BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019259
(343 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 69 PAPTD-EKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSG 127
PA D E QL +F+ +EL+ A+ NF +ILG GGFG V+KG + G
Sbjct: 13 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----------RLADG 62
Query: 128 ITVAVKSLKPDGLQG-HREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSL 186
VAVK LK + QG ++ EV+ + H NL++L G+C+ +RLLVY +M GS+
Sbjct: 63 TLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122
Query: 187 ENHLFRR 193
+ L R
Sbjct: 123 ASCLRER 129
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 196 TSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQN--LVAWARQYLADKRKLYQIVDPRLEL 253
+ K+DV+ +GV+LLE++TG+R+ D R + + + L+ W + L +K KL +VD L+
Sbjct: 221 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQG 279
Query: 254 NYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
NY + V+++ Q+A C P RP M EVV++L
Sbjct: 280 NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 69 PAPTD-EKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSG 127
PA D E QL +F+ +EL+ A+ NF +ILG GGFG V+KG + G
Sbjct: 5 PAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLADG 54
Query: 128 ITVAVKSLKPDGLQG-HREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSL 186
VAVK LK + QG ++ EV+ + H NL++L G+C+ +RLLVY +M GS+
Sbjct: 55 XLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114
Query: 187 ENHLFRR 193
+ L R
Sbjct: 115 ASCLRER 121
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 196 TSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQN--LVAWARQYLADKRKLYQIVDPRLEL 253
+ K+DV+ +GV+LLE++TG+R+ D R + + + L+ W + L +K KL +VD L+
Sbjct: 213 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQG 271
Query: 254 NYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
NY + V+++ Q+A C P RP M EVV++L
Sbjct: 272 NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 74 EKSPCQLLQFTFQELKSATGNF--RPDSI----LGEGGFGYVFKGWIEENGTAPAKPGSG 127
E S + F+F ELK+ T NF RP S+ +GEGGFG V+KG++ A K +
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAM 65
Query: 128 ITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+ + + LK +++ E+ + + H NLV+L+G+ + D LVY +M GSL
Sbjct: 66 VDITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 188 NHL 190
+ L
Sbjct: 119 DRL 121
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
R +T KSD+YSFGVVLLEI+TG ++D+ R Q L+ + +++ + +D +
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKK 264
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
+ + V+ + +A CL RP + +V ++L +
Sbjct: 265 MN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 74 EKSPCQLLQFTFQELKSATGNF--RPDSI----LGEGGFGYVFKGWIEENGTAPAKPGSG 127
E S + F+F ELK+ T NF RP S+ +GEGGFG V+KG++ A K +
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAM 65
Query: 128 ITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+ + + LK +++ E+ + + H NLV+L+G+ + D LVY +M GSL
Sbjct: 66 VDITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 188 NHL 190
+ L
Sbjct: 119 DRL 121
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
R +T KSD+YSFGVVLLEI+TG ++D+ R Q L+ + +++ + +D +
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKK 264
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
+ + V+ + +A CL RP + +V ++L +
Sbjct: 265 MN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 13/114 (11%)
Query: 83 FTFQELKSATGNF--RPDSI----LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK 136
F+F ELK+ T NF RP S+ +GEGGFG V+KG++ A K + + + + LK
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 137 PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+++ E+ + + H NLV+L+G+ + D LVY +M GSL + L
Sbjct: 69 -------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 115
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
R +T KSD+YSFGVVLLEI+TG ++D+ R Q L+ + +++ + +D +
Sbjct: 201 LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKK 258
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
+ + V+ + +A CL RP + +V ++L +
Sbjct: 259 MN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 77 PCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK 136
P + + +L+ AT NF ++G G FG V+KG + + G VA+K
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRT 72
Query: 137 PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLT 196
P+ QG E+ E++ L HP+LV LIG+C E ++ +L+Y++M G+L+ HL+ L
Sbjct: 73 PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP 132
Query: 197 SKS 199
+ S
Sbjct: 133 TMS 135
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 189 HLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 248
+ + LT KSDVYSFGVVL E+L R ++ + P NL WA + + +L QIVD
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVD 270
Query: 249 PRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
P L + ++K A CL+ + RPSM +V+
Sbjct: 271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 77 PCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK 136
P + + +L+ AT NF ++G G FG V+KG + + G VA+K
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRT 72
Query: 137 PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLT 196
P+ QG E+ E++ L HP+LV LIG+C E ++ +L+Y++M G+L+ HL+ L
Sbjct: 73 PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP 132
Query: 197 SKS 199
+ S
Sbjct: 133 TMS 135
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 189 HLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 248
+ + LT KSDVYSFGVVL E+L R ++ + P NL WA + + +L QIVD
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVD 270
Query: 249 PRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
P L + ++K A CL+ + RPSM +V+
Sbjct: 271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 13/114 (11%)
Query: 83 FTFQELKSATGNF--RPDSI----LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK 136
F+F ELK+ T NF RP S+ GEGGFG V+KG++ A K + + + + LK
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 137 PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+++ E+ + H NLV+L+G+ + D LVY + GSL + L
Sbjct: 66 -------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL 112
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
R +T KSD+YSFGVVLLEI+TG ++D+ R Q L+ + +++ + +D +
Sbjct: 198 LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKK 255
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+ V+ +A CL RP + +V ++L
Sbjct: 256 XN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTYEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRH 194
L R+H
Sbjct: 137 L-RKH 140
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 268
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 23 PHTYEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 74
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 75 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 134
Query: 190 LFRRH 194
L R+H
Sbjct: 135 L-RKH 138
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 223 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 266
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 267 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTYEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRH 194
L R+H
Sbjct: 137 L-RKH 140
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 268
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRH 194
L R+H
Sbjct: 137 L-RKH 140
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 268
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRH 194
L R+H
Sbjct: 137 L-RKH 140
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 268
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRH 194
L R+H
Sbjct: 137 L-RKH 140
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 268
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRH 194
L R+H
Sbjct: 137 L-RKH 140
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 268
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRH 194
L R+H
Sbjct: 137 L-RKH 140
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 26/134 (19%)
Query: 165 IGYCIEDDQRLLVYEFMTRG-------SLENHLFRRHLTSKSDVYSFGVVLLEILTGRRS 217
+G +EDD + TRG + + R TS SDV+S+G+VL E+++
Sbjct: 193 LGRVLEDDPEA---AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY--- 246
Query: 218 MDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKS 277
+RP E + + + + VD L + + QL +C +D +
Sbjct: 247 --GERPYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNN 293
Query: 278 RPSMDEVVKVLTPL 291
RP +++V +L L
Sbjct: 294 RPKFEQIVSILDKL 307
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E P + I VAVK+LK +++ E + L L H +
Sbjct: 21 LGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+VK G C+E D ++V+E+M G L N R H
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAH 109
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 249
+ R T++SDV+S GVVL EI T G+Q W + L++ + I
Sbjct: 202 IMYRKFTTESDVWSLGVVLWEIFT----------YGKQ---PWYQ--LSNNEVIECITQG 246
Query: 250 RLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
R+ L Q+V +L C R+P R ++ + +L L
Sbjct: 247 RV-LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 19 LGGGQFGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 98
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDPSQVYELLEKDYRME 230
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 231 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL 105
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 237
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
N D ++G G FG V G ++ P+K I+VA+K+LK + R +++ E
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+GQ HPN+++L G + ++V E+M GSL++ L R+H
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKH 111
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 239
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 240 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTYEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF 136
Query: 190 LFRRH 194
L R+H
Sbjct: 137 L-RKH 140
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 268
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E +P K + VAVK+LK L +++ E + L L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+VK G C + D ++V+E+M G L N R H
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAH 111
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 249
+ R T++SDV+SFGV+L EI T G+Q W + L++ + I
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFT----------YGKQ---PWFQ--LSNTEVIECITQG 251
Query: 250 RLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
R+ L ++V + C R+P+ R ++ E+ K+L L
Sbjct: 252 RV-LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
N D ++G G FG V G ++ P+K I+VA+K+LK + R +++ E
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+GQ HPN+++L G + ++V E+M GSL++ L R+H
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKH 128
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 213 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 256
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 257 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 237
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL 101
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 16/105 (15%)
Query: 180 FMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 239
F + + L + KSDV++FGV+L EI T S P D
Sbjct: 175 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------ID 218
Query: 240 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
++Y++++ + +KV +L C +P RPS E+
Sbjct: 219 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 12/91 (13%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
LG G +G V++G W + + +TVAVK+LK D ++ E++ E + ++ HP
Sbjct: 228 LGGGQYGEVYEGVWKKYS----------LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHP 276
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
NLV+L+G C + ++ EFMT G+L ++L
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 396 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 439
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 440 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL 98
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDPSQVYELLEKDYRME 230
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 231 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 69 PAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSG 127
PAP K + + + + + LG G +G V++G W + +
Sbjct: 235 PAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS---------- 284
Query: 128 ITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+TVAVK+LK D ++ E++ E + ++ HPNLV+L+G C + ++ EFMT G+L
Sbjct: 285 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 188 NHL 190
++L
Sbjct: 344 DYL 346
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 435 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 478
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 479 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 69 PAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSG 127
PAP K + + + + + LG G +G V++G W + +
Sbjct: 193 PAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS---------- 242
Query: 128 ITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+TVAVK+LK D ++ E++ E + ++ HPNLV+L+G C + ++ EFMT G+L
Sbjct: 243 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 188 NHL 190
++L
Sbjct: 302 DYL 304
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 393 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 436
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 437 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF 136
Query: 190 LFRRH 194
L R+H
Sbjct: 137 L-RKH 140
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 268
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 101
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 16/105 (15%)
Query: 180 FMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 239
F + + L + KSDV++FGV+L EI T S P D
