+...+.+..+... ..+.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~~ 154 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP--------RQVYLMR 154 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC--------SSCCCEE
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC--------Cccccee
Confidence 2221 22478899999 7778877755 99999999771111222223221 3488999
Q ss_pred EcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcc-------------------------c--c-----------
Q 019258 216 IHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEA-------------------------V--T----------- 257 (343)
Q Consensus 216 ~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~-------------------------~--~----------- 257 (343)
|+|++. +++ ++ +.|.+||+++++....+........ + .
T Consensus 155 ~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 230 (349)
T 1jmx_B 155 AADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD 230 (349)
T ss_dssp ECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE
T ss_pred ECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc
Confidence 999987 655 33 3499999987554332221000000 0 0
Q ss_pred -------------------cCCccccEEEEEEee-cCCCCcCCCCCccceEEEecCCeEEEEecCCC-cccccccccccc
Q 019258 258 -------------------HSLSESEVWEVQYDC-HTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFELLAEPCAIN 316 (343)
Q Consensus 258 -------------------~~~h~~~v~~v~~~p-~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~~~~~~~i~ 316 (343)
...+...+..++|+| ++. .++++ ++.|++|+.... ..........+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~----------~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~ 298 (349)
T 1jmx_B 231 LLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN----------QIYGV--LNRLAKYDLKQRKLIKAANLDHTYY 298 (349)
T ss_dssp EEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT----------EEEEE--ESEEEEEETTTTEEEEEEECSSCCC
T ss_pred cceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC----------EEEEE--cCeEEEEECccCeEEEEEcCCCCcc
Confidence 000111345667777 765 56655 889999997543 223333345678
Q ss_pred eeeecCCCCCeeEEccCCceEEEEeC
Q 019258 317 SFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 317 s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
++.++| ++++|++++.++.|++|+-
T Consensus 299 ~~~~s~-dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 299 CVAFDK-KGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp EEEECS-SSSCEEEESBSSEEEEEET
T ss_pred ceEECC-CCCEEEEecCCCeEEEEec
Confidence 999998 5677777777899999873
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.66 E-value=8e-15 Score=129.79 Aligned_cols=230 Identities=10% Similarity=0.062 Sum_probs=149.2
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCC--CeeEEEcc-CCCeE-EEEcCCCcEEEEEccCceeeeee
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPT--RISSLSTS-HQSLV-AASTLSGSLHVLSSAMQVLLSVD 108 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~--~v~~v~~~-~~~~l-~~~s~dg~v~v~~~~~~~~~~~~ 108 (343)
++.++++++.++. |++||+.... ....+.... .+..++|+ +++.+ ++...++.|.+|++...+.....
T Consensus 10 ~~~~~v~~~~~~~-----v~~~d~~~~~---~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 10 GHEYMIVTNYPNN-----LHVVDVASDT---VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp TCEEEEEEETTTE-----EEEEETTTTE---EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCe-----EEEEECCCCc---EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 7788899888754 7799985532 222333333 67899999 66654 55567899999999865544333
Q ss_pred ccCCc---cccCeEEEEec--CCEEEEEeCC------------CcEEEEECCCCc--eEEEEEcCCCccceEEEEeCC-C
Q 019258 109 ENSGF---HVGPISGVDLT--GSECVSVGED------------GRVNLVSVIGGG--EFKRVYDGNGLVGFNCVKWAS-P 168 (343)
Q Consensus 109 ~~~~~---h~~~v~~~~~~--~~~~~s~s~d------------g~v~~wd~~~~~--~~~~~~~~~~~~~v~~~~~~~-~ 168 (343)
..... +...+.++.|+ ++.+++++.+ +.|.+||+.+++ ........+. .+.+++|+| +
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~s~dg 159 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR--QVYLMRAADDG 159 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS--SCCCEEECTTS
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC--cccceeECCCC
Confidence 22100 02336778887 7788888765 899999998742 1223333333 488899999 5
Q ss_pred CEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCC----------------C--------------------------
Q 019258 169 TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQG----------------K-------------------------- 206 (343)
Q Consensus 169 ~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~----------------~-------------------------- 206 (343)
. +++++ +.|.+||+.. ++....+........ .
T Consensus 160 ~-l~~~~--~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 233 (349)
T 1jmx_B 160 S-LYVAG--PDIYKMDVKT---GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLY 233 (349)
T ss_dssp C-EEEES--SSEEEECTTT---CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEE
T ss_pred c-EEEcc--CcEEEEeCCC---CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccce
Confidence 5 55554 3499999977 554444432210000 0
Q ss_pred -------------------cccCeEEEEEcC-CCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEE
Q 019258 207 -------------------ASGMIHSVDIHP-SRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVW 266 (343)
Q Consensus 207 -------------------~~~~i~~v~~~p-~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 266 (343)
....+..++++| ++..++ ++ ++.|.+||+++.+....+. ....+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~-~~--~~~v~~~d~~~~~~~~~~~------------~~~~~~ 298 (349)
T 1jmx_B 234 GYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIY-GV--LNRLAKYDLKQRKLIKAAN------------LDHTYY 298 (349)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEE-EE--ESEEEEEETTTTEEEEEEE------------CSSCCC
T ss_pred eEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEE-EE--cCeEEEEECccCeEEEEEc------------CCCCcc
Confidence 001356778889 887654 44 7899999998854433332 223467
Q ss_pred EEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 267 EVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 267 ~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
.++|+|++. .|++++.++.|++|+...
T Consensus 299 ~~~~s~dg~----------~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 299 CVAFDKKGD----------KLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEEECSSSS----------CEEEESBSSEEEEEETTT
T ss_pred ceEECCCCC----------EEEEecCCCeEEEEeccc
Confidence 899999987 577788899999999753
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.64 E-value=1.3e-14 Score=138.22 Aligned_cols=228 Identities=13% Similarity=0.034 Sum_probs=152.4
Q ss_pred CCCeeEEEcc-CCCeEEEEcC-CCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeC---CCcEEEEECCC
Q 019258 71 PTRISSLSTS-HQSLVAASTL-SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGE---DGRVNLVSVIG 144 (343)
Q Consensus 71 ~~~v~~v~~~-~~~~l~~~s~-dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~---dg~v~~wd~~~ 144 (343)
..+|.++.|+ +++.|+.++. ||+++||++..++...+. ..+...+..+.|+ ++.+++++. +....+|.++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt---~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLN---REPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECC---SSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeee---cccccccccccCCCCeEEEEeccCCCCcceEEEEEec
Confidence 3469999999 8899998887 999999998654433322 1233578899998 644555554 45566665533
Q ss_pred --CceEEEEEcCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCC
Q 019258 145 --GGEFKRVYDGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSR 220 (343)
Q Consensus 145 --~~~~~~~~~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~ 220 (343)
......+.. ... ....+|+| ...+++.+.++.+.+||+.. ++ ...+.... . .+++|+|+|
T Consensus 98 ~~~g~~~~l~~-~~~--~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~---g~-~~~l~~~~-------~--~~~~~spDG 161 (582)
T 3o4h_A 98 SRPGEEQRLEA-VKP--MRILSGVDTGEAVVFTGATEDRVALYALDG---GG-LRELARLP-------G--FGFVSDIRG 161 (582)
T ss_dssp TSTTCCEECTT-SCS--BEEEEEEECSSCEEEEEECSSCEEEEEEET---TE-EEEEEEES-------S--CEEEEEEET
T ss_pred cCCCccccccC-CCC--ceeeeeCCCCCeEEEEecCCCCceEEEccC---Cc-EEEeecCC-------C--ceEEECCCC
Confidence 212233322 222 33445555 44555555666666999977 43 33443222 2 789999999
Q ss_pred CeEEEEEecC----CcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCC--
Q 019258 221 KHTCLAGGSS----GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG-- 294 (343)
Q Consensus 221 ~~~~~sg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg-- 294 (343)
+.+ ++++.+ +.|++||+.+++. .. + ..|...+..++|+|++. .|+++..+|
T Consensus 162 ~~l-a~~~~~~~~~~~i~~~d~~~g~~-~~-l----------~~~~~~~~~~~~SpDG~----------~l~~~~~~~~~ 218 (582)
T 3o4h_A 162 DLI-AGLGFFGGGRVSLFTSNLSSGGL-RV-F----------DSGEGSFSSASISPGMK----------VTAGLETAREA 218 (582)
T ss_dssp TEE-EEEEEEETTEEEEEEEETTTCCC-EE-E----------CCSSCEEEEEEECTTSC----------EEEEEECSSCE
T ss_pred CEE-EEEEEcCCCCeEEEEEcCCCCCc-eE-e----------ecCCCccccceECCCCC----------EEEEccCCCee
Confidence 865 445555 6799999887543 22 2 35778899999999998 677888888
Q ss_pred eEEEEecCCCccccccc-ccccceee--------ecCCCCCeeEEccCCceEEEEe
Q 019258 295 ILAVVEQGEEPFELLAE-PCAINSFD--------IDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 295 ~i~~~~~~~~~~~~~~~-~~~i~s~~--------~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
.|++|+.......++.. ...+.++. |+| +|..++++++++.+.+|.
T Consensus 219 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 219 RLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLP-DGRLAVVARREGRSAVFI 273 (582)
T ss_dssp EEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECT-TSCEEEEEEETTEEEEEE
T ss_pred EEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcC-CCcEEEEEEcCCcEEEEE
Confidence 89999975433333333 34566677 999 458889999999999885
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.59 E-value=1.5e-12 Score=117.17 Aligned_cols=273 Identities=8% Similarity=-0.074 Sum_probs=164.2
Q ss_pred EEecCCCCCCCCeEEEEee-cCCCCCCceeeeeCCCCCCCCCCccC-CCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEcc
Q 019258 24 VRWLPPLSPLSKLAVLAIY-DTDADSPSLETHSISLPASLTPHSQW-TPPTRISSLSTS-HQSLVAASTLSGSLHVLSSA 100 (343)
Q Consensus 24 v~w~p~~~~~~~~l~t~s~-D~~~~~~~l~~w~~~~~~~~~~~~~~-~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~ 100 (343)
.+|+| +++.|+.++. ++ ...|++|++...... ... .+...+..+.|+ +++.|+.++.++.|++|++.
T Consensus 41 ~~~Sp----Dg~~l~~~~~~~g---~~~l~~~d~~~g~~~---~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 41 KCFTR----DGSKLLFGGAFDG---PWNYYLLDLNTQVAT---QLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp CCBCT----TSCEEEEEECTTS---SCEEEEEETTTCEEE---ECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETT
T ss_pred ccCCC----CCCEEEEEEcCCC---CceEEEEeCCCCceE---EeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECC
Confidence 78999 8999998886 43 235888888553221 112 233344567899 88899999999999999998
Q ss_pred CceeeeeeccCCccccCeEEEEe--c--CCEEEEE----------------------eCCCcEEEEECCCCceEEEEEcC
Q 019258 101 MQVLLSVDENSGFHVGPISGVDL--T--GSECVSV----------------------GEDGRVNLVSVIGGGEFKRVYDG 154 (343)
Q Consensus 101 ~~~~~~~~~~~~~h~~~v~~~~~--~--~~~~~s~----------------------s~dg~v~~wd~~~~~~~~~~~~~ 154 (343)
..+...+... +.+.+....| + +..++.. ..+..|.+||+.+++ ...+...
T Consensus 111 ~g~~~~~~~~---~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~ 186 (388)
T 3pe7_A 111 TLEENVVYQV---PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-STVILQE 186 (388)
T ss_dssp TCCEEEEEEC---CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC-EEEEEEE
T ss_pred CCcceeeeec---hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc-eEEeecC
Confidence 6655444332 3333333333 3 5555532 245789999999874 5555443
Q ss_pred CCccceEEEEeCC--CCEEEEEeCC------CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEE
Q 019258 155 NGLVGFNCVKWAS--PTEFVTGGFG------YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLA 226 (343)
Q Consensus 155 ~~~~~v~~~~~~~--~~~l~t~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~s 226 (343)
.. .+..+.|+| +..++.+..+ ..|.++|+.. .....+..... ...+..++|+|++..++..
T Consensus 187 ~~--~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~----~~~~~l~~~~~-----~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 187 NQ--WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG----TNMRKVKTHAE-----GESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp SS--CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS----CCCEESCCCCT-----TEEEEEEEECTTSSCEEEE
T ss_pred Cc--cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC----CceEEeeeCCC-----CcccccceECCCCCEEEEE
Confidence 33 488999999 4456666553 3677777654 33334332210 0247788999999877555
Q ss_pred EecCC----cEEEEEccCCceeeeeecCCCCcccccCCcccc---EEEEEEeecCCCCcCCCCCccceEEE---------
Q 019258 227 GGSSG----TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESE---VWEVQYDCHTKSSNISSSRVLPAMFC--------- 290 (343)
Q Consensus 227 g~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~---v~~v~~~p~~~~~~~~~~~~~~l~s~--------- 290 (343)
+..++ .|++||+.+++....... ..+... ...+.|+|++.. |+..
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~---------~~~~~~~~~~~~~~~spdg~~----------l~~~~~~~~~~~~ 316 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQLTSM---------PACSHLMSNYDGSLMVGDGSD----------APVDVQDDSGYKI 316 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEEEEEE---------CCEEEEEECTTSSEEEEEECC----------C------------
T ss_pred ecCCCCCcceEEEEecCCCceEEEEcC---------CCceeeeecCCCCeEccCCCc----------ceeEeeecccccc
Confidence 55433 399999987643221110 111111 112379999884 4432
Q ss_pred ecCCeEEEEecCCCccccccc-cc-----------ccceeeecCCCCCeeEEccC-Cc--eEEEEe
Q 019258 291 SEDGILAVVEQGEEPFELLAE-PC-----------AINSFDIDPQNPSDVICSLE-WE--SIAIVS 341 (343)
Q Consensus 291 s~dg~i~~~~~~~~~~~~~~~-~~-----------~i~s~~~~~~~~~~l~~~~~-~~--~i~~~~ 341 (343)
..+..|++|+........+.. .. .+.++.|+| +|+.|+.+++ ++ .||.++
T Consensus 317 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~sp-Dg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 317 ENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTP-DDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECT-TSSEEEEEECTTSSCEEEEEE
T ss_pred CCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCC-CCCEEEEEecCCCceeEEEEE
Confidence 456689999976443333332 33 478889999 5677776654 34 344443
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.58 E-value=1.9e-14 Score=140.38 Aligned_cols=272 Identities=12% Similarity=0.009 Sum_probs=161.8
Q ss_pred eeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCC----CeeEEEcc-CCCeEEEEcC------
Q 019258 22 DAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPT----RISSLSTS-HQSLVAASTL------ 90 (343)
Q Consensus 22 ~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~----~v~~v~~~-~~~~l~~~s~------ 90 (343)
..++|+| ++.+++++ .|+ .|++|++..... ...+.+.. .+.+++|+ ++++|+.++.
T Consensus 19 ~~~~~s~----dg~~~~~~-~d~-----~i~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~ 85 (719)
T 1z68_A 19 FFPNWIS----GQEYLHQS-ADN-----NIVLYNIETGQS---YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWR 85 (719)
T ss_dssp CCCEESS----SSEEEEEC-TTS-----CEEEEESSSCCE---EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSS
T ss_pred CccEECC----CCeEEEEc-CCC-----CEEEEEcCCCcE---EEEEccccccccceeeEEECCCCCeEEEEecCceeEE
Confidence 4789999 77655544 454 388999965332 22222221 38999999 8888888876
Q ss_pred ---CCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccce-----
Q 019258 91 ---SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGF----- 160 (343)
Q Consensus 91 ---dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v----- 160 (343)
++.|++|++..++.+.... ....+..+.|+ |+.|+.+. |+.|++||+.+++ ..++........+
T Consensus 86 ~s~~~~i~~~d~~~g~~~~~~~----l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~-~~~l~~~~~~~~v~~g~~ 159 (719)
T 1z68_A 86 YSYTATYYIYDLSNGEFVRGNE----LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDP-PFQITFNGRENKIFNGIP 159 (719)
T ss_dssp SCEEEEEEEEETTTTEECCSSC----CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSC-CEECCCCCBTTTEEESSC
T ss_pred eecceEEEEEECCCCcccccee----cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCC-cEEEecCCCcCCeEcccc
Confidence 7899999998665411011 12457889998 88888875 7899999998874 3433221111012
Q ss_pred ------------EEEEeCC-CCEEEEEeCCC----------------------------------cEEEEEccccCCCCC
Q 019258 161 ------------NCVKWAS-PTEFVTGGFGY----------------------------------GLQWWDLRRAGSGGP 193 (343)
Q Consensus 161 ------------~~~~~~~-~~~l~t~~~d~----------------------------------~i~iwd~~~~~~~~~ 193 (343)
.+++|+| +..|++++.|. .|++||+.. ++.
T Consensus 160 ~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~---~~~ 236 (719)
T 1z68_A 160 DWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY---PAY 236 (719)
T ss_dssp CHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC---HHH
T ss_pred cceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC---CCc
Confidence 4899999 78888887652 788999876 332
Q ss_pred e--eEE------ecccCCCCCcccCeEEEEEcCCCCeEEEEEecC----CcEEEEE----ccCCceeeeeecCCCCcccc
Q 019258 194 V--LQF------KGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS----GTVFAWD----LRWQQQSIVLSGVGTGEAVT 257 (343)
Q Consensus 194 ~--~~~------~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d----g~v~iwd----~~~~~~~~~~~~~~~~~~~~ 257 (343)
. ..+ ..+. ..+..++|+|++ .++++.... ..|.+|| +.+++. ..+.. ..
T Consensus 237 ~~~~~~~~~~~~~~~~-------~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~-~~~~~------~~ 301 (719)
T 1z68_A 237 VGPQEVPVPAMIASSD-------YYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTWDC-PKTQE------HI 301 (719)
T ss_dssp HCCEECCCCHHHHTSC-------EEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSEEC-CGGGE------EE
T ss_pred cceeEccCCccCCCCc-------ceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCCce-EEEEe------cc
Confidence 1 111 1122 668999999996 455554332 2488899 655322 11110 00
Q ss_pred cCCccccEE-----EEEEeecCCCCcCCCCCccceE-EEecCC--eEEEEecCCCc-ccccccccccceeeecCCCCCee
Q 019258 258 HSLSESEVW-----EVQYDCHTKSSNISSSRVLPAM-FCSEDG--ILAVVEQGEEP-FELLAEPCAINSFDIDPQNPSDV 328 (343)
Q Consensus 258 ~~~h~~~v~-----~v~~~p~~~~~~~~~~~~~~l~-s~s~dg--~i~~~~~~~~~-~~~~~~~~~i~s~~~~~~~~~~l 328 (343)
...|...+. .+.|+|++.. .++ +...+| .|++|+..... ..+......+.++.+. +++..+
T Consensus 302 ~~~~~~~~~~~~~~~~~~spdg~~---------l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~ 371 (719)
T 1z68_A 302 EESRTGWAGGFFVSTPVFSYDAIS---------YYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLF 371 (719)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSC---------EEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEE
T ss_pred cccCCceEccccCCccEECCCCCe---------EEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEE
Confidence 013555565 7899999873 233 344556 46777754332 2322223345555555 333344
Q ss_pred EEccC----CceEEEE
Q 019258 329 ICSLE----WESIAIV 340 (343)
Q Consensus 329 ~~~~~----~~~i~~~ 340 (343)
+.+.+ .+.+++|
T Consensus 372 ~~~~~~~~~~~~~~l~ 387 (719)
T 1z68_A 372 YSSNEFEEYPGRRNIY 387 (719)
T ss_dssp EEESCGGGCTTCBEEE
T ss_pred EEEecCCCCCceEEEE
Confidence 44433 3445554
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.57 E-value=1.8e-12 Score=116.11 Aligned_cols=244 Identities=10% Similarity=0.022 Sum_probs=148.6
Q ss_pred CCeeEEEcc-CCCeEEEEcCCCcEEEEEcc-CceeeeeeccCCccccCeEEEEec--CCE--EEEEe-------------
Q 019258 72 TRISSLSTS-HQSLVAASTLSGSLHVLSSA-MQVLLSVDENSGFHVGPISGVDLT--GSE--CVSVG------------- 132 (343)
Q Consensus 72 ~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~-~~~~~~~~~~~~~h~~~v~~~~~~--~~~--~~s~s------------- 132 (343)
..+..++|+ ++++|++++.+ .|.+|++. +++........ .+ +...++.++ ++. ++++.
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~-~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP-IG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE-CC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee-cC-CCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 468899999 78888888877 99999986 44433222110 01 223446666 553 34443
Q ss_pred CCCcEEEEECCC-CceEEEEEc---CCCccceEEEEeCC-CCEEEEEeC-CCcEEEEEcc-ccCCCCCe--eEEecccCC
Q 019258 133 EDGRVNLVSVIG-GGEFKRVYD---GNGLVGFNCVKWAS-PTEFVTGGF-GYGLQWWDLR-RAGSGGPV--LQFKGNFGS 203 (343)
Q Consensus 133 ~dg~v~~wd~~~-~~~~~~~~~---~~~~~~v~~~~~~~-~~~l~t~~~-d~~i~iwd~~-~~~~~~~~--~~~~~~~~~ 203 (343)
.+|++.+|++.. ++ ...... ......+.+++|+| ++.++++.. ++.|++||+. . ++.. ..+....
T Consensus 117 ~~g~v~v~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~---g~~~~~~~~~~~~-- 190 (365)
T 1jof_A 117 FAGYGNVFSVSETGK-LEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLAS---GEVELVGSVDAPD-- 190 (365)
T ss_dssp SCCEEEEEEECTTCC-EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT---SCEEEEEEEECSS--
T ss_pred CCceEEEEccCCCCc-CcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCC---CCEEEeeeEecCC--
Confidence 689999999974 43 322221 11222689999999 666666654 7899999997 4 3321 2222110
Q ss_pred CCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccC--Ccee---eeeecCCCCcccccCCccc------cEEEEE-Ee
Q 019258 204 QGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW--QQQS---IVLSGVGTGEAVTHSLSES------EVWEVQ-YD 271 (343)
Q Consensus 204 ~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~--~~~~---~~~~~~~~~~~~~~~~h~~------~v~~v~-~~ 271 (343)
+...+..++|+|+++.++++...++.|.+|++.. ++.. ..+...... ..+|.. .+..++ |+
T Consensus 191 ---~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~i~~~s 263 (365)
T 1jof_A 191 ---PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG----IPDRDPETGKGLYRADVCALT 263 (365)
T ss_dssp ---TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT----CCCBCTTTSSBSEEEEEEEEC
T ss_pred ---CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC----cCCcccccccccccccEEEEC
Confidence 0045889999999987766555688999998753 3221 111110000 012222 588999 99
Q ss_pred ecCCCCcCCCCCccceEEEec-CC-----eEEEEecC-CCcccc----cc-cccccceeeecCC--CCCeeEEccC-Cce
Q 019258 272 CHTKSSNISSSRVLPAMFCSE-DG-----ILAVVEQG-EEPFEL----LA-EPCAINSFDIDPQ--NPSDVICSLE-WES 336 (343)
Q Consensus 272 p~~~~~~~~~~~~~~l~s~s~-dg-----~i~~~~~~-~~~~~~----~~-~~~~i~s~~~~~~--~~~~l~~~~~-~~~ 336 (343)
|++. +|+++.. ++ +|.+|+.. ...... .. ......+++++|. +|++|++++. ++.
T Consensus 264 pdG~----------~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~ 333 (365)
T 1jof_A 264 FSGK----------YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGW 333 (365)
T ss_dssp TTSS----------EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCE
T ss_pred CCCC----------EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCe
Confidence 9987 4555543 23 89999864 222221 21 2345778899984 4688888775 488
Q ss_pred EEEEe
Q 019258 337 IAIVS 341 (343)
Q Consensus 337 i~~~~ 341 (343)
|.+|+
T Consensus 334 v~v~~ 338 (365)
T 1jof_A 334 LEIYR 338 (365)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99886
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.57 E-value=1.6e-12 Score=116.41 Aligned_cols=257 Identities=12% Similarity=-0.023 Sum_probs=153.3
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCe--EEEEc------
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSL--VAAST------ 89 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~--l~~~s------ 89 (343)
..+..++|+| ++++|++++.+ .+.+|++........+......+.+..++|+ +++. ++++.
T Consensus 40 ~~~~~~a~sp----dg~~l~~~~~~------~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~ 109 (365)
T 1jof_A 40 EPISWMTFDH----ERKNIYGAAMK------KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAV 109 (365)
T ss_dssp CCCSEEEECT----TSSEEEEEEBT------EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCE
T ss_pred CCCcEEEECC----CCCEEEEEccc------eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCccee
Confidence 4688899999 88888888876 3779998411111111111112446678888 6663 44443
Q ss_pred -------CCCcEEEEEccC-ceeeeeec-cCCccccCeEEEEec--CCEEEEEe-CCCcEEEEECC-CCceE-EEEEcC-
Q 019258 90 -------LSGSLHVLSSAM-QVLLSVDE-NSGFHVGPISGVDLT--GSECVSVG-EDGRVNLVSVI-GGGEF-KRVYDG- 154 (343)
Q Consensus 90 -------~dg~v~v~~~~~-~~~~~~~~-~~~~h~~~v~~~~~~--~~~~~s~s-~dg~v~~wd~~-~~~~~-~~~~~~- 154 (343)
.+|.+.+|++.. ++...... ....+...+.++.|+ ++.++++. .++.|.+||+. +++.. ......
T Consensus 110 ~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T 1jof_A 110 YANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp EEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred ccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC
Confidence 689999999973 33221111 111244578899998 77777665 46899999998 66421 122221
Q ss_pred -CCccceEEEEeCC-CCEEEEEeC-CCcEEEEEccccCCCCCe---eEEecccCCCCCccc------CeEEEE-EcCCCC
Q 019258 155 -NGLVGFNCVKWAS-PTEFVTGGF-GYGLQWWDLRRAGSGGPV---LQFKGNFGSQGKASG------MIHSVD-IHPSRK 221 (343)
Q Consensus 155 -~~~~~v~~~~~~~-~~~l~t~~~-d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~------~i~~v~-~~p~~~ 221 (343)
+.. .+..++|+| ++.+++++. +++|.+|++... .++.. ..+.........+.. .+..++ |+|+++
T Consensus 190 ~~g~-~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 190 DPGD-HPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK 267 (365)
T ss_dssp STTC-CEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS
T ss_pred CCCC-CCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC
Confidence 123 689999999 666766664 789999987530 12221 122211100000001 488999 999998
Q ss_pred eEEEEEecCC-----cEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEee---cCCCCcCCCCCccceEEEec-
Q 019258 222 HTCLAGGSSG-----TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDC---HTKSSNISSSRVLPAMFCSE- 292 (343)
Q Consensus 222 ~~~~sg~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p---~~~~~~~~~~~~~~l~s~s~- 292 (343)
.++++...+. +|.+||+............ ...+......++|+| ++. +|++++.
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~-------~~~~~~~~~~~a~sp~~~dg~----------~l~v~~~~ 330 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFL-------SPTPTSGGHSNAVSPCPWSDE----------WMAITDDQ 330 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEE-------EECSSCCTTCCCEEECTTCTT----------EEEEECSS
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeee-------eecCCCCcccceecCCCcCCC----------EEEEEEcC
Confidence 7765544333 8999999632222221100 012334456789999 676 6777765
Q ss_pred CCeEEEEecCCC
Q 019258 293 DGILAVVEQGEE 304 (343)
Q Consensus 293 dg~i~~~~~~~~ 304 (343)
+++|.+|+...+
T Consensus 331 ~~~v~v~~~~~~ 342 (365)
T 1jof_A 331 EGWLEIYRWKDE 342 (365)
T ss_dssp SCEEEEEEEETT
T ss_pred CCeEEEEEEchh
Confidence 489999986543
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.56 E-value=1.1e-11 Score=106.72 Aligned_cols=237 Identities=11% Similarity=0.049 Sum_probs=155.8
Q ss_pred CCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeecc---CCccccCeEEEEe-c-CCEEEEEe-C-CCcEEEEE
Q 019258 70 PPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDEN---SGFHVGPISGVDL-T-GSECVSVG-E-DGRVNLVS 141 (343)
Q Consensus 70 ~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~---~~~h~~~v~~~~~-~-~~~~~s~s-~-dg~v~~wd 141 (343)
+-..+.++++. ++.++++...++.|.+|+... ..+..... ...|...+.++.+ . ...++.+. . ++.|.+||
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 33567889998 677778878899999999763 22222211 1234557889998 3 44444444 3 88999999
Q ss_pred CCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCC
Q 019258 142 VIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSR 220 (343)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~ 220 (343)
. +++ ....+.......+.++++.+ ++.+++...++.|.+||.. ++.+..+.... .. ..+..++++|++
T Consensus 107 ~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~~-~~----~~p~~i~~~~~g 175 (286)
T 1q7f_A 107 Q-YGQ-FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN----GNVLHKFGCSK-HL----EFPNGVVVNDKQ 175 (286)
T ss_dssp T-TSC-EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT----SCEEEEEECTT-TC----SSEEEEEECSSS
T ss_pred C-CCc-EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC----CCEEEEeCCCC-cc----CCcEEEEECCCC
Confidence 4 443 33444333222689999999 6666666778999999963 34444443211 01 458999999987
Q ss_pred CeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCC-eEEEE
Q 019258 221 KHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG-ILAVV 299 (343)
Q Consensus 221 ~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg-~i~~~ 299 (343)
. ++++...++.|++||... .....+.. .++......|+++|++. .+++...++ .|.+|
T Consensus 176 ~-l~v~~~~~~~i~~~~~~g-~~~~~~~~---------~g~~~~p~~i~~d~~G~----------l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 176 E-IFISDNRAHCVKVFNYEG-QYLRQIGG---------EGITNYPIGVGINSNGE----------ILIADNHNNFNLTIF 234 (286)
T ss_dssp E-EEEEEGGGTEEEEEETTC-CEEEEESC---------TTTSCSEEEEEECTTCC----------EEEEECSSSCEEEEE
T ss_pred C-EEEEECCCCEEEEEcCCC-CEEEEEcc---------CCccCCCcEEEECCCCC----------EEEEeCCCCEEEEEE
Confidence 5 777777899999999753 33223221 12335688999999876 566777775 99999
Q ss_pred ecCCCcccccccc---cccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 300 EQGEEPFELLAEP---CAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 300 ~~~~~~~~~~~~~---~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+........+... ..+.++++++ +|..+++ +.++.|++|+
T Consensus 235 ~~~g~~~~~~~~~~~~~~~~~i~~~~-~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 235 TQDGQLISALESKVKHAQCFDVALMD-DGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp CTTSCEEEEEEESSCCSCEEEEEEET-TTEEEEE-ETTTEEEEEE
T ss_pred CCCCCEEEEEcccCCCCcceeEEECC-CCcEEEE-CCCCeEEEEE
Confidence 9754433333222 2356899998 5566666 5678999986
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.54 E-value=1.2e-11 Score=109.07 Aligned_cols=245 Identities=13% Similarity=0.081 Sum_probs=161.4
Q ss_pred CCCeeEEEcc-CCCeEEEEcCC------------------------CcEEEEEccCceeeeeeccCCccccCeEEEEec-
Q 019258 71 PTRISSLSTS-HQSLVAASTLS------------------------GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT- 124 (343)
Q Consensus 71 ~~~v~~v~~~-~~~~l~~~s~d------------------------g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~- 124 (343)
-+.+.+++++ +++++++...+ +.|.+||..+.+.+.... ..+......++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG--KNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC--TTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC--CCccCCceEEEECC
Confidence 3679999999 77778777777 479999886554332221 2344567889988
Q ss_pred -CCEEEEEeCCCcEEEEECCCCceEEEEEc--------CCCccceEEEEeCC--CCEEEEEe-CCCcEEEEEccccCCCC
Q 019258 125 -GSECVSVGEDGRVNLVSVIGGGEFKRVYD--------GNGLVGFNCVKWAS--PTEFVTGG-FGYGLQWWDLRRAGSGG 192 (343)
Q Consensus 125 -~~~~~s~s~dg~v~~wd~~~~~~~~~~~~--------~~~~~~v~~~~~~~--~~~l~t~~-~d~~i~iwd~~~~~~~~ 192 (343)
++.+++...++.|++||..........+. .........+++++ +..+++.+ .++.|++||. . +.
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~---g~ 176 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-S---GK 176 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-T---SC
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-C---CC
Confidence 77888888899999999865421223222 11122588999998 44555554 5999999994 3 45
Q ss_pred CeeEEecccCCC---CCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEE
Q 019258 193 PVLQFKGNFGSQ---GKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQ 269 (343)
Q Consensus 193 ~~~~~~~~~~~~---~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 269 (343)
.+..+....... ..+-.....++++|++..++++...+++|++||..+++....+.. ..+...+..++
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~---------~~~~~~~~~~~ 247 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH---------ASFGRNVFAIS 247 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC---------TTTTTCEEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec---------cccCCCcceee
Confidence 555543221000 001134889999998667888888999999999986554444321 23556788999
Q ss_pred Eee------cCCCCcCCCCCccceEEEecCCeEEEEecCC-Ccccccc----cccccceeeecCCCCCeeEEccCCceEE
Q 019258 270 YDC------HTKSSNISSSRVLPAMFCSEDGILAVVEQGE-EPFELLA----EPCAINSFDIDPQNPSDVICSLEWESIA 338 (343)
Q Consensus 270 ~~p------~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~-~~~~~~~----~~~~i~s~~~~~~~~~~l~~~~~~~~i~ 338 (343)
|+| ++. ..++.+.+++|++|+... +....+. ......++++++ +|..+++...++.|+
T Consensus 248 ~~pg~~~~~~g~----------~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~-dG~lyvad~~~~~I~ 316 (329)
T 3fvz_A 248 YIPGFLFAVNGK----------PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE-DGTVYIGDAHTNTVW 316 (329)
T ss_dssp EETTEEEEEECC----------CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT-TSEEEEEESSSCCEE
T ss_pred ecCCEEEEeCCC----------EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC-CCCEEEEECCCCEEE
Confidence 998 222 223334556899998543 2333321 224578999998 567888888888999
Q ss_pred EEe
Q 019258 339 IVS 341 (343)
Q Consensus 339 ~~~ 341 (343)
+|+
T Consensus 317 ~~~ 319 (329)
T 3fvz_A 317 KFT 319 (329)
T ss_dssp EEE
T ss_pred EEe
Confidence 886
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.53 E-value=6e-13 Score=129.82 Aligned_cols=276 Identities=9% Similarity=-0.027 Sum_probs=163.8
Q ss_pred eeeEEecCCCCCCCCeEEEEeecCCC----CCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEE
Q 019258 21 IDAVRWLPPLSPLSKLAVLAIYDTDA----DSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLH 95 (343)
Q Consensus 21 i~~v~w~p~~~~~~~~l~t~s~D~~~----~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~ 95 (343)
|..++|+| ++++|+.++..... ..-.|++|++.+... +........+..++|+ +++.|+.+. ++.|+
T Consensus 62 ~~~~~~Sp----Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~---~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~ 133 (719)
T 1z68_A 62 ASNYGLSP----DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF---VRGNELPRPIQYLCWSPVGSKLAYVY-QNNIY 133 (719)
T ss_dssp CSEEEECT----TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE---CCSSCCCSSBCCEEECSSTTCEEEEE-TTEEE
T ss_pred eeeEEECC----CCCeEEEEecCceeEEeecceEEEEEECCCCcc---ccceecCcccccceECCCCCEEEEEE-CCeEE
Confidence 88999999 89999988762100 001488999965322 1111223578999999 888888775 78999
Q ss_pred EEEccCceeeeeeccCCccccCe-----------------EEEEec--CCEEEEEeCCC---------------------
Q 019258 96 VLSSAMQVLLSVDENSGFHVGPI-----------------SGVDLT--GSECVSVGEDG--------------------- 135 (343)
Q Consensus 96 v~~~~~~~~~~~~~~~~~h~~~v-----------------~~~~~~--~~~~~s~s~dg--------------------- 135 (343)
+|++..++...+... ++...| .++.|+ |+.|++++.|.
T Consensus 134 ~~~~~~g~~~~l~~~--~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 134 LKQRPGDPPFQITFN--GRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EESSTTSCCEECCCC--CBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEeCCCCCcEEEecC--CCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 999975544433211 222222 478998 88999887652
Q ss_pred -------------cEEEEECCCCceE--EEEE-----cCCCccceEEEEeCCCC-EEEEEeCC----CcEEEEE----cc
Q 019258 136 -------------RVNLVSVIGGGEF--KRVY-----DGNGLVGFNCVKWASPT-EFVTGGFG----YGLQWWD----LR 186 (343)
Q Consensus 136 -------------~v~~wd~~~~~~~--~~~~-----~~~~~~~v~~~~~~~~~-~l~t~~~d----~~i~iwd----~~ 186 (343)
.|.+||+.+++.. ..+. ..+.. .+..++|+|.. .+++.... ..|.+|| +.
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~ 290 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY-YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQ 290 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE-EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSS
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc-eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCC
Confidence 7889999886421 1221 12333 68999999944 44443322 2488889 65
Q ss_pred ccCCCCCeeEE----ecccCCCCCcccCeE-----EEEEcCCCCeEEE-EEecCC--cEEEEEccCCceeeeeecCCCCc
Q 019258 187 RAGSGGPVLQF----KGNFGSQGKASGMIH-----SVDIHPSRKHTCL-AGGSSG--TVFAWDLRWQQQSIVLSGVGTGE 254 (343)
Q Consensus 187 ~~~~~~~~~~~----~~~~~~~~~~~~~i~-----~v~~~p~~~~~~~-sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~ 254 (343)
. ++....+ ..+. +.+. .+.|+|++..+++ +...+| .|.+||+.... ... +
T Consensus 291 ~---g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~-l------ 352 (719)
T 1z68_A 291 T---WDCPKTQEHIEESRT-------GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQ-I------ 352 (719)
T ss_dssp S---EECCGGGEEEEECSS-------SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEE-C------
T ss_pred C---CceEEEEecccccCC-------ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEe-c------
Confidence 5 3322222 1222 4454 7899999987655 344555 46777776543 222 2
Q ss_pred ccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecC-----CeEEEEecCC--C--cccccc-----cccccceeee
Q 019258 255 AVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSED-----GILAVVEQGE--E--PFELLA-----EPCAINSFDI 320 (343)
Q Consensus 255 ~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~d-----g~i~~~~~~~--~--~~~~~~-----~~~~i~s~~~ 320 (343)
..+...+..+.+. ++. .++..+.+ +...+|.... . ....+. +...+.++.+
T Consensus 353 ----t~~~~~v~~~~~~-d~~----------~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~ 417 (719)
T 1z68_A 353 ----TSGKWEAINIFRV-TQD----------SLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASF 417 (719)
T ss_dssp ----SCSSSCEEEEEEE-CSS----------EEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEE
T ss_pred ----ccCceEEEEEEEE-eCC----------EEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEE
Confidence 2345567788877 666 45555544 6677765432 1 112222 2345778888
Q ss_pred cCCCCCeeEE-ccCC--ceEEEEe
Q 019258 321 DPQNPSDVIC-SLEW--ESIAIVS 341 (343)
Q Consensus 321 ~~~~~~~l~~-~~~~--~~i~~~~ 341 (343)
+++ +++++. .+.. ..+++|+
T Consensus 418 s~d-g~~l~~~~s~~~~p~~~l~d 440 (719)
T 1z68_A 418 SDY-AKYYALVCYGPGIPISTLHD 440 (719)
T ss_dssp CGG-GSSEEEEECCBSSCEEEEEC
T ss_pred CCC-CCEEEEEcCCCCCCeEEEEE
Confidence 884 455553 3222 3455553
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.51 E-value=4.8e-11 Score=102.76 Aligned_cols=241 Identities=10% Similarity=0.022 Sum_probs=153.1
Q ss_pred ccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc----CCCCCCeeEEEcc--CCCeEEEEcC-
Q 019258 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ----WTPPTRISSLSTS--HQSLVAASTL- 90 (343)
Q Consensus 18 ~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~----~~~~~~v~~v~~~--~~~~l~~~s~- 90 (343)
-..+..|++.| +++++++.+.++ .|.+|+...... ..+.. ..+...+.++++. ++.++++...
T Consensus 29 ~~~p~~v~~~~----~g~l~v~~~~~~-----~i~~~d~~g~~~-~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~ 98 (286)
T 1q7f_A 29 FTEPSGVAVNA----QNDIIVADTNNH-----RIQIFDKEGRFK-FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP 98 (286)
T ss_dssp BSCEEEEEECT----TCCEEEEEGGGT-----EEEEECTTSCEE-EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG
T ss_pred cCCCceEEECC----CCCEEEEECCCC-----EEEEECCCCcEE-EEecccCCCcccccCceEEEEEcCCCeEEEEcCCC
Confidence 35688999998 778888877664 377888743211 00100 1223467899994 4444444433
Q ss_pred CCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-
Q 019258 91 SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS- 167 (343)
Q Consensus 91 dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~- 167 (343)
++.|.+|+.. .+.+.... ..+...+.++.+. +..+++...++.|.+||.... .............+.++++++
T Consensus 99 ~~~i~~~d~~-g~~~~~~~--~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 99 THQIQIYNQY-GQFVRKFG--ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLHKFGCSKHLEFPNGVVVNDK 174 (286)
T ss_dssp GCEEEEECTT-SCEEEEEC--TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEEEEECTTTCSSEEEEEECSS
T ss_pred CCEEEEECCC-CcEEEEec--CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-EEEEeCCCCccCCcEEEEECCC
Confidence 8899999844 33332221 1244567889887 777777778899999997543 333332212222589999999
Q ss_pred CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC-cEEEEEccCCceeee
Q 019258 168 PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG-TVFAWDLRWQQQSIV 246 (343)
Q Consensus 168 ~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg-~v~iwd~~~~~~~~~ 246 (343)
++.+++...++.|++||... +.+..+.... .. .....++++|++ .++++...++ .|.+||.. ++....
T Consensus 175 g~l~v~~~~~~~i~~~~~~g----~~~~~~~~~g-~~----~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~-g~~~~~ 243 (286)
T 1q7f_A 175 QEIFISDNRAHCVKVFNYEG----QYLRQIGGEG-IT----NYPIGVGINSNG-EILIADNHNNFNLTIFTQD-GQLISA 243 (286)
T ss_dssp SEEEEEEGGGTEEEEEETTC----CEEEEESCTT-TS----CSEEEEEECTTC-CEEEEECSSSCEEEEECTT-SCEEEE
T ss_pred CCEEEEECCCCEEEEEcCCC----CEEEEEccCC-cc----CCCcEEEECCCC-CEEEEeCCCCEEEEEECCC-CCEEEE
Confidence 55666666799999999733 4444443221 01 458899999988 4667777775 99999964 333333
Q ss_pred eecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 247 LSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 247 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
+.. ......+.+++++|++. .+++ +.|++|++|+...
T Consensus 244 ~~~---------~~~~~~~~~i~~~~~g~----------l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 244 LES---------KVKHAQCFDVALMDDGS----------VVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEE---------SSCCSCEEEEEEETTTE----------EEEE-ETTTEEEEEECSC
T ss_pred Ecc---------cCCCCcceeEEECCCCc----------EEEE-CCCCeEEEEEccc
Confidence 321 11223478999999875 4455 6799999998743
No 167
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.50 E-value=2e-11 Score=107.58 Aligned_cols=272 Identities=11% Similarity=0.052 Sum_probs=163.1
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEE
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVL 97 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~ 97 (343)
..|.++.|+| +...++..+.++. ++.|.- ... .....+...+.++.|+ ++.+++++..++.|.+|
T Consensus 6 ~~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~---~~~--~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~ 71 (333)
T 2dg1_A 6 QDLPTLFYSG----KSNSAVPIISESE-----LQTITA---EPW--LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKI 71 (333)
T ss_dssp CCCCBCCSCG----GGGCSSCCCCGGG-----SCEEEC---EEE--EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEE
T ss_pred cccceeeecC----CccceeEEeeccc-----Cccccc---cee--EEEeccCccccCcEECCCCCEEEEECCCCEEEEE
Confidence 3577888888 4444444444543 446622 111 1112344567899998 77777788889999999
Q ss_pred EccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCC----CcEEEEECCCCceEEEEEc-CCCccceEEEEeCC-CC
Q 019258 98 SSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGED----GRVNLVSVIGGGEFKRVYD-GNGLVGFNCVKWAS-PT 169 (343)
Q Consensus 98 ~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~d----g~v~~wd~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~ 169 (343)
+....+...... .+...+.++.++ +..+++...+ +.|.+||..++. ...... ......+.++.+.+ +.
T Consensus 72 d~~~~~~~~~~~---~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 72 NPETKEIKRPFV---SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN-LQDIIEDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp CTTTCCEEEEEE---CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS-CEEEECSSSSCCCEEEEEECTTSC
T ss_pred eCCCCcEEEEee---CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE-EEEEEccCccCCcccceEECCCCC
Confidence 987544332221 244678999998 6666766666 689999998764 333332 11222689999999 55
Q ss_pred EEEEEeC------CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCC-c
Q 019258 170 EFVTGGF------GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQ-Q 242 (343)
Q Consensus 170 ~l~t~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~-~ 242 (343)
.+++... .+.|..+|... ..+..+.... .....++++|++..++++.+.++.|.+||++.. .
T Consensus 148 l~v~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~-------~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~ 216 (333)
T 2dg1_A 148 FYFTDFRGYSTNPLGGVYYVSPDF----RTVTPIIQNI-------SVANGIALSTDEKVLWVTETTANRLHRIALEDDGV 216 (333)
T ss_dssp EEEEECCCBTTBCCEEEEEECTTS----CCEEEEEEEE-------SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSS
T ss_pred EEEEeccccccCCCceEEEEeCCC----CEEEEeecCC-------CcccceEECCCCCEEEEEeCCCCeEEEEEecCCCc
Confidence 5554443 24455555433 2333333221 457899999998777777777899999998642 2
Q ss_pred eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccccccccc-------cc
Q 019258 243 QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAEPC-------AI 315 (343)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~-------~i 315 (343)
....+.. ........+ ..+..+++++++. ..++...++.|++|+...+....+..+. .+
T Consensus 217 ~~~~~~~---~~~~~~~~~-~~~~~i~~d~~G~----------l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~ 282 (333)
T 2dg1_A 217 TIQPFGA---TIPYYFTGH-EGPDSCCIDSDDN----------LYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRS 282 (333)
T ss_dssp SEEEEEE---EEEEECCSS-SEEEEEEEBTTCC----------EEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBC
T ss_pred Ccccccc---eEEEecCCC-CCCCceEECCCCC----------EEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCc
Confidence 1111000 000000112 4678899998876 4566667899999987544333333222 57
Q ss_pred ceeeecCCCCCeeEEccCC
Q 019258 316 NSFDIDPQNPSDVICSLEW 334 (343)
Q Consensus 316 ~s~~~~~~~~~~l~~~~~~ 334 (343)
.++.+++ ++..|..++.+
T Consensus 283 ~~~~~~~-dg~~L~v~~~~ 300 (333)
T 2dg1_A 283 THPQFIP-GTNQLIICSND 300 (333)
T ss_dssp CEEEECT-TSCEEEEEEEC
T ss_pred ceEEECC-CCCEEEEEeCc
Confidence 8999987 45566544433
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.46 E-value=3.5e-11 Score=108.17 Aligned_cols=272 Identities=8% Similarity=-0.097 Sum_probs=158.4
Q ss_pred eeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCC-eeEEEcc-CCCeEEEEcCCCcEEEEE
Q 019258 21 IDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTR-ISSLSTS-HQSLVAASTLSGSLHVLS 98 (343)
Q Consensus 21 i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~-v~~v~~~-~~~~l~~~s~dg~v~v~~ 98 (343)
+..++|+| ++++|+..+.+. +...|++|++..... ......... ...+.|+ +++.|+.++.++.|++|+
T Consensus 38 ~~~~~~Sp----dG~~l~~~~~~~--g~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d 108 (396)
T 3c5m_A 38 FYQKCFTQ----DGKKLLFAGDFD--GNRNYYLLNLETQQA---VQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVD 108 (396)
T ss_dssp TTSCCBCT----TSCEEEEEECTT--SSCEEEEEETTTTEE---EECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEE
T ss_pred eecCcCCC----CCCEEEEEEecC--CCceEEEEECCCCcE---EEeecCCCCccccceECCCCCEEEEEEcCCcEEEEE
Confidence 77889999 888887765542 223578888855321 111222233 3347788 888998998988999999
Q ss_pred ccCceeeeeeccCCccccCeE---EEE----------------ec--CCEEEEE-----eCCCcEEEEECCCCceEEEEE
Q 019258 99 SAMQVLLSVDENSGFHVGPIS---GVD----------------LT--GSECVSV-----GEDGRVNLVSVIGGGEFKRVY 152 (343)
Q Consensus 99 ~~~~~~~~~~~~~~~h~~~v~---~~~----------------~~--~~~~~s~-----s~dg~v~~wd~~~~~~~~~~~ 152 (343)
+...+...+... +.+... .+. ++ ++.++.. ..+..|.+||+.+++ ...+.
T Consensus 109 ~~~~~~~~~~~~---~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~-~~~~~ 184 (396)
T 3c5m_A 109 LETLEEQVIYTV---DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE-LEVIH 184 (396)
T ss_dssp TTTCCEEEEEEC---CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC-EEEEE
T ss_pred CCCCCcEEEEec---ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc-EEeec
Confidence 875544333321 111111 111 12 2222222 356689999998874 44444
Q ss_pred cCCCccceEEEEeCC--CCEEEEEeCC------CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEE
Q 019258 153 DGNGLVGFNCVKWAS--PTEFVTGGFG------YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTC 224 (343)
Q Consensus 153 ~~~~~~~v~~~~~~~--~~~l~t~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~ 224 (343)
.... .+..+.|+| +..++..+.+ ..|.+||+.. + ....+..... . ..+..++|+|++..++
T Consensus 185 ~~~~--~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~---~-~~~~l~~~~~-~----~~~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 185 QDTA--WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG---S-NVRKIKEHAE-G----ESCTHEFWIPDGSAMA 253 (396)
T ss_dssp EESS--CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS---C-CCEESSCCCT-T----EEEEEEEECTTSSCEE
T ss_pred cCCc--ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC---C-ceeEeeccCC-C----ccccceEECCCCCEEE
Confidence 3333 588999998 4456665543 4688888755 2 2333322110 0 3488899999998766
Q ss_pred EEEecC----CcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEee-cCCCCcCCCCCccceEEEe--------
Q 019258 225 LAGGSS----GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDC-HTKSSNISSSRVLPAMFCS-------- 291 (343)
Q Consensus 225 ~sg~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~~~~~~~~~~l~s~s-------- 291 (343)
+++..+ +.|++||+.+++.. .+. . .. ... +.|+| ++. .+++++
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~-~l~----------~-~~-~~~-~~~s~~dg~----------~l~~~~~~~p~~~~ 309 (396)
T 3c5m_A 254 YVSYFKGQTDRVIYKANPETLENE-EVM----------V-MP-PCS-HLMSNFDGS----------LMVGDGCDAPVDVA 309 (396)
T ss_dssp EEEEETTTCCEEEEEECTTTCCEE-EEE----------E-CC-SEE-EEEECSSSS----------EEEEEECCC-----
T ss_pred EEecCCCCccceEEEEECCCCCeE-Eee----------e-CC-CCC-CCccCCCCc----------eEEEecCCcceeec
Confidence 554432 34999999875432 222 0 11 122 88999 876 455543
Q ss_pred --------cCCeEEEEecCCCccccccc-cc-----------ccceeeecCCCCCeeEEccC-Cc--eEEEEe
Q 019258 292 --------EDGILAVVEQGEEPFELLAE-PC-----------AINSFDIDPQNPSDVICSLE-WE--SIAIVS 341 (343)
Q Consensus 292 --------~dg~i~~~~~~~~~~~~~~~-~~-----------~i~s~~~~~~~~~~l~~~~~-~~--~i~~~~ 341 (343)
.++.|++|+........+.. .. .+.++.++| +|+.|+.+++ ++ .|+.++
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 310 DADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTP-NDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp -----CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECT-TSSEEEEEECTTSSCEEEEEE
T ss_pred cccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEcc-CCCeEEEEecCCCCceEEEEE
Confidence 34689999975433333332 22 256778898 5677766654 34 344443
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.45 E-value=1.5e-11 Score=120.36 Aligned_cols=249 Identities=10% Similarity=0.005 Sum_probs=147.4
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccC---CCCCCeeEEEcc-CCCeEEEEcCC----
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQW---TPPTRISSLSTS-HQSLVAASTLS---- 91 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~---~~~~~v~~v~~~-~~~~l~~~s~d---- 91 (343)
+...++|+| ++.+++++ |+ .|++|++.......++... .......++.|+ +++.|+.++.+
T Consensus 18 ~~~~~~w~~----dg~~~~~~--~~-----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 18 KLYSLRWIS----DHEYLYKQ--EN-----NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW 86 (740)
T ss_dssp CCCCEEECS----SSEEEEEE--TT-----EEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS
T ss_pred cccccEECC----CCcEEEEc--CC-----cEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE
Confidence 466899999 78888876 64 3789999654322111111 111233457889 88888888875
Q ss_pred -----CcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEc-CCCc------
Q 019258 92 -----GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYD-GNGL------ 157 (343)
Q Consensus 92 -----g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~-~~~~------ 157 (343)
+.+.+||+..++...+ ..|.+.+....|+ |+.++.+. |+.|.+||+.++. ..++.. ++..
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l----~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~-~~~lt~~g~~~~~~~g~ 160 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITE----ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLP-SYRITWTGKEDIIYNGI 160 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCS----SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSC-CEECCSCCBTTTEEESB
T ss_pred EEccceEEEEEECCCCcEEEc----ccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCc-eEEEcCCCCccceecCc
Confidence 5677999986653322 2466789999999 88888874 6789999998874 444322 2211
Q ss_pred ----------cceEEEEeCC-CCEEEEEeCCC------------------------------------cEEEEEccccCC
Q 019258 158 ----------VGFNCVKWAS-PTEFVTGGFGY------------------------------------GLQWWDLRRAGS 190 (343)
Q Consensus 158 ----------~~v~~~~~~~-~~~l~t~~~d~------------------------------------~i~iwd~~~~~~ 190 (343)
.....+.|+| +..|+.++.|. +|++||+.....
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~ 240 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSS 240 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCS
T ss_pred ccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCC
Confidence 0123588999 77788776433 355555532000
Q ss_pred CC--CeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe---cCCcEEEEEccCCc----e--eeeeecCCCCcccccC
Q 019258 191 GG--PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG---SSGTVFAWDLRWQQ----Q--SIVLSGVGTGEAVTHS 259 (343)
Q Consensus 191 ~~--~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~---~dg~v~iwd~~~~~----~--~~~~~~~~~~~~~~~~ 259 (343)
++ ....+..... ...+...+..++|+|++..++.... .+..|.+||+.+++ . ...+.. .
T Consensus 241 ~~~~~~~~l~~~~~-~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~---------~ 310 (740)
T 4a5s_A 241 VTNATSIQITAPAS-MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE---------M 310 (740)
T ss_dssp SSCCCEEEECCCHH-HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE---------E
T ss_pred CCcceEEEecCCcc-CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee---------c
Confidence 10 1222221000 0001156899999999874443322 23469999998765 1 111110 2
Q ss_pred CccccEE-----EEEEeecCCCCcCCCCCccceE-EEec-CC--eEEEEecCCCc
Q 019258 260 LSESEVW-----EVQYDCHTKSSNISSSRVLPAM-FCSE-DG--ILAVVEQGEEP 305 (343)
Q Consensus 260 ~h~~~v~-----~v~~~p~~~~~~~~~~~~~~l~-s~s~-dg--~i~~~~~~~~~ 305 (343)
.|...|. .+.|+|++. .++ ..|+ +| .|++|+.....
T Consensus 311 ~~~~~v~~~~~~~p~fspDG~----------~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 311 STTGWVGRFRPSEPHFTLDGN----------SFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp CSSSCSSSSSCCCCEECTTSS----------EEEEEEECTTSCEEEEEEETTCSS
T ss_pred cCCceEccCcCCCceEcCCCC----------EEEEEEEcCCCceEEEEEECCCCc
Confidence 3444444 788999987 444 5654 44 57888875433
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.41 E-value=3e-11 Score=116.64 Aligned_cols=280 Identities=10% Similarity=-0.021 Sum_probs=160.6
Q ss_pred cccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCee---------EEEcc---CCCe
Q 019258 17 QSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRIS---------SLSTS---HQSL 84 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~---------~v~~~---~~~~ 84 (343)
|...|..++|++ +.-++++...+.. + ...||........ .....+...+. ...|+ +++.
T Consensus 22 ~~~~~~~~~~s~----~~~~~~~~~~~~~-~--~~~l~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 22 RSGRPACVGAVG----DEVWWVAPRPAEA-G--RATLVRRRADGAE--ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp TCSCCEEEEEET----TEEEEEEEETTTT-T--EEEEEEECTTSCE--EESSCTTCCBCCCGGGTCCCCEEEECCSSSSC
T ss_pred cCCccceeEEcC----CeEEEEecCcccC-C--cEEEEEECCCCCc--ceeCCCCccccccccccCCccceeeeecCCCe
Confidence 567899999998 5555555521211 2 2446664222211 12223333444 44443 4666
Q ss_pred -EEEEcC-CCcEEEEEcc--C-ceeeeeecc-CCccccCeEEEEec--CCEEEEEeCC----------CcEEEEECCC--
Q 019258 85 -VAASTL-SGSLHVLSSA--M-QVLLSVDEN-SGFHVGPISGVDLT--GSECVSVGED----------GRVNLVSVIG-- 144 (343)
Q Consensus 85 -l~~~s~-dg~v~v~~~~--~-~~~~~~~~~-~~~h~~~v~~~~~~--~~~~~s~s~d----------g~v~~wd~~~-- 144 (343)
|+.++. +..|.++++. . .+...+... ...|...+.++.|+ ++.|++++.| ..|.+||+.+
T Consensus 93 ~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 93 LLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp EEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred EEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence 555543 5566666654 2 332222211 00156678899998 8889988877 5899999987
Q ss_pred ----CceEEEEE-cCCCccceEEEEeCC-CCEEEEEeCC--------CcEEEEEccccCCCC--CeeEEecccCCCCCcc
Q 019258 145 ----GGEFKRVY-DGNGLVGFNCVKWAS-PTEFVTGGFG--------YGLQWWDLRRAGSGG--PVLQFKGNFGSQGKAS 208 (343)
Q Consensus 145 ----~~~~~~~~-~~~~~~~v~~~~~~~-~~~l~t~~~d--------~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~ 208 (343)
+ ....+. ..+. .+..++|+| +..|+.++.+ ..|.+||+.. .+. ....+.... .
T Consensus 173 ~~~~~-~~~~l~~~~~~--~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~--~g~~~~~~~l~~~~--~---- 241 (662)
T 3azo_A 173 AADRS-AVRELSDDAHR--FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE--DGRFADTRTLLGGP--E---- 241 (662)
T ss_dssp TTCGG-GSEESSCSCSS--EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT--TSCEEEEEEEEEET--T----
T ss_pred cccCC-ceeEEEecCCC--cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC--CCcccccEEeCCCC--C----
Confidence 5 345444 3333 578889999 7778777755 3799999973 131 333443221 1
Q ss_pred cCeEEEEEcCCCCeEEEEEecCC--cEEEEEccCCceeeeeecCCCCcccccCCcccc--------EEEEEEeecCCCCc
Q 019258 209 GMIHSVDIHPSRKHTCLAGGSSG--TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESE--------VWEVQYDCHTKSSN 278 (343)
Q Consensus 209 ~~i~~v~~~p~~~~~~~sg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~--------v~~v~~~p~~~~~~ 278 (343)
..+..+.|+|++. +++++..+| .|.+||+..++ ...+. ..+... +..++|+|++.
T Consensus 242 ~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~-~~~l~----------~~~~~~~~p~w~~~~~~~~~~~~~~--- 306 (662)
T 3azo_A 242 EAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA-ATQLC----------RREEEFAGPLWTPGMRWFAPLANGL--- 306 (662)
T ss_dssp BCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC-EEESS----------CCSSBSSCCCCSTTCCSEEECTTSC---
T ss_pred ceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc-eeecc----------cccccccCccccccCceEeEeCCCE---
Confidence 5689999999998 777888888 56666664432 22222 111111 45788888766
Q ss_pred CCCCCccceEEEecCCeEEEE--ecCC-Cccccccccccccee-eecCCCCCeeEEccCCc--eEEEE
Q 019258 279 ISSSRVLPAMFCSEDGILAVV--EQGE-EPFELLAEPCAINSF-DIDPQNPSDVICSLEWE--SIAIV 340 (343)
Q Consensus 279 ~~~~~~~~l~s~s~dg~i~~~--~~~~-~~~~~~~~~~~i~s~-~~~~~~~~~l~~~~~~~--~i~~~ 340 (343)
.+++++. +.+.+| +... ....+......+.++ +.++ +.-.+++++.+. .|+.+
T Consensus 307 -------~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 307 -------IAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSG-TRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp -------EEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEET-TEEEEEEEETTEEEEEEEE
T ss_pred -------EEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCC-CEEEEEEcCCCCCCEEEEE
Confidence 6777777 887777 5432 232332233456666 6665 223334444443 44444
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.41 E-value=6.1e-11 Score=116.12 Aligned_cols=243 Identities=7% Similarity=0.003 Sum_probs=143.1
Q ss_pred CCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCC--ccccCeEEEEec--CCEEEEEeCC---------CcE
Q 019258 72 TRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSG--FHVGPISGVDLT--GSECVSVGED---------GRV 137 (343)
Q Consensus 72 ~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~--~h~~~v~~~~~~--~~~~~s~s~d---------g~v 137 (343)
....++.|+ ++.+++++ ||.|++|++.+++...+..... .+.....++.|+ ++.++.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 456789999 66666665 9999999998666554433211 111223446777 8888888876 556
Q ss_pred EEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCC----cc----
Q 019258 138 NLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGK----AS---- 208 (343)
Q Consensus 138 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~---- 208 (343)
.+||+.+++ ...+. .+.. .+...+|+| ++.|+.+ .++.|.+||+.. +.. .++.... .... ..
T Consensus 95 ~~~d~~~~~-~~~l~-~~~~-~~~~~~~SPdG~~la~~-~~~~i~~~~~~~---~~~-~~lt~~g-~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 95 DIYDLNKRQ-LITEE-RIPN-NTQWVTWSPVGHKLAYV-WNNDIYVKIEPN---LPS-YRITWTG-KEDIIYNGITDWVY 165 (740)
T ss_dssp EEEETTTTE-ECCSS-CCCT-TEEEEEECSSTTCEEEE-ETTEEEEESSTT---SCC-EECCSCC-BTTTEEESBCCHHH
T ss_pred EEEECCCCc-EEEcc-cCCC-cceeeEECCCCCEEEEE-ECCeEEEEECCC---Cce-EEEcCCC-CccceecCcccccc
Confidence 799999984 44433 3333 699999999 7777766 578999999977 332 2322111 0000 00
Q ss_pred -----cCeEEEEEcCCCCeEEEEEecCC-----------------------------------cEEEEEccC---Cc--e
Q 019258 209 -----GMIHSVDIHPSRKHTCLAGGSSG-----------------------------------TVFAWDLRW---QQ--Q 243 (343)
Q Consensus 209 -----~~i~~v~~~p~~~~~~~sg~~dg-----------------------------------~v~iwd~~~---~~--~ 243 (343)
+....+.|+|+|..++.....++ +|++||+.. +. .
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce
Confidence 11235899999987654433333 356666655 32 1
Q ss_pred eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEec----CCeEEEEecCCCc--------cccccc
Q 019258 244 SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSE----DGILAVVEQGEEP--------FELLAE 311 (343)
Q Consensus 244 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~----dg~i~~~~~~~~~--------~~~~~~ 311 (343)
...+.. . .....|...+..++|+|++. .++.... +..|++|+..... ..+..+
T Consensus 246 ~~~l~~-~----~~~~~~~~~~~~~~wspdg~----------~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~ 310 (740)
T 4a5s_A 246 SIQITA-P----ASMLIGDHYLCDVTWATQER----------ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEM 310 (740)
T ss_dssp EEEECC-C----HHHHTSCEEEEEEEEEETTE----------EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEE
T ss_pred EEEecC-C----ccCCCCCeEEEEEEEeCCCe----------EEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeec
Confidence 112210 0 00013677899999999986 3444432 3368889864322 222212
Q ss_pred --ccccc-----eeeecCCCCCeeE-EccC-C--ceEEEEe
Q 019258 312 --PCAIN-----SFDIDPQNPSDVI-CSLE-W--ESIAIVS 341 (343)
Q Consensus 312 --~~~i~-----s~~~~~~~~~~l~-~~~~-~--~~i~~~~ 341 (343)
...+. +..|+| +|+.++ ..++ + ..|++++
T Consensus 311 ~~~~~v~~~~~~~p~fsp-DG~~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 311 STTGWVGRFRPSEPHFTL-DGNSFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp CSSSCSSSSSCCCCEECT-TSSEEEEEEECTTSCEEEEEEE
T ss_pred cCCceEccCcCCCceEcC-CCCEEEEEEEcCCCceEEEEEE
Confidence 23333 788998 567665 5543 3 3566654
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.38 E-value=2e-09 Score=94.80 Aligned_cols=248 Identities=10% Similarity=-0.029 Sum_probs=161.6
Q ss_pred ccceeeEEecCCCCCCCCeEEEEeecCCCC-------------------CCceeeeeCCCCCCCCCCccC--CCCCCeeE
Q 019258 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTDAD-------------------SPSLETHSISLPASLTPHSQW--TPPTRISS 76 (343)
Q Consensus 18 ~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~-------------------~~~l~~w~~~~~~~~~~~~~~--~~~~~v~~ 76 (343)
-..|..|++.| +++++++.+.++... .-.|.+|+..... ....+ .+-.....
T Consensus 23 l~~v~~va~d~----~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 23 PGQVSGVALDS----KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE---ILQSSGKNLFYLPHG 95 (329)
T ss_dssp CSCEEEEEECT----TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC---EEEEECTTTCSSEEE
T ss_pred cCCceEEEECC----CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe---EEeccCCCccCCceE
Confidence 35699999999 788998887663211 0136677764322 12222 22346789
Q ss_pred EEcc-CCCeEEEEcCCCcEEEEEccCce-eeeeecc------CCccccCeEEEEec---CCEEEEEe-CCCcEEEEECCC
Q 019258 77 LSTS-HQSLVAASTLSGSLHVLSSAMQV-LLSVDEN------SGFHVGPISGVDLT---GSECVSVG-EDGRVNLVSVIG 144 (343)
Q Consensus 77 v~~~-~~~~l~~~s~dg~v~v~~~~~~~-~~~~~~~------~~~h~~~v~~~~~~---~~~~~s~s-~dg~v~~wd~~~ 144 (343)
+++. +++++++...++.|++|+..... .+..... ...+.....+++++ +..+++.+ .++.|++||..
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~- 174 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS- 174 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-
Confidence 9998 77888888889999999986331 2221110 01344467888887 56667765 68999999954
Q ss_pred CceEEEEEcCCC---------ccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEE
Q 019258 145 GGEFKRVYDGNG---------LVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213 (343)
Q Consensus 145 ~~~~~~~~~~~~---------~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 213 (343)
+. ....+.... ......+++++ +..+++...++.|++||... ++.+..+.... ....+..
T Consensus 175 g~-~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~---G~~~~~~~~~~-----~~~~~~~ 245 (329)
T 3fvz_A 175 GK-FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT---KEFVREIKHAS-----FGRNVFA 245 (329)
T ss_dssp SC-EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT---CCEEEEECCTT-----TTTCEEE
T ss_pred CC-EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC---CcEEEEEeccc-----cCCCcce
Confidence 43 333332111 12378999988 34556666699999999976 66666664321 1155889
Q ss_pred EEEcCCCCeEEEEE-------ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccc
Q 019258 214 VDIHPSRKHTCLAG-------GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLP 286 (343)
Q Consensus 214 v~~~p~~~~~~~sg-------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~ 286 (343)
++++| + .++.+. ..+.+|++||+.+++....+. .. ..+......|+++|++. .
T Consensus 246 ~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~-~~-------~~~~~~p~~ia~~~dG~----------l 305 (329)
T 3fvz_A 246 ISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFK-PV-------RKHFDMPHDIVASEDGT----------V 305 (329)
T ss_dssp EEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEEC-CS-------SSCCSSEEEEEECTTSE----------E
T ss_pred eeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEc-CC-------CCccCCeeEEEECCCCC----------E
Confidence 99999 3 233332 345589999998765443331 11 24566789999999985 7
Q ss_pred eEEEecCCeEEEEecC
Q 019258 287 AMFCSEDGILAVVEQG 302 (343)
Q Consensus 287 l~s~s~dg~i~~~~~~ 302 (343)
+++.+.+++|+.|+..
T Consensus 306 yvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 306 YIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEESSSCCEEEEEEE
T ss_pred EEEECCCCEEEEEeCC
Confidence 8888999999999864
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.38 E-value=1e-10 Score=105.06 Aligned_cols=227 Identities=12% Similarity=-0.002 Sum_probs=137.0
Q ss_pred EEcc-CCCeEEEEcC-CCc--EEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEE
Q 019258 77 LSTS-HQSLVAASTL-SGS--LHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKR 150 (343)
Q Consensus 77 v~~~-~~~~l~~~s~-dg~--v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~ 150 (343)
.+|+ +++.|+.++. +|. |.+|++...+...+.. .|...+..+.|+ ++.|+.++.++.|.+||+.+++ ...
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~---~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~-~~~ 116 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE---GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE-ENV 116 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC---SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC-EEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee---CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc-cee
Confidence 7788 8888888877 674 7777776555443332 344444455677 8899999999999999999874 444
Q ss_pred EEcCCCccceEEEE--eCC-CCEEEEE----------------------eCCCcEEEEEccccCCCCCeeEEecccCCCC
Q 019258 151 VYDGNGLVGFNCVK--WAS-PTEFVTG----------------------GFGYGLQWWDLRRAGSGGPVLQFKGNFGSQG 205 (343)
Q Consensus 151 ~~~~~~~~~v~~~~--~~~-~~~l~t~----------------------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 205 (343)
+...+.. .+.... +++ +..++.. ..+..|.+||+.. ++ ...+....
T Consensus 117 ~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~---g~-~~~l~~~~---- 187 (388)
T 3pe7_A 117 VYQVPAE-WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT---GE-STVILQEN---- 187 (388)
T ss_dssp EEECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT---CC-EEEEEEES----
T ss_pred eeechhh-cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC---Cc-eEEeecCC----
Confidence 4444433 233333 366 4444432 2357899999987 43 44444332
Q ss_pred CcccCeEEEEEcC-CCCeEEEEEec-----CCcEEEEEccCCceeeeeecCCCCcccccCCcc-ccEEEEEEeecCCCCc
Q 019258 206 KASGMIHSVDIHP-SRKHTCLAGGS-----SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSE-SEVWEVQYDCHTKSSN 278 (343)
Q Consensus 206 ~~~~~i~~v~~~p-~~~~~~~sg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~~ 278 (343)
..+..++|+| ++..++.+... +..|.++|+... ....+. ..+. ..+..+.|+|++.
T Consensus 188 ---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~----------~~~~~~~~~~~~~spdg~--- 250 (388)
T 3pe7_A 188 ---QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT-NMRKVK----------THAEGESCTHEFWVPDGS--- 250 (388)
T ss_dssp ---SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC-CCEESC----------CCCTTEEEEEEEECTTSS---
T ss_pred ---ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC-ceEEee----------eCCCCcccccceECCCCC---
Confidence 5689999999 88765444332 337888887653 223322 1122 3578899999988
Q ss_pred CCCCCccceEEEec-CC----eEEEEecCCCccccccc-cc------ccceeeecCCCCCeeEEc---------cCCceE
Q 019258 279 ISSSRVLPAMFCSE-DG----ILAVVEQGEEPFELLAE-PC------AINSFDIDPQNPSDVICS---------LEWESI 337 (343)
Q Consensus 279 ~~~~~~~~l~s~s~-dg----~i~~~~~~~~~~~~~~~-~~------~i~s~~~~~~~~~~l~~~---------~~~~~i 337 (343)
.|+..+. ++ .|++|+........+.. +. ......|+| +|+.|+.. ..+..|
T Consensus 251 -------~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 251 -------ALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVG-DGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp -------CEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEE-EECCC------------CCCCEE
T ss_pred -------EEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEcc-CCCcceeEeeeccccccCCCCEE
Confidence 4544433 22 39999975443222222 11 133446787 45777654 335578
Q ss_pred EEEe
Q 019258 338 AIVS 341 (343)
Q Consensus 338 ~~~~ 341 (343)
++|+
T Consensus 323 ~~~d 326 (388)
T 3pe7_A 323 YVFN 326 (388)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8876
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.35 E-value=3e-10 Score=109.63 Aligned_cols=240 Identities=13% Similarity=0.041 Sum_probs=141.7
Q ss_pred eEEec--CCCCCCCCe-EEEEeecCCCCCCceeeeeCC--CCCCCCCCccCC---CCCCeeEEEcc-CCCeEEEEcCC--
Q 019258 23 AVRWL--PPLSPLSKL-AVLAIYDTDADSPSLETHSIS--LPASLTPHSQWT---PPTRISSLSTS-HQSLVAASTLS-- 91 (343)
Q Consensus 23 ~v~w~--p~~~~~~~~-l~t~s~D~~~~~~~l~~w~~~--~~~~~~~~~~~~---~~~~v~~v~~~-~~~~l~~~s~d-- 91 (343)
..+|+ | +++. |+.++.. . ..|+++++. .......+.... +...+.+++|+ +++.|+.++.+
T Consensus 81 ~~~~~~SP----Dg~~~la~~~~~-~---~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~ 152 (662)
T 3azo_A 81 PWAGVPRP----AGGPLLVFTHFG-D---QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFT 152 (662)
T ss_dssp CEEEECCS----SSSCEEEEEBTT-T---CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred cceeeeec----CCCeEEEEEECC-C---CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEeccc
Confidence 56677 6 7887 7765433 2 246677764 101122222222 45678899999 88889888876
Q ss_pred --------CcEEEEEccC------ceeeeeeccCCccccCeEEEEec--CCEEEEEeCC--------CcEEEEECC-CC-
Q 019258 92 --------GSLHVLSSAM------QVLLSVDENSGFHVGPISGVDLT--GSECVSVGED--------GRVNLVSVI-GG- 145 (343)
Q Consensus 92 --------g~v~v~~~~~------~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~d--------g~v~~wd~~-~~- 145 (343)
..|++|++.. .+...+.. .+...+..+.|+ |+.|+.++.+ ..|.+||+. ++
T Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 153 GEGPSDVRRFLAAVPLDGSAAADRSAVRELSD---DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp SSSTTCEEEEEEEEETTSTTTTCGGGSEESSC---SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred CCCCCCceeEEEEEECCCCccccCCceeEEEe---cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 5889999875 33322220 234567778888 8888877755 379999998 45
Q ss_pred -ceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCC--cEEEEEccccCCCCCeeEEecccCCCCCccc---CeEEEEEcC
Q 019258 146 -GEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGY--GLQWWDLRRAGSGGPVLQFKGNFGSQGKASG---MIHSVDIHP 218 (343)
Q Consensus 146 -~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~v~~~p 218 (343)
.....+...+.. .+..+.|+| +..++++..++ .|.+||+.. ++ ...+....... .... .+..++|+|
T Consensus 230 ~~~~~~l~~~~~~-~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~---~~-~~~l~~~~~~~-~~p~w~~~~~~~~~~~ 303 (662)
T 3azo_A 230 FADTRTLLGGPEE-AIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT---GA-ATQLCRREEEF-AGPLWTPGMRWFAPLA 303 (662)
T ss_dssp EEEEEEEEEETTB-CEEEEEECTTSCEEEEECTTSSCEEEEECTTT---CC-EEESSCCSSBS-SCCCCSTTCCSEEECT
T ss_pred ccccEEeCCCCCc-eEcceEECCCCeEEEEECCCCCeEEEEEECCC---Cc-eeecccccccc-cCccccccCceEeEeC
Confidence 134555544433 689999999 66777777788 555566544 22 33332221100 0000 156788988
Q ss_pred CCCeEEEEEecCCcEEEE--EccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCC--
Q 019258 219 SRKHTCLAGGSSGTVFAW--DLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG-- 294 (343)
Q Consensus 219 ~~~~~~~sg~~dg~v~iw--d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg-- 294 (343)
++. ++++++. +.+++| |+..+ . ...+ ..|...+..+. ++++.. +.+++.+.+.