Sbjct: 175 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------ID 218
Query: 240 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
++Y++++ + +KV +L C +P RPS E+
Sbjct: 219 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 237
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
N++ L+G C +D ++ E+ ++G+L +L R Y V E +T
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 237
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 34 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 113
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 245
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 246 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 25 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 104
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 236
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 237 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 234
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 235 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 237
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 234
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 235 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 234
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 235 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + ++ EFMT G+L ++L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL 98
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDPSQVYELLEKDYRME 230
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
+KV +L C +P RPS E+
Sbjct: 231 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 181
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 277 LFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
N D ++G G FG V G ++ P+K I+VA+K+LK + R +++ E
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+GQ HPN+++L G + ++V E M GSL++ L R+H
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKH 111
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+VL E+++ +RP E + + + + VD
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIKAVDEGYR 239
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D +RP +++V +L L
Sbjct: 240 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 122
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 218 LFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 127
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 223 LFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 124
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 220 LFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ ++G G FG V +G ++ AP K S VA+K+LK + R E+++E +GQ
Sbjct: 21 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN+++L G +++ EFM G+L++ L
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL 108
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ ++G G FG V +G ++ AP K S VA+K+LK + R E+++E +GQ
Sbjct: 19 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN+++L G +++ EFM G+L++ L
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL 106
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C+E LV+EFM G L ++L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 93
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
F R+ +SKSDV+SFGV++ E+ + + + R + E + D +++ PR
Sbjct: 178 FSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPR 227
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + V Q+ +C P+ RP+ +++ L +
Sbjct: 228 LASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ + ++G+L +L R
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRAR 135
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
Query: 83 FTFQELKSATGNF---------RPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK 133
FTF++ A F + + ++G G FG V G ++ G I VA+K
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGK------REIFVAIK 67
Query: 134 SLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+LK + R ++++E +GQ HPN++ L G + +++ EFM GSL++ L
Sbjct: 68 TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL 125
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 16/96 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+V+ E+++ +RP + + + ++
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSY-----GERPYWDMT-----------NQDVINAIEQDYR 258
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
L + + QL +C +D RP ++V L
Sbjct: 259 LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C+E LV+EFM G L ++L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 93
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
F R+ +SKSDV+SFGV++ E+ + + + R + E + D +++ PR
Sbjct: 178 FSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPR 227
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
L + V Q+ +C P+ RP+ +++ L + +
Sbjct: 228 LASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C+E LV+EFM G L ++L
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 91
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
F R+ +SKSDV+SFGV++ E+ + + + R + E + D +++ PR
Sbjct: 176 FSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPR 225
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
L + V Q+ +C P+ RP+ +++ L + +
Sbjct: 226 LASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR--EWVAEVDFLGQLH 157
ILGEG FG V +G +++ + G+ + VAVK++K D E+++E +
Sbjct: 41 ILGEGEFGSVMEGNLKQ------EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 158 HPNLVKLIGYCIEDDQR-----LLVYEFMTRGSLENHLFRRHLTS 197
HPN+++L+G CIE + +++ FM G L +L L +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET 139
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TSKSDV++FGV + EI T R M G QN + YL +L Q D
Sbjct: 224 RVYTSKSDVWAFGVTMWEIAT--RGMTPY--PGVQNHEMY--DYLLHGHRLKQPED---- 273
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMD----EVVKVLTPLQDL 294
+ ++ ++ Y+C DP RP+ ++ K+L L D+
Sbjct: 274 ------CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDV 313
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C+E LV+EFM G L ++L
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 96
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
F R+ +SKSDV+SFGV++ E+ + + + R + E + D +++ PR
Sbjct: 181 FSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPR 230
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
L + V Q+ +C P+ RP+ +++ L + +
Sbjct: 231 LASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K++K +G +++ E + + +L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKD-----------KVAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C+E LV+EFM G L ++L
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 113
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
F R+ +SKSDV+SFGV++ E+ + + + R + E + D +++ PR
Sbjct: 198 FSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPR 247
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
L + V Q+ +C P+ RP+ +++ L + +
Sbjct: 248 LASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLHHP 159
LGEG FG V E P +G VAVKSLKP+ H + E++ L L+H
Sbjct: 29 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 160 NLVKLIGYCIED--DQRLLVYEFMTRGSLENHL 190
N+VK G C ED + L+ EF+ GSL+ +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLHHP 159
LGEG FG V E P +G VAVKSLKP+ H + E++ L L+H
Sbjct: 17 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 160 NLVKLIGYCIED--DQRLLVYEFMTRGSLENHL 190
N+VK G C ED + L+ EF+ GSL+ +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 104
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 196 TSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNY 255
+ K DV+S+G++L E++T R+ D+ G + WA ++ P L N
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWA---------VHNGTRPPLIKNL 229
Query: 256 SLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQ 292
+ + L C S+DP RPSM+E+VK++T L
Sbjct: 230 P----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 17/94 (18%)
Query: 98 DSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V K W ++ VA+K ++ + + + ++ E+ L ++
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELRQLSRV 58
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+HPN+VKL G C+ + LV E+ GSL N L
Sbjct: 59 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL 90
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E + P + + VAVK+LK +++ E + L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+V+ G C E L+V+E+M G L N R H
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSH 114
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 187 ENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQI 246
E+ L+R+ T++SDV+SFGVVL EI T G+Q W + L++ + I
Sbjct: 207 ESILYRK-FTTESDVWSFGVVLWEIFT----------YGKQ---PWYQ--LSNTEAIDCI 250
Query: 247 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
R EL +V + C R+P+ R S+ +V
Sbjct: 251 TQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 287
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ + ++G+L +L R
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRAR 135
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV++ EI T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 196 TSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNY 255
+ K DV+S+G++L E++T R+ D+ G + WA ++ P L N
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWA---------VHNGTRPPLIKNL 230
Query: 256 SLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQ 292
+ + L C S+DP RPSM+E+VK++T L
Sbjct: 231 P----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 17/94 (18%)
Query: 98 DSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V K W ++ VA+K ++ + + + ++ E+ L ++
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELRQLSRV 59
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+HPN+VKL G C+ + LV E+ GSL N L
Sbjct: 60 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL 91
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E + P + + VAVK+LK +++ E + L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+V+ G C E L+V+E+M G L N R H
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSH 108
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 187 ENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQI 246
E+ L+R+ T++SDV+SFGVVL EI T G+Q W + L++ + I
Sbjct: 201 ESILYRK-FTTESDVWSFGVVLWEIFT----------YGKQ---PWYQ--LSNTEAIDCI 244
Query: 247 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
R EL +V + C R+P+ R S+ +V
Sbjct: 245 TQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 281
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LGEG FG V P G+G VAVK+LK D HR W E+D L L+H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 160 NLVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRS 217
+++K G C + ++ LV E++ GSL ++L RH + + F + E + S
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 218 MDKKRPSGEQNLVAWARQYLADKRKLYQIVD 248
+NL AR L D +L +I D
Sbjct: 136 QHYIH----RNLA--ARNVLLDNDRLVKIGD 160
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 199 SDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLK 258
SDV+SFGV L E+LT S + P+ L+ A+ + R L ++++ L K
Sbjct: 201 SDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDK 258
Query: 259 GVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
+V L NC + RP+ + ++ +L + +
Sbjct: 259 CPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQLHH 158
ILGEG FG V++G G I VAVK+ K D L ++++E + L H
Sbjct: 15 ILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 68
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR 192
P++VKLIG IE++ ++ E G L ++L R
Sbjct: 69 PHIVKLIG-IIEEEPTWIIMELYPYGELGHYLER 101
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E + P + + VAVK+LK +++ E + L L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+V+ G C E L+V+E+M G L N R H
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSH 137
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 187 ENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQI 246
E+ L+R+ T++SDV+SFGVVL EI T K+P W + L++ + I
Sbjct: 230 ESILYRK-FTTESDVWSFGVVLWEIFT-----YGKQP--------WYQ--LSNTEAIDCI 273
Query: 247 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 284
R EL +V + C R+P+ R S+ +V
Sbjct: 274 TQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQLHH 158
ILGEG FG V++G G I VAVK+ K D L ++++E + L H
Sbjct: 31 ILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 84
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR 192
P++VKLIG IE++ ++ E G L ++L R
Sbjct: 85 PHIVKLIG-IIEEEPTWIIMELYPYGELGHYLER 117
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 33/186 (17%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ ++G G FG V G ++ G I VA+K+LK + R ++++E +GQ
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKRE------IFVAIKTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVV-LLEILTGR 215
HPN++ L G + +++ EFM GSL++ L + + F V+ L+ +L G
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-------RQNDGQFTVIQLVGMLRG- 117
Query: 216 RSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR-LELNYSLKGVQKVSQLAYNCLSRD 274
+A +YLAD +++ + R + +N +L V KVS + D
Sbjct: 118 --------------IAAGMKYLADMNYVHRALAARNILVNSNL--VCKVSDFGLSRFLED 161
Query: 275 PKSRPS 280
S P+
Sbjct: 162 DTSDPT 167
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 16/96 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+V+ E+++ +RP + + + ++
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSY-----GERPYWDMT-----------NQDVINAIEQDYR 232
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
L + + QL +C +D RP ++V L
Sbjct: 233 LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQLHH 158
ILGEG FG V++G G I VAVK+ K D L ++++E + L H
Sbjct: 19 ILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR 192
P++VKLIG IE++ ++ E G L ++L R
Sbjct: 73 PHIVKLIG-IIEEEPTWIIMELYPYGELGHYLER 105
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LGEG FG V P G+G VAVK+LK D HR W E+D L L+H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 160 NLVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFR 192
+++K G C + ++ LV E++ GSL ++L R
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR 111
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 199 SDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLK 258
SDV+SFGV L E+LT S + P+ L+ A+ + R L ++++ L K
Sbjct: 201 SDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDK 258
Query: 259 GVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
+V L NC + RP+ + ++ +L + +
Sbjct: 259 CPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSG--ITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
LGEG FG V K TA G TVAVK LK + R+ ++E + L Q++
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HP+++KL G C +D LL+ E+ GSL L
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL +H++ T++SDV+SFGV+L EI+T
Sbjct: 217 KWMAIESLFDHIY----TTQSDVWSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSG--ITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
LGEG FG V K TA G TVAVK LK + R+ ++E + L Q++
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HP+++KL G C +D LL+ E+ GSL L
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL +H++ T++SDV+SFGV+L EI+T
Sbjct: 217 KWMAIESLFDHIY----TTQSDVWSFGVLLWEIVT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSG--ITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
LGEG FG V K TA G TVAVK LK + R+ ++E + L Q++
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HP+++KL G C +D LL+ E+ GSL L
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL +H++ T++SDV+SFGV+L EI+T
Sbjct: 217 KWMAIESLFDHIY----TTQSDVWSFGVLLWEIVT 247
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C+E LV EFM G L ++L
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYL 94
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 191 FRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 250
F R+ +SKSDV+SFGV++ E+ + + + R + E + D +++ PR
Sbjct: 179 FSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPR 228
Query: 251 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
L + V Q+ +C P+ RP+ +++ L + +
Sbjct: 229 LASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LGEG FG V P G+G VAVK+LK D HR W E+D L L+H
Sbjct: 39 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 160 NLVKLIGYCIEDDQRL---LVYEFMTRGSLENHLFRRHL 195
+++K G C ED LV E++ GSL ++L R +
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSI 131
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 199 SDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLK 258
SDV+SFGV L E+LT S + P+ L+ A+ + R L ++++ L K
Sbjct: 218 SDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDK 275
Query: 259 GVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
+V L NC + RP+ + ++ +L + +
Sbjct: 276 CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 64 SDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAK 123
S +PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 SMDPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDK 55
Query: 124 PGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EF 180
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 115
Query: 181 MTRGSLENHL 190
G+L +L
Sbjct: 116 CKFGNLSTYL 125
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 222 IFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
+GEG FG VF+ G P +P + VAVK LK + ++ E + + +P
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+VKL+G C L++E+M G L L
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
Query: 83 FTFQELKSATGNF---------RPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK 133
FTF++ A F + + ++G G FG V G ++ P K I VA+K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLK----VPGK--REICVAIK 63
Query: 134 SLKPDGL-QGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+LK + R++++E +GQ HPN++ L G + +++ E+M GSL+ L
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V+ G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 40 LGGGQYGEVYVG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L+G C + +V E+M G+L ++L
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYL 119
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL 190
G+L +L
Sbjct: 116 FGNLSTYL 123
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 222 IFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL 190
G+L +L
Sbjct: 116 FGNLSTYL 123
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 222 IFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL 190
G+L +L
Sbjct: 116 FGNLSTYL 123
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 222 IFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 4 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 57
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 58 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 117
Query: 183 RGSLENHL 190
G+L +L
Sbjct: 118 FGNLSTYL 125
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 224 IFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 39 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 92
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 93 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 152
Query: 183 RGSLENHL 190
G+L +L
Sbjct: 153 FGNLSTYL 160
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 259 IFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 4 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 57
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 58 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 117
Query: 183 RGSLENHL 190
G+L +L
Sbjct: 118 FGNLSTYL 125
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 274 IFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAE 149
NFR + +G G F V++ A G+ VA+K ++ L + + + E
Sbjct: 32 ANFRIEKKIGRGQFSEVYRA---------ACLLDGVPVALKKVQIFDLMDAKARADCIKE 82
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRH--LTSKSDVYSFG 205
+D L QL+HPN++K IED++ +V E G L + F++ L + V+ +
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 206 VVL---LEILTGRRSMDK 220
V L LE + RR M +
Sbjct: 143 VQLCSALEHMHSRRVMHR 160
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 22/94 (23%)
Query: 198 KSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNY-- 255
KSD++S G +L E + A + DK LY + + +Y
Sbjct: 216 KSDIWSLGCLLYE------------------MAALQSPFYGDKMNLYSLCKKIEQCDYPP 257
Query: 256 --SLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKV 287
S +++ QL C++ DP+ RP + V V
Sbjct: 258 LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL 190
G+L +L
Sbjct: 116 FGNLSTYL 123
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 272 IFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 100 ILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQLH 157
+LG G FG V+KG W+ E T I VA+K L + G + + E++ E + +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETV------KIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HP+LV+L+G C+ + LV + M G L ++
Sbjct: 99 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYV 130
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N+V L+G C L++ E+ G L N L R+
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 121
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N+V L+G C L++ E+ G L N L R+
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 137
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N+V L+G C L++ E+ G L N L R+
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 139
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 100 ILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQLH 157
+LG G FG V+KG W+ E T I VA+K L + G + + E++ E + +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETV------KIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HP+LV+L+G C+ + LV + M G L ++
Sbjct: 76 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYV 107
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 113
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV+L EI T
Sbjct: 209 LFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N+V L+G C L++ E+ G L N L R+
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 144
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLNLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHLF--RRHLTSKSDVY 202
G+L +L R D+Y
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLY 137
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 218 IFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 117
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV+L EI T
Sbjct: 213 LFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTA--PAKPGSGITVAVKSLKPDGLQGHRE-WVAEV 150
N +LG G FG V N TA +K G I VAVK LK RE ++E+
Sbjct: 46 NLEFGKVLGSGAFGKVM------NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSEL 99
Query: 151 DFLGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+ QL H N+V L+G C L++E+ G L N+L
Sbjct: 100 KMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 128
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV+L EI T
Sbjct: 224 LFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N+V L+G C L++ E+ G L N L R+
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 144
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 121
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV+L EI T
Sbjct: 217 LFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 128
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV+L EI T
Sbjct: 224 LFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 128
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV+L EI T
Sbjct: 224 LFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ ++G G FG V G ++ G + VA+K+LK + R +++ E +GQ
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGK------RDVAVAIKTLKVGYTEKQRRDFLCEASIMGQF 101
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
HPN+V L G ++V EFM G+L+ L R+H
Sbjct: 102 DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL-RKH 138
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+V+ E+++ +RP + + + + + ++
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSY-----GERPYWDMS-----------NQDVIKAIEEGYR 266
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C ++ RP +++V +L +
Sbjct: 267 LPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 120
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV+L EI T
Sbjct: 216 LFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 128
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV+L EI T
Sbjct: 224 LFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + LG G FG V IE + K
Sbjct: 3 DPDELPLDEH--CERLPYDASKWEFPRDRLNLGKPLGRGAFGQV----IEADAFGIDKTA 56
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 57 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 116
Query: 183 RGSLENHL 190
G+L +L
Sbjct: 117 FGNLSTYL 124
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 222 IFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHH 158
++G G FG V+KG ++ + P VA+K+LK + R +++ E +GQ H
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+++L G + +++ E+M G+L+ L
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFL 137
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+SFG+V+ E++T +RP E + ++ + ++
Sbjct: 225 RKFTSASDVWSFGIVMWEVMT-----YGERPYWELS-----------NHEVMKAINDGFR 268
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL C ++ RP ++V +L L
Sbjct: 269 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLNLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHLF--RRHLTSKSDVY 202
G+L +L R D+Y
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLY 137
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 218 IFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-H 157
++GEG FG V K I+++G + A+K +K + HR++ E++ L +L H
Sbjct: 22 VIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN++ L+G C L E+ G+L + L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-H 157
++GEG FG V K I+++G + A+K +K + HR++ E++ L +L H
Sbjct: 29 VIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN++ L+G C L E+ G+L + L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-H 157
++GEG FG V K I+++G + A+K +K + HR++ E++ L +L H
Sbjct: 32 VIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN++ L+G C L E+ G+L + L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
N++ L+G C +D ++ E+ ++G+L +L R
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR 169
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
LF R T +SDV+SFGV+L EI T
Sbjct: 265 LFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL-QGHREWVAEVDFL 153
+ + ++G G FG V G ++ P K I VA+K+LK + R++++E +
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLK----VPGK--REICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
GQ HPN++ L G + +++ E+M GSL+ L
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 106
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL-QGHREWVAEVDFL 153
+ + ++G G FG V G ++ P K I VA+K+LK + R++++E +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLK----VPGK--REICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
GQ HPN++ L G + +++ E+M GSL+ L
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 100
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 67 PDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGS 126
PD P DE+ C+ L + + + A + LG G FG V ++ + K +
Sbjct: 3 PDEVPLDEQ--CERLPYDASKWEFARERLKLGKSLGRGAFGKV----VQASAFGIKKSPT 56
Query: 127 GITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMTR 183
TVAVK LK ++ + E+ L + HH N+V L+G C + L+V E+
Sbjct: 57 CRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKY 116
Query: 184 GSLENHLFRRHLTSKSDVY 202
G+L N +L SK D++
Sbjct: 117 GNLSN-----YLKSKRDLF 130
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 249
+F + ++KSDV+S+GV+L EI S+ G V + + R+ ++ P
Sbjct: 273 IFDKIYSTKSDVWSYGVLLWEIF----SLGGSPYPG----VQMDEDFCSRLREGMRMRAP 324
Query: 250 RLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
YS ++ Q+ +C RDPK RP E+V+ L L
Sbjct: 325 ----EYS---TPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +E++++ + ++G G FG V G ++ G + V