T Consensus 304 ~~~-~~~~~~~-~~~~l~~~d~~~~-~-~~~l----------~~~~~~~~~~~-s~~~~~--------~~~~~~~~~~~~ 360 (662)
T 3azo_A 304 NGL-IAVVHGK-GAAVLGILDPESG-E-LVDA----------AGPWTEWAATL-TVSGTR--------AVGVAASPRTAY 360 (662)
T ss_dssp TSC-EEEEEBS-SSCEEEEEETTTT-E-EEEC----------CSSCCEEEEEE-EEETTE--------EEEEEEETTEEE
T ss_pred CCE-EEEEEEc-CccEEEEEECCCC-c-EEEe----------cCCCCeEEEEE-ecCCCE--------EEEEEcCCCCCC
Confidence 875 6677788 999999 54432 2 2333 34566676661 444442 0334445554
Q ss_pred eEEEEecC
Q 019258 295 ILAVVEQG 302 (343)
Q Consensus 295 ~i~~~~~~ 302 (343)
.|+.++..
T Consensus 361 ~i~~~d~~ 368 (662)
T 3azo_A 361 EVVELDTV 368 (662)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 46666643
No 175
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.34 E-value=2.1e-09 Score=94.70 Aligned_cols=254 Identities=7% Similarity=-0.081 Sum_probs=157.1
Q ss_pred ceeeeeCCCCCCCCCCc----cCCCCCCeeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-
Q 019258 50 SLETHSISLPASLTPHS----QWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT- 124 (343)
Q Consensus 50 ~l~~w~~~~~~~~~~~~----~~~~~~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~- 124 (343)
+|.++|.........+. ..........+.+.++.++++...++.|.+||..+.+.+.... .......+.++
T Consensus 18 ~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~~~~p~~i~~~~ 93 (328)
T 3dsm_A 18 TLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT----GFTSPRYIHFLS 93 (328)
T ss_dssp EEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE----CCSSEEEEEEEE
T ss_pred eEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC----CCCCCcEEEEeC
Confidence 56688875432211110 0122234667777666667777778999999998665544332 23456788885
Q ss_pred CCEEEEEe-CCCcEEEEECCCCceEEEEEcCCCc----cceEEEEeCCCCEEEEEe-CCCcEEEEEccccCCCCCeeEEe
Q 019258 125 GSECVSVG-EDGRVNLVSVIGGGEFKRVYDGNGL----VGFNCVKWASPTEFVTGG-FGYGLQWWDLRRAGSGGPVLQFK 198 (343)
Q Consensus 125 ~~~~~s~s-~dg~v~~wd~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~l~t~~-~d~~i~iwd~~~~~~~~~~~~~~ 198 (343)
+..+..+. .++.|.+||..+++ +...+..... .....+++.....+++.. .++.|.++|+.+ ++....+.
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~-~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t---~~~~~~i~ 169 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYE-ITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTET---DKVVDELT 169 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTE-EEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTT---TEEEEEEE
T ss_pred CCeEEEEECCCCeEEEEECCCCe-EEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCC---CeEEEEEE
Confidence 33554444 89999999999885 4433332220 024455553344444443 489999999988 55555554
Q ss_pred cccCCCCCcccCeEEEEEcCCCCeEEEEEecC----------CcEEEEEccCCceeeeeecCCCCcccccCCccccEEEE
Q 019258 199 GNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS----------GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEV 268 (343)
Q Consensus 199 ~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d----------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 268 (343)
.. .....+.++|++. +++++..+ +.|.++|.++.+....+. .........+
T Consensus 170 ~g--------~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~----------~~~g~~p~~l 230 (328)
T 3dsm_A 170 IG--------IQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK----------FKLGDWPSEV 230 (328)
T ss_dssp CS--------SCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE----------CCTTCCCEEE
T ss_pred cC--------CCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEEEEe----------cCCCCCceeE
Confidence 32 2356788999886 55555444 789999998754332322 1112357899
Q ss_pred EEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc---ccccc-ccccceeeecCCCCCeeEEc----cCCceEEEE
Q 019258 269 QYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF---ELLAE-PCAINSFDIDPQNPSDVICS----LEWESIAIV 340 (343)
Q Consensus 269 ~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~---~~~~~-~~~i~s~~~~~~~~~~l~~~----~~~~~i~~~ 340 (343)
+|+|++. .++.+.. .|++|+...... .+... ......++++|+++...++. ..++.|++|
T Consensus 231 a~~~d~~----------~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~ 298 (328)
T 3dsm_A 231 QLNGTRD----------TLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRY 298 (328)
T ss_dssp EECTTSC----------EEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEE
T ss_pred EEecCCC----------EEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEE
Confidence 9999877 4655544 899998753322 11221 24578899998666777776 567899988
Q ss_pred eC
Q 019258 341 SR 342 (343)
Q Consensus 341 ~~ 342 (343)
+.
T Consensus 299 d~ 300 (328)
T 3dsm_A 299 SP 300 (328)
T ss_dssp CT
T ss_pred CC
Confidence 63
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.34 E-value=8e-10 Score=94.02 Aligned_cols=231 Identities=9% Similarity=0.026 Sum_probs=148.9
Q ss_pred CeeEEEcc-CCCeEE-EEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceE
Q 019258 73 RISSLSTS-HQSLVA-ASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEF 148 (343)
Q Consensus 73 ~v~~v~~~-~~~~l~-~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~ 148 (343)
...++++. ++.+++ +.+.++.|.+|+......... . ..+...+.++.+. +..+++.. ++.|..||..... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-~--~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~-~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-P--FNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN-Q 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-C--CCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC-C
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-e--eCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce-E
Confidence 67788888 666555 436788999998753322111 1 1233456778887 56555555 8899999987753 3
Q ss_pred EEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEE
Q 019258 149 KRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
... .......+.++++.+ +..+++...++.|.+||... .......... . ....+++++|++. ++++.
T Consensus 100 ~~~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~---~~~~~~~~~~-----~--~~p~~i~~~~~g~-l~v~~ 167 (270)
T 1rwi_B 100 TVL-PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS---KTQTVLPFTG-----L--NDPDGVAVDNSGN-VYVTD 167 (270)
T ss_dssp EEC-CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC---CSCEECCCCS-----C--CSCCCEEECTTCC-EEEEE
T ss_pred eee-ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC---ceeEeecccc-----C--CCceeEEEeCCCC-EEEEE
Confidence 222 222222588999998 66666666788999997644 2222111111 0 3478899999885 66777
Q ss_pred ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccc
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFE 307 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~ 307 (343)
..++.|.+||........ .. ..+...+..|++++++. ..++...++.|+.|+.......
T Consensus 168 ~~~~~i~~~~~~~~~~~~-~~----------~~~~~~p~~i~~d~~g~----------l~v~~~~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 168 TDNNRVVKLEAESNNQVV-LP----------FTDITAPWGIAVDEAGT----------VYVTEHNTNQVVKLLAGSTTST 226 (270)
T ss_dssp GGGTEEEEECTTTCCEEE-CC----------CSSCCSEEEEEECTTCC----------EEEEETTTSCEEEECTTCSCCE
T ss_pred CCCCEEEEEecCCCceEe-ec----------ccCCCCceEEEECCCCC----------EEEEECCCCcEEEEcCCCCcce
Confidence 778899999987643222 11 12235678999999874 5666677889999987644322
Q ss_pred ccc-cc-cccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 308 LLA-EP-CAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 308 ~~~-~~-~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
... .. ..+.++++++ +|...++...++.|++++.
T Consensus 227 ~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 227 VLPFTGLNTPLAVAVDS-DRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp ECCCCSCSCEEEEEECT-TCCEEEEEGGGTEEEEECC
T ss_pred eeccCCCCCceeEEECC-CCCEEEEECCCCEEEEEcC
Confidence 222 22 4578999998 4678888888899999875
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.34 E-value=9.3e-10 Score=95.22 Aligned_cols=230 Identities=12% Similarity=0.028 Sum_probs=146.2
Q ss_pred CCCeeEEEcc-CCC-eEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCc
Q 019258 71 PTRISSLSTS-HQS-LVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGG 146 (343)
Q Consensus 71 ~~~v~~v~~~-~~~-~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~ 146 (343)
.....++.|. +++ +++++..++.|..|+.... ..... .+...+.++.++ +..+++...++.|.+||..+++
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~---~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM---HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE---SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE---CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 3456788998 666 7888889999999998754 22221 245678899997 6776666677899999997764
Q ss_pred eEEEEEcCCC---ccceEEEEeCC-CCEEEEEeCC---------------CcEEEEEccccCCCCCeeEEecccCCCCCc
Q 019258 147 EFKRVYDGNG---LVGFNCVKWAS-PTEFVTGGFG---------------YGLQWWDLRRAGSGGPVLQFKGNFGSQGKA 207 (343)
Q Consensus 147 ~~~~~~~~~~---~~~v~~~~~~~-~~~l~t~~~d---------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 207 (343)
...+..... ...+..+++.+ +..+++.+.. +.-.+|.+.. ...+..+....
T Consensus 102 -~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~---~g~~~~~~~~~------ 171 (296)
T 3e5z_A 102 -WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP---DGTLSAPIRDR------ 171 (296)
T ss_dssp -EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT---TSCEEEEECCC------
T ss_pred -EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECC---CCCEEEeecCC------
Confidence 333322111 11466789999 6666653211 1124454443 23333333222
Q ss_pred ccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCcee---eeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCc
Q 019258 208 SGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQS---IVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRV 284 (343)
Q Consensus 208 ~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~ 284 (343)
.....++|+|++..+ ++.+.++.|.+||+...... .... ..+...+..|++++++.
T Consensus 172 -~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~----------~~~~~~p~~i~~d~~G~--------- 230 (296)
T 3e5z_A 172 -VKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF----------TVEPGKTDGLRVDAGGL--------- 230 (296)
T ss_dssp -SSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE----------CCSSSCCCSEEEBTTSC---------
T ss_pred -CCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe----------eCCCCCCCeEEECCCCC---------
Confidence 557899999998776 78888899999998622221 1111 11344567899998875
Q ss_pred cceEEEecCCeEEEEecCCCcccccccccccceeeecCCCCCeeEEccCCceEEEE
Q 019258 285 LPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIV 340 (343)
Q Consensus 285 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~ 340 (343)
++.+. ++.|.+|+...+....+..+..+.++.+.+.+++.|..++.+ .++.+
T Consensus 231 --l~v~~-~~~v~~~~~~g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~-~l~~~ 282 (296)
T 3e5z_A 231 --IWASA-GDGVHVLTPDGDELGRVLTPQTTSNLCFGGPEGRTLYMTVST-EFWSI 282 (296)
T ss_dssp --EEEEE-TTEEEEECTTSCEEEEEECSSCCCEEEEESTTSCEEEEEETT-EEEEE
T ss_pred --EEEEc-CCeEEEECCCCCEEEEEECCCCceeEEEECCCCCEEEEEcCC-eEEEE
Confidence 34444 889999998755444444333388888853356777777755 44443
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.34 E-value=2.5e-08 Score=85.70 Aligned_cols=273 Identities=7% Similarity=-0.043 Sum_probs=169.0
Q ss_pred ccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEE
Q 019258 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHV 96 (343)
Q Consensus 18 ~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v 96 (343)
...+.+|+..| +++++++...++ .|..|+.. .. ............+.++.+. ++.++++...++.|..
T Consensus 14 ~~~~~~i~~d~----~g~l~v~~~~~~-----~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 14 DTGPYGITVSD----KGKVWITQHKAN-----MISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGR 82 (299)
T ss_dssp SCCEEEEEECT----TSCEEEEETTTT-----EEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCCccceEECC----CCCEEEEecCCC-----cEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEE
Confidence 35789999999 777777654343 36677764 11 1111111234678899998 6677777666888999
Q ss_pred EEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEE
Q 019258 97 LSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVT 173 (343)
Q Consensus 97 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t 173 (343)
|+... . +...... .....+.++.+. +..+++...++.|..||. +++ ............+..+.+.+ +..+++
T Consensus 83 ~~~~g-~-~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~ 157 (299)
T 2z2n_A 83 ITKKG-I-IKEYTLP-NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK-IREYELPNKGSYPSFITLGSDNALWFT 157 (299)
T ss_dssp ECTTS-C-EEEEECS-STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECTTSCEEEE
T ss_pred ECCCC-c-EEEEeCC-CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC-EEEecCCCCCCCCceEEEcCCCCEEEE
Confidence 98752 2 2111111 133467888887 666677777889999998 443 33332222222588999998 556665
Q ss_pred EeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCC
Q 019258 174 GGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTG 253 (343)
Q Consensus 174 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~ 253 (343)
...++.|..||. . ++ +..+..... . ..+..+++++++. ++++...++.|..||. ++... .+..
T Consensus 158 ~~~~~~i~~~~~-~---g~-~~~~~~~~~-~----~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~-~~~~---- 220 (299)
T 2z2n_A 158 ENQNNAIGRITE-S---GD-ITEFKIPTP-A----SGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEIT-EFKI---- 220 (299)
T ss_dssp ETTTTEEEEECT-T---CC-EEEEECSST-T----CCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEE-EEEC----
T ss_pred eCCCCEEEEEcC-C---Cc-EEEeeCCCC-C----CcceeEEECCCCC-EEEEccCCceEEEECC-CCcEE-EEEC----
Confidence 556789999998 5 33 223321110 1 4588999999875 5666666889999998 54322 2210
Q ss_pred cccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcccc-cc-cccccceeeecCCCCCeeEEc
Q 019258 254 EAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFEL-LA-EPCAINSFDIDPQNPSDVICS 331 (343)
Q Consensus 254 ~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~-~~-~~~~i~s~~~~~~~~~~l~~~ 331 (343)
..+...+.++++++++. ..++...++.|..|+........ .. ....+.++.+ + ++...++.
T Consensus 221 -----~~~~~~~~~i~~~~~g~----------l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~-~-~g~l~v~~ 283 (299)
T 2z2n_A 221 -----PTPNARPHAITAGAGID----------LWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICF-D-GETIWFAM 283 (299)
T ss_dssp -----SSTTCCEEEEEECSTTC----------EEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEE-C-SSCEEEEE
T ss_pred -----CCCCCCceeEEECCCCC----------EEEeccCCceEEEECCCCceEEEeCCCCCCccceEEe-c-CCCEEEEe
Confidence 22446788999998865 44555578899999874322222 11 1245788888 5 55666665
Q ss_pred cCCceEEEEe
Q 019258 332 LEWESIAIVS 341 (343)
Q Consensus 332 ~~~~~i~~~~ 341 (343)
. .+.+..++
T Consensus 284 ~-~~~l~~~~ 292 (299)
T 2z2n_A 284 E-CDKIGKLT 292 (299)
T ss_dssp T-TTEEEEEE
T ss_pred c-CCcEEEEE
Confidence 5 45666554
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.32 E-value=8.7e-10 Score=93.80 Aligned_cols=236 Identities=8% Similarity=-0.036 Sum_probs=150.2
Q ss_pred ceeeEEecCCCCCCCCeEE-EEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEE
Q 019258 20 YIDAVRWLPPLSPLSKLAV-LAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVL 97 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~-t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~ 97 (343)
....|++.| ++++++ +.+.++ .|..|+....... .........+.++++. ++.++++.. ++.|.+|
T Consensus 25 ~p~~i~~~~----~g~l~v~~~~~~~-----~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~ 92 (270)
T 1rwi_B 25 SPSGVAVDS----AGNVYVTSEGMYG-----RVVKLATGSTGTT--VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTL 92 (270)
T ss_dssp CEEEEEECT----TCCEEEEECSSSC-----EEEEECC-----E--ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEE
T ss_pred CccceEECC----CCCEEEEccCCCC-----cEEEecCCCcccc--eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEE
Confidence 788999999 777777 434443 3667776332111 1112223467889998 666555555 8899999
Q ss_pred EccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEE
Q 019258 98 SSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTG 174 (343)
Q Consensus 98 ~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~ 174 (343)
+......... . ........++.+. +..+++...++.|..|+..+... ... .......+.++++.+ +..+++.
T Consensus 93 d~~~~~~~~~-~--~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-~~~-~~~~~~~p~~i~~~~~g~l~v~~ 167 (270)
T 1rwi_B 93 AAGSNNQTVL-P--FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-TVL-PFTGLNDPDGVAVDNSGNVYVTD 167 (270)
T ss_dssp CTTCSCCEEC-C--CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-EEC-CCCSCCSCCCEEECTTCCEEEEE
T ss_pred eCCCceEeee-e--cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-Eee-ccccCCCceeEEEeCCCCEEEEE
Confidence 8764322211 1 1123467888887 67777777788999998665432 211 111112478889998 6666666
Q ss_pred eCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCc
Q 019258 175 GFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGE 254 (343)
Q Consensus 175 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~ 254 (343)
..++.|.+||... .. ........ . ..+.+++++|++ .++++...++.|.+||...... ....
T Consensus 168 ~~~~~i~~~~~~~---~~-~~~~~~~~----~--~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~-~~~~------ 229 (270)
T 1rwi_B 168 TDNNRVVKLEAES---NN-QVVLPFTD----I--TAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS-TVLP------ 229 (270)
T ss_dssp GGGTEEEEECTTT---CC-EEECCCSS----C--CSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC-EECC------
T ss_pred CCCCEEEEEecCC---Cc-eEeecccC----C--CCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc-eeec------
Confidence 6688999999866 22 22211111 1 458899999988 5777777788999999865322 2211
Q ss_pred ccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC
Q 019258 255 AVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE 304 (343)
Q Consensus 255 ~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~ 304 (343)
..+...+.+++++|++. .+++.+.+++|++++...+
T Consensus 230 ----~~~~~~p~~i~~~~~g~----------l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 230 ----FTGLNTPLAVAVDSDRT----------VYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp ----CCSCSCEEEEEECTTCC----------EEEEEGGGTEEEEECCCGG
T ss_pred ----cCCCCCceeEEECCCCC----------EEEEECCCCEEEEEcCCCc
Confidence 12335688999999876 6788889999999987643
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.29 E-value=3.9e-09 Score=102.79 Aligned_cols=275 Identities=8% Similarity=-0.099 Sum_probs=162.6
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCC---ccC--CCCCCeeEEEcc-CCCeEEEEcCCC-----cEEEEEccC
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPH---SQW--TPPTRISSLSTS-HQSLVAASTLSG-----SLHVLSSAM 101 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~---~~~--~~~~~v~~v~~~-~~~~l~~~s~dg-----~v~v~~~~~ 101 (343)
++++++-...+.......|+..+..... ...+ ..+ .+...+..++|+ ++++|+.++.++ .|++||+..
T Consensus 82 dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 82 KGKRYFYFYNTGLQNQRVLYVQDSLEGE-ARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp ETTEEEEEEECSSCSSCEEEEESSTTSC-CEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred ECCEEEEEEEcCCceEEEEEEEcCCCCC-cEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 7877776655543222233444332211 1111 011 223357889999 888887776533 899999986
Q ss_pred ceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCc----------------EEEEECCCCceE-EEEEcCCC-ccceE
Q 019258 102 QVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGR----------------VNLVSVIGGGEF-KRVYDGNG-LVGFN 161 (343)
Q Consensus 102 ~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~----------------v~~wd~~~~~~~-~~~~~~~~-~~~v~ 161 (343)
++...... ....+.++.|+ ++.|+.++.++. |.+|++.++... ..++.... ...+.
T Consensus 161 g~~~~~~~----~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~ 236 (710)
T 2xdw_A 161 AKELPDVL----ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG 236 (710)
T ss_dssp TEEEEEEE----EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred CCCCcccc----cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE
Confidence 65543221 11235678898 788988888766 999999876421 23333221 22477
Q ss_pred EEEeCC-CCEEEEEeC-----CCcEEEEEccccC----CCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC-
Q 019258 162 CVKWAS-PTEFVTGGF-----GYGLQWWDLRRAG----SGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS- 230 (343)
Q Consensus 162 ~~~~~~-~~~l~t~~~-----d~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d- 230 (343)
.+.|+| +..++.++. +..|.+||+.... ....+..+..+. ..+.. .|+|++..+++.+..+
T Consensus 237 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~-------~~~~~-~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF-------EGEYD-YVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp EEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS-------SSCEE-EEEEETTEEEEEECTTC
T ss_pred EEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC-------CcEEE-EEeccCCEEEEEECCCC
Confidence 899999 777776654 6789999986500 011345555443 23333 4778887776665543
Q ss_pred --CcEEEEEccCCce--eeeeecCCCCcccccCCcc-ccEEEEEEeecCCCCcCCCCCccceEEEecCCe--EEEEec-C
Q 019258 231 --GTVFAWDLRWQQQ--SIVLSGVGTGEAVTHSLSE-SEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGI--LAVVEQ-G 302 (343)
Q Consensus 231 --g~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~--i~~~~~-~ 302 (343)
+.|.+||+..+.. ...+. ..+. ..+..+.|++.+. .+++...||. |++|+. .
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~~~~----------lv~~~~~~g~~~l~~~~~~~ 368 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLV----------PEHEKDVLEWVACVRSNF----------LVLCYLHDVKNTLQLHDLAT 368 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEE----------CCCSSCEEEEEEEETTTE----------EEEEEEETTEEEEEEEETTT
T ss_pred CCCEEEEEeCCCCCcccceecc----------CCCCCCeEEEEEEEcCCE----------EEEEEEECCEEEEEEEECCC
Confidence 3699999977531 23333 1222 3688899985544 6788888885 566775 2
Q ss_pred CC-cccccccccccceeeecCCCCCeeEEcc----CCceEEEEe
Q 019258 303 EE-PFELLAEPCAINSFDIDPQNPSDVICSL----EWESIAIVS 341 (343)
Q Consensus 303 ~~-~~~~~~~~~~i~s~~~~~~~~~~l~~~~----~~~~i~~~~ 341 (343)
.. ...+......+.++++++ ++..++.+. ..+.++.++
T Consensus 369 g~~~~~l~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 369 GALLKIFPLEVGSVVGYSGQK-KDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp CCEEEEECCCSSEEEEEECCT-TCSEEEEEEECSSCCCEEEEEE
T ss_pred CCEEEecCCCCceEEEEecCC-CCCEEEEEEeCCCCCCEEEEEE
Confidence 22 223222345678888888 445555332 235777775
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.28 E-value=2.3e-09 Score=94.38 Aligned_cols=239 Identities=8% Similarity=-0.020 Sum_probs=146.9
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEc-CCCcEEE
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAAST-LSGSLHV 96 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s-~dg~v~v 96 (343)
.....|.... ++++++...++ +|.++|.... +.+..++.......++++ ++ .++++. .++.|.+
T Consensus 44 ~~~~~i~~~~-----~~lyv~~~~~~-----~v~viD~~t~---~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~ 109 (328)
T 3dsm_A 44 DVAQSMVIRD-----GIGWIVVNNSH-----VIFAIDINTF---KEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFI 109 (328)
T ss_dssp SCEEEEEEET-----TEEEEEEGGGT-----EEEEEETTTC---CEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEE
T ss_pred ccceEEEEEC-----CEEEEEEcCCC-----EEEEEECccc---EEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEE
Confidence 3455565533 55666655443 4778988542 233344445678899996 55 555555 8999999
Q ss_pred EEccCceeeeeeccCC--ccccCeEEEEecCCEEEEEe--CCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE
Q 019258 97 LSSAMQVLLSVDENSG--FHVGPISGVDLTGSECVSVG--EDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF 171 (343)
Q Consensus 97 ~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~s~s--~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 171 (343)
||..+.+......... ........+.+.++.+..+. .++.|.++|+.+++ ....+.... ....+.+.+ +..+
T Consensus 110 iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~-~~~~i~~g~--~p~~i~~~~dG~l~ 186 (328)
T 3dsm_A 110 INPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDK-VVDELTIGI--QPTSLVMDKYNKMW 186 (328)
T ss_dssp EETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTE-EEEEEECSS--CBCCCEECTTSEEE
T ss_pred EECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCe-EEEEEEcCC--CccceEEcCCCCEE
Confidence 9998655433222111 01112334555655554444 48999999999885 444443322 366788888 4444
Q ss_pred EEEeCC----------CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCC
Q 019258 172 VTGGFG----------YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQ 241 (343)
Q Consensus 172 ~t~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~ 241 (343)
+++..+ +.|.++|..+ .+....+....+ .....++++|++..++++. . .|.+||..+.
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t---~~v~~~~~~~~g------~~p~~la~~~d~~~lyv~~-~--~v~~~d~~t~ 254 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAET---FTVEKQFKFKLG------DWPSEVQLNGTRDTLYWIN-N--DIWRMPVEAD 254 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTT---TEEEEEEECCTT------CCCEEEEECTTSCEEEEES-S--SEEEEETTCS
T ss_pred EEECCCccCCccccCCceEEEEECCC---CeEEEEEecCCC------CCceeEEEecCCCEEEEEc-c--EEEEEECCCC
Confidence 444333 7899999977 454444542211 3578999999887776543 2 8999999775
Q ss_pred ceee-eeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEE----ecCCeEEEEecCCCc
Q 019258 242 QQSI-VLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFC----SEDGILAVVEQGEEP 305 (343)
Q Consensus 242 ~~~~-~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~----s~dg~i~~~~~~~~~ 305 (343)
+... .+. .........++++|++.. ..++. ..+++|.+|+...+.
T Consensus 255 ~~~~~~~~----------~~~~~~p~gi~vdp~~g~---------lyva~~~~y~~~~~V~v~d~~g~~ 304 (328)
T 3dsm_A 255 RVPVRPFL----------EFRDTKYYGLTVNPNNGE---------VYVADAIDYQQQGIVYRYSPQGKL 304 (328)
T ss_dssp SCCSSCSB----------CCCSSCEEEEEECTTTCC---------EEEEECTTSSSEEEEEEECTTCCE
T ss_pred ceeeeeee----------cCCCCceEEEEEcCCCCe---------EEEEcccccccCCEEEEECCCCCE
Confidence 4321 111 112356889999997664 45555 578899999986433
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.28 E-value=1.2e-09 Score=106.22 Aligned_cols=251 Identities=11% Similarity=-0.087 Sum_probs=152.2
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCc-----
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGS----- 93 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~----- 93 (343)
.+..++|+| ++++||-++.........|++|++.+..... ...+. ......+.|+ ++..|+.++.+..
T Consensus 122 ~~~~~~~SP----DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~-~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 122 SLGTWAVSW----DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIE-GGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp EEEEEEECT----TSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBS-CCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred EEEEEEECC----CCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccC-cccccceEEecCCCEEEEEEecCCCCCcc
Confidence 588999999 8988885544322122468899996543210 01111 1122688999 8888988888776
Q ss_pred --------EEEEEccCce--eeeeeccCCccccCeEEEEec--CCEEEEEeCCC----cEEEEECCCCceEEEEEcCCCc
Q 019258 94 --------LHVLSSAMQV--LLSVDENSGFHVGPISGVDLT--GSECVSVGEDG----RVNLVSVIGGGEFKRVYDGNGL 157 (343)
Q Consensus 94 --------v~v~~~~~~~--~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg----~v~~wd~~~~~~~~~~~~~~~~ 157 (343)
|++|++.... ...+.. ...|...+.++.|+ |+.++..+.++ .|.+||..++ ....+.....
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~- 272 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHE-RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK-DFRLLVKGVG- 272 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEEC-CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS-SCEEEEECSS-
T ss_pred ccCCCCCEEEEEECCCCchhceEEEe-cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC-ceEEeecCCC-
Confidence 9999997543 122222 22355678889998 77887777665 6677766555 3455544333
Q ss_pred cceEEEEeCCCCEEEEEe---CCCcEEEEEccccCCCCC--eeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCc
Q 019258 158 VGFNCVKWASPTEFVTGG---FGYGLQWWDLRRAGSGGP--VLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT 232 (343)
Q Consensus 158 ~~v~~~~~~~~~~l~t~~---~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~ 232 (343)
.+....+..+..++.+. .++.|.+||+.. +.. ...+..+.. . ..+..++++ +..++++...|+.
T Consensus 273 -~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~---~~~~~~~~l~~~~~-~----~~l~~~~~~--~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 273 -AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAK---PARASWKEIVPEDS-S----ASLLSVSIV--GGHLSLEYLKDAT 341 (695)
T ss_dssp -CCEEEEEETTEEEEEECTTCTTCEEEEEBTTB---CSGGGCEEEECCCS-S----CEEEEEEEE--TTEEEEEEEETTE
T ss_pred -ceEEEEecCCcEEEEECCCCCCCEEEEEeCCC---CCccCCeEEecCCC-C----CeEEEEEEE--CCEEEEEEEECCE
Confidence 34444555544444443 258899999977 332 344443320 1 457788887 3568889999999
Q ss_pred EEEEEccC-CceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe---cCCeEEEEecCCCcccc
Q 019258 233 VFAWDLRW-QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS---EDGILAVVEQGEEPFEL 308 (343)
Q Consensus 233 v~iwd~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s---~dg~i~~~~~~~~~~~~ 308 (343)
.++|.+.. +.....+. ..+.+.+..+.++|++.. .+++.+ ..++|++|+......++
T Consensus 342 ~~l~~~~~~g~~~~~l~----------~~~~~~v~~~~~s~d~~~---------l~~~~ss~~~P~~v~~~d~~~g~~~~ 402 (695)
T 2bkl_A 342 SEVRVATLKGKPVRTVQ----------LPGVGAASNLMGLEDLDD---------AYYVFTSFTTPRQIYKTSVSTGKSEL 402 (695)
T ss_dssp EEEEEEETTCCEEEECC----------CSSSSEECCCBSCTTCSE---------EEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred EEEEEEeCCCCeeEEec----------CCCCeEEEEeecCCCCCE---------EEEEEcCCCCCCEEEEEECCCCcEEE
Confidence 88886652 22222221 112567788888887763 333333 34679999875433333
Q ss_pred c
Q 019258 309 L 309 (343)
Q Consensus 309 ~ 309 (343)
+
T Consensus 403 l 403 (695)
T 2bkl_A 403 W 403 (695)
T ss_dssp E
T ss_pred E
Confidence 3
No 183
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.26 E-value=1.2e-07 Score=81.50 Aligned_cols=273 Identities=8% Similarity=-0.073 Sum_probs=167.8
Q ss_pred ccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEE
Q 019258 18 SKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHV 96 (343)
Q Consensus 18 ~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v 96 (343)
...+..|...+ ++.++++...++ .|..++.. .. ......-.....+.++.+. ++.++++...++.|..
T Consensus 19 ~~~p~~i~~d~----~g~l~v~~~~~~-----~v~~~~~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~ 87 (300)
T 2qc5_A 19 DSGPYGITSSE----DGKVWFTQHKAN-----KISSLDQS-GR-IKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGK 87 (300)
T ss_dssp TCCEEEEEECT----TSCEEEEETTTT-----EEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCCcceeeECC----CCCEEEEcCCCC-----eEEEECCC-Cc-eEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEE
Confidence 45788899988 777777665443 35577664 11 1111111223568888888 6666776666888999
Q ss_pred EEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEE
Q 019258 97 LSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVT 173 (343)
Q Consensus 97 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t 173 (343)
|+.. .+.... ... .....+.++.+. +..+++...++.|..+|.. ++ ............+.++.+.+ ++.+++
T Consensus 88 ~d~~-g~~~~~-~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~d~~g~l~v~ 162 (300)
T 2qc5_A 88 LSKK-GGFTEY-PLP-QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT-IYEYDLPNKGSYPAFITLGSDNALWFT 162 (300)
T ss_dssp ECTT-SCEEEE-ECS-STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSSEEEE
T ss_pred ECCC-CCeEEe-cCC-CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC-EEEccCCCCCCCceeEEECCCCCEEEE
Confidence 9876 322211 111 123567888887 6677776668899999987 43 33332222222688999988 665665
Q ss_pred EeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCC
Q 019258 174 GGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTG 253 (343)
Q Consensus 174 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~ 253 (343)
...++.|..+|. . ++. ..+.... .. ..+..+++++++ .++++...++.|..||. .+.......
T Consensus 163 ~~~~~~i~~~~~-~---g~~-~~~~~~~-~~----~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~----- 225 (300)
T 2qc5_A 163 ENQNNSIGRITN-T---GKL-EEYPLPT-NA----AAPVGITSGNDG-ALWFVEIMGNKIGRITT-TGEISEYDI----- 225 (300)
T ss_dssp ETTTTEEEEECT-T---CCE-EEEECSS-TT----CCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEEEEC-----
T ss_pred ecCCCeEEEECC-C---CcE-EEeeCCC-CC----CCcceEEECCCC-CEEEEccCCCEEEEEcC-CCcEEEEEC-----
Confidence 555888999998 4 232 2332211 01 458899999987 46666566778999998 323222111
Q ss_pred cccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcccc-cc-cccccceeeecCCCCCeeEEc
Q 019258 254 EAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFEL-LA-EPCAINSFDIDPQNPSDVICS 331 (343)
Q Consensus 254 ~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~-~~-~~~~i~s~~~~~~~~~~l~~~ 331 (343)
..+...+.+|++++++. ..++...++.|..++........ .. ....+.++.+++ +|...++.
T Consensus 226 -----~~~~~~~~~i~~d~~g~----------l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~ 289 (300)
T 2qc5_A 226 -----PTPNARPHAITAGKNSE----------IWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGK-DGSVWFAL 289 (300)
T ss_dssp -----SSTTCCEEEEEECSTTC----------EEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECT-TSCEEEEC
T ss_pred -----CCCCCCceEEEECCCCC----------EEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCC-CCCEEEEc
Confidence 22345688999998865 44555567899999874332222 11 134578899988 45666655
Q ss_pred cCCceEEEEe
Q 019258 332 LEWESIAIVS 341 (343)
Q Consensus 332 ~~~~~i~~~~ 341 (343)
. . .|..++
T Consensus 290 ~-~-~i~~~~ 297 (300)
T 2qc5_A 290 K-C-KIGKLN 297 (300)
T ss_dssp S-S-EEEEEE
T ss_pred c-C-ceEEeC
Confidence 5 5 776664
No 184
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=8.6e-09 Score=92.17 Aligned_cols=179 Identities=12% Similarity=0.013 Sum_probs=124.1
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCC--------CCCCCCccCCCCCCeeEEEccCCCeEEEEcCC
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLP--------ASLTPHSQWTPPTRISSLSTSHQSLVAASTLS 91 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~--------~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~d 91 (343)
.++.+++++ ...++++|+.| .+.+|++.+- ....+....++++ |+.|+| ++..|+++ .+
T Consensus 39 ~~nlLais~----~~gll~a~~~~------~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f-d~~~L~v~-~~ 105 (388)
T 1xip_A 39 SLQNLDISN----SKSLFVAASGS------KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF-HGDQVLVS-TR 105 (388)
T ss_dssp CCBCEEEET----TTTEEEEEETT------EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE-ETTEEEEE-ES
T ss_pred cccEEEEcC----CCCEEEEeCCC------EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE-CCCEEEEE-cC
Confidence 699999999 78889999887 3678886321 1122333445677 999999 88999998 88
Q ss_pred CcEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEE
Q 019258 92 GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEF 171 (343)
Q Consensus 92 g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l 171 (343)
+.|++|++......... ..|..++.++.+....++++..||.|.+||+.++. .... .. .|+|++|+|.. +
T Consensus 106 ~~l~v~dv~sl~~~~~~---~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~-~~~~----~~-~Vs~v~WSpkG-~ 175 (388)
T 1xip_A 106 NALYSLDLEELSEFRTV---TSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKS-TKQL----AQ-NVTSFDVTNSQ-L 175 (388)
T ss_dssp SEEEEEESSSTTCEEEE---EECSSCEEEEEECSSEEEEEETTSEEEEEETTTCC-EEEE----EE-SEEEEEECSSE-E
T ss_pred CcEEEEEchhhhccCcc---ceeecceeeEEecCCCEEEEECCCCEEEEEccCCc-cccc----cC-CceEEEEcCCc-e
Confidence 99999999743322211 13566788888775569999999999999998764 3322 12 69999999955 7
Q ss_pred EEEeCCCcEEEEEccccCCCCC--eeEEeccc--CCCCCcccCeEEEEEcCCCCeEE
Q 019258 172 VTGGFGYGLQWWDLRRAGSGGP--VLQFKGNF--GSQGKASGMIHSVDIHPSRKHTC 224 (343)
Q Consensus 172 ~t~~~d~~i~iwd~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~~v~~~p~~~~~~ 224 (343)
+.|..||++++|+... ... ...+.... .+...+...|.+|.|.+++..++
T Consensus 176 ~vg~~dg~i~~~~~~~---~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRN---GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp EEEETTSCEEEEEEET---TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred EEEEcCCcEEEEcCCC---ccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 7899999999998866 221 22341100 00000116699999999865443
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.26 E-value=2.7e-09 Score=103.91 Aligned_cols=244 Identities=11% Similarity=-0.009 Sum_probs=153.2
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCc-----
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGS----- 93 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~----- 93 (343)
.+..++|+| ++++|+.++.++......|++|++.+.... ........+.++.|+ +++.|+.++.++.
T Consensus 126 ~~~~~~~SP----Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~---~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 126 ALRGYAFSE----DGEYFAYGLSASGSDWVTIKFMKVDGAKEL---PDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp EEEEEEECT----TSSEEEEEEEETTCSCEEEEEEETTTTEEE---EEEEEEECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred EEEEEEECC----CCCEEEEEEcCCCCceEEEEEEECCCCCCC---cccccCcccceEEEEeCCCEEEEEEECCcccccc
Confidence 578899999 899998877654222235889999653321 111112236789999 8888888887765
Q ss_pred -----------EEEEEccCcee--eeeeccCCccccCeEEEEec--CCEEEEEeC-----CCcEEEEECCC------Cc-
Q 019258 94 -----------LHVLSSAMQVL--LSVDENSGFHVGPISGVDLT--GSECVSVGE-----DGRVNLVSVIG------GG- 146 (343)
Q Consensus 94 -----------v~v~~~~~~~~--~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~-----dg~v~~wd~~~------~~- 146 (343)
|++|++...+. ..+... ..|...+..+.|+ ++.++..+. +..|.+||+.+ +.
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEF-PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEecc-CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 99999875431 222221 2345567888898 777776654 56899999976 42
Q ss_pred eEEEEEcCCCccceEEEEeCC-CCEEEEEeCC----CcEEEEEccccCCCC--CeeEEecccCCCCCcccCeEEEEEcCC
Q 019258 147 EFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFG----YGLQWWDLRRAGSGG--PVLQFKGNFGSQGKASGMIHSVDIHPS 219 (343)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d----~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~v~~~p~ 219 (343)
....+..... .+.. .|++ +..|+..+.. ..|.+||+.. +. ....+..+.. . ..+..+++.+.
T Consensus 278 ~~~~l~~~~~--~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~---~~~~~~~~l~~~~~-~----~~~~~~~~~~~ 346 (710)
T 2xdw_A 278 KWVKLIDNFE--GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTD---PEESKWKVLVPEHE-K----DVLEWVACVRS 346 (710)
T ss_dssp CCEEEECSSS--SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTS---CCGGGCEEEECCCS-S----CEEEEEEEETT
T ss_pred ceEEeeCCCC--cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCC---CCcccceeccCCCC-C----CeEEEEEEEcC
Confidence 2444443333 2333 3555 6666655543 3699999876 33 2344544321 0 25788898865
Q ss_pred CCeEEEEEecCCc--EEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe---cCC
Q 019258 220 RKHTCLAGGSSGT--VFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS---EDG 294 (343)
Q Consensus 220 ~~~~~~sg~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s---~dg 294 (343)
..++++...|+. |.+||+..+..... + ..+.+.+..+.++|++.. .+++.+ ..+
T Consensus 347 -~~lv~~~~~~g~~~l~~~~~~~g~~~~~-l----------~~~~~~v~~~~~s~d~~~---------l~~~~ss~~~P~ 405 (710)
T 2xdw_A 347 -NFLVLCYLHDVKNTLQLHDLATGALLKI-F----------PLEVGSVVGYSGQKKDTE---------IFYQFTSFLSPG 405 (710)
T ss_dssp -TEEEEEEEETTEEEEEEEETTTCCEEEE-E----------CCCSSEEEEEECCTTCSE---------EEEEEECSSCCC
T ss_pred -CEEEEEEEECCEEEEEEEECCCCCEEEe-c----------CCCCceEEEEecCCCCCE---------EEEEEeCCCCCC
Confidence 467888888885 56667655443223 3 335677889999987763 333433 346
Q ss_pred eEEEEecCC
Q 019258 295 ILAVVEQGE 303 (343)
Q Consensus 295 ~i~~~~~~~ 303 (343)
+|+.|+...
T Consensus 406 ~i~~~d~~t 414 (710)
T 2xdw_A 406 IIYHCDLTK 414 (710)
T ss_dssp EEEEEETTS
T ss_pred EEEEEECCC
Confidence 899998653
No 186
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=5.8e-10 Score=99.74 Aligned_cols=176 Identities=16% Similarity=0.045 Sum_probs=120.0
Q ss_pred CeeEEEcc-CCCeEEEEcCCCcEEEEEccCce--------eeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECC
Q 019258 73 RISSLSTS-HQSLVAASTLSGSLHVLSSAMQV--------LLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVI 143 (343)
Q Consensus 73 ~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~ 143 (343)
.++.++++ ...++++|+.++ +.+|++...+ ..... ....+.+ |+.+.|++..++.+ .++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~-~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFK-WEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCS-EEEECTT-EEEEEEETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccce-EEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEch
Confidence 68899998 778888888875 6669876222 01110 0112445 99999977777777 88999999998
Q ss_pred CCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeE
Q 019258 144 GGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 144 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~ 223 (343)
+....... ..+.. .+.++.+.+++ +++++.||.|.+||+.. +... .+. ..|.|++|+|+|
T Consensus 115 sl~~~~~~-~~~~~-~v~~i~~~~p~-~av~~~dG~L~v~dl~~---~~~~-~~~----------~~Vs~v~WSpkG--- 174 (388)
T 1xip_A 115 ELSEFRTV-TSFEK-PVFQLKNVNNT-LVILNSVNDLSALDLRT---KSTK-QLA----------QNVTSFDVTNSQ--- 174 (388)
T ss_dssp STTCEEEE-EECSS-CEEEEEECSSE-EEEEETTSEEEEEETTT---CCEE-EEE----------ESEEEEEECSSE---
T ss_pred hhhccCcc-ceeec-ceeeEEecCCC-EEEEECCCCEEEEEccC---Cccc-ccc----------CCceEEEEcCCc---
Confidence 75433333 33333 68888777654 88899999999999987 3332 222 569999999987
Q ss_pred EEEEecCCcEEEEEccCCce--eeeeecCCCCccc-ccCCccccEEEEEEeecCC
Q 019258 224 CLAGGSSGTVFAWDLRWQQQ--SIVLSGVGTGEAV-THSLSESEVWEVQYDCHTK 275 (343)
Q Consensus 224 ~~sg~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~ 275 (343)
++.|..||++++|+....+. ...+.. . ... .+.+|...|.+|.|.+++.
T Consensus 175 ~~vg~~dg~i~~~~~~~~~~~~k~~I~~-P--p~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 175 LAVLLKDRSFQSFAWRNGEMEKQFEFSL-P--SELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECC-C--HHHHTSCTTTSEEEEEEESSSSE
T ss_pred eEEEEcCCcEEEEcCCCccccccceecC-C--cccccccCCCeeEEEEEEecCCe
Confidence 46799999999998876542 112210 0 000 0013678899999998766
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.25 E-value=3.8e-09 Score=93.28 Aligned_cols=256 Identities=12% Similarity=0.043 Sum_probs=152.8
Q ss_pred CCcccceeeEEecCCCCCCCCeEEEEeec--CCC--CCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEc
Q 019258 15 FPQSKYIDAVRWLPPLSPLSKLAVLAIYD--TDA--DSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAAST 89 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~~~~~~~~l~t~s~D--~~~--~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s 89 (343)
+-....+...++ +++.++..... ... ....|++|++...... .+ ..+..+.|+ +++.|+..+
T Consensus 11 l~~~~~~~~~~~------dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~----~l---~~~~~~~~SpDg~~la~~~ 77 (347)
T 2gop_A 11 FAKFAYLSDPRT------KGELVAYVLTKANLKDNKYENTIVIENLKNNARR----FI---ENATMPRISPDGKKIAFMR 77 (347)
T ss_dssp CCCSCEEEEEEE------ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE----EE---ESCEEEEECTTSSEEEEEE
T ss_pred ceeeEEcccceE------CCcEEEEEEeecCcccCCccceEEEEeCCCCceE----Ec---ccCCCeEECCCCCEEEEEE
Confidence 334456777777 35566544321 110 1234889998653211 12 568889999 888888776
Q ss_pred CC---Cc--EEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCC---------------------------C
Q 019258 90 LS---GS--LHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGED---------------------------G 135 (343)
Q Consensus 90 ~d---g~--v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~d---------------------------g 135 (343)
.+ +. |.+|++..++...+.. +.. +..+.|+ ++.|+.++.+ .
T Consensus 78 ~~~~~~~~~l~~~~~~~g~~~~l~~----~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (347)
T 2gop_A 78 ANEEKKVSEIWVADLETLSSKKILE----AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKT 152 (347)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEE----ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEE
T ss_pred eccCCCcceEEEEECCCCceEEEEc----CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccc
Confidence 53 34 6666776554443332 223 8899998 7778777632 5
Q ss_pred cEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCC-------cEEEEEccccCCCCCeeEEecccCCCCCcc
Q 019258 136 RVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGY-------GLQWWDLRRAGSGGPVLQFKGNFGSQGKAS 208 (343)
Q Consensus 136 ~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 208 (343)
.|.+||+.+++....+.. . .+..+.|+|...++++..+. ...+|.+.. ++ ...+...
T Consensus 153 ~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~---~~-~~~l~~~-------- 216 (347)
T 2gop_A 153 TFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWED---GK-EEKMFEK-------- 216 (347)
T ss_dssp EEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEET---TE-EEEEEEE--------
T ss_pred eEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEecccccccccccccEEEeCC---Cc-eEEeccC--------
Confidence 688999988743144433 2 47888999943666665542 445554434 22 3333321
Q ss_pred cCeEEEEEcCCCCeEEEEEecC-------CcEEEEEccCCceeeeeecCCCCcccccCCccccEEE-EEEeecCCCCcCC
Q 019258 209 GMIHSVDIHPSRKHTCLAGGSS-------GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWE-VQYDCHTKSSNIS 280 (343)
Q Consensus 209 ~~i~~v~~~p~~~~~~~sg~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~~~~~ 280 (343)
..+..+ +|++..+++.+..+ ..|.+|| . .....+. ..|...+.. +.|+ ++
T Consensus 217 ~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~----------~~~~~~~~~~~~~s-dg------ 274 (347)
T 2gop_A 217 VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGIL----------DEVDRGVGQAKIKD-GK------ 274 (347)
T ss_dssp ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESS----------TTCCSEEEEEEEET-TE------
T ss_pred cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-CceEecc----------ccCCcccCCccEEc-Cc------
Confidence 124444 89988765554332 4688888 3 2333333 445677876 8898 54
Q ss_pred CCCccceEEEecCCeEEEEecC-CCcccccccccccceeeecCCCCCeeEEccCCc
Q 019258 281 SSRVLPAMFCSEDGILAVVEQG-EEPFELLAEPCAINSFDIDPQNPSDVICSLEWE 335 (343)
Q Consensus 281 ~~~~~~l~s~s~dg~i~~~~~~-~~~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~ 335 (343)
.+++++.++.+.+| .. .+...+......|.+++++| ..+++++++.
T Consensus 275 -----~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~ 321 (347)
T 2gop_A 275 -----VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE---IVVYLKETAT 321 (347)
T ss_dssp -----EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS---SEEEEEECSS
T ss_pred -----EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC---cEEEEEcCCC
Confidence 47888999988887 54 22333334456789999998 5666665554
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.25 E-value=1.3e-09 Score=96.37 Aligned_cols=223 Identities=10% Similarity=0.040 Sum_probs=137.5
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCC------
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLS------ 91 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~d------ 91 (343)
..+..++|+| +++.|+.++.+...+...|++|++..... ........ +..+.|+ +++.|+.++.+
T Consensus 59 ~~~~~~~~Sp----Dg~~la~~~~~~~~~~~~l~~~~~~~g~~---~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~ 130 (347)
T 2gop_A 59 ENATMPRISP----DGKKIAFMRANEEKKVSEIWVADLETLSS---KKILEAKN-IRSLEWNEDSRKLLIVGFKRREDED 130 (347)
T ss_dssp ESCEEEEECT----TSSEEEEEEEETTTTEEEEEEEETTTTEE---EEEEEESE-EEEEEECTTSSEEEEEEECCCC---
T ss_pred ccCCCeEECC----CCCEEEEEEeccCCCcceEEEEECCCCce---EEEEcCCC-ccceeECCCCCEEEEEEccCCCcCC
Confidence 4577899999 89999988876422333578888854221 11222334 8999999 78877777632
Q ss_pred ---------------------CcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCC-------cEEEEEC
Q 019258 92 ---------------------GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDG-------RVNLVSV 142 (343)
Q Consensus 92 ---------------------g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg-------~v~~wd~ 142 (343)
..|.+|++..++.+..... . .+..+.|+ ...++++..+. ...+|.+
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~----~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 131 FIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK----P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp ------CCCC---------CEEEEEEEETTTTEEEEEEEE----E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEE
T ss_pred cEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC----C-CcccccCCCCeEEEEEecccccccccccccEEEe
Confidence 5688888875554122211 1 56788888 23666665542 4455554
Q ss_pred CCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCC--------CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEE
Q 019258 143 IGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFG--------YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHS 213 (343)
Q Consensus 143 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 213 (343)
+++ ....+... . .+..+ +| +..++.++.+ ..|.+|| . ++ ...+.... . ..+..
T Consensus 206 d~~-~~~~l~~~--~-~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~---~~-~~~l~~~~--~----~~~~~ 267 (347)
T 2gop_A 206 EDG-KEEKMFEK--V-SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G---KE-VMGILDEV--D----RGVGQ 267 (347)
T ss_dssp ETT-EEEEEEEE--E-SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S---SC-EEESSTTC--C----SEEEE
T ss_pred CCC-ceEEeccC--c-ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C---Cc-eEeccccC--C----cccCC
Confidence 444 45544433 2 45555 66 6667666644 3688888 4 33 22322111 1 45775
Q ss_pred -EEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEec
Q 019258 214 -VDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSE 292 (343)
Q Consensus 214 -v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~ 292 (343)
+.|+ ++ ++++++.++.+++| +.. .....+. .+...|.++.|+| . .+++++.
T Consensus 268 ~~~~s-dg--~~~~~~~~~~~~l~-~~~-g~~~~~~-----------~~~~~v~~~~~s~--~----------~~~~~~~ 319 (347)
T 2gop_A 268 AKIKD-GK--VYFTLFEEGSVNLY-IWD-GEIKPIA-----------KGRHWIMGFDVDE--I----------VVYLKET 319 (347)
T ss_dssp EEEET-TE--EEEEEEETTEEEEE-EES-SSEEEEE-----------CSSSEEEEEEESS--S----------EEEEEEC
T ss_pred ccEEc-Cc--EEEEEecCCcEEEE-EcC-CceEEEe-----------cCCCeEEeeeeeC--c----------EEEEEcC
Confidence 8898 65 77889999999999 874 3333333 2467899999998 3 5777776
Q ss_pred CCe---EEEEe
Q 019258 293 DGI---LAVVE 300 (343)
Q Consensus 293 dg~---i~~~~ 300 (343)
++. |+.++
T Consensus 320 ~~~~~~l~~~~ 330 (347)
T 2gop_A 320 ATRLRELFTWD 330 (347)
T ss_dssp SSSCCEEEEES
T ss_pred CCChHHheEeC
Confidence 664 55555
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.24 E-value=3.1e-09 Score=94.87 Aligned_cols=269 Identities=9% Similarity=-0.010 Sum_probs=157.3
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeec-CC----CCCCceeeeeCCCCCCCCCCccCC-------CCCCeeEEE
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYD-TD----ADSPSLETHSISLPASLTPHSQWT-------PPTRISSLS 78 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D-~~----~~~~~l~~w~~~~~~~~~~~~~~~-------~~~~v~~v~ 78 (343)
.+.+++....- .++++| +++++..++.. .. ...-.|.+||.... +....+. +......+.
T Consensus 43 ~~~~i~~g~~p-~i~~sp----dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~---~~~~~i~~~~~~~~~g~~p~~i~ 114 (361)
T 2oiz_A 43 FLGMVPTAFNG-HVQVSN----DGKKIYTMTTYHERITRGKRSDVVEVWDADKL---TFEKEISLPPKRVQGLNYDGLFR 114 (361)
T ss_dssp EEEEEECCEEE-EEEECT----TSSEEEEEEEEETTSSSSCEEEEEEEEETTTC---CEEEEEEECTTBCCBCCCGGGEE
T ss_pred EEEEecCCCCC-ceEECC----CCCEEEEEEecccccccCCCCCEEEEEECcCC---cEEEEEEcCccccccCCCcceEE
Confidence 34445444444 889999 88888777531 00 00013679988532 2222221 234577899
Q ss_pred cc-CCCeEEEEcC--CCcEEEEEccCceeeee-eccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCC-CceEEE
Q 019258 79 TS-HQSLVAASTL--SGSLHVLSSAMQVLLSV-DENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIG-GGEFKR 150 (343)
Q Consensus 79 ~~-~~~~l~~~s~--dg~v~v~~~~~~~~~~~-~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~-~~~~~~ 150 (343)
++ ++++|+++.. ++.|.+||+...+.+.. ... +....+.+. ...+++.+.||.+.+|+... ++ ...
T Consensus 115 ~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-----~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~-~~~ 188 (361)
T 2oiz_A 115 QTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-----AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK-VAS 188 (361)
T ss_dssp ECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-----TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS-EEE
T ss_pred ECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-----CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc-Eee
Confidence 99 8888888864 68999999986655433 221 122223333 46788999999999999865 43 331
Q ss_pred EE------cCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCC-e-eEEeccc---CCCCCcccCeEEEEEcC
Q 019258 151 VY------DGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGP-V-LQFKGNF---GSQGKASGMIHSVDIHP 218 (343)
Q Consensus 151 ~~------~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~-~-~~~~~~~---~~~~~~~~~i~~v~~~p 218 (343)
.. ..... .+ .+.+.+ +..++..+.++.|.++|+.. ... + ..+.... ...+.......-++++|
T Consensus 189 ~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~---~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~ 263 (361)
T 2oiz_A 189 QSRSKQMFSVKDD-PI-FIAPALDKDKAHFVSYYGNVYSADFSG---DEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR 263 (361)
T ss_dssp EEECCCCSCTTTS-CB-CSCCEECSSEEEEEBTTSEEEEEECSS---SSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred eccccceEcCCCC-ce-EEEecccCCEEEEEeCCCeEEEEEecC---CCceecccccccCccccccccccCCeeEEEEec
Confidence 11 11111 11 112223 44666677899999999965 221 1 1121100 00000001122368999
Q ss_pred CCCeEEEEEec----------CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceE
Q 019258 219 SRKHTCLAGGS----------SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAM 288 (343)
Q Consensus 219 ~~~~~~~sg~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~ 288 (343)
++..++++... ++.|.+||+.+.+....+. .+. .++|+|+|++. +|+
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~-----------~~~--p~~ia~spdg~----------~l~ 320 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP-----------GRD--ALSMTIDQQRN----------LML 320 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE-----------CTT--CCEEEEETTTT----------EEE
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe-----------cCC--eeEEEECCCCC----------EEE
Confidence 98877766541 3479999998865443333 333 89999999988 677
Q ss_pred EEecCCeEEEEecCCC---ccccc-ccccccceeeecC
Q 019258 289 FCSEDGILAVVEQGEE---PFELL-AEPCAINSFDIDP 322 (343)
Q Consensus 289 s~s~dg~i~~~~~~~~---~~~~~-~~~~~i~s~~~~~ 322 (343)
+++. ++|.+||.... ....+ .....-+.|.++|
T Consensus 321 v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 321 TLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp EECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECC
T ss_pred EeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecC
Confidence 7776 99999997543 22221 2234457788888
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.23 E-value=3e-09 Score=93.51 Aligned_cols=231 Identities=9% Similarity=-0.030 Sum_probs=142.9
Q ss_pred CCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceE
Q 019258 72 TRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEF 148 (343)
Q Consensus 72 ~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~ 148 (343)
..|.++.|+ +...++..+.++.++.|.- +...... .+...+.++.|+ +..++++..++.|.+||..+++ .
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~-~ 78 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA---EPWLEIS---KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE-I 78 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---EEEEEEE---SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC-E
T ss_pred cccceeeecCCccceeEEeecccCccccc---ceeEEEe---ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc-E
Confidence 346677777 4445555567888888822 2222221 244456888888 6766788889999999998874 4
Q ss_pred EEEEcCCCccceEEEEeCC-CCEEEEEeCC----CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeE
Q 019258 149 KRVYDGNGLVGFNCVKWAS-PTEFVTGGFG----YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~ 223 (343)
......+.. .+.++++++ +..+++...+ +.|.+||... ......+.... ....+..++++|++. +
T Consensus 79 ~~~~~~~~~-~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~---~~~~~~~~~~~-----~~~~~~~i~~d~~g~-l 148 (333)
T 2dg1_A 79 KRPFVSHKA-NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG---DNLQDIIEDLS-----TAYCIDDMVFDSKGG-F 148 (333)
T ss_dssp EEEEECSSS-SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS---CSCEEEECSSS-----SCCCEEEEEECTTSC-E
T ss_pred EEEeeCCCC-CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC---CEEEEEEccCc-----cCCcccceEECCCCC-E
Confidence 444322333 699999999 5555555555 6899999876 33221222111 114689999999885 4
Q ss_pred EEEEec------CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEE
Q 019258 224 CLAGGS------SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILA 297 (343)
Q Consensus 224 ~~sg~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~ 297 (343)
+++... .+.|..+|..... ...+. .+...+..++|+|++.. ..++.+.++.|+
T Consensus 149 ~v~~~~~~~~~~~~~l~~~~~~~~~-~~~~~-----------~~~~~~~~i~~~~dg~~---------l~v~~~~~~~i~ 207 (333)
T 2dg1_A 149 YFTDFRGYSTNPLGGVYYVSPDFRT-VTPII-----------QNISVANGIALSTDEKV---------LWVTETTANRLH 207 (333)
T ss_dssp EEEECCCBTTBCCEEEEEECTTSCC-EEEEE-----------EEESSEEEEEECTTSSE---------EEEEEGGGTEEE
T ss_pred EEEeccccccCCCceEEEEeCCCCE-EEEee-----------cCCCcccceEECCCCCE---------EEEEeCCCCeEE
Confidence 444433 3566666665422 22221 12345788999999763 344556788999
Q ss_pred EEecCC--Ccccc-----c---ccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 298 VVEQGE--EPFEL-----L---AEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 298 ~~~~~~--~~~~~-----~---~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+|+... ..... . .....+..+.+++ +|...++...++.|++|+
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT-TCCEEEEEETTTEEEEEC
T ss_pred EEEecCCCcCcccccceEEEecCCCCCCCceEECC-CCCEEEEEcCCCEEEEEC
Confidence 998742 11111 1 1112567788988 467777776677888885
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.22 E-value=3.4e-09 Score=103.00 Aligned_cols=269 Identities=10% Similarity=-0.075 Sum_probs=159.2
Q ss_pred CCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCcc-----CCCCCCeeEEEcc-CCCeEEEE-----cCCCcEEEEEcc
Q 019258 32 PLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQ-----WTPPTRISSLSTS-HQSLVAAS-----TLSGSLHVLSSA 100 (343)
Q Consensus 32 ~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~-----~~~~~~v~~v~~~-~~~~l~~~-----s~dg~v~v~~~~ 100 (343)
+++++++-...+.......|+..+..... ...+.. -.|...+.++.|+ ++++|+.+ +.+..|++||+.
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQ-EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSC-CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCC-cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37888887776653223344444442221 111111 1233468899999 88887733 334689999998
Q ss_pred CceeeeeeccCCccccCe--EEEEec--CCEEEEEeCCCc-------------EEEEECCCCce-EEEEEcCCC-ccceE
Q 019258 101 MQVLLSVDENSGFHVGPI--SGVDLT--GSECVSVGEDGR-------------VNLVSVIGGGE-FKRVYDGNG-LVGFN 161 (343)
Q Consensus 101 ~~~~~~~~~~~~~h~~~v--~~~~~~--~~~~~s~s~dg~-------------v~~wd~~~~~~-~~~~~~~~~-~~~v~ 161 (343)
.++.+... +...+ ..+.|+ ++.|+.++.|.. |++|++.++.. ...++.... ...+.
T Consensus 156 tg~~~~~~-----~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~ 230 (695)
T 2bkl_A 156 SGEWSKVD-----VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL 230 (695)
T ss_dssp TCCBCSSC-----CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE
T ss_pred CCCCcCCc-----ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE
Confidence 65543111 11122 578888 788999988876 99999987642 123333221 12588
Q ss_pred EEEeCC-CCEEEEEeCCC----cEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe---cCCcE
Q 019258 162 CVKWAS-PTEFVTGGFGY----GLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG---SSGTV 233 (343)
Q Consensus 162 ~~~~~~-~~~l~t~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~---~dg~v 233 (343)
.+.|+| +..++.++.++ .|.+||... ..+..+..+. ..+....+ |++. +++... .++.|
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~----~~~~~l~~~~-------~~~~~~~~-~~g~-l~~~s~~~~~~~~l 297 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSENDVYWKRPGE----KDFRLLVKGV-------GAKYEVHA-WKDR-FYVLTDEGAPRQRV 297 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEEEEEECTTC----SSCEEEEECS-------SCCEEEEE-ETTE-EEEEECTTCTTCEE
T ss_pred EEEECCCCCEEEEEEeCCCCceEEEEEcCCC----CceEEeecCC-------CceEEEEe-cCCc-EEEEECCCCCCCEE
Confidence 999999 66777666655 566665433 3445555443 33445555 5566 655544 35889
Q ss_pred EEEEccCCce--eeeeecCCCCcccccCCc-cccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC--CC-ccc
Q 019258 234 FAWDLRWQQQ--SIVLSGVGTGEAVTHSLS-ESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG--EE-PFE 307 (343)
Q Consensus 234 ~iwd~~~~~~--~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~--~~-~~~ 307 (343)
.+||+.++.. ...+. ..+ ...+..+.|+ ++. .+++...|+..++|... .. ...
T Consensus 298 ~~~d~~~~~~~~~~~l~----------~~~~~~~l~~~~~~-~~~----------lv~~~~~dg~~~l~~~~~~g~~~~~ 356 (695)
T 2bkl_A 298 FEVDPAKPARASWKEIV----------PEDSSASLLSVSIV-GGH----------LSLEYLKDATSEVRVATLKGKPVRT 356 (695)
T ss_dssp EEEBTTBCSGGGCEEEE----------CCCSSCEEEEEEEE-TTE----------EEEEEEETTEEEEEEEETTCCEEEE
T ss_pred EEEeCCCCCccCCeEEe----------cCCCCCeEEEEEEE-CCE----------EEEEEEECCEEEEEEEeCCCCeeEE
Confidence 9999976532 13333 222 4567888887 333 67888999987665432 22 222
Q ss_pred ccc-cccccceeeecCCCCCeeE----EccCCceEEEEe
Q 019258 308 LLA-EPCAINSFDIDPQNPSDVI----CSLEWESIAIVS 341 (343)
Q Consensus 308 ~~~-~~~~i~s~~~~~~~~~~l~----~~~~~~~i~~~~ 341 (343)
+.. ....+.++++++ +++.++ +....+.|++|+
T Consensus 357 l~~~~~~~v~~~~~s~-d~~~l~~~~ss~~~P~~v~~~d 394 (695)
T 2bkl_A 357 VQLPGVGAASNLMGLE-DLDDAYYVFTSFTTPRQIYKTS 394 (695)
T ss_dssp CCCSSSSEECCCBSCT-TCSEEEEEEEETTEEEEEEEEE
T ss_pred ecCCCCeEEEEeecCC-CCCEEEEEEcCCCCCCEEEEEE
Confidence 222 245678888888 456666 333346788775
No 192
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.22 E-value=8.7e-08 Score=82.30 Aligned_cols=232 Identities=6% Similarity=-0.048 Sum_probs=148.6
Q ss_pred CCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceE
Q 019258 72 TRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEF 148 (343)
Q Consensus 72 ~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~ 148 (343)
..+.++.+. ++.++++...++.|.+|+.. .. +...... .+...+.++.+. +..+++...++.|..||.... .
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--~ 89 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GK-ITEYPLP-TPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI--I 89 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEECS-STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC--E
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CC-eEEecCC-cccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc--E
Confidence 578899988 66666666668899999877 33 2221111 234578889887 666777666889999998632 3
Q ss_pred EEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEE
Q 019258 149 KRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
...........+.++.+.+ +..+++...++.|..||. . ++ ...+.... .. ..+..++++|++. ++++.
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~---g~-~~~~~~~~-~~----~~~~~i~~~~~g~-l~v~~ 158 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D---GK-IREYELPN-KG----SYPSFITLGSDNA-LWFTE 158 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T---CC-EEEEECSS-TT----CCEEEEEECTTSC-EEEEE
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C---CC-EEEecCCC-CC----CCCceEEEcCCCC-EEEEe
Confidence 3332221222688999998 666666666889999998 4 22 22332111 01 4589999999874 56666
Q ss_pred ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccc
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFE 307 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~ 307 (343)
..++.|..||. ++... .+.. ......+..+++++++. ..++...++.|..|+.......
T Consensus 159 ~~~~~i~~~~~-~g~~~-~~~~---------~~~~~~~~~i~~~~~g~----------l~v~~~~~~~i~~~~~~g~~~~ 217 (299)
T 2z2n_A 159 NQNNAIGRITE-SGDIT-EFKI---------PTPASGPVGITKGNDDA----------LWFVEIIGNKIGRITTSGEITE 217 (299)
T ss_dssp TTTTEEEEECT-TCCEE-EEEC---------SSTTCCEEEEEECTTSS----------EEEEETTTTEEEEECTTCCEEE
T ss_pred CCCCEEEEEcC-CCcEE-EeeC---------CCCCCcceeEEECCCCC----------EEEEccCCceEEEECCCCcEEE
Confidence 66789999998 43322 2210 22345678999998865 4455556789999988333222
Q ss_pred c-cc-cccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 308 L-LA-EPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 308 ~-~~-~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
. .. ....+.++.+++ +|...++...++.|+.++
T Consensus 218 ~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 218 FKIPTPNARPHAITAGA-GIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp EECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEE
T ss_pred EECCCCCCCceeEEECC-CCCEEEeccCCceEEEEC
Confidence 1 11 124578899998 456666655667888775
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.21 E-value=6.4e-09 Score=89.89 Aligned_cols=234 Identities=10% Similarity=0.025 Sum_probs=144.1
Q ss_pred cccceeeEEecCCCCCCCC-eEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcE
Q 019258 17 QSKYIDAVRWLPPLSPLSK-LAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSL 94 (343)
Q Consensus 17 ~~~~i~~v~w~p~~~~~~~-~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v 94 (343)
.......++|.| +++ +++++..++. |..|+.... .. ....+...+.++++. ++.++++...++.|
T Consensus 26 ~~~~~eg~~~d~----~g~~l~~~~~~~~~-----i~~~~~~~~--~~--~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 26 GFTWTEGPVYVP----ARSAVIFSDVRQNR-----TWAWSDDGQ--LS--PEMHPSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp CCSSEEEEEEEG----GGTEEEEEEGGGTE-----EEEEETTSC--EE--EEESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred CCccccCCeEeC----CCCEEEEEeCCCCE-----EEEEECCCC--eE--EEECCCCCcceeeECCCCcEEEEecCCCeE
Confidence 345678899999 676 7777776653 678887543 11 112345678999998 77777776677899
Q ss_pred EEEEccCceeeeeecc-CCccccCeEEEEec--CCEEEEEeC-----------------CCcEEEEECCCCceEEEEEcC
Q 019258 95 HVLSSAMQVLLSVDEN-SGFHVGPISGVDLT--GSECVSVGE-----------------DGRVNLVSVIGGGEFKRVYDG 154 (343)
Q Consensus 95 ~v~~~~~~~~~~~~~~-~~~h~~~v~~~~~~--~~~~~s~s~-----------------dg~v~~wd~~~~~~~~~~~~~ 154 (343)
.+|+..+++...+... .......++++.+. |..+++.+. .+.|..++.. + ........
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~~~~~~ 170 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-TLSAPIRD 170 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-CEEEEECC
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C-CEEEeecC
Confidence 9999854433222211 11112345677887 777776321 2345555554 3 34444332
Q ss_pred CCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCC-e-eEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC
Q 019258 155 NGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGP-V-LQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG 231 (343)
Q Consensus 155 ~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg 231 (343)
.. ....++|+| ++.+++.+.++.|.+||+.. .+.. . ....... . +.+..++++++|. ++++. ++
T Consensus 171 ~~--~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~--~g~~~~~~~~~~~~--~----~~p~~i~~d~~G~-l~v~~--~~ 237 (296)
T 3e5z_A 171 RV--KPNGLAFLPSGNLLVSDTGDNATHRYCLNA--RGETEYQGVHFTVE--P----GKTDGLRVDAGGL-IWASA--GD 237 (296)
T ss_dssp CS--SEEEEEECTTSCEEEEETTTTEEEEEEECS--SSCEEEEEEEECCS--S----SCCCSEEEBTTSC-EEEEE--TT
T ss_pred CC--CCccEEECCCCCEEEEeCCCCeEEEEEECC--CCcCcCCCeEeeCC--C----CCCCeEEECCCCC-EEEEc--CC
Confidence 22 578999999 66677777789999999973 1332 1 1121111 1 4567899999985 54444 78
Q ss_pred cEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEe-ecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 232 TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYD-CHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 232 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
.|.+||.. ++....+. .+.. +.+++|. |++. .|+.++.+ .|+.++..
T Consensus 238 ~v~~~~~~-g~~~~~~~-----------~~~~-~~~~~f~~~d~~----------~L~v~t~~-~l~~~~~~ 285 (296)
T 3e5z_A 238 GVHVLTPD-GDELGRVL-----------TPQT-TSNLCFGGPEGR----------TLYMTVST-EFWSIETN 285 (296)
T ss_dssp EEEEECTT-SCEEEEEE-----------CSSC-CCEEEEESTTSC----------EEEEEETT-EEEEEECS
T ss_pred eEEEECCC-CCEEEEEE-----------CCCC-ceeEEEECCCCC----------EEEEEcCC-eEEEEEcc
Confidence 99999986 33333322 3445 8899995 6665 57777765 45555543
No 194
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.19 E-value=5.9e-10 Score=100.09 Aligned_cols=222 Identities=7% Similarity=-0.086 Sum_probs=129.4
Q ss_pred CeeEEEcc-CCCeEEEEcC-C--CcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCc
Q 019258 73 RISSLSTS-HQSLVAASTL-S--GSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGG 146 (343)
Q Consensus 73 ~v~~v~~~-~~~~l~~~s~-d--g~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~ 146 (343)
.+.+++|+ +++.|+.... + ..|.+|++...+...+.. .+......+.|+ ++.|+.++.++.|.+||+.+++
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~---~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE---GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC---SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec---CCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 36778898 7787766654 3 367777877554433322 122222235666 8899999999999999998874
Q ss_pred eEEEEEcCCCccceEE-------------------EEeCC-CCEEEEE-----eCCCcEEEEEccccCCCCCeeEEeccc
Q 019258 147 EFKRVYDGNGLVGFNC-------------------VKWAS-PTEFVTG-----GFGYGLQWWDLRRAGSGGPVLQFKGNF 201 (343)
Q Consensus 147 ~~~~~~~~~~~~~v~~-------------------~~~~~-~~~l~t~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~ 201 (343)
...+...+.. .... +.|+| +..++.. ..+..|.+||+.. ++. ..+....
T Consensus 114 -~~~~~~~~~~-~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~---g~~-~~~~~~~ 187 (396)
T 3c5m_A 114 -EQVIYTVDEE-WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIET---GEL-EVIHQDT 187 (396)
T ss_dssp -EEEEEECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTT---CCE-EEEEEES
T ss_pred -cEEEEecccc-cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCC---CcE-EeeccCC
Confidence 4444443322 1112 23344 3333322 3567899999977 443 3333222
Q ss_pred CCCCCcccCeEEEEEcC-CCCeEEEEEecC-----CcEEEEEccCCceeeeeecCCCCcccccCCc-cccEEEEEEeecC
Q 019258 202 GSQGKASGMIHSVDIHP-SRKHTCLAGGSS-----GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLS-ESEVWEVQYDCHT 274 (343)
Q Consensus 202 ~~~~~~~~~i~~v~~~p-~~~~~~~sg~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~ 274 (343)
..+..+.|+| ++..++++.... ..|.+||+... ....+. ... ...+..+.|+|++
T Consensus 188 -------~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~----------~~~~~~~~~~~~~spdg 249 (396)
T 3c5m_A 188 -------AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-NVRKIK----------EHAEGESCTHEFWIPDG 249 (396)
T ss_dssp -------SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-CCEESS----------CCCTTEEEEEEEECTTS
T ss_pred -------cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-ceeEee----------ccCCCccccceEECCCC
Confidence 5688999999 665554443221 46888888653 222222 111 2358889999998
Q ss_pred CCCcCCCCCccceEEEecC-----CeEEEEecCCCcccccccccccceeeecCCCCCeeEEcc
Q 019258 275 KSSNISSSRVLPAMFCSED-----GILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSL 332 (343)
Q Consensus 275 ~~~~~~~~~~~~l~s~s~d-----g~i~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~l~~~~ 332 (343)
. .|+..+.+ +.|++|+........+....... ..++|.+|..+++++
T Consensus 250 ~----------~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 250 S----------AMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp S----------CEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEE
T ss_pred C----------EEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEec
Confidence 7 56666544 44999987543322222211223 778872456777643
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.17 E-value=3.2e-08 Score=85.86 Aligned_cols=236 Identities=9% Similarity=0.089 Sum_probs=144.4
Q ss_pred CeeEEEcc-CCCeEEE-------EcCCCcEEEEEccCceeeeeec-cCCccccCeEEEEec-C-CEEEEEeCCCcEEEEE
Q 019258 73 RISSLSTS-HQSLVAA-------STLSGSLHVLSSAMQVLLSVDE-NSGFHVGPISGVDLT-G-SECVSVGEDGRVNLVS 141 (343)
Q Consensus 73 ~v~~v~~~-~~~~l~~-------~s~dg~v~v~~~~~~~~~~~~~-~~~~h~~~v~~~~~~-~-~~~~s~s~dg~v~~wd 141 (343)
...+++|. ++.++++ +..++.|.+|+....+...... ....+...+.++.+. . ..+..++..+.|..||
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d 98 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ 98 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEe
Confidence 45788888 6666666 4678899999876443322211 001244568889887 4 6666666555799999
Q ss_pred CCCCceEEEE-EcC---CCccceEEEEeCC-CCEEEEEeCC---------------CcEEEEEccccCCCCCeeEEeccc
Q 019258 142 VIGGGEFKRV-YDG---NGLVGFNCVKWAS-PTEFVTGGFG---------------YGLQWWDLRRAGSGGPVLQFKGNF 201 (343)
Q Consensus 142 ~~~~~~~~~~-~~~---~~~~~v~~~~~~~-~~~l~t~~~d---------------~~i~iwd~~~~~~~~~~~~~~~~~ 201 (343)
.. ++ .... ... .....+.++.+.+ ++.+++...+ +.|..||.. .....+....