Sbjct: 2 PHTYEDPNQAVHEFAKEIEASCITI--ERVIGAGEFGEVCSGRLKLPGK------RELPV 53
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN++ L G + ++V E+M GSL+
Sbjct: 54 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTF 113
Query: 190 L 190
L
Sbjct: 114 L 114
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R TS SDV+S+G+V+ E+++ +RP E + + + V+
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSY-----GERPYWEMT-----------NQDVIKAVEEGYR 245
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C ++ SRP DE+V +L L
Sbjct: 246 LPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 20 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
H NL++L G + + +V E GSL + L R+H
Sbjct: 74 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-RKH 108
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 16 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
H NL++L G + + +V E GSL + L R+H
Sbjct: 70 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-RKH 104
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 34 TSLVYDAATETRYLNASNRELCAPNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATG 93
TSL A +E Y +N LS+ NP+ Q +Q S
Sbjct: 45 TSLYKKAGSENLYFQGANTV-----HIDLSALNPELV--------QAVQHVVIGPSSLIV 91
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDF 152
+F + ++G G FG V+ G + +N G I AVKSL + + +++ E
Sbjct: 92 HF--NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGII 143
Query: 153 LGQLHHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLE 210
+ HPN++ L+G C+ + L+V +M G L N + H + D+ FG L+
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQ 200
Query: 211 ILTGRRSMDKKR 222
+ G + + K+
Sbjct: 201 VAKGMKFLASKK 212
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 176 LVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
L ++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 258 LPVKWMALESLQTQKF----TTKSDVWSFGVLLWELMT 291
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ EF+ GSL +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL 107
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 16 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
H NL++L G + + +V E GSL + L R+H
Sbjct: 70 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-RKH 104
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 20 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
H NL++L G + + +V E GSL + L R+H
Sbjct: 74 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-RKH 108
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 26 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
H NL++L G + + +V E GSL + L R+H
Sbjct: 80 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-RKH 114
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 16 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
H NL++L G + + +V E GSL + L R+H
Sbjct: 70 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-RKH 104
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 26 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
H NL++L G + + +V E GSL + L R+H
Sbjct: 80 HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL-RKH 114
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 103
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 108
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG V G G VAVK +K D + ++AE + QL H N
Sbjct: 201 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRR 193
LV+L+G +E+ L +V E+M +GSL ++L R
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 281
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 24/96 (25%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 249
L + ++KSDV+SFG++L EI + R V + R L D V P
Sbjct: 358 LREKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLKD-------VVP 397
Query: 250 RLELNYSLKGVQKVSQLAY----NCLSRDPKSRPSM 281
R+E Y + Y NC D +RP+
Sbjct: 398 RVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTF 433
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQLHHP 159
LGEG FG V P G+G VAVK+LK G Q W E++ L L+H
Sbjct: 17 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 160 NLVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLE 210
++VK G C + ++ LV E++ GSL ++L RH + + F + E
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICE 123
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 199 SDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLK 258
SDV+SFGV L E+LT S + P + + Q +L ++++ L +
Sbjct: 196 SDVWSFGVTLYELLTYCDS--NQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDR 253
Query: 259 GVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
++ L NC + RP+ +V +L Q+
Sbjct: 254 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 288
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 102
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 110
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 109
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQLHHP 159
LGEG FG V P G+G VAVK+LK G Q W E++ L L+H
Sbjct: 16 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 160 NLVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLE 210
++VK G C + ++ LV E++ GSL ++L RH + + F + E
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICE 122
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 199 SDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLK 258
SDV+SFGV L E+LT S + P + + Q +L ++++ L +
Sbjct: 195 SDVWSFGVTLYELLTYCDS--NQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDR 252
Query: 259 GVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
++ L NC + RP+ +V +L Q+
Sbjct: 253 CPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 287
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 111
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 105
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG V G G VAVK +K D + ++AE + QL H N
Sbjct: 14 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRR 193
LV+L+G +E+ L +V E+M +GSL ++L R
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 94
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 24/96 (25%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 249
L + ++KSDV+SFG++L EI + R V + R L D V P
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLKD-------VVP 210
Query: 250 RLELNYSLKGVQ----KVSQLAYNCLSRDPKSRPSM 281
R+E Y + V ++ NC D RPS
Sbjct: 211 RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 246
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG V G G VAVK +K D + ++AE + QL H N
Sbjct: 29 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRR 193
LV+L+G +E+ L +V E+M +GSL ++L R
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 109
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 24/96 (25%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 249
L + ++KSDV+SFG++L EI + R V + R L D V P
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLKD-------VVP 225
Query: 250 RLELNYSLKGVQ----KVSQLAYNCLSRDPKSRPSM 281
R+E Y + V ++ NC D RPS
Sbjct: 226 RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 261
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG V G N VAVK +K D + ++AE + QL H N
Sbjct: 20 IGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAEASVMTQLRHSN 66
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRR 193
LV+L+G +E+ L +V E+M +GSL ++L R
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 100
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 24/91 (26%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
++KSDV+SFG++L EI + R V + R L D V PR+E
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLKD-------VVPRVEKG 221
Query: 255 YSLKGVQ----KVSQLAYNCLSRDPKSRPSM 281
Y + V ++ NC D RPS
Sbjct: 222 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 252
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHL 190
+VK G C +R L+ E++ GSL ++L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ I+G G G V G + G + VA+K+LK + R ++++E +GQ
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQ------RDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN+++L G ++V E+M GSL+ L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R +S SDV+SFGVV+ E+L +RP + R + V+
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA-----YGERP-----------YWNMTNRDVISSVEEGYR 272
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D RP ++V VL L
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ I+G G G V G + G + VA+K+LK + R ++++E +GQ
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQ------RDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN+++L G ++V E+M GSL+ L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 16/99 (16%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
R +S SDV+SFGVV+ E+L +RP R + V+
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA-----YGERPYWNMT-----------NRDVISSVEEGYR 272
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L + + QL +C +D RP ++V VL L
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ N T VAVK+LKP G + ++ E + + L H
Sbjct: 20 LGAGQFGEVWMGYYN-NST---------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 68
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L +++ ++ EFM +GSL + L
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFL 98
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG--HREWVAEVDFLGQLHH 158
LGE FG V+KG + G AP + VA+K+LK D +G E+ E +L H
Sbjct: 34 LGEDRFGKVYKGHL--FGPAPGEQTQA--VAIKTLK-DKAEGPLREEFRHEAMLRARLQH 88
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDV 201
PN+V L+G +D +++ + + G L L R + SDV
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMR--SPHSDV 129
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 144
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 145 MKYLASKK 152
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 176 LVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
L ++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 198 LPVKWMALESLQTQKF----TTKSDVWSFGVLLWELMT 231
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + +L+H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKLNH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P DE C+ L + + + + LG G FG V IE + K + TV
Sbjct: 2 PLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTATCRTV 55
Query: 131 AVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMTRGSLE 187
AVK LK HR ++E+ L + HH N+V L+G C + L+V EF G+L
Sbjct: 56 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 115
Query: 188 NHL 190
+L
Sbjct: 116 TYL 118
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 267 IFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 164
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 165 MKYLASKK 172
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 221 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 163
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 164 MKYLASKK 171
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 220 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 27 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 137
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 138 MKYLASKK 145
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 194 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 145
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 146 MKYLASKK 153
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 202 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 232
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + +L+H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKLNH 107
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 144
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 145 MKYLASKK 152
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 201 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 145
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 146 MKYLASKK 153
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 202 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 143
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 144 MKFLASKK 151
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 195 LTSKSDVYSFGVVLLEILT 213
T+KSDV+SFGV+L E++T
Sbjct: 212 FTTKSDVWSFGVLLWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 40 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 150
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 151 MKFLASKK 158
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 195 LTSKSDVYSFGVVLLEILT 213
T+KSDV+SFGV+L E++T
Sbjct: 219 FTTKSDVWSFGVLLWELMT 237
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 142
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 143 MKYLASKK 150
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 199 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 229
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL 190
N+V L+G C + L+V EF G+L +L
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL 114
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 213 IFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 140
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 141 MKYLASKK 148
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 197 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 227
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 145
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 146 MKFLASKK 153
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 202 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 232
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG--HREWVAEVDFLGQLHH 158
LGE FG V+KG + G AP + VA+K+LK D +G E+ E +L H
Sbjct: 17 LGEDRFGKVYKGHL--FGPAPGEQTQA--VAIKTLK-DKAEGPLREEFRHEAMLRARLQH 71
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDV 201
PN+V L+G +D +++ + + G L L R + SDV
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMR--SPHSDV 112
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL 190
N+V L+G C + L+V EF G+L +L
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL 114
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 213 IFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL 190
N+V L+G C + L+V EF G+L +L
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL 114
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 213 IFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 145
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 146 MKFLASKK 153
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 202 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 232
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL 190
N+V L+G C + L+V EF G+L +L
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 114
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 213 IFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 146
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 147 MKFLASKK 154
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 195 LTSKSDVYSFGVVLLEILT 213
T+KSDV+SFGV+L E++T
Sbjct: 215 FTTKSDVWSFGVLLWELMT 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 146
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 147 MKFLASKK 154
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 195 LTSKSDVYSFGVVLLEILT 213
T+KSDV+SFGV+L E++T
Sbjct: 215 FTTKSDVWSFGVLLWELMT 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRR-HLTSKSDVYSFGVVLLEILTG 214
HPN++ L+G C+ + L+V +M G L N + H + D+ FG L++ G
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG---LQVAKG 143
Query: 215 RRSMDKKR 222
+ + K+
Sbjct: 144 MKYLASKK 151
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
++M SL+ F T+KSDV+SFGV+L E++T
Sbjct: 200 KWMALESLQTQKF----TTKSDVWSFGVLLWELMT 230
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
ILG G FG V K EE T G+ +A K +K G++ E E+ + QL H
Sbjct: 96 ILGGGRFGQVHK--CEETAT-------GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLL--EILTGRRS 217
NL++L + +LV E++ G LF R + ++ +L +I G R
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGG----ELFDRIIDESYNLTELDTILFMKQICEGIRH 202
Query: 218 M 218
M
Sbjct: 203 M 203
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 28 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 83
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL 190
N+V L+G C + L+V EF G+L +L
Sbjct: 84 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+F R T +SDV+SFGV+L EI +
Sbjct: 265 IFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD--GLQGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 119
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 151
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LG GGFGYV + WI ++ +G VA+K + + +RE W E+ + +L+HP
Sbjct: 22 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 160 NLVKL------IGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V + +D LL E+ G L +L
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 109
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LG GGFGYV + WI ++ +G VA+K + + +RE W E+ + +L+HP
Sbjct: 23 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 160 NLVKL------IGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V + +D LL E+ G L +L
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 110
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 109
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 110 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 141
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 99
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 131
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 92
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ + VAVK+LKP G + ++ E + + L H
Sbjct: 21 LGAGQFGEVWMGYY----------NNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 69
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L ++ ++ E+M +GSL + L
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFL 99
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 195 LTSKSDVYSFGVVLLEILT 213
T KSDV+SFG++L EI+T
Sbjct: 188 FTIKSDVWSFGILLYEIVT 206
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
+ L H N+V L+G C L++ E+ G L N L R+ ++D
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 133
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
+ L H N+V L+G C L++ E+ G L N L R+ ++D
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 92
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 93 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 124
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 110
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 142
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 107
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 139
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK---PDGLQGHREWVAEVDFLGQLH 157
+G G FG VF G + + T VAVKS + P L+ +++ E L Q
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKA--KFLQEARILKQYS 170
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN+V+LIG C + +V E + G L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 84
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 85 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 116
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK---PDGLQGHREWVAEVDFLGQLH 157
+G G FG VF G + + T VAVKS + P L+ +++ E L Q
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKA--KFLQEARILKQYS 170
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN+V+LIG C + +V E + G L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVYSEQDELDFLMEALIISKFNH 107
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N+V+ IG ++ R ++ E M G L++ L
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 80 LLQFTFQELKSATGNFRPDSILGEGGFGYVFKG-WIEENGTAPAK---PGSGITVAVKSL 135
LL+ F EL + I+G GGFG V++ WI + A P I+ ++++
Sbjct: 1 LLEIDFAELTL-------EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENV 53
Query: 136 KPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+ E L HPN++ L G C+++ LV EF G L L
Sbjct: 54 R-----------QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL 97
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
Query: 190 LFRRHLTSK-SDVYSFGVVLLEILTGR---RSMDKKRPSGEQNLVAWARQYLADKRKLYQ 245
+ R + SK SDV+S+GV+L E+LTG R +D + Y
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA-------------------YG 225
Query: 246 IVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
+ +L L + ++L +C + DP SRPS ++ LT +
Sbjct: 226 VAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 16/87 (18%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAEVDFLGQL 156
+GEG +G V+K AK G VA+K ++ D G+ + E+ L +L
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTR 183
HHPN+V LI + LV+EFM +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK 103
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 16/87 (18%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAEVDFLGQL 156
+GEG +G V+K AK G VA+K ++ D G+ + E+ L +L
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTR 183
HHPN+V LI + LV+EFM +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK 103
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 73
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REH 114
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 73
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REH 114
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 70
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REH 111
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-------KPDGLQGHREWVAEVDFL 153
+G+GGFG V KG + ++ + VA+KSL + + ++ +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
L+HPN+VKL Y + + +V EF+ G L + L + K V ++L+I
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL--RLMLDIAL 133
Query: 214 GRRSMDKKRP 223
G M + P
Sbjct: 134 GIEYMQNQNP 143
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 196 TSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNY 255
T K+D YSF ++L ILTG D+ G+ + R+ + + + PRL
Sbjct: 206 TEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREE-GLRPTIPEDCPPRL---- 259
Query: 256 SLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
+ V +L C S DPK RP +VK L+ L
Sbjct: 260 -----RNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 70
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYV-REH 111
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REH 112
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REH 112
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REH 112
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REH 110
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 72
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REH 113
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 79
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 120
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-------KPDGLQGHREWVAEVDFL 153
+G+GGFG V KG + ++ + VA+KSL + + ++ +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
L+HPN+VKL Y + + +V EF+ G L + L + K V ++L+I
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL--RLMLDIAL 133
Query: 214 GRRSMDKKRP 223
G M + P
Sbjct: 134 GIEYMQNQNP 143
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 196 TSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNY 255
T K+D YSF ++L ILTG D+ G+ + R+ + + + PRL
Sbjct: 206 TEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREE-GLRPTIPEDCPPRL---- 259
Query: 256 SLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
+ V +L C S DPK RP +VK L+ L
Sbjct: 260 -----RNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHR--EWVAEVDFLGQLH 157
+G G FG V + W G VAVK L R E++ EV + +L
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSL 186
HPN+V +G + +V E+++RGSL
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Query: 198 KSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSL 257
KSDVYSFGV+L E+ T ++ P+ V + + RLE+ +L
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK--------------RLEIPRNL 264
Query: 258 KGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
+V+ + C + +P RPS ++ +L PL
Sbjct: 265 N--PQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 39 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
+ L H N+V L+G C L++ E+ G L N L R+
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK 136
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
+ L H N+V L+G C L++ E+ G L N L R+
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK 144
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-------KPDGLQGHREWVAEVDFL 153
+G+GGFG V KG + ++ + VA+KSL + + ++ +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
L+HPN+VKL Y + + +V EF+ G L + L + K V ++L+I
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL--RLMLDIAL 133
Query: 214 GRRSMDKKRP 223
G M + P
Sbjct: 134 GIEYMQNQNP 143
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 196 TSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNY 255
T K+D YSF ++L ILTG D+ G+ + R+ + + + PRL
Sbjct: 206 TEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREE-GLRPTIPEDCPPRL---- 259
Query: 256 SLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
+ V +L C S DPK RP +VK L+ L
Sbjct: 260 -----RNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
+ L H N+V L+G C L++ E+ G L N L R+
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK 144
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHR--EWVAEVDFLGQLH 157
+G G FG V + W G VAVK L R E++ EV + +L
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSL 186
HPN+V +G + +V E+++RGSL
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Query: 198 KSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSL 257
KSDVYSFGV+L E+ T ++ P+ V + + RLE+ +L
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK--------------RLEIPRNL 264
Query: 258 KGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
+V+ + C + +P RPS ++ +L PL
Sbjct: 265 N--PQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 110
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 112
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 72
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 113
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYV-REH 110
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 112
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 75
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 116
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 63
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 104
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 110
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 72
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 113
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 94
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 135
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 72
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 113
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 76
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 117
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 76
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 117
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V+K +E G A K ++ + +++ E++ L HP
Sbjct: 27 LGDGAFGKVYKAKNKETGA---------LAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+VKL+G D + ++ EF G+++
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVD 104
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 32 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
+ L H N+V L+G C L++ E+ G L N L R+
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK 129
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVA 148
S++ F+ LG G + V+KG N T +G+ VA+K +K D +G +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGL---NKT------TGVYVALKEVKLDSEEGTPSTAIR 52
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
E+ + +L H N+V+L +++ LV+EFM