T Consensus 99 ~~-g~-~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----g~~~~~~~~~ 171 (314)
T 1pjx_A 99 TD-GT-FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-----GQMIQVDTAF 171 (314)
T ss_dssp TT-SC-EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-----SCEEEEEEEE
T ss_pred CC-CC-EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-----CCEEEeccCC
Confidence 88 53 4433 221 1112478999998 5555555444 455555542 2222322211
Q ss_pred CCCCCcccCeEEEEEc----CCCCeEEEEEecCCcEEEEEcc-CCcee-e-eeecCCCCcccccCCcc-ccEEEEEEeec
Q 019258 202 GSQGKASGMIHSVDIH----PSRKHTCLAGGSSGTVFAWDLR-WQQQS-I-VLSGVGTGEAVTHSLSE-SEVWEVQYDCH 273 (343)
Q Consensus 202 ~~~~~~~~~i~~v~~~----p~~~~~~~sg~~dg~v~iwd~~-~~~~~-~-~~~~~~~~~~~~~~~h~-~~v~~v~~~p~ 273 (343)
.....++++ |++..++++...++.|.+||+. .+... . .+.. ...+. .....++++++
T Consensus 172 -------~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~--------~~~~~~~~p~~i~~d~~ 236 (314)
T 1pjx_A 172 -------QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH--------IPGTHEGGADGMDFDED 236 (314)
T ss_dssp -------SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE--------CCCCSSCEEEEEEEBTT
T ss_pred -------CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE--------CCCCCCCCCCceEECCC
Confidence 346789999 9886677776778999999986 22211 0 1110 02233 55788999988
Q ss_pred CCCCcCCCCCccceEEEecCCeEEEEecC-CCcccccccc-cccceeeecCCCCC-eeEEccCCceEEEEe
Q 019258 274 TKSSNISSSRVLPAMFCSEDGILAVVEQG-EEPFELLAEP-CAINSFDIDPQNPS-DVICSLEWESIAIVS 341 (343)
Q Consensus 274 ~~~~~~~~~~~~~l~s~s~dg~i~~~~~~-~~~~~~~~~~-~~i~s~~~~~~~~~-~l~~~~~~~~i~~~~ 341 (343)
+. ..++...++.|..|+.. .+....+..+ ..+.++.+++ ++. ..++...++.|+.++
T Consensus 237 G~----------l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 237 NN----------LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP-QTKTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CC----------EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECT-TSSEEEEEETTTTEEEEEE
T ss_pred CC----------EEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECC-CCCEEEEEeCCCCeEEEEe
Confidence 75 56666678899999876 3333333333 5678899987 556 445555567888775
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.15 E-value=6.7e-09 Score=89.12 Aligned_cols=187 Identities=8% Similarity=-0.024 Sum_probs=129.4
Q ss_pred CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCC
Q 019258 125 GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGS 203 (343)
Q Consensus 125 ~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 203 (343)
++.+++++.|+.|.+||..+++. ...+..+....+.++.+.| ++.++ +.++.|..||. + ++.+.++.....
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~-~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~---G~~~W~~~~~~~- 76 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEI-VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-D---GRELWNIAAPAG- 76 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEE-EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-T---SCEEEEEECCTT-
T ss_pred CcEEEeeCCCCEEEEEECCCCeE-EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-C---CCEEEEEcCCCC-
Confidence 56789999999999999989864 4444444312588889999 55555 56888999998 6 677777775321
Q ss_pred CCCcccCeEEEEEcCCCCeEEEEEec-CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCC
Q 019258 204 QGKASGMIHSVDIHPSRKHTCLAGGS-SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSS 282 (343)
Q Consensus 204 ~~~~~~~i~~v~~~p~~~~~~~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~ 282 (343)
..+.++.+.|++..+ ++.+. ++.|..+|. .++....+.. .... ..+......+.+.+++.
T Consensus 77 -----~~~~~~~~~~dG~~l-v~~~~~~~~v~~vd~-~Gk~l~~~~~-~~~~----~~~~~~~~~v~~~~~G~------- 137 (276)
T 3no2_A 77 -----CEMQTARILPDGNAL-VAWCGHPSTILEVNM-KGEVLSKTEF-ETGI----ERPHAQFRQINKNKKGN------- 137 (276)
T ss_dssp -----CEEEEEEECTTSCEE-EEEESTTEEEEEECT-TSCEEEEEEE-CCSC----SSGGGSCSCCEECTTSC-------
T ss_pred -----ccccccEECCCCCEE-EEecCCCCEEEEEeC-CCCEEEEEec-cCCC----CcccccccCceECCCCC-------
Confidence 358899999998654 55555 778888885 4443333321 0000 11223455667787776
Q ss_pred CccceEEEecCCeEEEEecCCCcccccccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 283 RVLPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 283 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.+++.+.++.|..|+...+..+.+..+....+....+ +|..++++.++++|+.++.
T Consensus 138 ---~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 138 ---YLVPLFATSEVREIAPNGQLLNSVKLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp ---EEEEETTTTEEEEECTTSCEEEEEECSSCCCEEEECT-TSCEEEECBTTSEEEEECT
T ss_pred ---EEEEecCCCEEEEECCCCCEEEEEECCCCccceeEcC-CCCEEEEeCCCCeEEEEeC
Confidence 7889999999999998755555555455566677777 5689999988888888763
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.14 E-value=1e-08 Score=100.39 Aligned_cols=249 Identities=10% Similarity=-0.053 Sum_probs=150.1
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCc-----
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGS----- 93 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~----- 93 (343)
.+..++|+| ++++|+.++.++......|++|++.+.... ........+..+.|+ + +.|+.++.++.
T Consensus 164 ~~~~~~~SP----DG~~la~~~~~~G~e~~~i~v~dl~tg~~~---~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 164 ALDAWAASD----DGRLLAYSVQDGGSDWRTVKFVGVADGKPL---ADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp EEEEEEECT----TSSEEEEEEEETTCSEEEEEEEETTTCCEE---EEEEEEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred EEEeEEECC----CCCEEEEEEcCCCCceEEEEEEECCCCCCC---CccCCCceeccEEEECC-CEEEEEEecCcccccc
Confidence 678899999 899999887653222245889999654321 111111223678898 7 88888876654
Q ss_pred ---------EEEEEccCce--eeeeeccCCccccCeEEEEec--CCEEEEEeCCC-----cEEEEECCCCc-e-EEEEEc
Q 019258 94 ---------LHVLSSAMQV--LLSVDENSGFHVGPISGVDLT--GSECVSVGEDG-----RVNLVSVIGGG-E-FKRVYD 153 (343)
Q Consensus 94 ---------v~v~~~~~~~--~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg-----~v~~wd~~~~~-~-~~~~~~ 153 (343)
|++|++.... ...+... ..|...+..+.|+ |+.++..+.++ .|.+||+.++. . ...+..
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFAT-PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred cccCCCCCEEEEEECCCCchhCEEEecc-CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 8888886433 1222222 2343457888898 77777766543 79999998752 2 344443
Q ss_pred CCCccceEEEEeCCCCEEEEEeC----CCcEEEEEccccCCC-CCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe
Q 019258 154 GNGLVGFNCVKWASPTEFVTGGF----GYGLQWWDLRRAGSG-GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228 (343)
Q Consensus 154 ~~~~~~v~~~~~~~~~~l~t~~~----d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~ 228 (343)
.... .....+..++.|+..+. ++.|.+||+.. + .....+..+. . ..+..+++. +..++++..
T Consensus 315 ~~~~--~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~---~~~~~~~l~~~~--~----~~l~~~~~~--~~~lv~~~~ 381 (741)
T 1yr2_A 315 DLKA--QWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSG---STPRFDTVVPES--K----DNLESVGIA--GNRLFASYI 381 (741)
T ss_dssp SSSS--CEEEEEEETTEEEEEECTTCTTCEEEEEECSS---SSCEEEEEECCC--S----SEEEEEEEE--BTEEEEEEE
T ss_pred CCCc--eEEEEeccCCEEEEEECCCCCCCEEEEEeCCC---CccccEEEecCC--C----CeEEEEEEE--CCEEEEEEE
Confidence 3332 33333322777777665 34599999866 3 2334444332 1 346677776 457888999
Q ss_pred cCCcEEEEEcc-CCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe---cCCeEEEEecCCC
Q 019258 229 SSGTVFAWDLR-WQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS---EDGILAVVEQGEE 304 (343)
Q Consensus 229 ~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s---~dg~i~~~~~~~~ 304 (343)
.|+..++|.+. .+.....+. ..+.+.+..+.++|++.. .+++.+ ..++|+.|+....
T Consensus 382 ~dg~~~l~~~~~~g~~~~~l~----------~~~~~~v~~~~~s~d~~~---------l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 382 HDAKSQVLAFDLDGKPAGAVS----------LPGIGSASGLSGRPGDRH---------AYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp ETTEEEEEEEETTSCEEEECB----------CSSSCEEEEEECCBTCSC---------EEEEEEETTEEEEEEEEETTTT
T ss_pred ECCEEEEEEEeCCCCceeecc----------CCCCeEEEEeecCCCCCE---------EEEEEcCCCCCCEEEEEECCCC
Confidence 99988877654 223222221 123567889999998764 333333 3468999986543
Q ss_pred ccccc
Q 019258 305 PFELL 309 (343)
Q Consensus 305 ~~~~~ 309 (343)
..+++
T Consensus 443 ~~~~l 447 (741)
T 1yr2_A 443 KTTPW 447 (741)
T ss_dssp EEEEC
T ss_pred cEEEE
Confidence 33333
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.13 E-value=1.5e-07 Score=88.74 Aligned_cols=294 Identities=12% Similarity=0.063 Sum_probs=180.0
Q ss_pred CCccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-----CCC
Q 019258 9 PPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-----HQS 83 (343)
Q Consensus 9 ~~~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-----~~~ 83 (343)
...+.+++.+..+..+.++| +++++.+++.|+ .|.+||+... ..+....+........+.|+ +++
T Consensus 187 ~~v~~~i~~g~~p~~v~~Sp----DGr~lyv~~~dg-----~V~viD~~~~-t~~~v~~i~~G~~P~~ia~s~~~~pDGk 256 (567)
T 1qks_A 187 YEIKTVLDTGYAVHISRLSA----SGRYLFVIGRDG-----KVNMIDLWMK-EPTTVAEIKIGSEARSIETSKMEGWEDK 256 (567)
T ss_dssp CCEEEEEECSSCEEEEEECT----TSCEEEEEETTS-----EEEEEETTSS-SCCEEEEEECCSEEEEEEECCSTTCTTT
T ss_pred CeEEEEEeCCCCccceEECC----CCCEEEEEcCCC-----eEEEEECCCC-CCcEeEEEecCCCCceeEEccccCCCCC
Confidence 34566777778888999999 898888888764 3668998411 12334444445566788898 677
Q ss_pred eEEEEcC-CCcEEEEEccCceeeeeeccCC-------cccc-CeEEEEec---CCEEEEEeCCCcEEEEECCCCceEE-E
Q 019258 84 LVAASTL-SGSLHVLSSAMQVLLSVDENSG-------FHVG-PISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFK-R 150 (343)
Q Consensus 84 ~l~~~s~-dg~v~v~~~~~~~~~~~~~~~~-------~h~~-~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~-~ 150 (343)
+++++.. ++.|.++|..+.+.+....... .|.. .+..+..+ ...+++...+|.|.++|....+... .
T Consensus 257 ~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~ 336 (567)
T 1qks_A 257 YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT 336 (567)
T ss_dssp EEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee
Confidence 7777665 6999999987666554433210 1222 56677666 3355666788999999987753222 2
Q ss_pred EEcCCCccceEEEEeCC-CCEEEEEe-CCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe
Q 019258 151 VYDGNGLVGFNCVKWAS-PTEFVTGG-FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228 (343)
Q Consensus 151 ~~~~~~~~~v~~~~~~~-~~~l~t~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~ 228 (343)
.+. ... ...++.|++ +.+++++. .+++|.++|+.+ ++.+..+..-. +..|.+....+ ++|++..+++++.
T Consensus 337 ~i~-~~~-~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t---~kl~~~i~vgg--~~Phpg~g~~~-~~p~~g~v~~t~~ 408 (567)
T 1qks_A 337 EIS-AER-FLHDGGLDGSHRYFITAANARNKLVVIDTKE---GKLVAIEDTGG--QTPHPGRGANF-VHPTFGPVWATSH 408 (567)
T ss_dssp EEE-CCS-SEEEEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSS--SSBCCTTCEEE-EETTTEEEEEEEB
T ss_pred eee-ccc-cccCceECCCCCEEEEEeCCCCeEEEEECCC---CcEEEEEeccC--cCCCCccceee-ECCCCCcEEEeCC
Confidence 222 222 577889999 66665554 589999999988 55555544201 11111111122 5887656666654
Q ss_pred -cCCcEEEEEccCCce------eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEec-------CC
Q 019258 229 -SSGTVFAWDLRWQQQ------SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSE-------DG 294 (343)
Q Consensus 229 -~dg~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~-------dg 294 (343)
.+++|.++|...... ..... ......-..|..+|+++ +++.... .+
T Consensus 409 ~g~~~Vsvid~~~~~~~~~~~kvv~~i----------~~~g~g~~~i~~~p~~~----------~l~v~~~~~~~~~~~~ 468 (567)
T 1qks_A 409 MGDDSVALIGTDPEGHPDNAWKILDSF----------PALGGGSLFIKTHPNSQ----------YLYVDATLNPEAEISG 468 (567)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEE----------ECSCSCCCCEECCTTCS----------EEEEECTTCSSHHHHT
T ss_pred CCCCeEEEecCCCCCCccccCEEEEEE----------ecCCCCCEEEEeCCCCC----------eEEEecCCCCCcccCc
Confidence 568999999876221 11211 11112224477888887 4555442 35
Q ss_pred eEEEEecCCC-------cccccc--------c-ccccceeeecCCCCCeeEEc--c---CCceEEEEe
Q 019258 295 ILAVVEQGEE-------PFELLA--------E-PCAINSFDIDPQNPSDVICS--L---EWESIAIVS 341 (343)
Q Consensus 295 ~i~~~~~~~~-------~~~~~~--------~-~~~i~s~~~~~~~~~~l~~~--~---~~~~i~~~~ 341 (343)
+|.+++.... ..+.+. + ...+..+.+++ +|++|..+ + +++.|.+++
T Consensus 469 ~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 469 SVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNK-DGTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp CEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECT-TSSEEEEEEECCTTSCCEEEEEE
T ss_pred eEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECC-CCCEEEEEeecCCCCCCcEEEEE
Confidence 8999986532 112221 1 34578899998 56766655 2 357888775
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.11 E-value=4.3e-08 Score=84.03 Aligned_cols=215 Identities=7% Similarity=0.007 Sum_probs=141.2
Q ss_pred CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccc-cCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc
Q 019258 81 HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHV-GPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL 157 (343)
Q Consensus 81 ~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~-~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~ 157 (343)
++++|++++.++.|.+||..+++.+-.... +. ..++++.+. ++.++ +.++.|..||. +++...+ +.....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~---~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~-~~~~~~ 76 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL---EKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWN-IAAPAG 76 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC---CTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEE-EECCTT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC---CccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEE-EcCCCC
Confidence 467889999999999999866665433322 22 356777776 77777 45788999998 6654444 444322
Q ss_pred cceEEEEeCC-CCEEEEEeC-CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEE
Q 019258 158 VGFNCVKWAS-PTEFVTGGF-GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235 (343)
Q Consensus 158 ~~v~~~~~~~-~~~l~t~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~i 235 (343)
..+.++.+.+ ++.+++.+. ++.|..+|. . ++.+.++....... ....+...++..+++. ++++...++.|..
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~---Gk~l~~~~~~~~~~-~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~ 150 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILEVNM-K---GEVLSKTEFETGIE-RPHAQFRQINKNKKGN-YLVPLFATSEVRE 150 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEEECT-T---SCEEEEEEECCSCS-SGGGSCSCCEECTTSC-EEEEETTTTEEEE
T ss_pred ccccccEECCCCCEEEEecCCCCEEEEEeC-C---CCEEEEEeccCCCC-cccccccCceECCCCC-EEEEecCCCEEEE
Confidence 2588888888 777777776 677777764 3 56666655321100 0113455667888875 5678889999999
Q ss_pred EEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC-CCcccccccc--
Q 019258 236 WDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG-EEPFELLAEP-- 312 (343)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~-~~~~~~~~~~-- 312 (343)
||.. ++....+.. ......+.+.+++. .+++++.+++|..++.. .+..+.+...
T Consensus 151 ~d~~-G~~~w~~~~------------~~~~~~~~~~~~g~----------~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 151 IAPN-GQLLNSVKL------------SGTPFSSAFLDNGD----------CLVACGDAHCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp ECTT-SCEEEEEEC------------SSCCCEEEECTTSC----------EEEECBTTSEEEEECTTTCCEEEEEEGGGS
T ss_pred ECCC-CCEEEEEEC------------CCCccceeEcCCCC----------EEEEeCCCCeEEEEeCcCCcEEEEecCCCC
Confidence 9987 666666541 13445677777766 67778888899999876 4454444321
Q ss_pred -----cccceeeecCCCCCeeEEcc
Q 019258 313 -----CAINSFDIDPQNPSDVICSL 332 (343)
Q Consensus 313 -----~~i~s~~~~~~~~~~l~~~~ 332 (343)
.-+.++...+ +|..+++.+
T Consensus 208 ~~~~l~~~~~~~~~~-~G~i~v~~~ 231 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQ-NGGLYICNW 231 (276)
T ss_dssp BSCCCSEEEEEEECT-TSCEEEEEE
T ss_pred CCccccccccceEcC-CCCEEEEec
Confidence 1256667776 567777773
No 200
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.11 E-value=1.5e-08 Score=90.35 Aligned_cols=134 Identities=14% Similarity=0.058 Sum_probs=88.7
Q ss_pred CCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEe----------CCCcEEEEECCCCceEEEEEcCC--
Q 019258 90 LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVG----------EDGRVNLVSVIGGGEFKRVYDGN-- 155 (343)
Q Consensus 90 ~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s----------~dg~v~~wd~~~~~~~~~~~~~~-- 155 (343)
.|+.|.+||..+.+.+.... .+..+ .+.++ ++.++++. .+++|.+||+.+.+....+....
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~---~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVP---TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR 103 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEE---CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB
T ss_pred ccCeEEEEECCCCeEEEEec---CCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc
Confidence 47899999987655443322 24444 77887 77787775 36789999998875443332221
Q ss_pred --CccceEEEEeCC-CCEEEEEeC--CCcEEEEEccccCCCCCeeE-EecccCCCCCcccCeEEEEEcCCCCeEEEEEec
Q 019258 156 --GLVGFNCVKWAS-PTEFVTGGF--GYGLQWWDLRRAGSGGPVLQ-FKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS 229 (343)
Q Consensus 156 --~~~~v~~~~~~~-~~~l~t~~~--d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~ 229 (343)
.......++++| ++.++++.. ++.|.+||+.. .+.+.. +.. .....+.+.|.+...+++.+.
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~---~~~~~~~i~~---------~~~~~v~~~p~~~~~~~~~~~ 171 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK---GDYVEDVTAA---------AGCWSVIPQPNRPRSFMTICG 171 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT---TEEEEEEGGG---------TTEEEEEECTTSSSEEEEEET
T ss_pred cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC---CcEEEEEecC---------CCcceeEEcCCCCeeEEEECC
Confidence 011466789999 777777664 68999999988 555544 331 112335677877566778888
Q ss_pred CCcEEEEEccC
Q 019258 230 SGTVFAWDLRW 240 (343)
Q Consensus 230 dg~v~iwd~~~ 240 (343)
||++.+|++..
T Consensus 172 dg~~~~v~~~~ 182 (361)
T 2oiz_A 172 DGGLLTINLGE 182 (361)
T ss_dssp TSSEEEEEECT
T ss_pred CCcEEEEEECC
Confidence 89988888754
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.09 E-value=8.8e-08 Score=93.73 Aligned_cols=272 Identities=11% Similarity=0.010 Sum_probs=157.2
Q ss_pred CCCCeEEEEeecCCCCCCceeeeeCC---CCCCCCCCc---cCC--CCCCeeEEEcc-CCCeEEEEcCC-C----cEEEE
Q 019258 32 PLSKLAVLAIYDTDADSPSLETHSIS---LPASLTPHS---QWT--PPTRISSLSTS-HQSLVAASTLS-G----SLHVL 97 (343)
Q Consensus 32 ~~~~~l~t~s~D~~~~~~~l~~w~~~---~~~~~~~~~---~~~--~~~~v~~v~~~-~~~~l~~~s~d-g----~v~v~ 97 (343)
+++++++-...+.......|+.-+.. +. ....+. .+. +...+.++.|+ ++++|+.++.+ | .|++|
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGT-KGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTC-CCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCC-CCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 48888887776654333344444432 21 111110 112 22367889999 88888777653 3 59999
Q ss_pred EccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCc--------------EEEEECCCCce-EEEEEcCCCc-cce
Q 019258 98 SSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGR--------------VNLVSVIGGGE-FKRVYDGNGL-VGF 160 (343)
Q Consensus 98 ~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~--------------v~~wd~~~~~~-~~~~~~~~~~-~~v 160 (343)
|+..++.+... .+...+..+.|+ ++.|+.++.|+. |.+|++.++.. -..++..... ..+
T Consensus 195 dl~tg~~~~~~----~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 195 GVADGKPLADE----LKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp ETTTCCEEEEE----EEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred ECCCCCCCCcc----CCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 99866544321 111223467787 567777776554 88999877531 1233333221 147
Q ss_pred EEEEeCC-CCEEEEEeCC-----CcEEEEEccccCCC--CCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEec---
Q 019258 161 NCVKWAS-PTEFVTGGFG-----YGLQWWDLRRAGSG--GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS--- 229 (343)
Q Consensus 161 ~~~~~~~-~~~l~t~~~d-----~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~--- 229 (343)
..+.|+| +..++..+.+ ..|.+||+.. + ++...+.... ....... .|++..+++....
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~---~~~~~~~~l~~~~-------~~~~~~~-~~dg~~l~~~s~~~~~ 339 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTN---GKIGPVTALIPDL-------KAQWDFV-DGVGDQLWFVSGDGAP 339 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEET---TEECCCEEEECSS-------SSCEEEE-EEETTEEEEEECTTCT
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCC---CCCcccEEecCCC-------CceEEEE-eccCCEEEEEECCCCC
Confidence 8899999 6667766654 3899999977 3 2145555433 2233333 3777776655432
Q ss_pred CCcEEEEEccCCc-eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEE--ecCCC-c
Q 019258 230 SGTVFAWDLRWQQ-QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVV--EQGEE-P 305 (343)
Q Consensus 230 dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~--~~~~~-~ 305 (343)
++.|.+||+..+. ....+. ..+...+..+.+. +.. .+++...||..++| +.... .
T Consensus 340 ~~~l~~~d~~~~~~~~~~l~----------~~~~~~l~~~~~~--~~~---------lv~~~~~dg~~~l~~~~~~g~~~ 398 (741)
T 1yr2_A 340 LKKIVRVDLSGSTPRFDTVV----------PESKDNLESVGIA--GNR---------LFASYIHDAKSQVLAFDLDGKPA 398 (741)
T ss_dssp TCEEEEEECSSSSCEEEEEE----------CCCSSEEEEEEEE--BTE---------EEEEEEETTEEEEEEEETTSCEE
T ss_pred CCEEEEEeCCCCccccEEEe----------cCCCCeEEEEEEE--CCE---------EEEEEEECCEEEEEEEeCCCCce
Confidence 4569999987642 334444 3344556677777 333 67888889976555 43222 2
Q ss_pred ccccc-cccccceeeecCCCCCeeEE----ccCCceEEEEe
Q 019258 306 FELLA-EPCAINSFDIDPQNPSDVIC----SLEWESIAIVS 341 (343)
Q Consensus 306 ~~~~~-~~~~i~s~~~~~~~~~~l~~----~~~~~~i~~~~ 341 (343)
..+.. ....+..++++++ ++.|+. ....+.|+.|+
T Consensus 399 ~~l~~~~~~~v~~~~~s~d-~~~l~~~~ss~~~P~~i~~~d 438 (741)
T 1yr2_A 399 GAVSLPGIGSASGLSGRPG-DRHAYLSFSSFTQPATVLALD 438 (741)
T ss_dssp EECBCSSSCEEEEEECCBT-CSCEEEEEEETTEEEEEEEEE
T ss_pred eeccCCCCeEEEEeecCCC-CCEEEEEEcCCCCCCEEEEEE
Confidence 22221 2456888899884 455552 23346777775
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.07 E-value=5.9e-07 Score=77.07 Aligned_cols=232 Identities=6% Similarity=-0.037 Sum_probs=147.4
Q ss_pred CCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceE
Q 019258 72 TRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEF 148 (343)
Q Consensus 72 ~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~ 148 (343)
..+.++.+. ++.++++...++.|.+|+.. .+... .... .+...+.++.+. +..+++...++.|..+|.. ++ .
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~-~ 94 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVP-TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG-F 94 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECS-STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-E
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECC-CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC-e
Confidence 467888888 66777776678999999877 33222 1111 233567888887 6666666668889999987 53 3
Q ss_pred EEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEE
Q 019258 149 KRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
...........+.++.+.+ +..+++...++.|..+|... .+..+.... .. ..+..++++|++. ++++.
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-----~~~~~~~~~-~~----~~~~~i~~d~~g~-l~v~~ 163 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADG-----TIYEYDLPN-KG----SYPAFITLGSDNA-LWFTE 163 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS-----CEEEEECSS-TT----CCEEEEEECTTSS-EEEEE
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCC-----CEEEccCCC-CC----CCceeEEECCCCC-EEEEe
Confidence 3332221223688999988 66666665588899988742 222332111 01 4588999999876 66666
Q ss_pred ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccc
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFE 307 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~ 307 (343)
..++.|..+|. .+... .+.. ..+...+..+++++++. ..++....+.|..++.......
T Consensus 164 ~~~~~i~~~~~-~g~~~-~~~~---------~~~~~~~~~i~~d~~g~----------l~v~~~~~~~i~~~~~~g~~~~ 222 (300)
T 2qc5_A 164 NQNNSIGRITN-TGKLE-EYPL---------PTNAAAPVGITSGNDGA----------LWFVEIMGNKIGRITTTGEISE 222 (300)
T ss_dssp TTTTEEEEECT-TCCEE-EEEC---------SSTTCCEEEEEECTTSS----------EEEEETTTTEEEEECTTCCEEE
T ss_pred cCCCeEEEECC-CCcEE-EeeC---------CCCCCCcceEEECCCCC----------EEEEccCCCEEEEEcCCCcEEE
Confidence 66789999998 33322 2220 22345688999998764 4445556678999987433322
Q ss_pred c-cc-cccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 308 L-LA-EPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 308 ~-~~-~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
. .. ....+.++.+++ +|...++...++.|+.++
T Consensus 223 ~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 223 YDIPTPNARPHAITAGK-NSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp EECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEC
T ss_pred EECCCCCCCceEEEECC-CCCEEEeccCCCeEEEEC
Confidence 2 11 124567899988 456666665567888775
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.04 E-value=2.3e-07 Score=80.44 Aligned_cols=243 Identities=9% Similarity=0.026 Sum_probs=142.4
Q ss_pred cceeeEEecCCCCCCCCeEEE-------EeecCCCCCCceeeeeCCCCCCCCCCcc---CCCCCCeeEEEcc-CCCeEEE
Q 019258 19 KYIDAVRWLPPLSPLSKLAVL-------AIYDTDADSPSLETHSISLPASLTPHSQ---WTPPTRISSLSTS-HQSLVAA 87 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t-------~s~D~~~~~~~l~~w~~~~~~~~~~~~~---~~~~~~v~~v~~~-~~~~l~~ 87 (343)
.....++|.| ++.++++ ++.++ .|..|+....... .+.. ..+...+.++.+. ++..|..
T Consensus 18 ~~~~~~~~~~----~g~l~~~~~~~~~~~~~~~-----~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v 87 (314)
T 1pjx_A 18 PGAEGPVFDK----NGDFYIVAPEVEVNGKPAG-----EILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFV 87 (314)
T ss_dssp TTCEEEEECT----TSCEEEEETTCEETTEECC-----EEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEE
T ss_pred CCccCceECC----CCCEEEEEeccccCCCCCC-----EEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEE
Confidence 4568899998 7778877 45553 3668876432211 1110 0133568899998 4145555
Q ss_pred EcCCCcEEEEEccCceeeee-eccC-CccccCeEEEEec--CCEEEEEeCC---------------CcEEEEECCCCceE
Q 019258 88 STLSGSLHVLSSAMQVLLSV-DENS-GFHVGPISGVDLT--GSECVSVGED---------------GRVNLVSVIGGGEF 148 (343)
Q Consensus 88 ~s~dg~v~v~~~~~~~~~~~-~~~~-~~h~~~v~~~~~~--~~~~~s~s~d---------------g~v~~wd~~~~~~~ 148 (343)
++..+.|.+|+.. .+.... .... ......+.++.+. +..+++...+ +.|..+|.. + ..
T Consensus 88 ~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~ 164 (314)
T 1pjx_A 88 ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G-QM 164 (314)
T ss_dssp EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S-CE
T ss_pred EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C-CE
Confidence 5555578888877 433222 2111 1122457888887 6666666554 567777765 4 23
Q ss_pred EEEEcCCCccceEEEEeC----C-CCE-EEEEeCCCcEEEEEccccCCCCCe--eEEecccCCCCCcccCeEEEEEcCCC
Q 019258 149 KRVYDGNGLVGFNCVKWA----S-PTE-FVTGGFGYGLQWWDLRRAGSGGPV--LQFKGNFGSQGKASGMIHSVDIHPSR 220 (343)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~----~-~~~-l~t~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~v~~~p~~ 220 (343)
........ ....++++ + ++. +++...++.|.+||+.. .+... ..+..... . .......+++++++
T Consensus 165 ~~~~~~~~--~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~--~g~~~~~~~~~~~~~-~--~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 165 IQVDTAFQ--FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG--PAKIENKKVWGHIPG-T--HEGGADGMDFDEDN 237 (314)
T ss_dssp EEEEEEES--SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEE--TTEEEEEEEEEECCC-C--SSCEEEEEEEBTTC
T ss_pred EEeccCCC--CcceEEEecccCCCCCEEEEEECCCCeEEEEECCC--CCccccceEEEECCC-C--CCCCCCceEECCCC
Confidence 33332222 36788888 8 334 44445689999999863 12211 11111110 0 00236789999987
Q ss_pred CeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEe
Q 019258 221 KHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVE 300 (343)
Q Consensus 221 ~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~ 300 (343)
. ++++...++.|.+||.++++....+. .+...+.+++|+|++.. ..++...++.|..++
T Consensus 238 ~-l~v~~~~~~~i~~~d~~~g~~~~~~~-----------~~~~~~~~i~~~~dg~~---------l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 238 N-LLVANWGSSHIEVFGPDGGQPKMRIR-----------CPFEKPSNLHFKPQTKT---------IFVTEHENNAVWKFE 296 (314)
T ss_dssp C-EEEEEETTTEEEEECTTCBSCSEEEE-----------CSSSCEEEEEECTTSSE---------EEEEETTTTEEEEEE
T ss_pred C-EEEEEcCCCEEEEEcCCCCcEeEEEe-----------CCCCCceeEEECCCCCE---------EEEEeCCCCeEEEEe
Confidence 4 66666678899999987543322222 23467899999988763 334445668899988
Q ss_pred cC
Q 019258 301 QG 302 (343)
Q Consensus 301 ~~ 302 (343)
..
T Consensus 297 ~~ 298 (314)
T 1pjx_A 297 WQ 298 (314)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.00 E-value=4.1e-07 Score=82.47 Aligned_cols=247 Identities=9% Similarity=-0.033 Sum_probs=151.0
Q ss_pred CeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCC--cEEEEECCCCce
Q 019258 73 RISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDG--RVNLVSVIGGGE 147 (343)
Q Consensus 73 ~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg--~v~~wd~~~~~~ 147 (343)
....|+|. ++.++++...++.|++|+........+... ...+. +.|+ ++.++.+..++ .|.+++...+..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~---~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG---FKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET---CCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc---CCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 56788888 666777777789999999875443333322 11222 6666 77888888766 788888876533
Q ss_pred EEEE--EcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEE
Q 019258 148 FKRV--YDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTC 224 (343)
Q Consensus 148 ~~~~--~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~ 224 (343)
.... ........+.+++++| ...|..+..++.|..||... .. ...+............|...++++|++..++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~---~~-~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKT---QE-VTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTT---CC-EEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCC---CC-EEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 2222 1121222578899999 77777777789999999876 32 3333111100000001123999999766788
Q ss_pred EEEecCCcEEEEEccCCceeeeeecCC----CCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-cCCeEEEE
Q 019258 225 LAGGSSGTVFAWDLRWQQQSIVLSGVG----TGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-EDGILAVV 299 (343)
Q Consensus 225 ~sg~~dg~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-~dg~i~~~ 299 (343)
++...++.|+.||.... ...+.+.. ..+.......-.....|+++|++. .+++-+ .+++|+.|
T Consensus 283 v~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~----------lyvad~~~~~~I~~~ 350 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN----------FYIVDGFKGYCLRKL 350 (409)
T ss_dssp EEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC----------EEEEETTTTCEEEEE
T ss_pred EEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC----------EEEEeCCCCCEEEEE
Confidence 88888999999997642 22222110 000000001123468999999876 566666 78899999
Q ss_pred ec-CCCccccccc---------------ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 300 EQ-GEEPFELLAE---------------PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 300 ~~-~~~~~~~~~~---------------~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+. ......+... -.....++++++ |...++-..+.+|+.+.
T Consensus 351 ~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 351 DILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp ETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEE
T ss_pred ECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEE
Confidence 94 3332222221 124678999984 78888888888888764
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.99 E-value=7.9e-07 Score=76.85 Aligned_cols=220 Identities=15% Similarity=0.009 Sum_probs=134.2
Q ss_pred eeEEEcc--CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEE
Q 019258 74 ISSLSTS--HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFK 149 (343)
Q Consensus 74 v~~v~~~--~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~ 149 (343)
..+..|+ ++.++++...++.|+.|+....... ... ....+.++.+. ++ ++.+. ++.|.+||..+++ ..
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~----~~~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~-~~ 86 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT----MDAPVSSVALRQSGG-YVATI-GTKFCALNWKEQS-AV 86 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE----CSSCEEEEEEBTTSS-EEEEE-TTEEEEEETTTTE-EE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe----CCCceEEEEECCCCC-EEEEE-CCeEEEEECCCCc-EE
Confidence 3466777 3456777777899999998754322 121 23578889988 55 44444 5679999998874 43
Q ss_pred EEEcC---CCccceEEEEeCC-CCEEEEEeC---------CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEE
Q 019258 150 RVYDG---NGLVGFNCVKWAS-PTEFVTGGF---------GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDI 216 (343)
Q Consensus 150 ~~~~~---~~~~~v~~~~~~~-~~~l~t~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~ 216 (343)
.+... .....+.++.+.+ +..+++... ...-.+|.+.. ...+..+.... ...+.++|
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~---~g~~~~~~~~~-------~~pngi~~ 156 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP---DHHVKKYFDQV-------DISNGLDW 156 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT---TSCEEEEEEEE-------SBEEEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC---CCCEEEEeecc-------ccccceEE
Confidence 33322 1222578899999 554444322 13346666544 22233322111 44689999
Q ss_pred cCCCCeEEEEEecCCcEEEEEcc--CCce--eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEec
Q 019258 217 HPSRKHTCLAGGSSGTVFAWDLR--WQQQ--SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSE 292 (343)
Q Consensus 217 ~p~~~~~~~sg~~dg~v~iwd~~--~~~~--~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~ 292 (343)
+|++..++++.+.++.|..||+. .+.. ...+.. ...+......+++++++. ..++...
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~--------~~~~~~~p~g~~~d~~G~----------lwva~~~ 218 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYK--------LEKEEQIPDGMCIDAEGK----------LWVACYN 218 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEE--------CCGGGCEEEEEEEBTTSC----------EEEEEET
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEE--------CCCCCCCCCeeEECCCCC----------EEEEEcC
Confidence 99998888888888999999973 3221 111110 012345678899998875 4556667
Q ss_pred CCeEEEEecC-CCcccccccc-cccceeeecCCCCCeeE
Q 019258 293 DGILAVVEQG-EEPFELLAEP-CAINSFDIDPQNPSDVI 329 (343)
Q Consensus 293 dg~i~~~~~~-~~~~~~~~~~-~~i~s~~~~~~~~~~l~ 329 (343)
++.|..|+.. .+....+..+ ..+.++++.+.+++.|.
T Consensus 219 ~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 219 GGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp TTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEE
T ss_pred CCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEE
Confidence 7889999985 3333333334 46788999832445443
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.94 E-value=2.2e-06 Score=75.19 Aligned_cols=219 Identities=10% Similarity=-0.043 Sum_probs=129.9
Q ss_pred eeEEEcc-C-CCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEE
Q 019258 74 ISSLSTS-H-QSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKR 150 (343)
Q Consensus 74 v~~v~~~-~-~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~ 150 (343)
..+..|+ + +.++++...++.|..|+....+... .. ....+.++.+. ...++.++.++ |.+||..+++ ...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~----~~~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~g~-~~~ 123 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA----LPFMGSALAKISDSKQLIASDDG-LFLRDTATGV-LTL 123 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE----CSSCEEEEEEEETTEEEEEETTE-EEEEETTTCC-EEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE----CCCcceEEEEeCCCeEEEEECCC-EEEEECCCCc-EEE
Confidence 3566777 3 4566777778999999987543222 11 23468888887 44444455554 9999998774 443
Q ss_pred EEcC---CCccceEEEEeCC-CCEEEEEeC------CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCC
Q 019258 151 VYDG---NGLVGFNCVKWAS-PTEFVTGGF------GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSR 220 (343)
Q Consensus 151 ~~~~---~~~~~v~~~~~~~-~~~l~t~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~ 220 (343)
+... .....+.++.+++ +..+++... .+.|..+| . ++ +..+.... .....++|+|++
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~---g~-~~~~~~~~-------~~~~~i~~s~dg 190 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K---GK-VTKLFADI-------SIPNSICFSPDG 190 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T---TE-EEEEEEEE-------SSEEEEEECTTS
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C---Cc-EEEeeCCC-------cccCCeEEcCCC
Confidence 3322 1122588999999 555444332 23444455 3 22 22222111 346789999999
Q ss_pred CeEEEEEecCCcEEEEEcc--CC-ce--eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCe
Q 019258 221 KHTCLAGGSSGTVFAWDLR--WQ-QQ--SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGI 295 (343)
Q Consensus 221 ~~~~~sg~~dg~v~iwd~~--~~-~~--~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~ 295 (343)
..++++.+.++.|.+||+. ++ .. ...+... .........+++++++. ..++...++.
T Consensus 191 ~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~--------~~~~~~p~gi~~d~~G~----------lwva~~~~~~ 252 (326)
T 2ghs_A 191 TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS--------TGIKGGMDGSVCDAEGH----------IWNARWGEGA 252 (326)
T ss_dssp CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC--------TTSSSEEEEEEECTTSC----------EEEEEETTTE
T ss_pred CEEEEEECCCCEEEEEEcccccCCcccCceEEEEC--------CCCCCCCCeeEECCCCC----------EEEEEeCCCE
Confidence 8777777778999999986 33 11 1111100 11234567888988775 4455556788
Q ss_pred EEEEecCCCcccccccc-cccceeeecCCCCCeeEE
Q 019258 296 LAVVEQGEEPFELLAEP-CAINSFDIDPQNPSDVIC 330 (343)
Q Consensus 296 i~~~~~~~~~~~~~~~~-~~i~s~~~~~~~~~~l~~ 330 (343)
|..|+...+....+..+ ..+.++++.+.+++.|..
T Consensus 253 v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~v 288 (326)
T 2ghs_A 253 VDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLV 288 (326)
T ss_dssp EEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEE
T ss_pred EEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEE
Confidence 99998754433333333 358899998324455533
No 207
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.93 E-value=3e-07 Score=86.75 Aligned_cols=192 Identities=11% Similarity=0.039 Sum_probs=129.9
Q ss_pred CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEcc--ccCCCCCeeEEeccc
Q 019258 125 GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLR--RAGSGGPVLQFKGNF 201 (343)
Q Consensus 125 ~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~--~~~~~~~~~~~~~~~ 201 (343)
+..+++...+++|.++|..+++ +...+.... .+..+.++| ++++++++.|+.|.+||+. + .+.+.++...
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~-v~~~i~~g~--~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t---~~~v~~i~~G- 239 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYE-IKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKE---PTTVAEIKIG- 239 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCC-EEEEEECSS--CEEEEEECTTSCEEEEEETTSEEEEEETTSSS---CCEEEEEECC-
T ss_pred ceEEEEeCCCCeEEEEECCCCe-EEEEEeCCC--CccceEECCCCCEEEEEcCCCeEEEEECCCCC---CcEeEEEecC-
Confidence 4567788889999999999985 444444333 477899999 7788888999999999996 4 4556666532
Q ss_pred CCCCCcccCeEEEEEc----CCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccc-cEEEEEEeecCCC
Q 019258 202 GSQGKASGMIHSVDIH----PSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSES-EVWEVQYDCHTKS 276 (343)
Q Consensus 202 ~~~~~~~~~i~~v~~~----p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~ 276 (343)
.....++++ |++.+++++...+++|.++|..+.+....+...+ ...-....|.. .+..+..+++++.
T Consensus 240 -------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~-~~~~~~~~~p~~rva~i~~s~~~~~ 311 (567)
T 1qks_A 240 -------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG-MTYDEQEYHPEPRVAAILASHYRPE 311 (567)
T ss_dssp -------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCE-ECTTTCCEESCCCEEEEEECSSSSE
T ss_pred -------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccc-cccccccccCCCceEEEEEcCCCCE
Confidence 236789999 6999888888888999999988754433332100 00000011222 5778888888776
Q ss_pred CcCCCCCccceEEEecCCeEEEEecCCCc-cc--ccccccccceeeecCCCCCeeEE-ccCCceEEEEe
Q 019258 277 SNISSSRVLPAMFCSEDGILAVVEQGEEP-FE--LLAEPCAINSFDIDPQNPSDVIC-SLEWESIAIVS 341 (343)
Q Consensus 277 ~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~--~~~~~~~i~s~~~~~~~~~~l~~-~~~~~~i~~~~ 341 (343)
++++..++|.|++++..... .. ..........+.|+| +|++++. ....+.|.+++
T Consensus 312 ---------~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD 370 (567)
T 1qks_A 312 ---------FIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDG-SHRYFITAANARNKLVVID 370 (567)
T ss_dssp ---------EEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEE
T ss_pred ---------EEEEecCCCeEEEEecCCCccceeeeeeccccccCceECC-CCCEEEEEeCCCCeEEEEE
Confidence 77788888999999975431 11 111123456788998 5576544 44567888775
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.92 E-value=1e-06 Score=76.11 Aligned_cols=225 Identities=12% Similarity=0.066 Sum_probs=132.0
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEE
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVL 97 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~ 97 (343)
.-.....|.| .++.++++...++ +|..|+..... ...+.....+.++.+. +++ |+++. ++.|.+|
T Consensus 13 ~~~Egp~w~~---~~~~l~~~d~~~~-----~i~~~d~~~~~----~~~~~~~~~~~~i~~~~dG~-l~v~~-~~~l~~~ 78 (297)
T 3g4e_A 13 RCGESPVWEE---VSNSLLFVDIPAK-----KVCRWDSFTKQ----VQRVTMDAPVSSVALRQSGG-YVATI-GTKFCAL 78 (297)
T ss_dssp SBEEEEEEET---TTTEEEEEETTTT-----EEEEEETTTCC----EEEEECSSCEEEEEEBTTSS-EEEEE-TTEEEEE
T ss_pred ccccCCeEEC---CCCEEEEEECCCC-----EEEEEECCCCc----EEEEeCCCceEEEEECCCCC-EEEEE-CCeEEEE
Confidence 4566889999 3456666655443 36678875422 1234456789999999 666 44444 5678899
Q ss_pred EccCceeeeeeccCC-ccccCeEEEEec--CCEEEEEeC---------CCcEEEEECCCCceEEEEEcCCCccceEEEEe
Q 019258 98 SSAMQVLLSVDENSG-FHVGPISGVDLT--GSECVSVGE---------DGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKW 165 (343)
Q Consensus 98 ~~~~~~~~~~~~~~~-~h~~~v~~~~~~--~~~~~s~s~---------dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 165 (343)
+....+...+..... .....++++.+. +..+++... ...-.+|.+.............. ....++|
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~--~pngi~~ 156 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVD--ISNGLDW 156 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEES--BEEEEEE
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccc--cccceEE
Confidence 987543322222111 122357788887 665554432 12345555543222333332222 4678999
Q ss_pred CC-CCEE-EEEeCCCcEEEEEccccCCCCCe--eEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCC
Q 019258 166 AS-PTEF-VTGGFGYGLQWWDLRRAGSGGPV--LQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQ 241 (343)
Q Consensus 166 ~~-~~~l-~t~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~ 241 (343)
++ ++.+ ++.+.++.|..||+... .+... ..+..... ..+....++++++| ++.++...++.|..||..++
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~-~G~~~~~~~~~~~~~----~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQ-TGQISNRRSVYKLEK----EEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTT-TCCEEEEEEEEECCG----GGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTC
T ss_pred cCCCCEEEEecCCCCcEEEEeccCC-CCcccCcEEEEECCC----CCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCc
Confidence 99 5544 55666899999997410 12211 11211110 01457889999998 56677777888999998765
Q ss_pred ceeeeeecCCCCcccccCCccccEEEEEEe-ecCCC
Q 019258 242 QQSIVLSGVGTGEAVTHSLSESEVWEVQYD-CHTKS 276 (343)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~ 276 (343)
+....+. .+...+.+++|. |+...
T Consensus 231 ~~~~~i~-----------~p~~~~t~~~f~g~d~~~ 255 (297)
T 3g4e_A 231 KRLQTVK-----------LPVDKTTSCCFGGKNYSE 255 (297)
T ss_dssp CEEEEEE-----------CSSSBEEEEEEESGGGCE
T ss_pred eEEEEEE-----------CCCCCceEEEEeCCCCCE
Confidence 5433332 234678999998 77663
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.84 E-value=8.6e-07 Score=86.03 Aligned_cols=241 Identities=9% Similarity=-0.052 Sum_probs=139.2
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCC-CeeEEEccCCCeEEEEcCCC-----
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPT-RISSLSTSHQSLVAASTLSG----- 92 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~-~v~~v~~~~~~~l~~~s~dg----- 92 (343)
..+..++|+| +++++|-+..........|++|++.+.... .. .... ....+.|++++.|+.++.+.
T Consensus 129 ~~l~~~~~Sp----Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~---~~-~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 129 TALDQLSFSR----DGRILAYSLSLAGSDWREIHLMDVESKQPL---ET-PLKDVKFSGISWLGNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp CEEEEEEECT----TSSEEEEEEECSSCCEEEEEEEETTTCSEE---EE-EEEEEESCCCEEETTTEEEEEESSCCC---
T ss_pred EEEEEEEECC----CCCEEEEEEecCCCceEEEEEEECCCCCCC---cc-ccCCceeccEEEeCCCEEEEEEecCccccc
Confidence 3588889999 888888554322111246889999654321 11 1111 13566777667777777664
Q ss_pred --------cEEEEEccCce--eeeeeccCCc-cccCeEEEEec--CCEEEE-Ee---CCCcEEEEECCCCc-eEEEEEcC
Q 019258 93 --------SLHVLSSAMQV--LLSVDENSGF-HVGPISGVDLT--GSECVS-VG---EDGRVNLVSVIGGG-EFKRVYDG 154 (343)
Q Consensus 93 --------~v~v~~~~~~~--~~~~~~~~~~-h~~~v~~~~~~--~~~~~s-~s---~dg~v~~wd~~~~~-~~~~~~~~ 154 (343)
.|++|++.... ...+... .. |.....++.++ ++.++. .+ .+..|.++|+.++. ....+...
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESC-SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEec-CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 38888887432 2233322 23 44456788888 666643 33 23589999997753 24444433
Q ss_pred CCccceEEEEeCC-CCEEE-EEeCC---CcEEEEEccccCCCCC--eeEEecccCCCCCcccCeEEEEEcCCCCeEEEEE
Q 019258 155 NGLVGFNCVKWAS-PTEFV-TGGFG---YGLQWWDLRRAGSGGP--VLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 155 ~~~~~v~~~~~~~-~~~l~-t~~~d---~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
.. ..... +.+ +..|+ ....+ +.|..+|+.. +.. ...+..+. ..+. .|+|++..++++.
T Consensus 280 ~~--~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~---~~~~~~~~l~~~~-------~~~~--~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 280 LD--ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN---PGPAHWRDLIPER-------QQVL--TVHSGSGYLFAEY 344 (693)
T ss_dssp SS--SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS---CCGGGCEEEECCC-------SSCE--EEEEETTEEEEEE
T ss_pred CC--ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC---CCccccEEEecCC-------CCEE--EEEEECCEEEEEE
Confidence 32 23333 333 44444 44433 6788999877 332 34455443 2233 7888888888777
Q ss_pred ecCC--cEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecC---CeEEEEecC
Q 019258 228 GSSG--TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSED---GILAVVEQG 302 (343)
Q Consensus 228 ~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~d---g~i~~~~~~ 302 (343)
..+| .|++||+... ....+. ....+.+..+.++|++.. .+++.+.. ++|+.|+..
T Consensus 345 ~~~g~~~l~~~d~~g~-~~~~l~----------~p~~~~~~~~~~~~d~~~---------l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 345 MVDATARVEQFDYEGK-RVREVA----------LPGLGSVSGFNGKHDDPA---------LYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp EETTEEEEEEECTTSC-EEEEEC----------CSSSSEEEECCCCTTCSC---------EEEEEECSSSCCEEEEECTT
T ss_pred EECCeeEEEEEECCCC-eeEEee----------cCCCceEEeeecCCCCCE---------EEEEecCCCCCCEEEEEECC
Confidence 7777 5888988743 222222 223456777777777663 33333322 678888864
Q ss_pred C
Q 019258 303 E 303 (343)
Q Consensus 303 ~ 303 (343)
.
T Consensus 405 ~ 405 (693)
T 3iuj_A 405 S 405 (693)
T ss_dssp T
T ss_pred C
Confidence 3
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.83 E-value=2.9e-06 Score=73.55 Aligned_cols=228 Identities=10% Similarity=-0.021 Sum_probs=137.9
Q ss_pred CCeeEEEcc-CCC-eEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCce
Q 019258 72 TRISSLSTS-HQS-LVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGE 147 (343)
Q Consensus 72 ~~v~~v~~~-~~~-~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~ 147 (343)
.......|. +++ ++++...++.|..|+.. .+ ..... .+...+.++.+. ++.+++...++.|..|+.+ ++
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~---~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~- 117 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLL---DATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ- 117 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEE---ESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEe---CCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC-
Confidence 345678887 566 67788888999999874 32 22221 234567888888 6655555566889999986 42
Q ss_pred EEEEEcC---CCccceEEEEeCC-CCEEEE----EeC-------------CCcEEEEEccccCCCCCeeEEecccCCCCC
Q 019258 148 FKRVYDG---NGLVGFNCVKWAS-PTEFVT----GGF-------------GYGLQWWDLRRAGSGGPVLQFKGNFGSQGK 206 (343)
Q Consensus 148 ~~~~~~~---~~~~~v~~~~~~~-~~~l~t----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 206 (343)
...+... .....+.++.+.+ +..+++ +.. .+.|..+|... ++ +..+. ..
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~---g~-~~~~~-~~----- 187 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG---SP-LQRMA-DL----- 187 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS---CC-CEEEE-EE-----
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCC---Cc-EEEEe-cC-----
Confidence 3333221 1112467788888 555554 322 25577777654 33 22222 11
Q ss_pred cccCeEEEEEcCCCCeEEEEEec-----CCcEEEEEccCCce--eeeeecCCCCcccccCCccccEEEEEEeecCCCCcC
Q 019258 207 ASGMIHSVDIHPSRKHTCLAGGS-----SGTVFAWDLRWQQQ--SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNI 279 (343)
Q Consensus 207 ~~~~i~~v~~~p~~~~~~~sg~~-----dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 279 (343)
...+.++|+|++..++++.+. ++.|..||+..... ...+. ....+....+++++++.
T Consensus 188 --~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~----------~~~~~~pdgi~~d~~G~---- 251 (305)
T 3dr2_A 188 --DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA----------SVPDGLPDGFCVDRGGW---- 251 (305)
T ss_dssp --SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEE----------CCSSSCCCSEEECTTSC----
T ss_pred --CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE----------ECCCCCCCeEEECCCCC----
Confidence 447889999998866655444 27899999875331 11111 11123345688888765
Q ss_pred CCCCccceEEEecCCeEEEEecCCCcccccccccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 280 SSSRVLPAMFCSEDGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 280 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
|+.+..+ .|.+|+...+....+..+..+.++.+.+ +++.|..++. +.++.++-
T Consensus 252 -------lwv~~~~-gv~~~~~~g~~~~~~~~~~~~~~~~f~~-d~~~L~it~~-~~l~~~~~ 304 (305)
T 3dr2_A 252 -------LWSSSGT-GVCVFDSDGQLLGHIPTPGTASNCTFDQ-AQQRLFITGG-PCLWMLPL 304 (305)
T ss_dssp -------EEECCSS-EEEEECTTSCEEEEEECSSCCCEEEECT-TSCEEEEEET-TEEEEEEC
T ss_pred -------EEEecCC-cEEEECCCCCEEEEEECCCceeEEEEeC-CCCEEEEEcC-CeEEEEEC
Confidence 4555544 4899998655544444455688888886 4566666654 46776654
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.81 E-value=2.1e-06 Score=76.54 Aligned_cols=252 Identities=11% Similarity=-0.020 Sum_probs=150.9
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEee-cC------CCCCCceeeeeCCCCCCCCCCccCCC--------CCCee
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIY-DT------DADSPSLETHSISLPASLTPHSQWTP--------PTRIS 75 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~-D~------~~~~~~l~~w~~~~~~~~~~~~~~~~--------~~~v~ 75 (343)
.+.+++.+.... |+.+| +++++..++. .. ..+ .+.+||..... ....+.. .....
T Consensus 71 v~~~I~vG~~P~-va~sp----DG~~lyVan~~~~r~~~G~~~~--~VsviD~~t~~---v~~~I~v~~g~r~~~g~~P~ 140 (386)
T 3sjl_D 71 VIGMIDGGFLPN-PVVAD----DGSFIAHASTVFSRIARGERTD--YVEVFDPVTLL---PTADIELPDAPRFLVGTYPW 140 (386)
T ss_dssp EEEEEEECSSCE-EEECT----TSSCEEEEEEEEEETTEEEEEE--EEEEECTTTCC---EEEEEEETTCCCCCBSCCGG
T ss_pred EEEEEECCCCCc-EEECC----CCCEEEEEcccccccccCCCCC--EEEEEECCCCe---EEEEEECCCccccccCCCCc
Confidence 455566555555 89999 7776655542 10 001 36789985522 2222221 12466
Q ss_pred EEEcc-CCCeEEEEcC--CCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCC-CceEEE
Q 019258 76 SLSTS-HQSLVAASTL--SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIG-GGEFKR 150 (343)
Q Consensus 76 ~v~~~-~~~~l~~~s~--dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~-~~~~~~ 150 (343)
.+.|+ ++++|+++.. ++.|.++|+...+.+...... .+..+.-. ...+++.+.||++.+.++.+ ++ +..
T Consensus 141 ~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-----g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~-v~~ 214 (386)
T 3sjl_D 141 MTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-----DCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGT-PEI 214 (386)
T ss_dssp GEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-----SEEEEEEEETTEEEEEETTSCEEEEECCSSSC-CEE
T ss_pred eEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-----CcceeecCCCceeEEECCCCCEEEEECCCCCe-EEE
Confidence 78999 8888888764 689999999876655444321 12222222 67888999999999999976 43 322
Q ss_pred EEcCC---CccceE-EEEeCC-CCEEEEEeCCCcEEEEEccccCCCC--CeeEEe--cc-cCCCCCcccCeEEEEEcCCC
Q 019258 151 VYDGN---GLVGFN-CVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGG--PVLQFK--GN-FGSQGKASGMIHSVDIHPSR 220 (343)
Q Consensus 151 ~~~~~---~~~~v~-~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~--~~~~~~--~~-~~~~~~~~~~i~~v~~~p~~ 220 (343)
..... ....+. ...|.+ ...++..+.+++|.+.|+.. .. .+..+. .. .-..+...+....++++|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~---~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 215 THTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS---GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTT---SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred eecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCC---CcceeecceeccccccccccccCCCcceeeECCCC
Confidence 11111 111221 235543 55666688899999999976 22 111121 00 00011112334567778988
Q ss_pred CeEEEEEec---------CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEE-E
Q 019258 221 KHTCLAGGS---------SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMF-C 290 (343)
Q Consensus 221 ~~~~~sg~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s-~ 290 (343)
..++++-.. ...|.++|+++.+....+. -...++.|+++|++.. .|++ .
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~------------vg~~~~~lavs~D~~~---------~ly~tn 350 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE------------MGHEIDSINVSQDEKP---------LLYALS 350 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE------------EEEEECEEEECSSSSC---------EEEEEE
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE------------CCCCcceEEECCCCCe---------EEEEEc
Confidence 877766432 2469999999865544443 2347889999999863 4555 4
Q ss_pred ecCCeEEEEecC
Q 019258 291 SEDGILAVVEQG 302 (343)
Q Consensus 291 s~dg~i~~~~~~ 302 (343)
..++.|.++|..
T Consensus 351 ~~~~~VsViD~~ 362 (386)
T 3sjl_D 351 TGDKTLYIHDAE 362 (386)
T ss_dssp TTTTEEEEEETT
T ss_pred CCCCeEEEEECC
Confidence 668999999975
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.76 E-value=2.1e-05 Score=70.31 Aligned_cols=254 Identities=10% Similarity=-0.053 Sum_probs=143.9
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeec-CCC----CCCceeeeeCCCCCCCCCCccCCC--------CCCeeEE
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYD-TDA----DSPSLETHSISLPASLTPHSQWTP--------PTRISSL 77 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D-~~~----~~~~l~~w~~~~~~~~~~~~~~~~--------~~~v~~v 77 (343)
.+.+++.+..- .++++| +++++..+... ... ..-.+.++|... .+....+.. ......+
T Consensus 59 ~~~~i~~g~~p-~i~~sp----Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t---~~~~~~i~~~~~~~~~~g~~p~~~ 130 (373)
T 2mad_H 59 ILGHVNGGFLP-NPVAAH----SGSEFALASTSFSRIAKGKRTDYVEVFDPVT---FLPIADIELPDAPRFDVGPYSWMN 130 (373)
T ss_pred EEEEecCCCCC-CeEECC----CCCEEEEEeccccccccCCCCCeEEEEECCC---CcEEEEEECCCccccccCCCccce
Confidence 44556655555 888998 78777766421 000 011356788743 111222111 1234578
Q ss_pred Ecc-CCCeEEEEcC--CCcEEEEEccCceeeee-eccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEE
Q 019258 78 STS-HQSLVAASTL--SGSLHVLSSAMQVLLSV-DENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVY 152 (343)
Q Consensus 78 ~~~-~~~~l~~~s~--dg~v~v~~~~~~~~~~~-~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~ 152 (343)
.++ ++++|+++.. ++.|.++| ...+.+.. ... ..+..+... ...+++.+.||.+.++|. +++......
T Consensus 131 ~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~ 203 (373)
T 2mad_H 131 ANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-----PTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGL 203 (373)
T ss_pred EECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-----CceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEe
Confidence 888 8888888874 57899999 76554433 221 111122222 567788889999999999 764332211
Q ss_pred c---CCCccce-EEEEeCC-CCEEEEEeCCCcEEEEEccccCCC-CCeeEEecccC---CCCCcccCeEEEEEcCCCCeE
Q 019258 153 D---GNGLVGF-NCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSG-GPVLQFKGNFG---SQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 153 ~---~~~~~~v-~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~---~~~~~~~~i~~v~~~p~~~~~ 223 (343)
. ......+ ....+.+ ...++..+..+.+.+.|+.. .. ..+..+..... ..+........+.++|++..+
T Consensus 204 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~--~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~l 281 (373)
T 2mad_H 204 VGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISA--AGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGI 281 (373)
T ss_pred ccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccC--CcceEeeeeeecCCcccccceecCceEeEEECCCCCEE
Confidence 0 0111011 2233444 44444455788999999865 11 11122221100 011111334557899998877
Q ss_pred EEEEe---------cCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-cC
Q 019258 224 CLAGG---------SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-ED 293 (343)
Q Consensus 224 ~~sg~---------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-~d 293 (343)
+++.. .++.|.++|+.+.+....+. -....+.+.|+|++.. .++++. .+
T Consensus 282 yV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~------------~g~~p~~i~~s~Dg~~---------~l~v~~~~~ 340 (373)
T 2mad_H 282 YLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS------------LGHDVDAISVAQDGGP---------DLYALSAGT 340 (373)
T ss_pred EEEeccCCcccccCCCCeEEEEECCCCEEEEEEE------------CCCCcCeEEECCCCCe---------EEEEEcCCC
Confidence 76543 23579999998855444443 1235789999999884 566766 58
Q ss_pred CeEEEEecC
Q 019258 294 GILAVVEQG 302 (343)
Q Consensus 294 g~i~~~~~~ 302 (343)
+.|.++|..
T Consensus 341 ~~V~ViD~~ 349 (373)
T 2mad_H 341 EVLHIYDAG 349 (373)
T ss_pred CeEEEEECC
Confidence 999999975
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.76 E-value=2.6e-06 Score=77.23 Aligned_cols=198 Identities=13% Similarity=0.000 Sum_probs=125.2
Q ss_pred cCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCC--cEEEEEccccCC
Q 019258 116 GPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGY--GLQWWDLRRAGS 190 (343)
Q Consensus 116 ~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~--~i~iwd~~~~~~ 190 (343)
.....++++ ++.+++...++.|+.||..++ .+..+...... .. ++|++ .+.++.+..++ .|..+|...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g-~~~~~~~~~~~--~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~--- 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN-KVTTVHPGFKG--GK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS--- 203 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT-EEEEEEETCCB--CB-CEECTTSSEEEEEBSSTTCEEEEEEGGG---
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC-EEEEeeccCCC--Cc-eeEecCCCcEEEEecCCCceEEEEEcCC---
Confidence 356788887 566666667799999999887 35555444332 33 88999 66777777755 788888876
Q ss_pred CCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccE--EEE
Q 019258 191 GGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEV--WEV 268 (343)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~v 268 (343)
......+..... .. .....+++++|++..+++ +..++.|+.||....... .+.... ...+...- ..+
T Consensus 204 ~~~~~~~g~~~~-~~--~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~-~~~~~~------~~g~~~~~P~~~i 272 (409)
T 3hrp_A 204 GWAPTRIGQLGS-TF--SGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVT-LIKQLE------LSGSLGTNPGPYL 272 (409)
T ss_dssp TTCEEEEEECCT-TS--CSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEE-EEEECC------CCSCCCCSSCCEE
T ss_pred CceeEEeeeccc-hh--cCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEE-EEeccc------ccCCCCCCccccE
Confidence 333333311000 00 045788999996556665 566889999998765422 221000 01111222 389
Q ss_pred EEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcccccccc---------------cccceeeecCCCCCeeEEcc-
Q 019258 269 QYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAEP---------------CAINSFDIDPQNPSDVICSL- 332 (343)
Q Consensus 269 ~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~---------------~~i~s~~~~~~~~~~l~~~~- 332 (343)
+|+|++.. .+++-+.+++|+.|+.......+.... ...+.+++++ +|...++-.
T Consensus 273 a~~p~~g~---------lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~ 342 (409)
T 3hrp_A 273 IYYFVDSN---------FYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGF 342 (409)
T ss_dssp EEETTTTE---------EEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETT
T ss_pred EEeCCCCE---------EEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCC
Confidence 99996553 556667788999998764432222211 2367899998 567778877
Q ss_pred CCceEEEEe
Q 019258 333 EWESIAIVS 341 (343)
Q Consensus 333 ~~~~i~~~~ 341 (343)
.+..|+.++
T Consensus 343 ~~~~I~~~~ 351 (409)
T 3hrp_A 343 KGYCLRKLD 351 (409)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
Confidence 788888886
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.72 E-value=8.8e-06 Score=71.25 Aligned_cols=217 Identities=13% Similarity=0.068 Sum_probs=125.3
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEE
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLS 98 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~ 98 (343)
-.....|+| ..+.++++...++ .|..|+..... ...+..+..+.++.+. ++.+++ ++.+| |.+|+
T Consensus 50 ~~egp~~~~---~~~~l~~~d~~~~-----~i~~~d~~~~~----~~~~~~~~~v~~i~~~~dg~l~v-~~~~g-l~~~d 115 (326)
T 2ghs_A 50 LGEGPTFDP---ASGTAWWFNILER-----ELHELHLASGR----KTVHALPFMGSALAKISDSKQLI-ASDDG-LFLRD 115 (326)
T ss_dssp BEEEEEEET---TTTEEEEEEGGGT-----EEEEEETTTTE----EEEEECSSCEEEEEEEETTEEEE-EETTE-EEEEE
T ss_pred CCcCCeEeC---CCCEEEEEECCCC-----EEEEEECCCCc----EEEEECCCcceEEEEeCCCeEEE-EECCC-EEEEE
Confidence 457789999 3356666665553 36678775422 1123345679999998 555555 44444 88888
Q ss_pred ccCceeeeeeccCC-ccccCeEEEEec--CCEEEEEeC------CCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-C
Q 019258 99 SAMQVLLSVDENSG-FHVGPISGVDLT--GSECVSVGE------DGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-P 168 (343)
Q Consensus 99 ~~~~~~~~~~~~~~-~h~~~v~~~~~~--~~~~~s~s~------dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 168 (343)
....+...+..... .....++++.++ +..+++... .+.|..++ ++ .......... ....++|++ +
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g-~~~~~~~~~~--~~~~i~~s~dg 190 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG-KVTKLFADIS--IPNSICFSPDG 190 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT-EEEEEEEEES--SEEEEEECTTS
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC-cEEEeeCCCc--ccCCeEEcCCC
Confidence 76444322222111 112357888888 666555432 24455555 44 3443332222 467899998 5
Q ss_pred CEE-EEEeCCCcEEEEEcc--ccCCC-CC--eeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCc
Q 019258 169 TEF-VTGGFGYGLQWWDLR--RAGSG-GP--VLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ 242 (343)
Q Consensus 169 ~~l-~t~~~d~~i~iwd~~--~~~~~-~~--~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~ 242 (343)
+.+ ++.+.++.|.+||+. . + .. ...+....... .....+++++++. +.++...++.|..||.. ++
T Consensus 191 ~~lyv~~~~~~~I~~~d~~~~~---Gl~~~~~~~~~~~~~~~----~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~-g~ 261 (326)
T 2ghs_A 191 TTGYFVDTKVNRLMRVPLDART---GLPTGKAEVFIDSTGIK----GGMDGSVCDAEGH-IWNARWGEGAVDRYDTD-GN 261 (326)
T ss_dssp CEEEEEETTTCEEEEEEBCTTT---CCBSSCCEEEEECTTSS----SEEEEEEECTTSC-EEEEEETTTEEEEECTT-CC
T ss_pred CEEEEEECCCCEEEEEEccccc---CCcccCceEEEECCCCC----CCCCeeEECCCCC-EEEEEeCCCEEEEECCC-CC
Confidence 444 455567899999986 3 2 11 11222111001 4467899999885 55555567899999983 33
Q ss_pred eeeeeecCCCCcccccCCccccEEEEEEe-ecCC
Q 019258 243 QSIVLSGVGTGEAVTHSLSESEVWEVQYD-CHTK 275 (343)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-p~~~ 275 (343)
.... . ..+...+.+++|. |++.
T Consensus 262 ~~~~-i----------~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 262 HIAR-Y----------EVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp EEEE-E----------ECSCSBEEEEEEESTTSC
T ss_pred EEEE-E----------ECCCCCcEEEEEecCCCC
Confidence 3222 2 2234568999998 7665
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.66 E-value=4e-06 Score=81.30 Aligned_cols=235 Identities=13% Similarity=0.061 Sum_probs=135.7
Q ss_pred CCCCeeEEEcc-CCCeEEEEc-----CCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCc------
Q 019258 70 PPTRISSLSTS-HQSLVAAST-----LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGR------ 136 (343)
Q Consensus 70 ~~~~v~~v~~~-~~~~l~~~s-----~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~------ 136 (343)
+...+..+.|+ ++++|+-+. ....|+++|+.+++.+.... +......+.|+ ++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~----~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL----KDVKFSGISWLGNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE----EEEESCCCEEETTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc----CCceeccEEEeCCCEEEEEEecCccccccc
Confidence 33468888999 777776433 22478999998665433210 11112345565 888888877743
Q ss_pred -------EEEEECCCCce-EEEEEcCCC--ccceEEEEeCC-CCEEE-EEeC---CCcEEEEEccccCCCCCeeEEeccc
Q 019258 137 -------VNLVSVIGGGE-FKRVYDGNG--LVGFNCVKWAS-PTEFV-TGGF---GYGLQWWDLRRAGSGGPVLQFKGNF 201 (343)
Q Consensus 137 -------v~~wd~~~~~~-~~~~~~~~~--~~~v~~~~~~~-~~~l~-t~~~---d~~i~iwd~~~~~~~~~~~~~~~~~ 201 (343)
|.+|++.++.. -..++.... ...+..+.|++ +..++ +.+. ++.|.++|+.. +...+..+....
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~--~~~~~~~l~~~~ 280 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ--ENAPLLTVQGDL 280 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS--TTCCCEEEECSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC--CCCceEEEeCCC
Confidence 99999977531 233443322 21367889999 55553 3332 35899999977 223455555443
Q ss_pred CCCCCcccCeEEEEEcCCCCeEEEEEecC---CcEEEEEccCCce--eeeeecCCCCcccccCCccccEEEEEEeecCCC
Q 019258 202 GSQGKASGMIHSVDIHPSRKHTCLAGGSS---GTVFAWDLRWQQQ--SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKS 276 (343)
Q Consensus 202 ~~~~~~~~~i~~v~~~p~~~~~~~sg~~d---g~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 276 (343)
...... +.+++..+++....+ +.|..+|+..+.. ...+. .|...+. .|++++..
T Consensus 281 -------~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-----------~~~~~~~--~~s~~g~~ 339 (693)
T 3iuj_A 281 -------DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-----------PERQQVL--TVHSGSGY 339 (693)
T ss_dssp -------SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-----------CCCSSCE--EEEEETTE
T ss_pred -------CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe-----------cCCCCEE--EEEEECCE
Confidence 223333 556666676666554 6799999987532 12222 2444444 88888874
Q ss_pred CcCCCCCccceEEEecCC--eEEEEecCCCcccccc--cccccceeeecCCCCCeeEEccCC----ceEEEEe
Q 019258 277 SNISSSRVLPAMFCSEDG--ILAVVEQGEEPFELLA--EPCAINSFDIDPQNPSDVICSLEW----ESIAIVS 341 (343)
Q Consensus 277 ~~~~~~~~~~l~s~s~dg--~i~~~~~~~~~~~~~~--~~~~i~s~~~~~~~~~~l~~~~~~----~~i~~~~ 341 (343)
.+++...+| .|++|+........+. ....+..+.++++. +.++....+ +.++.++
T Consensus 340 ---------lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~-~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 340 ---------LFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDD-PALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp ---------EEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTC-SCEEEEEECSSSCCEEEEEC
T ss_pred ---------EEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCC-CEEEEEecCCCCCCEEEEEE
Confidence 344445565 5788876533222222 23456677777643 444444332 5676664
No 216
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.63 E-value=2.7e-05 Score=69.33 Aligned_cols=221 Identities=13% Similarity=0.045 Sum_probs=129.4
Q ss_pred CCeEEEEcCCCcEEEEEccCceeeeeeccCCcc--ccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc--
Q 019258 82 QSLVAASTLSGSLHVLSSAMQVLLSVDENSGFH--VGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL-- 157 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~-- 157 (343)
++.+++++.++.+..+|..+++.+-........ ..........+..++.+..++.|..+|..+++...........
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~ 222 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGS 222 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC----
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCC
Confidence 568888999999999998765544222211000 0000112222677888888999999999988543333221110
Q ss_pred c---ceEEEEeCC---CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC
Q 019258 158 V---GFNCVKWAS---PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG 231 (343)
Q Consensus 158 ~---~v~~~~~~~---~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg 231 (343)
. .+..+...| .+.+..++.++.+..+|.++ ++.+..... .....+... +.. +..++.+|
T Consensus 223 ~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t---G~~~w~~~~---------~~~~~~~~~--~~~-l~~~~~~g 287 (376)
T 3q7m_A 223 TEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS---GQIMWKREL---------GSVNDFIVD--GNR-IYLVDQND 287 (376)
T ss_dssp -------CCCCCCEEETTEEEEECTTSCEEEEETTT---CCEEEEECC---------CCEEEEEEE--TTE-EEEEETTC
T ss_pred cccccccccCCCcEEECCEEEEEecCcEEEEEECCC---CcEEeeccC---------CCCCCceEE--CCE-EEEEcCCC
Confidence 0 000111122 56788888899999999988 666555431 223444443 334 45678899
Q ss_pred cEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-cccccc
Q 019258 232 TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFELLA 310 (343)
Q Consensus 232 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~~~ 310 (343)
.+..+|.++++....... .....+...... +. .|+.++.+|.|+.++.... ..+...
T Consensus 288 ~l~~~d~~tG~~~w~~~~----------~~~~~~~~~~~~--~~----------~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 288 RVMALTIDGGVTLWTQSD----------LLHRLLTSPVLY--NG----------NLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp CEEEEETTTCCEEEEECT----------TTTSCCCCCEEE--TT----------EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCcEEEeecc----------cCCCcccCCEEE--CC----------EEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 999999988765444331 111122222222 23 6888999999999996533 323222
Q ss_pred c-cccc-ceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 311 E-PCAI-NSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 311 ~-~~~i-~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
. ...+ .+..+.. ..|+.++.++.++.+++
T Consensus 346 ~~~~~~~~~~~~~~---~~l~v~~~~G~l~~~~~ 376 (376)
T 3q7m_A 346 VDSSGFQTEPVAAD---GKLLIQAKDGTVYSITR 376 (376)
T ss_dssp CCTTCBCSCCEEET---TEEEEEBTTSCEEEEEC
T ss_pred cCCCcceeCCEEEC---CEEEEEeCCCEEEEEeC
Confidence 2 2222 3333343 67888888999999875
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.60 E-value=0.00028 Score=62.90 Aligned_cols=263 Identities=11% Similarity=-0.027 Sum_probs=144.6
Q ss_pred ceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEc----------CCCcEEEEEccCceeeeeeccC-Cc---c
Q 019258 50 SLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAAST----------LSGSLHVLSSAMQVLLSVDENS-GF---H 114 (343)
Q Consensus 50 ~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s----------~dg~v~v~~~~~~~~~~~~~~~-~~---h 114 (343)
.+.++|.... +.+..++....- .+.++ +++.|+++. .++.|.+||....+.+...... .. +
T Consensus 48 ~v~v~D~~t~---~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~ 123 (373)
T 2mad_H 48 QQWVLDAGSG---SILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV 123 (373)
T ss_pred EEEEEECCCC---eEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc
Confidence 4668887542 223334433333 89999 888888875 3678999998754443322211 00 0
Q ss_pred ccCeEEEEec--CCEEEEEeC--CCcEEEEECCCCceEEEE-EcCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEccc
Q 019258 115 VGPISGVDLT--GSECVSVGE--DGRVNLVSVIGGGEFKRV-YDGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRR 187 (343)
Q Consensus 115 ~~~v~~~~~~--~~~~~s~s~--dg~v~~wd~~~~~~~~~~-~~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~ 187 (343)
...-..+.++ +++++.+.. ++.|.++| .+++ .... +.... ++.+.+ ...+++.+.||.+.++|. .