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 66
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 107
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 110
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V+K +E G A K ++ + +++ E++ L HP
Sbjct: 19 LGDGAFGKVYKAKNKETGA---------LAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+VKL+G D + ++ EF G+++
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVD 96
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 85 FQELKS---ATGNFRPDSI------LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL 135
FQ +K T + P+ LG+G FG V+K +E + + A K +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVI 70
Query: 136 KPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+ +++ E+D L HPN+VKL+ ++ ++ EF G+++
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 85 FQELKS---ATGNFRPDSI------LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL 135
FQ +K T + P+ LG+G FG V+K +E + + A K +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVI 70
Query: 136 KPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+ +++ E+D L HPN+VKL+ ++ ++ EF G+++
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 85 FQELKS---ATGNFRPDSI------LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL 135
FQ +K T + P+ LG+G FG V+K +E + + A K +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVI 70
Query: 136 KPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+ +++ E+D L HPN+VKL+ ++ ++ EF G+++
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 18 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 104
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 186 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 226
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 227 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 194 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 234
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 235 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 194 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 234
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 235 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 24 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 110
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 192 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 232
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 233 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 23 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 109
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 191 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 231
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 232 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 33 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 201 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 241
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 242 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 195 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 235
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 236 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 188 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 228
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 229 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 195 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 235
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 236 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 188 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 228
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 229 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 55 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 223 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 263
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 264 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 33 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L++ E MTRG L+++L
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M+ SL++ +F T+ SDV+SFGVVL EI T L
Sbjct: 201 LLPVRWMSPESLKDGVF----TTYSDVWSFGVVLWEIAT---------------LAEQPY 241
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Q L++++ L +++ L L+ + +L C +PK RPS E++
Sbjct: 242 QGLSNEQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMT 182
+ L +L+HPN+VKL+ +++ LV+EF++
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS 86
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMT 182
+ L +L+HPN+VKL+ +++ LV+EF++
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS 88
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMT 182
+ L +L+HPN+VKL+ +++ LV+EF++
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS 88
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 6 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 54
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMT 182
+ L +L+HPN+VKL+ +++ LV+EF++
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS 87
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VAVK +K +G E+ E + +L HP
Sbjct: 16 LGSGQFGVVKLG----------KWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPK 64
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
LVK G C ++ +V E+++ G L N+L R H
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSH 97
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVD 151
R +LG G FG V+KG WI P I VA+K L+ + + ++E + E
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+ + P + +L+G C+ + LV + M G L +H+
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHV 109
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILT 213
+ RR T +SDV+S+GV + E++T
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 12 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 60
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C + ++ E+M G L N+L
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYL 90
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 238
+F R S L +SKSD+++FGV++ EI + + ++ + E +++A
Sbjct: 162 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIA 215
Query: 239 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
+LY+ P L +KV + Y+C RP+ ++ + + D
Sbjct: 216 QGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLE 128
Query: 220 KKR 222
KR
Sbjct: 129 SKR 131
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLE 508
Query: 220 KKR 222
KR
Sbjct: 509 SKR 511
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLE 508
Query: 220 KKR 222
KR
Sbjct: 509 SKR 511
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 88
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 16 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 64
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C + ++ E+M G L N+L
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYL 94
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 238
+F R S L +SKSD+++FGV++ EI + + ++ + E +++A
Sbjct: 166 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIA 219
Query: 239 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
+LY+ P L +KV + Y+C RP+ ++ + + D
Sbjct: 220 QGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 68 DPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGS 126
+P ++P Q L +E F+ +LG G FG V+KG WI E
Sbjct: 29 EPLTPSGEAPNQALLRILKE-----TEFKKIKVLGSGAFGTVYKGLWIPEGEKV------ 77
Query: 127 GITVAVKSLK-PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGS 185
I VA+ L+ + ++E + E + + +P++ +L+G C+ +L+ + M G
Sbjct: 78 KIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGC 136
Query: 186 LENHLFRRH 194
L +++ R H
Sbjct: 137 LLDYV-REH 144
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 83
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 6 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 54
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 6 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 54
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLE 128
Query: 220 KKR 222
KR
Sbjct: 129 SKR 131
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C + ++ E+M G L N+L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 238
+F R S L +SKSD+++FGV++ EI + + ++ + E +++A
Sbjct: 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIA 235
Query: 239 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
+LY+ P L +KV + Y+C RP+ ++ + + D
Sbjct: 236 QGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 6 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 54
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 88
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C + ++ E+M G L N+L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYL 95
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 238
+F R S L +SKSD+++FGV++ EI + + ++ + E +++A
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIA 220
Query: 239 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
+LY+ P L +KV + Y+C RP+ ++ + + D
Sbjct: 221 QGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C + ++ E+M G L N+L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 167 YCIEDDQRLLV-YEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSG 225
Y ++D++ V +F R S L +SKSD+++FGV++ EI + + M +R +
Sbjct: 169 YVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTN 227
Query: 226 EQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
+ +++A +LY+ P L +KV + Y+C RP+ ++
Sbjct: 228 SET-----AEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILL 272
Query: 286 KVLTPLQD 293
+ + D
Sbjct: 273 SNILDVMD 280
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 91
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C + ++ E+M G L N+L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYL 95
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 238
+F R S L +SKSD+++FGV++ EI + + ++ + E +++A
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIA 220
Query: 239 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQDLN 295
+LY+ P L +KV + Y+C RP+ ++ + + D N
Sbjct: 221 QGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEN 267
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ L +L+HPN+VKL+ +++ LV+EF+
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 91
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 23 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
LV+L G C + ++ E+M G L N+L
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYL 101
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 179 EFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 238
+F R S L +SKSD+++FGV++ EI + + M +R + + +++A
Sbjct: 173 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSET-----AEHIA 226
Query: 239 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
+LY+ P L +KV + Y+C RP+ ++ + + D
Sbjct: 227 QGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 20 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 74 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLE 130
Query: 220 KKR 222
KR
Sbjct: 131 SKR 133
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 46 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 100 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLE 156
Query: 220 KKR 222
KR
Sbjct: 157 SKR 159
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +L G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 76
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L++ + M G L +++ R H
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REH 117
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 15 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 69 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLE 125
Query: 220 KKR 222
KR
Sbjct: 126 SKR 128
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 21 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 75 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLE 131
Query: 220 KKR 222
KR
Sbjct: 132 SKR 134
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLE 128
Query: 220 KKR 222
KR
Sbjct: 129 SKR 131
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLE 128
Query: 220 KKR 222
KR
Sbjct: 129 SKR 131
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 23 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMD 219
++VKLIG I ++ ++ E T G L + L R + D+ S + ++ T ++
Sbjct: 77 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLE 133
Query: 220 KKR 222
KR
Sbjct: 134 SKR 136
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +L G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 110
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +L G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 76
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+ + +P++ +L+G C+ +L+ + M G L +++ R H
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REH 117
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG +G V+K +E G VA+K + + +E + E+ + Q P+
Sbjct: 37 LGEGSYGSVYKAIHKETGQ---------IVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVL------LEILTG 214
+VK G ++ +V E+ GS+ + + R+ T D +L LE L
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLHF 143
Query: 215 RRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSL-----KGVQKVSQLAYN 269
R + + +G L LAD Q+ D + N + + + ++ YN
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 270 CLS 272
C++
Sbjct: 204 CVA 206
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW----VAEVDFLGQL 156
LG+G F +FKG E G + + + V + HR + + +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD------KAHRNYSESFFEAASMMSKL 69
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
H +LV G C+ D+ +LV EF+ GSL+ +L
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
++L +D +SFG L EI +G G++ L A L +RKL Q + R +
Sbjct: 193 KNLNLATDKWSFGTTLWEICSG----------GDKPLSA-----LDSQRKL-QFYEDRHQ 236
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L +++ L NC+ +P RPS +++ L L