T Consensus 124 g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~-~~~~~i~~~~-----~~~~~~~~~~~~~~~~~dg~~~~vd~-~ 195 (373)
T 2mad_H 124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS-SDDQLLSSPT-----CYHIHPGAPSTFYLLCAQGGLAKTDH-A 195 (373)
T ss_pred CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC-EEeEEcCCCc-----eEEEEeCCCceEEEEcCCCCEEEEEC-C
Confidence 1123467776 888887764 57899999 8885 4443 43222 123333 556778888999999999 7
Q ss_pred cCCCCCeeEEecccCCCCCcccC-eEEEEEcCCCCeEEEEEecCCcEEEEEccCCceee-eeecCCCCcccccCCccccE
Q 019258 188 AGSGGPVLQFKGNFGSQGKASGM-IHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSI-VLSGVGTGEAVTHSLSESEV 265 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~-i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~h~~~v 265 (343)
++............ ...+ .....+.+++..+++. +.++.+.+.|+....... ....................
T Consensus 196 ---g~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~ 269 (373)
T 2mad_H 196 ---GGAAGAGLVGAMLT--AAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGW 269 (373)
T ss_pred ---CcEEEEEecccccc--CCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCce
Confidence 45442221000000 0022 1234455555555444 367899999986532111 11100000000000012334
Q ss_pred EEEEEeecCCCCcCCCCCccceEEEec----------CCeEEEEecCC-CcccccccccccceeeecCCCCC-eeEEcc-
Q 019258 266 WEVQYDCHTKSSNISSSRVLPAMFCSE----------DGILAVVEQGE-EPFELLAEPCAINSFDIDPQNPS-DVICSL- 332 (343)
Q Consensus 266 ~~v~~~p~~~~~~~~~~~~~~l~s~s~----------dg~i~~~~~~~-~~~~~~~~~~~i~s~~~~~~~~~-~l~~~~- 332 (343)
..+.++|++. .++.+.. ++.|.++|... +....+.-.....++.+++ +|+ .++.+.
T Consensus 270 ~~~~~s~d~~----------~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~-Dg~~~l~v~~~ 338 (373)
T 2mad_H 270 QQVAYLKSSD----------GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQ-DGGPDLYALSA 338 (373)
T ss_pred EeEEECCCCC----------EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECC-CCCeEEEEEcC
Confidence 4577888876 4454432 35799988753 2323333345689999999 456 566655
Q ss_pred CCceEEEEe
Q 019258 333 EWESIAIVS 341 (343)
Q Consensus 333 ~~~~i~~~~ 341 (343)
.++.|.+++
T Consensus 339 ~~~~V~ViD 347 (373)
T 2mad_H 339 GTEVLHIYD 347 (373)
T ss_pred CCCeEEEEE
Confidence 478888875
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.58 E-value=1.6e-05 Score=70.17 Aligned_cols=235 Identities=8% Similarity=-0.036 Sum_probs=132.2
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEee-cCCCCCCceeeeeCCCCCCCCCCc-----cCCCCCCeeEEEcc-CCC
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIY-DTDADSPSLETHSISLPASLTPHS-----QWTPPTRISSLSTS-HQS 83 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~-D~~~~~~~l~~w~~~~~~~~~~~~-----~~~~~~~v~~v~~~-~~~ 83 (343)
.+..+. ..+..|+.+| +++.|++... ++. .++ +|.+.+ .....+. ...+-..+.++++. ++.
T Consensus 11 ~v~~~~--~~p~~va~~~----~g~~~v~~~~~~~~--~~~--l~~~~~-g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~ 79 (343)
T 2qe8_A 11 VVAELS--LAPGNITLTP----DGRLFLSLHQFYQP--EMQ--VAELTQ-DGLIPFPPQSGNAIITFDTVLGIKSDGNGI 79 (343)
T ss_dssp EEEEES--SCEEEEEECT----TSCEEEEECGGGCC--SCS--EEEEET-TEEEESCCCCSSCCCCCSCEEEEEECSSSE
T ss_pred EEEEcC--CCcceEEECC----CCCEEEEeCCCCCC--ceE--EEEECC-CCeecCCCcccCcccceeEeeEEEEcCCCc
Confidence 344444 5788999999 8889988643 221 133 555431 1111110 11234578999998 555
Q ss_pred eEEEEcC-----CCcEEEEEccCceeeeeecc---CCccccCeEEEEec--CCE-EEEEe---CCCcEEEEECCCCceEE
Q 019258 84 LVAASTL-----SGSLHVLSSAMQVLLSVDEN---SGFHVGPISGVDLT--GSE-CVSVG---EDGRVNLVSVIGGGEFK 149 (343)
Q Consensus 84 ~l~~~s~-----dg~v~v~~~~~~~~~~~~~~---~~~h~~~v~~~~~~--~~~-~~s~s---~dg~v~~wd~~~~~~~~ 149 (343)
++++-.. ++.|.+||+.+++.+..... ...+......+.+. +.. +++-. .++.|.+||+.+++ ..
T Consensus 80 L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-~~ 158 (343)
T 2qe8_A 80 VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-AA 158 (343)
T ss_dssp EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-EE
T ss_pred EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-EE
Confidence 5554433 57899999876553332221 11233456788887 344 45555 67899999998774 44
Q ss_pred EEEcCCC----------------------------ccceEEEEeCC-CCEEEEEeCCC-cEEEEEccccCCCCC-----e
Q 019258 150 RVYDGNG----------------------------LVGFNCVKWAS-PTEFVTGGFGY-GLQWWDLRRAGSGGP-----V 194 (343)
Q Consensus 150 ~~~~~~~----------------------------~~~v~~~~~~~-~~~l~t~~~d~-~i~iwd~~~~~~~~~-----~ 194 (343)
+....+. ...+..+++++ +..|..+..++ .|..+|...-..+.. .
T Consensus 159 r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 159 RVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp EECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred EEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 4443210 01357899999 55666666554 444444321000000 0
Q ss_pred e--EEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEee
Q 019258 195 L--QFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDC 272 (343)
Q Consensus 195 ~--~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 272 (343)
. ...+.. +....+++++++ .++++...++.|.+||...++. ..+.. ..+.....+++|.+
T Consensus 239 ~~~~~~g~~-------g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~-~~~~~---------~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 239 SKIERYSEK-------PICDGISIDKDH-NIYVGDLAHSAIGVITSADRAY-KLLVT---------DEKLSWTDSFNFGS 300 (343)
T ss_dssp TTCEEEEEC-------CSCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEE-EEEEE---------CGGGSCEEEEEECT
T ss_pred cceEecccC-------CCCceEEECCCC-CEEEEccCCCeEEEEECCCCCE-EEEEE---------CCceecCCeeEECC
Confidence 0 111111 345678999987 5777888899999999844332 22220 11234577888887
Q ss_pred cCC
Q 019258 273 HTK 275 (343)
Q Consensus 273 ~~~ 275 (343)
++.
T Consensus 301 ~g~ 303 (343)
T 2qe8_A 301 DGY 303 (343)
T ss_dssp TSC
T ss_pred CCc
Confidence 654
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.56 E-value=1.3e-05 Score=69.31 Aligned_cols=225 Identities=8% Similarity=0.027 Sum_probs=128.2
Q ss_pred ccceeeEEecCCCCCCCC-eEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCCCcEE
Q 019258 18 SKYIDAVRWLPPLSPLSK-LAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAASTLSGSLH 95 (343)
Q Consensus 18 ~~~i~~v~w~p~~~~~~~-~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~ 95 (343)
........|.| +++ +++++..++ .|..|+.... .. ......+.+..+.+. +++++++...++.|.
T Consensus 44 ~~~~egp~~~~----~g~~l~~~d~~~~-----~i~~~~~~g~--~~--~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 44 ATWSEGPAWWE----AQRTLVWSDLVGR-----RVLGWREDGT--VD--VLLDATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp CSSEEEEEEEG----GGTEEEEEETTTT-----EEEEEETTSC--EE--EEEESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CcCccCCeEeC----CCCEEEEEECCCC-----EEEEEeCCCC--EE--EEeCCCCccceeeECCCCCEEEEECCCCEEE
Confidence 34567889999 666 555654443 3667776321 11 111234568899998 666666555668899
Q ss_pred EEEccCceeeeeec-cCCccccCeEEEEec--CCEEEE----EeC-------------CCcEEEEECCCCceEEEEEcCC
Q 019258 96 VLSSAMQVLLSVDE-NSGFHVGPISGVDLT--GSECVS----VGE-------------DGRVNLVSVIGGGEFKRVYDGN 155 (343)
Q Consensus 96 v~~~~~~~~~~~~~-~~~~h~~~v~~~~~~--~~~~~s----~s~-------------dg~v~~wd~~~~~~~~~~~~~~ 155 (343)
+|+.. ++...+.. ........++++.+. +..+++ +.. .+.|..+|..+++ ..... ..
T Consensus 111 ~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-~~~~~-~~ 187 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-LQRMA-DL 187 (305)
T ss_dssp EECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-CEEEE-EE
T ss_pred EECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-EEEEe-cC
Confidence 99875 22221111 111112345677777 666665 321 2457777776553 33332 22
Q ss_pred CccceEEEEeCC-CCEEEEEeCC------CcEEEEEccccCCCCCeeEEecc-cCCCCCcccCeEEEEEcCCCCeEEEEE
Q 019258 156 GLVGFNCVKWAS-PTEFVTGGFG------YGLQWWDLRRAGSGGPVLQFKGN-FGSQGKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 156 ~~~~v~~~~~~~-~~~l~t~~~d------~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
. ....++|++ +..+..+... +.|..||+.. .. +...... .... +....++++++|. +. ++
T Consensus 188 ~--~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~---~~-l~~~~~~~~~~~----~~pdgi~~d~~G~-lw-v~ 255 (305)
T 3dr2_A 188 D--HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD---GA-LHDRRHFASVPD----GLPDGFCVDRGGW-LW-SS 255 (305)
T ss_dssp S--SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET---TE-EEEEEEEECCSS----SCCCSEEECTTSC-EE-EC
T ss_pred C--CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC---CC-ccCCeEEEECCC----CCCCeEEECCCCC-EE-Ee
Confidence 2 477899999 6556655554 7899999876 22 2221110 0001 3456788999886 44 34
Q ss_pred ecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCC
Q 019258 228 GSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG 294 (343)
Q Consensus 228 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg 294 (343)
+.+ .|.+||... +....+. ... .+..++|.|++. .|+.++.++
T Consensus 256 ~~~-gv~~~~~~g-~~~~~~~-----------~~~-~~~~~~f~~d~~----------~L~it~~~~ 298 (305)
T 3dr2_A 256 SGT-GVCVFDSDG-QLLGHIP-----------TPG-TASNCTFDQAQQ----------RLFITGGPC 298 (305)
T ss_dssp CSS-EEEEECTTS-CEEEEEE-----------CSS-CCCEEEECTTSC----------EEEEEETTE
T ss_pred cCC-cEEEECCCC-CEEEEEE-----------CCC-ceeEEEEeCCCC----------EEEEEcCCe
Confidence 444 499999843 3333322 122 478899997766 566666554
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.54 E-value=8.8e-06 Score=71.78 Aligned_cols=247 Identities=9% Similarity=0.029 Sum_probs=136.6
Q ss_pred CCeeEEEcc-CCCeEEEEc--CCCcEEEEEccCceeeeeec---cCCccccCeEEEEec-CCEEEEEe-C-----CCcEE
Q 019258 72 TRISSLSTS-HQSLVAAST--LSGSLHVLSSAMQVLLSVDE---NSGFHVGPISGVDLT-GSECVSVG-E-----DGRVN 138 (343)
Q Consensus 72 ~~v~~v~~~-~~~~l~~~s--~dg~v~v~~~~~~~~~~~~~---~~~~h~~~v~~~~~~-~~~~~s~s-~-----dg~v~ 138 (343)
..+..++++ +++++++.. .++.++||.+.+........ ....|...+.++.++ ...+..+. . +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 567889998 677777753 23435666665332221111 112355688999998 34444433 2 57899
Q ss_pred EEECCCCceEEEEEcCC-----CccceEEEEeCC-CCE-EEEEe---CCCcEEEEEccccCCCCCeeEEecccCCC----
Q 019258 139 LVSVIGGGEFKRVYDGN-----GLVGFNCVKWAS-PTE-FVTGG---FGYGLQWWDLRRAGSGGPVLQFKGNFGSQ---- 204 (343)
Q Consensus 139 ~wd~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~-l~t~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---- 204 (343)
+||+.+++ ....+... ....+..+++.+ ... +++-. .++.|.+||+.. ++....+..+....
T Consensus 97 ~~d~~tg~-~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~---g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 97 AWDTLNNQ-LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT---GLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEETTTTE-EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT---CCEEEECTTCTTTSCCSC
T ss_pred EEECCCCe-EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC---CCEEEEecCCCccccccc
Confidence 99999884 34433321 112468888886 444 45555 688999999876 33322222110000
Q ss_pred -----C--C-----------cccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCce-eeeeecCCCCcccccCCccccE
Q 019258 205 -----G--K-----------ASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ-SIVLSGVGTGEAVTHSLSESEV 265 (343)
Q Consensus 205 -----~--~-----------~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~h~~~v 265 (343)
+ . -...++.++++|++..++++......+..+|...... ....... ...+...++.+..
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~g~~g~p 250 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAEL--GSKIERYSEKPIC 250 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHH--HTTCEEEEECCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhh--hcceEecccCCCC
Confidence 0 0 0023688999999876665544444666666431100 0000000 0000001123345
Q ss_pred EEEEEeecCCCCcCCCCCccceEEEecCCeEEEEec-CCCcccccccc--cccceeeecCCCCCeeEEccCCc
Q 019258 266 WEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQ-GEEPFELLAEP--CAINSFDIDPQNPSDVICSLEWE 335 (343)
Q Consensus 266 ~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~-~~~~~~~~~~~--~~i~s~~~~~~~~~~l~~~~~~~ 335 (343)
..+++++++. ..++...++.|..|+. ..+...+...+ ....++++++ ++...++.+..+
T Consensus 251 dgia~d~~G~----------l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~-~g~l~v~~~~~~ 312 (343)
T 2qe8_A 251 DGISIDKDHN----------IYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGS-DGYLYFDCNQLH 312 (343)
T ss_dssp SCEEECTTCC----------EEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECT-TSCEEEEECCGG
T ss_pred ceEEECCCCC----------EEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECC-CCcEEEEeCccc
Confidence 6789998865 6777788899999998 43332322222 3467899987 456666665443
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.51 E-value=2.6e-08 Score=89.19 Aligned_cols=181 Identities=15% Similarity=0.100 Sum_probs=91.8
Q ss_pred CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCcc
Q 019258 81 HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLV 158 (343)
Q Consensus 81 ~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~ 158 (343)
.++.+++++.||.|+.||..+++.+-.... +++.+..+. +..+++++.||.|..||..+++.... +..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~-~~~~~~~ 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTK-LPFTIPE 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEE-CSCCHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeee-eeccCcc
Confidence 578899999999999999886665432221 222222222 55777778999999999988743322 2222110
Q ss_pred ceEE-EEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEE
Q 019258 159 GFNC-VKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237 (343)
Q Consensus 159 ~v~~-~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd 237 (343)
.+.+ ........+++++.++.|..||.++ ++.+.++.... ...+.|.+. .+++++.|+.|+.||
T Consensus 82 ~~~~sp~~~~~~~v~~g~~dg~v~a~D~~t---G~~~w~~~~~~-----------~~~~~p~~~-~v~~~~~dg~v~a~d 146 (369)
T 2hz6_A 82 LVQASPCRSSDGILYMGKKQDIWYVIDLLT---GEKQQTLSSAF-----------ADSLSPSTS-LLYLGRTEYTITMYD 146 (369)
T ss_dssp HHTTCSCC-----CCCCEEEEEEEEECCC-------------------------------------EEEEEEEEEEECCC
T ss_pred ccccCceEecCCEEEEEeCCCEEEEEECCC---CcEEEEecCCC-----------cccccccCC-EEEEEecCCEEEEEE
Confidence 0100 0111245677788899999999998 77666655321 123455544 556788999999999
Q ss_pred ccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
.++++....+.. .......+.++.. ..+ .++.++.||.|+.||..
T Consensus 147 ~~tG~~~W~~~~-------------~~~~~~~~~~~~~----~~~---~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 147 TKTRELRWNATY-------------FDYAASLPEDDVD----YKM---SHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp SSSSSCCCEEEE-------------EEECCBCCCCCTT----CCC---CEEEEETSCEEEEECTT
T ss_pred CCCCCEEEeEec-------------ccccCccccCCcc----ccc---eEEEECCCCEEEEEECC
Confidence 988765444320 0111222222110 001 57888999999999974
No 222
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.50 E-value=2.9e-05 Score=65.50 Aligned_cols=215 Identities=8% Similarity=-0.035 Sum_probs=135.9
Q ss_pred ccccCCcccc--eeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCC--CeeEEEccCCCeEE
Q 019258 11 QVHRFPQSKY--IDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPT--RISSLSTSHQSLVA 86 (343)
Q Consensus 11 ~~~~~~~~~~--i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~--~v~~v~~~~~~~l~ 86 (343)
.+..+|++.. ...+.|+| ++.++++.+..+ ..+|...|+.... .+..+.... ....+.+..+.+.+
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~----dg~Lyvstg~~~---~s~v~~iD~~tg~---v~~~i~l~~~~fgeGi~~~g~~lyv 80 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAE----NDTLFESTGLYG---RSSVRQVALQTGK---VENIHKMDDSYFGEGLTLLNEKLYQ 80 (266)
T ss_dssp EEEEEECCTTCCEEEEEECS----TTEEEEEECSTT---TCEEEEEETTTCC---EEEEEECCTTCCEEEEEEETTEEEE
T ss_pred EEEEEECCCCCCcccEEEeC----CCeEEEECCCCC---CCEEEEEECCCCC---EEEEEecCCCcceEEEEEeCCEEEE
Confidence 6677888864 68999998 566776655321 1257788885532 222222222 22345555444555
Q ss_pred EEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc---cceEEE
Q 019258 87 ASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL---VGFNCV 163 (343)
Q Consensus 87 ~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~---~~v~~~ 163 (343)
+.-.++.+.++|..+.+.+...... ...-..+...++.++.+..++.|.++|..+.+....+...... ..+..+
T Consensus 81 ~t~~~~~v~viD~~t~~v~~~i~~g---~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIKNFTHQ---MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNEL 157 (266)
T ss_dssp EETTCSEEEEEETTTTEEEEEEECC---SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred EEecCCEEEEEECCCCcEEEEEECC---CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeE
Confidence 5556899999999866555443321 1122456667666666667889999999987544444322111 125677
Q ss_pred EeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccC------CCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEE
Q 019258 164 KWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFG------SQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWD 237 (343)
Q Consensus 164 ~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd 237 (343)
.|..+..++....++.|.+-|..+ ++.+..+..... .........+.|+++|++..+++++...+++...+
T Consensus 158 e~~dg~lyvn~~~~~~V~vID~~t---g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 158 EYINGEVWANIWQTDCIARISAKD---GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp EEETTEEEEEETTSSEEEEEETTT---CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred EEECCEEEEecCCCCeEEEEECCC---CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 777543444444589999999998 777777653210 00000134789999999989999999999999999
Q ss_pred ccCC
Q 019258 238 LRWQ 241 (343)
Q Consensus 238 ~~~~ 241 (343)
+...
T Consensus 235 l~~~ 238 (266)
T 2iwa_A 235 LHLV 238 (266)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 8763
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.46 E-value=8.8e-08 Score=85.70 Aligned_cols=179 Identities=9% Similarity=-0.081 Sum_probs=90.5
Q ss_pred cCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccC
Q 019258 124 TGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFG 202 (343)
Q Consensus 124 ~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 202 (343)
.++.+++++.||.|..||..+++...+. .. . .+.+..+.. +..+++++.|+.|+.||..+ ++.+..+.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~-~~-~--~~~s~p~~~~g~~~v~~s~dg~l~a~d~~t---G~~~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTL-KE-D--PVLQVPTHVEEPAFLPDPNDGSLYTLGSKN---NEGLTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEE-EC-C--CSCCCC-----CCEEECTTTCCEEEC--------CCSEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEe-cC-C--CceecceEcCCCEEEEeCCCCEEEEEECCC---CceeeeeeccCc
Confidence 3788999999999999999998644443 33 2 233333334 44677778999999999988 665554432210
Q ss_pred CCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCC
Q 019258 203 SQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSS 282 (343)
Q Consensus 203 ~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~ 282 (343)
.. ....++. . .+ ..+++|+.||.|+.||.++++....+. .+. ...++|++.
T Consensus 81 ~~-~~~sp~~----~-~~-~~v~~g~~dg~v~a~D~~tG~~~w~~~-----------~~~----~~~~~p~~~------- 131 (369)
T 2hz6_A 81 EL-VQASPCR----S-SD-GILYMGKKQDIWYVIDLLTGEKQQTLS-----------SAF----ADSLSPSTS------- 131 (369)
T ss_dssp HH-HTTCSCC-----------CCCCEEEEEEEEECCC-------------------------------------------
T ss_pred cc-cccCceE----e-cC-CEEEEEeCCCEEEEEECCCCcEEEEec-----------CCC----cccccccCC-------
Confidence 00 0001111 1 12 245678899999999999876654443 111 134566555
Q ss_pred CccceEEEecCCeEEEEecCCC-cccccccccccceeeecCCC--CCeeEEccCCceEEEEeC
Q 019258 283 RVLPAMFCSEDGILAVVEQGEE-PFELLAEPCAINSFDIDPQN--PSDVICSLEWESIAIVSR 342 (343)
Q Consensus 283 ~~~~l~s~s~dg~i~~~~~~~~-~~~~~~~~~~i~s~~~~~~~--~~~l~~~~~~~~i~~~~~ 342 (343)
.+++++.||.|+.||.... ..+..... ...+..++++. ...++.++.++.++.|+.
T Consensus 132 ---~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 132 ---LLYLGRTEYTITMYDTKTRELRWNATYF-DYAASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp ----EEEEEEEEEEECCCSSSSSCCCEEEEE-EECCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred ---EEEEEecCCEEEEEECCCCCEEEeEecc-cccCccccCCccccceEEEECCCCEEEEEEC
Confidence 6889999999999997432 33322211 12233333310 145667777888888763
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.43 E-value=0.0002 Score=63.65 Aligned_cols=229 Identities=13% Similarity=0.025 Sum_probs=126.6
Q ss_pred CCCeEEEEcCCCcEEEEEccCceeeeeeccCCc----c--ccCe-EEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEc
Q 019258 81 HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGF----H--VGPI-SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYD 153 (343)
Q Consensus 81 ~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~----h--~~~v-~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~ 153 (343)
.++.+++++.++.|..+|..+++.+-....... + ...+ ..+...+..++.++.++.|..+|..+++...+. .
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~-~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQT-K 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEE-E
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEE-e
Confidence 367888888899999999876554422221100 0 1223 334444888888999999999999988644333 2
Q ss_pred CCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcE
Q 019258 154 GNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTV 233 (343)
Q Consensus 154 ~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v 233 (343)
.... ....... ....++.++.++.|..+|.++ ++.+..+......... ......... + . .++.++.+|.+
T Consensus 131 ~~~~-~~~~p~~-~~~~v~v~~~~g~l~~~d~~t---G~~~W~~~~~~~~~~~--~~~~~~~~~-~-~-~v~~g~~~g~l 200 (376)
T 3q7m_A 131 VAGE-ALSRPVV-SDGLVLIHTSNGQLQALNEAD---GAVKWTVNLDMPSLSL--RGESAPTTA-F-G-AAVVGGDNGRV 200 (376)
T ss_dssp CSSC-CCSCCEE-ETTEEEEECTTSEEEEEETTT---CCEEEEEECCC-------CCCCCCEEE-T-T-EEEECCTTTEE
T ss_pred CCCc-eEcCCEE-ECCEEEEEcCCCeEEEEECCC---CcEEEEEeCCCCceee--cCCCCcEEE-C-C-EEEEEcCCCEE
Confidence 2221 0111111 156788889999999999988 7766665532210000 000111222 2 2 35678889999
Q ss_pred EEEEccCCceeeeeecCCCCcccccCCccccEEE---EEEee--cCCCCcCCCCCccceEEEecCCeEEEEecCCC-ccc
Q 019258 234 FAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWE---VQYDC--HTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFE 307 (343)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~---v~~~p--~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~ 307 (343)
..+|.++++......... ......+.. +.-.| .+. .++.++.+|.|..++.... ..+
T Consensus 201 ~~~d~~tG~~~w~~~~~~-------~~~~~~~~~~~~~~~~p~~~~~----------~v~~~~~~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQRISQ-------ATGSTEIDRLSDVDTTPVVVNG----------VVFALAYNGNLTALDLRSGQIMW 263 (376)
T ss_dssp EEEETTTCCEEEEEECCC------------------CCCCCCEEETT----------EEEEECTTSCEEEEETTTCCEEE
T ss_pred EEEECCCCcEEEEEeccc-------CCCCcccccccccCCCcEEECC----------EEEEEecCcEEEEEECCCCcEEe
Confidence 999998876655543100 000000000 00011 122 5778888899988886432 222
Q ss_pred ccccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 308 LLAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 308 ~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
.... ....++.+.. ..|..++.++.++.++
T Consensus 264 ~~~~-~~~~~~~~~~---~~l~~~~~~g~l~~~d 293 (376)
T 3q7m_A 264 KREL-GSVNDFIVDG---NRIYLVDQNDRVMALT 293 (376)
T ss_dssp EECC-CCEEEEEEET---TEEEEEETTCCEEEEE
T ss_pred eccC-CCCCCceEEC---CEEEEEcCCCeEEEEE
Confidence 2221 2234455543 5667777777777765
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.42 E-value=3.4e-05 Score=69.86 Aligned_cols=255 Identities=9% Similarity=-0.043 Sum_probs=149.5
Q ss_pred CccccCCcccceeeEEecCCCCCCCCeEEEEeec-C------CCCCCceeeeeCCCCCCCCCCccCCC--------CCCe
Q 019258 10 PQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYD-T------DADSPSLETHSISLPASLTPHSQWTP--------PTRI 74 (343)
Q Consensus 10 ~~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D-~------~~~~~~l~~w~~~~~~~~~~~~~~~~--------~~~v 74 (343)
..+.+++-+..- .|.++| +++++..+.+. . ..+ .|.++|..... ....+.. ....
T Consensus 110 ~vv~~I~vG~~P-gia~Sp----Dgk~lyVan~~~~~~~~G~~~~--~VsviD~~t~~---vv~~I~v~g~~r~~~g~~P 179 (426)
T 3c75_H 110 RILGMTDGGFLP-HPVAAE----DGSFFAQASTVFERIARGKRTD--YVEVFDPVTFL---PIADIELPDAPRFLVGTYQ 179 (426)
T ss_dssp EEEEEEEECSSC-EEEECT----TSSCEEEEEEEEEETTEEEEEE--EEEEECTTTCC---EEEEEEETTCCCCCBSCCG
T ss_pred EEEEEEECCCCC-ceEECC----CCCEEEEEeccccccccCCCCC--EEEEEECCCCc---EEEEEECCCccccccCCCc
Confidence 355566666666 899999 77766666531 0 001 36688875422 2222221 1235
Q ss_pred eEEEcc-CCCeEEEEcC--CCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEE
Q 019258 75 SSLSTS-HQSLVAASTL--SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKR 150 (343)
Q Consensus 75 ~~v~~~-~~~~l~~~s~--dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~ 150 (343)
..+.|+ ++++|+++.. ++.|.+.|+...+.+...... .+..+... ...+++.+.||.+.+.+..+++....
T Consensus 180 ~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~-----g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~ 254 (426)
T 3c75_H 180 WMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP-----DCYHIFPASPTVFYMNCRDGSLARVDFADGETKVT 254 (426)
T ss_dssp GGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-----SEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEE
T ss_pred ceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC-----CceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE
Confidence 678888 8888888764 578999999866554433321 22223223 56778888999999999855532221
Q ss_pred ---EEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCC--eeEEecccC---CCCCcccCeEEEEEcCCCC
Q 019258 151 ---VYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGP--VLQFKGNFG---SQGKASGMIHSVDIHPSRK 221 (343)
Q Consensus 151 ---~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~---~~~~~~~~i~~v~~~p~~~ 221 (343)
.+......-...+.+.+ +..++..+..+.+.+.|+.. ... +..+..... ..+........++++|++.
T Consensus 255 ~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~---~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~ 331 (426)
T 3c75_H 255 NTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTA---EGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSD 331 (426)
T ss_dssp ECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECS---SCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGT
T ss_pred eeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccC---CceEEeeeeeeccccccccccccCCceeeEEcCCCC
Confidence 11111110112345566 66666677889999999865 221 111111000 0000112233478899988
Q ss_pred eEEEEEec---------CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-
Q 019258 222 HTCLAGGS---------SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS- 291 (343)
Q Consensus 222 ~~~~sg~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s- 291 (343)
.++++-.. ++.|.++|+.+.+....+. -....+.|.|+|++.. .++++.
T Consensus 332 rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~------------vg~~P~gia~spDg~~---------~lyv~n~ 390 (426)
T 3c75_H 332 RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE------------LGHEIDSINVSQDAEP---------LLYALSA 390 (426)
T ss_dssp EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE------------EEEEECEEEECCSSSC---------EEEEEET
T ss_pred EEEEEecccccccccCCCCEEEEEECCCCeEEEEEE------------CCCCcCeEEEccCCCE---------EEEEEcC
Confidence 77766432 3579999998865544443 1235889999999873 455555
Q ss_pred cCCeEEEEecCC
Q 019258 292 EDGILAVVEQGE 303 (343)
Q Consensus 292 ~dg~i~~~~~~~ 303 (343)
.++.|.++|...
T Consensus 391 ~s~~VsVID~~t 402 (426)
T 3c75_H 391 GTQTLHIYDAAT 402 (426)
T ss_dssp TTTEEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 699999999753
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.41 E-value=0.00023 Score=64.27 Aligned_cols=296 Identities=10% Similarity=0.060 Sum_probs=156.6
Q ss_pred CCcccceeeEEecCC-CCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCC-----eeEEEcc---CCC-e
Q 019258 15 FPQSKYIDAVRWLPP-LSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTR-----ISSLSTS---HQS-L 84 (343)
Q Consensus 15 ~~~~~~i~~v~w~p~-~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~-----v~~v~~~---~~~-~ 84 (343)
.|..+-+...+..+. .....+.|++-.-|.+..+..--+..++..... -++-|-+- ..+..++ +.+ +
T Consensus 22 ~~~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~g---de~HH~gwn~css~~~~~~~~~~~r~~l 98 (462)
T 2ece_A 22 APPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYIN---DELHHFGWNACSSALCPNGKPNIERRFL 98 (462)
T ss_dssp SCCCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSC---CCBCCCEESCCGGGGSTTCCTTCCSCEE
T ss_pred CCcceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCC---CcccccchhhhhhhcccccCCCccCCEE
Confidence 455556666666663 334567888877775322111113332111100 01122111 1111112 234 4
Q ss_pred EEEEcCCCcEEEEEccCc----eeeeeec---cC-CccccCeEEEEec-CCEEEEEeCC------CcEEEEECCCCceEE
Q 019258 85 VAASTLSGSLHVLSSAMQ----VLLSVDE---NS-GFHVGPISGVDLT-GSECVSVGED------GRVNLVSVIGGGEFK 149 (343)
Q Consensus 85 l~~~s~dg~v~v~~~~~~----~~~~~~~---~~-~~h~~~v~~~~~~-~~~~~s~s~d------g~v~~wd~~~~~~~~ 149 (343)
++.+..++.|+++|+... +.....+ .. +.....-..+... +..++++..+ |.|.+.|..+.+ +.
T Consensus 99 ~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~-v~ 177 (462)
T 2ece_A 99 IVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFE-PL 177 (462)
T ss_dssp EEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCC-EE
T ss_pred EEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCe-EE
Confidence 555667899999998632 2222221 00 0001112334444 3377776655 789999999885 55
Q ss_pred EEEcCC-Cc-cceEEEEeCC-CCEEEEEe-------------------CCCcEEEEEccccCCCCCeeEEecccCCCCCc
Q 019258 150 RVYDGN-GL-VGFNCVKWAS-PTEFVTGG-------------------FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKA 207 (343)
Q Consensus 150 ~~~~~~-~~-~~v~~~~~~~-~~~l~t~~-------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 207 (343)
..+... .. .--+.+.|+| .+.+++.. .+.+|.+||+.. .+.+.++..... .
T Consensus 178 ~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~---~k~~~tI~vg~~-g--- 250 (462)
T 2ece_A 178 GKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK---RKRIHSLTLGEE-N--- 250 (462)
T ss_dssp EECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT---TEEEEEEESCTT-E---
T ss_pred EEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC---CcEeeEEecCCC-C---
Confidence 555422 11 1234578888 66677664 479999999987 555555553210 0
Q ss_pred ccCeEEEEE--cCCCCeEEEEEe-----cCCcEEEEEccCCceee-eeecCCCCc---ccc-----cCCccccEEEEEEe
Q 019258 208 SGMIHSVDI--HPSRKHTCLAGG-----SSGTVFAWDLRWQQQSI-VLSGVGTGE---AVT-----HSLSESEVWEVQYD 271 (343)
Q Consensus 208 ~~~i~~v~~--~p~~~~~~~sg~-----~dg~v~iwd~~~~~~~~-~~~~~~~~~---~~~-----~~~h~~~v~~v~~~ 271 (343)
.....+.| +|++...++++- .+++|.+|....+.... ....+.... .+. ..+-......|.++
T Consensus 251 -~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 251 -RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp -EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred -CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 12334444 999988877776 78889887765422110 000000000 000 00002346789999
Q ss_pred ecCCCCcCCCCCccceEEEecCCeEEEEecCC-Cccccccc---cc---------------ccceeeecCCCCCeeEEcc
Q 019258 272 CHTKSSNISSSRVLPAMFCSEDGILAVVEQGE-EPFELLAE---PC---------------AINSFDIDPQNPSDVICSL 332 (343)
Q Consensus 272 p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~-~~~~~~~~---~~---------------~i~s~~~~~~~~~~l~~~~ 332 (343)
|++.. ..++.-..+.|.+++-.. ...++... .. .-..|.+++ +|++|.++.
T Consensus 330 ~DGrf---------LYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp-DGk~LyVaN 399 (462)
T 2ece_A 330 LDDKF---------LYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR-DGRRVYVTN 399 (462)
T ss_dssp TTSCE---------EEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT-TSSEEEEEC
T ss_pred CCCCE---------EEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC-CCCEEEEEc
Confidence 99985 556666778999998532 11222211 11 147788998 678888887
No 227
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.40 E-value=4.1e-05 Score=66.50 Aligned_cols=214 Identities=10% Similarity=0.024 Sum_probs=130.8
Q ss_pred CCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccce
Q 019258 82 QSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGF 160 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v 160 (343)
+..+..++.++.+..++.. ++....... +...+.++... +..+..++.++.|..+|.. ++..... ..... .+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~---~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~-~~~~~-~~ 179 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT---KKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRF-KTNDA-IT 179 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC---SSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEE-ECSSC-CC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC---CCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEE-ecCCC-ce
Confidence 5678888888989988876 333222211 22234444555 5567778888999999988 5433333 22222 46
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccC
Q 019258 161 NCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240 (343)
Q Consensus 161 ~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~ 240 (343)
.++...+...+..++ +.|..+| .. ++....+.... ..+.++...+++. + ..++.++.+..+|. +
T Consensus 180 ~~~~~d~~g~l~v~t--~~l~~~d-~~---g~~~~~~~~~~-------~~~~~~~~~~~g~-l-~v~t~~~gl~~~~~-~ 243 (330)
T 3hxj_A 180 SAASIGKDGTIYFGS--DKVYAIN-PD---GTEKWNFYAGY-------WTVTRPAISEDGT-I-YVTSLDGHLYAINP-D 243 (330)
T ss_dssp SCCEECTTCCEEEES--SSEEEEC-TT---SCEEEEECCSS-------CCCSCCEECTTSC-E-EEEETTTEEEEECT-T
T ss_pred eeeEEcCCCEEEEEe--CEEEEEC-CC---CcEEEEEccCC-------cceeceEECCCCe-E-EEEcCCCeEEEECC-C
Confidence 666666644566566 8899999 55 55555544322 4577888888763 3 45777888998884 3
Q ss_pred CceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccccccc-ccccceee
Q 019258 241 QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAE-PCAINSFD 319 (343)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~-~~~i~s~~ 319 (343)
+.....+. .....+..+...+++ .|+.++.+|.|..++...+..+.... ...+.++.
T Consensus 244 g~~~~~~~-----------~~~~~~~~~~~~~~g-----------~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~~ 301 (330)
T 3hxj_A 244 GTEKWRFK-----------TGKRIESSPVIGNTD-----------TIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPV 301 (330)
T ss_dssp SCEEEEEE-----------CSSCCCSCCEECTTS-----------CEEEECTTCEEEEECTTSCEEEEEECSSCCCSCCE
T ss_pred CCEeEEee-----------CCCCccccceEcCCC-----------eEEEecCCCCEEEECCCCcEEEEEEcCCccccceE
Confidence 33333332 111222334444332 58889999999999864333333332 34577777
Q ss_pred ecCCCCCeeEEccCCceEEEEeC
Q 019258 320 IDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 320 ~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.++ + ..|..|+.++.+++...
T Consensus 302 ~d~-~-g~l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 302 IDE-N-GTIYFGTRNGKFYALFN 322 (330)
T ss_dssp ECT-T-CCEEEECTTSCEEEEEC
T ss_pred EcC-C-CEEEEEcCCCeEEEEec
Confidence 765 3 46777888899888754
No 228
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.40 E-value=1.6e-05 Score=69.16 Aligned_cols=274 Identities=11% Similarity=-0.024 Sum_probs=146.7
Q ss_pred cCCCCccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCC-CCeeEEEccCCCe
Q 019258 6 VRTPPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPP-TRISSLSTSHQSL 84 (343)
Q Consensus 6 ~~~~~~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~-~~v~~v~~~~~~~ 84 (343)
.++...+|+++.+..+. -+|... .+..+..++.++. |..++ ..... +...... ..+.++....+..
T Consensus 6 ~~~g~~~W~~~~~~~~~---~~~~~d-~~g~l~v~t~~~~-----l~~~d-~~g~~---~~~~~~~~~~~~~~~~~~~g~ 72 (330)
T 3hxj_A 6 VNDCKIKWEFLIGNSID---SSPILA-KNGTIYLGSSNKN-----LYAIN-TDGSV---KWFFKSGEIIECRPSIGKDGT 72 (330)
T ss_dssp ------CCTTTSCEEEC---CCCEEC-TTSCEECSSTTTT-----TEEEC-TTSCE---EESSCGGGEEEECCEETTTTE
T ss_pred cCCceEEEEEeCCCCcc---cCceEc-cCCeEEEEcCCCE-----EEEEC-CCCcE---EEEEecCCCcccceEEecCCc
Confidence 34455777777655432 223211 2334555555543 44566 32211 1111112 2234555444566
Q ss_pred EEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEE
Q 019258 85 VAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVK 164 (343)
Q Consensus 85 l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~ 164 (343)
|.+++.+ +..|+.. ++.+.... ..........+.+..+..++.++.|..+|.. ++..... ..... .+.++.
T Consensus 73 l~v~t~~--l~~~d~~-g~~~~~~~---~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~-~~~~~-~~~~~~ 143 (330)
T 3hxj_A 73 IYFGSDK--VYAINPD-GTEKWRFD---TKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRF-KTKKA-IYATPI 143 (330)
T ss_dssp ECCSSCE--EEEECCC-GGGGGGSC---C-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEE-ECSSC-CCSCCE
T ss_pred EEEecCc--EEEECCC-CcEEEEEE---CCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEE-cCCCc-eeeeeE
Confidence 7776666 7777652 22211111 1111112222237778888889999999988 5433333 22222 355556
Q ss_pred eCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCcee
Q 019258 165 WASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQS 244 (343)
Q Consensus 165 ~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~ 244 (343)
..+...+..++.++.|..+|... +....+.... ..+.++...+++. ++ .++ +.|..+| .++...
T Consensus 144 ~~~~g~l~vgt~~~~l~~~d~~g----~~~~~~~~~~-------~~~~~~~~d~~g~-l~-v~t--~~l~~~d-~~g~~~ 207 (330)
T 3hxj_A 144 VSEDGTIYVGSNDNYLYAINPDG----TEKWRFKTND-------AITSAASIGKDGT-IY-FGS--DKVYAIN-PDGTEK 207 (330)
T ss_dssp ECTTSCEEEECTTSEEEEECTTS----CEEEEEECSS-------CCCSCCEECTTCC-EE-EES--SSEEEEC-TTSCEE
T ss_pred EcCCCEEEEEcCCCEEEEECCCC----CEeEEEecCC-------CceeeeEEcCCCE-EE-EEe--CEEEEEC-CCCcEE
Confidence 56555677788889999998742 3334443222 4466777777664 43 444 8899999 554444
Q ss_pred eeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcccccccc-cccceeeecCC
Q 019258 245 IVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAEP-CAINSFDIDPQ 323 (343)
Q Consensus 245 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~-~~i~s~~~~~~ 323 (343)
.... .....+.++...+++ .++.++.++.|..++......+..... ..+.++.+.+
T Consensus 208 ~~~~-----------~~~~~~~~~~~~~~g-----------~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~- 264 (330)
T 3hxj_A 208 WNFY-----------AGYWTVTRPAISEDG-----------TIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGN- 264 (330)
T ss_dssp EEEC-----------CSSCCCSCCEECTTS-----------CEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECT-
T ss_pred EEEc-----------cCCcceeceEECCCC-----------eEEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcC-
Confidence 3332 223457777777654 477788889998887654443333332 2345566654
Q ss_pred CCCeeEEccCCceEEEEe
Q 019258 324 NPSDVICSLEWESIAIVS 341 (343)
Q Consensus 324 ~~~~l~~~~~~~~i~~~~ 341 (343)
+ ..|..++.++.++.++
T Consensus 265 ~-g~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 265 T-DTIYFGSYDGHLYAIN 281 (330)
T ss_dssp T-SCEEEECTTCEEEEEC
T ss_pred C-CeEEEecCCCCEEEEC
Confidence 2 4666677777888876
No 229
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.34 E-value=0.00037 Score=62.02 Aligned_cols=284 Identities=12% Similarity=0.037 Sum_probs=149.5
Q ss_pred CCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEc----------CCCcEEEEEcc
Q 019258 32 PLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAAST----------LSGSLHVLSSA 100 (343)
Q Consensus 32 ~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s----------~dg~v~v~~~~ 100 (343)
++++.+...........-.+.+.|... .+.+..++-..... +.++ ++..|+++. .++.|.+||..
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t---~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEA---GRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTT---TEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCC---CeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 467666555442100001466777744 22233333222223 8888 778777765 36789999998
Q ss_pred CceeeeeeccCC---c-cccCeEEEEec--CCEEEEEeC--CCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE
Q 019258 101 MQVLLSVDENSG---F-HVGPISGVDLT--GSECVSVGE--DGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF 171 (343)
Q Consensus 101 ~~~~~~~~~~~~---~-h~~~v~~~~~~--~~~~~s~s~--dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l 171 (343)
+.+.+....... . ....-..+.++ +++++.+.. ++.|.++|+.+.+ +...+.-.. ... .+.. ...+
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~-vv~tI~v~g---~~~-~~P~g~~~~ 192 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA-FKRMLDVPD---CYH-IFPTAPDTF 192 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE-EEEEEECCS---EEE-EEEEETTEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc-EEEEEECCC---cce-eecCCCcee
Confidence 665443332110 0 00123456666 787777653 6899999999985 554443322 211 1222 6678
Q ss_pred EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeE-EEEEc-CCCCeEEEEEecCCcEEEEEccCCce-eeeee
Q 019258 172 VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIH-SVDIH-PSRKHTCLAGGSSGTVFAWDLRWQQQ-SIVLS 248 (343)
Q Consensus 172 ~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~v~~~-p~~~~~~~sg~~dg~v~iwd~~~~~~-~~~~~ 248 (343)
++.+.||++.+.++.. .++......... .....++. ...|. +++..++ .+.+|+|++.|+..... .....
T Consensus 193 ~~~~~DG~~~~v~~~~--~g~v~~~~~~~~---~~~~~~~~~~~~~~~~dG~~~~--vs~~g~V~v~d~~~~~~~v~~~~ 265 (386)
T 3sjl_D 193 FMHCRDGSLAKVAFGT--EGTPEITHTEVF---HPEDEFLINHPAYSQKAGRLVW--PTYTGKIHQIDLSSGDAKFLPAV 265 (386)
T ss_dssp EEEETTSCEEEEECCS--SSCCEEEECCCC---SCTTSCBCSCCEEETTTTEEEE--EBTTSEEEEEECTTSSCEECCCE
T ss_pred EEECCCCCEEEEECCC--CCeEEEeeccee---ccccccccccceeEcCCCcEEE--EeCCCEEEEEECCCCcceeecce
Confidence 8999999999999976 233322111110 00002222 23553 5654333 46689999999975321 11111
Q ss_pred cCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEec----------CCeEEEEecCC-Ccccccccccccce
Q 019258 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSE----------DGILAVVEQGE-EPFELLAEPCAINS 317 (343)
Q Consensus 249 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~----------dg~i~~~~~~~-~~~~~~~~~~~i~s 317 (343)
.+.........-..+....++++|++. .++.... .++|+++|... +....+.-...+++
T Consensus 266 ~~~~~~~~~~g~~p~g~q~~a~~~~~~----------~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~ 335 (386)
T 3sjl_D 266 EALTEAERADGWRPGGWQQVAYHRALD----------RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDS 335 (386)
T ss_dssp ESSCHHHHHTTEEECSSSCEEEETTTT----------EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECE
T ss_pred eccccccccccccCCCcceeeECCCCC----------eEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcce
Confidence 000000000000122334577788766 3444332 24688888753 33333333457899
Q ss_pred eeecCCCCCeeEEcc-CCceEEEEe
Q 019258 318 FDIDPQNPSDVICSL-EWESIAIVS 341 (343)
Q Consensus 318 ~~~~~~~~~~l~~~~-~~~~i~~~~ 341 (343)
+.++++....|+.+. .++.|.+++
T Consensus 336 lavs~D~~~~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 336 INVSQDEKPLLYALSTGDKTLYIHD 360 (386)
T ss_dssp EEECSSSSCEEEEEETTTTEEEEEE
T ss_pred EEECCCCCeEEEEEcCCCCeEEEEE
Confidence 999995323555543 367888875
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.31 E-value=0.00078 Score=56.73 Aligned_cols=217 Identities=6% Similarity=-0.153 Sum_probs=130.5
Q ss_pred CccCCCCCC--eeEEEccCCCeEEEEcC---CCcEEEEEccCceeeeeeccCCccccCeEEEEecCC-EEEEEeCCCcEE
Q 019258 65 HSQWTPPTR--ISSLSTSHQSLVAASTL---SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGS-ECVSVGEDGRVN 138 (343)
Q Consensus 65 ~~~~~~~~~--v~~v~~~~~~~l~~~s~---dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~s~s~dg~v~ 138 (343)
+..++|... ...+.|+....|+.++. ++.|+++|+.+.+.+...... .+ .....+.+.++ .+++.-.++.+.
T Consensus 12 v~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~-~~-~fgeGi~~~g~~lyv~t~~~~~v~ 89 (266)
T 2iwa_A 12 LNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD-DS-YFGEGLTLLNEKLYQVVWLKNIGF 89 (266)
T ss_dssp EEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC-TT-CCEEEEEEETTEEEEEETTCSEEE
T ss_pred EEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC-CC-cceEEEEEeCCEEEEEEecCCEEE
Confidence 334455543 57899983245655543 579999999866655433221 11 12235666654 455666789999
Q ss_pred EEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcC
Q 019258 139 LVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP 218 (343)
Q Consensus 139 ~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p 218 (343)
++|..+.+...+ +..... .-..++......+ .+..++.|.++|..+ .+.+..+......+.. ...+.+.+.
T Consensus 90 viD~~t~~v~~~-i~~g~~-~g~glt~Dg~~l~-vs~gs~~l~viD~~t---~~v~~~I~Vg~~~~p~--~~~nele~~- 160 (266)
T 2iwa_A 90 IYDRRTLSNIKN-FTHQMK-DGWGLATDGKILY-GSDGTSILYEIDPHT---FKLIKKHNVKYNGHRV--IRLNELEYI- 160 (266)
T ss_dssp EEETTTTEEEEE-EECCSS-SCCEEEECSSSEE-EECSSSEEEEECTTT---CCEEEEEECEETTEEC--CCEEEEEEE-
T ss_pred EEECCCCcEEEE-EECCCC-CeEEEEECCCEEE-EECCCCeEEEEECCC---CcEEEEEEECCCCccc--ccceeEEEE-
Confidence 999998854444 432211 1234655544444 455689999999988 6666666533210100 236677877
Q ss_pred CCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcc--cccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeE
Q 019258 219 SRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEA--VTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296 (343)
Q Consensus 219 ~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i 296 (343)
++ .+++....++.|.+.|..+++....+...+.... .....-......|+|+|++.. .++++...++|
T Consensus 161 dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~---------lfVTgk~~~~v 230 (266)
T 2iwa_A 161 NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR---------IFVTGKLWPKL 230 (266)
T ss_dssp TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE---------EEEEETTCSEE
T ss_pred CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCE---------EEEECCCCCeE
Confidence 45 5777666788999999998654333321000000 000001135689999999886 78888888999
Q ss_pred EEEecC
Q 019258 297 AVVEQG 302 (343)
Q Consensus 297 ~~~~~~ 302 (343)
+..+..
T Consensus 231 ~~i~l~ 236 (266)
T 2iwa_A 231 FEIKLH 236 (266)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 887753
No 231
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.30 E-value=0.0021 Score=63.16 Aligned_cols=241 Identities=13% Similarity=0.079 Sum_probs=142.3
Q ss_pred eeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEE
Q 019258 74 ISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVY 152 (343)
Q Consensus 74 v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~ 152 (343)
|.++.......|..++.++-+..|+....+....... .+...|.++... ...+..++.++-+..||..+++ .....
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~--~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~-~~~~~ 251 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPI--LGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKE-IKNYL 251 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC------CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTE-EEEEC
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCC--CCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCe-EEEee
Confidence 7777776345566677665588888764332221111 134568888776 5556666655458999987763 43332
Q ss_pred cCC------CccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEeccc-CCCCCcccCeEEEEEcCCCCeEEE
Q 019258 153 DGN------GLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNF-GSQGKASGMIHSVDIHPSRKHTCL 225 (343)
Q Consensus 153 ~~~------~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~v~~~p~~~~~~~ 225 (343)
... ....|.++...+.+.+..|+.+ .|.+||... .....+.... .........|.++..++++. +-
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~----~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lW 324 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGT----DSFASYSSNPVENGSLSQRSVRSIFMDSQGG--MW 324 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTT----TEEEEECCCTTSTTSCSSSCEEEEEECTTSC--EE
T ss_pred cCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCC----CeEEEEecCCCCCCCCCCCcEEEEEEeCCcC--EE
Confidence 211 1235899988885566667766 688899765 2333332111 01112225699999999875 34
Q ss_pred EEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc
Q 019258 226 AGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP 305 (343)
Q Consensus 226 sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~ 305 (343)
.|+.++-|..||....... .+..... ........|.++...+++ .|..|+.++.|..++.....
T Consensus 325 igt~~~Gl~~~~~~~~~~~-~~~~~~~----~~~l~~~~V~~i~~d~~g-----------~lWiGt~~~Gl~~~~~~~~~ 388 (795)
T 4a2l_A 325 LGTYFGGLNYYHPIRNRFK-NIRNIPY----KNSLSDNVVSCIVEDKDK-----------NLWIGTNDGGLNLYNPITQR 388 (795)
T ss_dssp EEESSSCEEEECGGGGSSE-EECCCTT----SSSCSCSSEEEEEECTTS-----------CEEEEESSSCEEEECTTTCC
T ss_pred EEECCCCeEEeCCCcccce-EEcCCCC----CCCCCCCeeEEEEECCCC-----------CEEEEECCCCeEEEcCCCCc
Confidence 6888888999987653321 1110000 001124568999887765 47889998889999876443
Q ss_pred cccccc----------ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 306 FELLAE----------PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 306 ~~~~~~----------~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
...+.. ...|.++..++ ++..|-.|+.++.++.++
T Consensus 389 ~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 389 FTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp EEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEE
T ss_pred EEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEe
Confidence 322211 24578888776 334266666666787775
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.27 E-value=0.00057 Score=56.56 Aligned_cols=199 Identities=8% Similarity=-0.091 Sum_probs=117.6
Q ss_pred CccCCCCC--CeeEEEccCCCeEEEEcCCC--cEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEE
Q 019258 65 HSQWTPPT--RISSLSTSHQSLVAASTLSG--SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNL 139 (343)
Q Consensus 65 ~~~~~~~~--~v~~v~~~~~~~l~~~s~dg--~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~ 139 (343)
+.+++|.. -...+.|.++.++.+++..| .|+.+|+.+++.+......... ---.+... +..++....++.+.+
T Consensus 12 ~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~--fgeGi~~~~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY--FGAGIVAWRDRLIQLTWRNHEGFV 89 (243)
T ss_dssp EEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC--CEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc--ceeEEEEeCCEEEEEEeeCCEEEE
Confidence 34456654 46689998655555555544 8999999876655444322111 11344555 555566678999999
Q ss_pred EECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCC
Q 019258 140 VSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219 (343)
Q Consensus 140 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~ 219 (343)
+|..+.+ ....+..... =..+++.... |+.+..+++|.++|..+ .+.+.++......... ..++-+.+. +
T Consensus 90 ~D~~tl~-~~~ti~~~~~--Gwglt~dg~~-L~vSdgs~~l~~iDp~t---~~~~~~I~V~~~g~~~--~~lNeLe~~-~ 159 (243)
T 3mbr_X 90 YDLATLT-PRARFRYPGE--GWALTSDDSH-LYMSDGTAVIRKLDPDT---LQQVGSIKVTAGGRPL--DNLNELEWV-N 159 (243)
T ss_dssp EETTTTE-EEEEEECSSC--CCEEEECSSC-EEEECSSSEEEEECTTT---CCEEEEEECEETTEEC--CCEEEEEEE-T
T ss_pred EECCcCc-EEEEEeCCCC--ceEEeeCCCE-EEEECCCCeEEEEeCCC---CeEEEEEEEccCCccc--ccceeeEEe-C
Confidence 9999985 4444433322 2456655444 44455689999999988 6666666543211111 345666665 3
Q ss_pred CCeEEEEEecCCcEEEEEccCCceeeeeecCCCCccccc--CCccccEEEEEEeecCCC
Q 019258 220 RKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTH--SLSESEVWEVQYDCHTKS 276 (343)
Q Consensus 220 ~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~ 276 (343)
+ .+++....+..|.+.|.++++....+--.+....... ..-....+.|+|+|+...
T Consensus 160 G-~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 160 G-ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDR 217 (243)
T ss_dssp T-EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTE
T ss_pred C-EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCE
Confidence 4 4776666788999999998654333321110000000 012245789999998774
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.26 E-value=0.0002 Score=59.95 Aligned_cols=198 Identities=12% Similarity=-0.025 Sum_probs=120.7
Q ss_pred CccCCCCCC--eeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEE
Q 019258 65 HSQWTPPTR--ISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVS 141 (343)
Q Consensus 65 ~~~~~~~~~--v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd 141 (343)
+..++|... ...+.|.++.++.+.+.+|.|+++|+.+.+.+... .. . ..--..+... +..++....++.+.++|
T Consensus 46 v~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~-~~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 46 IREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RL-G-NIFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-EC-T-TCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred EEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-C-CcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 344555443 46888887677778888899999999865544333 11 1 1112346666 66666777899999999
Q ss_pred CCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCC
Q 019258 142 VIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRK 221 (343)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~ 221 (343)
..+.+...++ ..... -..+++. +..|+.+..+++|.++|..+ .+.+.++......+.. ..++-+.|. +|
T Consensus 123 ~~Tl~~~~ti-~~~~e--GwGLt~D-g~~L~vSdGs~~l~~iDp~T---~~v~~~I~V~~~g~~v--~~lNeLe~~-dG- 191 (268)
T 3nok_A 123 GMPPQRERTT-RYSGE--GWGLCYW-NGKLVRSDGGTMLTFHEPDG---FALVGAVQVKLRGQPV--ELINELECA-NG- 191 (268)
T ss_dssp TTTTEEEEEE-ECSSC--CCCEEEE-TTEEEEECSSSEEEEECTTT---CCEEEEEECEETTEEC--CCEEEEEEE-TT-
T ss_pred CCcCcEEEEE-eCCCc--eeEEecC-CCEEEEECCCCEEEEEcCCC---CeEEEEEEeCCCCccc--ccccccEEe-CC-
Confidence 9998544444 32222 2345544 45566566699999999988 6766666543311111 345677776 45
Q ss_pred eEEEEEecCCcEEEEEccCCceeeeeecCCCCcccc--cCCccccEEEEEEeecCCC
Q 019258 222 HTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVT--HSLSESEVWEVQYDCHTKS 276 (343)
Q Consensus 222 ~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~v~~~p~~~~ 276 (343)
.+++....+..|.+.|.++++....+-..+...... ...-..-.+.|+|+|+...
T Consensus 192 ~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~r 248 (268)
T 3nok_A 192 VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGR 248 (268)
T ss_dssp EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCC
T ss_pred EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCE
Confidence 577666678899999998865433322100000000 0112245789999998775
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.25 E-value=0.00018 Score=60.16 Aligned_cols=191 Identities=8% Similarity=-0.039 Sum_probs=122.2
Q ss_pred CeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCee
Q 019258 117 PISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVL 195 (343)
Q Consensus 117 ~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~ 195 (343)
-...+.+. +..+++.+.+|.|+.+|+.+++..... ..... ---.+........+..-.++.+.+||..+ .+.+.
T Consensus 56 ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~-FgeGit~~g~~Ly~ltw~~~~v~V~D~~T---l~~~~ 130 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI-FAEGLASDGERLYQLTWTEGLLFTWSGMP---PQRER 130 (268)
T ss_dssp CEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC-CEEEEEECSSCEEEEESSSCEEEEEETTT---TEEEE
T ss_pred ccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc-ceeEEEEeCCEEEEEEccCCEEEEEECCc---CcEEE
Confidence 34678888 666778889999999999998655555 22221 12346666666677766799999999988 77777
Q ss_pred EEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCC
Q 019258 196 QFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTK 275 (343)
Q Consensus 196 ~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 275 (343)
++.... + + ..++ +++..++++- .+++|.++|..+.+....+. +... ..--..++.|.|. ++.
T Consensus 131 ti~~~~--e----G--wGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~-V~~~-----g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 131 TTRYSG--E----G--WGLC--YWNGKLVRSD-GGTMLTFHEPDGFALVGAVQ-VKLR-----GQPVELINELECA-NGV 192 (268)
T ss_dssp EEECSS--C----C--CCEE--EETTEEEEEC-SSSEEEEECTTTCCEEEEEE-CEET-----TEECCCEEEEEEE-TTE
T ss_pred EEeCCC--c----e--eEEe--cCCCEEEEEC-CCCEEEEEcCCCCeEEEEEE-eCCC-----CcccccccccEEe-CCE
Confidence 776422 1 2 2333 3456666654 58899999988755433332 1100 0011245777777 332
Q ss_pred CCcCCCCCccceEEEecCCeEEEEecCCCc-ccccc--------------cccccceeeecCCCCCeeEEccCCceEEEE
Q 019258 276 SSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLA--------------EPCAINSFDIDPQNPSDVICSLEWESIAIV 340 (343)
Q Consensus 276 ~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~--------------~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~ 340 (343)
..+..-.++.|.++|..... ...+. ...-.|.++++|+.+.+.++|--|..+|-.
T Consensus 193 ----------lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 193 ----------IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEV 262 (268)
T ss_dssp ----------EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEE
T ss_pred ----------EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEE
Confidence 33444467789888875332 11111 112469999999878899999999888754
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.24 E-value=0.00052 Score=57.36 Aligned_cols=199 Identities=8% Similarity=-0.058 Sum_probs=116.8
Q ss_pred CccCCCCCC--eeEEEccCCCeEEEEcCCC--cEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEE
Q 019258 65 HSQWTPPTR--ISSLSTSHQSLVAASTLSG--SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNL 139 (343)
Q Consensus 65 ~~~~~~~~~--v~~v~~~~~~~l~~~s~dg--~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~ 139 (343)
+..++|... ...+.|+++.++.+++.+| .|+++|+.+.+.+....... ..--..+... +..++....++.+.+
T Consensus 34 v~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEEEeeCCEEEE
Confidence 445566544 4788888655566666666 89999998766554433211 1112345555 444555667999999
Q ss_pred EECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCC
Q 019258 140 VSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219 (343)
Q Consensus 140 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~ 219 (343)
+|..+.+...++..... =..+++... .|+.+..+++|.++|..+ .+.+.++......+.. ..++-+.+. +
T Consensus 112 ~D~~t~~~~~ti~~~~e---G~glt~dg~-~L~~SdGs~~i~~iDp~T---~~v~~~I~V~~~g~~~--~~lNELe~~-~ 181 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDGE---GWGLTHNDQ-YLIMSDGTPVLRFLDPES---LTPVRTITVTAHGEEL--PELNELEWV-D 181 (262)
T ss_dssp EETTTCCEEEEEECSSC---CCCEEECSS-CEEECCSSSEEEEECTTT---CSEEEEEECEETTEEC--CCEEEEEEE-T
T ss_pred EECccCcEEEEEECCCC---ceEEecCCC-EEEEECCCCeEEEEcCCC---CeEEEEEEeccCCccc--cccceeEEE-C
Confidence 99999864444432222 234554444 444444588899999988 6666666543211111 235557776 4
Q ss_pred CCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccc-cCCccccEEEEEEeecCCC
Q 019258 220 RKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVT-HSLSESEVWEVQYDCHTKS 276 (343)
Q Consensus 220 ~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~ 276 (343)
+ .+++....+..|.+.|.++++....+-..+...... ...-....+.|+|+|+...
T Consensus 182 G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~ 238 (262)
T 3nol_A 182 G-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHR 238 (262)
T ss_dssp T-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTE
T ss_pred C-EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCE
Confidence 4 577766678899999998865443332111000000 0111245689999998774
No 236
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.21 E-value=0.0057 Score=60.10 Aligned_cols=246 Identities=9% Similarity=0.070 Sum_probs=144.1
Q ss_pred CCCeeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeecc----CCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCC
Q 019258 71 PTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDEN----SGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGG 145 (343)
Q Consensus 71 ~~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~----~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~ 145 (343)
...|.++.......|..|+.++-+..|+....+....... .......|.++... ...+..|..+ -|.+||..++
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~ 292 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTD 292 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTT
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCC
Confidence 4568887766445566666554488888764332222111 01123568998887 4455555555 4899998776
Q ss_pred ceEEEEEcCC------CccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCC
Q 019258 146 GEFKRVYDGN------GLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219 (343)
Q Consensus 146 ~~~~~~~~~~------~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~ 219 (343)
. ........ ....|.++...+.+.+-.|+.++.|..+|... .....+.............|.++..+++
T Consensus 293 ~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~----~~~~~~~~~~~~~~l~~~~V~~i~~d~~ 367 (795)
T 4a2l_A 293 S-FASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIR----NRFKNIRNIPYKNSLSDNVVSCIVEDKD 367 (795)
T ss_dssp E-EEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGG----GSSEEECCCTTSSSCSCSSEEEEEECTT
T ss_pred e-EEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCc----ccceEEcCCCCCCCCCCCeeEEEEECCC
Confidence 3 44332111 12368999888866677888889999999866 2233332211111122256999999887
Q ss_pred CCeEEEEEecCCcEEEEEccCCceeeeeecCCCCccccc-CCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEE
Q 019258 220 RKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTH-SLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAV 298 (343)
Q Consensus 220 ~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~ 298 (343)
+. +-.|+.++-|..||..+.... .+.. ..... . ......|.++...+++. .|+.++.++.|..
T Consensus 368 g~--lWiGt~~~Gl~~~~~~~~~~~-~~~~-~~~~~--~~~l~~~~v~~i~~d~~g~----------~lWigt~~~Gl~~ 431 (795)
T 4a2l_A 368 KN--LWIGTNDGGLNLYNPITQRFT-SYTL-QEDES--ARGIGSNNIKAVYVDEKKS----------LVYIGTHAGGLSI 431 (795)
T ss_dssp SC--EEEEESSSCEEEECTTTCCEE-EECC-C--------CCSCSCEEEEEEETTTT----------EEEEEETTTEEEE
T ss_pred CC--EEEEECCCCeEEEcCCCCcEE-EEec-CCCCc--ccCCCCccEEEEEEcCCCC----------EEEEEeCcCceeE
Confidence 64 346888888999998764322 1110 00000 0 01235688888876543 2788888888999
Q ss_pred EecCCCccccccc------ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 299 VEQGEEPFELLAE------PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 299 ~~~~~~~~~~~~~------~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
++........+.. ...|.++..++ +|...+++ . +.+++++
T Consensus 432 ~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt-~-~Gl~~~~ 477 (795)
T 4a2l_A 432 LHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGT-L-SALVRFN 477 (795)
T ss_dssp EETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEE-S-SCEEEEE
T ss_pred EeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEe-c-CceeEEe
Confidence 9876443332221 24578888776 34544444 3 4566665
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.21 E-value=0.0003 Score=58.78 Aligned_cols=190 Identities=12% Similarity=0.058 Sum_probs=115.8
Q ss_pred eEEEEec-CCEEEEEeCCC--cEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCe
Q 019258 118 ISGVDLT-GSECVSVGEDG--RVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPV 194 (343)
Q Consensus 118 v~~~~~~-~~~~~s~s~dg--~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~ 194 (343)
...+.+. +..+.+.+.+| .|+.+|+.+++...+. ......---.+........+..-.++.+.++|..+ .+.+
T Consensus 45 tqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~-~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t---~~~~ 120 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQI-ELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN---LRQV 120 (262)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT---CCEE
T ss_pred cceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEE-ecCCccceeEEEEeCCEEEEEEeeCCEEEEEECcc---CcEE
Confidence 4677777 65667777776 8999999998644444 33322012335544455555555699999999988 7778
Q ss_pred eEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCcc-ccEEEEEEeec
Q 019258 195 LQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSE-SEVWEVQYDCH 273 (343)
Q Consensus 195 ~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~ 273 (343)
.++.... . + ..++ +++..++++- .+++|.++|..+.+....+. +. ..+.. ..++.+.|. +
T Consensus 121 ~ti~~~~--e----G--~glt--~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~-V~------~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 121 RSFNYDG--E----G--WGLT--HNDQYLIMSD-GTPVLRFLDPESLTPVRTIT-VT------AHGEELPELNELEWV-D 181 (262)
T ss_dssp EEEECSS--C----C--CCEE--ECSSCEEECC-SSSEEEEECTTTCSEEEEEE-CE------ETTEECCCEEEEEEE-T
T ss_pred EEEECCC--C----c--eEEe--cCCCEEEEEC-CCCeEEEEcCCCCeEEEEEE-ec------cCCccccccceeEEE-C
Confidence 7776422 1 2 2333 4456666553 46789999998755433332 10 01111 335667776 3
Q ss_pred CCCCcCCCCCccceEEEecCCeEEEEecCCCc-cc------cccc-------ccccceeeecCCCCCeeEEccCCceEEE
Q 019258 274 TKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FE------LLAE-------PCAINSFDIDPQNPSDVICSLEWESIAI 339 (343)
Q Consensus 274 ~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~------~~~~-------~~~i~s~~~~~~~~~~l~~~~~~~~i~~ 339 (343)
+. ..+..-.++.|.++|..... .. +... ....|.++++|+.....++|--|..++-
T Consensus 182 G~----------lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~e 251 (262)
T 3nol_A 182 GE----------IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFE 251 (262)
T ss_dssp TE----------EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred CE----------EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEE
Confidence 32 33444467788888874322 11 1111 1245999999977788888888988774
Q ss_pred E
Q 019258 340 V 340 (343)
Q Consensus 340 ~ 340 (343)
.
T Consensus 252 v 252 (262)
T 3nol_A 252 I 252 (262)
T ss_dssp E
T ss_pred E
Confidence 3
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.20 E-value=0.00039 Score=57.56 Aligned_cols=199 Identities=10% Similarity=0.037 Sum_probs=123.6
Q ss_pred ccccCCccc--ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCee--EEEccCCCeEE
Q 019258 11 QVHRFPQSK--YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRIS--SLSTSHQSLVA 86 (343)
Q Consensus 11 ~~~~~~~~~--~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~--~v~~~~~~~l~ 86 (343)
.+..+||+. .+-.+.|.+ +.++.+++.++ ..+|+..|+... +.+.....+.... .+....+.++.
T Consensus 11 v~~~~phd~~~ftqGL~~~~-----~~LyestG~~g---~S~v~~vD~~tg---kv~~~~~l~~~~fgeGi~~~~~~ly~ 79 (243)
T 3mbr_X 11 VVKRYPHDTTAFTEGLFYLR-----GHLYESTGETG---RSSVRKVDLETG---RILQRAEVPPPYFGAGIVAWRDRLIQ 79 (243)
T ss_dssp EEEEEECCTTCCEEEEEEET-----TEEEEEECCTT---SCEEEEEETTTC---CEEEEEECCTTCCEEEEEEETTEEEE
T ss_pred EEEEcCCCCccccccEEEEC-----CEEEEECCCCC---CceEEEEECCCC---CEEEEEeCCCCcceeEEEEeCCEEEE
Confidence 455677765 466888887 56677666553 235888898553 2333444444443 33444455555
Q ss_pred EEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc---cceEEE
Q 019258 87 ASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL---VGFNCV 163 (343)
Q Consensus 87 ~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~---~~v~~~ 163 (343)
+.-.++.+.+||..+.+.+...... +.-..++..++.++.+..++.|.++|..+.+...++...... ..+..+
T Consensus 80 ltw~~~~v~v~D~~tl~~~~ti~~~----~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeL 155 (243)
T 3mbr_X 80 LTWRNHEGFVYDLATLTPRARFRYP----GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNEL 155 (243)
T ss_dssp EESSSSEEEEEETTTTEEEEEEECS----SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred EEeeCCEEEEEECCcCcEEEEEeCC----CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceee
Confidence 5567899999999876665544432 122566667665555566889999999987544443322111 135667
Q ss_pred EeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCC------CCcccCeEEEEEcCCCCeEEEEE
Q 019258 164 KWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQ------GKASGMIHSVDIHPSRKHTCLAG 227 (343)
Q Consensus 164 ~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~v~~~p~~~~~~~sg 227 (343)
.|..+..++..-.+..|.+.|.++ ++.+..+....... .....-.+.|+++|.+..++++|
T Consensus 156 e~~~G~lyanvw~s~~I~vIDp~t---G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 156 EWVNGELLANVWLTSRIARIDPAS---GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEETTEEEEEETTTTEEEEECTTT---CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEeCCEEEEEECCCCeEEEEECCC---CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 776555555444688999999998 77766655331100 01114579999999988888776
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.20 E-value=0.0014 Score=55.17 Aligned_cols=191 Identities=7% Similarity=-0.066 Sum_probs=112.7
Q ss_pred CeEEEEec--CC-EEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCE-EEEEeCCCcEEEEEccccCCC
Q 019258 117 PISGVDLT--GS-ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTE-FVTGGFGYGLQWWDLRRAGSG 191 (343)
Q Consensus 117 ~v~~~~~~--~~-~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~t~~~d~~i~iwd~~~~~~~ 191 (343)
...++.++ ++ .+++-..++.|..++..... ........- .....+++.+ .+. +++-...+.|.++|+..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g---- 110 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-PTTIIRQDL-GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG---- 110 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-CEEEECTTC-CCEEEEEEETTTTEEEEEETTTTEEEEEETTS----
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCC-cEEEEECCC-CCccEEEEEecCCeEEEEECCCCEEEEEEcCC----
Confidence 45778887 44 44555667899999997753 344433221 2578899987 444 44555578999999854
Q ss_pred CCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEec--CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEE
Q 019258 192 GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS--SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQ 269 (343)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 269 (343)
.....+.... . .....++++|++..++++... .+.|..+++... ....+. ......-..++
T Consensus 111 ~~~~~~~~~~----~--~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~----------~~~~~~P~gia 173 (267)
T 1npe_A 111 TQRRVLFDTG----L--VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILA----------QDNLGLPNGLT 173 (267)
T ss_dssp CSCEEEECSS----C--SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEE----------CTTCSCEEEEE
T ss_pred CCEEEEEECC----C--CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEE----------ECCCCCCcEEE
Confidence 2222222111 1 346899999976677666544 478888887542 222222 11123567899
Q ss_pred EeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-ccccccccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 270 YDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLAEPCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 270 ~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
++|++.. ..++....+.|+.++..... ..+.........++++. +...++-...+.|++++
T Consensus 174 ~d~~~~~---------lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~--~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 174 FDAFSSQ---------LCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYG--KNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp EETTTTE---------EEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEET--TEEEEEETTTTEEEEEE
T ss_pred EcCCCCE---------EEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeC--CEEEEEECCCCeEEEEe
Confidence 9998764 45566677899998875322 22222211224555553 24444444556787765
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.12 E-value=0.00052 Score=66.38 Aligned_cols=161 Identities=12% Similarity=0.076 Sum_probs=92.9
Q ss_pred CCCeEEEEcCCCcEEEEEccCceeeeeeccC-C-ccccCeE-EEEecCCEEEEEe------CCCcEEEEECCCCceEEEE
Q 019258 81 HQSLVAASTLSGSLHVLSSAMQVLLSVDENS-G-FHVGPIS-GVDLTGSECVSVG------EDGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 81 ~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~-~-~h~~~v~-~~~~~~~~~~s~s------~dg~v~~wd~~~~~~~~~~ 151 (343)
.+..+++++.|+.|..+|..+++.+-..... . .....+. +..+.+..++.++ .+|.|..||..+++..-+.
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 3678899999999999999866654222211 0 0001111 1112244444443 3789999999998654444
Q ss_pred EcCC-Cc----------------------------cceEEEEeCC-CCEEEEEeCCCc-------------------EEE
Q 019258 152 YDGN-GL----------------------------VGFNCVKWAS-PTEFVTGGFGYG-------------------LQW 182 (343)
Q Consensus 152 ~~~~-~~----------------------------~~v~~~~~~~-~~~l~t~~~d~~-------------------i~i 182 (343)
.... .. .....+.+.+ .+.+..+..++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 3211 00 0112467777 677777777653 999
Q ss_pred EEccccCCCCCeeEEecccCC-CCC-cccCeEEEEEcCCCC--eEEEEEecCCcEEEEEccCCcee
Q 019258 183 WDLRRAGSGGPVLQFKGNFGS-QGK-ASGMIHSVDIHPSRK--HTCLAGGSSGTVFAWDLRWQQQS 244 (343)
Q Consensus 183 wd~~~~~~~~~~~~~~~~~~~-~~~-~~~~i~~v~~~p~~~--~~~~sg~~dg~v~iwd~~~~~~~ 244 (343)
+|.++ ++.+..+...... ... ...+....+...++. ..++.++.+|.++++|.++++..
T Consensus 280 lD~~T---G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 280 VNADT---GEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EETTT---CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEccC---CceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 99998 7877776542110 000 001222222222332 36778999999999999887654
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.10 E-value=0.0009 Score=64.54 Aligned_cols=163 Identities=13% Similarity=0.080 Sum_probs=95.0
Q ss_pred CCCeEEEEcCCCcEEEEEccCceeeeeeccC-Cc-cccCeE-EEEecCCEEEEEeC------CCcEEEEECCCCceEEEE
Q 019258 81 HQSLVAASTLSGSLHVLSSAMQVLLSVDENS-GF-HVGPIS-GVDLTGSECVSVGE------DGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 81 ~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~-~~-h~~~v~-~~~~~~~~~~s~s~------dg~v~~wd~~~~~~~~~~ 151 (343)
.+..+++++.|+.+..+|..+++.+-..... .. ....+. ...+.+..++.++. +|.|..+|..+++..-+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 3678889999999999999866654322211 00 001111 11122555555443 799999999998655444
Q ss_pred EcCCCc------------------------------cceEEEEeCC-CCEEEEEeCCC-------------------cEE
Q 019258 152 YDGNGL------------------------------VGFNCVKWAS-PTEFVTGGFGY-------------------GLQ 181 (343)
Q Consensus 152 ~~~~~~------------------------------~~v~~~~~~~-~~~l~t~~~d~-------------------~i~ 181 (343)
...... .....+.+++ .+.+..+..++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 321110 0012466777 66777776553 499
Q ss_pred EEEccccCCCCCeeEEecccCCC---CCcccCeEEEEEcCCCC--eEEEEEecCCcEEEEEccCCceeeee
Q 019258 182 WWDLRRAGSGGPVLQFKGNFGSQ---GKASGMIHSVDIHPSRK--HTCLAGGSSGTVFAWDLRWQQQSIVL 247 (343)
Q Consensus 182 iwd~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~v~~~p~~~--~~~~sg~~dg~v~iwd~~~~~~~~~~ 247 (343)
.+|.++ ++....+.....+. ... ....-+....+|. ..++.++.+|.++++|.++++.....
T Consensus 287 AlD~~T---G~~~W~~~~~~~d~wd~~~~-~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 287 ALDPDT---GKYKWHYQETPGDNWDYTST-QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp EECTTT---CCEEEEEESSTTCCSCCCCC-SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEECCC---CCEEEEEecCCCcccccccC-CCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccc
Confidence 999988 77777665322100 000 1122223333442 56788999999999999887664443
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.03 E-value=0.0054 Score=53.09 Aligned_cols=232 Identities=12% Similarity=0.019 Sum_probs=131.6
Q ss_pred eeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCC----------------ccccCeEEEEec--CCEEEEEeCC
Q 019258 74 ISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSG----------------FHVGPISGVDLT--GSECVSVGED 134 (343)
Q Consensus 74 v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~----------------~h~~~v~~~~~~--~~~~~s~s~d 134 (343)
..++++. ++.+++++..++.|..|+.............. .......++.+. ...++.+...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 4567777 66668888889999988776432211110000 011346778876 4567666655
Q ss_pred CcEEEEECCCCceEEEEEc---CCCccceEEEEeCC-CCEEEEEeC------------------CCcEEEEEccccCCCC
Q 019258 135 GRVNLVSVIGGGEFKRVYD---GNGLVGFNCVKWAS-PTEFVTGGF------------------GYGLQWWDLRRAGSGG 192 (343)
Q Consensus 135 g~v~~wd~~~~~~~~~~~~---~~~~~~v~~~~~~~-~~~l~t~~~------------------d~~i~iwd~~~~~~~~ 192 (343)
+.+..+|..++. ...+.. .........+++.+ ...+..+.. ++.|..+|... ++
T Consensus 101 ~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~---~~ 176 (322)
T 2fp8_A 101 YHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST---KE 176 (322)
T ss_dssp TEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT---TE
T ss_pred CCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC---CE
Confidence 668888876542 222211 11111467788887 554444432 26677788654 22
Q ss_pred CeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCc--eeeeeecCCCCcccccCCccccEEEEEE
Q 019258 193 PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ--QSIVLSGVGTGEAVTHSLSESEVWEVQY 270 (343)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 270 (343)
+..+.... ...+.++++|++..++++-+.++.|..||+.... ....+. . ..+ ...|++
T Consensus 177 -~~~~~~~~-------~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~----------~-~~g-P~gi~~ 236 (322)
T 2fp8_A 177 -TTLLLKEL-------HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV----------K-IPN-PGNIKR 236 (322)
T ss_dssp -EEEEEEEE-------SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE----------E-CSS-EEEEEE
T ss_pred -EEEeccCC-------ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE----------e-CCC-CCCeEE
Confidence 22221111 3356799999987777776778899999987421 111111 1 112 567888
Q ss_pred eecCCCCcCCCCCccceEEEec----------CCeEEEEecCCCcccccccc-----cccceeeecCCCCCeeEEccCCc
Q 019258 271 DCHTKSSNISSSRVLPAMFCSE----------DGILAVVEQGEEPFELLAEP-----CAINSFDIDPQNPSDVICSLEWE 335 (343)
Q Consensus 271 ~p~~~~~~~~~~~~~~l~s~s~----------dg~i~~~~~~~~~~~~~~~~-----~~i~s~~~~~~~~~~l~~~~~~~ 335 (343)
.+++. ..++... .+.|..++...+....+..+ ..+.++... ++...++.....
T Consensus 237 d~~G~----------l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~ 304 (322)
T 2fp8_A 237 NADGH----------FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHG 304 (322)
T ss_dssp CTTSC----------EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEE--TTEEEEECSSCS
T ss_pred CCCCC----------EEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEe--CCEEEEeecCCC
Confidence 88765 3333333 46688887754443333322 235556554 346666666677
Q ss_pred eEEEEe
Q 019258 336 SIAIVS 341 (343)
Q Consensus 336 ~i~~~~ 341 (343)
.|.+++
T Consensus 305 ~i~~~~ 310 (322)
T 2fp8_A 305 SVGILV 310 (322)
T ss_dssp EEEEEE
T ss_pred ceEEEe
Confidence 887765
No 243
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.01 E-value=0.00023 Score=63.17 Aligned_cols=269 Identities=9% Similarity=-0.041 Sum_probs=147.6
Q ss_pred CCccccCCcccceeeEEecCCCCCCCCeEEEEeecCC-----CCCCceeeeeCCCCCCCCCCccCCCC--------CCee
Q 019258 9 PPQVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTD-----ADSPSLETHSISLPASLTPHSQWTPP--------TRIS 75 (343)
Q Consensus 9 ~~~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~-----~~~~~l~~w~~~~~~~~~~~~~~~~~--------~~v~ 75 (343)
...+.+++-+..- .+.++| +++++..+..... .+.-.|.++|.... +....++.+ ....
T Consensus 56 ~~v~~~i~vG~~P-~i~~sp----Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~---~vv~~I~v~~~~~~~~g~~P~ 127 (368)
T 1mda_H 56 GVTLGHSLGAFLS-LAVAGH----SGSDFALASTSFARSAKGKRTDYVEVFDPVTF---LPIADIELPDAPRFSVGPRVH 127 (368)
T ss_dssp TEEEEEEEECTTC-EEEECT----TSSCEEEEEEEETTTTSSSEEEEEEEECTTTC---CEEEEEEETTSCSCCBSCCTT
T ss_pred CeEEEEEeCCCCC-ceEECC----CCCEEEEEcccccccccCCCCCEEEEEECCCC---CEEEEEECCCccccccCCCcc
Confidence 3456666666655 789999 7766666653100 00014779998552 223333221 2456
Q ss_pred EEEcc-CCCeEEEEcC--CCcEEE--EEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCC----C
Q 019258 76 SLSTS-HQSLVAASTL--SGSLHV--LSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIG----G 145 (343)
Q Consensus 76 ~v~~~-~~~~l~~~s~--dg~v~v--~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~----~ 145 (343)
.+.++ ++++|+++.. +..+.+ +|... +..... +.+..+... ...+++.+.||.+.+.|+.+ .
T Consensus 128 ~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-----~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 128 IIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-----ASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp SEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-----SSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred eEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-----CCceEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 88888 8888888864 457888 87764 211111 011112223 55677778899999889876 2
Q ss_pred ceEEE----EEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCC-eeEEecccC---CCCCcccCeEEEEEc
Q 019258 146 GEFKR----VYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGP-VLQFKGNFG---SQGKASGMIHSVDIH 217 (343)
Q Consensus 146 ~~~~~----~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~---~~~~~~~~i~~v~~~ 217 (343)
.+... .+.-... +. .......++..+. +.+.+.|+.. .... +..+..... ..+........++++
T Consensus 200 ~~v~~~~t~~i~vg~~-P~---~~~~~~~~~~vs~-~~V~viD~~~--~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s 272 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQ-AA---QANYPGMLVWAVA-SSILQGDIPA--AGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272 (368)
T ss_dssp EECCCCSCTTSCBCSC-CE---EETTTTEEEECBS-SCCEEEECCS--SCCEEECCCCSSCTHHHHTTEEECSSSCEEEE
T ss_pred CeEEEEeeeeeeCCCC-cc---ccccCCEEEEEcC-CEEEEEECCC--CcceEEEEEEeccccccccccccCcceeeEEc
Confidence 11111 0101111 22 2333566666667 9999999865 1111 111111000 000011122237899
Q ss_pred CCCCeEEEEEe-c-------CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEE
Q 019258 218 PSRKHTCLAGG-S-------SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMF 289 (343)
Q Consensus 218 p~~~~~~~sg~-~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s 289 (343)
|++..++++.. . ++.+.++|+.+.+....+. -....+.|.|+|++.. .+++
T Consensus 273 ~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~------------vg~~p~gi~~s~Dg~~---------l~va 331 (368)
T 1mda_H 273 KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS------------NGHDSDAIIAAQDGAS---------DNYA 331 (368)
T ss_dssp TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE------------EEEEECEEEECCSSSC---------EEEE
T ss_pred CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE------------CCCCcceEEECCCCCE---------EEEE
Confidence 99888776544 1 2356699998865433332 1235889999999875 5677
Q ss_pred Ee-cCCeEEEEecCCC-cccccccccccceeeec
Q 019258 290 CS-EDGILAVVEQGEE-PFELLAEPCAINSFDID 321 (343)
Q Consensus 290 ~s-~dg~i~~~~~~~~-~~~~~~~~~~i~s~~~~ 321 (343)
+. .++.|.++|.... ......-...-..+.++
T Consensus 332 ~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~ 365 (368)
T 1mda_H 332 NSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp EETTTTEEEEEESSSCEEEEECCCCSCCCEEECC
T ss_pred ccCCCCeEEEEECCCCcEEEEEECCCCCCEEEee
Confidence 77 6999999997532 22222223334445544
No 244
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.00 E-value=0.0077 Score=53.77 Aligned_cols=221 Identities=6% Similarity=-0.082 Sum_probs=128.5
Q ss_pred CeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CC-EEEEEeCCCcEEEEECCCCceEEEEEcCCCccc
Q 019258 83 SLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GS-ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVG 159 (343)
Q Consensus 83 ~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~-~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~ 159 (343)
..|+.+ ....|+.+++.......+.. ......+++|. ++ .+++-...+.|..+++.... ...+...... .
T Consensus 88 ~~l~~~-~~~~I~~i~~~~~~~~~~~~----~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~~~~~~~~~~-~ 160 (386)
T 3v65_B 88 PVLLFA-NRIDIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-VEEVVSTGLE-S 160 (386)
T ss_dssp CEEEEE-CBSCEEEECTTSCCCEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-EEEEECSSCS-C
T ss_pred ceeEee-cCccceeeccCCCcEEEEec----CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC-cEEEEeCCCC-C
Confidence 344443 34567777776433222222 22346788887 44 44555577889999988763 3344332211 3
Q ss_pred eEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC-CcEEEE
Q 019258 160 FNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS-GTVFAW 236 (343)
Q Consensus 160 v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d-g~v~iw 236 (343)
...+++.+ +..+++-...+.|.+.++.. .....+.... . .....++++|.+..++.+-..+ +.|..+
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg----~~~~~l~~~~----l--~~P~giavdp~~g~ly~td~~~~~~I~r~ 230 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDG----AHRKVLLWQS----L--EKPRAIALHPMEGTIYWTDWGNTPRIEAS 230 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTS----CSCEEEECSS----C--SCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCC----CceEEeecCC----C--CCCcEEEEEcCCCeEEEeccCCCCEEEEE
Confidence 55677775 44556666678888888754 2222222111 1 4478999999888888776666 889999
Q ss_pred EccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-cccccc-ccc
Q 019258 237 DLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLAE-PCA 314 (343)
Q Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~~-~~~ 314 (343)
++... ....+. ...-..-..|+++|++.. ..++-+..+.|+.++..... ..+... ...
T Consensus 231 ~~dG~-~~~~~~----------~~~~~~PnGlavd~~~~~---------lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~ 290 (386)
T 3v65_B 231 SMDGS-GRRIIA----------DTHLFWPNGLTIDYAGRR---------MYWVDAKHHVIERANLDGSHRKAVISQGLPH 290 (386)
T ss_dssp ETTSC-SCEEEE----------CSSCSCEEEEEEEGGGTE---------EEEEETTTTEEEEECTTSCSCEEEECSSCSS
T ss_pred eCCCC-CcEEEE----------ECCCCCeeeEEEeCCCCE---------EEEEECCCCEEEEEeCCCCeeEEEEECCCCC
Confidence 98642 222222 112234678999988774 44555667789988875332 233322 223
Q ss_pred cceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 315 INSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 315 i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
...+++.. +...++-...+.|..+++
T Consensus 291 P~giav~~--~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 291 PFAITVFE--DSLYWTDWHTKSINSANK 316 (386)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEEEET
T ss_pred ceEEEEEC--CEEEEeeCCCCeEEEEEC
Confidence 45666654 244455555667777654
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.99 E-value=0.002 Score=54.21 Aligned_cols=182 Identities=8% Similarity=-0.047 Sum_probs=106.1
Q ss_pred EEEEEeCCCcEEEEECCCCce----EEEEEcCCCccceEEEEeCC-CCEEE-EEeCCCcEEEEEccccCCCCCeeEEecc
Q 019258 127 ECVSVGEDGRVNLVSVIGGGE----FKRVYDGNGLVGFNCVKWAS-PTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGN 200 (343)
Q Consensus 127 ~~~s~s~dg~v~~wd~~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~l~-t~~~d~~i~iwd~~~~~~~~~~~~~~~~ 200 (343)
.|+.+.. +.|..++++.... ....+..... ....+++++ .+.+. +-...+.|..+|+.. .. ...+...
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~-~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g---~~-~~~~~~~ 76 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAK-VIIGLAFDCVDKVVYWTDISEPSIGRASLHG---GE-PTTIIRQ 76 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEE-EEEEEEEETTTTEEEEEETTTTEEEEEESSS---CC-CEEEECT
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCC-cEEEEEEecCCCEEEEEECCCCEEEEEecCC---CC-cEEEEEC
Confidence 3444333 4688888765421 0112211111 478899988 55444 444578999999865 33 2333211
Q ss_pred cCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCC
Q 019258 201 FGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNIS 280 (343)
Q Consensus 201 ~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~ 280 (343)
. . .....++++|.+..++++...++.|.++|+.... ...+. .........++++|++.
T Consensus 77 ~----~--~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~----------~~~~~~P~~i~vd~~~g----- 134 (267)
T 1npe_A 77 D----L--GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLF----------DTGLVNPRGIVTDPVRG----- 134 (267)
T ss_dssp T----C--CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEE----------CSSCSSEEEEEEETTTT-----
T ss_pred C----C--CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEE----------ECCCCCccEEEEeeCCC-----
Confidence 1 1 3478999999877888887788899999986422 22222 11123457899999766
Q ss_pred CCCccceEEEec---CCeEEEEecCCCcccccc-c-ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 281 SSRVLPAMFCSE---DGILAVVEQGEEPFELLA-E-PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 281 ~~~~~~l~s~s~---dg~i~~~~~~~~~~~~~~-~-~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
.|+.+.. .+.|+.++........+. . ....+.++++++.+...++-...+.|++++
T Consensus 135 -----~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 135 -----NLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp -----EEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred -----EEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 3444433 468888776543322222 2 234678899884333445555567888765
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.98 E-value=0.00072 Score=61.00 Aligned_cols=188 Identities=13% Similarity=0.109 Sum_probs=110.9
Q ss_pred EEEEEeCCCcEEEEECCCC---ceEEEEEc------CCCccceEEEEeCCCCEEEEEeCC------CcEEEEEccccCCC
Q 019258 127 ECVSVGEDGRVNLVSVIGG---GEFKRVYD------GNGLVGFNCVKWASPTEFVTGGFG------YGLQWWDLRRAGSG 191 (343)
Q Consensus 127 ~~~s~s~dg~v~~wd~~~~---~~~~~~~~------~~~~~~v~~~~~~~~~~l~t~~~d------~~i~iwd~~~~~~~ 191 (343)
.++++-.+++|.++|+.+. .++...++ ......-..+...|...++++..+ +.|.+.|..+ .
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T---~ 174 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYS---F 174 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTT---C
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCC---C
Confidence 4556778899999999643 13444442 111113455666784477777666 7899999988 6
Q ss_pred CCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe-------------------cCCcEEEEEccCCceeeeeecCCC
Q 019258 192 GPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG-------------------SSGTVFAWDLRWQQQSIVLSGVGT 252 (343)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~-------------------~dg~v~iwd~~~~~~~~~~~~~~~ 252 (343)
+.+.++....... ..-..+.|+|.+..+ ++.. .+.+|.+||+.+.+....+. .+
T Consensus 175 ~v~~~~~~~~~~~----~~~Yd~~~~p~~~~m-vsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~-vg- 247 (462)
T 2ece_A 175 EPLGKWEIDRGDQ----YLAYDFWWNLPNEVL-VSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT-LG- 247 (462)
T ss_dssp CEEEECCSBCTTC----CCCCCEEEETTTTEE-EECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE-SC-
T ss_pred eEEEEEccCCCCc----cccceEEECCCCCEE-EEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe-cC-
Confidence 7666665332111 224458889988744 4442 36899999998753332322 11
Q ss_pred CcccccCCccccEEEEEE--eecCCCCcCCCCCccceEEEe-----cCCeEEEEecCCCcc------c--------ccc-
Q 019258 253 GEAVTHSLSESEVWEVQY--DCHTKSSNISSSRVLPAMFCS-----EDGILAVVEQGEEPF------E--------LLA- 310 (343)
Q Consensus 253 ~~~~~~~~h~~~v~~v~~--~p~~~~~~~~~~~~~~l~s~s-----~dg~i~~~~~~~~~~------~--------~~~- 310 (343)
. ....-..|.| +|++.. ..+++- .+++|.+|....... . .+.
T Consensus 248 ------~-~g~~P~~i~f~~~Pdg~~---------aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 248 ------E-ENRMALELRPLHDPTKLM---------GFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp ------T-TEEEEEEEEECSSTTCCE---------EEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCG
T ss_pred ------C-CCCccceeEeeECCCCCE---------EEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccc
Confidence 1 1233456666 998874 444555 667887765432110 0 000
Q ss_pred --c-----ccccceeeecCCCCCeeEEccC-CceEEEEe
Q 019258 311 --E-----PCAINSFDIDPQNPSDVICSLE-WESIAIVS 341 (343)
Q Consensus 311 --~-----~~~i~s~~~~~~~~~~l~~~~~-~~~i~~~~ 341 (343)
. ......+.+++ +|++|-.+.. .+.|.+++
T Consensus 312 ~~~~f~~~~~~pa~I~lS~-DGrfLYVSnrg~d~Vavfd 349 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISL-DDKFLYLSLWGIGEVRQYD 349 (462)
T ss_dssp GGGGGTEECCCCCCEEECT-TSCEEEEEETTTTEEEEEE
T ss_pred cccccccCCCceeEEEECC-CCCEEEEEeCCCCEEEEEE
Confidence 0 13467888998 5677766654 35777765
No 247
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.96 E-value=0.0018 Score=62.38 Aligned_cols=141 Identities=12% Similarity=-0.013 Sum_probs=83.9
Q ss_pred cEEEEECCCCceEEEEEcCCCc-------cceEEEEeCC-C---CEEEEEeCCCcEEEEEccccCCCCCeeEEecccCC-
Q 019258 136 RVNLVSVIGGGEFKRVYDGNGL-------VGFNCVKWAS-P---TEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGS- 203 (343)
Q Consensus 136 ~v~~wd~~~~~~~~~~~~~~~~-------~~v~~~~~~~-~---~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~- 203 (343)
.|..+|.++++..-.....+.. .....+.... + ..++.++.+|.+.++|.++ ++.+..+......
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t---G~~l~~~~~~~~~~ 360 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN---GKFISAKNFVPVNW 360 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT---CCEEEEEESSCCSS
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC---CCEeccccccccCc
Confidence 5999999998644333222110 0111122111 2 5688888999999999988 7776655421100
Q ss_pred -CC--CcccC------------------------eEEEEEcCCCCeEEEEEec---------------------------
Q 019258 204 -QG--KASGM------------------------IHSVDIHPSRKHTCLAGGS--------------------------- 229 (343)
Q Consensus 204 -~~--~~~~~------------------------i~~v~~~p~~~~~~~sg~~--------------------------- 229 (343)
.+ ....+ -..++++|+...++ +...
T Consensus 361 ~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~y-v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 439 (677)
T 1kb0_A 361 ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVY-LPAQNVPVNLMDDKKWEFNQAGPGKPQSGTG 439 (677)
T ss_dssp EEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEE-EEEEECCCEEEECTTCCTTCCCTTSTTGGGT
T ss_pred ccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEE-EeChhcceeeecccccccccccccccccccc
Confidence 00 00000 12567888765444 3322
Q ss_pred ----------------CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecC
Q 019258 230 ----------------SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSED 293 (343)
Q Consensus 230 ----------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~d 293 (343)
.|.|..||+++++....+. +..+++...+...+. .++.++.|
T Consensus 440 ~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~------------~~~~~~~g~~~~~g~----------~v~~g~~d 497 (677)
T 1kb0_A 440 WNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE------------HVSPWNGGTLTTAGN----------VVFQGTAD 497 (677)
T ss_dssp CCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE------------ESSSCCCCEEEETTT----------EEEEECTT
T ss_pred cccccccccccCCCCCccEEEEEeCCCCcEEeecC------------CCCCCcCcceEeCCC----------EEEEECCC
Confidence 2789999998877665554 233444555666655 67888999
Q ss_pred CeEEEEecC
Q 019258 294 GILAVVEQG 302 (343)
Q Consensus 294 g~i~~~~~~ 302 (343)
|.++.||..
T Consensus 498 g~l~a~D~~ 506 (677)
T 1kb0_A 498 GRLVAYHAA 506 (677)
T ss_dssp SEEEEEETT
T ss_pred CcEEEEECC
Confidence 999999975
No 248
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.89 E-value=0.0016 Score=58.95 Aligned_cols=136 Identities=15% Similarity=-0.007 Sum_probs=87.3
Q ss_pred CcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEe----------CCCcEEEEEccccCCCCCeeEEecccCC
Q 019258 135 GRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGG----------FGYGLQWWDLRRAGSGGPVLQFKGNFGS 203 (343)
Q Consensus 135 g~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 203 (343)
+.|.+.|+.+.+ +...+..... + .+.++| ++.+..+. .++.|.++|..+ .+.+.++......
T Consensus 99 ~~VsVID~~t~~-vv~~I~vG~~-P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t---~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGSTGR-ILGMTDGGFL-P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT---FLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTTTE-EEEEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT---CCEEEEEEETTCC
T ss_pred CeEEEEECCCCE-EEEEEECCCC-C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC---CcEEEEEECCCcc
Confidence 799999999985 4444443333 4 899999 55555554 477999999988 6777666532000
Q ss_pred CCCcccCeEEEEEcCCCCeEEEEEec-CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCC
Q 019258 204 QGKASGMIHSVDIHPSRKHTCLAGGS-SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSS 282 (343)
Q Consensus 204 ~~~~~~~i~~v~~~p~~~~~~~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~ 282 (343)
+.........+.++|++.+++++... ++.|.+.|+.+.+....+. .. + . ....|++..
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~----------v~--g-~--~~~~p~g~~------ 230 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD----------VP--D-C--YHIFPASPT------ 230 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE----------CC--S-E--EEEEEEETT------
T ss_pred ccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE----------cC--C-c--eeeccCCCc------
Confidence 00000224578999999888766543 6889999999865443333 11 1 1 334555544
Q ss_pred CccceEEEecCCeEEEEec
Q 019258 283 RVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 283 ~~~~l~s~s~dg~i~~~~~ 301 (343)
.+++.+.||++...+.
T Consensus 231 ---~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 231 ---VFYMNCRDGSLARVDF 246 (426)
T ss_dssp ---EEEEEETTSSEEEEEC
T ss_pred ---EEEEEcCCCCEEEEEC
Confidence 6677778888777665
No 249
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.83 E-value=0.012 Score=50.79 Aligned_cols=220 Identities=8% Similarity=-0.062 Sum_probs=126.6
Q ss_pred EEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CC-EEEEEeCCCcEEEEECCC---CceEEEEEcCCCcc
Q 019258 85 VAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GS-ECVSVGEDGRVNLVSVIG---GGEFKRVYDGNGLV 158 (343)
Q Consensus 85 l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~-~~~s~s~dg~v~~wd~~~---~~~~~~~~~~~~~~ 158 (343)
|+.+. ...|+..++...+...+.. ......+++|+ ++ .+++-...+.|..+++.. +.....+....-.
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~----~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~- 77 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ- 77 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS-
T ss_pred EEEEC-CCeEEEEECCCcceEehhc----CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCC-
Confidence 34433 3468888887543333322 22356788887 44 455556678999999876 1222333322211
Q ss_pred ceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC-CcEEE
Q 019258 159 GFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS-GTVFA 235 (343)
Q Consensus 159 ~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d-g~v~i 235 (343)
....+++.+ ++.+++-...+.|.+.|+.. .....+..... .....++++|.+..++.+.... +.|..
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g----~~~~~~~~~~~------~~P~~iavdp~~g~ly~~d~~~~~~I~~ 147 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFRENG------SKPRAIVVDPVHGFMYWTDWGTPAKIKK 147 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS----SSEEEEEECTT------CCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCC----CceEEEEECCC------CCcceEEeCCCCCEEEEEccCCCCeEEE
Confidence 356777775 44556656788999999754 33333322111 4478999999877787776554 78998
Q ss_pred EEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc-ccccc---
Q 019258 236 WDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF-ELLAE--- 311 (343)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~-~~~~~--- 311 (343)
.++.. .....+. ...-..-..|+++|++.. ..++-+..+.|..++...... .+...
T Consensus 148 ~~~dG-~~~~~~~----------~~~~~~P~gla~d~~~~~---------lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~ 207 (316)
T 1ijq_A 148 GGLNG-VDIYSLV----------TENIQWPNGITLDLLSGR---------LYWVDSKLHSISSIDVNGGNRKTILEDEKR 207 (316)
T ss_dssp EETTS-CCEEEEE----------CSSCSCEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEEEEECTTT
T ss_pred EcCCC-CCeEEEE----------ECCCCCceEEEEeccCCE---------EEEEECCCCeEEEEecCCCceEEEeecCCc
Confidence 88854 2222222 112245678999988774 444556677899988754322 22221
Q ss_pred ccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 312 PCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 312 ~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
......++++. +...++-...+.|..+++
T Consensus 208 ~~~P~giav~~--~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 208 LAHPFSLAVFE--DKVFWTDIINEAIFSANR 236 (316)
T ss_dssp TSSEEEEEEET--TEEEEEETTTTEEEEEET
T ss_pred cCCcEEEEEEC--CEEEEEECCCCeEEEEeC
Confidence 12235667764 245555555667777653
No 250
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.81 E-value=0.0017 Score=62.72 Aligned_cols=160 Identities=9% Similarity=0.059 Sum_probs=97.2
Q ss_pred EEEcc-CCCeEEEEcCCCc-------------------EEEEEccCceeeeeeccCCcc-------ccCeE--EEEecCC
Q 019258 76 SLSTS-HQSLVAASTLSGS-------------------LHVLSSAMQVLLSVDENSGFH-------VGPIS--GVDLTGS 126 (343)
Q Consensus 76 ~v~~~-~~~~l~~~s~dg~-------------------v~v~~~~~~~~~~~~~~~~~h-------~~~v~--~~~~~~~ 126 (343)
.+.+. +.++++.++.++. |..+|..+++.+-..... .| ..+.. .+.+.+.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~-~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTT-PGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESS-TTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecC-CcccccccCCCCcEEEeeccCCc
Confidence 45665 5688888888764 889998866554322211 12 12222 2333343
Q ss_pred ---EEEEEeCCCcEEEEECCCCceEEEEEcCCCc-------------------------------------cceEEEEeC
Q 019258 127 ---ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL-------------------------------------VGFNCVKWA 166 (343)
Q Consensus 127 ---~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~-------------------------------------~~v~~~~~~ 166 (343)
.++.++.+|.+.++|..+++.+......... ..-..++++
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 6888999999999999998644222111100 001125667
Q ss_pred C-CCEEEEEeC---------------------------------------------CCcEEEEEccccCCCCCeeEEecc
Q 019258 167 S-PTEFVTGGF---------------------------------------------GYGLQWWDLRRAGSGGPVLQFKGN 200 (343)
Q Consensus 167 ~-~~~l~t~~~---------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~ 200 (343)
| ...+..... ++.|+.||+.+ ++.+.++...
T Consensus 398 p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t---G~~~W~~~~~ 474 (689)
T 1yiq_A 398 PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK---QQAAWEVPYV 474 (689)
T ss_dssp TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT---TEEEEEEEES
T ss_pred CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC---CCeEeEccCC
Confidence 7 455554421 37799999988 7766666543
Q ss_pred cCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeee
Q 019258 201 FGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248 (343)
Q Consensus 201 ~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~ 248 (343)
. +...-.+...+. +++.|+.||.++.||.++++....+.
T Consensus 475 ~--------~~~~g~~~tagg-lvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 475 T--------IFNGGTLSTAGN-LVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp S--------SCCCCEEEETTT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred C--------CccCccceECCC-EEEEECCCCcEEEEECCCCccceeee
Confidence 2 122223333443 56778999999999999987766664
No 251
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.79 E-value=0.0054 Score=58.89 Aligned_cols=112 Identities=11% Similarity=0.034 Sum_probs=65.4
Q ss_pred CCCeEEEEeecCCC------CCCceeeeeCCCCCCCCCCccCC--CCCCeeEEEcc-CCCeEEEEcC-CCcEEEEEccCc
Q 019258 33 LSKLAVLAIYDTDA------DSPSLETHSISLPASLTPHSQWT--PPTRISSLSTS-HQSLVAASTL-SGSLHVLSSAMQ 102 (343)
Q Consensus 33 ~~~~l~t~s~D~~~------~~~~l~~w~~~~~~~~~~~~~~~--~~~~v~~v~~~-~~~~l~~~s~-dg~v~v~~~~~~ 102 (343)
++++++.|+.+... ....+++||...... ..+..++ +.....++++. ++.+++.|+. +..+.+||....
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w-~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV-SDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB-CCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcE-EeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCC
Confidence 67888999876532 112467888865432 2233222 22233446665 7788888874 568999998754
Q ss_pred eeeeeeccCCccccCeEEEEe-cCCEEEEEe-CC-----CcEEEEECCCCc
Q 019258 103 VLLSVDENSGFHVGPISGVDL-TGSECVSVG-ED-----GRVNLVSVIGGG 146 (343)
Q Consensus 103 ~~~~~~~~~~~h~~~v~~~~~-~~~~~~s~s-~d-----g~v~~wd~~~~~ 146 (343)
+-..+.... ........... .++.++.|+ .+ ..+.+||..+.+
T Consensus 276 ~W~~~~~~~-~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 276 SWIPGPDMQ-VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEECCCCS-SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ceeECCCCC-ccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 333222211 11112234445 488888888 44 568999998763
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.71 E-value=0.0058 Score=57.10 Aligned_cols=188 Identities=12% Similarity=0.035 Sum_probs=119.5
Q ss_pred CCCeEEEE-cCCCcEEEEEccCceeeeeeccCCccccCeEEEEe---c-CCEEEEEe------------------CCCcE
Q 019258 81 HQSLVAAS-TLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDL---T-GSECVSVG------------------EDGRV 137 (343)
Q Consensus 81 ~~~~l~~~-s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~---~-~~~~~s~s------------------~dg~v 137 (343)
++++|+.. ..++.|.+.|+...+...+.... .......+.+ - +++++.++ .++.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip--~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP--NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECS--SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCC--CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 44555444 45778999999876655544322 1224566665 2 77777774 34678
Q ss_pred EEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCC--------------------------------------
Q 019258 138 NLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGY-------------------------------------- 178 (343)
Q Consensus 138 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~-------------------------------------- 178 (343)
.+.|..+.+...++..+. . ...++.++ +..+++++.+.
T Consensus 178 tvID~~t~~v~~qI~Vgg-~--pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-N--LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEEETTTTEEEEEEEESS-C--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEEECCCCeEEEEEEeCC-C--ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 999999875444443322 2 34455666 66666666543
Q ss_pred cEEEEEccccCCCCC-eeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCce-----------eee
Q 019258 179 GLQWWDLRRAGSGGP-VLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ-----------SIV 246 (343)
Q Consensus 179 ~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~-----------~~~ 246 (343)
.|.+.|.+.. .+.. +..+... ...+++.++|+|.++++++-.+.+|.++|+.+... ...
T Consensus 255 ~V~VID~~~~-~~~~~~~~Ipvg--------~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~ 325 (595)
T 1fwx_A 255 GVKVVDGRKE-ASSLFTRYIPIA--------NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA 325 (595)
T ss_dssp TEEEEECSGG-GCCSSEEEEEEE--------SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE
T ss_pred cEEEEeCccc-CCceeEEEEecC--------CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE
Confidence 3666666540 0122 2233211 34778999999999999998999999999986421 111
Q ss_pred eecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 247 LSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 247 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
.. .-...-+.++|+|++ . ..++.-.|+.|..|+...
T Consensus 326 ~v-----------~vG~gP~h~aF~~dG-~---------aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 326 EP-----------ELGLGPLHTAFDGRG-N---------AYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CC-----------BCCSCEEEEEECTTS-E---------EEEEETTTTEEEEEEHHH
T ss_pred Ec-----------CCCCCcceEEECCCC-e---------EEEEEecCCcEEEEEhhH
Confidence 11 112457899999998 5 677888999999999654
No 253
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.71 E-value=0.022 Score=50.07 Aligned_cols=229 Identities=7% Similarity=-0.078 Sum_probs=130.6
Q ss_pred eEEEccCCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CC-EEEEEeCCCcEEEEECCCCceEEEE
Q 019258 75 SSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GS-ECVSVGEDGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 75 ~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~-~~~s~s~dg~v~~wd~~~~~~~~~~ 151 (343)
.|........|+.+ ....|+..++.......+.. ......+++|+ .+ .+++-...+.|..+++.... ...+
T Consensus 37 ~C~~~~~~~~ll~~-~~~~I~~i~~~g~~~~~~~~----~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~-~~~~ 110 (349)
T 3v64_C 37 SCKALGPEPVLLFA-NRIDIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-VEEV 110 (349)
T ss_dssp CEEESSSCCEEEEE-CBSCEEEECTTSCCEEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEE
T ss_pred cccccccCceeEee-cccceEEEeCCCCeeEEeec----CCCceEEEEEeccccEEEEEeccCCceEEEecCCCC-ceEE
Confidence 34443333444444 33457777766433222221 12346888887 44 44555577889999987753 3333
Q ss_pred EcCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEec
Q 019258 152 YDGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS 229 (343)
Q Consensus 152 ~~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~ 229 (343)
....-. ....+++.+ +..+++-...+.|.+.++.. .....+.... . .....++++|.+..++.+-..
T Consensus 111 ~~~~~~-~p~glavd~~~g~ly~~d~~~~~I~~~~~dG----~~~~~l~~~~----l--~~P~~iavdp~~g~ly~td~~ 179 (349)
T 3v64_C 111 VSTGLE-SPGGLAVDWVHDKLYWTDSGTSRIEVANLDG----AHRKVLLWQS----L--EKPRAIALHPMEGTIYWTDWG 179 (349)
T ss_dssp ECSSCS-CCCEEEEETTTTEEEEEETTTTEEEEEETTS----CSCEEEECTT----C--SCEEEEEEETTTTEEEEEECS
T ss_pred EeCCCC-CccEEEEecCCCeEEEEcCCCCeEEEEcCCC----CceEEEEeCC----C--CCcceEEEecCcCeEEEeccC
Confidence 332211 356777776 44556666688999998855 2222222111 1 447899999987788887776
Q ss_pred C-CcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-cc
Q 019258 230 S-GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FE 307 (343)
Q Consensus 230 d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~ 307 (343)
+ +.|..+++... ....+. ...-..-..|+++|++.. ..++-+..+.|+.++..... ..
T Consensus 180 ~~~~I~r~~~dG~-~~~~~~----------~~~~~~PnGla~d~~~~~---------lY~aD~~~~~I~~~~~dG~~~~~ 239 (349)
T 3v64_C 180 NTPRIEASSMDGS-GRRIIA----------DTHLFWPNGLTIDYAGRR---------MYWVDAKHHVIERANLDGSHRKA 239 (349)
T ss_dssp SSCEEEEEETTSC-SCEESC----------CSSCSCEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCEEEEEeCCCC-CcEEEE----------ECCCCCcceEEEeCCCCE---------EEEEECCCCEEEEEeCCCCceEE
Confidence 6 88999988642 222222 111234678999987774 44455667789888865432 23
Q ss_pred cccc-ccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 308 LLAE-PCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 308 ~~~~-~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
+... ......+++.. +...++-...+.|..+++
T Consensus 240 ~~~~~~~~P~giav~~--~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 240 VISQGLPHPFAITVFE--DSLYWTDWHTKSINSANK 273 (349)
T ss_dssp EECSSCSSEEEEEEET--TEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCceEEEEEC--CEEEEecCCCCeEEEEEc
Confidence 3322 22345666643 244444445567766653
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.69 E-value=0.023 Score=49.89 Aligned_cols=177 Identities=6% Similarity=-0.097 Sum_probs=106.3
Q ss_pred eCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEE-EEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCccc
Q 019258 132 GEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEF-VTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASG 209 (343)
Q Consensus 132 s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l-~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (343)
+....|+..++.... ...+..... ....++|++ .+.| ++-...+.|..+++.. .. ...+.... . .
T Consensus 50 ~~~~~I~~i~~~g~~-~~~~~~~~~--~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g---~~-~~~~~~~~----~--~ 116 (349)
T 3v64_C 50 ANRIDIRQVLPHRSE-YTLLLNNLE--NAIALDFHHRRELVFWSDVTLDRILRANLNG---SN-VEEVVSTG----L--E 116 (349)
T ss_dssp ECBSCEEEECTTSCC-EEEEECSCS--CEEEEEEETTTTEEEEEETTTTEEEEEETTS---CS-CEEEECSS----C--S
T ss_pred ecccceEEEeCCCCe-eEEeecCCC--ceEEEEEeccccEEEEEeccCCceEEEecCC---CC-ceEEEeCC----C--C
Confidence 344557777877653 444444333 488999997 4444 4445578888888865 22 23332111 0 3
Q ss_pred CeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEE
Q 019258 210 MIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMF 289 (343)
Q Consensus 210 ~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s 289 (343)
....+++++.+..++.+-...+.|.+.++... ....+. ...-..-..|+++|.+.. ..++
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~-~~~~l~----------~~~l~~P~~iavdp~~g~---------ly~t 176 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA-HRKVLL----------WQSLEKPRAIALHPMEGT---------IYWT 176 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEE----------CTTCSCEEEEEEETTTTE---------EEEE
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCC-ceEEEE----------eCCCCCcceEEEecCcCe---------EEEe
Confidence 35688999877788888888889999998653 222222 112244688999987663 4444
Q ss_pred EecC-CeEEEEecCCCccccc-cc-ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 290 CSED-GILAVVEQGEEPFELL-AE-PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 290 ~s~d-g~i~~~~~~~~~~~~~-~~-~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
-... +.|+..+.+......+ .. -..-+.++++++.+...++=...+.|+.++
T Consensus 177 d~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 177 DWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp ECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 4455 7888887654333322 22 234578888874434444444455676654
No 255
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.63 E-value=0.033 Score=49.91 Aligned_cols=222 Identities=8% Similarity=-0.056 Sum_probs=126.1
Q ss_pred CeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCE-EEEEeCCCcEEEEECCCCc---eEEEEEcCCC
Q 019258 83 SLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSE-CVSVGEDGRVNLVSVIGGG---EFKRVYDGNG 156 (343)
Q Consensus 83 ~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~-~~s~s~dg~v~~wd~~~~~---~~~~~~~~~~ 156 (343)
.+|+.+ ....|+..++.......+.. ....+.+++|+ ++. +++-...+.|..+++.... ....+....-
T Consensus 84 ~~ll~~-~~~~I~~i~l~~~~~~~~~~----~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 84 AYLFFT-NRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp CEEEEE-ETTEEEEECTTSCSCEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred ceeEEe-ccceeEEEccCCcceeEecc----ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 344443 34678887877443332222 33467888887 444 4455567888888886521 1233333222
Q ss_pred ccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEec-CCcE
Q 019258 157 LVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS-SGTV 233 (343)
Q Consensus 157 ~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~-dg~v 233 (343)
.....+++.+ .+.+++-...+.|.+.|+.. .....+..... .....|+++|.+..++.+-.. .+.|
T Consensus 159 -~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g----~~~~~l~~~~~------~~P~~iavdp~~g~ly~td~~~~~~I 227 (400)
T 3p5b_L 159 -QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFRENG------SKPRAIVVDPVHGFMYWTDWGTPAKI 227 (400)
T ss_dssp -SCEEEEEEETTTTEEEEEETTTTEEEEECTTT----CSEEEEEECSS------CCEEEEEEETTTTEEEEEECSSSCCE
T ss_pred -CCcccEEEEecCCceEEEECCCCeEEEEeCCC----CceEEEEeCCC------CCcceEEEecccCeEEEEeCCCCCEE
Confidence 2477788776 45555556688899888755 33333322111 447899999987777776543 4789
Q ss_pred EEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc-cccccc
Q 019258 234 FAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF-ELLAEP 312 (343)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~-~~~~~~ 312 (343)
...++.. .....+. ...-..-..|+++|++.. ..++-+..+.|+..+...... .+....
T Consensus 228 ~~~~~dG-~~~~~~~----------~~~l~~P~glavd~~~~~---------lY~aD~~~~~I~~~d~dG~~~~~~~~~~ 287 (400)
T 3p5b_L 228 KKGGLNG-VDIYSLV----------TENIQWPNGITLDLLSGR---------LYWVDSKLHSISSIDVNGGNRKTILEDE 287 (400)
T ss_dssp EEEETTS-CSCEEEE----------CSSCSCEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCCCEEEEECS
T ss_pred EEEeCCC-CccEEEE----------ECCCCceEEEEEEeCCCE---------EEEEECCCCEEEEEeCCCCccEEEEeCC
Confidence 9998864 2322332 112245688999988773 334445667898888754332 222221
Q ss_pred ---cccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 313 ---CAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 313 ---~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
....++++.. +...++-...+.|..+++
T Consensus 288 ~~l~~P~gl~v~~--~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 288 KRLAHPFSLAVFE--DKVFWTDIINEAIFSANR 318 (400)
T ss_dssp STTSSEEEEEEET--TEEEEEESSSCSEEEEES
T ss_pred CCCCCCEEEEEeC--CEEEEecCCCCeEEEEEc
Confidence 2234666654 234444445567776653
No 256
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.60 E-value=0.021 Score=55.66 Aligned_cols=198 Identities=11% Similarity=0.005 Sum_probs=105.7
Q ss_pred ceeeEEec-CCCCCCCCeEEEEeecCCCCCCceeeeeCCCC-CCCCCCccCCCCCCeeEEEcc-CCCeEEEEcCC-----
Q 019258 20 YIDAVRWL-PPLSPLSKLAVLAIYDTDADSPSLETHSISLP-ASLTPHSQWTPPTRISSLSTS-HQSLVAASTLS----- 91 (343)
Q Consensus 20 ~i~~v~w~-p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~-~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s~d----- 91 (343)
.+...+|+ | +++++|-+..........|+++++.+. .. +.. ..+....++.|+ +++.|+....+
T Consensus 175 ~~~~~~~S~P----DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~---l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKPAPP----EHDLVAFSVDMSGNEVYTIEFKRISDPSQT---IAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEECTT----TTCEEEEEEESSSSSCEEEEEEETTCTTCC---CCC-CEEEECSCCEECSSTTEEEEEEECTTCCE
T ss_pred EEeeeEecCC----CCCEEEEEEeCCCCceEEEEEEECCCCCEe---CCc-cccCceeeEEEecCCCEEEEEEECCCCCC
Confidence 57788999 8 888888665432112235889999654 31 110 111224567888 66666666554
Q ss_pred CcEEEEEccCce--eeeeeccCCccccCeEEEEec--CCEEEEEe---CCCcEEEEECCCCc-eE--EEEEcCCCccceE
Q 019258 92 GSLHVLSSAMQV--LLSVDENSGFHVGPISGVDLT--GSECVSVG---EDGRVNLVSVIGGG-EF--KRVYDGNGLVGFN 161 (343)
Q Consensus 92 g~v~v~~~~~~~--~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s---~dg~v~~wd~~~~~-~~--~~~~~~~~~~~v~ 161 (343)
..|.++++...+ ...+... .+..-...+.|+ ++.|+..+ ....|.++|+.++. .. ..+...... ...
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~--~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~ 323 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEE--HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG-VRY 323 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEEC--CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT-CCE
T ss_pred CEEEEEECCCCchhcEEEEec--CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC-ceE
Confidence 246666665432 1222221 122345677888 77776544 23457788887642 23 333332322 466
Q ss_pred EEEeCCCCEEEEEeC-C--C--cEEEEEccccCCCCCeeE-EecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcE--
Q 019258 162 CVKWASPTEFVTGGF-G--Y--GLQWWDLRRAGSGGPVLQ-FKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTV-- 233 (343)
Q Consensus 162 ~~~~~~~~~l~t~~~-d--~--~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v-- 233 (343)
.+.|+.+..|+..+. + + .|..+|+.. ...... +..+.. . ..+..+.+. +..++++...+|..
T Consensus 324 s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~---~~~~~~~li~~~~-~----~~l~~~~~~--~~~lv~~~~~~g~~~l 393 (751)
T 2xe4_A 324 DVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ---PSDWSHVLVDHSE-D----VFMESIAVR--SNYLVVAGRRAGLTRI 393 (751)
T ss_dssp EEEEETTTEEEEEECTTTCTTCEEEEEETTS---TTCCCCEEECCCS-S----EEEEEEEEC--SSEEEEEEEETTEEEE
T ss_pred EEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC---cccceeeEECCCC-C----cEEEEEEEE--CCEEEEEEEeCCEEEE
Confidence 677666555544443 3 3 455566543 122222 222210 0 235556654 46788888888864
Q ss_pred EEEEc
Q 019258 234 FAWDL 238 (343)
Q Consensus 234 ~iwd~ 238 (343)
.++|+
T Consensus 394 ~~~dl 398 (751)
T 2xe4_A 394 WTMMA 398 (751)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 45564
No 257
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.56 E-value=0.033 Score=48.12 Aligned_cols=180 Identities=9% Similarity=-0.094 Sum_probs=102.8
Q ss_pred CCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CC-EEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccC
Q 019258 133 EDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PT-EFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGM 210 (343)
Q Consensus 133 ~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (343)
....|+..|+.+.. ...+..... ...++.|++ .+ .+++-...+.|..+|+.....+.....+.... . ..
T Consensus 8 ~~~~I~~i~~~~~~-~~~~~~~~~--~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~----~--~~ 78 (316)
T 1ijq_A 8 NRHEVRKMTLDRSE-YTSLIPNLR--NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD----I--QA 78 (316)
T ss_dssp CBSSEEEEETTSCC-CEEEECSCS--SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS----C--SC
T ss_pred CCCeEEEEECCCcc-eEehhcCCC--ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC----C--CC
Confidence 34568999998764 444443333 588999987 44 44555557899999875400001222222111 0 23
Q ss_pred eEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEE
Q 019258 211 IHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFC 290 (343)
Q Consensus 211 i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~ 290 (343)
...+++++.+..++++-..++.|.++|+.. .....+. .........++++|.+.. .+++.
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~----------~~~~~~P~~iavdp~~g~---------ly~~d 138 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLF----------RENGSKPRAIVVDPVHGF---------MYWTD 138 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTS-SSEEEEE----------ECTTCCEEEEEEETTTTE---------EEEEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCC-CceEEEE----------ECCCCCcceEEeCCCCCE---------EEEEc
Confidence 578899887777888877889999999864 3322332 111235678999987663 33443
Q ss_pred ecC-CeEEEEecCCCccccc-cc-ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 291 SED-GILAVVEQGEEPFELL-AE-PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 291 s~d-g~i~~~~~~~~~~~~~-~~-~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
... +.|+..+.+......+ .. -...+.++++++.+...++=...+.|+.++
T Consensus 139 ~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d 192 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 192 (316)
T ss_dssp CSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEe
Confidence 333 6788777654333222 22 234678888874433334444445676654
No 258
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.54 E-value=0.077 Score=51.91 Aligned_cols=237 Identities=11% Similarity=-0.000 Sum_probs=136.2
Q ss_pred CCeeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeec-----------cCCccccCeEEEEec-CCEEEEEeCCCcEEE
Q 019258 72 TRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDE-----------NSGFHVGPISGVDLT-GSECVSVGEDGRVNL 139 (343)
Q Consensus 72 ~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~-----------~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~ 139 (343)
..|.++.......|..|+..+-|.+++.....-..... ........|.++... ...+-.|..++-|..
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~ 337 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINF 337 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEE
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEE
Confidence 46888887656667778775567888876332111110 011234578888887 555666776777999
Q ss_pred EECCCCceEEEEEc--------CCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCe
Q 019258 140 VSVIGGGEFKRVYD--------GNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMI 211 (343)
Q Consensus 140 wd~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i 211 (343)
++..+.. ...... .-....|.++...+.+.+-.|+.++.|..||... . ....+... .......|
T Consensus 338 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~---~-~~~~~~~~---~~~~~~~v 409 (781)
T 3v9f_A 338 ISNAPPT-FHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGK---R-VAIYNKEN---RELLSNSV 409 (781)
T ss_dssp ECSSCCS-CEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTE---E-EEECC--------CCCSBE
T ss_pred eCCCCCc-ceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCC---C-eEEEccCC---CCCCCcce
Confidence 9987652 222211 1112258899888756677788778899999765 1 11111100 01112569
Q ss_pred EEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe
Q 019258 212 HSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS 291 (343)
Q Consensus 212 ~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s 291 (343)
.++...+++. + ..|+.++-+..+|.++... ..+.. . ......|.++...+++ .|+.++
T Consensus 410 ~~i~~d~~g~-l-Wigt~~~Gl~~~~~~~~~~-~~~~~-~-------~~~~~~v~~i~~d~~g-----------~lwigt 467 (781)
T 3v9f_A 410 LCSLKDSEGN-L-WFGTYLGNISYYNTRLKKF-QIIEL-E-------KNELLDVRVFYEDKNK-----------KIWIGT 467 (781)
T ss_dssp EEEEECTTSC-E-EEEETTEEEEEECSSSCEE-EECCS-T-------TTCCCCEEEEEECTTS-----------EEEEEE
T ss_pred EEEEECCCCC-E-EEEeccCCEEEEcCCCCcE-EEecc-C-------CCCCCeEEEEEECCCC-----------CEEEEE
Confidence 9999888764 3 4577777899999865432 12110 0 1124578888877654 466666
Q ss_pred cCCeEEEEecCCCccccccc-------ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 292 EDGILAVVEQGEEPFELLAE-------PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 292 ~dg~i~~~~~~~~~~~~~~~-------~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
. +.|..++........... ...|.++..++ +|...++ +..+.++.++
T Consensus 468 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWig-t~~~Gl~~~~ 521 (781)
T 3v9f_A 468 H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWIG-TFGGGVGIYT 521 (781)
T ss_dssp T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT-TCCEEEE-ESSSCEEEEC
T ss_pred C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcC-CCCEEEE-EcCCCEEEEe
Confidence 6 568888765433222211 24578888776 4444444 4434466554
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.46 E-value=0.097 Score=51.17 Aligned_cols=238 Identities=12% Similarity=0.077 Sum_probs=135.7
Q ss_pred CCeeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEE
Q 019258 72 TRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKR 150 (343)
Q Consensus 72 ~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~ 150 (343)
..|.++.......|..|+.++-+..|+...................|.++... ...+..+..++.|..+|..+++ ...
T Consensus 363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~ 441 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKK-FQI 441 (781)
T ss_dssp SCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCE-EEE
T ss_pred cceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCc-EEE
Confidence 45888877644567777766668888876322111111011234578888877 5556667776779999987763 433
Q ss_pred EEc-CCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEec
Q 019258 151 VYD-GNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS 229 (343)
Q Consensus 151 ~~~-~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~ 229 (343)
... ......|.++...+.+.+..|+. +.|..+|... ++ ...+..... .......|.++...+++. + -.|+.
T Consensus 442 ~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~---~~-~~~~~~~~~-~~~~~~~i~~i~~d~~g~-l-Wigt~ 513 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLAS---KK-VIHHYDTSN-SQLLENFVRSIAQDSEGR-F-WIGTF 513 (781)
T ss_dssp CCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSS---SS-CCEEECTTT-SSCSCSCEEEEEECTTCC-E-EEEES
T ss_pred eccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCC---Ce-EEecccCcc-cccccceeEEEEEcCCCC-E-EEEEc
Confidence 321 11222688988887666777776 6688899866 22 223321110 001125699999998875 3 34666
Q ss_pred CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccccc
Q 019258 230 SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELL 309 (343)
Q Consensus 230 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~ 309 (343)
++-+..||.+... ...+.. . .......|.++...+++. |..++.+|-+..++........+
T Consensus 514 ~~Gl~~~~~~~~~-~~~~~~-~------~~l~~~~i~~i~~d~~g~-----------lWi~T~~Glv~~~d~~~~~~~~~ 574 (781)
T 3v9f_A 514 GGGVGIYTPDMQL-VRKFNQ-Y------EGFCSNTINQIYRSSKGQ-----------MWLATGEGLVCFPSARNFDYQVF 574 (781)
T ss_dssp SSCEEEECTTCCE-EEEECT-T------TTCSCSCEEEEEECTTSC-----------EEEEETTEEEEESCTTTCCCEEE
T ss_pred CCCEEEEeCCCCe-EEEccC-C------CCCCCCeeEEEEECCCCC-----------EEEEECCCceEEECCCCCcEEEc
Confidence 4558889876532 222220 0 011245688888876654 66666666547787654433333
Q ss_pred cc-----ccccceeeecCCCCCeeEEccCCceEEEE
Q 019258 310 AE-----PCAINSFDIDPQNPSDVICSLEWESIAIV 340 (343)
Q Consensus 310 ~~-----~~~i~s~~~~~~~~~~l~~~~~~~~i~~~ 340 (343)
.. ...|.++..++ +|..-++ +..+ |..+
T Consensus 575 ~~~~gl~~~~i~~i~~d~-~g~lW~~-t~~G-l~~~ 607 (781)
T 3v9f_A 575 QRKEGLPNTHIRAISEDK-NGNIWAS-TNTG-ISCY 607 (781)
T ss_dssp CGGGTCSCCCCCEEEECS-SSCEEEE-CSSC-EEEE
T ss_pred cccCCCCCceEEEEEECC-CCCEEEE-cCCc-eEEE
Confidence 22 13578888776 4444444 4443 4444
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.41 E-value=0.049 Score=46.59 Aligned_cols=233 Identities=6% Similarity=0.017 Sum_probs=124.8
Q ss_pred CccCCCCCCeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCC-C-cEEE
Q 019258 65 HSQWTPPTRISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGED-G-RVNL 139 (343)
Q Consensus 65 ~~~~~~~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~d-g-~v~~ 139 (343)
+..++.......++|. ++.++++-..++.|..|+.... ....... .+...++.+. ++.+++.... + .|..
T Consensus 25 ~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~----~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 25 ITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV----EGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC----SSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC----CCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 3344444567788998 6666666667888888876632 2221111 1356788887 6655554433 2 4666
Q ss_pred EECCCCceEEEEEcCCCccceEEEEeCCCCE-EEEEeCCCcEEEEEccccCCCC-CeeEEecc----cCCCCCcccCeEE
Q 019258 140 VSVIGGGEFKRVYDGNGLVGFNCVKWASPTE-FVTGGFGYGLQWWDLRRAGSGG-PVLQFKGN----FGSQGKASGMIHS 213 (343)
Q Consensus 140 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~t~~~d~~i~iwd~~~~~~~~-~~~~~~~~----~~~~~~~~~~i~~ 213 (343)
+|..+++ ...+...........++..+... +++-..++.|..+|... +. .+...... ...... ...+.
T Consensus 100 ~d~~~g~-~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~---~~~~v~~~~~~~~~~~~~~~~--~~png 173 (306)
T 2p4o_A 100 LVKSDGT-VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ---PSGSIWLEHPMLARSNSESVF--PAANG 173 (306)
T ss_dssp EECTTSC-EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT---TEEEEEEECGGGSCSSTTCCS--CSEEE
T ss_pred EcCCCCe-EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC---CcEeEEEECCccccccccCCC--CcCCC
Confidence 7777764 43333222211234455445444 44444588888888754 21 11111100 000001 23455
Q ss_pred EEEcCCCCeEEEEEecCCcEEEEEccC-Cce-eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe
Q 019258 214 VDIHPSRKHTCLAGGSSGTVFAWDLRW-QQQ-SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS 291 (343)
Q Consensus 214 v~~~p~~~~~~~sg~~dg~v~iwd~~~-~~~-~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s 291 (343)
+ +|++..++++-...++|..+|+.. +.. ...... . ......|++++++. ..++..
T Consensus 174 i--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~---------~--~~~P~gi~vd~dG~----------l~va~~ 230 (306)
T 2p4o_A 174 L--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV---------E--QTNIDDFAFDVEGN----------LYGATH 230 (306)
T ss_dssp E--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE---------E--SCCCSSEEEBTTCC----------EEEECB
T ss_pred c--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe---------c--cCCCCCeEECCCCC----------EEEEeC
Confidence 5 677778888888889999999864 111 011110 0 12345678888765 455556
Q ss_pred cCCeEEEEecCCCcccc--cccc-cccceeeecC--CCCCeeEEc
Q 019258 292 EDGILAVVEQGEEPFEL--LAEP-CAINSFDIDP--QNPSDVICS 331 (343)
Q Consensus 292 ~dg~i~~~~~~~~~~~~--~~~~-~~i~s~~~~~--~~~~~l~~~ 331 (343)
..+.|.+++...+...+ ...+ ....++++.+ .+++.|..+
T Consensus 231 ~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 231 IYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp TTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred CCCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEE
Confidence 67889999875433222 1222 3467888872 233444443
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.37 E-value=0.018 Score=55.32 Aligned_cols=160 Identities=13% Similarity=0.087 Sum_probs=90.9
Q ss_pred CCeEEEEcCCCcEEEEEccCceeeeeeccCCc-cccCeE-EEEecCCEEEEEeC------CCcEEEEECCCCceEEEEEc
Q 019258 82 QSLVAASTLSGSLHVLSSAMQVLLSVDENSGF-HVGPIS-GVDLTGSECVSVGE------DGRVNLVSVIGGGEFKRVYD 153 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~-h~~~v~-~~~~~~~~~~s~s~------dg~v~~wd~~~~~~~~~~~~ 153 (343)
++.+++++.|+.|..+|..+++.+-....... ....+. ...+.+..++.+.. +|.|..+|..+++..-+...
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 57888899999999999886655422221100 000111 11122445554432 68999999999865444432
Q ss_pred CCCc-----------------------------cceEEEEeCC-CCEEEEEeCCC-------------------cEEEEE
Q 019258 154 GNGL-----------------------------VGFNCVKWAS-PTEFVTGGFGY-------------------GLQWWD 184 (343)
Q Consensus 154 ~~~~-----------------------------~~v~~~~~~~-~~~l~t~~~d~-------------------~i~iwd 184 (343)
.... .....+++.+ .+.+..++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1100 0012356777 66777777665 389999
Q ss_pred ccccCCCCCeeEEecccCCC-CC-cccCeEEEEEcCCCC--eEEEEEecCCcEEEEEccCCcee
Q 019258 185 LRRAGSGGPVLQFKGNFGSQ-GK-ASGMIHSVDIHPSRK--HTCLAGGSSGTVFAWDLRWQQQS 244 (343)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~v~~~p~~~--~~~~sg~~dg~v~iwd~~~~~~~ 244 (343)
.++ ++...++....... .. ...+.....+..++. .+++.++.+|.++++|.++++..
T Consensus 277 ~~t---G~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 277 PDT---GKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp TTT---CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CCC---CceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 988 77777665321000 00 002222223222342 35778999999999999887654
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.37 E-value=0.054 Score=50.97 Aligned_cols=162 Identities=11% Similarity=0.038 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccc--cCeE-EEEecCCEEEEEeC------CCcEEEEECCCCceEEEE
Q 019258 81 HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHV--GPIS-GVDLTGSECVSVGE------DGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 81 ~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~--~~v~-~~~~~~~~~~s~s~------dg~v~~wd~~~~~~~~~~ 151 (343)
.+..+++++.|+.+..+|..+++.+-..... .+. ..+. ...+.+..++.++. ++.|..+|..+++..-+.
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVC-DPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCC-CCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 3678888999999999998766544222211 110 0111 11122455555554 799999999998654444
Q ss_pred EcCCCcc------------------------------------ceEEEEeCC-CCEEEEEeCC----------------C
Q 019258 152 YDGNGLV------------------------------------GFNCVKWAS-PTEFVTGGFG----------------Y 178 (343)
Q Consensus 152 ~~~~~~~------------------------------------~v~~~~~~~-~~~l~t~~~d----------------~ 178 (343)
....... ....+++.+ .+.+..+..+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 3221100 001244555 4555555432 3
Q ss_pred cEEEEEccccCCCCCeeEEecccCCC---CCcccCeEEEEEcCCCC--eEEEEEecCCcEEEEEccCCceeeee
Q 019258 179 GLQWWDLRRAGSGGPVLQFKGNFGSQ---GKASGMIHSVDIHPSRK--HTCLAGGSSGTVFAWDLRWQQQSIVL 247 (343)
Q Consensus 179 ~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~v~~~p~~~--~~~~sg~~dg~v~iwd~~~~~~~~~~ 247 (343)
.|..+|.++ ++.+.++....... .....++. +...+++. .+++.++.+|.++++|.++++.....
T Consensus 273 ~v~Ald~~t---G~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 273 TIWGRDLDT---GMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp EEEEEETTT---CCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEecCC---CcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 588999988 77776665321100 00012222 22223453 45677899999999999887655443
No 263
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.36 E-value=0.061 Score=46.50 Aligned_cols=216 Identities=6% Similarity=-0.087 Sum_probs=120.8
Q ss_pred CCcEEEEEccCce-eeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeC
Q 019258 91 SGSLHVLSSAMQV-LLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA 166 (343)
Q Consensus 91 dg~v~v~~~~~~~-~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~ 166 (343)
...|+..++.... ...... .......+++|. +..+.+-...+.|..++..............-. ....+++.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~---~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~-~p~glavd 87 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVV---GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL-SPDGLACD 87 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEE---EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS-CCCEEEEE
T ss_pred cCeEEEEECCCCceEEEEEe---cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC-CccEEEEE
Confidence 4578888887431 111110 112345678887 445556567788999988765211111111111 35567776
Q ss_pred C--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe-cCCcEEEEEccCCce
Q 019258 167 S--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG-SSGTVFAWDLRWQQQ 243 (343)
Q Consensus 167 ~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~-~dg~v~iwd~~~~~~ 243 (343)
+ +..+++-...+.|.++++.. .....+.... . .....++++|.+..++.+-. ..+.|...++.. ..
T Consensus 88 ~~~g~ly~~d~~~~~I~~~~~dG----~~~~~l~~~~--~----~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~ 156 (318)
T 3sov_A 88 WLGEKLYWTDSETNRIEVSNLDG----SLRKVLFWQE--L----DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SS 156 (318)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS----CSCEEEECSS--C----SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CS
T ss_pred cCCCeEEEEECCCCEEEEEECCC----CcEEEEEeCC--C----CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CC
Confidence 5 45556666688999999854 2223332111 1 45789999997767776653 367898888764 22
Q ss_pred eeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-cccccc-ccccceeeec
Q 019258 244 SIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLAE-PCAINSFDID 321 (343)
Q Consensus 244 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~~-~~~i~s~~~~ 321 (343)
...+. ...-..-+.|+++|++.. ..++=+..+.|+.++..... ..+... ......++++
T Consensus 157 ~~~~~----------~~~l~~Pnglavd~~~~~---------lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~ 217 (318)
T 3sov_A 157 RFIII----------NSEIYWPNGLTLDYEEQK---------LYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF 217 (318)
T ss_dssp CEEEE----------CSSCSCEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE
T ss_pred eEEEE----------ECCCCCccEEEEeccCCE---------EEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe
Confidence 22222 111234578999997764 44455667789988875332 222221 2234566666
Q ss_pred CCCCCeeEEccCCceEEEEeC
Q 019258 322 PQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 322 ~~~~~~l~~~~~~~~i~~~~~ 342 (343)
. + ...++-...+.|..+++
T Consensus 218 ~-~-~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 218 E-D-ILYWTDWSTHSILACNK 236 (318)
T ss_dssp T-T-EEEEEETTTTEEEEEET
T ss_pred C-C-EEEEEecCCCeEEEEEC
Confidence 4 1 33444444567776654
No 264
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.34 E-value=0.14 Score=50.13 Aligned_cols=216 Identities=7% Similarity=-0.063 Sum_probs=121.6
Q ss_pred CCCcEEEEEccCceeeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCc---eEEEEEcCCCccceEEE
Q 019258 90 LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGG---EFKRVYDGNGLVGFNCV 163 (343)
Q Consensus 90 ~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~---~~~~~~~~~~~~~v~~~ 163 (343)
....|+..++.......+.. ....+.++++. +..+++-...+.|+.+++.... ....++... ......|
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~----~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~-l~~P~GL 476 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQAPDGL 476 (791)
T ss_dssp CBSSEEEECTTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-CSCCCEE
T ss_pred cccceeEeeccCCcceeeec----CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC-CCCccee
Confidence 44567777776433222222 23456788886 4455566667888888886521 123333312 1146677
Q ss_pred EeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC-CcEEEEEccC
Q 019258 164 KWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS-GTVFAWDLRW 240 (343)
Q Consensus 164 ~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d-g~v~iwd~~~ 240 (343)
++.+ .+++++-...+.|.+.++.. .....+.... . .....|+++|....++.+-..+ +.|...++..
T Consensus 477 AvD~~~~~LY~tD~~~~~I~v~~ldG----~~~~~l~~~~----l--~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 477 AVDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFREN----G--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTS----SSEEEEEECT----T--CCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eeeecCCcEEEEecCCCeEEEEeCCC----CeEEEEEeCC----C--CCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 7776 45666666789999999855 3333333211 1 4488999999877787775444 7899998864
Q ss_pred CceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-ccccccc---cccc
Q 019258 241 QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLAEP---CAIN 316 (343)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~~~---~~i~ 316 (343)
.....+. ...-..-..|++++.... ..++=...+.|+..+..... ..+.... ....
T Consensus 547 -~~~~~lv----------~~~l~~P~GLavD~~~~~---------LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~ 606 (791)
T 3m0c_C 547 -VDIYSLV----------TENIQWPNGITLDLLSGR---------LYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF 606 (791)
T ss_dssp -CCEEEEE----------CSSCSCEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEE
T ss_pred -CceEEEE----------eCCCCCceEEEEecCCCe---------EEEEeCCCCcEEEEecCCCceEEEecCCCccCCCC
Confidence 3333333 122346788999987763 33444556678888775433 2332221 1234
Q ss_pred eeeecCCCCCeeEEccCCceEEEEeC
Q 019258 317 SFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 317 s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
+|++.. +...++-...+.|..+++
T Consensus 607 glav~~--~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 607 SLAVFE--DKVFWTDIINEAIFSANR 630 (791)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEET
T ss_pred EEEEeC--CEEEEEECCCCEEEEEeC
Confidence 666654 133333334466666553
No 265
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.28 E-value=0.0066 Score=53.80 Aligned_cols=197 Identities=9% Similarity=0.017 Sum_probs=112.4
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceee--eeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEEE
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLET--HSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHV 96 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~--w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~v 96 (343)
.....+.++| +++++..+.+... + .+.+ +|... +..++.++.+ .+.......+++.+.||.+.+
T Consensus 124 ~~P~~ia~Sp----DGk~lyVan~~~~-~--~v~V~~iD~~t------v~~i~v~~~~-~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 124 PRVHIIGNCA----SSACLLFFLFGSS-A--AAGLSVPGASD------DQLTKSASCF-HIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp CCTTSEEECT----TSSCEEEEECSSS-C--EEEEEETTTEE------EEEEECSSCC-CCEEEETTEEECCCCTTSCEE
T ss_pred CCcceEEEcC----CCCEEEEEccCCC-C--eEEEEEEchhh------ceEEECCCce-EEccCCCeEEEEEcCCCCEEE
Confidence 3466778888 8888887765321 1 2445 77733 1222222221 111124456667778888888
Q ss_pred EEccC----ceeeeee--ccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCc-eEEEEEcCC-------Cc--cc
Q 019258 97 LSSAM----QVLLSVD--ENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGG-EFKRVYDGN-------GL--VG 159 (343)
Q Consensus 97 ~~~~~----~~~~~~~--~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~-~~~~~~~~~-------~~--~~ 159 (343)
.++.. ...+... ........+. . .. +..++..+. +.|.+.|+.... .+...+... .. ..
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~--~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q--ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCE-E--ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred EECccccccCCeEEEEeeeeeeCCCCcc-c--cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 88864 1212110 0111123344 2 33 666666666 899999986532 122211110 00 01
Q ss_pred eEEEEeCC-CCEEEEEeC---------CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe-
Q 019258 160 FNCVKWAS-PTEFVTGGF---------GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG- 228 (343)
Q Consensus 160 v~~~~~~~-~~~l~t~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~- 228 (343)
...+.+++ ++++..+.. ++.+.++|+.+ .+.+..+... .....++++|++..++++..
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t---~~vv~~i~vg--------~~p~gi~~s~Dg~~l~va~~~ 334 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV---GQTSGPISNG--------HDSDAIIAAQDGASDNYANSA 334 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS---CCEEECCEEE--------EEECEEEECCSSSCEEEEEET
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC---CeEEEEEECC--------CCcceEEECCCCCEEEEEccC
Confidence 22256787 555554432 24566999988 6666666532 34789999999987888877
Q ss_pred cCCcEEEEEccCCcee
Q 019258 229 SSGTVFAWDLRWQQQS 244 (343)
Q Consensus 229 ~dg~v~iwd~~~~~~~ 244 (343)
.++.|.++|+.+.+..
T Consensus 335 ~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 335 GTEVLDIYDAASDQDQ 350 (368)
T ss_dssp TTTEEEEEESSSCEEE
T ss_pred CCCeEEEEECCCCcEE
Confidence 6999999999985443
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.28 E-value=0.061 Score=44.84 Aligned_cols=207 Identities=9% Similarity=0.090 Sum_probs=115.1
Q ss_pred cCeEEEEec--CC-EEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEE-eCCCcEEEEEccccCCC
Q 019258 116 GPISGVDLT--GS-ECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTG-GFGYGLQWWDLRRAGSG 191 (343)
Q Consensus 116 ~~v~~~~~~--~~-~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~-~~d~~i~iwd~~~~~~~ 191 (343)
..+..++++ ++ .++....++.|...|.. ++ +.+.+........-.+++.+.+.++.+ -.++.+.++++.. .+
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~-v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~--~~ 102 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD-LIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP--NS 102 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC-EEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT--TC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC-EEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC--CC
Confidence 468999998 44 44557778889999988 54 444432222124788888885555444 4578899998866 22
Q ss_pred C--CeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccC--CceeeeeecCCCCcccccCCccccEEE
Q 019258 192 G--PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW--QQQSIVLSGVGTGEAVTHSLSESEVWE 267 (343)
Q Consensus 192 ~--~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~ 267 (343)
. .+.......... ........++++|.+..++++ .+.....+|.+.. ........... ......+...+.+
T Consensus 103 ~i~~~~~~~~~~~~~-~~N~g~EGLA~d~~~~~L~va-~E~~p~~i~~~~g~~~~~~l~i~~~~---~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 103 EVKILKKIKIPLQES-PTNCGFEGLAYSRQDHTFWFF-KEKNPIEVYKVNGLLSSNELHISKDK---ALQRQFTLDDVSG 177 (255)
T ss_dssp CEEEEEEEECCCSSC-CCSSCCEEEEEETTTTEEEEE-EESSSEEEEEEESTTCSSCCEEEECH---HHHHTCCSSCCCE
T ss_pred eeeeeeeeccccccc-cccCCcceEEEeCCCCEEEEE-ECcCCceEEEEcccccCCceeeecch---hhccccccCCcee
Confidence 2 112222110000 111447899999998766654 4443444444431 11111111000 0000123345789
Q ss_pred EEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcccccccc----------cccceeeecCCCCCeeEEccCCceE
Q 019258 268 VQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAEP----------CAINSFDIDPQNPSDVICSLEWESI 337 (343)
Q Consensus 268 v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~----------~~i~s~~~~~~~~~~l~~~~~~~~i 337 (343)
++++|.... .++...+...|..++...+....+.-. ..--.+++++ +|..-|+ ++...+
T Consensus 178 l~~dp~tg~---------lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIv-sE~n~~ 246 (255)
T 3qqz_A 178 AEFNQQKNT---------LLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIV-SEPNRF 246 (255)
T ss_dssp EEEETTTTE---------EEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEE-ETTTEE
T ss_pred EEEcCCCCe---------EEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEE-cCCceE
Confidence 999998774 344444445677788765543333221 2347788888 4554444 677899
Q ss_pred EEEeC
Q 019258 338 AIVSR 342 (343)
Q Consensus 338 ~~~~~ 342 (343)
|.|++
T Consensus 247 y~f~~ 251 (255)
T 3qqz_A 247 YRFTP 251 (255)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98875
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.27 E-value=0.072 Score=45.55 Aligned_cols=201 Identities=11% Similarity=0.044 Sum_probs=108.7
Q ss_pred ccccCCcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc-CCCeEEEEc
Q 019258 11 QVHRFPQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS-HQSLVAAST 89 (343)
Q Consensus 11 ~~~~~~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~-~~~~l~~~s 89 (343)
.+..+|.......++|.| +++++++-..++ +|..++.... ....+...+.+..+++. +++++++..