Sbjct: 237 L--PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
NF+ +GEG +G V+K + G A + + + ++ E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 56
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+L+HPN+VKL+ +++ LV+EF+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
NF+ +GEG +G V+K + G A + + + ++ E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 55
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+L+HPN+VKL+ +++ LV+EF+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL 83
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
R +LG G FG V KG WI E + I V +K ++ G Q + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESI------KIPVCIKVIEDKSGRQSFQAVTDHML 85
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+G L H ++V+L+G C + LV +++ GSL +H+ R+H
Sbjct: 86 AIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHV-RQH 126
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 100 ILGE-GGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHH 158
I+GE G FG V+K +E + + A K + + +++ E+D L H
Sbjct: 16 IIGELGDFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 66
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
PN+VKL+ ++ ++ EF G+++
Sbjct: 67 PNIVKLLDAFYYENNLWILIEFCAGGAVD 95
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
R +LG G FG V KG WI E + I V +K ++ G Q + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIK------IPVCIKVIEDKSGRQSFQAVTDHML 67
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
+G L H ++V+L+G C + LV +++ GSL +H+ R+H
Sbjct: 68 AIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHV-RQH 108
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEGGF YV G A+K + Q E E D +HPN
Sbjct: 37 LGEGGFSYV---------DLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPN 87
Query: 161 LVKLIGYCIED----DQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRR 216
+++L+ YC+ + + L+ F RG+L N + R L K + + +L +L R
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIER--LKDKGNFLTEDQILWLLLGICR 145
Query: 217 SMDKKRPSG 225
++ G
Sbjct: 146 GLEAIHAKG 154
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 95 FRPD-----SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAE 149
FRP +LG+G FG K E G + +K L + R ++ E
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEV---------MVMKELIRFDEETQRTFLKE 57
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSL 186
V + L HPN++K IG +D + + E++ G+L
Sbjct: 58 VKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV- 147
K+ +F +LG+G FG VF +P SG A+K LK L+ R+ V
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLV------RKVTRPDSGHLYAMKVLKKATLKV-RDRVR 76
Query: 148 --AEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRHLTSKSDV 201
E D L ++HP +VKL Y + + +L L+ +F+ G L L + + ++ DV
Sbjct: 77 TKMERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 132
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAEVDF 152
F +LG+G FG V + +++ + GS + VAVK LK D + E++ E
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQ------EDGSFVKVAVKMLKADIIASSDIEEFLREAAC 78
Query: 153 LGQLHHPNLVKLIGYCIEDDQR------LLVYEFMTRGSLENHLF 191
+ + HP++ KL+G + + +++ FM G L L
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL 123
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 20/97 (20%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 244
SL ++L+ H SDV++FGV + EI+T ++ +G +N A YL +L
Sbjct: 210 SLADNLYTVH----SDVWAFGVTMWEIMTRGQT----PYAGIEN--AEIYNYLIGGNRLK 259
Query: 245 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSM 281
Q + +++V L Y C S DPK RPS
Sbjct: 260 Q----------PPECMEEVYDLMYQCWSADPKQRPSF 286
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 143 HREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVY 202
H E E+ L L HPN++KL + LV EF G L + RH + D
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 203 SFGVVLLEILTG 214
+ ++ +IL+G
Sbjct: 150 N---IMKQILSG 158
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK-PDGLQG-HREWVA 148
AT + P + +G G +G V+K P SG VA+KS++ P+G +G V
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 149 EVDFLGQLH---HPNLVKLIGYC 168
EV L +L HPN+V+L+ C
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVC 75
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK-PDGLQG-HREWVA 148
AT + P + +G G +G V+K P SG VA+KS++ P+G +G V
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 149 EVDFLGQLH---HPNLVKLIGYC 168
EV L +L HPN+V+L+ C
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVC 75
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW----VAEVDFLGQL 156
LG+G F +FKG E G + + + V + HR + + +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD------KAHRNYSESFFEAASMMSKL 69
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
H +LV G C D+ +LV EF+ GSL+ +L
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL 103
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 193 RHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
++L +D +SFG L EI +G G++ L A L +RKL Q + R +
Sbjct: 193 KNLNLATDKWSFGTTLWEICSG----------GDKPLSA-----LDSQRKL-QFYEDRHQ 236
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 291
L +++ L NC+ +P RPS +++ L L
Sbjct: 237 L--PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK-PDGLQG-HREWVA 148
AT + P + +G G +G V+K P SG VA+KS++ P+G +G V
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 149 EVDFLGQLH---HPNLVKLIGYC 168
EV L +L HPN+V+L+ C
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVC 75
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVD 151
GN++ LGEG FG V + G A + K L +QG E E+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIE--REIS 66
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSF 204
+L L HP+++KL D+ ++V E+ L +++ +R S+ + F
Sbjct: 67 YLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRF 118
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVD 151
GN++ LGEG FG V + G A + K L +QG E E+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIE--REIS 65
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSF 204
+L L HP+++KL D+ ++V E+ L +++ +R S+ + F
Sbjct: 66 YLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRF 117
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M SL++ +F T+ SD++SFGVVL EI +L
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEI---------------TSLAEQPY 233
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
Q L++++ L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 234 QGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L+V E M G L+++L
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M SL++ +F T+ SD++SFGVVL EI +L
Sbjct: 190 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEI---------------TSLAEQPY 230
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
Q L++++ L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 231 QGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L+V E M G L+++L
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 108
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVD 151
GN++ LGEG FG V + G A + K L +QG E E+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIE--REIS 56
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSF 204
+L L HP+++KL D+ ++V E+ L +++ +R S+ + F
Sbjct: 57 YLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRF 108
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M SL++ +F T+ SD++SFGVVL EI + L
Sbjct: 192 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITS---------------LAEQPY 232
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
Q L++++ L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 233 QGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L+V E M G L+++L
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 110
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVD 151
GN++ LGEG FG V + G A + K L +QG E E+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIE--REIS 60
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSF 204
+L L HP+++KL D+ ++V E+ L +++ +R S+ + F
Sbjct: 61 YLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRF 112
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M SL++ +F T+ SD++SFGVVL EI +L
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEI---------------TSLAEQPY 233
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
Q L++++ L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 234 QGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L+V E M G L+++L
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M SL++ +F T+ SD++SFGVVL EI +L
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEI---------------TSLAEQPY 233
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
Q L++++ L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 234 QGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L+V E M G L+++L
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHH 158
S LG+G FG V E P +G VAVK L+ G R++ E+ L LH
Sbjct: 13 SQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 67
Query: 159 PNLVKL--IGYCIEDDQRLLVYEFMTRGSLENHLFR---RHLTSKSDVYSFGVVL-LEIL 212
+VK + Y + LV E++ G L + L R R S+ +YS + +E L
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 213 TGRRSMDK 220
RR + +
Sbjct: 128 GSRRCVHR 135
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 4/29 (13%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILT 213
SL +++F R +SDV+SFGVVL E+ T
Sbjct: 185 SLSDNIFSR----QSDVWSFGVVLYELFT 209
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYE 179
+ L +L+HPN+VKL+ +++ LV+E
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFE 81
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEVDFLGQLH 157
+G G FG V+ N VA+K + G Q + +W + EV FL +L
Sbjct: 62 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 158 HPNLVKLIGYCIEDDQRLLVYEF 180
HPN ++ G + + LV E+
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEY 135
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH---REWVAEVDFLGQLH 157
LG+G FG V+ + S VA+K L ++ + E++ LH
Sbjct: 31 LGKGKFGNVYLA---------REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN+++L Y + + L+ E+ RG L L
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL 114
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEVDFLGQLH 157
+G G FG V+ N VA+K + G Q + +W + EV FL +L
Sbjct: 23 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 158 HPNLVKLIGYCIEDDQRLLVYEF 180
HPN ++ G + + LV E+
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEY 96
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYE 179
+ L +L+HPN+VKL+ +++ LV+E
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFE 85
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 130 VAVKSLKPDGLQ-GHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
VA+K + + Q E + E+ + Q HHPN+V + D+ LV + ++ GS+ +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 189 HLFRRHLTSKS-------DVYSFGVVLLEILTGRRSMDK 220
+ +H+ +K D + +L E+L G + K
Sbjct: 103 II--KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 198 KSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSL 257
K+D++SFG+ +E+ TG K P ++ Q D L V + L
Sbjct: 207 KADIWSFGITAIELATGAAPYHKYPP---MKVLMLTLQ--NDPPSLETGVQDKEMLKKYG 261
Query: 258 KGVQKVSQLAYNCLSRDPKSRPSMDEVVK 286
K +K+ L CL +DP+ RP+ E+++
Sbjct: 262 KSFRKMISL---CLQKDPEKRPTAAELLR 287
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHH 158
S LG+G FG V E P +G VAVK L+ G R++ E+ L LH
Sbjct: 16 SQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 70
Query: 159 PNLVKL--IGYCIEDDQRLLVYEFMTRGSLENHLFR---RHLTSKSDVYSFGVVL-LEIL 212
+VK + Y LV E++ G L + L R R S+ +YS + +E L
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 213 TGRRSMDK 220
RR + +
Sbjct: 131 GSRRCVHR 138
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 4/29 (13%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILT 213
SL +++F R +SDV+SFGVVL E+ T
Sbjct: 188 SLSDNIFSR----QSDVWSFGVVLYELFT 212
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 130 VAVKSLKPDGLQ-GHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
VA+K + + Q E + E+ + Q HHPN+V + D+ LV + ++ GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 189 HLFRRHLTSKS-------DVYSFGVVLLEILTGRRSMDK 220
+ +H+ +K D + +L E+L G + K
Sbjct: 98 II--KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 198 KSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSL 257
K+D++SFG+ +E+ TG K P ++ Q D L V + L
Sbjct: 202 KADIWSFGITAIELATGAAPYHKYPP---MKVLMLTLQ--NDPPSLETGVQDKEMLKKYG 256
Query: 258 KGVQKVSQLAYNCLSRDPKSRPSMDEVVK 286
K +K+ L CL +DP+ RP+ E+++
Sbjct: 257 KSFRKMISL---CLQKDPEKRPTAAELLR 282
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHH 158
S LG+G FG V E P +G VAVK L+ G R++ E+ L LH
Sbjct: 17 SQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 71
Query: 159 PNLVKL--IGYCIEDDQRLLVYEFMTRGSLENHLFR---RHLTSKSDVYSFGVVL-LEIL 212
+VK + Y LV E++ G L + L R R S+ +YS + +E L
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 131
Query: 213 TGRRSMDK 220
RR + +
Sbjct: 132 GSRRCVHR 139
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 4/29 (13%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILT 213
SL +++F R +SDV+SFGVVL E+ T
Sbjct: 189 SLSDNIFSR----QSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHH 158
S LG+G FG V E P +G VAVK L+ G R++ E+ L LH
Sbjct: 29 SQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 83
Query: 159 PNLVKL--IGYCIEDDQRLLVYEFMTRGSLENHLFR---RHLTSKSDVYSFGVVL-LEIL 212
+VK + Y LV E++ G L + L R R S+ +YS + +E L
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 143
Query: 213 TGRRSMDK 220
RR + +
Sbjct: 144 GSRRCVHR 151
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 4/29 (13%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILT 213
SL +++F R +SDV+SFGVVL E+ T
Sbjct: 201 SLSDNIFSR----QSDVWSFGVVLYELFT 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVL 208
EV L QL HPN++KL + + LV E G L + + R S+ D V++
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA---AVIM 127