T Consensus 24 ~~~~~p~~~~pegia~~~----~g~lyv~d~~~~-----~I~~~d~~g~----~~~~~~~~~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 24 IITSFPVNTFLENLASAP----DGTIFVTNHEVG-----EIVSITPDGN----QQIHATVEGKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp EEEEECTTCCEEEEEECT----TSCEEEEETTTT-----EEEEECTTCC----EEEEEECSSEEEEEEECTTSCEEEEEE
T ss_pred EeEeCCCCCCcceEEECC----CCCEEEEeCCCC-----eEEEECCCCc----eEEEEeCCCCceeEEEcCCCcEEEEec
Confidence 556666667888999999 677777654332 3555555331 12223344578899998 666555544
Q ss_pred CCC--cEEEEEccCceeeeeeccCCccccCeEEEE-ecCCE-EEEEeCCCcEEEEECCCCc-eEEEEE------cC-CCc
Q 019258 90 LSG--SLHVLSSAMQVLLSVDENSGFHVGPISGVD-LTGSE-CVSVGEDGRVNLVSVIGGG-EFKRVY------DG-NGL 157 (343)
Q Consensus 90 ~dg--~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~-~~s~s~dg~v~~wd~~~~~-~~~~~~------~~-~~~ 157 (343)
... .|..++..+.+...+.... ....-..+. +.+.. +++-..++.|..+|..++. .+.... .. ...
T Consensus 91 ~~~~~~v~~~d~~~g~~~~~~~~~--~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 91 NADSIPVVSLVKSDGTVETLLTLP--DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEECT--TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred cCCcceEEEEcCCCCeEEEEEeCC--CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence 333 3555554443322222111 111223333 33444 4444468888888876542 111110 00 111
Q ss_pred cceEEEEeCC-C-CEEEEEeCCCcEEEEEccccCCCC--CeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcE
Q 019258 158 VGFNCVKWAS-P-TEFVTGGFGYGLQWWDLRRAGSGG--PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTV 233 (343)
Q Consensus 158 ~~v~~~~~~~-~-~~l~t~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v 233 (343)
.....+ ++ + ..+++-...+.|..+|+.. .+. ....+... .....++++++|. ++++....+.|
T Consensus 169 ~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~--~g~~~~~~~~~~~--------~~P~gi~vd~dG~-l~va~~~~~~V 235 (306)
T 2p4o_A 169 PAANGL--KRFGNFLYVSNTEKMLLLRIPVDS--TDKPGEPEIFVEQ--------TNIDDFAFDVEGN-LYGATHIYNSV 235 (306)
T ss_dssp CSEEEE--EEETTEEEEEETTTTEEEEEEBCT--TSCBCCCEEEEES--------CCCSSEEEBTTCC-EEEECBTTCCE
T ss_pred CcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC--CCCCCccEEEecc--------CCCCCeEECCCCC-EEEEeCCCCeE
Confidence 124455 44 3 4556666688999999864 111 11112111 2355788899884 66676678899
Q ss_pred EEEEcc
Q 019258 234 FAWDLR 239 (343)
Q Consensus 234 ~iwd~~ 239 (343)
.++|..
T Consensus 236 ~~~~~~ 241 (306)
T 2p4o_A 236 VRIAPD 241 (306)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 999864
No 268
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.27 E-value=0.038 Score=47.64 Aligned_cols=183 Identities=10% Similarity=0.037 Sum_probs=103.8
Q ss_pred EEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCC------------------ccceEEEEeCC-CCEEEEEeCC
Q 019258 119 SGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNG------------------LVGFNCVKWAS-PTEFVTGGFG 177 (343)
Q Consensus 119 ~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~------------------~~~v~~~~~~~-~~~l~t~~~d 177 (343)
.++.+. +..+.++..++.|..||..++. ......... ......+++.+ ...|..+...
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 456665 5557778888999999987653 332221100 01478889887 6777777666
Q ss_pred CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcC-CCCeEEEEEec-----------------CCcEEEEEcc
Q 019258 178 YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP-SRKHTCLAGGS-----------------SGTVFAWDLR 239 (343)
Q Consensus 178 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p-~~~~~~~sg~~-----------------dg~v~iwd~~ 239 (343)
+.|..+|... + .+..+....... .....+.+++.| ++. ++++-.. +|.|..||..
T Consensus 101 ~~i~~~d~~~---g-~~~~~~~~~~~~--~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 101 YHLSVVGSEG---G-HATQLATSVDGV--PFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp TEEEEECTTC---E-ECEEEESEETTE--ECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred CCEEEEeCCC---C-EEEEecccCCCC--cccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 6688888654 2 222222111000 003478899999 875 4444322 3678888876
Q ss_pred CCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC---ccccccc-cccc
Q 019258 240 WQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE---PFELLAE-PCAI 315 (343)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~---~~~~~~~-~~~i 315 (343)
......... .......|+++|++.. ..++-+..+.|+.++.... ..+.... +. .
T Consensus 174 ~~~~~~~~~------------~~~~p~gia~~~dg~~---------lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P 231 (322)
T 2fp8_A 174 TKETTLLLK------------ELHVPGGAEVSADSSF---------VLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-P 231 (322)
T ss_dssp TTEEEEEEE------------EESCCCEEEECTTSSE---------EEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-E
T ss_pred CCEEEEecc------------CCccCcceEECCCCCE---------EEEEeCCCCeEEEEECCCCcCCccceEEeCCC-C
Confidence 543221111 1123457899998763 3344466788988876531 1122111 22 5
Q ss_pred ceeeecCCCCCeeEEcc
Q 019258 316 NSFDIDPQNPSDVICSL 332 (343)
Q Consensus 316 ~s~~~~~~~~~~l~~~~ 332 (343)
..+.+++ +|...++..
T Consensus 232 ~gi~~d~-~G~l~va~~ 247 (322)
T 2fp8_A 232 GNIKRNA-DGHFWVSSS 247 (322)
T ss_dssp EEEEECT-TSCEEEEEE
T ss_pred CCeEECC-CCCEEEEec
Confidence 6678887 455555543
No 269
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.17 E-value=0.079 Score=44.14 Aligned_cols=212 Identities=12% Similarity=0.070 Sum_probs=121.7
Q ss_pred CCCeeEEEcc-CCCeE-EEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEE-EEEeCCCcEEEEECCCCc
Q 019258 71 PTRISSLSTS-HQSLV-AASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSEC-VSVGEDGRVNLVSVIGGG 146 (343)
Q Consensus 71 ~~~v~~v~~~-~~~~l-~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-~s~s~dg~v~~wd~~~~~ 146 (343)
...+..++|. +++.| ++...++.|...|.. ...+...... -....-.+++. +..+ ++.-.++.+.++++....
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~--g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLD--FVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECS--SCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecC--CCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 3579999998 55544 456677888877776 3333222221 12456777776 4444 554467788888876543
Q ss_pred e--EEEEEc-----CCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEEecc--cCCCCCcccCeEEEEE
Q 019258 147 E--FKRVYD-----GNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGN--FGSQGKASGMIHSVDI 216 (343)
Q Consensus 147 ~--~~~~~~-----~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~v~~ 216 (343)
. ...... .......-.++|.+ .+.|.++.......+|.+..-.....+..+... ...... ....++++
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~--~d~S~l~~ 180 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTL--DDVSGAEF 180 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCS--SCCCEEEE
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhcccccc--CCceeEEE
Confidence 2 112221 12223578999999 667777777655566655410011122222110 000011 34789999
Q ss_pred cCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeE
Q 019258 217 HPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296 (343)
Q Consensus 217 ~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i 296 (343)
+|...++++...++..+..+|... + +...+.+..+... ...--..--.|+|.+++. |+..|+-+.+
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~g-~-~~~~~~L~~g~~~-l~~~~~qpEGia~d~~G~-----------lyIvsE~n~~ 246 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLVG-E-VIGEMSLTKGSRG-LSHNIKQAEGVAMDASGN-----------IYIVSEPNRF 246 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTC-C-EEEEEECSTTGGG-CSSCCCSEEEEEECTTCC-----------EEEEETTTEE
T ss_pred cCCCCeEEEEECCCCeEEEEcCCC-C-EEEEEEcCCccCC-cccccCCCCeeEECCCCC-----------EEEEcCCceE
Confidence 998888888888899999999764 3 4444322210000 000012456899999875 5555888888
Q ss_pred EEEec
Q 019258 297 AVVEQ 301 (343)
Q Consensus 297 ~~~~~ 301 (343)
+.++.
T Consensus 247 y~f~~ 251 (255)
T 3qqz_A 247 YRFTP 251 (255)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 87765
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.05 E-value=0.15 Score=45.23 Aligned_cols=196 Identities=6% Similarity=-0.091 Sum_probs=113.3
Q ss_pred CCCeeEEEcc-CCC-eEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCce
Q 019258 71 PTRISSLSTS-HQS-LVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGE 147 (343)
Q Consensus 71 ~~~v~~v~~~-~~~-~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~ 147 (343)
...+.+++|. .++ ++++-...+.|..++........+.... .....-.++++. +..+++-...+.|.+.+++...
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~-~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~- 192 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH- 192 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS-CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC-CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-
Confidence 3457889988 444 4555556788888887743322222110 111112344444 5555666677888888887642
Q ss_pred EEEEEcCCCccceEEEEeCC-CCEEEEEe-CC-CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEE
Q 019258 148 FKRVYDGNGLVGFNCVKWAS-PTEFVTGG-FG-YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTC 224 (343)
Q Consensus 148 ~~~~~~~~~~~~v~~~~~~~-~~~l~t~~-~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~ 224 (343)
...+... .......+++.| ...+..+. .. +.|...++.. .....+.... . ...+.|+++|.+..++
T Consensus 193 ~~~l~~~-~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG----~~~~~~~~~~----~--~~PnGlavd~~~~~lY 261 (386)
T 3v65_B 193 RKVLLWQ-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG----SGRRIIADTH----L--FWPNGLTIDYAGRRMY 261 (386)
T ss_dssp CEEEECS-SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS----CSCEEEECSS----C--SCEEEEEEEGGGTEEE
T ss_pred eEEeecC-CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC----CCcEEEEECC----C--CCeeeEEEeCCCCEEE
Confidence 2333322 222578899988 55444443 34 6777777644 3333332111 1 4578999998888888
Q ss_pred EEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEec
Q 019258 225 LAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 225 ~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~ 301 (343)
++-+..+.|..+|+.. .....+. ......-..|++. .+. .+++-...+.|..++.
T Consensus 262 ~aD~~~~~I~~~d~dG-~~~~~~~----------~~~~~~P~giav~-~~~----------ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 262 WVDAKHHVIERANLDG-SHRKAVI----------SQGLPHPFAITVF-EDS----------LYWTDWHTKSINSANK 316 (386)
T ss_dssp EEETTTTEEEEECTTS-CSCEEEE----------CSSCSSEEEEEEE-TTE----------EEEEETTTTEEEEEET
T ss_pred EEECCCCEEEEEeCCC-CeeEEEE----------ECCCCCceEEEEE-CCE----------EEEeeCCCCeEEEEEC
Confidence 8888888999999864 3323333 1112334566663 222 4556666777877763
No 271
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.03 E-value=0.031 Score=53.72 Aligned_cols=200 Identities=13% Similarity=0.087 Sum_probs=112.7
Q ss_pred CCeEEEEcCCCcEEEEEccCceeeeeeccCCc-----c-c-cCe-EEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEc
Q 019258 82 QSLVAASTLSGSLHVLSSAMQVLLSVDENSGF-----H-V-GPI-SGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYD 153 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~-----h-~-~~v-~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~ 153 (343)
++.+++++.++.|..+|..+++.+=....... + . ..+ ..+.+.+..++.++.|+.|..+|..+++..-+...
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 56777788888888888876554422211000 0 0 001 12333477888889999999999999865544432
Q ss_pred CCCccceEEEEeCC---CCEEEEEeC------CCcEEEEEccccCCCCCeeEEecccCCCCC------------------
Q 019258 154 GNGLVGFNCVKWAS---PTEFVTGGF------GYGLQWWDLRRAGSGGPVLQFKGNFGSQGK------------------ 206 (343)
Q Consensus 154 ~~~~~~v~~~~~~~---~~~l~t~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------------------ 206 (343)
.... ....+...| .+.++.+.. ++.|..+|.++ ++.+.++.........
T Consensus 146 ~~~~-~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~t---G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 146 TDPA-KPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADT---GKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp SCTT-SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT---CCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred CCCC-CcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCC---CcEEEEecccCCCCCccccccccccccccCCccc
Confidence 2110 011111122 455665543 58999999998 7877776532100000
Q ss_pred ------cccCeEEEEEcCCCCeEEEEEecCC-------------------cEEEEEccCCceeeeeecCCCCcccccCCc
Q 019258 207 ------ASGMIHSVDIHPSRKHTCLAGGSSG-------------------TVFAWDLRWQQQSIVLSGVGTGEAVTHSLS 261 (343)
Q Consensus 207 ------~~~~i~~v~~~p~~~~~~~sg~~dg-------------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h 261 (343)
.......++++|... ++..++.++ .|..+|.++++....+... .|
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~---------~~ 291 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVT---------PG 291 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESS---------TT
T ss_pred eeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecC---------CC
Confidence 001123467888755 455666665 3999999998877776521 12
Q ss_pred c-------ccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 262 E-------SEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 262 ~-------~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
. .+..-..+..++.. ...++.++.+|.++++|..
T Consensus 292 ~~wd~~~~~~~~~~d~~~~G~~-------~~~v~~~~~~G~l~~lD~~ 332 (668)
T 1kv9_A 292 DSWDFTATQQITLAELNIDGKP-------RKVLMQAPKNGFFYVLDRT 332 (668)
T ss_dssp CCSCCCCCSCEEEEEEEETTEE-------EEEEEECCTTSEEEEEETT
T ss_pred ccccccCCCCcEEEEeccCCcE-------EEEEEEECCCCEEEEEECC
Confidence 1 12211122223220 0147888999999998864
No 272
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.91 E-value=0.23 Score=46.38 Aligned_cols=184 Identities=11% Similarity=-0.040 Sum_probs=105.8
Q ss_pred CCEE-EEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEe-C-C-CCEEEEEe------------------CCCcEEE
Q 019258 125 GSEC-VSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKW-A-S-PTEFVTGG------------------FGYGLQW 182 (343)
Q Consensus 125 ~~~~-~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~-~-~-~~~l~t~~------------------~d~~i~i 182 (343)
|+++ ++...+.+|.+.|+.+.+ +..++.-........+.+ . | ..++++++ .++.+.+
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~-~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMK-CDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTE-EEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCce-EeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 4444 455567789999999984 555333222225888887 3 6 66777664 3568999
Q ss_pred EEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC--------------C-----------------
Q 019258 183 WDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS--------------G----------------- 231 (343)
Q Consensus 183 wd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d--------------g----------------- 231 (343)
.|..+ .+...++..- +.-..++++|++.+.+++...+ .
T Consensus 180 ID~~t---~~v~~qI~Vg--------g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 180 VDADK---WEVAWQVLVS--------GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp EETTT---TEEEEEEEES--------SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred EECCC---CeEEEEEEeC--------CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 99987 5666665532 1234577889988777665333 1
Q ss_pred ------cEEEEEccC--CceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCC
Q 019258 232 ------TVFAWDLRW--QQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGE 303 (343)
Q Consensus 232 ------~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 303 (343)
.|.+.|.++ ........ . -....-++.++|++.. .+++.-.+.+|.+++...
T Consensus 249 k~~~i~~V~VID~~~~~~~~~~~~I----------p-vg~~PhGv~~sPDGk~---------v~V~~~~s~~VsVid~~~ 308 (595)
T 1fwx_A 249 DYQELNGVKVVDGRKEASSLFTRYI----------P-IANNPHGCNMAPDKKH---------LCVAGKLSPTVTVLDVTR 308 (595)
T ss_dssp CSEEETTEEEEECSGGGCCSSEEEE----------E-EESSCCCEEECTTSSE---------EEEECTTSSBEEEEEGGG
T ss_pred CeeEECcEEEEeCcccCCceeEEEE----------e-cCCCceEEEEcCCCCE---------EEEeCCCCCeEEEEECcc
Confidence 355555554 11101111 0 1123357899999985 566667888999998763
Q ss_pred Cc----------cccccc---ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 304 EP----------FELLAE---PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 304 ~~----------~~~~~~---~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
.. ..+..+ ..--.-++++| +|..-++-.-+..|.+|+
T Consensus 309 ~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 309 FDAVFYENADPRSAVVAEPELGLGPLHTAFDG-RGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp HHHHHHSCCCGGGGEEECCBCCSCEEEEEECT-TSEEEEEETTTTEEEEEE
T ss_pred cccccccccCcccceEEEcCCCCCcceEEECC-CCeEEEEEecCCcEEEEE
Confidence 21 011111 23456677887 442222222344666665
No 273
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.90 E-value=0.18 Score=43.60 Aligned_cols=277 Identities=8% Similarity=-0.003 Sum_probs=138.6
Q ss_pred CcccceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCC-CCCCCCCcc-C-CCCCCeeEEEccCCCeEEEEcCCC
Q 019258 16 PQSKYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISL-PASLTPHSQ-W-TPPTRISSLSTSHQSLVAASTLSG 92 (343)
Q Consensus 16 ~~~~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~-~~~~~~~~~-~-~~~~~v~~v~~~~~~~l~~~s~dg 92 (343)
+....+.+|.+.+ .+..++.|. ++. ++...+ ...++.... . .....+.+|.|.+ +.+++++..|
T Consensus 33 ~~~~~~~~v~~~~----~~~~~~~G~-~g~-------i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g 99 (327)
T 2xbg_A 33 PTTATILDMSFID----RHHGWLVGV-NAT-------LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPP 99 (327)
T ss_dssp SCSSCEEEEEESS----SSCEEEEET-TTE-------EEEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETT
T ss_pred CCCCcEEEEEECC----CCcEEEEcC-CCe-------EEEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCC
Confidence 4456788888876 456666543 321 333322 122222211 1 1234688888874 4444455566
Q ss_pred cEEEEEccC-ceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCE
Q 019258 93 SLHVLSSAM-QVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTE 170 (343)
Q Consensus 93 ~v~v~~~~~-~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 170 (343)
.| |...+ ++.-........+.+.+..+.+. ...++.++.+|.|.. ..+.++.-......... .+..+.+.+...
T Consensus 100 ~i--~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~-~~~~~~~~~~~~ 175 (327)
T 2xbg_A 100 IM--LHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIG-VMRNLNRSPSGE 175 (327)
T ss_dssp EE--EEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCC-CEEEEEECTTSC
T ss_pred eE--EEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCc-ceEEEEEcCCCc
Confidence 43 44332 22222221111123456677765 555555666665432 22233323333333333 688899988555
Q ss_pred EEEEeCCCcEEE-EEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeec
Q 019258 171 FVTGGFGYGLQW-WDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSG 249 (343)
Q Consensus 171 l~t~~~d~~i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~ 249 (343)
++..+.++.+.. +|- . +.....+.... . ..+..+.+.|++. ++ .++.+|.+++.+...+ .......
T Consensus 176 ~~~~g~~G~~~~S~d~-g---G~tW~~~~~~~--~----~~~~~~~~~~~g~-~~-~~~~~G~~~~s~~D~G-~tW~~~~ 242 (327)
T 2xbg_A 176 YVAVSSRGSFYSTWEP-G---QTAWEPHNRTT--S----RRLHNMGFTPDGR-LW-MIVNGGKIAFSDPDNS-ENWGELL 242 (327)
T ss_dssp EEEEETTSSEEEEECT-T---CSSCEEEECCS--S----SCEEEEEECTTSC-EE-EEETTTEEEEEETTEE-EEECCCB
T ss_pred EEEEECCCcEEEEeCC-C---CCceeECCCCC--C----CccceeEECCCCC-EE-EEeCCceEEEecCCCC-CeeEecc
Confidence 555666665544 332 0 23333332111 1 4588899988775 43 4567788877642111 1111110
Q ss_pred CCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcccccc----cccccceeeecCCCC
Q 019258 250 VGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLA----EPCAINSFDIDPQNP 325 (343)
Q Consensus 250 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~----~~~~i~s~~~~~~~~ 325 (343)
.. ...+...+..+.+.+++ .++.++.+|.|+.-......-+... .+..++++.+.+ +
T Consensus 243 ~~------~~~~~~~~~~v~~~~~~-----------~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~-~- 303 (327)
T 2xbg_A 243 SP------LRRNSVGFLDLAYRTPN-----------EVWLAGGAGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFS-P- 303 (327)
T ss_dssp CT------TSSCCSCEEEEEESSSS-----------CEEEEESTTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEE-T-
T ss_pred CC------cccCCcceEEEEecCCC-----------EEEEEeCCCeEEEeCCCCcccEEcCccCCCCCCeEEEEEEC-C-
Confidence 00 00122458889888753 4666677888754322222222122 135678888864 2
Q ss_pred CeeEEccCCceEEEEe
Q 019258 326 SDVICSLEWESIAIVS 341 (343)
Q Consensus 326 ~~l~~~~~~~~i~~~~ 341 (343)
..+++++.++.|+-++
T Consensus 304 ~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 304 DQGFILGQKGILLRYV 319 (327)
T ss_dssp TEEEEECSTTEEEEEC
T ss_pred CceEEEcCCceEEEEc
Confidence 4566666788887665
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.83 E-value=0.048 Score=52.24 Aligned_cols=106 Identities=12% Similarity=0.102 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCC-----------cEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEe-CCCcEEEEECCCCc
Q 019258 81 HQSLVAASTLSG-----------SLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVG-EDGRVNLVSVIGGG 146 (343)
Q Consensus 81 ~~~~l~~~s~dg-----------~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s-~dg~v~~wd~~~~~ 146 (343)
++.+++.|+.+. .+.+||....+-..+......+...+.++.+. +..++.|+ .+..+.+||..+.+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 566777776432 57788876443221111111122333344433 77888887 45689999998763
Q ss_pred eEEEEEcCCCccceEEEEeCC-CCEEEEEe-CC-----CcEEEEEccc
Q 019258 147 EFKRVYDGNGLVGFNCVKWAS-PTEFVTGG-FG-----YGLQWWDLRR 187 (343)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~-~d-----~~i~iwd~~~ 187 (343)
-...-..+..-.-.++...+ +..++.|+ .+ ..+.+||..+
T Consensus 277 -W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 277 -WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp -EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred -eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 33222211111223444454 77788888 34 5789999866
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.82 E-value=0.21 Score=43.10 Aligned_cols=194 Identities=6% Similarity=-0.092 Sum_probs=111.2
Q ss_pred CCeeEEEcc--CCCeEEEEcCCCcEEEEEccCcee--eeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCc
Q 019258 72 TRISSLSTS--HQSLVAASTLSGSLHVLSSAMQVL--LSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGG 146 (343)
Q Consensus 72 ~~v~~v~~~--~~~~l~~~s~dg~v~v~~~~~~~~--~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~ 146 (343)
..+.++.|. ++.++.+-...+.|..++...... ...... .....-.+++|. +..+++-...+.|.+.+++...
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~--l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG--LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC--CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC--CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 346688887 445556666778888888764321 111111 111112344444 5555666677889999987642
Q ss_pred eEEEEEcCCCccceEEEEeCC-CCEEEEEeC--CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeE
Q 019258 147 EFKRVYDGNGLVGFNCVKWAS-PTEFVTGGF--GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~ 223 (343)
...+.... ......+++.| ...+..+.. .+.|...++.. .....+.... . ..-+.++++|++..+
T Consensus 113 -~~~l~~~~-~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG----~~~~~~~~~~----l--~~Pnglavd~~~~~l 180 (318)
T 3sov_A 113 -RKVLFWQE-LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG----SSRFIIINSE----I--YWPNGLTLDYEEQKL 180 (318)
T ss_dssp -CEEEECSS-CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS----CSCEEEECSS----C--SCEEEEEEETTTTEE
T ss_pred -EEEEEeCC-CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC----CCeEEEEECC----C--CCccEEEEeccCCEE
Confidence 33333222 22578899988 555554442 57777777643 3223332111 1 457899999988888
Q ss_pred EEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEec
Q 019258 224 CLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 224 ~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~ 301 (343)
+.+-+..+.|..+|+.. .....+. ......-..|++.. .. .+++-...+.|..++.
T Consensus 181 Y~aD~~~~~I~~~d~dG-~~~~~~~----------~~~~~~P~glav~~--~~---------lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 181 YWADAKLNFIHKSNLDG-TNRQAVV----------KGSLPHPFALTLFE--DI---------LYWTDWSTHSILACNK 236 (318)
T ss_dssp EEEETTTTEEEEEETTS-CSCEEEE----------CSCCSCEEEEEEET--TE---------EEEEETTTTEEEEEET
T ss_pred EEEECCCCEEEEEcCCC-CceEEEe----------cCCCCCceEEEEeC--CE---------EEEEecCCCeEEEEEC
Confidence 88888889999999864 2222332 11122334566642 22 4555556667777665
No 276
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.78 E-value=0.2 Score=42.46 Aligned_cols=195 Identities=10% Similarity=0.035 Sum_probs=94.0
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCC-----cEEEEEccCceeeee
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSG-----SLHVLSSAMQVLLSV 107 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg-----~v~v~~~~~~~~~~~ 107 (343)
++.+++.|+.++....-.++.+|..... +..+..++.+-.-.++...++.+++.|+.++ .+.+||....+-..+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQ-WTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCc-eeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 4567777876654332346677775432 2222223322222223333567777776543 466777764432222
Q ss_pred eccCCccccCeEEEEecCCEEEEEeCC-------CcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCC---
Q 019258 108 DENSGFHVGPISGVDLTGSECVSVGED-------GRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG--- 177 (343)
Q Consensus 108 ~~~~~~h~~~v~~~~~~~~~~~s~s~d-------g~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d--- 177 (343)
.... ........+.+.+..++.|+.+ ..+..||+.+.+ -...-.......-.++....+..++.|+.+
T Consensus 140 ~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 140 APMN-TRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNE-WTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPL 217 (302)
T ss_dssp CCCS-SCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEECCBSSSS
T ss_pred CCCC-CcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCc-EEECCCCccccccccEEEECCEEEEECCCCCCc
Confidence 2111 1111122333346666666542 357889988763 333211111101122222345667777664
Q ss_pred --CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC-----cEEEEEccCC
Q 019258 178 --YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG-----TVFAWDLRWQ 241 (343)
Q Consensus 178 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg-----~v~iwd~~~~ 241 (343)
..+.+||+.+ .....+......+ .....+.+ +..+++.|+.++ .+.+||+.+.
T Consensus 218 ~~~~~~~yd~~~----~~W~~~~~~~~~r----~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 218 VRKSVEVYDPTT----NAWRQVADMNMCR----RNAGVCAV---NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp BCCCEEEEETTT----TEEEEECCCSSCC----BSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred ccceEEEEeCCC----CCEeeCCCCCCcc----ccCeEEEE---CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 4688899866 3333333221111 11222222 235777787654 4888888763
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.70 E-value=0.27 Score=47.88 Aligned_cols=157 Identities=11% Similarity=0.052 Sum_probs=85.6
Q ss_pred eeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCC-CCCccCCCCCCeeEEEcc-CCCeEEEEcC---CCcEE
Q 019258 21 IDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASL-TPHSQWTPPTRISSLSTS-HQSLVAASTL---SGSLH 95 (343)
Q Consensus 21 i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~-~~~~~~~~~~~v~~v~~~-~~~~l~~~s~---dg~v~ 95 (343)
...++|+| +++.|+-.+.|.......|+.+++.+.... .++...........+.|+ +++.|+..+. ...|.
T Consensus 223 ~~~~~Wsp----Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~ 298 (751)
T 2xe4_A 223 NGEIVWGP----DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVH 298 (751)
T ss_dssp CSCCEECS----STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred eeeEEEec----CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEE
Confidence 45789999 787777777764322125778888543211 122222333445678888 7777665553 34567
Q ss_pred EEEccCce-ee--eeeccCCccccCeEEEEec-CCEEEEEeCC-----CcEEEEECCCCceEEE-EEcCCCccceEEEEe
Q 019258 96 VLSSAMQV-LL--SVDENSGFHVGPISGVDLT-GSECVSVGED-----GRVNLVSVIGGGEFKR-VYDGNGLVGFNCVKW 165 (343)
Q Consensus 96 v~~~~~~~-~~--~~~~~~~~h~~~v~~~~~~-~~~~~s~s~d-----g~v~~wd~~~~~~~~~-~~~~~~~~~v~~~~~ 165 (343)
++++.... .. .... ....+...++.|. ++.|+..+.. ..|..+|+.++..... ++.......+..+.+
T Consensus 299 ~~d~~~~~~~~~~~~l~--~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~ 376 (751)
T 2xe4_A 299 LLDLRKGNAHNTLEIVR--PREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV 376 (751)
T ss_dssp EEESSSCTTCCCEEESS--CCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE
T ss_pred EEECCCCCCCceeEEee--cCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE
Confidence 77776431 11 1111 1234566777765 7766555433 2566667664212233 333332224566666
Q ss_pred CCCCEEEEEeCCCcEEEE
Q 019258 166 ASPTEFVTGGFGYGLQWW 183 (343)
Q Consensus 166 ~~~~~l~t~~~d~~i~iw 183 (343)
.....+++...++..++|
T Consensus 377 ~~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 377 RSNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp CSSEEEEEEEETTEEEEE
T ss_pred ECCEEEEEEEeCCEEEEE
Confidence 656566677777765554
No 278
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.68 E-value=0.0092 Score=57.71 Aligned_cols=215 Identities=8% Similarity=-0.036 Sum_probs=114.9
Q ss_pred CCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEE-EEeCCCcEEEEECCCC---ceEEEEEcCCCccceEEEE
Q 019258 91 SGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECV-SVGEDGRVNLVSVIGG---GEFKRVYDGNGLVGFNCVK 164 (343)
Q Consensus 91 dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~-s~s~dg~v~~wd~~~~---~~~~~~~~~~~~~~v~~~~ 164 (343)
...|+..++...+...+.. ....+.+++|. +..|+ +-...+.|..+++... .....+... .......++
T Consensus 385 ~~~I~~id~~~~~~~~~~~----~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~-~~~~P~gla 459 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLA 459 (699)
T ss_dssp TTC-CEECTTSCCEECCSC----CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS-CC--CCCEE
T ss_pred ccceEEEeCCCCcceeeec----cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC-CCCCcceEE
Confidence 3466666665433222221 11234567776 44444 4445678888888751 111122111 111345667
Q ss_pred eCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC-CcEEEEEccCC
Q 019258 165 WAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS-GTVFAWDLRWQ 241 (343)
Q Consensus 165 ~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d-g~v~iwd~~~~ 241 (343)
+.+ ++++++-...+.|.+.++.. .....+..... .....|+++|.+..++++-... +.|..+++...
T Consensus 460 vD~~~g~LY~tD~~~~~I~v~d~dg----~~~~~l~~~~~------~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 460 VDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFREQG------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp CCCSSSBCEECCTTTSCEEEEBSSS----CCEEEECCCSS------CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred EEeeCCcEEEEeccCCeEEEEecCC----CceEEEEeCCC------CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 764 45555555678899998754 33333322111 3357889999776776665433 78888877532
Q ss_pred ceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-cccccccc---cccce
Q 019258 242 QQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFELLAEP---CAINS 317 (343)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~~~~~---~~i~s 317 (343)
....+. ...-..-..|+|+|++.. ..++-+..+.|+.++.... ...+.... ....+
T Consensus 530 -~~~~l~----------~~~l~~PnGlavd~~~~~---------LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~g 589 (699)
T 1n7d_A 530 -DIYSLV----------TENIQWPNGITLDLLSGR---------LYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS 589 (699)
T ss_dssp -CCCEES----------CSSCSSCCCEEECTTTCC---------EEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCC
T ss_pred -CeeEEE----------eCCCCCccEEEEeccCCE---------EEEEecCCCeEEEEccCCCceEEEEecCCcCCCceE
Confidence 221221 111233567999988774 4555567778999887533 22332221 22456
Q ss_pred eeecCCCCCeeEEccCCceEEEEeC
Q 019258 318 FDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 318 ~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
+++..+ ..+++-...+.|..+++
T Consensus 590 lavd~~--~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 590 LAVFED--KVFWTDIINEAIFSANR 612 (699)
T ss_dssp CEEETT--EEEEECSTTTCEEEEET
T ss_pred eEEECC--EEEEEeCCCCeEEEEEc
Confidence 666652 44444455567877754
No 279
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.62 E-value=0.51 Score=44.88 Aligned_cols=221 Identities=7% Similarity=-0.089 Sum_probs=127.2
Q ss_pred eEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccce
Q 019258 84 LVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGF 160 (343)
Q Consensus 84 ~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v 160 (343)
+|+.+ ....|+..++........... .......+++|+ +..+++-..++.|..++++... ...+....-. ..
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~--~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-~~~v~~~g~~-~P 82 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPL--TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-LEHVVEFGLD-YP 82 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCC--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCS-CC
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEc--CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-cEEEEeCCCC-Cc
Confidence 34433 566788888874322221211 123456788887 4445566678889999987652 3444332211 46
Q ss_pred EEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEE-ecCCcEEEEE
Q 019258 161 NCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAG-GSSGTVFAWD 237 (343)
Q Consensus 161 ~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg-~~dg~v~iwd 237 (343)
..+++.+ ++.+++-...+.|.+.++.. .....+.... . .....|+++|....++.+- +..+.|...+
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG----~~~~~l~~~~----l--~~P~~iavdp~~G~lY~tD~g~~~~I~r~~ 152 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDG----QHRQVLVWKD----L--DSPRALALDPAEGFMYWTEWGGKPKIDRAA 152 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTS----TTCEEEECSS----C--CCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCC----CcEEEEEeCC----C--CCcccEEEccCCCeEEEeCCCCCCEEEEEe
Confidence 6777765 55566666688899998855 2222332111 1 4478999999766777765 2367888888
Q ss_pred ccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcccccccc-cccc
Q 019258 238 LRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAEP-CAIN 316 (343)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~-~~i~ 316 (343)
+... ....+. . .-..-..|++++++.. ..++=+..+.|...+......+++... ....
T Consensus 153 ~dG~-~~~~l~----------~-~~~~P~GlalD~~~~~---------LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~ 211 (628)
T 4a0p_A 153 MDGS-ERTTLV----------P-NVGRANGLTIDYAKRR---------LYWTDLDTNLIESSNMLGLNREVIADDLPHPF 211 (628)
T ss_dssp TTSC-SCEEEE----------C-SCSSEEEEEEETTTTE---------EEEEETTTTEEEEEETTSCSCEEEEECCSCEE
T ss_pred CCCC-ceEEEE----------C-CCCCcceEEEccccCE---------EEEEECCCCEEEEEcCCCCceEEeeccCCCce
Confidence 7643 222322 1 1245678999987663 444556677888888754333433332 2234
Q ss_pred eeeecCCCCCeeEEccCCceEEEEeC
Q 019258 317 SFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 317 s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
++++.. + ...++-...+.|+.+++
T Consensus 212 glav~~-~-~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 212 GLTQYQ-D-YIYWTDWSRRSIERANK 235 (628)
T ss_dssp EEEEET-T-EEEEEETTTTEEEEEET
T ss_pred EEEEEC-C-EEEEecCCCCEEEEEEC
Confidence 666665 1 33333334567776654
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.60 E-value=0.39 Score=43.32 Aligned_cols=152 Identities=9% Similarity=0.067 Sum_probs=84.4
Q ss_pred eeEEEcc--CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeC-CC----cEEEEECCC
Q 019258 74 ISSLSTS--HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGE-DG----RVNLVSVIG 144 (343)
Q Consensus 74 v~~v~~~--~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~-dg----~v~~wd~~~ 144 (343)
...|++. ++..|+++...+.|+.++........+.. .......++++ ++.++.+.. ++ .+...+...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~----~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS----GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC----CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec----CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 4556665 23455555444777777776433222221 22346788887 664544443 22 233344332
Q ss_pred CceEEEEEcCCCccceEEEEeCC-CCE-EEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCe
Q 019258 145 GGEFKRVYDGNGLVGFNCVKWAS-PTE-FVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKH 222 (343)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~ 222 (343)
.......+.... ....++++| ... +++-..++.|..+|... .. ...+..... . ..-..++++|++..
T Consensus 215 ~~~~~~~l~~~~--~p~giavdp~~g~lyv~d~~~~~V~~~~~~~---~~-~~~~~~~~~-~----~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 215 GFKVITELTKGQ--NCNGAETHPINGELYFNSWNAGQVFRYDFTT---QE-TTPLFTIQD-S----GWEFHIQFHPSGNY 283 (430)
T ss_dssp TSCSEEEEEECS--SCCCEEECTTTCCEEEEETTTTEEEEEETTT---TE-EEEEEECSS-S----SCCEEEEECTTSSE
T ss_pred ceeeeeeeccCC--CceEEEEeCCCCEEEEEECCCCEEEEEECCC---Cc-EEEEEEcCC-C----CcceeEEEcCCCCE
Confidence 211111111111 356778888 444 44444578899999865 22 212221110 1 34678999999987
Q ss_pred EEEEEecCCcEEEEEccC
Q 019258 223 TCLAGGSSGTVFAWDLRW 240 (343)
Q Consensus 223 ~~~sg~~dg~v~iwd~~~ 240 (343)
++++-..++.|..+|...
T Consensus 284 lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEETTTTEEEEEEEET
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 888878889999988753
No 281
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.55 E-value=0.85 Score=46.65 Aligned_cols=183 Identities=10% Similarity=0.005 Sum_probs=95.1
Q ss_pred cccceeeEEecCCC--CCCCCeEEEEee-cCCCCCCceeeeeCCCCCCCCCCc--cCCCCCCeeEEEcc---CCCeEEEE
Q 019258 17 QSKYIDAVRWLPPL--SPLSKLAVLAIY-DTDADSPSLETHSISLPASLTPHS--QWTPPTRISSLSTS---HQSLVAAS 88 (343)
Q Consensus 17 ~~~~i~~v~w~p~~--~~~~~~l~t~s~-D~~~~~~~l~~w~~~~~~~~~~~~--~~~~~~~v~~v~~~---~~~~l~~~ 88 (343)
-+..|++++..|.. ....++++.|.| |++ +++++++. .+.+. .++.+....++... ...+|..|
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~t-----v~I~sL~~---l~~~~~~~L~~~~~p~si~l~~~~~~~~L~ig 623 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDIS-----ARILKLPS---FELLHKEMLGGEIIPRSILMTTFESSHYLLCA 623 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTE-----EEEEETTT---CCEEEEEECCSSCCEEEEEEEEETTEEEEEEE
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCE-----EEEEECCC---CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEE
Confidence 35679999998742 234689999998 654 77999964 22222 22222345555554 44678899
Q ss_pred cCCCcEEEEEccCc-eeeeeeccCCccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceE-EEE
Q 019258 89 TLSGSLHVLSSAMQ-VLLSVDENSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFN-CVK 164 (343)
Q Consensus 89 s~dg~v~v~~~~~~-~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~-~~~ 164 (343)
-.||.+.-+.+... ..+.-.+.......++.=..+. +..-+-+..+....++.-... ....-.. .. .+. ...
T Consensus 624 l~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~-l~~s~l~-~~--~v~~~~~ 699 (1158)
T 3ei3_A 624 LGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHK-LVFSNVN-LK--EVNYMCP 699 (1158)
T ss_dssp ETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSS-EEEEEBS-SS--CCCEEEE
T ss_pred eCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCc-eEEeccC-hH--HhceEec
Confidence 99999877776521 1111111101123344433333 444444444555555544322 1211111 11 232 334
Q ss_pred eCC---CCEEEEEeCCCcEEEEEccccCCCCCe--eEEecccCCCCCcccCeEEEEEcCCCCeE
Q 019258 165 WAS---PTEFVTGGFGYGLQWWDLRRAGSGGPV--LQFKGNFGSQGKASGMIHSVDIHPSRKHT 223 (343)
Q Consensus 165 ~~~---~~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~v~~~p~~~~~ 223 (343)
|+. ++-++.. .++.++|.-+.. .+.+ .++... ..+..++++|....+
T Consensus 700 F~se~~~~g~v~~-~~~~LrI~~i~~---~~~~~~~~ipL~--------~Tprri~y~~~~~~~ 751 (1158)
T 3ei3_A 700 LNSDGYPDSLALA-NNSTLTIGTIDE---IQKLHIRTVPLY--------ESPRKICYQEVSQCF 751 (1158)
T ss_dssp ECCSSSTTEEEEE-CSSCEEEEEECC---SSSEEEEEEECS--------SEEEEEEEEGGGTEE
T ss_pred cCcccCCCcEEEE-cCCceEEEEecc---cCCeeEEEEeCC--------CCceEEEEcCCCCEE
Confidence 544 3456544 456699988754 2222 223221 447888888875543
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.44 E-value=0.2 Score=45.28 Aligned_cols=152 Identities=11% Similarity=0.145 Sum_probs=88.8
Q ss_pred EEEEec---CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeC-CC----cEEEEEccccC
Q 019258 119 SGVDLT---GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGF-GY----GLQWWDLRRAG 189 (343)
Q Consensus 119 ~~~~~~---~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~-d~----~i~iwd~~~~~ 189 (343)
..++++ +..|..+...+.|..+|+..+ .+..+..... ....+++++ ++.+..+.. ++ .+...+...
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-~v~~~~~~~~--~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-- 214 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-YVSTVYSGLS--KVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-- 214 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTT-EEEEEECCCS--CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG--
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCC-EEEEEecCCC--CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC--
Confidence 455554 244555544478889998876 3554443222 588999999 664555544 22 233344322
Q ss_pred CCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEE
Q 019258 190 SGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQ 269 (343)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 269 (343)
.......+... .....++++|+...++++-..++.|..+|........... ......-..|+
T Consensus 215 ~~~~~~~l~~~--------~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~----------~~~~~~P~gia 276 (430)
T 3tc9_A 215 GFKVITELTKG--------QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT----------IQDSGWEFHIQ 276 (430)
T ss_dssp TSCSEEEEEEC--------SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE----------CSSSSCCEEEE
T ss_pred ceeeeeeeccC--------CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE----------cCCCCcceeEE
Confidence 11111222211 3367888999545677777788999999987643311111 11123456899
Q ss_pred EeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 270 YDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 270 ~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
|+|++.. ..++-...++|+.++..
T Consensus 277 ~~pdG~~---------lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 277 FHPSGNY---------AYIVVVNQHYILRSDYD 300 (430)
T ss_dssp ECTTSSE---------EEEEETTTTEEEEEEEE
T ss_pred EcCCCCE---------EEEEECCCCEEEEEeCC
Confidence 9999873 34455667788887754
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.44 E-value=0.49 Score=42.69 Aligned_cols=152 Identities=11% Similarity=0.026 Sum_probs=83.2
Q ss_pred eeEEEccC---CCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec--CCEEEEEeCC---Cc-EEEEECCC
Q 019258 74 ISSLSTSH---QSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT--GSECVSVGED---GR-VNLVSVIG 144 (343)
Q Consensus 74 v~~v~~~~---~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~s~s~d---g~-v~~wd~~~ 144 (343)
...|++.. ...|+.+...+.|+.++........+.. ......+++++ ++.+++-... .. +...+...
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~----~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT----NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC----CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec----CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 45777762 3556665544788888875443322221 22346788887 6644443321 11 22333222
Q ss_pred CceEEEEEcCCCccceEEEEeCC-CCEEE-EEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCe
Q 019258 145 GGEFKRVYDGNGLVGFNCVKWAS-PTEFV-TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKH 222 (343)
Q Consensus 145 ~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~ 222 (343)
............ ....+++++ ...|. +-..++.|+.+|... +.....+..... . ..-..++++|++..
T Consensus 217 ~~~~~~~~~~~~--~P~giavd~~~G~lyv~d~~~~~V~~~d~~~---g~~~~~~~~~~~-~----~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 217 GFTERLSLCNAR--GAKTCAVHPQNGKIYYTRYHHAMISSYDPAT---GTLTEEEVMMDT-K----GSNFHIVWHPTGDW 286 (433)
T ss_dssp TTCCEEEEEECS--SBCCCEECTTTCCEEECBTTCSEEEEECTTT---CCEEEEEEECSC-C----SSCEEEEECTTSSE
T ss_pred CeeccccccccC--CCCEEEEeCCCCeEEEEECCCCEEEEEECCC---CeEEEEEeccCC-C----CCcccEEEeCCCCE
Confidence 211011111111 356677787 44444 444578899998865 333233322111 1 23457999999987
Q ss_pred EEEEEecCCcEEEEEcc
Q 019258 223 TCLAGGSSGTVFAWDLR 239 (343)
Q Consensus 223 ~~~sg~~dg~v~iwd~~ 239 (343)
++++-...+.|..+|+.
T Consensus 287 LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEETTTTEEEEEEBC
T ss_pred EEEEeCCCCEEEEEeCC
Confidence 88887888999998865
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.42 E-value=0.65 Score=43.86 Aligned_cols=158 Identities=12% Similarity=0.059 Sum_probs=87.9
Q ss_pred EEEEcCCCcEEEEEccCceeeeeeccCCccc--cCeE-EEEecCCEEEEEe------CCCcEEEEECCCCceEEEEEcCC
Q 019258 85 VAASTLSGSLHVLSSAMQVLLSVDENSGFHV--GPIS-GVDLTGSECVSVG------EDGRVNLVSVIGGGEFKRVYDGN 155 (343)
Q Consensus 85 l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~--~~v~-~~~~~~~~~~s~s------~dg~v~~wd~~~~~~~~~~~~~~ 155 (343)
+++++.|+.+..+|..+++.+-..... .+. ..+. ...+.+..++.++ .+|.|..+|..+++..-+.....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~-~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENS-DIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCC-CCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 888889999999998766544222111 110 0111 1111244555544 48999999999986544443221
Q ss_pred Ccc-----------------------------------ce-EEEEeCC-CCEEEEEeCC----------------CcEEE
Q 019258 156 GLV-----------------------------------GF-NCVKWAS-PTEFVTGGFG----------------YGLQW 182 (343)
Q Consensus 156 ~~~-----------------------------------~v-~~~~~~~-~~~l~t~~~d----------------~~i~i 182 (343)
... .+ ...++.+ .+.+..+..+ +.|.-
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 110 00 1234445 5566666554 37888
Q ss_pred EEccccCCCCCeeEEecccCCC---CCcccCeEEEEEc-CCCC--eEEEEEecCCcEEEEEccCCceeeee
Q 019258 183 WDLRRAGSGGPVLQFKGNFGSQ---GKASGMIHSVDIH-PSRK--HTCLAGGSSGTVFAWDLRWQQQSIVL 247 (343)
Q Consensus 183 wd~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~v~~~-p~~~--~~~~sg~~dg~v~iwd~~~~~~~~~~ 247 (343)
+|.++ ++....+....... .....++. ++.. .++. .+++.++.+|.++++|.++++.....
T Consensus 283 ld~~T---G~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 283 RDADT---GEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp EETTT---CCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EeCCC---CceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 99988 77776665432100 00001222 2322 3442 46677899999999999887665444
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.37 E-value=0.84 Score=44.61 Aligned_cols=158 Identities=7% Similarity=-0.057 Sum_probs=94.6
Q ss_pred CCCCeeEEEcc--CCCeEEEEcCCCcEEEEEccCc----eeeeeeccCCccccCeEEEEecC-CEEEEEeCCCcEEEEEC
Q 019258 70 PPTRISSLSTS--HQSLVAASTLSGSLHVLSSAMQ----VLLSVDENSGFHVGPISGVDLTG-SECVSVGEDGRVNLVSV 142 (343)
Q Consensus 70 ~~~~v~~v~~~--~~~~l~~~s~dg~v~v~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~-~~~~s~s~dg~v~~wd~ 142 (343)
....+.+|+|. ++.++++-...+.|+.+++... ....+... ......-.+++|.+ ..+++-...+.|.+.++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~-~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec-CCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 34567788887 4445556666788888887632 11122211 11212223444444 56666677889999998
Q ss_pred CCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeC-C-CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCC
Q 019258 143 IGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGF-G-YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219 (343)
Q Consensus 143 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~ 219 (343)
+... ...+.. ........|++.| ...|..+.. . +.|...++.. .....+.... . .....|++++.
T Consensus 501 dG~~-~~~l~~-~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG----~~~~~lv~~~----l--~~P~GLavD~~ 568 (791)
T 3m0c_C 501 KGVK-RKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG----VDIYSLVTEN----I--QWPNGITLDLL 568 (791)
T ss_dssp TSSS-EEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS----CCEEEEECSS----C--SCEEEEEEETT
T ss_pred CCCe-EEEEEe-CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC----CceEEEEeCC----C--CCceEEEEecC
Confidence 8653 333332 2222588999988 455554443 3 6777777743 3333333211 1 45889999988
Q ss_pred CCeEEEEEecCCcEEEEEccC
Q 019258 220 RKHTCLAGGSSGTVFAWDLRW 240 (343)
Q Consensus 220 ~~~~~~sg~~dg~v~iwd~~~ 240 (343)
...|+++-...+.|...|+..
T Consensus 569 ~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 569 SGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTS
T ss_pred CCeEEEEeCCCCcEEEEecCC
Confidence 778888877788899999864
No 286
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.28 E-value=0.63 Score=43.68 Aligned_cols=114 Identities=10% Similarity=-0.016 Sum_probs=66.5
Q ss_pred CCeEEEEcC-CCcEEEEEc-cCceeeeeeccCCc---cc-----cCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEE
Q 019258 82 QSLVAASTL-SGSLHVLSS-AMQVLLSVDENSGF---HV-----GPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 82 ~~~l~~~s~-dg~v~v~~~-~~~~~~~~~~~~~~---h~-----~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~ 151 (343)
++.+++++. ++.|..+|. .+++.+=....... +. .....+.+.+..++.++.|+.|..+|..+++..-+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 566777777 788888888 65554321111100 00 001123344778888899999999999998644443
Q ss_pred EcCCCccceEEEEeCC---CCEEEEEeC------CCcEEEEEccccCCCCCeeEEec
Q 019258 152 YDGNGLVGFNCVKWAS---PTEFVTGGF------GYGLQWWDLRRAGSGGPVLQFKG 199 (343)
Q Consensus 152 ~~~~~~~~v~~~~~~~---~~~l~t~~~------d~~i~iwd~~~~~~~~~~~~~~~ 199 (343)
...... .-..+...| .+.++.++. ++.|..+|.++ ++.+.++..
T Consensus 142 ~~~~~~-~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~t---G~~~W~~~~ 194 (571)
T 2ad6_A 142 EVCDPK-VGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKT---GELKWRAFA 194 (571)
T ss_dssp ECCCGG-GTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTT---CCEEEEEES
T ss_pred cCCCCC-ccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCC---CcEEEEEcc
Confidence 221100 000111112 456666665 79999999998 777766553
No 287
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.24 E-value=0.45 Score=40.19 Aligned_cols=195 Identities=12% Similarity=0.089 Sum_probs=94.9
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCC--CCCCCccCCCCCCeeEEEccCCCeEEEEcCC-----CcEEEEEccCceee
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPA--SLTPHSQWTPPTRISSLSTSHQSLVAASTLS-----GSLHVLSSAMQVLL 105 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~--~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~d-----g~v~v~~~~~~~~~ 105 (343)
++.+++.|+.++....-.++.++..... .+..+..++.+-.-.++...++.+++.|+.+ ..+.+||....+-.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 4567777877643222346777775533 0222333333222223333356666666643 35778887644322
Q ss_pred eeeccCCccccCeEEEEecCCEEEEEeCC-----CcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCC---
Q 019258 106 SVDENSGFHVGPISGVDLTGSECVSVGED-----GRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG--- 177 (343)
Q Consensus 106 ~~~~~~~~h~~~v~~~~~~~~~~~s~s~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d--- 177 (343)
.+.... ........+...+..++.|+.+ ..+..+|+.+.+ -..+........-.++....+..++.|+.+
T Consensus 142 ~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 142 MLGDMQ-TAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGH-WTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA 219 (301)
T ss_dssp EEEECS-SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred ECCCCC-CCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCc-EEeCCCCCcccccceEEEECCEEEEEeCCCCCc
Confidence 222211 1111122333346666777654 458889988763 333321111101112222235566777664
Q ss_pred --CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC-----cEEEEEccC
Q 019258 178 --YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG-----TVFAWDLRW 240 (343)
Q Consensus 178 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg-----~v~iwd~~~ 240 (343)
..+.+||+.+ .....+......+ ....++.+ + ..+++.|+.++ .|.+||+++
T Consensus 220 ~~~~v~~yd~~~----~~W~~~~~~p~~r----~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 220 HLSSVEAYNIRT----DSWTTVTSMTTPR----CYVGATVL--R-GRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp BCCCEEEEETTT----TEEEEECCCSSCC----BSCEEEEE--T-TEEEEECCBCSSSBEEEEEEEETTT
T ss_pred ccceEEEEeCCC----CcEEECCCCCCcc----cceeEEEE--C-CEEEEEcCcCCCcccccEEEEcCCC
Confidence 5688999876 3333332211111 11223333 2 35777777653 577888765
No 288
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.08 E-value=0.78 Score=41.38 Aligned_cols=153 Identities=8% Similarity=0.012 Sum_probs=87.0
Q ss_pred eEEEEecC----CEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCC-----cEEEEEccc
Q 019258 118 ISGVDLTG----SECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGY-----GLQWWDLRR 187 (343)
Q Consensus 118 v~~~~~~~----~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~-----~i~iwd~~~ 187 (343)
-..+.+.. ..|..+...+.|+.+|..++ .+..+..... ....+++.+ ++ |..+...+ .+...+...
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-~v~~~~~~~~--~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-YVDIKTTNIG--QCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTT-EEEEECCCCS--CEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCC-EEEEeecCCC--CccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 35667762 55655554488999998777 3555443222 588999999 55 44444321 233333322
Q ss_pred cCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEE
Q 019258 188 AGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWE 267 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 267 (343)
.......+.. . .....++++|....++++-..++.|+.+|...+.....+... .....-..
T Consensus 217 --~~~~~~~~~~-~-------~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~---------~~~~~~~~ 277 (433)
T 4hw6_A 217 --GFTERLSLCN-A-------RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM---------DTKGSNFH 277 (433)
T ss_dssp --TTCCEEEEEE-C-------SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC---------SCCSSCEE
T ss_pred --Ceeccccccc-c-------CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc---------CCCCCccc
Confidence 1111111211 1 335678899944467667667889999998754431222211 11122346
Q ss_pred EEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 268 VQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 268 v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
|+|+|++.. ..++-...++|+.++..
T Consensus 278 ia~dpdG~~---------LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 278 IVWHPTGDW---------AYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEECTTSSE---------EEEEETTTTEEEEEEBC
T ss_pred EEEeCCCCE---------EEEEeCCCCEEEEEeCC
Confidence 999999873 34455667789887754
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.01 E-value=0.068 Score=51.62 Aligned_cols=154 Identities=7% Similarity=-0.043 Sum_probs=87.9
Q ss_pred CCeeEEEcc-CCCeEEEE-cCCCcEEEEEccC----ceeeeeeccCCccccCeEEEEe--c-CCEEEEEeCCCcEEEEEC
Q 019258 72 TRISSLSTS-HQSLVAAS-TLSGSLHVLSSAM----QVLLSVDENSGFHVGPISGVDL--T-GSECVSVGEDGRVNLVSV 142 (343)
Q Consensus 72 ~~v~~v~~~-~~~~l~~~-s~dg~v~v~~~~~----~~~~~~~~~~~~h~~~v~~~~~--~-~~~~~s~s~dg~v~~wd~ 142 (343)
..+.+|+|. ....|+.+ ...+.|+.+++.. .....+.. ........+++ . +..+++-...+.|.+.++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~---~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC---SCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe---CCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 456677887 44555544 4567888888763 11111111 01112234444 3 555566567788999998
Q ss_pred CCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeC-C-CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCC
Q 019258 143 IGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGF-G-YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS 219 (343)
Q Consensus 143 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~ 219 (343)
.... ...+.. ........+++.| ...|..+.. . +.|...++.. .....+.... . ...+.|+++|.
T Consensus 483 dg~~-~~~l~~-~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG----~~~~~l~~~~----l--~~PnGlavd~~ 550 (699)
T 1n7d_A 483 KGVK-RKTLFR-EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG----VDIYSLVTEN----I--QWPNGITLDLL 550 (699)
T ss_dssp SSCC-EEEECC-CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS----CCCCEESCSS----C--SSCCCEEECTT
T ss_pred CCCc-eEEEEe-CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC----CCeeEEEeCC----C--CCccEEEEecc
Confidence 7652 333332 2212467788887 444433332 2 6777776643 2222221111 1 44678999998
Q ss_pred CCeEEEEEecCCcEEEEEccC
Q 019258 220 RKHTCLAGGSSGTVFAWDLRW 240 (343)
Q Consensus 220 ~~~~~~sg~~dg~v~iwd~~~ 240 (343)
+..++++-+..+.|..+|+..
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSS
T ss_pred CCEEEEEecCCCeEEEEccCC
Confidence 878888888888999999864
No 290
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.76 E-value=0.85 Score=43.03 Aligned_cols=114 Identities=14% Similarity=0.075 Sum_probs=64.6
Q ss_pred CCeEEEEcC-CCcEEEEEc-cCceeeeeeccCCc-cc-------cCeEEEEe--cCCE----EEEEeCCCcEEEEECCCC
Q 019258 82 QSLVAASTL-SGSLHVLSS-AMQVLLSVDENSGF-HV-------GPISGVDL--TGSE----CVSVGEDGRVNLVSVIGG 145 (343)
Q Consensus 82 ~~~l~~~s~-dg~v~v~~~-~~~~~~~~~~~~~~-h~-------~~v~~~~~--~~~~----~~s~s~dg~v~~wd~~~~ 145 (343)
++.+++++. ++.|..+|. .+++.+=....... .. .....+.+ .+.. ++.++.|+.|..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 566777777 788888888 65544311111000 00 00122344 4444 788889999999999998
Q ss_pred ceEEEEEcCCCccceEEEEeCC---CCEEEEEeC------CCcEEEEEccccCCCCCeeEEec
Q 019258 146 GEFKRVYDGNGLVGFNCVKWAS---PTEFVTGGF------GYGLQWWDLRRAGSGGPVLQFKG 199 (343)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~~~---~~~l~t~~~------d~~i~iwd~~~~~~~~~~~~~~~ 199 (343)
+..-+....... .-..+...| ...++.++. ++.|+-+|.++ ++.+.++..
T Consensus 142 ~~~W~~~~~~~~-~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~T---G~~~W~~~~ 200 (599)
T 1w6s_A 142 ETVWKVENSDIK-VGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKT---GEQVWRAYA 200 (599)
T ss_dssp CEEEEEECCCGG-GTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTT---CCEEEEEES
T ss_pred CEEEeecCCCCC-ccceeecCCEEECCEEEEEecccccCCCCeEEEEECCC---CcEEEEEcC
Confidence 654443221100 000111112 456666653 89999999998 777766653
No 291
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.75 E-value=1.3 Score=41.53 Aligned_cols=161 Identities=13% Similarity=0.049 Sum_probs=87.5
Q ss_pred CCeEEEEcCCCcEEEEEccCceeeeeeccCC------ccccCeEEEE-ecCC-EEEEEe------CCCcEEEEECCCCce
Q 019258 82 QSLVAASTLSGSLHVLSSAMQVLLSVDENSG------FHVGPISGVD-LTGS-ECVSVG------EDGRVNLVSVIGGGE 147 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~------~h~~~v~~~~-~~~~-~~~s~s------~dg~v~~wd~~~~~~ 147 (343)
++.+++++.|+.+..+|..+++.+-...... ....++..=. ..++ .++.++ .+|.|..+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 6778888899999999987665542221110 0112221100 0012 455544 378999999998864
Q ss_pred EEEEEcCCCc----------------------------------------cceEEEEeCC-CCEEEEEeC----------
Q 019258 148 FKRVYDGNGL----------------------------------------VGFNCVKWAS-PTEFVTGGF---------- 176 (343)
Q Consensus 148 ~~~~~~~~~~----------------------------------------~~v~~~~~~~-~~~l~t~~~---------- 176 (343)
.-... .... ..-...++.+ .+.+..+..
T Consensus 197 ~W~~~-~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 197 IWMRP-FVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEE-SSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EeecC-CCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 43322 1100 0001234455 455555542
Q ss_pred ----------C----CcEEEEEccccCCCCCeeEEecccCCC---CCcccCeEEEEEc-CCCC--eEEEEEecCCcEEEE
Q 019258 177 ----------G----YGLQWWDLRRAGSGGPVLQFKGNFGSQ---GKASGMIHSVDIH-PSRK--HTCLAGGSSGTVFAW 236 (343)
Q Consensus 177 ----------d----~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~v~~~-p~~~--~~~~sg~~dg~v~iw 236 (343)
| +.|.-+|.++ ++....+....... .....++. +... .++. .+++.++.+|.++++
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~T---G~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~l 351 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSS---GEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVV 351 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTT---CCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEE
T ss_pred ccCCCcccccCCcccceEEEEeCCC---CCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEE
Confidence 2 5799999988 77777665321000 00002222 2221 3443 467789999999999
Q ss_pred EccCCceeeee
Q 019258 237 DLRWQQQSIVL 247 (343)
Q Consensus 237 d~~~~~~~~~~ 247 (343)
|.++++.....
T Consensus 352 D~~tG~~lw~~ 362 (582)
T 1flg_A 352 DRSNGKLQNAF 362 (582)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEeccc
Confidence 99887655443
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.72 E-value=0.93 Score=39.45 Aligned_cols=187 Identities=12% Similarity=0.111 Sum_probs=103.3
Q ss_pred CEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCC-----C---EEEEE-eC--CCcEEEEEccccCCCCCe
Q 019258 126 SECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASP-----T---EFVTG-GF--GYGLQWWDLRRAGSGGPV 194 (343)
Q Consensus 126 ~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~---~l~t~-~~--d~~i~iwd~~~~~~~~~~ 194 (343)
..++.....+-+.++|+ +++ ....+.. . .+..+..-|+ . .+++. -. +++|.+|++.. ...++
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~-~l~~~~~-g--~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp--~~~~l 113 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGK-MLHSYNT-G--KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG--KNGTL 113 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSC-EEEEECC-S--CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT--TTCCE
T ss_pred cEEEEEcCCCCEEEEcC-CCc-EEEEccC-C--CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC--CCCce
Confidence 45666677788999999 554 3444432 2 3455444331 1 22333 33 58999997732 12345
Q ss_pred eEEecc--cCCCCCcccCeEEEEE--cCC-CCeEEEEEecCCcEEEEEccCC------ceeeeeecCCCCcccccCCccc
Q 019258 195 LQFKGN--FGSQGKASGMIHSVDI--HPS-RKHTCLAGGSSGTVFAWDLRWQ------QQSIVLSGVGTGEAVTHSLSES 263 (343)
Q Consensus 195 ~~~~~~--~~~~~~~~~~i~~v~~--~p~-~~~~~~sg~~dg~v~iwd~~~~------~~~~~~~~~~~~~~~~~~~h~~ 263 (343)
..+... .-.... ..+..+++ +|. +...+++...+|.+..|++... ...+..+. ..+
T Consensus 114 ~~i~~~~~pv~t~~--~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-----------lgs 180 (355)
T 3amr_A 114 QSMTDPDHPIATAI--NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-----------MNS 180 (355)
T ss_dssp EECSCTTSCEECCC--SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-----------CSS
T ss_pred eeccccccCcCCCC--CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-----------CCC
Confidence 544211 000000 33566776 674 4334556778899999998431 11112221 234
Q ss_pred cEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc---cccc---ccc---cccceeeecC-CCCC-eeEEcc
Q 019258 264 EVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP---FELL---AEP---CAINSFDIDP-QNPS-DVICSL 332 (343)
Q Consensus 264 ~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~---~~~~---~~~---~~i~s~~~~~-~~~~-~l~~~~ 332 (343)
.+-.+...+... .|+.+-+|..||.++..... ..+. ... ..+-.+++-+ .++. +|+.++
T Consensus 181 q~EgcvvDd~~g----------~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 181 QTEGMAADDEYG----------RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp CEEEEEEETTTT----------EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred CcceEEEcCCCC----------eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 677888887766 78999999888777743111 1111 111 2466677732 1234 677766
Q ss_pred -CCceEEEEeC
Q 019258 333 -EWESIAIVSR 342 (343)
Q Consensus 333 -~~~~i~~~~~ 342 (343)
.+..+.+|++
T Consensus 251 QG~~s~~Vydr 261 (355)
T 3amr_A 251 QGNSSYAIYDR 261 (355)
T ss_dssp GGGTEEEEEES
T ss_pred CCCCEEEEEEC
Confidence 4458888876
No 293
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.71 E-value=1 Score=40.01 Aligned_cols=198 Identities=5% Similarity=-0.075 Sum_probs=113.4
Q ss_pred CCCCCeeEEEcc-CCC-eEEEEcCCCcEEEEEccCce----eeeeeccCCccccCeEEEEec---CCEEEEEeCCCcEEE
Q 019258 69 TPPTRISSLSTS-HQS-LVAASTLSGSLHVLSSAMQV----LLSVDENSGFHVGPISGVDLT---GSECVSVGEDGRVNL 139 (343)
Q Consensus 69 ~~~~~v~~v~~~-~~~-~l~~~s~dg~v~v~~~~~~~----~~~~~~~~~~h~~~v~~~~~~---~~~~~s~s~dg~v~~ 139 (343)
.....+.+|+|. .++ ++.+-...+.|+.+++.... ...+.. ........+++. +..+++-...+.|.+
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~---~~~~~p~glavD~~~~~lY~~d~~~~~I~~ 185 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---RDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 185 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe---CCCCCcccEEEEecCCceEEEECCCCeEEE
Confidence 344678899998 444 45555567888888876311 111111 112234555554 555566667888999
Q ss_pred EECCCCceEEEEEcCCCccceEEEEeCC-CCEEEEEeC--CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEE
Q 019258 140 VSVIGGGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGF--GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDI 216 (343)
Q Consensus 140 wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~ 216 (343)
.+++... ...+... .......++..| ...+.-+.. .+.|...++.. .....+.... . ...+.|++
T Consensus 186 ~~~~g~~-~~~l~~~-~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG----~~~~~~~~~~----l--~~P~glav 253 (400)
T 3p5b_L 186 ADTKGVK-RKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG----VDIYSLVTEN----I--QWPNGITL 253 (400)
T ss_dssp ECTTTCS-EEEEEEC-SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS----CSCEEEECSS----C--SCEEEEEE
T ss_pred EeCCCCc-eEEEEeC-CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC----CccEEEEECC----C--CceEEEEE
Confidence 9987653 3333322 222578999988 555554442 36788777744 3333332111 1 45789999
Q ss_pred cCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeE
Q 019258 217 HPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGIL 296 (343)
Q Consensus 217 ~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i 296 (343)
+|.+..++.+-...+.|..+|+.. .....+... ......-..|++. +.. .+++-...+.|
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~--------~~~l~~P~gl~v~--~~~---------lywtd~~~~~V 313 (400)
T 3p5b_L 254 DLLSGRLYWVDSKLHSISSIDVNG-GNRKTILED--------EKRLAHPFSLAVF--EDK---------VFWTDIINEAI 313 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTS-CCCEEEEEC--------SSTTSSEEEEEEE--TTE---------EEEEESSSCSE
T ss_pred EeCCCEEEEEECCCCEEEEEeCCC-CccEEEEeC--------CCCCCCCEEEEEe--CCE---------EEEecCCCCeE
Confidence 998888888877888999999864 333333210 1111223456553 232 45566666777
Q ss_pred EEEec
Q 019258 297 AVVEQ 301 (343)
Q Consensus 297 ~~~~~ 301 (343)
+.++.
T Consensus 314 ~~~~~ 318 (400)
T 3p5b_L 314 FSANR 318 (400)
T ss_dssp EEEES
T ss_pred EEEEc
Confidence 77763
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.71 E-value=0.9 Score=39.19 Aligned_cols=163 Identities=10% Similarity=0.053 Sum_probs=94.6
Q ss_pred EEEEec--CCEEEEEe-CCCcEEEEECCCCceEEEE-EcC-----CCccceEEEEe---CCCCEEEEEeC----------
Q 019258 119 SGVDLT--GSECVSVG-EDGRVNLVSVIGGGEFKRV-YDG-----NGLVGFNCVKW---ASPTEFVTGGF---------- 176 (343)
Q Consensus 119 ~~~~~~--~~~~~s~s-~dg~v~~wd~~~~~~~~~~-~~~-----~~~~~v~~~~~---~~~~~l~t~~~---------- 176 (343)
.++.|. ...|..++ ..++|..||...+. ...+ +.. .....+..+.+ .+.++|+.+..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~-~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS-HFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCC-EEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCe-EEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 356665 45555555 78999999997653 2333 221 11113689999 56554444333
Q ss_pred ----CCcEEEEEcc---ccCCCCCeeEEecc--cCC----CCCcccCeEEEEEcCCCCeEEEEEecC-CcEEEEEccCCc
Q 019258 177 ----GYGLQWWDLR---RAGSGGPVLQFKGN--FGS----QGKASGMIHSVDIHPSRKHTCLAGGSS-GTVFAWDLRWQQ 242 (343)
Q Consensus 177 ----d~~i~iwd~~---~~~~~~~~~~~~~~--~~~----~~~~~~~i~~v~~~p~~~~~~~sg~~d-g~v~iwd~~~~~ 242 (343)
+..|..+|+. + ++.+...... ... .+........++..++|. ..++++.- +.|...|.....
T Consensus 95 ~~~g~~~v~~~Dl~~~~t---g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~~ 170 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSEN---SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADGKT 170 (334)
T ss_dssp CSSSCCEEEEEESSCCTT---CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTSCC
T ss_pred ccCCCCEEEEEcCCcCCC---CCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCCCE
Confidence 6789999998 5 5555443311 100 000003478999999875 56778887 887777765321
Q ss_pred eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 243 QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
...-..... . .......+.|+++|++. .|+....+|.|..++..
T Consensus 171 ~~~~~~~~~-~-----~~~~~G~nGIv~~pdg~----------~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 171 VSTFAWESG-N-----GGQRPGYSGITFDPHSN----------KLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEEECCC-C-----SSSCCSCSEEEEETTTT----------EEEEESSSSSEEEEECS
T ss_pred EeeeeecCC-C-----cccccCcceEEEeCCCC----------EEEEEcCCCeEEEEcCC
Confidence 111111000 0 11123467899999988 45555449999988865
No 295
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.69 E-value=0.83 Score=38.65 Aligned_cols=193 Identities=6% Similarity=0.000 Sum_probs=92.3
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCC------CcEEEEEccCceeee
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLS------GSLHVLSSAMQVLLS 106 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~d------g~v~v~~~~~~~~~~ 106 (343)
++.+++.|+.+ ....-.++.++..... +..+..++.+-.-.++...++.+++.|+.+ ..+.+||.....-..
T Consensus 55 ~~~lyv~GG~~-~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQ-LFPIKRMDCYNVVKDS-WYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBS-SSBCCEEEEEETTTTE-EEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCC-CCCcceEEEEeCCCCe-EEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 45677777766 2222245677765432 222223332222222222356677777654 468888887543222
Q ss_pred eeccCCccccCeEEEEecCCEEEEEeC---------CCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCC
Q 019258 107 VDENSGFHVGPISGVDLTGSECVSVGE---------DGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG 177 (343)
Q Consensus 107 ~~~~~~~h~~~v~~~~~~~~~~~s~s~---------dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d 177 (343)
+.... ........+...+..++.|+. -..+..||..+.+ -..+........-.++....+..++.|+.+
T Consensus 133 ~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSML-TQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET-WTELCPMIEARKNHGLVFVKDKIFAVGGQN 210 (306)
T ss_dssp ECCCS-SCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEECCEE
T ss_pred CCCCc-CCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe-EEECCCccchhhcceEEEECCEEEEEeCCC
Confidence 22111 111112233334666666653 3458889998863 333321111101122222345566666653
Q ss_pred -----CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC-----CcEEEEEccC
Q 019258 178 -----YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS-----GTVFAWDLRW 240 (343)
Q Consensus 178 -----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d-----g~v~iwd~~~ 240 (343)
..+.+||+.. .....+......+ ....++.+ +..+++.|+.+ ..+.+||+.+
T Consensus 211 ~~~~~~~~~~yd~~~----~~W~~~~~~p~~r----~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKL----NEWKMVSPMPWKG----VTVKCAAV---GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp TTEEBCCEEEEETTT----TEEEECCCCSCCB----SCCEEEEE---TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CCCCCceEEEeeCCC----CcEEECCCCCCCc----cceeEEEE---CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 4678888866 2233332111101 22233333 24577778754 4577888765
No 296
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.45 E-value=1.7 Score=40.77 Aligned_cols=60 Identities=17% Similarity=0.160 Sum_probs=38.8
Q ss_pred CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeee
Q 019258 177 GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248 (343)
Q Consensus 177 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~ 248 (343)
++.|.-||+.+ ++.+.+...... ...++ +.. .+. +++.|+.||.++.||.++++....+.
T Consensus 465 ~G~l~A~D~~t---G~~~W~~~~~~~---~~~g~---~~t--agg-lvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVS---GKVVWEHKEHLP---LWAGV---LAT--AGN-LVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTT---CCEEEEEEESSC---CCSCC---EEE--TTT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEECCC---CCEEEEecCCCC---Ccccc---eEe--CCC-EEEEECCCCcEEEEECCCCCEEEEec
Confidence 67899999988 776666543210 00011 111 233 45668999999999999987766654
No 297
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.18 E-value=1.3 Score=37.61 Aligned_cols=194 Identities=12% Similarity=0.037 Sum_probs=90.4
Q ss_pred CCCeEEEEee----cCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCC-----CcEEEEEccCce
Q 019258 33 LSKLAVLAIY----DTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLS-----GSLHVLSSAMQV 103 (343)
Q Consensus 33 ~~~~l~t~s~----D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~d-----g~v~v~~~~~~~ 103 (343)
++.+++.|+. ++....-.++.+|..... +..+..++.+-.-.++...++.+++.|+.+ ..+.+||....+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ-WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTE-EEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCe-EeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 4567777776 322112246677765432 222222222211122222356666666543 357788876443
Q ss_pred eeeeeccCCccccCeEEEEecCCEEEEEeCC-----CcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCC-
Q 019258 104 LLSVDENSGFHVGPISGVDLTGSECVSVGED-----GRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG- 177 (343)
Q Consensus 104 ~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d- 177 (343)
-..+.... ........+.+.+..++.|+.+ ..+..||+.+.+ -...........-.++....+..++.|+.+
T Consensus 149 W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 226 (308)
T 1zgk_A 149 WHLVAPML-TRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE-WRMITAMNTIRSGAGVCVLHNCIYAAGGYDG 226 (308)
T ss_dssp EEECCCCS-SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EeECCCCC-ccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCe-EeeCCCCCCccccceEEEECCEEEEEeCCCC
Confidence 22222111 1111122333346666777654 458888987763 222211111101122222345566777664
Q ss_pred ----CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC-----cEEEEEccC
Q 019258 178 ----YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG-----TVFAWDLRW 240 (343)
Q Consensus 178 ----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg-----~v~iwd~~~ 240 (343)
..+.+||+.. .....+......+ .....+.+ +..+++.|+.++ .+.+||+.+
T Consensus 227 ~~~~~~v~~yd~~~----~~W~~~~~~p~~r----~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 227 QDQLNSVERYDVET----ETWTFVAPMKHRR----SALGITVH---QGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp SSBCCCEEEEETTT----TEEEECCCCSSCC----BSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCccceEEEEeCCC----CcEEECCCCCCCc----cceEEEEE---CCEEEEEcCcCCCcccceEEEEcCCC
Confidence 5688899866 2233322111101 11222222 235777777543 467777765
No 298
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.87 E-value=1.5 Score=36.87 Aligned_cols=195 Identities=15% Similarity=0.076 Sum_probs=93.3
Q ss_pred CCCeEEEEe-ecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCC-----CcEEEEEccCce---
Q 019258 33 LSKLAVLAI-YDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLS-----GSLHVLSSAMQV--- 103 (343)
Q Consensus 33 ~~~~l~t~s-~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~d-----g~v~v~~~~~~~--- 103 (343)
++.+++.|+ .+.....-.++.++..... +..+..++.+-.-.++...++.+++.|+.+ ..+.+||.....
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQE-WSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCe-EEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 456788887 4322222246677775432 222222332221222222356677777654 468888877443
Q ss_pred eeeeeccCCccccCeEEEEecCCEEEEEeCC-----CcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCC-
Q 019258 104 LLSVDENSGFHVGPISGVDLTGSECVSVGED-----GRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG- 177 (343)
Q Consensus 104 ~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d- 177 (343)
-..+.... ........+...+..++.|+.+ ..+.++|..+.+ -..+........-.++....+..++.|+.+
T Consensus 93 W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 170 (301)
T 2vpj_A 93 WYSVAPMN-VRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ-WSMLGDMQTAREGAGLVVASGVIYCLGGYDG 170 (301)
T ss_dssp CEEECCCS-SCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE-EEEEEECSSCCBSCEEEEETTEEEEECCBCS
T ss_pred eEECCCCC-CCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCe-EEECCCCCCCcccceEEEECCEEEEECCCCC
Confidence 22222111 1111122333346666666644 357888987763 222221111101122222235566666654
Q ss_pred ----CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC-----CcEEEEEccCC
Q 019258 178 ----YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS-----GTVFAWDLRWQ 241 (343)
Q Consensus 178 ----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d-----g~v~iwd~~~~ 241 (343)
..+..||+.+ .....+......+ ....++.+ +..+++.|+.+ ..+.+||+++.
T Consensus 171 ~~~~~~~~~~d~~~----~~W~~~~~~p~~r----~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 171 LNILNSVEKYDPHT----GHWTNVTPMATKR----SGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp SCBCCCEEEEETTT----TEEEEECCCSSCC----BSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CcccceEEEEeCCC----CcEEeCCCCCccc----ccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 5688888866 2333332111111 11223333 24677788764 46889998764
No 299
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.19 E-value=3 Score=37.35 Aligned_cols=160 Identities=11% Similarity=0.094 Sum_probs=89.3
Q ss_pred CCEEEEEeCCCcEEEEECCCCceEEEEEcCC--CccceEEEEeCCCCEEEEEeCCCcEEEEEccccC-CCC------C--
Q 019258 125 GSECVSVGEDGRVNLVSVIGGGEFKRVYDGN--GLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG-SGG------P-- 193 (343)
Q Consensus 125 ~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~-~~~------~-- 193 (343)
+..++.+- ++.||.-++......+.+.... ....+..+..+|.+.+++-..+.+|.+-.+..+. ... +
T Consensus 32 ~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q 110 (452)
T 3pbp_A 32 GTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQ 110 (452)
T ss_dssp TTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTE
T ss_pred CCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccc
Confidence 44444332 3567777766432222222221 1114777888995556666678899999886300 001 1
Q ss_pred eeEEecccCCCCCcccCeEEEEEcCCCCe--EEEEEecCCcEEEEEccC-CceeeeeecCCCCcccccCCccccEEEEEE
Q 019258 194 VLQFKGNFGSQGKASGMIHSVDIHPSRKH--TCLAGGSSGTVFAWDLRW-QQQSIVLSGVGTGEAVTHSLSESEVWEVQY 270 (343)
Q Consensus 194 ~~~~~~~~~~~~~~~~~i~~v~~~p~~~~--~~~sg~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 270 (343)
.+.+..... +.....+|..+.|||-+.. .+++=.+|+.|++||+.. ...|..+. .. ....-.......|.+++|
T Consensus 111 ~~ty~l~~~-~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~-k~-~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 111 IFHYSIDEE-EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLN-KP-NNSFGLDARVNDITDLEF 187 (452)
T ss_dssp EEEEEGGGC-C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEES-CC-CSEEESCSSCCCEEEEEE
T ss_pred eeEEEcCCc-ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchh-cc-ccccCCCcccceEEEEEE
Confidence 112222110 1111267999999998743 667889999999999975 33444221 00 001111233467889999
Q ss_pred eecCCCCcCCCCCccceEE--EecCCeEEE
Q 019258 271 DCHTKSSNISSSRVLPAMF--CSEDGILAV 298 (343)
Q Consensus 271 ~p~~~~~~~~~~~~~~l~s--~s~dg~i~~ 298 (343)
.+++- .|+. .+..|-|+-
T Consensus 188 g~~~l----------TLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 188 SKDGL----------TLYCLNTTEGGDIFA 207 (452)
T ss_dssp CTTSS----------CEEEEECTTSCEEEE
T ss_pred cCCCc----------EEEEEecCCCCCEEE
Confidence 87533 4555 558898874
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.19 E-value=2.6 Score=38.66 Aligned_cols=156 Identities=10% Similarity=0.027 Sum_probs=91.6
Q ss_pred eEEEEec----CCEEEEEeCCCcEEEEECCCCceEEEEEcCCC--ccceEEEEe-------CC-CCEEEEEeCCC-----
Q 019258 118 ISGVDLT----GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNG--LVGFNCVKW-------AS-PTEFVTGGFGY----- 178 (343)
Q Consensus 118 v~~~~~~----~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~--~~~v~~~~~-------~~-~~~l~t~~~d~----- 178 (343)
-..|++. +..+++-...+.|++.|+.++ .+..+..... ......++| ++ ...++.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTT-EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCC-EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3566665 234444444577888998887 3555543321 124788999 88 55466565543
Q ss_pred --cEEEEEccccCCCCCe-----eEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEcc-------CCce-
Q 019258 179 --GLQWWDLRRAGSGGPV-----LQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR-------WQQQ- 243 (343)
Q Consensus 179 --~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~-------~~~~- 243 (343)
.|.+.+... .+... ..+.. . ...+.++++|++..++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~--~G~~~~~~~~~~v~~-~-------~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~ 289 (496)
T 3kya_A 220 SPSVYIIKRNA--DGTFDDRSDIQLIAA-Y-------KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSW 289 (496)
T ss_dssp EEEEEEEECCT--TSCCSTTSCEEEEEE-E-------SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCC
T ss_pred CceEEEEecCC--CCceeecccceeecc-C-------CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceee
Confidence 255665322 11111 12221 1 2356788999777888888889999999987 3322
Q ss_pred ----e-----e-eeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 244 ----S-----I-VLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 244 ----~-----~-~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
+ . .+.. ......-..|+|+|++.. ..++-+....|+.++..
T Consensus 290 tp~~~~~~g~~~~l~~---------~~~~~~p~~ia~~p~G~~---------lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 290 DPIVKNNPNTFKQLFT---------IADPSWEFQIFIHPTGKY---------AYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CCBGGGCTTTEEEEEE---------CSSSSCCEEEEECTTSSE---------EEEEETTTTEEEEEEEE
T ss_pred cccccccccccceeEe---------cCCCCCceEEEEcCCCCE---------EEEEeCCCCEEEEEecC
Confidence 0 0 1110 112234578999999873 34454667788886653
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.92 E-value=2.9 Score=36.33 Aligned_cols=189 Identities=11% Similarity=0.106 Sum_probs=105.4
Q ss_pred CeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec------CCE--E-E-EEeC--CCcEEEEECCCCceEEE
Q 019258 83 SLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT------GSE--C-V-SVGE--DGRVNLVSVIGGGEFKR 150 (343)
Q Consensus 83 ~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~------~~~--~-~-s~s~--dg~v~~wd~~~~~~~~~ 150 (343)
.++++....+-+.+||+. ++.+..... +.++.++.- ++. + + +.-. +++|.+++++.......
T Consensus 41 s~ii~t~k~~gL~Vydl~-G~~l~~~~~-----g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLD-GKMLHSYNT-----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp CEEEEEETTTEEEEEETT-SCEEEEECC-----SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred cEEEEEcCCCCEEEEcCC-CcEEEEccC-----CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 456666667889999994 555544321 355665554 222 2 3 3333 58999997742111233
Q ss_pred EEcC------CCccceEEEEe--CC-CC--EEEEEeCCCcEEEEEccccCC----CCCeeEEecccCCCCCcccCeEEEE
Q 019258 151 VYDG------NGLVGFNCVKW--AS-PT--EFVTGGFGYGLQWWDLRRAGS----GGPVLQFKGNFGSQGKASGMIHSVD 215 (343)
Q Consensus 151 ~~~~------~~~~~v~~~~~--~~-~~--~l~t~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~v~ 215 (343)
.... .....++.+++ ++ .+ +++....++.+..|++..... .+.+.+|... +.+..+.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg--------sq~Egcv 186 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN--------SQTEGMA 186 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS--------SCEEEEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC--------CCcceEE
Confidence 2211 11125677777 55 33 577777799999999954111 2334445432 4577888
Q ss_pred EcCCCCeEEEEEecCCcEEEEEccCC----ceeeeeecCCCCcccccCCccccEEEEEEee--cCCCCcCCCCCccceEE
Q 019258 216 IHPSRKHTCLAGGSSGTVFAWDLRWQ----QQSIVLSGVGTGEAVTHSLSESEVWEVQYDC--HTKSSNISSSRVLPAMF 289 (343)
Q Consensus 216 ~~p~~~~~~~sg~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p--~~~~~~~~~~~~~~l~s 289 (343)
.++....+ ..+-++.-|..+|.+-. ...+..... ......+-.|+.-+ ++.. +.++|
T Consensus 187 vDd~~g~L-yv~eEd~GIw~~da~p~~~~~~~~v~~~~~--------g~l~aDvEGLai~~~~~g~g--------yLivS 249 (355)
T 3amr_A 187 ADDEYGRL-YIAEEDEAIWKFSAEPDGGSNGTVIDRADG--------RHLTRDIEGLTIYYAADGKG--------YLMAS 249 (355)
T ss_dssp EETTTTEE-EEEETTTEEEEEECSTTSCSCCEEEEEBSS--------SSBCSCEEEEEEEECGGGCE--------EEEEE
T ss_pred EcCCCCeE-EEecccceEEEEeCCcCCCCCceEEEEecC--------CccccCcceEEEEecCCCCE--------EEEEE
Confidence 88876555 56778766666665421 122222210 11234577777753 3332 04455
Q ss_pred EecCCeEEEEecC
Q 019258 290 CSEDGILAVVEQG 302 (343)
Q Consensus 290 ~s~dg~i~~~~~~ 302 (343)
+-.++++.+|+..
T Consensus 250 sQG~~s~~Vydr~ 262 (355)
T 3amr_A 250 SQGNSSYAIYDRQ 262 (355)
T ss_dssp EGGGTEEEEEESS
T ss_pred cCCCCEEEEEECC
Confidence 5467789999874
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=93.88 E-value=2.9 Score=36.06 Aligned_cols=161 Identities=14% Similarity=0.104 Sum_probs=96.7
Q ss_pred eeEEEcc-CCCeEEEEc-CCCcEEEEEccCceeeeeeccCC-c--c--ccCeEEEEe---c--CCEEEEEe---------
Q 019258 74 ISSLSTS-HQSLVAAST-LSGSLHVLSSAMQVLLSVDENSG-F--H--VGPISGVDL---T--GSECVSVG--------- 132 (343)
Q Consensus 74 v~~v~~~-~~~~l~~~s-~dg~v~v~~~~~~~~~~~~~~~~-~--h--~~~v~~~~~---~--~~~~~s~s--------- 132 (343)
-.+.+|. ....|..++ ..|+|..|+...+....+ .... . . ...+.++.| . +..+++..
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 3577887 445555555 799999999874322222 1111 0 1 113578888 4 44444333
Q ss_pred ----CCCcEEEEECC---CCceEEEEEc-CC----------CccceEEEEeCC-CCEEEEEeCC-CcEEEEEccccCCCC
Q 019258 133 ----EDGRVNLVSVI---GGGEFKRVYD-GN----------GLVGFNCVKWAS-PTEFVTGGFG-YGLQWWDLRRAGSGG 192 (343)
Q Consensus 133 ----~dg~v~~wd~~---~~~~~~~~~~-~~----------~~~~v~~~~~~~-~~~l~t~~~d-~~i~iwd~~~~~~~~ 192 (343)
.+..|..+|+. +++.....-- .. .......+...+ ++..++++.. +.|...+... +
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG----~ 169 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG----K 169 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS----C
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC----C
Confidence 26779999998 6543333221 00 111478889888 8888888888 8766666533 3
Q ss_pred CeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCC
Q 019258 193 PVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQ 241 (343)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~ 241 (343)
.+..+..... ......-.+.|+++|++..+++..+ .|.+..+|++.+
T Consensus 170 ~~~~~~~~~~-~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 170 TVSTFAWESG-NGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP 216 (334)
T ss_dssp CEEEEEECCC-CSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSS
T ss_pred EEeeeeecCC-CcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC
Confidence 3333321110 0000023779999999987777666 999999999853
No 303
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.82 E-value=2.7 Score=35.53 Aligned_cols=194 Identities=12% Similarity=-0.025 Sum_probs=91.9
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcC----C-----CcEEEEEccCce
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTL----S-----GSLHVLSSAMQV 103 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~----d-----g~v~v~~~~~~~ 103 (343)
++.+++.|+.++. ..-.++.+|..... +..+..++.+-.-.++...++.+++.|+. + ..+.+||....+
T Consensus 24 ~~~i~v~GG~~~~-~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQ-SLSYLEAYNPSNGT-WLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSS-BCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCC-CcceEEEEcCCCCe-EeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 5677888886322 12246677765432 22222223222112233335666666665 2 467788876443
Q ss_pred eeeeeccCCccccCeEEEEecCCEEEEEeCC-----CcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCC-
Q 019258 104 LLSVDENSGFHVGPISGVDLTGSECVSVGED-----GRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG- 177 (343)
Q Consensus 104 ~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d- 177 (343)
-..+.... ........+.+.+..++.|+.+ ..+..||..+.+ -...........-.++....+..++.|+.+
T Consensus 102 W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 179 (308)
T 1zgk_A 102 WSPCAPMS-VPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDE-WHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG 179 (308)
T ss_dssp EEECCCCS-SCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EeECCCCC-cCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCe-EeECCCCCccccceEEEEECCEEEEEeCCCC
Confidence 22222111 1111122333346666666643 357888987763 222211111101112222245566666654
Q ss_pred ----CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC-----CcEEEEEccCC
Q 019258 178 ----YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS-----GTVFAWDLRWQ 241 (343)
Q Consensus 178 ----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d-----g~v~iwd~~~~ 241 (343)
..+..||+.. .....+......+ ....++.+ +..+++.|+.+ ..+.+||+.+.
T Consensus 180 ~~~~~~~~~yd~~~----~~W~~~~~~p~~r----~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 180 TNRLNSAECYYPER----NEWRMITAMNTIR----SGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp SCBCCCEEEEETTT----TEEEECCCCSSCC----BSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCcCceEEEEeCCC----CeEeeCCCCCCcc----ccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 4588888865 2222222111111 11223333 24577778765 45889998763
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.64 E-value=2.2 Score=37.13 Aligned_cols=75 Identities=7% Similarity=0.010 Sum_probs=46.0
Q ss_pred ceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCC---CCeEEEEEecC-----
Q 019258 159 GFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS---RKHTCLAGGSS----- 230 (343)
Q Consensus 159 ~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~---~~~~~~sg~~d----- 230 (343)
....++|.|...++.+..++.|++++ . .....+..+.... .+. .....|+++|+ +..++++-..+
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~-g~~~~~~~~~v~~--~g~--~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--E-GRLSTYAELSVYH--RGE--SGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--T-TEEEEEEECCCCC--STT--CSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--C-CCccEeecceEee--cCC--CCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 47899999944466667789999998 3 0112222221111 111 45889999997 55666665543
Q ss_pred CcEEEEEccC
Q 019258 231 GTVFAWDLRW 240 (343)
Q Consensus 231 g~v~iwd~~~ 240 (343)
..|..|+...
T Consensus 105 ~~v~r~~~~~ 114 (352)
T 2ism_A 105 NQVVRLRHLG 114 (352)
T ss_dssp EEEEEEEECS
T ss_pred cEEEEEEeCC
Confidence 6788888764
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.49 E-value=5.3 Score=37.87 Aligned_cols=156 Identities=9% Similarity=-0.024 Sum_probs=95.3
Q ss_pred CCeeEEEcc-CC-CeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceE
Q 019258 72 TRISSLSTS-HQ-SLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEF 148 (343)
Q Consensus 72 ~~v~~v~~~-~~-~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~ 148 (343)
..+.+|+|. .+ .++.+-..++.|..+++.......+... ......=.+++|. ++.+++-...+.|.+.+++... .
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~-g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~ 114 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF-GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-R 114 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-C
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC-CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-E
Confidence 467789998 44 4455556688888888763322222211 1111222344545 5555666677889999987653 2
Q ss_pred EEEEcCCCccceEEEEeCC-CCEEEEEeC--CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEE
Q 019258 149 KRVYDGNGLVGFNCVKWAS-PTEFVTGGF--GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCL 225 (343)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~-~~~l~t~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~ 225 (343)
..+.. .......+++..| ...|.-+.. .+.|...++.. .....+...- .....|++++.+..++.
T Consensus 115 ~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG----~~~~~l~~~~-------~~P~GlalD~~~~~LY~ 182 (628)
T 4a0p_A 115 QVLVW-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG----SERTTLVPNV-------GRANGLTIDYAKRRLYW 182 (628)
T ss_dssp EEEEC-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS----CSCEEEECSC-------SSEEEEEEETTTTEEEE
T ss_pred EEEEe-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC----CceEEEECCC-------CCcceEEEccccCEEEE
Confidence 33332 2222578999998 555555543 46676666643 3333333211 56889999998778888
Q ss_pred EEecCCcEEEEEccCC
Q 019258 226 AGGSSGTVFAWDLRWQ 241 (343)
Q Consensus 226 sg~~dg~v~iwd~~~~ 241 (343)
+-...+.|..+|+...
T Consensus 183 aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 183 TDLDTNLIESSNMLGL 198 (628)
T ss_dssp EETTTTEEEEEETTSC
T ss_pred EECCCCEEEEEcCCCC
Confidence 8888889999998653
No 306
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.41 E-value=3.2 Score=35.17 Aligned_cols=152 Identities=11% Similarity=0.024 Sum_probs=69.5
Q ss_pred CCCeEEEEeec--CCC--CCC--ceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCC-------CcEEEEEc
Q 019258 33 LSKLAVLAIYD--TDA--DSP--SLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLS-------GSLHVLSS 99 (343)
Q Consensus 33 ~~~~l~t~s~D--~~~--~~~--~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~d-------g~v~v~~~ 99 (343)
++.+++.|+.. ... ... .++.++..... +..+..++.+-.-.++...++.+++.|+.+ ..+.+||.
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE-WVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTE-EEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCc-EEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeC
Confidence 56778888742 111 111 15566664432 222223332222223333356677777653 24667777
Q ss_pred cCceeeeeeccCCccccCeEEEEecCCEEEEEeC------CCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEE
Q 019258 100 AMQVLLSVDENSGFHVGPISGVDLTGSECVSVGE------DGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVT 173 (343)
Q Consensus 100 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~------dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t 173 (343)
...+-..+...... ......+...+..++.|+. -..+..+|..+.+ -...........-.++....+..++.
T Consensus 135 ~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~ 212 (318)
T 2woz_A 135 VAAKWSEVKNLPIK-VYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGD-WKDLAPMKTPRSMFGVAIHKGKIVIA 212 (318)
T ss_dssp TTTEEEEECCCSSC-EESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred CCCCEeECCCCCCc-ccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCE-EEECCCCCCCcccceEEEECCEEEEE
Confidence 64432222111101 1111223334666666663 2358899998863 33322111110112222234566777
Q ss_pred EeCC-----CcEEEEEccc
Q 019258 174 GGFG-----YGLQWWDLRR 187 (343)
Q Consensus 174 ~~~d-----~~i~iwd~~~ 187 (343)
|+.+ ..+.+||+.+
T Consensus 213 GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 213 GGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEETTEEEEEEEEEETTT
T ss_pred cCcCCCCccceEEEEECCC
Confidence 7653 3466788866
No 307
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.34 E-value=3.5 Score=35.33 Aligned_cols=229 Identities=11% Similarity=0.057 Sum_probs=114.6
Q ss_pred CCCeeEEEcc-CCCeEEEEcCCCcEEEEEcc-CceeeeeeccC-CccccCeEEEEecCCEEEEEeCCCcEEEEECCCCce
Q 019258 71 PTRISSLSTS-HQSLVAASTLSGSLHVLSSA-MQVLLSVDENS-GFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGE 147 (343)
Q Consensus 71 ~~~v~~v~~~-~~~~l~~~s~dg~v~v~~~~-~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~ 147 (343)
...+.+|.|. .+..++ .+..|.| |... .++.-...... ......+.++.+..+.++.++.++.|.. ..+.++.
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTSS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCCC
Confidence 4578999998 444555 4556654 4333 22221111110 1123457788877555555666775443 3333432
Q ss_pred EEEEEcC--CCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEE
Q 019258 148 FKRVYDG--NGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCL 225 (343)
Q Consensus 148 ~~~~~~~--~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~ 225 (343)
-...... ... .+..+.+.+...++.++.++.|.. ... .++......... . ..+..+.+.|++. +++
T Consensus 111 W~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~g~v~~--S~D--gG~tW~~~~~~~--~----~~~~~~~~~~~~~-~~~ 178 (327)
T 2xbg_A 111 WSQIPLDPKLPG-SPRLIKALGNGSAEMITNVGAIYR--TKD--SGKNWQALVQEA--I----GVMRNLNRSPSGE-YVA 178 (327)
T ss_dssp CEECCCCTTCSS-CEEEEEEEETTEEEEEETTCCEEE--ESS--TTSSEEEEECSC--C----CCEEEEEECTTSC-EEE
T ss_pred ceECccccCCCC-CeEEEEEECCCCEEEEeCCccEEE--EcC--CCCCCEEeecCC--C----cceEEEEEcCCCc-EEE
Confidence 2222111 111 366776655455555666665432 211 244444433211 1 4588999999764 444
Q ss_pred EEecCCcEEE-EEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC-C
Q 019258 226 AGGSSGTVFA-WDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG-E 303 (343)
Q Consensus 226 sg~~dg~v~i-wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~-~ 303 (343)
. +.+|.+.. +|-. +..-..+. ......+..+.+.+++. ++.++.+|.++....+ .
T Consensus 179 ~-g~~G~~~~S~d~g-G~tW~~~~----------~~~~~~~~~~~~~~~g~-----------~~~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 179 V-SSRGSFYSTWEPG-QTAWEPHN----------RTTSRRLHNMGFTPDGR-----------LWMIVNGGKIAFSDPDNS 235 (327)
T ss_dssp E-ETTSSEEEEECTT-CSSCEEEE----------CCSSSCEEEEEECTTSC-----------EEEEETTTEEEEEETTEE
T ss_pred E-ECCCcEEEEeCCC-CCceeECC----------CCCCCccceeEECCCCC-----------EEEEeCCceEEEecCCCC
Confidence 4 45555544 3321 11111111 22345788888887654 5677778888776322 1
Q ss_pred Ccccccc-----cccccceeeecCCCCCeeEEccCCceEEEE
Q 019258 304 EPFELLA-----EPCAINSFDIDPQNPSDVICSLEWESIAIV 340 (343)
Q Consensus 304 ~~~~~~~-----~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~ 340 (343)
...+... ....+.++.+.+ ++..+++|. ++.++..
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i~~S 275 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGALLCS 275 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TTCEEEE
T ss_pred CeeEeccCCcccCCcceEEEEecC-CCEEEEEeC-CCeEEEe
Confidence 1111111 123467787776 345555554 5666543
No 308
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.16 E-value=5.1 Score=36.71 Aligned_cols=156 Identities=11% Similarity=0.024 Sum_probs=86.8
Q ss_pred eeEEEcc--CCCeEEEEc-CCCcEEEEEccCceeeeeeccCCccccCeEEEEe-------c--CCEEEEEeCCC-c----
Q 019258 74 ISSLSTS--HQSLVAAST-LSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDL-------T--GSECVSVGEDG-R---- 136 (343)
Q Consensus 74 v~~v~~~--~~~~l~~~s-~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~--~~~~~s~s~dg-~---- 136 (343)
...|+|. +.+.|+++. ..+.|++.|........+.............++| + ++.++.+...+ .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 4566666 234444444 3456777777654433333221112335788999 6 66565555443 2
Q ss_pred --EEEEECCC-CceE----EEEEcCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEcc-------ccCCCCC-------
Q 019258 137 --VNLVSVIG-GGEF----KRVYDGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLR-------RAGSGGP------- 193 (343)
Q Consensus 137 --v~~wd~~~-~~~~----~~~~~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~-------~~~~~~~------- 193 (343)
|.+.+-.. +... ...+.... ....++.+| ..++++-..++.|..+|+. . +..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~--~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~t---g~~~tp~~~~ 295 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYK--QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKN---GGSWDPIVKN 295 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEES--CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHT---TCCCCCBGGG
T ss_pred ceEEEEecCCCCceeecccceeeccCC--CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccC---ceeecccccc
Confidence 55665333 1110 01111111 345667788 4455556668889999997 3 221
Q ss_pred ----eeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEcc
Q 019258 194 ----VLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLR 239 (343)
Q Consensus 194 ----~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~ 239 (343)
...+.... .. ..-..|+++|++..++++-+..+.|+.+|..
T Consensus 296 ~~g~~~~l~~~~-~~----~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 296 NPNTFKQLFTIA-DP----SWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CTTTEEEEEECS-SS----SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccccceeEecC-CC----CCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 12222111 01 4467999999998677777888899997754
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.84 E-value=3.8 Score=34.37 Aligned_cols=193 Identities=11% Similarity=0.048 Sum_probs=91.8
Q ss_pred CCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCC-----CcEEEEEccCceeeeee
Q 019258 34 SKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLS-----GSLHVLSSAMQVLLSVD 108 (343)
Q Consensus 34 ~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~d-----g~v~v~~~~~~~~~~~~ 108 (343)
+.+++.|+.+.. ..-.++.++..... +..+..++.+-.-.++...++.+++.|+.+ ..+.+||....+-..+.
T Consensus 16 ~~i~v~GG~~~~-~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPK-AIRSVECYDFKEER-WHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSS-BCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCC-CCCcEEEEcCcCCc-EeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 467777876543 11235677775432 222222222211122222356667776644 35778887644322222
Q ss_pred ccCCccccCeEEEEecCCEEEEEeCCC-----cEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCC------
Q 019258 109 ENSGFHVGPISGVDLTGSECVSVGEDG-----RVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFG------ 177 (343)
Q Consensus 109 ~~~~~h~~~v~~~~~~~~~~~s~s~dg-----~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d------ 177 (343)
... ........+.+.+..++.|+.++ .+.+||+.+.+ -...........-.++....+..++.|+.+
T Consensus 94 ~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 94 NMR-DRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNE-WFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CCS-SCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEE
T ss_pred CCC-ccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCe-EeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcc
Confidence 111 11112223334477777777553 46778887763 333221111101122222335556666542
Q ss_pred -CcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC-----cEEEEEccCC
Q 019258 178 -YGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG-----TVFAWDLRWQ 241 (343)
Q Consensus 178 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg-----~v~iwd~~~~ 241 (343)
..+..||+.. .....+......+ .....+.+ +..+++.|+.++ .+.+||+.+.
T Consensus 172 ~~~~~~yd~~~----~~W~~~~~~p~~r----~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 172 LSTVECYNATT----NEWTYIAEMSTRR----SGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp CCCEEEEETTT----TEEEEECCCSSCC----BSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred ccEEEEEeCCC----CcEEECCCCcccc----ccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 4578888865 2233332111111 11222333 236777787653 6889998763
No 310
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.58 E-value=4.3 Score=34.34 Aligned_cols=152 Identities=9% Similarity=-0.043 Sum_probs=72.2
Q ss_pred CCCeEEEEeec----CCCCCC--ceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCC--------CcEEEEE
Q 019258 33 LSKLAVLAIYD----TDADSP--SLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLS--------GSLHVLS 98 (343)
Q Consensus 33 ~~~~l~t~s~D----~~~~~~--~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~d--------g~v~v~~ 98 (343)
++.+++.|+.+ ...... .++.++..... +..+..++.+-.-.++...++.+++.|+.+ ..+.+||
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d 123 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE-WLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYD 123 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE-EEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCe-EEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEEC
Confidence 56788888862 111111 14566664432 222333332211122222356666666632 4578888
Q ss_pred ccCceeeeeeccCCccccCeEEEEecCCEEEEEeC-C-----CcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEE
Q 019258 99 SAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGE-D-----GRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFV 172 (343)
Q Consensus 99 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~-d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 172 (343)
....+-..+.... ........+...+..++.|+. + ..+..+|..+.+ -..+........-.++....+..++
T Consensus 124 ~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv 201 (315)
T 4asc_A 124 RLSFKWGESDPLP-YVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE-WKELAPMQTARSLFGATVHDGRIIV 201 (315)
T ss_dssp TTTTEEEECCCCS-SCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEE
T ss_pred CCCCcEeECCCCC-CcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCe-EEECCCCCCchhceEEEEECCEEEE
Confidence 8754322222111 111122233344666777765 2 468889988763 2222111111011222223456777
Q ss_pred EEeCCC-----cEEEEEccc
Q 019258 173 TGGFGY-----GLQWWDLRR 187 (343)
Q Consensus 173 t~~~d~-----~i~iwd~~~ 187 (343)
.|+.++ .+.+||+.+
T Consensus 202 ~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 202 AAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EEEECSSSEEEEEEEEETTT
T ss_pred EeccCCCCccceEEEEECCC
Confidence 777654 477888866
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.55 E-value=5.6 Score=35.61 Aligned_cols=151 Identities=11% Similarity=0.046 Sum_probs=84.7
Q ss_pred CCCeEEEEcCCCcEEEEEccCceeeeeeccCC-ccccCeEEEEec--CCEEEEEeCCCcEEEEECCCCc-----------
Q 019258 81 HQSLVAASTLSGSLHVLSSAMQVLLSVDENSG-FHVGPISGVDLT--GSECVSVGEDGRVNLVSVIGGG----------- 146 (343)
Q Consensus 81 ~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~-~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~----------- 146 (343)
++..++.+ .++.||.-++............. .-...|..+..+ |..++.. .+..|.+-.+..+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCcccccccc
Confidence 44444444 34677777776332233332211 112356778887 5555555 55578888886321
Q ss_pred -eEEEEEcCC----CccceEEEEeCC----CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCC--CCCcccCeEEEE
Q 019258 147 -EFKRVYDGN----GLVGFNCVKWAS----PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGS--QGKASGMIHSVD 215 (343)
Q Consensus 147 -~~~~~~~~~----~~~~v~~~~~~~----~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~v~ 215 (343)
++....-+. ....|..+.||| +..|++-..|++|++||+.. +..+|. .+...... .......|.+++
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~-s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN-SQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC-TTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc-CCCCCc-chhccccccCCCcccceEEEEE
Confidence 111111111 123699999999 56899999999999999986 123333 33211100 000115688999
Q ss_pred EcCCCCeEEEE--EecCCcEEEE
Q 019258 216 IHPSRKHTCLA--GGSSGTVFAW 236 (343)
Q Consensus 216 ~~p~~~~~~~s--g~~dg~v~iw 236 (343)
|.+.+-. +.. .+++|.|+-.
T Consensus 187 Fg~~~lT-LYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLT-LYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSC-EEEEECTTSCEEEEE
T ss_pred EcCCCcE-EEEEecCCCCCEEEE
Confidence 9986533 334 3478888754
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.52 E-value=5 Score=34.99 Aligned_cols=146 Identities=12% Similarity=-0.024 Sum_probs=76.3
Q ss_pred CCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcC--CCC-eEEEEEec--CCcEEEEEccCCceeeeeecC
Q 019258 176 FGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHP--SRK-HTCLAGGS--SGTVFAWDLRWQQQSIVLSGV 250 (343)
Q Consensus 176 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p--~~~-~~~~sg~~--dg~v~iwd~~~~~~~~~~~~~ 250 (343)
.+|.|.++|+.. +......+......-....-..+.+++.+ ++. .++++-.. +.+|.+|++........+...
T Consensus 81 ~~G~I~~~d~~~--~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~ 158 (355)
T 3sre_A 81 KSGKILLMDLNE--KEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKT 158 (355)
T ss_dssp -CCEEEEEETTS--SSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEE
T ss_pred CCCeEEEEecCC--CCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEec
Confidence 699999999875 22233333211100000113467777765 343 45555443 567888887653332222210
Q ss_pred CCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEe-----------------cCCeEEEEecCCCccccccccc
Q 019258 251 GTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCS-----------------EDGILAVVEQGEEPFELLAEPC 313 (343)
Q Consensus 251 ~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s-----------------~dg~i~~~~~~~~~~~~~~~~~ 313 (343)
. ...--...+++.+.+++. +.++.. ..|.|+.++.+ +...+...-.
T Consensus 159 ~------~g~~~~~pND~~v~~~G~----------fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-~~~~~~~~l~ 221 (355)
T 3sre_A 159 I------RHKLLPSVNDIVAVGPEH----------FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-DVRVVAEGFD 221 (355)
T ss_dssp E------CCTTCSSEEEEEEEETTE----------EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-CCEEEEEEES
T ss_pred c------ccCCCCCCceEEEeCCCC----------EEecCCcEeCCcccccchhhccCCccEEEEEECC-eEEEeecCCc
Confidence 0 011124578999999876 233322 23567777764 2323333334
Q ss_pred ccceeeecCCCCCee-EEccCCceEEEEe
Q 019258 314 AINSFDIDPQNPSDV-ICSLEWESIAIVS 341 (343)
Q Consensus 314 ~i~s~~~~~~~~~~l-~~~~~~~~i~~~~ 341 (343)
.-|.++++|+ ++.| ++-+..+.|+.|.
T Consensus 222 ~pNGia~spD-g~~lYvadt~~~~I~~~~ 249 (355)
T 3sre_A 222 FANGINISPD-GKYVYIAELLAHKIHVYE 249 (355)
T ss_dssp SEEEEEECTT-SSEEEEEEGGGTEEEEEE
T ss_pred ccCcceECCC-CCEEEEEeCCCCeEEEEE
Confidence 5699999994 4444 4444556787764
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.36 E-value=11 Score=38.57 Aligned_cols=247 Identities=12% Similarity=-0.003 Sum_probs=121.3
Q ss_pred cceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEcc----CCCeEEEEcCCCcE
Q 019258 19 KYIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTS----HQSLVAASTLSGSL 94 (343)
Q Consensus 19 ~~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~----~~~~l~~~s~dg~v 94 (343)
.+|..++-..........+++++.-+..+ +|++..-.-.........++....++.+... ...+|+.+..+.+
T Consensus 375 ~PI~D~~v~d~~~~~~~~i~~~sG~g~~g--sL~~lr~Gi~~~~~~~~~l~gv~~iWtl~~~~~~~~~~yLvlS~~~~T- 451 (1158)
T 3ei3_A 375 GPIVDMCVVDLERQGQGQLVTCSGAFKEG--SLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQT- 451 (1158)
T ss_dssp CSEEEEEEECTTSSSCCEEEEEECCGGGC--EEEEEEESBCEEEEEEECCCSCCEEEEECCCSSCSSCCEEEEEETTEE-
T ss_pred CCceeEEEEccCCCCCCeEEEEECcCCCC--eEEEEecCCCEEEEEeecCCCccEEEEEeecCCCCCCCEEEEECCCCe-
Confidence 34555544432212334566555444334 4656554222111111123333456666543 3456776666665
Q ss_pred EEEEccCc--eeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEE
Q 019258 95 HVLSSAMQ--VLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFV 172 (343)
Q Consensus 95 ~v~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 172 (343)
+|+.+... +++....+. .-...+.+-...++.++=....+ |++.+...... ...+.......|...+.+.. .++
T Consensus 452 ~Vl~i~~e~veev~~~gf~-~~~~TL~~~~l~~~~ivQVt~~~-Irli~~~~~~~-~~~w~~p~~~~I~~As~n~~-~vv 527 (1158)
T 3ei3_A 452 RVLMLNGEEVEETELMGFV-DDQQTFFCGNVAHQQLIQITSAS-VRLVSQEPKAL-VSEWKEPQAKNISVASCNSS-QVV 527 (1158)
T ss_dssp EEEEEETTEEEEECCTTCC-SSSCEEEEEEETTTEEEEEESSC-EEEEESSSCCE-EEEECCTTCCCCCEEEECSS-EEE
T ss_pred EEEEEeCCccccccccccc-CCCCcEEEEEcCCCeEEEEecCE-EEEEECCCCeE-EEEEECCCCCEEEEEEeCCC-EEE
Confidence 67776422 222111110 01111222222244444444444 77777765433 33333333225777776654 455
Q ss_pred EEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCC-----CeEEEEEec-CCcEEEEEccCCceeee
Q 019258 173 TGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSR-----KHTCLAGGS-SGTVFAWDLRWQQQSIV 246 (343)
Q Consensus 173 t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~-----~~~~~sg~~-dg~v~iwd~~~~~~~~~ 246 (343)
.+. ++.+.++++.. ++ +....... -...|.|+++.|.. ..+++.|.. |++|+++++...+ +..
T Consensus 528 va~-g~~l~~fel~~---~~-L~~~~~~~-----l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~-~~~ 596 (1158)
T 3ei3_A 528 VAV-GRALYYLQIHP---QE-LRQISHTE-----MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE-LLH 596 (1158)
T ss_dssp EEE-TTEEEEEEEET---TE-EEEEEEEE-----CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC-EEE
T ss_pred EEE-CCEEEEEEeeC---Cc-eeeecccC-----CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC-eEE
Confidence 554 67888888765 22 22221111 01569999998643 256788886 9999999997643 333
Q ss_pred eecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEe
Q 019258 247 LSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVE 300 (343)
Q Consensus 247 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~ 300 (343)
..... -+....+|.+..-+.. ++|..+-.||.+..+.
T Consensus 597 ~~~L~---------~~~~p~si~l~~~~~~--------~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 597 KEMLG---------GEIIPRSILMTTFESS--------HYLLCALGDGALFYFG 633 (1158)
T ss_dssp EEECC---------SSCCEEEEEEEEETTE--------EEEEEEETTSEEEEEE
T ss_pred EEECC---------CCCCCcEEEEEEeCCC--------cEEEEEeCCCeEEEEE
Confidence 22111 1123334444322110 2788888999876543
No 314
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.08 E-value=5.6 Score=34.57 Aligned_cols=74 Identities=14% Similarity=0.040 Sum_probs=46.0
Q ss_pred ceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCC-CeeEEecccCCCCCcccCeEEEEEcCC---CCeEEEEEec---C-
Q 019258 159 GFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGG-PVLQFKGNFGSQGKASGMIHSVDIHPS---RKHTCLAGGS---S- 230 (343)
Q Consensus 159 ~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~v~~~p~---~~~~~~sg~~---d- 230 (343)
....++|.+...++.+..++.|+++|. . +. .+..+.... .+. .....|+++|+ +..++++-+. +
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~-~---G~~~~~~~~v~~--~g~--~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISP-S---GKKLVASFDVAN--VGE--AGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECS-S---CEEEEEECCCCC--STT--CSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeC-C---CceEeeccceee--cCC--CceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 478899998556777777899999873 3 22 222221101 111 45889999997 4566665442 3
Q ss_pred ---CcEEEEEccC
Q 019258 231 ---GTVFAWDLRW 240 (343)
Q Consensus 231 ---g~v~iwd~~~ 240 (343)
..|..|+...
T Consensus 102 ~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 102 HIRNRVIRGRLDG 114 (354)
T ss_dssp CEEEEEEEEEECS
T ss_pred CcceEEEEEEECC
Confidence 5688887654
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.50 E-value=6.6 Score=34.22 Aligned_cols=154 Identities=13% Similarity=0.100 Sum_probs=84.5
Q ss_pred eeEEEccCCCeEEEEc-------------CCCcEEEEEccCc--e--eeeeecc-CCccccCeEEEEec----CC-EEEE
Q 019258 74 ISSLSTSHQSLVAAST-------------LSGSLHVLSSAMQ--V--LLSVDEN-SGFHVGPISGVDLT----GS-ECVS 130 (343)
Q Consensus 74 v~~v~~~~~~~l~~~s-------------~dg~v~v~~~~~~--~--~~~~~~~-~~~h~~~v~~~~~~----~~-~~~s 130 (343)
..++......++++++ .+|.|.++|..+. + .+.+... .......-..+++. +. .++.
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4455545445566665 6899999998622 1 2222211 11122345666653 22 3433
Q ss_pred E-eC--CCcEEEEECCCCc---eEEEEEcCCCccceEEEEeCCCCEEEEEeC------------------CCcEEEEEcc
Q 019258 131 V-GE--DGRVNLVSVIGGG---EFKRVYDGNGLVGFNCVKWASPTEFVTGGF------------------GYGLQWWDLR 186 (343)
Q Consensus 131 ~-s~--dg~v~~wd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~------------------d~~i~iwd~~ 186 (343)
+ .. +.++-+|+++... .....+.+.......++...+...|..++. .+.|..+|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 3 22 5677888775421 122333333334578888888444444432 133444433
Q ss_pred ccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccC
Q 019258 187 RAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240 (343)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~ 240 (343)
++ +..+...- ..-+.++|+|++..++++-+..++|..||+..
T Consensus 211 ----~~-~~~~~~~l-------~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 211 ----ND-VRVVAEGF-------DFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp ----TC-CEEEEEEE-------SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ----Ce-EEEeecCC-------cccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 21 22221111 45789999999988888888889999999864
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.28 E-value=5.9 Score=33.22 Aligned_cols=191 Identities=9% Similarity=-0.065 Sum_probs=92.4
Q ss_pred CCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCC----CcEEEEEccCceeeeeec
Q 019258 34 SKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLS----GSLHVLSSAMQVLLSVDE 109 (343)
Q Consensus 34 ~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~d----g~v~v~~~~~~~~~~~~~ 109 (343)
+.+++.|+.+.. -.++.+|..... +..+..++.+-.-.++...++.+++.|+.+ ..+.+||....+-..+..
T Consensus 12 ~~l~~~GG~~~~---~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQP---QSCRYFNPKDYS-WTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSST---TSEEEEETTTTE-EEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCC---ceEEEecCCCCC-EecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 456777876541 246677775432 222222332221122222356667777654 567888877543222222
Q ss_pred cCCccccCeEEEEecCCEEEEEeCC------CcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeC-------
Q 019258 110 NSGFHVGPISGVDLTGSECVSVGED------GRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGF------- 176 (343)
Q Consensus 110 ~~~~h~~~v~~~~~~~~~~~s~s~d------g~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~------- 176 (343)
.. ........+.+.+..++.|+.+ ..+.+||..+.+ -...-.......-.++....+..++.|+.
T Consensus 88 ~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 88 PP-TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES-WHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp CS-SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTC
T ss_pred CC-ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc-eEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcc
Confidence 11 1111122333346667777755 458889988763 33322111110111222223455666654
Q ss_pred --CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecC-----CcEEEEEccCC
Q 019258 177 --GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSS-----GTVFAWDLRWQ 241 (343)
Q Consensus 177 --d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~d-----g~v~iwd~~~~ 241 (343)
-..+.+||+.+ .....+......+ .....+.+ +..+++.|+.+ ..+.+||+.+.
T Consensus 166 ~~~~~~~~yd~~~----~~W~~~~~~p~~r----~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 166 RVLNSCEVYDPAT----ETWTELCPMIEAR----KNHGLVFV---KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp EECCCEEEEETTT----TEEEEECCCSSCC----BSCEEEEE---TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred cccceEEEeCCCC----CeEEECCCccchh----hcceEEEE---CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 34588888866 2333332211111 11222333 23577777754 35888998763
No 317
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.15 E-value=6.8 Score=33.69 Aligned_cols=98 Identities=7% Similarity=0.019 Sum_probs=49.0
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCC-CCCCCCCccCC-CCCCeeEEEccCCCeEEEEcC-C---------CcEEEEEcc
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISL-PASLTPHSQWT-PPTRISSLSTSHQSLVAASTL-S---------GSLHVLSSA 100 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~-~~~~~~~~~~~-~~~~v~~v~~~~~~~l~~~s~-d---------g~v~v~~~~ 100 (343)
++.+++.|+.+.. .++.++... ...+..+..++ .+-.-.++...++.+++.|+. + ..+.+||..
T Consensus 19 ~~~iyv~GG~~~~----~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGT----AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGGGTT----CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCC----eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 4677888887643 467777743 23343344444 222222333335666666665 2 467888887
Q ss_pred CceeeeeeccCCccccCeEEEEecCCEEEEEeCC
Q 019258 101 MQVLLSVDENSGFHVGPISGVDLTGSECVSVGED 134 (343)
Q Consensus 101 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~d 134 (343)
..+-..+......-.....++...+..++.|+.+
T Consensus 95 ~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 95 TNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred CCcEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 5432222211101111223333447777888765
No 318
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.74 E-value=11 Score=35.53 Aligned_cols=156 Identities=6% Similarity=-0.089 Sum_probs=91.7
Q ss_pred CCeeEEEcc--CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceE
Q 019258 72 TRISSLSTS--HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEF 148 (343)
Q Consensus 72 ~~v~~v~~~--~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~ 148 (343)
..+.+++|. ++.++++-...+.|+.++........+... ......-.+++|. ++.+++-+..+.|.+.+++... .
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~-~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~ 426 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA-QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-R 426 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC-CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-E
Confidence 457788887 344455555678888888763222222211 0111122344444 5566666678899999987652 2
Q ss_pred EEEEcCCCccceEEEEeCC-CCEEEEEeC--CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEE
Q 019258 149 KRVYDGNGLVGFNCVKWAS-PTEFVTGGF--GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCL 225 (343)
Q Consensus 149 ~~~~~~~~~~~v~~~~~~~-~~~l~t~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~ 225 (343)
..+.. .......++++.| ...+.-+.. ...|...++.. .....+.... . ...+.|++++....++.
T Consensus 427 ~~l~~-~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG----~~~~~l~~~~----l--~~P~GlalD~~~~~LY~ 495 (619)
T 3s94_A 427 KILIS-EDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDG----SDRVVLVNTS----L--GWPNGLALDYDEGKIYW 495 (619)
T ss_dssp EEEEC-TTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTS----CSCEEEECSS----C--SCEEEEEEETTTTEEEE
T ss_pred EEEEE-CCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCC----CccEEEEeCC----C--CCCeeeEEcccCCEEEE
Confidence 33332 2223588999998 455554443 35555555532 3223332111 1 56889999987778888
Q ss_pred EEecCCcEEEEEccC
Q 019258 226 AGGSSGTVFAWDLRW 240 (343)
Q Consensus 226 sg~~dg~v~iwd~~~ 240 (343)
+-+..+.|..+|+..
T Consensus 496 aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 496 GDAKTDKIEVMNTDG 510 (619)
T ss_dssp EETTTTEEEEEESSS
T ss_pred EECCCCEEEEEecCC
Confidence 777788899999854
No 319
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.10 E-value=13 Score=35.15 Aligned_cols=191 Identities=11% Similarity=-0.048 Sum_probs=106.6
Q ss_pred cCeEEEEec--CCE-EEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC--CCEEEEEeCCCcEEEEEccccCC
Q 019258 116 GPISGVDLT--GSE-CVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGS 190 (343)
Q Consensus 116 ~~v~~~~~~--~~~-~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~ 190 (343)
..+.+++++ ++. +++-...+.|..++.+... ...+.... ......+++.+ .+.+++-+..+.|.+.++..
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~-~~~v~~~~-~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G--- 423 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSG-SQFVVTAQ-IAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG--- 423 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTS---
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCc-cEEEEECC-CCCcCceEEecccCcEEEEeCCCCcEEEEeCCC---
Confidence 356788887 444 4455567888888887642 33333222 11466777765 55566666688999988855
Q ss_pred CCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEec-CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEE
Q 019258 191 GGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS-SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQ 269 (343)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 269 (343)
.....+.... . .....|+++|....++.+-.. .+.|...++.. .....+. ...-..-..|+
T Consensus 424 -~~~~~l~~~~----l--~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG-~~~~~l~----------~~~l~~P~Gla 485 (619)
T 3s94_A 424 -TMRKILISED----L--EEPRAIVLDPMVGYMYWTDWGEIPKIERAALDG-SDRVVLV----------NTSLGWPNGLA 485 (619)
T ss_dssp -CSCEEEECTT----C--CSEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEE----------CSSCSCEEEEE
T ss_pred -CeEEEEEECC----C--CCeeeEEEEcCCCcEEEecCCCCCEEEEEccCC-CccEEEE----------eCCCCCCeeeE
Confidence 2223333111 1 458899999976667766533 46777777753 2222222 11234567899
Q ss_pred EeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-ccccccc-ccccceeeecCCCCCeeEEc-cCCceEEEEe
Q 019258 270 YDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFELLAE-PCAINSFDIDPQNPSDVICS-LEWESIAIVS 341 (343)
Q Consensus 270 ~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~~~~-~~~i~s~~~~~~~~~~l~~~-~~~~~i~~~~ 341 (343)
+++.... ..++=+..++|...+.... ...+... .....++++.. .+|..+ ...+.|+..+
T Consensus 486 lD~~~~~---------LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~---~~ly~tD~~~~~I~~~~ 548 (619)
T 3s94_A 486 LDYDEGK---------IYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLG---DYVYWTDWQRRSIERVH 548 (619)
T ss_dssp EETTTTE---------EEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEET---TEEEEECTTSSCEEEEE
T ss_pred EcccCCE---------EEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEEC---CEEEEeecCCCeEEEEE
Confidence 9987663 3334455577888776433 2222222 12234566664 233333 2334555444
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=87.99 E-value=2.7 Score=33.97 Aligned_cols=112 Identities=4% Similarity=-0.075 Sum_probs=62.3
Q ss_pred cCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceE
Q 019258 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAM 288 (343)
Q Consensus 209 ~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~ 288 (343)
..+..++|+|++. +.++ .+|.++-.+..+... ....+.... .-..+. ..-..+.|+|++. |+
T Consensus 41 ~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~-~~W~~s~t~--IG~~Gw-~~F~a~~fD~~G~-----------LY 102 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDN-DNWMGRAKK--IGNGGW-NQFQFLFFDPNGY-----------LY 102 (236)
T ss_dssp TTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTT-CCHHHHCEE--EECSCG-GGCSEEEECTTSC-----------EE
T ss_pred ccceeEEECCCcc-EEEE--eCCeEEEECCCCCCc-ccccccccE--eccccc-ccceEEEECCCCC-----------EE
Confidence 3478999999775 5555 778777766543111 111100000 000011 1146888998875 45
Q ss_pred EEecCCeEEEEecC--CCcccccccc-------cccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 289 FCSEDGILAVVEQG--EEPFELLAEP-------CAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 289 s~s~dg~i~~~~~~--~~~~~~~~~~-------~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
.. .||.|+-++.. ....++.... ..+..+.+.|+ ..|-+.. ++.++-...
T Consensus 103 av-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~--G~Lyav~-dg~lyr~~~ 161 (236)
T 1tl2_A 103 AV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPN--GYLYAVH-GQQFYKALP 161 (236)
T ss_dssp EE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTT--SCEEEEE-TTEEEEECC
T ss_pred Ee-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCC--ceEEEEe-CCcEEecCC
Confidence 55 67999988863 3334444321 35788888884 4555555 667665443
No 321
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=87.05 E-value=14 Score=31.90 Aligned_cols=77 Identities=16% Similarity=0.212 Sum_probs=43.2
Q ss_pred ceEEEEeCCCCE-EEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCC---CCeEEEEEec-----
Q 019258 159 GFNCVKWASPTE-FVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPS---RKHTCLAGGS----- 229 (343)
Q Consensus 159 ~v~~~~~~~~~~-l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~---~~~~~~sg~~----- 229 (343)
....++|.|... ++.+...+.|++++... ....++..+..... .+. +....++++|+ +..++++-+.
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~-~g~--~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWA-HGQ--GGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCC-STT--CSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCccccc-CCC--CCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 478899999444 66667789999988422 00111211110000 000 34789999996 4566665443
Q ss_pred --CCcEEEEEcc
Q 019258 230 --SGTVFAWDLR 239 (343)
Q Consensus 230 --dg~v~iwd~~ 239 (343)
...|..|++.
T Consensus 95 ~~~~~v~r~~~~ 106 (353)
T 2g8s_A 95 KAGTAVGYGRLS 106 (353)
T ss_dssp CEEEEEEEEEEC
T ss_pred CceeEEEEEEEC
Confidence 2357777664
No 322
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=86.86 E-value=14 Score=31.80 Aligned_cols=230 Identities=14% Similarity=0.067 Sum_probs=129.8
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEEEEEccC-ceeeeeeccC
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAM-QVLLSVDENS 111 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~-~~~~~~~~~~ 111 (343)
..+.+|.=. +. .|++++++.+ ..+++...+.+|.=.+|.+.+.|+..+. ..|+-|++.. ..+..+....
T Consensus 77 ~~~ViALra--g~----~LQiFnletK---~klks~~~~e~VvfWkWis~~~L~lVT~-taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 77 ASKVIALKA--GK----TLQIFNIEMK---SKMKAHTMTDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp SSSEEEEEE--TT----EEEEEETTTT---EEEEEEECSSCEEEEEECSSSEEEEEES-SEEEEEESSTTCCCEEEEECC
T ss_pred CccEEEEec--CC----eEEEechHHh---hhhcceecCCccEEEEecCCCeEEEEcC-CcEEEEcccCCCCCceeeecc
Confidence 455666543 21 4889999653 3355666677899999986676666554 4799999873 3333333221
Q ss_pred -CccccCeEEEEec--CCEEEEEe-------CCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC----CCEEEEEeC-
Q 019258 112 -GFHVGPISGVDLT--GSECVSVG-------EDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS----PTEFVTGGF- 176 (343)
Q Consensus 112 -~~h~~~v~~~~~~--~~~~~s~s-------~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~l~t~~~- 176 (343)
..-...|.....+ .++++..| -.|.+.+|..+.+ ..+.+++|.. ....+.... ...|..+..
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ieGhaa-~F~~~~~~g~~~~~~lf~fa~r~ 223 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAA-SFAQFKMEGNAEESTLFCFAVRG 223 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT--EEEEECCSEE-EEEEECCTTCSSCEEEEEEEEEE
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc--ccceeeeeee-eeEEEecCCCCCCceEEEEEEec
Confidence 1112345555555 55555443 2367789998876 4566677754 333333322 222333332
Q ss_pred --CCcEEEEEccccCCCCCee-----EE-ecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeee
Q 019258 177 --GYGLQWWDLRRAGSGGPVL-----QF-KGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248 (343)
Q Consensus 177 --d~~i~iwd~~~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~ 248 (343)
.+++++-++.....+.+.. .+ ...+. ..+.--++..++.- .++..-+.-|.+.+||+.++.......
T Consensus 224 ~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea----~~DFPVamqvs~ky-gviyviTK~G~ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 224 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA----QNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCIYMNR 298 (365)
T ss_dssp TTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTC----TTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCcEEEEEEcCCCCCCCCCcccccceeeCCccc----cCCceEEEEecccC-CEEEEEeCCcEEEEEEcccCcEEEEec
Confidence 2689999885410022221 11 11111 11455677777764 455566889999999999976554433
Q ss_pred cCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEec
Q 019258 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 249 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~ 301 (343)
.....|..-+.+.... -++.....|.+....-
T Consensus 299 -----------IS~d~iF~ta~~~~~~----------Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 299 -----------ISGETIFVTAPHEATA----------GIIGVNRKGQVLSVCV 330 (365)
T ss_dssp -----------CCSSCEEEEEEEGGGT----------EEEEEETTCEEEEEEE
T ss_pred -----------cCCCceEEecccCCCC----------cEEEEcCCCEEEEEEE
Confidence 2345665555544433 3566667777665443
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=85.78 E-value=16 Score=31.27 Aligned_cols=58 Identities=3% Similarity=-0.163 Sum_probs=26.7
Q ss_pred CCCeEEEEee-c---C-CCCCCceeeeeCCCCCCCCCCccCC-CCCCeeEEEccCCCeEEEEcCC
Q 019258 33 LSKLAVLAIY-D---T-DADSPSLETHSISLPASLTPHSQWT-PPTRISSLSTSHQSLVAASTLS 91 (343)
Q Consensus 33 ~~~~l~t~s~-D---~-~~~~~~l~~w~~~~~~~~~~~~~~~-~~~~v~~v~~~~~~~l~~~s~d 91 (343)
++.+++.|+. + . ....-.++.+|..... +..+..+. .+-.-.++...++.+++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS-WVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTE-EEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCc-EEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 4567777876 3 1 1111246677775433 22222222 1111111222356777777754
No 324
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=85.07 E-value=23 Score=34.53 Aligned_cols=167 Identities=7% Similarity=-0.020 Sum_probs=78.8
Q ss_pred ceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCc----
Q 019258 159 GFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGT---- 232 (343)
Q Consensus 159 ~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~---- 232 (343)
.|.++.++| .+.+.+++..+.|...+= .++....+.............+.+|+++|..+..+..+..+..
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~D----gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDA----GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEET----TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecC----CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 699999998 567777887776654432 2333333221110000011459999999865544444443211
Q ss_pred EEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEE-------EecCCCc
Q 019258 233 VFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAV-------VEQGEEP 305 (343)
Q Consensus 233 v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~-------~~~~~~~ 305 (343)
-.||--.....-............. ......+..|+++|.++. .++.+...+.|+. |..-...
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~-~~~~~~~~~iav~p~~~~---------~v~~g~~~~gl~~S~DgG~TW~~~~~~ 161 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGAN-DMGRNNGERLAVNPFNSN---------EVWMGTRTEGIWKSSDRAKTWTNVTSI 161 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTT-STTTTSCCCEEEETTEEE---------EEEEECSSSCEEEESSTTSSCEEETTS
T ss_pred cEEEEECCCCCcceeccCCcccCcc-CCCccceeEEEEcCCCCC---------EEEEEeccCCEEEECCCCcccCCCccC
Confidence 2334322222222222110000000 000113556888876654 5566654555543 2211110
Q ss_pred ccccccccccceeeecCCCCCeeEEccCC-ceEEE
Q 019258 306 FELLAEPCAINSFDIDPQNPSDVICSLEW-ESIAI 339 (343)
Q Consensus 306 ~~~~~~~~~i~s~~~~~~~~~~l~~~~~~-~~i~~ 339 (343)
..+......+..+.++|.++..|.++..+ ..|+.
T Consensus 162 ~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 162 PDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp CCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE
T ss_pred ccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE
Confidence 00001123467888888666666666544 55554
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=83.89 E-value=24 Score=31.77 Aligned_cols=230 Identities=15% Similarity=0.087 Sum_probs=130.4
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEEEEEccC-ceeeeeecc-
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAM-QVLLSVDEN- 110 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~-~~~~~~~~~- 110 (343)
..+.+|.=. +. .|++++++.+ ..+++...+.+|.-.+|.+++.|+..+ +..|+-|++.. ..+..+...
T Consensus 76 ~~~iiALra--g~----~lQiFnle~K---~klks~~~~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 76 ASKVIALKA--GK----TLQIFNIEMK---SKMKAHTMTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp SSSCEEEEE--TT----EEEEEETTTT---EEEEEEECSSCCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEECC
T ss_pred CCcEEEEec--CC----eEEEEchHHh---hhhcceecCCCceEEEecCCCeEEEEc-CCeeEEecccCCCCchhheecc
Confidence 445565543 21 4889999653 335566667788888898666666554 44799999973 333333321
Q ss_pred CCccccCeEEEEec--CCEEEEEe-------CCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC----CCEEEEEeC-
Q 019258 111 SGFHVGPISGVDLT--GSECVSVG-------EDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS----PTEFVTGGF- 176 (343)
Q Consensus 111 ~~~h~~~v~~~~~~--~~~~~s~s-------~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~l~t~~~- 176 (343)
...-...|.....+ .++++..| -.|.+.+|..+.+ ..+.+++|.. ....+.... ...|..+..
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ieGhaa-~F~~~~~~g~~~~~~lf~fa~r~ 222 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAA-SFAQFKMEGNAEESTLFCFAVRG 222 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC--CEEEECCSEE-EEEEEECTTCSSEEEEEEEEECS
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc--ccchheeeee-eeEEEecCCCCCCceEEEEEEec
Confidence 11112345555555 56655443 2467889998876 4566677754 344444332 223444443
Q ss_pred --CCcEEEEEccccCCCCCee-----E-EecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeee
Q 019258 177 --GYGLQWWDLRRAGSGGPVL-----Q-FKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248 (343)
Q Consensus 177 --d~~i~iwd~~~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~ 248 (343)
.+++++-++.....+.+.. . +...+. ..+.--++..++.-. ++..-+.-|.+.+||+.++.......
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~----~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA----QNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp TTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTS----TTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCcEEEEEEcCCCccCCCCccceeeeeeCCccc----ccCceeEEEecccCC-EEEEEecCceEEEEecccceeeeeec
Confidence 3789999985410012211 1 111111 114566777777644 55567899999999999976554433
Q ss_pred cCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEec
Q 019258 249 GVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 249 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~ 301 (343)
.....|..-+.+.... -++.....|.+....-
T Consensus 298 -----------Is~~~iF~t~~~~~~~----------Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 298 -----------ISGETIFVTAPHEATA----------GIIGVNRKGQVLSVCV 329 (494)
T ss_dssp -----------CCSSCEEEEEEETTTT----------EEEEEETTCEEEEEEE
T ss_pred -----------ccCCceEEecccCCCC----------cEEEEccCceEEEEEE
Confidence 2345665555544333 3566667777655443
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=82.22 E-value=21 Score=29.88 Aligned_cols=149 Identities=10% Similarity=-0.030 Sum_probs=70.5
Q ss_pred cCCCeEEEEcC-----C--C----cEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCC--------CcEEEE
Q 019258 80 SHQSLVAASTL-----S--G----SLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGED--------GRVNLV 140 (343)
Q Consensus 80 ~~~~~l~~~s~-----d--g----~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~d--------g~v~~w 140 (343)
.++.+++.|+. . . .+.+||....+-..+.... ........+.+.+..++.|+.+ ..+..+
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP-SPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS-SCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC-cchhceeEEEECCEEEEEeCCcCCCCCcccceEEEE
Confidence 36777777773 1 1 2666776644322221111 1111112222336666666632 458888
Q ss_pred ECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeC------CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEE
Q 019258 141 SVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGF------GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSV 214 (343)
Q Consensus 141 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 214 (343)
|..+.+ -...........-.++....+..++.|+. -..+.+||+.+ .....+......+ ....++
T Consensus 123 d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~~~~p~~r----~~~~~~ 193 (315)
T 4asc_A 123 DRLSFK-WGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK----FEWKELAPMQTAR----SLFGAT 193 (315)
T ss_dssp ETTTTE-EEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTT----TEEEECCCCSSCC----BSCEEE
T ss_pred CCCCCc-EeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCC----CeEEECCCCCCch----hceEEE
Confidence 988763 22221111110112222233556777776 24688888866 2222222111111 112233
Q ss_pred EEcCCCCeEEEEEecCC-----cEEEEEccCC
Q 019258 215 DIHPSRKHTCLAGGSSG-----TVFAWDLRWQ 241 (343)
Q Consensus 215 ~~~p~~~~~~~sg~~dg-----~v~iwd~~~~ 241 (343)
.+ +..+++.|+.++ .+.+||+.+.
T Consensus 194 ~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 194 VH---DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EE---TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred EE---CCEEEEEeccCCCCccceEEEEECCCC
Confidence 33 235777787655 4888888763
No 327
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.85 E-value=38 Score=32.55 Aligned_cols=234 Identities=11% Similarity=0.048 Sum_probs=122.3
Q ss_pred CCCeeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEE
Q 019258 71 PTRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFK 149 (343)
Q Consensus 71 ~~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~ 149 (343)
...|.++.-.....|-.|+.+| +..||-...... ..........|.++... ...+-.+..+| +..+|..+.+ ..
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~~~--~~~~~~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~-f~ 95 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQQH--FTYGENNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADR-YE 95 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSC-EEEECSSCEEEC--SCTTSTTSSCEEEEEEETTTEEEEEETTE-EEEEETTTTE-EC
T ss_pred cceEEEEEECCCCCEEEEECCC-ccccCCCceEEE--EccCCCCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCE-EE
Confidence 3468888776556677777887 555653321111 11111123468887666 56666667666 7899987753 22
Q ss_pred EEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEec
Q 019258 150 RVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGS 229 (343)
Q Consensus 150 ~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~ 229 (343)
. ........|.++... .+.+-.++.+ .|..+|... ..+..+.... .......|.++....++. +. .|+.
T Consensus 96 ~-~~~~~~~~i~~i~~~-~g~lWigt~~-Gl~~~~~~~----~~~~~~~~~~--~~l~~~~i~~i~~d~~g~-lW-igt~ 164 (758)
T 3ott_A 96 Q-PETDFPTDVRTMALQ-GDTLWLGALN-GLYTYQLQS----RKLTSFDTRR--NGLPNNTIYSIIRTKDNQ-IY-VGTY 164 (758)
T ss_dssp C-CSCCCCSCEEEEEEE-TTEEEEEETT-EEEEEETTT----CCEEEECHHH--HCCSCSCEEEEEECTTCC-EE-EEET
T ss_pred C-cccCCCceEEEEEec-CCcEEEEcCC-cceeEeCCC----CeEEEeccCC--CCcCCCeEEEEEEcCCCC-EE-EEeC
Confidence 1 111111146666543 4456666665 677888755 3333341110 001114588888887765 33 3555
Q ss_pred CCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccccc
Q 019258 230 SGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELL 309 (343)
Q Consensus 230 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~ 309 (343)
+ -+..+|..+.... .+.. ... .......|.++...+++. .|..++. +.|..++.........
T Consensus 165 ~-Gl~~~~~~~~~~~-~~~~-~~~----~~~~~~~i~~i~~d~~~~----------~lWigt~-~Gl~~~~~~~~~~~~~ 226 (758)
T 3ott_A 165 N-GLCRYIPSNGKFE-GIPL-PVH----SSQSNLFVNSLLEDTTRQ----------CVWIGTE-GYLFQYFPSTGQIKQT 226 (758)
T ss_dssp T-EEEEEETTTTEEE-EECC-CCC----TTCSSCCEEEEEEETTTT----------EEEEEEE-EEEEEEETTTTEEEEE
T ss_pred C-CHhhCccCCCceE-EecC-CCc----cccccceeEEEEEECCCC----------EEEEEEC-CCCeEEcCCCCeEEec
Confidence 4 4778887653321 1110 000 001123478887776544 3565664 4577777654322211
Q ss_pred cc--ccccceeeecCCCCCeeEEccCCceEEEEe
Q 019258 310 AE--PCAINSFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 310 ~~--~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
.. ...|.++..+. +|.. -.|++. .+++++
T Consensus 227 ~~l~~~~i~~i~~d~-~g~l-WigT~~-Gl~~~~ 257 (758)
T 3ott_A 227 EAFHNNSIKSLALDG-NGDL-LAGTDN-GLYVYH 257 (758)
T ss_dssp EEEEEEEEEEEEECT-TCCE-EEEETT-EEEEEC
T ss_pred cCCCCCeEEEEEEcC-CCCE-EEEeCC-ceeEEe
Confidence 11 24578887776 3344 444444 566654
No 328
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=81.80 E-value=26 Score=30.57 Aligned_cols=199 Identities=8% Similarity=-0.065 Sum_probs=91.6
Q ss_pred CCEEEEEeCCCcEEEEECCC-CceEEEEEcCCCccceEEEEeCC--CCEEEEEeCCC----cEEEEEccccCCCCCeeEE
Q 019258 125 GSECVSVGEDGRVNLVSVIG-GGEFKRVYDGNGLVGFNCVKWAS--PTEFVTGGFGY----GLQWWDLRRAGSGGPVLQF 197 (343)
Q Consensus 125 ~~~~~s~s~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~l~t~~~d~----~i~iwd~~~~~~~~~~~~~ 197 (343)
...+..+...| +.+.+... +..............+.++.+.| .+.+..++..+ .|... .. .++....+
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s--~D--~G~tW~~~ 96 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS--DD--GGGNWTEA 96 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE--SS--TTSCCEEC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe--CC--CCCCceEC
Confidence 34566777776 44444332 21122211111222699999987 66666676655 44433 22 13333322
Q ss_pred ecccC-CCCC------cccCeEEEEEcCCC-CeEEEEEecCCcEEEEEccCCceeeeeecCCCCccc---c------cCC
Q 019258 198 KGNFG-SQGK------ASGMIHSVDIHPSR-KHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAV---T------HSL 260 (343)
Q Consensus 198 ~~~~~-~~~~------~~~~i~~v~~~p~~-~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~---~------~~~ 260 (343)
..... .... ....|.++++.|.. +..+.+++..+.|...+ ................. . ...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~--DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~ 174 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST--DHGASWEPVAGFNDHPMRRAWTGGEQDGTP 174 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES--STTSBCEECHHHHTCTTHHHHHCCC----C
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc--CCCCCeEECcCccCCccccccccccccCCC
Confidence 21100 0000 00247889998742 33345566666655543 11111111100000000 0 001
Q ss_pred ccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccccccc--------------ccccceeeecCCCCC
Q 019258 261 SESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAE--------------PCAINSFDIDPQNPS 326 (343)
Q Consensus 261 h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~--------------~~~i~s~~~~~~~~~ 326 (343)
....+..|.++|.++. .++.+..++.|+..+...+..+.... ...+.++.+++.++.
T Consensus 175 ~~~~i~~i~~d~~~~~---------~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~ 245 (394)
T 3b7f_A 175 DGPKMHSILVDPRDPK---------HLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPD 245 (394)
T ss_dssp CCCEEEEEEECTTCTT---------CEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTT
T ss_pred CCCceeEEEECCCCCC---------EEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCC
Confidence 2346889999986543 56666666666654322211111110 124788888886556
Q ss_pred eeEEccCCceEEEE
Q 019258 327 DVICSLEWESIAIV 340 (343)
Q Consensus 327 ~l~~~~~~~~i~~~ 340 (343)
.|..+.. +.|+..
T Consensus 246 ~l~vg~~-~gl~~s 258 (394)
T 3b7f_A 246 ILYQQNH-CGIYRM 258 (394)
T ss_dssp EEEEEET-TEEEEE
T ss_pred EEEEEcC-CeEEEe
Confidence 6766654 346554
No 329
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=78.99 E-value=32 Score=29.94 Aligned_cols=151 Identities=13% Similarity=0.072 Sum_probs=73.1
Q ss_pred CCEEEEEeCCCcEEEEEccccCCCCCeeEEe-cccCCCCCcccCeEEEEEcCCCCeEEEEEecCC----cEEEEEccCCc
Q 019258 168 PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFK-GNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG----TVFAWDLRWQQ 242 (343)
Q Consensus 168 ~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg----~v~iwd~~~~~ 242 (343)
...|..++..| +.+++... .+.....+. .... ..|.+|+++|..+..+.+++..| .|...+ ...
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~--~g~~W~~~~~~~~~------~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~--D~G 90 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDP--ARRTWELRGPVFLG------HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD--DGG 90 (394)
T ss_dssp CCEEEEEETTE-EEEEEECT--TSCSEEEEEEESTT------SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES--STT
T ss_pred CCEEEEEecCc-eEEEECCC--CCCCceECCccCCC------CceEEEEECCCCCCeEEEEecCCCCCccEEEeC--CCC
Confidence 45677788776 44444321 123333321 1111 45999999983333334555555 444432 212
Q ss_pred eeeeeecCCCCcccccCC------ccccEEEEEEeecC-CCCcCCCCCccceEEEecCCeEEEEecCCCcccccc-----
Q 019258 243 QSIVLSGVGTGEAVTHSL------SESEVWEVQYDCHT-KSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLA----- 310 (343)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~------h~~~v~~v~~~p~~-~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~----- 310 (343)
........... ..... ....|.+|++.|.+ +. .++.+...+.|+..+......+...
T Consensus 91 ~tW~~~~~~~~--~~~~~~~~~~~~~~~i~~l~~~~~~~~~---------~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~ 159 (394)
T 3b7f_A 91 GNWTEATRPPA--FNKAPEGETGRVVDHVFWLTPGHASEPG---------TWYAGTSPQGLFRSTDHGASWEPVAGFNDH 159 (394)
T ss_dssp SCCEECSBCCC--CCCCC----CCCCCEEEEEEECCTTSTT---------CEEEEEETTEEEEESSTTSBCEECHHHHTC
T ss_pred CCceECCcccc--CCCcccccccccccceeEEEeCCCCCCC---------EEEEEecCCcEEEEcCCCCCeEECcCccCC
Confidence 21221110000 00000 12358889998854 44 6778777887776543222211111
Q ss_pred ---------------cccccceeeecCCCCCeeEEccCCceEEEE
Q 019258 311 ---------------EPCAINSFDIDPQNPSDVICSLEWESIAIV 340 (343)
Q Consensus 311 ---------------~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~ 340 (343)
....+.++.++|.+...|..+...+.|+..
T Consensus 160 p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 160 PMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp TTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred ccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence 112467888887544555555545556654
No 330
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=76.33 E-value=43 Score=30.06 Aligned_cols=106 Identities=9% Similarity=0.104 Sum_probs=54.8
Q ss_pred ceEEEEeCCCCEEEEEeCCC-cEEEEEccccCCCCC--eeEEecccCCCCCcccCeEEEEEcCC---CCeEEEEEec---
Q 019258 159 GFNCVKWASPTEFVTGGFGY-GLQWWDLRRAGSGGP--VLQFKGNFGSQGKASGMIHSVDIHPS---RKHTCLAGGS--- 229 (343)
Q Consensus 159 ~v~~~~~~~~~~l~t~~~d~-~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~v~~~p~---~~~~~~sg~~--- 229 (343)
....++|.|...++.+...+ .|++++... +.. +..+..... .....+....|+++|+ +..++++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~---g~~~~~~~~~~~~~-~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPES---GSVKTVFQVPEIVN-DADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCCC-CTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCC---CcEeEEecCCcccc-ccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 47899999944455555554 688887643 221 112211100 0000145789999995 4566665543
Q ss_pred ---------CCcEEEEEccCCc----eeeeee-cCCCCcccccCCccccEEEEEEeecCC
Q 019258 230 ---------SGTVFAWDLRWQQ----QSIVLS-GVGTGEAVTHSLSESEVWEVQYDCHTK 275 (343)
Q Consensus 230 ---------dg~v~iwd~~~~~----~~~~~~-~~~~~~~~~~~~h~~~v~~v~~~p~~~ 275 (343)
...|..|++.... .+..++ .... ...| ....|+|.|++.
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-----~~~H--~~~~l~f~pDG~ 156 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-----SKDH--QSGRLVIGPDQK 156 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-----CSSC--CEEEEEECTTSC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-----CCCC--CCCeEeECCCCe
Confidence 2356666654321 111111 0010 0123 467899999886
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=74.86 E-value=36 Score=28.43 Aligned_cols=153 Identities=14% Similarity=0.091 Sum_probs=70.7
Q ss_pred EEEccCCCeEEEEcC----CC-------cEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCC-------CcE
Q 019258 76 SLSTSHQSLVAASTL----SG-------SLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGED-------GRV 137 (343)
Q Consensus 76 ~v~~~~~~~l~~~s~----dg-------~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~d-------g~v 137 (343)
++...++.+++.|+. ++ .+.+||....+-..+.... ..........+.+..++.|+.+ ..+
T Consensus 51 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 51 SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLP-SARCLFGLGEVDDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp EEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBS-SCBCSCEEEEETTEEEEEEEEBTTTCCEEEEE
T ss_pred EEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCC-ccccccceEEECCEEEEEcCccCCCCcccceE
Confidence 333346777888873 12 1667776644322222111 1111122233346677777754 246
Q ss_pred EEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeC------CCcEEEEEccccCCCCCeeEEecccCCCCCcccCe
Q 019258 138 NLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGF------GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMI 211 (343)
Q Consensus 138 ~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i 211 (343)
.++|..+.+ -...-.......-.++....+..++.|+. -..+.+||+.+ .....+......+ ...
T Consensus 130 ~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~~~~p~~r----~~~ 200 (318)
T 2woz_A 130 LCYDPVAAK-WSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKK----GDWKDLAPMKTPR----SMF 200 (318)
T ss_dssp EEEETTTTE-EEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTT----TEEEEECCCSSCC----BSC
T ss_pred EEEeCCCCC-EeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCC----CEEEECCCCCCCc----ccc
Confidence 778887763 33221111110111222233555666664 24588899866 2233332211111 112
Q ss_pred EEEEEcCCCCeEEEEEecCC-----cEEEEEccCC
Q 019258 212 HSVDIHPSRKHTCLAGGSSG-----TVFAWDLRWQ 241 (343)
Q Consensus 212 ~~v~~~p~~~~~~~sg~~dg-----~v~iwd~~~~ 241 (343)
.++.+ + ..+++.|+.++ .+.+||+.+.
T Consensus 201 ~~~~~--~-~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 201 GVAIH--K-GKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp EEEEE--T-TEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred eEEEE--C-CEEEEEcCcCCCCccceEEEEECCCC
Confidence 22333 2 35677776543 4678888653
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=72.98 E-value=98 Score=32.59 Aligned_cols=182 Identities=15% Similarity=0.085 Sum_probs=98.8
Q ss_pred ceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEEEEEccC-ceeeeeecc-CCccccCeEEEEec--C
Q 019258 50 SLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSSAM-QVLLSVDEN-SGFHVGPISGVDLT--G 125 (343)
Q Consensus 50 ~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~-~~~~~~~~~-~~~h~~~v~~~~~~--~ 125 (343)
.|+++++..+ ..+++...+.+|.=.+|.+++.|+..+. ..|.-|++.. ..+..+... ...-...|.....+ .
T Consensus 87 ~lQiFnl~~k---~klks~~~~e~VvfWkWis~~~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~ 162 (1630)
T 1xi4_A 87 TLQIFNIEMK---SKMKAHTMTDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQ 162 (1630)
T ss_pred eEEEeehHHh---hhhcccccCCCceEEEecCCCeeEEEcC-CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCC
Confidence 4789999553 3355667777898889986666655544 4699999963 222222211 00012244444444 5
Q ss_pred CEEEEEe-------CCCcEEEEECCCCceEEEEEcCCCccceEEEEeC--C--CCEEEEEeC---CCcEEEEEccccCCC
Q 019258 126 SECVSVG-------EDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWA--S--PTEFVTGGF---GYGLQWWDLRRAGSG 191 (343)
Q Consensus 126 ~~~~s~s-------~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~--~--~~~l~t~~~---d~~i~iwd~~~~~~~ 191 (343)
++++..| -.|.+.+|..+.+ ..+.+++|.. ....+... + ...+..+.. .+.++|-++.....+
T Consensus 163 kW~~l~gi~~~~~~v~G~mQLyS~er~--~sQ~iegha~-~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~ 239 (1630)
T 1xi4_A 163 KWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAA-SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG 239 (1630)
T ss_pred CeEEEEeeccCCCcccceeeeeecccc--cchhhhHhHh-hhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccC
Confidence 5555433 3478889988775 3444555543 23333322 1 222222222 378999888541001
Q ss_pred CCeeE------EecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCce
Q 019258 192 GPVLQ------FKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQ 243 (343)
Q Consensus 192 ~~~~~------~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~ 243 (343)
.+..+ +...+. ..+.--++..++.- .++..-+.-|.|.++|+.++..
T Consensus 240 ~~~f~kk~~~~~~~~~~----~~Dfpv~~~vs~k~-g~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 240 NQPFPKKAVDVFFPPEA----QNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred CCCCccccccccCCccc----ccCcceEEEecccc-CEEEEEecCceEEEEecccchh
Confidence 22211 111111 11334566666654 3555668899999999998654
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=71.37 E-value=73 Score=30.40 Aligned_cols=150 Identities=12% Similarity=0.043 Sum_probs=75.8
Q ss_pred CCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCc-c-----CCCCCCeeEEEcc--CCCeEEEEcCC------CcEEEEE
Q 019258 33 LSKLAVLAIYDTDADSPSLETHSISLPASLTPHS-Q-----WTPPTRISSLSTS--HQSLVAASTLS------GSLHVLS 98 (343)
Q Consensus 33 ~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~-~-----~~~~~~v~~v~~~--~~~~l~~~s~d------g~v~v~~ 98 (343)
++.+++.|+.++ ...-.+++++..... +..+. . .+.+-.-.++... ++.+++.|+.+ ..+.+||
T Consensus 397 ~~~iyv~GG~~~-~~~~~v~~yd~~~~~-W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 397 GNDVFYMGGSNP-YRVNEILQLSIHYDK-IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp SSCEEEECCBSS-SBCCCEEEEEECSSC-EEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred CCEEEEECCCCC-CCcCcEEEEECCCCe-EEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 457788888765 222346677775432 22222 1 1222112233333 56666776643 3577788
Q ss_pred ccCceeeeeeccCCccccCeEEEEe-cCCEEEEEeCCC--cEEEEECCCCceEEEEEc-----CCCccceEEEEeCC--C
Q 019258 99 SAMQVLLSVDENSGFHVGPISGVDL-TGSECVSVGEDG--RVNLVSVIGGGEFKRVYD-----GNGLVGFNCVKWAS--P 168 (343)
Q Consensus 99 ~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~s~s~dg--~v~~wd~~~~~~~~~~~~-----~~~~~~v~~~~~~~--~ 168 (343)
.....-..+.... .......++.+ .+..++.||.++ .+.+||..+.. -..... .... ...++.+.. +
T Consensus 475 ~~t~~W~~~~~~p-~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~-~~~a~v~~~~~~ 551 (695)
T 2zwa_A 475 MKTREWSMIKSLS-HTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSL-VSAGLEFDPVSK 551 (695)
T ss_dssp TTTTEEEECCCCS-BCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCC-BSCEEEEETTTT
T ss_pred CCCCcEEECCCCC-CCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCccc-ceeEEEEeCCCC
Confidence 7654322221111 11112234444 477888887654 68899998863 222211 0111 123344443 4
Q ss_pred CEEEEEeC--C-----CcEEEEEccc
Q 019258 169 TEFVTGGF--G-----YGLQWWDLRR 187 (343)
Q Consensus 169 ~~l~t~~~--d-----~~i~iwd~~~ 187 (343)
..++.||. + +.+..||+..
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccC
Confidence 46666765 2 4588899877
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=70.29 E-value=12 Score=32.26 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=64.8
Q ss_pred CCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEe----cCCEEEEE--eCCCcEEEEECCCCceEEEEEcCC
Q 019258 82 QSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDL----TGSECVSV--GEDGRVNLVSVIGGGEFKRVYDGN 155 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~----~~~~~~s~--s~dg~v~~wd~~~~~~~~~~~~~~ 155 (343)
++++++++.||.|.-+|..+++..=..... ...+.....- .+..++.+ ..||.|..++..++..........
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 467888999999999988765544222111 1112222111 12234433 589999999988774322221110
Q ss_pred --CccceEEEE----e------CCCCEEEEEeCCCcEEEEEccccCCCCCeeEEec
Q 019258 156 --GLVGFNCVK----W------ASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKG 199 (343)
Q Consensus 156 --~~~~v~~~~----~------~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~ 199 (343)
...++.. . . +....+++++.++++.-.|+++ ++.+.++..
T Consensus 88 lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~t---G~~~W~~~~ 139 (339)
T 2be1_A 88 LVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLN---GEIISAFGP 139 (339)
T ss_dssp HHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTT---CCEEEEEST
T ss_pred ceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCC---CcEEEEEec
Confidence 1111221 0 0 1355788999999999999999 888877763
No 335
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=69.67 E-value=60 Score=31.23 Aligned_cols=118 Identities=13% Similarity=0.117 Sum_probs=62.5
Q ss_pred cCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceE
Q 019258 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAM 288 (343)
Q Consensus 209 ~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~ 288 (343)
+.|..|+++|..+.++.++...|.|...+=. ......+...... ..-....|.+|+++|.++. .++
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~--G~tW~~i~~~~~~---~~~~~~~i~~i~~dp~~~~---------~v~ 88 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPS--TETWIPLLDHFQM---DEYSYYGVESIATDPVDPN---------RVY 88 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETT--TTEEEECCTTCCG---GGGGGGCEEEEEECSSSTT---------CEE
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCC--CCCEEECcCccCc---ccccCCCcceEEeCCCCCC---------EEE
Confidence 3799999999876666778877777666422 2222222100000 0001246999999997664 444
Q ss_pred EEecC-------CeEEEEecCCC-cc-ccccc--------c--cccceeeecCCCCCeeEEccCC-ceEEEE
Q 019258 289 FCSED-------GILAVVEQGEE-PF-ELLAE--------P--CAINSFDIDPQNPSDVICSLEW-ESIAIV 340 (343)
Q Consensus 289 s~s~d-------g~i~~~~~~~~-~~-~~~~~--------~--~~i~s~~~~~~~~~~l~~~~~~-~~i~~~ 340 (343)
.+... +...+|+.... .. +.... + ..+..+.++|.+++.|.++.+. ..|+..
T Consensus 89 v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S 160 (737)
T 2cn3_A 89 IVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRS 160 (737)
T ss_dssp EEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEE
T ss_pred EEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEe
Confidence 44321 01333433211 11 11100 1 1247899998777888888754 456543
No 336
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=69.30 E-value=74 Score=30.75 Aligned_cols=121 Identities=12% Similarity=0.153 Sum_probs=61.3
Q ss_pred cCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCC-Ccccc-cCCccccEEEEEEeecCCCCcCCCCCccc
Q 019258 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGT-GEAVT-HSLSESEVWEVQYDCHTKSSNISSSRVLP 286 (343)
Q Consensus 209 ~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~-~~~h~~~v~~v~~~p~~~~~~~~~~~~~~ 286 (343)
+.|.+|.++|..+.++.++...|.|...+ ............. ...+. .......+.+|+++|.++. .
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~~ggv~~S~--DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~---------~ 89 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTDIGGTYRWN--AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPD---------R 89 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE--TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTT---------C
T ss_pred CceeEEEeCCCCCCEEEEEeccCcEEEEC--CCCCCeeECccCccccccCCCcccccceeEEEECCCCCC---------E
Confidence 67999999999877777778777665443 2222222211000 00000 0001245899999997654 4
Q ss_pred eEEEec-------CCeEEEEecCCCcccccccc--------c-cc-ceeeecCCCCCeeEEccCCceEEEE
Q 019258 287 AMFCSE-------DGILAVVEQGEEPFELLAEP--------C-AI-NSFDIDPQNPSDVICSLEWESIAIV 340 (343)
Q Consensus 287 l~s~s~-------dg~i~~~~~~~~~~~~~~~~--------~-~i-~s~~~~~~~~~~l~~~~~~~~i~~~ 340 (343)
++.+.. .+.|+.-.-..+.-+....+ . .+ ..++++|.+...+.++.+.+.|+..
T Consensus 90 ~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~S 160 (763)
T 3a0f_A 90 LYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWRS 160 (763)
T ss_dssp EEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEEE
T ss_pred EEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEEE
Confidence 554432 34443321111111111111 1 12 4688888666777777766666643
No 337
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=69.23 E-value=36 Score=33.16 Aligned_cols=117 Identities=16% Similarity=0.185 Sum_probs=61.6
Q ss_pred cCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceE
Q 019258 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAM 288 (343)
Q Consensus 209 ~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~ 288 (343)
+.|.+|+++|..+.++.+++..|.|...+= .............. ..-....|.+|+++|.++. .++
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D--gG~tW~~~~~~~~~---~~~~~~~i~~ia~dp~~~~---------~i~ 80 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDA--GTSKWIPLNDFIEA---QDMNIMGTESIALDPNNPD---------RLY 80 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEET--TTTEEEESCTTCCG---GGGGGCSEEEEEEETTEEE---------EEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecC--CCCCeeECccCCCc---ccccCCceeEEEECCCCCC---------EEE
Confidence 679999999987667777888887765542 12222222100000 0001346999999986553 344
Q ss_pred EEecC------CeEEE-------EecCCCcccc---cccccccceeeecCCCCCeeEEccCCceEEE
Q 019258 289 FCSED------GILAV-------VEQGEEPFEL---LAEPCAINSFDIDPQNPSDVICSLEWESIAI 339 (343)
Q Consensus 289 s~s~d------g~i~~-------~~~~~~~~~~---~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~~ 339 (343)
.+..+ +.|+. |......... ......+..++++|.+++.+.++...+.|+.
T Consensus 81 ~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~ 147 (789)
T 1sqj_A 81 LAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK 147 (789)
T ss_dssp EEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE
T ss_pred EEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE
Confidence 44322 44543 3321111000 0001135678888766567777765555554
No 338
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=69.05 E-value=56 Score=28.18 Aligned_cols=59 Identities=10% Similarity=0.074 Sum_probs=35.8
Q ss_pred cCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeec
Q 019258 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCH 273 (343)
Q Consensus 209 ~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 273 (343)
..-..++|.|++. ++++--..|.|++++...+... .+..+.. +....+.....|+++|+
T Consensus 32 ~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~-~v~~~~~----v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 32 NSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKT-ELGEVPG----VSPSGEGGLLGIALSPD 90 (347)
T ss_dssp SSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEE-EEEECTT----CCCBTTBSEEEEEECTT
T ss_pred CCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEe-eecccCc----eeecCCCCceeeEeccc
Confidence 4578999999986 5555444899999986543321 1110000 00123567899999995
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=68.54 E-value=28 Score=29.99 Aligned_cols=116 Identities=8% Similarity=0.048 Sum_probs=64.9
Q ss_pred CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCC---CCEEEEE--eCCCcEEEEEccccCCCCCeeEEec
Q 019258 125 GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWAS---PTEFVTG--GFGYGLQWWDLRRAGSGGPVLQFKG 199 (343)
Q Consensus 125 ~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~l~t~--~~d~~i~iwd~~~~~~~~~~~~~~~ 199 (343)
+..++.++.||.|.-.|..+++..-+. ......++....-.. .+.++.+ ..||.|..+|... +.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~-~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~---G~~~~~~~~ 85 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSI-EPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ---GLQKLPLSI 85 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEE-CGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT---EEEEEEEEH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEe-cCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC---CcEEeeecc
Confidence 567889999999999999998644333 322111222221111 2244444 5799999999876 433222321
Q ss_pred ccCCCCCcccCeEEEEEc-----C---CCCeEEEEEecCCcEEEEEccCCceeeeee
Q 019258 200 NFGSQGKASGMIHSVDIH-----P---SRKHTCLAGGSSGTVFAWDLRWQQQSIVLS 248 (343)
Q Consensus 200 ~~~~~~~~~~~i~~v~~~-----p---~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~ 248 (343)
... ....++.. .-. + .....+.+|+.+|++...|+++++....+.
T Consensus 86 ~~l---v~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 86 RQL---VSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HHH---HTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ccc---eecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 110 00022221 100 0 012456789999999999999877665553
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=66.01 E-value=94 Score=29.62 Aligned_cols=154 Identities=7% Similarity=0.022 Sum_probs=78.0
Q ss_pred cCCCeEEEEcCC----CcEEEEEccCceeeeee-cc----CCccccCeEEEEe--cCCEEEEEeCC------CcEEEEEC
Q 019258 80 SHQSLVAASTLS----GSLHVLSSAMQVLLSVD-EN----SGFHVGPISGVDL--TGSECVSVGED------GRVNLVSV 142 (343)
Q Consensus 80 ~~~~~l~~~s~d----g~v~v~~~~~~~~~~~~-~~----~~~h~~~v~~~~~--~~~~~~s~s~d------g~v~~wd~ 142 (343)
.++.+++.|+.+ ..+.+||.....-..+. .. ..........+.+ .+..++.||.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 356667777643 46778887644322222 10 0011112344555 56666777643 34778888
Q ss_pred CCCceEEEEEcCCCccceEEEEe-CCCCEEEEEeCCC--cEEEEEccccCCCCCeeEEec---ccCCCCCcccCeEEEEE
Q 019258 143 IGGGEFKRVYDGNGLVGFNCVKW-ASPTEFVTGGFGY--GLQWWDLRRAGSGGPVLQFKG---NFGSQGKASGMIHSVDI 216 (343)
Q Consensus 143 ~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~t~~~d~--~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~v~~ 216 (343)
.+.+ -...-.......-.++.. ..+..++.||.++ .+.+||+.+ .....+.. ....+ ....++.+
T Consensus 476 ~t~~-W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t----~~W~~~~~~g~~p~~r----~~~~a~v~ 546 (695)
T 2zwa_A 476 KTRE-WSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE----EIFKDVTPKDEFFQNS----LVSAGLEF 546 (695)
T ss_dssp TTTE-EEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT----TEEEECCCSSGGGGSC----CBSCEEEE
T ss_pred CCCc-EEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCC----CceEEccCCCCCCCcc----cceeEEEE
Confidence 7753 222211111101222333 3567788887754 688899866 22333321 11001 11233555
Q ss_pred cCCCCeEEEEEec--C-----CcEEEEEccCCc
Q 019258 217 HPSRKHTCLAGGS--S-----GTVFAWDLRWQQ 242 (343)
Q Consensus 217 ~p~~~~~~~sg~~--d-----g~v~iwd~~~~~ 242 (343)
......+++.|+. + ..+..||+.+..
T Consensus 547 ~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 547 DPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred eCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 5543457777876 2 358899987754
No 341
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.20 E-value=1.1e+02 Score=30.36 Aligned_cols=36 Identities=19% Similarity=0.139 Sum_probs=28.3
Q ss_pred ceEEEEeCC-CCEEEEEeCCCcEEEEEccccCCCCCeeEE
Q 019258 159 GFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGSGGPVLQF 197 (343)
Q Consensus 159 ~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~ 197 (343)
.+.++...+ ...+++-+.|+++|+|++.+ ++.+.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t---~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLST---NQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTT---TEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCC---CCeEeee
Confidence 456666666 67889999999999999988 6666654
No 342
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=63.65 E-value=62 Score=26.76 Aligned_cols=219 Identities=10% Similarity=0.076 Sum_probs=115.3
Q ss_pred CCeeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEE
Q 019258 72 TRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 72 ~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~ 151 (343)
..|..++......++. . ||.|..|-......+-+.. .....|..++......+... ||.|..|-.....+.- +
T Consensus 24 ~~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gqlg~p~---~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg-~ 96 (282)
T 3qhy_B 24 SGVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQLTMPA---ATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTT-V 96 (282)
T ss_dssp SSCCEEEECSSEEEEE-E-TTEEEEEECCSSSTTSCCG---GGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTC-C
T ss_pred CCCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCCCCCc---cCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCC-C
Confidence 3677887764444444 5 9999999766322221111 12236777777644444445 9999999865421110 0
Q ss_pred EcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCC
Q 019258 152 YDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSG 231 (343)
Q Consensus 152 ~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg 231 (343)
...-. ..|..++......++ -. ||.|..|-... .++...... . ...|..|+.... +.++. . ||
T Consensus 97 P~~~~-~~v~~ia~G~~hs~a-l~-~G~v~~wG~n~--~gqlg~~~~--~------~~~i~~i~~G~~--~~~~l-~-~G 159 (282)
T 3qhy_B 97 PAEAR-SGVDAIAAGAWASYA-LK-DGKVIAWGDDS--DGQTTVPAE--A------QSGVTALDGGVY--TALAV-K-NG 159 (282)
T ss_dssp CGGGS-SSEEEEEEETTEEEE-EE-TTEEEEEECCT--TSTTSCCGG--G------GSSEEEEEECSS--EEEEE-E-TT
T ss_pred CcccC-CCeEEEECcCCEEEE-Ee-CCeEEEecCCC--CCcCCCCcc--C------CCCeEEEEcccC--EEEEE-E-CC
Confidence 00001 147777765544344 44 99999998655 222211111 0 145777776543 34433 3 79
Q ss_pred cEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCc-ccccc
Q 019258 232 TVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-FELLA 310 (343)
Q Consensus 232 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~~~~~ 310 (343)
.|+.|-.....+. ... ..-...|..|+.-.. +.+.- .||.|+.|-.+..- ..+-.
T Consensus 160 ~v~~wG~n~~gql-g~p----------~~~~~~v~~i~~G~~------------hs~al-~~G~v~~wG~n~~gqlg~p~ 215 (282)
T 3qhy_B 160 GVIAWGDNYFGQT-TVP----------AEAQSGVDDVAGGIF------------HSLAL-KDGKVIAWGDNRYKQTTVPT 215 (282)
T ss_dssp EEEEEECCTTSTT-SCC----------GGGGSSEEEEEECSS------------EEEEE-ETTEEEEEECCTTSTTCCCG
T ss_pred EEEEecCCCCCCC-CCc----------eecCCCeEEEEecCC------------EEEEE-ECCeEEEEECCCCCCCCCCc
Confidence 9999976432111 010 112345777765433 23334 69999999764321 11111
Q ss_pred -cccccceeeecCCCCCeeEEccCCceEEEEeC
Q 019258 311 -EPCAINSFDIDPQNPSDVICSLEWESIAIVSR 342 (343)
Q Consensus 311 -~~~~i~s~~~~~~~~~~l~~~~~~~~i~~~~~ 342 (343)
....|..+.... ...++-. ++.+|.|-+
T Consensus 216 ~~~~~v~~i~~G~---~h~~al~-~g~v~~wG~ 244 (282)
T 3qhy_B 216 EALSGVSAIASGE---WYSLALK-NGKVIAWGS 244 (282)
T ss_dssp GGGSSCCEEEECS---SCEEEEE-TTEEEEEST
T ss_pred ccCCCceEEEcCC---CEEEEEE-CCEEEEecC
Confidence 123566666554 2333333 778888743
No 343
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=63.01 E-value=64 Score=26.68 Aligned_cols=238 Identities=13% Similarity=0.118 Sum_probs=124.4
Q ss_pred ceeeEEecCCCCCCCCeEEEEeecCCCCCCceeeeeCCCCCCCCCCccCCCCCCeeEEEccCCCeEEEEcCCCcEEEEEc
Q 019258 20 YIDAVRWLPPLSPLSKLAVLAIYDTDADSPSLETHSISLPASLTPHSQWTPPTRISSLSTSHQSLVAASTLSGSLHVLSS 99 (343)
Q Consensus 20 ~i~~v~w~p~~~~~~~~l~t~s~D~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~l~~~s~dg~v~v~~~ 99 (343)
+|..|+--. ...++. . |++ |+.|-.....+.-. .......|..++......++. . ||.|..|-.
T Consensus 25 ~i~~ia~G~-----~h~~~l-~-~G~-----v~~wG~n~~Gqlg~--p~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~ 88 (282)
T 3qhy_B 25 GVDAIAGGY-----FHGLAL-K-GGK-----VLGWGANLNGQLTM--PAATQSGVDAIAAGNYHSLAL-K-DGEVIAWGG 88 (282)
T ss_dssp SCCEEEECS-----SEEEEE-E-TTE-----EEEEECCSSSTTSC--CGGGGSCCCEEEECSSEEEEE-E-TTEEEEEEC
T ss_pred CCcEEEeCC-----CeEEEE-E-CCE-----EEEEeCCCCCCCCC--CccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeC
Confidence 566665443 333444 3 543 66777644322210 111223677777764444555 4 999999976
Q ss_pred cCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCc
Q 019258 100 AMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYG 179 (343)
Q Consensus 100 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~ 179 (343)
.....+-+... -...|..++......+... ||.|..|-.....+.- . .......|..++......++. . |+.
T Consensus 89 n~~Gqlg~P~~---~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg-~-~~~~~~~i~~i~~G~~~~~~l-~-~G~ 160 (282)
T 3qhy_B 89 NEDGQTTVPAE---ARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTT-V-PAEAQSGVTALDGGVYTALAV-K-NGG 160 (282)
T ss_dssp CTTSTTCCCGG---GSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTS-C-CGGGGSSEEEEEECSSEEEEE-E-TTE
T ss_pred CCCCCCCCCcc---cCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCC-C-CccCCCCeEEEEcccCEEEEE-E-CCE
Confidence 63222211111 1246888877766666666 9999999875421111 0 001112477777655444443 3 799
Q ss_pred EEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccC
Q 019258 180 LQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHS 259 (343)
Q Consensus 180 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 259 (343)
|..|-... .++.-..... . ..|..|+... .+.++. +||.|+.|-.....+. .+. .
T Consensus 161 v~~wG~n~--~gqlg~p~~~-~-------~~v~~i~~G~--~hs~al--~~G~v~~wG~n~~gql-g~p----------~ 215 (282)
T 3qhy_B 161 VIAWGDNY--FGQTTVPAEA-Q-------SGVDDVAGGI--FHSLAL--KDGKVIAWGDNRYKQT-TVP----------T 215 (282)
T ss_dssp EEEEECCT--TSTTSCCGGG-G-------SSEEEEEECS--SEEEEE--ETTEEEEEECCTTSTT-CCC----------G
T ss_pred EEEecCCC--CCCCCCceec-C-------CCeEEEEecC--CEEEEE--ECCeEEEEECCCCCCC-CCC----------c
Confidence 99997654 2222111110 0 4577887765 345555 5999999975432111 000 1
Q ss_pred CccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCC-cccccccccccceeeecC
Q 019258 260 LSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEE-PFELLAEPCAINSFDIDP 322 (343)
Q Consensus 260 ~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~-~~~~~~~~~~i~s~~~~~ 322 (343)
.-...|..|+--.. +.+.-. ||+|+.|-.+.. +..+ +..|.+++...
T Consensus 216 ~~~~~v~~i~~G~~------------h~~al~-~g~v~~wG~n~~gq~~v---~~~v~~iaaG~ 263 (282)
T 3qhy_B 216 EALSGVSAIASGEW------------YSLALK-NGKVIAWGSSRTAPSSV---QSGVSSIEAGP 263 (282)
T ss_dssp GGGSSCCEEEECSS------------CEEEEE-TTEEEEESTTCCCCGGG---SSCEEEEEECS
T ss_pred ccCCCceEEEcCCC------------EEEEEE-CCEEEEecCCCCccccC---CCCcEEEEECc
Confidence 11234666665432 334444 999999976543 2222 23455555444
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=62.26 E-value=1.1e+02 Score=32.32 Aligned_cols=117 Identities=11% Similarity=0.114 Sum_probs=66.4
Q ss_pred CCCcEEEEECCCCceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeE
Q 019258 133 EDGRVNLVSVIGGGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIH 212 (343)
Q Consensus 133 ~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 212 (343)
....|.+-|+.++..+.+..-..+ +.-.+|...+++--...++.|||+.+ ...+..+...+ . |.
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~Ad-----sAIMnP~~~iiALrag~~lQiFnl~~---k~klks~~~~e-------~-Vv 109 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKAGKTLQIFNIEM---KSKMKAHTMTD-------D-VT 109 (1630)
T ss_pred CCceEEEEECCCCCCcccccccch-----hhccCCCcceEEEecCCeEEEeehHH---hhhhcccccCC-------C-ce
Confidence 344788899988654433322222 23347744455555689999999988 55565555332 2 33
Q ss_pred EEEE-cCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCC
Q 019258 213 SVDI-HPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTK 275 (343)
Q Consensus 213 ~v~~-~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 275 (343)
-=.| +|. .++-.+ +..|+-|++.....|......+.+ .-...|..-..+++..
T Consensus 110 fWkWis~~---~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~------L~~~QIinY~~d~~~k 163 (1630)
T 1xi4_A 110 FWKWISLN---TVALVT-DNAVYHWSMEGESQPVKMFDRHSS------LAGCQIINYRTDAKQK 163 (1630)
T ss_pred EEEecCCC---eeEEEc-CCeEEEeccCCCCccHHHHhcchh------cccCeeEEeeeCCCCC
Confidence 3344 442 233222 458999999766667665522211 0134566666666655
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=61.68 E-value=45 Score=31.12 Aligned_cols=84 Identities=10% Similarity=-0.074 Sum_probs=53.3
Q ss_pred cCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCceeeeeecCCCCccc-ccCCccccEEEEEEeecCCCCcCCCCCccce
Q 019258 209 GMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAV-THSLSESEVWEVQYDCHTKSSNISSSRVLPA 287 (343)
Q Consensus 209 ~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l 287 (343)
...+.+..+|+|.+++++|--+.+|.++|+++......-......+.+ .+..-.-.-+..+|.+++. ..
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~----------aY 392 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN----------AY 392 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE----------EE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc----------eE
Confidence 346788999999999999999999999999852210000000000000 0011123457889998874 56
Q ss_pred EEEecCCeEEEEecC
Q 019258 288 MFCSEDGILAVVEQG 302 (343)
Q Consensus 288 ~s~s~dg~i~~~~~~ 302 (343)
.|.-.|..|--|+..
T Consensus 393 TtlfidSqvvkWni~ 407 (638)
T 3sbq_A 393 TTLFIDSQVVKWNME 407 (638)
T ss_dssp EEETTTTEEEEEEHH
T ss_pred eeeeecceEEEEecc
Confidence 677799999999864
No 346
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=59.38 E-value=69 Score=25.85 Aligned_cols=118 Identities=8% Similarity=-0.079 Sum_probs=62.0
Q ss_pred ceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEeccc---CCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEE
Q 019258 159 GFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNF---GSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFA 235 (343)
Q Consensus 159 ~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~i 235 (343)
.+.+++|+|...|.+. .+|.+.-.+..+ ... ....... +..+. ..-.++.|+|++. +.++ .||.|+-
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t---~~~-~~W~~s~t~IG~~Gw--~~F~a~~fD~~G~-LYav--~dG~iyr 111 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPT---HDN-DNWMGRAKKIGNGGW--NQFQFLFFDPNGY-LYAV--SKDKLYK 111 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCC---STT-CCHHHHCEEEECSCG--GGCSEEEECTTSC-EEEE--ETTEEEE
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCC---CCc-ccccccccEeccccc--ccceEEEECCCCC-EEEe--CCCEEEE
Confidence 5889999995555555 777655555433 111 1111111 00001 1147899999885 4444 6799988
Q ss_pred EEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 236 WDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
++--+...- .-+.. .+.+...-=..+..|.|.|++. |.... ||.++-....
T Consensus 112 ~~pP~~~~~-~Wl~~---a~~vg~~gw~~~~~lff~p~G~-----------Lyav~-dg~lyr~~~P 162 (236)
T 1tl2_A 112 ASPPQSDTD-NWIAR---ATEVGSGGWSGFKFLFFHPNGY-----------LYAVH-GQQFYKALPP 162 (236)
T ss_dssp ESCCCSTTC-CHHHH---SEEEECSSGGGEEEEEECTTSC-----------EEEEE-TTEEEEECCC
T ss_pred eCCCcCCCC-ceecc---ccEeccCCCCceEEEEECCCce-----------EEEEe-CCcEEecCCC
Confidence 874321110 00000 0000011125678999999875 66666 8887655443
No 347
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=56.24 E-value=1e+02 Score=26.78 Aligned_cols=235 Identities=15% Similarity=0.117 Sum_probs=118.5
Q ss_pred eeEEEccCCCeEEEEcCCCcEEEEEccCc--------eeeeeec-cCCccccCeEEEEec--CCEEEEEeCCCcEEEEEC
Q 019258 74 ISSLSTSHQSLVAASTLSGSLHVLSSAMQ--------VLLSVDE-NSGFHVGPISGVDLT--GSECVSVGEDGRVNLVSV 142 (343)
Q Consensus 74 v~~v~~~~~~~l~~~s~dg~v~v~~~~~~--------~~~~~~~-~~~~h~~~v~~~~~~--~~~~~s~s~dg~v~~wd~ 142 (343)
|..++. .....++-..||.|..|-.... +...... ........+..+++. ....+....||.|..|-.
T Consensus 55 i~~i~~-G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~ 133 (389)
T 3kci_A 55 PVQLIG-GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 133 (389)
T ss_dssp EEEEEE-ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEEC
T ss_pred eEEEEe-CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeC
Confidence 444443 3556666678999999965411 1111111 111122244555554 667778889999999965
Q ss_pred CC----------CceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccC-CC----CC---eeEEecccCCC
Q 019258 143 IG----------GGEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAG-SG----GP---VLQFKGNFGSQ 204 (343)
Q Consensus 143 ~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~-~~----~~---~~~~~~~~~~~ 204 (343)
.. ...............|..++... ...++-..+|.|..|-....+ .+ .. +..+.....
T Consensus 134 n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~-~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~-- 210 (389)
T 3kci_A 134 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG-AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-- 210 (389)
T ss_dssp CGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECS-SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTT--
T ss_pred CCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCc-CeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCC--
Confidence 32 00111122221222466666543 445556789999999753300 00 00 111111111
Q ss_pred CCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCc-----------eeeeeecCCCCcccccCCccccEEEEEEeec
Q 019258 205 GKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ-----------QSIVLSGVGTGEAVTHSLSESEVWEVQYDCH 273 (343)
Q Consensus 205 ~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 273 (343)
..|..++......+. ++-.+||.|+.|-..... .|..+. ......|..|+.-..
T Consensus 211 ----~~v~~ia~G~g~~~t-~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~----------~~~~~~v~~v~~G~~ 275 (389)
T 3kci_A 211 ----HRVVDIACGSGDAQT-LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID----------SLTGLGVVKVECGSQ 275 (389)
T ss_dssp ----SCEEEEEECCSSCEE-EEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECG----------GGTTSCEEEEEEETT
T ss_pred ----CeEEEEEEcCCCcEE-EEEccCCEEEEEeCCCCCCCCCCCCCCccccEEec----------ccCCCcEEEEeCCCC
Confidence 347777765422343 345789999999643211 122211 111224666655422
Q ss_pred CCCCcCCCCCccceEEEecCCeEEEEecCCCc------ccccccc--------cccceeeecCCCCCeeEEccCCceEEE
Q 019258 274 TKSSNISSSRVLPAMFCSEDGILAVVEQGEEP------FELLAEP--------CAINSFDIDPQNPSDVICSLEWESIAI 339 (343)
Q Consensus 274 ~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~------~~~~~~~--------~~i~s~~~~~~~~~~l~~~~~~~~i~~ 339 (343)
+.+.-..||.|+.|-.+..- ......| ..|.+++... ...++-.+++.+|.
T Consensus 276 ------------hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~---~h~~al~~~G~v~~ 340 (389)
T 3kci_A 276 ------------FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS---LHCVCCTEDGEVYT 340 (389)
T ss_dssp ------------EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECS---SEEEEEETTCCEEE
T ss_pred ------------EEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEecc---CeEEEECCCCCEEE
Confidence 45666899999999753211 0000011 2344555443 45555567788888
Q ss_pred EeC
Q 019258 340 VSR 342 (343)
Q Consensus 340 ~~~ 342 (343)
|-.
T Consensus 341 wG~ 343 (389)
T 3kci_A 341 WGD 343 (389)
T ss_dssp EEC
T ss_pred eeC
Confidence 853
No 348
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=55.21 E-value=1e+02 Score=26.66 Aligned_cols=192 Identities=12% Similarity=0.075 Sum_probs=92.2
Q ss_pred CCeEEEEcCCCcEEEEEccCc--------eeeeeec-cCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCC-------
Q 019258 82 QSLVAASTLSGSLHVLSSAMQ--------VLLSVDE-NSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGG------- 145 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~--------~~~~~~~-~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~------- 145 (343)
.+.++.-..||+|..|-.+.. ....... ........+..++......+....||.|..|-....
T Consensus 10 ~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~ 89 (389)
T 3kci_A 10 GRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGG 89 (389)
T ss_dssp -----------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSS
T ss_pred cccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCC
Confidence 455666677888888855421 1111110 000011245556555777778889999999965321
Q ss_pred ---ceEEEEEcCCCccceEEEEeCC-CCEEEEEeCCCcEEEEEccccCC-C----CC---eeEEecccCCCCCcccCeEE
Q 019258 146 ---GEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGFGYGLQWWDLRRAGS-G----GP---VLQFKGNFGSQGKASGMIHS 213 (343)
Q Consensus 146 ---~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~d~~i~iwd~~~~~~-~----~~---~~~~~~~~~~~~~~~~~i~~ 213 (343)
..............+..++... ....+.-..||.|..|-....+. + .. +..+..... ..|..
T Consensus 90 ~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~------~~i~~ 163 (389)
T 3kci_A 90 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG------IEVVD 163 (389)
T ss_dssp SCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTT------SCEEE
T ss_pred cCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCC------CeEEE
Confidence 0111222222222455566655 56677778899999996533000 0 01 111111110 34777
Q ss_pred EEEcCCCCeEEEEEecCCcEEEEEccCCc-----------eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCC
Q 019258 214 VDIHPSRKHTCLAGGSSGTVFAWDLRWQQ-----------QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSS 282 (343)
Q Consensus 214 v~~~p~~~~~~~sg~~dg~v~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~ 282 (343)
|+... .+. ++-.+||.|+.|-..... .|..+. ......|..++.-....
T Consensus 164 va~G~--~hs-~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~----------~~~~~~v~~ia~G~g~~------- 223 (389)
T 3kci_A 164 VAAGG--AHS-ACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE----------ALQGHRVVDIACGSGDA------- 223 (389)
T ss_dssp EEECS--SEE-EEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECG----------GGTTSCEEEEEECCSSC-------
T ss_pred EEeCc--CeE-EEEeCCCeEEEeCCCCCCCcCCCCCcccccceEec----------ccCCCeEEEEEEcCCCc-------
Confidence 77654 343 345789999999653211 111111 11123455665532222
Q ss_pred CccceEEEecCCeEEEEecC
Q 019258 283 RVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 283 ~~~~l~s~s~dg~i~~~~~~ 302 (343)
+.+.-..||.|+.|-.+
T Consensus 224 ---~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 224 ---QTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp ---EEEEEETTTEEEEEECC
T ss_pred ---EEEEEccCCEEEEEeCC
Confidence 46677899999999653
No 349
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=52.37 E-value=1.2e+02 Score=26.30 Aligned_cols=100 Identities=11% Similarity=0.135 Sum_probs=63.7
Q ss_pred CCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc---
Q 019258 82 QSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL--- 157 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~--- 157 (343)
...++.-. ...+.+|+++..+.+.... -..+|.-..|- .+.++-.... .|.-|+++....+.++++.|..
T Consensus 78 ~~ViALra-g~~LQiFnletK~klks~~----~~e~VvfWkWis~~~L~lVT~t-aVyHWs~~~~s~P~kvFdR~~~L~~ 151 (365)
T 2xzh_A 78 SKVIALKA-GKTLQIFNIEMKSKMKAHT----MTDDVTFWKWISLNTVALVTDN-AVYHWSMEGESQPVKMFDRHSSLAG 151 (365)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEEEEE----CSSCEEEEEECSSSEEEEEESS-EEEEEESSTTCCCEEEEECCGGGTT
T ss_pred ccEEEEec-CCeEEEechHHhhhhccee----cCCccEEEEecCCCeEEEEcCC-cEEEEcccCCCCCceeeecchhccc
Confidence 34444443 6789999999766554433 23478888887 7777766655 5999999876568888876643
Q ss_pred cceEEEEeCC-CCEEEEEeC-------CCcEEEEEccc
Q 019258 158 VGFNCVKWAS-PTEFVTGGF-------GYGLQWWDLRR 187 (343)
Q Consensus 158 ~~v~~~~~~~-~~~l~t~~~-------d~~i~iwd~~~ 187 (343)
+.|..-..++ .+.++..|- .|.+.+|..+.
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er 189 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 189 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc
Confidence 2344444455 443333222 46777887754
No 350
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=51.79 E-value=1.1e+02 Score=26.03 Aligned_cols=102 Identities=11% Similarity=0.033 Sum_probs=52.2
Q ss_pred CeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-C----CEEEEEeC-C-----CcEEEE
Q 019258 73 RISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-G----SECVSVGE-D-----GRVNLV 140 (343)
Q Consensus 73 ~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~----~~~~s~s~-d-----g~v~~w 140 (343)
....|+|. ++. |+++..+|.|++++-...+.+.-.............++++ + ..+..+.. . +.|..+
T Consensus 32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp CEEEEEECTTSC-EEEEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred CceEEEEcCCCe-EEEEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 45688998 555 5555667999988821111111111111123457888888 3 35544332 2 567778
Q ss_pred ECCCCc-----eEEEEEc--CCCccceEEEEeCC-CCEEEEEe
Q 019258 141 SVIGGG-----EFKRVYD--GNGLVGFNCVKWAS-PTEFVTGG 175 (343)
Q Consensus 141 d~~~~~-----~~~~~~~--~~~~~~v~~~~~~~-~~~l~t~~ 175 (343)
+..... .+...+. .........+.|.+ +..+++.+
T Consensus 111 ~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 111 RHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 776431 1111122 11111246788888 65555544
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=50.65 E-value=1.7e+02 Score=27.85 Aligned_cols=225 Identities=12% Similarity=0.083 Sum_probs=119.2
Q ss_pred CCeeEEEccCCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEE
Q 019258 72 TRISSLSTSHQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 72 ~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~ 151 (343)
..|.++.......|..|+.+| +..||..... +.... ......|.++......+..++.+ .|..+|..+++ ....
T Consensus 63 ~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~-f~~~~--~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~-~~~~ 136 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGTDNG-ILVYNYRADR-YEQPE--TDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRK-LTSF 136 (758)
T ss_dssp SCEEEEEEETTTEEEEEETTE-EEEEETTTTE-ECCCS--CCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCC-EEEE
T ss_pred ceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCE-EECcc--cCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCe-EEEe
Confidence 457777655566777787776 7788876432 21111 11223566665455556666666 58888987653 3333
Q ss_pred Ec---CCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEcCCCCeEEEEEe
Q 019258 152 YD---GNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIHPSRKHTCLAGG 228 (343)
Q Consensus 152 ~~---~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~p~~~~~~~sg~ 228 (343)
.. ......|.++.....+.+-.++.+ .|..+|... .....+..... .......|.++...+++..+. .|+
T Consensus 137 ~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~----~~~~~~~~~~~-~~~~~~~i~~i~~d~~~~~lW-igt 209 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSN----GKFEGIPLPVH-SSQSNLFVNSLLEDTTRQCVW-IGT 209 (758)
T ss_dssp CHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTT----TEEEEECCCCC-TTCSSCCEEEEEEETTTTEEE-EEE
T ss_pred ccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCC----CceEEecCCCc-cccccceeEEEEEECCCCEEE-EEE
Confidence 11 111225888877764445556654 577788655 22222221110 001113488888877655433 355
Q ss_pred cCCcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcccc
Q 019258 229 SSGTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFEL 308 (343)
Q Consensus 229 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~ 308 (343)
. +-+..+|..+... ..+. ......|.++...+++ .|+.++. +-|.+++........
T Consensus 210 ~-~Gl~~~~~~~~~~-~~~~----------~l~~~~i~~i~~d~~g-----------~lWigT~-~Gl~~~~~~~~~~~~ 265 (758)
T 3ott_A 210 E-GYLFQYFPSTGQI-KQTE----------AFHNNSIKSLALDGNG-----------DLLAGTD-NGLYVYHNDTTPLQH 265 (758)
T ss_dssp E-EEEEEEETTTTEE-EEEE----------EEEEEEEEEEEECTTC-----------CEEEEET-TEEEEECCTTSCCEE
T ss_pred C-CCCeEEcCCCCeE-Eecc----------CCCCCeEEEEEEcCCC-----------CEEEEeC-CceeEEecCCCcEEE
Confidence 4 4588888765332 1111 1123457788776554 4666664 457777765433222
Q ss_pred cc-c--------ccccceeeecCCCCCeeEEccCCc
Q 019258 309 LA-E--------PCAINSFDIDPQNPSDVICSLEWE 335 (343)
Q Consensus 309 ~~-~--------~~~i~s~~~~~~~~~~l~~~~~~~ 335 (343)
+. . ...|.++-.+. .|. |=.|++.|
T Consensus 266 ~~~~~~~~~~l~~~~i~~i~~D~-~g~-lWiGT~~G 299 (758)
T 3ott_A 266 IIHDSRNIQSLTNNIIWNIFADQ-EHN-IWLGTDYG 299 (758)
T ss_dssp ECCCTTCTTSCSCSCEEEEEECT-TCC-EEEEESSS
T ss_pred EEcCCCCcCcCCcCeEEEEEEcC-CCC-EEEEeCCc
Confidence 21 1 13477777775 333 33444444
No 352
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=45.44 E-value=1.5e+02 Score=25.76 Aligned_cols=233 Identities=14% Similarity=0.045 Sum_probs=119.3
Q ss_pred CeeEEEccCCCeEEEEcCCCcEEEEEccCc--------ee-eeeeccCCccccCeEEEEecCCEEEEEeCCCcEEEEECC
Q 019258 73 RISSLSTSHQSLVAASTLSGSLHVLSSAMQ--------VL-LSVDENSGFHVGPISGVDLTGSECVSVGEDGRVNLVSVI 143 (343)
Q Consensus 73 ~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~--------~~-~~~~~~~~~h~~~v~~~~~~~~~~~s~s~dg~v~~wd~~ 143 (343)
.|..++......++....++.|..|-.... .. .............|..++......+....||.|..|-..
T Consensus 69 ~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n 148 (406)
T 4d9s_A 69 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 148 (406)
T ss_dssp CEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred CEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCC
Confidence 577776653334444444569999965311 01 111111111223677777767777888899999999754
Q ss_pred CC----------ceEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCC----------eeEEecccCC
Q 019258 144 GG----------GEFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGP----------VLQFKGNFGS 203 (343)
Q Consensus 144 ~~----------~~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~ 203 (343)
.. ..............|..++... ...++-..+|.|..|-... .++. +..+....
T Consensus 149 ~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~-~hs~alt~~G~v~~wG~n~--~GqlG~g~~~~~~~p~~v~~~~-- 223 (406)
T 4d9s_A 149 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA-EHTAAVTEDGDLYGWGWGR--YGNLGLGDRTDRLVPERVTSTG-- 223 (406)
T ss_dssp TTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECS-SEEEEEETTSCEEEEECCT--TSTTCSSSSCCEEEEEECCCST--
T ss_pred CCccCCCCCCCCcccceEecccCCCcEEEEecCC-CeEEEEeCCCCEEEeeCCC--CCCCCCCCCCCcCccEEecccC--
Confidence 31 0111112221222466666543 4455567899999997543 1110 01111111
Q ss_pred CCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCc-----------eeeeeecCCCCcccccCCccccEEEEEEee
Q 019258 204 QGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ-----------QSIVLSGVGTGEAVTHSLSESEVWEVQYDC 272 (343)
Q Consensus 204 ~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 272 (343)
...|..|+... .+.+ +-..||.|+.|-..... .|..+. ......|..|+--
T Consensus 224 ----~~~i~~va~G~--~ht~-~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~----------~~~~~~v~~i~~G- 285 (406)
T 4d9s_A 224 ----GEKMSMVACGW--RHTI-SVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLE----------ALSNSFISQISGG- 285 (406)
T ss_dssp ----TCCEEEEEECS--SEEE-EEETTCCEEEEECCTTSTTCSSSCCCEEEEEECG----------GGTTSCEEEEEEC-
T ss_pred ----CceEEEEEECC--CcEE-EEcCCCCEEEeeCCCCCCCCCCCCcCccccEEec----------ccCCCCEEEEEec-
Confidence 13466666654 2333 44789999999753211 111111 1112235555443
Q ss_pred cCCCCcCCCCCccceEEEecCCeEEEEecCCCc-c------------cc-cccccccceeeecCCCCCeeEEccCCceEE
Q 019258 273 HTKSSNISSSRVLPAMFCSEDGILAVVEQGEEP-F------------EL-LAEPCAINSFDIDPQNPSDVICSLEWESIA 338 (343)
Q Consensus 273 ~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-~------------~~-~~~~~~i~s~~~~~~~~~~l~~~~~~~~i~ 338 (343)
.. +.+.-..||.|+.|-.+..- . .+ ......|.+++.-. ...++-.+++.+|
T Consensus 286 --~~---------hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~---~hs~alt~~G~v~ 351 (406)
T 4d9s_A 286 --WR---------HTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGW---RHTLAVTERNNVF 351 (406)
T ss_dssp --SS---------EEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECS---SEEEEEETTSCEE
T ss_pred --CC---------EEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCC---CeEEEEeCCCCEE
Confidence 22 45666799999999653211 0 00 00112355555443 4555556778888
Q ss_pred EEeC
Q 019258 339 IVSR 342 (343)
Q Consensus 339 ~~~~ 342 (343)
.|-+
T Consensus 352 ~wG~ 355 (406)
T 4d9s_A 352 AWGR 355 (406)
T ss_dssp EEEC
T ss_pred EecC
Confidence 8753
No 353
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=44.72 E-value=1.5e+02 Score=25.44 Aligned_cols=76 Identities=8% Similarity=0.007 Sum_probs=43.1
Q ss_pred ceEEEEeCCCCEEEEEeC-CCcEEEEEccccCCCCCeeEEeccc--CCCCCcccCeEEEEEcCC---CCeEEEEE--ecC
Q 019258 159 GFNCVKWASPTEFVTGGF-GYGLQWWDLRRAGSGGPVLQFKGNF--GSQGKASGMIHSVDIHPS---RKHTCLAG--GSS 230 (343)
Q Consensus 159 ~v~~~~~~~~~~l~t~~~-d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~v~~~p~---~~~~~~sg--~~d 230 (343)
....++|.|...++.+.. .|.|++++... +.. ..+.... ...+. .....|+++|+ ...++++- ..+
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~---g~~-~~v~~~~~v~~~g~--~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKT---GRK-TELGEVPGVSPSGE--GGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTT---CCE-EEEEECTTCCCBTT--BSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCC---CcE-eeecccCceeecCC--CCceeeEeccccccCCEEEEEEecCCC
Confidence 478999999434554555 89999987644 221 2221110 00111 55899999995 34455432 245
Q ss_pred CcEEEEEccC
Q 019258 231 GTVFAWDLRW 240 (343)
Q Consensus 231 g~v~iwd~~~ 240 (343)
..|.-|.+..
T Consensus 107 ~~v~R~~~~~ 116 (347)
T 3das_A 107 NRIVRMLYDE 116 (347)
T ss_dssp EEEEEEEBCT
T ss_pred CEEEEEEeCC
Confidence 5677776543
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=40.50 E-value=52 Score=31.57 Aligned_cols=35 Identities=9% Similarity=0.035 Sum_probs=27.4
Q ss_pred CeEEEEecCCEEEEEeCCCcEEEEECCCCceEEEEE
Q 019258 117 PISGVDLTGSECVSVGEDGRVNLVSVIGGGEFKRVY 152 (343)
Q Consensus 117 ~v~~~~~~~~~~~s~s~dg~v~~wd~~~~~~~~~~~ 152 (343)
.|.++.+....+++.+.|+++|+|++.+++ +....
T Consensus 223 ~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~-lv~t~ 257 (729)
T 3f7f_A 223 VISCKLFHERYLIVLTQNCHLKIWDLTSFT-LIQDY 257 (729)
T ss_dssp EEEEEEETTTEEEEEETTCEEEEEETTTTE-EEEEE
T ss_pred eEEEeccCCcEEEEEEcCCeEEEEEcCCCc-eEEee
Confidence 356666668899999999999999999984 44443
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=38.46 E-value=2.1e+02 Score=25.70 Aligned_cols=62 Identities=6% Similarity=-0.121 Sum_probs=34.9
Q ss_pred cCeEEEEEcCCCC-eEEEEEecCCcEEEEEccCCceeeeeecCCCCccccc---CCccccEEEEEEeec
Q 019258 209 GMIHSVDIHPSRK-HTCLAGGSSGTVFAWDLRWQQQSIVLSGVGTGEAVTH---SLSESEVWEVQYDCH 273 (343)
Q Consensus 209 ~~i~~v~~~p~~~-~~~~sg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~v~~~p~ 273 (343)
..-..|+|.|++. .++ .+...|.|++++.........+..+. ..+.. ...+.....|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~-V~er~G~i~~~~~~g~~~~~~~~~~~--~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLF-ILEKEGYVKILTPEGEIFKEPYLDIH--KLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEE-EEETTTEEEEECTTSCBCSSCSEECT--TTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEE-EEeCCceEEEEeCCCCeeeeeecCCc--ceeccCccccCCCcceeeEeCCC
Confidence 3467899999985 354 45778999999753211111111100 00000 012567899999996
No 356
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=36.53 E-value=2.4e+02 Score=25.45 Aligned_cols=193 Identities=9% Similarity=0.080 Sum_probs=102.3
Q ss_pred CCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-CCEEEEEeCCCcEEEEECCCCceEEEEEcCCCc---
Q 019258 82 QSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-GSECVSVGEDGRVNLVSVIGGGEFKRVYDGNGL--- 157 (343)
Q Consensus 82 ~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~s~s~dg~v~~wd~~~~~~~~~~~~~~~~--- 157 (343)
...++.-. ..++.||+++..+.+.... ...+|.-..|- .+.++-.... .|.-|+++....+.++++.|..
T Consensus 77 ~~iiALra-g~~lQiFnle~K~klks~~----~~e~VvfWkWis~~~l~lVT~t-aVyHWsi~~~s~P~kvFdR~~~L~~ 150 (494)
T 1bpo_A 77 SKVIALKA-GKTLQIFNIEMKSKMKAHT----MTDDVTFWKWISLNTVALVTDN-AVYHWSMEGESQPVKMFDRHSSLAG 150 (494)
T ss_dssp SSCEEEEE-TTEEEEEETTTTEEEEEEE----CSSCCCEEEEEETTEEEEECSS-EEEEEESSSSCCCEEEEECCGGGTT
T ss_pred CcEEEEec-CCeEEEEchHHhhhhccee----cCCCceEEEecCCCeEEEEcCC-eeEEecccCCCCchhheecchhccc
Confidence 34444443 7789999998666554432 22467777887 7777766654 6999999875567888776643
Q ss_pred cceEEEEeCC-CCEEEEEeC-------CCcEEEEEccccCCCCCeeEEecccCCCCCcccCeEEEEEc--CCCCeEEEEE
Q 019258 158 VGFNCVKWAS-PTEFVTGGF-------GYGLQWWDLRRAGSGGPVLQFKGNFGSQGKASGMIHSVDIH--PSRKHTCLAG 227 (343)
Q Consensus 158 ~~v~~~~~~~-~~~l~t~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~--p~~~~~~~sg 227 (343)
+.|..-..++ ...++..|- .|.+.+|..+. +.-..+++|. +....+... +....++.-+
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----~~sQ~ieGha-------a~F~~~~~~g~~~~~~lf~fa 219 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----KVSQPIEGHA-------ASFAQFKMEGNAEESTLFCFA 219 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT----CCEEEECCSE-------EEEEEEECTTCSSEEEEEEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc----cccchheeee-------eeeEEEecCCCCCCceEEEEE
Confidence 2344444455 444332221 46788888755 3333455543 222222222 1112344333
Q ss_pred ec---CCcEEEEEccCCc---eeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEec
Q 019258 228 GS---SGTVFAWDLRWQQ---QSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQ 301 (343)
Q Consensus 228 ~~---dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~ 301 (343)
.. .+++.+-++..+. .+....... -.++...-.+---+++.++... .++--+.-|.|.++|.
T Consensus 220 ~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vd--v~fppe~~~DFPvamqvs~kyg----------viyviTK~G~i~lyDl 287 (494)
T 1bpo_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVD--VFFPPEAQNDFPVAMQISEKHD----------VVFLITKYGYIHLYDL 287 (494)
T ss_dssp ECSTTCCEEEEEECSCCCTTCCCCCCEEEE--CCCCTTSTTCCEEEEEEETTTT----------EEEEEETTSEEEEEET
T ss_pred EecCCCcEEEEEEcCCCccCCCCccceeee--eeCCcccccCceeEEEecccCC----------EEEEEecCceEEEEec
Confidence 33 2678888875431 011000000 0000011122234566665544 5666677888888876
Q ss_pred CC
Q 019258 302 GE 303 (343)
Q Consensus 302 ~~ 303 (343)
..
T Consensus 288 eT 289 (494)
T 1bpo_A 288 ET 289 (494)
T ss_dssp TT
T ss_pred cc
Confidence 44
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=36.15 E-value=1.9e+02 Score=28.79 Aligned_cols=34 Identities=9% Similarity=0.026 Sum_probs=25.3
Q ss_pred CeEEEEec--CCEEEEEeCCCcEEEEECCCCceEEEE
Q 019258 117 PISGVDLT--GSECVSVGEDGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 117 ~v~~~~~~--~~~~~s~s~dg~v~~wd~~~~~~~~~~ 151 (343)
.+.++... ...+++.+.|+++|+|++.+++ +...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~-~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ-CVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE-EEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC-eEee
Confidence 34555544 5688899999999999999985 4433
No 358
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=28.51 E-value=3.4e+02 Score=25.88 Aligned_cols=68 Identities=10% Similarity=0.120 Sum_probs=37.0
Q ss_pred cEEEEEEeecCCCCcCCCCCccceEEEec------CCeEEEEecCCCcccccccc-cccceeeecCCCCCeeEEccCCce
Q 019258 264 EVWEVQYDCHTKSSNISSSRVLPAMFCSE------DGILAVVEQGEEPFELLAEP-CAINSFDIDPQNPSDVICSLEWES 336 (343)
Q Consensus 264 ~v~~v~~~p~~~~~~~~~~~~~~l~s~s~------dg~i~~~~~~~~~~~~~~~~-~~i~s~~~~~~~~~~l~~~~~~~~ 336 (343)
.++.|+.+|.++. .++.++. .+.|+.-.-..+..+....+ .+...+.++|.++..|++++..+.
T Consensus 91 ~~~~IavdP~dp~---------~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~p~~~~~~l~~~P~~~~~l~a~~~~~g 161 (685)
T 3f6k_A 91 TEFGMAIGPENSG---------KVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENG 161 (685)
T ss_dssp GGGCEEECSTTCC---------CEEEEECCCTTCSSCEEEEESSTTSSCEEEECSSCBSSCCEEETTEEEEEEEEBTTCC
T ss_pred ceeEEEECCCCCC---------EEEEEEeccCCCCCceEEEECCCCceeEeccCCCCCceEEEEecCCCCEEEEEECCCC
Confidence 3468899998764 4444443 45555432222221111112 222478888876677777765666
Q ss_pred EEEE
Q 019258 337 IAIV 340 (343)
Q Consensus 337 i~~~ 340 (343)
++..
T Consensus 162 ly~S 165 (685)
T 3f6k_A 162 LWVS 165 (685)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 359
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=28.39 E-value=4e+02 Score=25.53 Aligned_cols=167 Identities=9% Similarity=-0.037 Sum_probs=74.5
Q ss_pred ceEEEEeCC--CCEEEEEeCCCcEEEEEccccCCCCCeeEEeccc-----CCCCCcccCeEEEEEcCCCCeEEEEEecC-
Q 019258 159 GFNCVKWAS--PTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNF-----GSQGKASGMIHSVDIHPSRKHTCLAGGSS- 230 (343)
Q Consensus 159 ~v~~~~~~~--~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~v~~~p~~~~~~~sg~~d- 230 (343)
.|.++.++| .+.+..+...+.|...+ . .++....+.... .........+.+++++|..+..+.++..+
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~--D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~ 97 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWN--A--AKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDY 97 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEE--T--TTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSC
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEEC--C--CCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccc
Confidence 599999999 46677777666554332 2 233333322100 00000114489999998543333333321
Q ss_pred ----CcEEEEEccCCceeeeeecCCCCcccccCCccccEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCcc
Q 019258 231 ----GTVFAWDLRWQQQSIVLSGVGTGEAVTHSLSESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPF 306 (343)
Q Consensus 231 ----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~ 306 (343)
....||--.....-............. .........|+++|.++. .++.+..++.|+.=.-.-+.-
T Consensus 98 ~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~-~~g~~~~~~l~v~p~~~~---------~v~a~~~~~~l~~S~DgG~TW 167 (763)
T 3a0f_A 98 VQWDPWAAFLVSDDRGKTFKQYRSPVPMGAN-DMGRNGGERLAVNPHWTD---------ELWFGSRTQGLWRSTDRAQTW 167 (763)
T ss_dssp TTTCSCCEEEEESSTTSSCEEEECSSCCCTT-STTTTSBCCEEECTTSTT---------CEEEECSSSCEEEESSTTSSC
T ss_pred ccCCCCceEEEECCCCCCceeccCCcccCcc-ccCccccceEEECCCCCC---------EEEEEeCCCcEEEECCCCcCc
Confidence 112334222222222211100000000 000111246888887665 666666666555421111111
Q ss_pred cc---ccc----ccccceeeecCCCCCeeEEccCCc-eEEE
Q 019258 307 EL---LAE----PCAINSFDIDPQNPSDVICSLEWE-SIAI 339 (343)
Q Consensus 307 ~~---~~~----~~~i~s~~~~~~~~~~l~~~~~~~-~i~~ 339 (343)
+. +.. ...+..+.++|.++..+..+...+ .|+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~ 208 (763)
T 3a0f_A 168 SRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWV 208 (763)
T ss_dssp EECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEE
T ss_pred cccccCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEE
Confidence 11 111 123667788876555566665554 3554
No 360
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=27.86 E-value=3.3e+02 Score=24.35 Aligned_cols=69 Identities=9% Similarity=-0.064 Sum_probs=37.4
Q ss_pred ceEEEEeCCCC--EEEEEeCCCcEEEEEccccCCCCCeeEEecccCCCC---CcccCeEEEEEcCC---CCeEEEEEe
Q 019258 159 GFNCVKWASPT--EFVTGGFGYGLQWWDLRRAGSGGPVLQFKGNFGSQG---KASGMIHSVDIHPS---RKHTCLAGG 228 (343)
Q Consensus 159 ~v~~~~~~~~~--~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~v~~~p~---~~~~~~sg~ 228 (343)
....|+|.|.. +++.+...|.|++++........++..+..... .+ ....-...|+++|+ ...++++-+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~-~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQ-SGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBC-CCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceec-cCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 47789999933 477777899999997532000123332221110 00 00145789999996 234555433
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=27.64 E-value=1.8e+02 Score=29.70 Aligned_cols=26 Identities=8% Similarity=0.018 Sum_probs=21.6
Q ss_pred CCEEEEEeCCCcEEEEECCCCceEEEE
Q 019258 125 GSECVSVGEDGRVNLVSVIGGGEFKRV 151 (343)
Q Consensus 125 ~~~~~s~s~dg~v~~wd~~~~~~~~~~ 151 (343)
...+++.+.|+++|+|++.+++ +...
T Consensus 249 ~~~lftL~~D~~LRiWsl~t~~-~v~t 274 (1139)
T 4fhn_B 249 YNVLVMLSLDYKLKVLDLSTNQ-CVET 274 (1139)
T ss_dssp TTEEEEEBTTCEEEEEETTTTE-EEEE
T ss_pred ccEEEEEeCCCEEEEEECCCCC-eEEe
Confidence 5788899999999999999985 4443
No 362
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=26.40 E-value=3e+02 Score=23.36 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=51.8
Q ss_pred CeeEEEcc-CCCeEEEEcCCCcEEEEEccCceeeeeeccCCccccCeEEEEec-C----CEEEEEeC----C----CcEE
Q 019258 73 RISSLSTS-HQSLVAASTLSGSLHVLSSAMQVLLSVDENSGFHVGPISGVDLT-G----SECVSVGE----D----GRVN 138 (343)
Q Consensus 73 ~v~~v~~~-~~~~l~~~s~dg~v~v~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~----~~~~s~s~----d----g~v~ 138 (343)
....|+|. ++. |+++..+|.|++++....+.+.-.............+++. . ..|..+.. + ..|.
T Consensus 30 ~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGR-YLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTE-EEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCe-EEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 45788888 554 6666667999888633211121111111123457888887 3 45544332 3 5677
Q ss_pred EEECCCC--c----e-EEEEEcCCCccceEEEEeCC-CCEEEEEe
Q 019258 139 LVSVIGG--G----E-FKRVYDGNGLVGFNCVKWAS-PTEFVTGG 175 (343)
Q Consensus 139 ~wd~~~~--~----~-~~~~~~~~~~~~v~~~~~~~-~~~l~t~~ 175 (343)
.++.... . + +...+.....-....+.|.| +.++++.+
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 7776543 1 1 11111111111245688888 65555544
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=25.74 E-value=82 Score=30.21 Aligned_cols=36 Identities=14% Similarity=0.248 Sum_probs=27.2
Q ss_pred eEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCCeeEEec
Q 019258 160 FNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGPVLQFKG 199 (343)
Q Consensus 160 v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~ 199 (343)
|.++.+. ...+++-+.|+++|+|++++ ++.+.....
T Consensus 224 Is~~~~~-~~fLftL~~Dh~LRiWsL~t---~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLFH-ERYLIVLTQNCHLKIWDLTS---FTLIQDYDM 259 (729)
T ss_dssp EEEEEET-TTEEEEEETTCEEEEEETTT---TEEEEEEET
T ss_pred EEEeccC-CcEEEEEEcCCeEEEEEcCC---CceEEeecc
Confidence 5554443 67899999999999999998 666665443
No 364
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=24.52 E-value=1.9e+02 Score=27.73 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=38.8
Q ss_pred cEEEEEEeecCCCCcCCCCCccceEEEecCCeEEEEecCCCccccccc--------ccccceeeecCCCCCeeEEcc
Q 019258 264 EVWEVQYDCHTKSSNISSSRVLPAMFCSEDGILAVVEQGEEPFELLAE--------PCAINSFDIDPQNPSDVICSL 332 (343)
Q Consensus 264 ~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~--------~~~i~s~~~~~~~~~~l~~~~ 332 (343)
.|..|+++|.++. .++.+...|.|+..+.....-+.+.. ...|.++.++|.+.+.|..+.
T Consensus 24 ~i~~i~~~p~~~~---------~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEKD---------LIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSSTT---------CEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCCC---------EEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 7889999999876 77888877887765433222111111 245889999986555555543
No 365
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=23.24 E-value=3.6e+02 Score=23.28 Aligned_cols=195 Identities=13% Similarity=0.039 Sum_probs=102.6
Q ss_pred CCeeEEEccCCCeEEEEcCCCcEEEEEccCc-e-------e-eeeeccCCccccCeEEEEecCCEEEEEeCC-CcEEEEE
Q 019258 72 TRISSLSTSHQSLVAASTLSGSLHVLSSAMQ-V-------L-LSVDENSGFHVGPISGVDLTGSECVSVGED-GRVNLVS 141 (343)
Q Consensus 72 ~~v~~v~~~~~~~l~~~s~dg~v~v~~~~~~-~-------~-~~~~~~~~~h~~~v~~~~~~~~~~~s~s~d-g~v~~wd 141 (343)
..|..++.. ..+.++-..||.|..|-.... + . .............|..++.-....+....| +.|..|-
T Consensus 16 ~~v~~ia~G-~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG 94 (406)
T 4d9s_A 16 RKVLIISAG-ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWG 94 (406)
T ss_dssp CCEEEEEEC-SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEE
T ss_pred cceEEEecC-CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEc
Confidence 467777665 455666678999999965421 0 0 011111111223677777665565555665 4899996
Q ss_pred CCCC---------c--eEEEEEcCCCccceEEEEeCCCCEEEEEeCCCcEEEEEccccCCCCC----------eeEEecc
Q 019258 142 VIGG---------G--EFKRVYDGNGLVGFNCVKWASPTEFVTGGFGYGLQWWDLRRAGSGGP----------VLQFKGN 200 (343)
Q Consensus 142 ~~~~---------~--~~~~~~~~~~~~~v~~~~~~~~~~l~t~~~d~~i~iwd~~~~~~~~~----------~~~~~~~ 200 (343)
.... . .+..+ .......|..++... ...++-..+|.|..|-... .++. +..+...
T Consensus 95 ~n~~GqLG~g~~~~~~~p~~v-~~l~~~~i~~ia~G~-~h~~alt~~G~v~~wG~n~--~GqLG~g~~~~~~~p~~v~~~ 170 (406)
T 4d9s_A 95 WGDFGRLGHGNSSDLFTPLPI-KALHGIRIKQIACGD-SHCLAVTMEGEVQSWGRNQ--NGQLGLGDTEDSLVPQKIQAF 170 (406)
T ss_dssp CCGGGTTCSSSCCCEEEEEEC-GGGTTCCEEEEEECS-SEEEEEETTSCEEEEECCT--TSTTCSSSCCCEEEEEECGGG
T ss_pred CCCCcCCCCCCCCccccceEe-cccCCCCEEEEEECh-hheEEEcCCCcEEEeCCCC--CccCCCCCCCCcccceEeccc
Confidence 4321 0 11111 111222477776543 4455667899999997543 1110 1111111
Q ss_pred cCCCCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccCCc-----------eeeeeecCCCCcccccCCccccEEEEE
Q 019258 201 FGSQGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRWQQ-----------QSIVLSGVGTGEAVTHSLSESEVWEVQ 269 (343)
Q Consensus 201 ~~~~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~h~~~v~~v~ 269 (343)
.. ..|..|+... .+. ++-.+||.|+.|-..... .|..+. ......|..|+
T Consensus 171 ~~------~~i~~va~G~--~hs-~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~----------~~~~~~i~~va 231 (406)
T 4d9s_A 171 EG------IRIKMVAAGA--EHT-AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVT----------STGGEKMSMVA 231 (406)
T ss_dssp TT------CCEEEEEECS--SEE-EEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECC----------CSTTCCEEEEE
T ss_pred CC------CcEEEEecCC--CeE-EEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEec----------ccCCceEEEEE
Confidence 10 3477777654 233 345789999999643211 111111 11123455555
Q ss_pred EeecCCCCcCCCCCccceEEEecCCeEEEEecC
Q 019258 270 YDCHTKSSNISSSRVLPAMFCSEDGILAVVEQG 302 (343)
Q Consensus 270 ~~p~~~~~~~~~~~~~~l~s~s~dg~i~~~~~~ 302 (343)
.-. . +.+.-..||.|+.|-.+
T Consensus 232 ~G~---~---------ht~~l~~~G~v~~wG~n 252 (406)
T 4d9s_A 232 CGW---R---------HTISVSYSGALYTYGWS 252 (406)
T ss_dssp ECS---S---------EEEEEETTCCEEEEECC
T ss_pred ECC---C---------cEEEEcCCCCEEEeeCC
Confidence 432 2 55677889999999653
No 366
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=22.51 E-value=4.8e+02 Score=24.41 Aligned_cols=98 Identities=11% Similarity=0.076 Sum_probs=57.2
Q ss_pred cEEEEECCC----CceEEEEEcCCCccceEEEEeCC-CCEEEEEeC-CCcEEEEEccccC---CCCC--eeE-EecccCC
Q 019258 136 RVNLVSVIG----GGEFKRVYDGNGLVGFNCVKWAS-PTEFVTGGF-GYGLQWWDLRRAG---SGGP--VLQ-FKGNFGS 203 (343)
Q Consensus 136 ~v~~wd~~~----~~~~~~~~~~~~~~~v~~~~~~~-~~~l~t~~~-d~~i~iwd~~~~~---~~~~--~~~-~~~~~~~ 203 (343)
.|.+.|.+. +......+.-.. ....+..+| +.+++.++. +.++.++|++.-. ..+. ... +...- +
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pk--sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e 375 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPK--NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-E 375 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESS--SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-B
T ss_pred CeeEEccccccccCCceEEEEeCCC--CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-c
Confidence 478888866 323333333333 366778889 655555554 9999999997400 0010 000 00000 0
Q ss_pred CCCcccCeEEEEEcCCCCeEEEEEecCCcEEEEEccC
Q 019258 204 QGKASGMIHSVDIHPSRKHTCLAGGSSGTVFAWDLRW 240 (343)
Q Consensus 204 ~~~~~~~i~~v~~~p~~~~~~~sg~~dg~v~iwd~~~ 240 (343)
-+. + -.-.+|+++| +.+.+-.-|..|.-|++..
T Consensus 376 ~Gl--G-PlHt~Fd~~G-~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 376 LGL--G-PLHTTFDGRG-NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CCS--C-EEEEEECSSS-EEEEEETTTTEEEEEEHHH
T ss_pred CCC--c-ccEEEECCCC-ceEeeeeecceEEEEeccH
Confidence 111 3 3456899988 6667777899999999865
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=21.91 E-value=3.9e+02 Score=23.19 Aligned_cols=152 Identities=11% Similarity=0.156 Sum_probs=73.3
Q ss_pred cEEEEEccccCCC--CCeeEEecccCCCCCcccCeEEEEEc---CC----CCeEEEEEecCCcEEEEEccCCceeeeeec
Q 019258 179 GLQWWDLRRAGSG--GPVLQFKGNFGSQGKASGMIHSVDIH---PS----RKHTCLAGGSSGTVFAWDLRWQQQSIVLSG 249 (343)
Q Consensus 179 ~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~v~~~---p~----~~~~~~sg~~dg~v~iwd~~~~~~~~~~~~ 249 (343)
+|.+||+.+ . +.++++......- .....+..+.++ |. +....++-+..+-|.++|+++++.-. +..
T Consensus 124 kLv~~DL~t---~~~~li~~y~~p~~~~-~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swR-v~~ 198 (381)
T 3q6k_A 124 AIVAYDLKQ---PNYPEVVRYYFPTRLV-EKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWN-VTH 198 (381)
T ss_dssp EEEEEESSS---TTCCEEEEEECCGGGC-CCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEE-EEC
T ss_pred eEEEEECCC---CCceeEEEEECCHHhc-ccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEE-Ecc
Confidence 455677777 4 5555544321100 011457788777 32 34556666667889999998854332 221
Q ss_pred CC--CC--cccccCCc----cccEEEEEEeecCCCCcCCCCCccceEEEecCC-eEEEEecC-------CCccccccccc
Q 019258 250 VG--TG--EAVTHSLS----ESEVWEVQYDCHTKSSNISSSRVLPAMFCSEDG-ILAVVEQG-------EEPFELLAEPC 313 (343)
Q Consensus 250 ~~--~~--~~~~~~~h----~~~v~~v~~~p~~~~~~~~~~~~~~l~s~s~dg-~i~~~~~~-------~~~~~~~~~~~ 313 (343)
.. .. ...+..+. ...|..|+++|+... +++ .|+.+.-.+ .++-.... ....+.+.+..
T Consensus 199 ~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~----~~~--~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg 272 (381)
T 3q6k_A 199 PTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSE----GNR--PAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRG 272 (381)
T ss_dssp GGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTT----SCC--EEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECC
T ss_pred CCCccccCcceEECCEEeEeccCceEEEecCCcCC----CCe--EEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecC
Confidence 00 00 00000111 247889999987321 011 455555444 45554321 11122222222
Q ss_pred c-cc--eeeecCCCCCeeEEccCCceEEEEe
Q 019258 314 A-IN--SFDIDPQNPSDVICSLEWESIAIVS 341 (343)
Q Consensus 314 ~-i~--s~~~~~~~~~~l~~~~~~~~i~~~~ 341 (343)
+ -. .+.+++.+|...+.--+..+|.+|+
T Consensus 273 ~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~ 303 (381)
T 3q6k_A 273 KYNDAIALAYDPKTKVIFFAEANTKQVSCWN 303 (381)
T ss_dssp TTCCEEEEEECTTTCEEEEEESSSSEEEEEE
T ss_pred CCCCcceEEEeCCCCeEEEEeccCCeEEEEe
Confidence 2 22 3455433444444444557888886
Done!