Query: 209 LEILTGRRSMDK----KRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQK 262
++L+G + K R +NL+ ++ + L +IVD L ++ + G K
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESKS----RDALIKIVDFGLSAHFEVGGKMK 181
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L+V E M G L+++L
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M SL++ +F T+ SD++SFGVVL EI +L
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEI---------------TSLAEQPY 233
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
Q L++++ L ++D L+ ++V+ L C +P RP+ E+V +L
Sbjct: 234 QGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L+V E M G L+++L
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M SL++ +F T+ SD++SFGVVL EI + L
Sbjct: 193 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITS---------------LAEQPY 233
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
Q L++++ L ++D L+ ++V+ L C +P RP+ E+V +L
Sbjct: 234 QGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVL 208
EV L QL HPN++KL + + LV E G L + + R S+ D V++
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA---AVIM 110
Query: 209 LEILTGRRSMDK----KRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQK 262
++L+G + K R +NL+ ++ + L +IVD L ++ + G K
Sbjct: 111 KQVLSGTTYLHKHNIVHRDLKPENLLLESKS----RDALIKIVDFGLSAHFEVGGKMK 164
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++V+L+G + L+V E M G L+++L
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 112
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 20/114 (17%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 234
LL +M SL++ +F T+ SD++SFGVVL EI + L
Sbjct: 194 LLPVRWMAPESLKDGVF----TTSSDMWSFGVVLWEITS---------------LAEQPY 234
Query: 235 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
Q L++++ L ++D L+ ++V+ L C +P RP+ E+V +L
Sbjct: 235 QGLSNEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 374 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 428
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV 201
+P +V++IG C E + +LV E G L +L + RH+ K+ +
Sbjct: 429 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 472
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 30 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV 201
+P +V++IG C E + +LV E G L +L + RH+ K+ +
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 128
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 83 FTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG 142
F Q ++ R +L EGGF +V++ GSG A+K L + +
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEA---------QDVGSGREYALKRLLSNEEEK 68
Query: 143 HREWVAEVDFLGQLH-HPNLVKL 164
+R + EV F+ +L HPN+V+
Sbjct: 69 NRAIIQEVCFMKKLSGHPNIVQF 91
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 375 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 429
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV-----YSFGVVLLE 210
+P +V++IG C E + +LV E G L +L + RH+ K+ + S G+ LE
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 487
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 32 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 86
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV 201
+P +V++IG C E + +LV E G L +L + RH+ K+ +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 130
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 32 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 86
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV 201
+P +V++IG C E + +LV E G L +L + RH+ K+ +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 130
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 22 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 76
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV 201
+P +V++IG C E + +LV E G L +L + RH+ K+ +
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 120
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
++ +LG+G FG V + G A K S V K+ K L+ EV L
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-------EVQLL 86
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
QL HPN++KL + + LV E T G L + + R S+ D ++ ++L+
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---ARIIRQVLS 143
Query: 214 GRRSMDKKR 222
G M K +
Sbjct: 144 GITYMHKNK 152
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 16 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 70
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV 201
+P +V++IG C E + +LV E G L +L + RH+ K+ +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 114
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 87 ELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW 146
++KS + LGEG F V+K + T I + +S DG+ +R
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGI--NRTA 59
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFM 181
+ E+ L +L HPN++ L+ LV++FM
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V + + E T G A K + E+ + L HP
Sbjct: 59 LGTGAFGVVHR--VTERAT-------GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSL 186
LV L +D++ +++YEFM+ G L
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGEL 135
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS-LKPDGLQGHREWV 147
K +F LG+G FG V+ ++N A + V KS L+ +G++ +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMA-----LKVLFKSQLEKEGVE--HQLR 63
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
E++ L HPN++++ Y + + L+ EF RG L L
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 106
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 12 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 66
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV 201
+P +V++IG C E + +LV E G L +L + RH+ K+ +
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 110
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 10 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 64
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV 201
+P +V++IG C E + +LV E G L +L + RH+ K+ +
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 108
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 16 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 70
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR-RHLTSKSDV 201
+P +V++IG C E + +LV E G L +L + RH+ K+ +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII 114
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS-LKPDGLQGHREWV 147
K +F LG+G FG V+ ++N A + V KS L+ +G++ +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMA-----LKVLFKSQLEKEGVE--HQLR 62
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
E++ L HPN++++ Y + + L+ EF RG L L
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 105
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS-LKPDGLQGHREWVAEVDFLGQLHHP 159
LG+G FG V+ ++N A + V KS L+ +G++ + E++ L HP
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMA-----LKVLFKSQLEKEGVE--HQLRREIEIQSHLRHP 74
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N++++ Y + + L+ EF RG L L
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKEL 105
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V + + E T G A K + E+ + L HP
Sbjct: 165 LGTGAFGVVHR--VTERAT-------GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRH 194
LV L +D++ +++YEFM+ G L + H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH 249
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
++ +LG+G FG V + G A K S V K+ K L+ EV L
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-------EVQLL 80
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
QL HPN++KL + + LV E T G L + + R S+ D ++ ++L+
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---ARIIRQVLS 137
Query: 214 GRRSMDKKR 222
G M K +
Sbjct: 138 GITYMHKNK 146
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG 154
F+ + + G+G FG V G + +G++VA+K + D +RE D L
Sbjct: 25 FQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFRNRELQIMQD-LA 74
Query: 155 QLHHPNLVKLIGY 167
LHHPN+V+L Y
Sbjct: 75 VLHHPNIVQLQSY 87
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFL 153
++ +LG+G FG V G V V S + + +E + EV L
Sbjct: 52 YKGQRVLGKGSFGEVIL-------CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 104
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
QL HPN++KL + + LV E T G L + + R S+ D ++ ++L+
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---ARIIRQVLS 161
Query: 214 GRRSMDKKR 222
G M K +
Sbjct: 162 GITYMHKNK 170
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
++ +LG+G FG V + G A K S V K+ K L+ EV L
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-------EVQLL 103
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
QL HPN++KL + + LV E T G L + + R S+ D ++ ++L+
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---ARIIRQVLS 160
Query: 214 GRRSMDKKR 222
G M K +
Sbjct: 161 GITYMHKNK 169
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL--KPDGLQGHREWVAEVDFLGQLH 157
++GEG +G V K ++ G VA+K D + + E+ L QL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGR---------IVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
H NLV L+ C + + LV+EF+ L++
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDD 113
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 244
S EN + ++ KSDV+S G +L + G+ +Q + KL+
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKLH 278
Query: 245 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 244
S EN + ++ KSDV+S G +L + G+ +Q + KL+
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKLH 278
Query: 245 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 244
S EN + ++ KSDV+S G +L + G+ +Q + KL+
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKLH 278
Query: 245 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 244
S EN + ++ KSDV+S G +L + G+ +Q + KL+
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKLH 234
Query: 245 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 235 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 76 SPCQLL-QFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS 134
SP + L + L+ G F ++G G +G V+KG +G A+K
Sbjct: 6 SPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG---------RHVKTGQLAAIKV 56
Query: 135 LKPDGLQGHREWVAEVDFLGQL-HHPNLVKLIGYCIE------DDQRLLVYEFMTRGSLE 187
+ G + E E++ L + HH N+ G I+ DDQ LV EF GS+
Sbjct: 57 MDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT 115
Query: 188 N 188
+
Sbjct: 116 D 116
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 200 DVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKG 259
DV+S G +L + G+ +Q + KL+ I+DP E+ +
Sbjct: 202 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 246
Query: 260 VQKVSQLAYNCLSRDPKSRPSMDEVV 285
+ + + CL RDPK R S+ E++
Sbjct: 247 EKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ RG + L
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL 104
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 244
S EN + ++ KSDV+S G +L + G+ +Q + KL+
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKLH 230
Query: 245 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 231 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 243
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 244 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 241
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 242 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 272
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 233
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 234 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 242
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 243 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 239
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 240 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 235
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 236 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 266
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ RG + L
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL 104
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 233
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 234 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 233
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 234 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 233
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 234 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 238
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 239 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 269
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 234
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 235 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 265
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 185 SLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 244
S EN + ++ KSDV+S G +L + G+ +Q + KL+
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKLH 250
Query: 245 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 239
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 240 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 17/103 (16%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK-----SLKPDGLQGHREWV 147
GN+R +G+G F V +G VAVK L P LQ +
Sbjct: 15 GNYRLQKTIGKGNFAKV---------KLARHVLTGREVAVKIIDKTQLNPTSLQ---KLF 62
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV + L+HPN+VKL + LV E+ + G + ++L
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 105
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 16/91 (17%)
Query: 195 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 254
T+KSDV+SFGV+L E+LT R R +L +LA R+L Q
Sbjct: 205 FTTKSDVWSFGVLLWELLT--RGAPPYRHIDPFDLT----HFLAQGRRLPQP-------E 251
Query: 255 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 285
Y + +V Q C DP RP+ +V
Sbjct: 252 YCPDSLYQVMQ---QCWEADPAVRPTFRVLV 279
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 98 DSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQ 155
D ++G+G FG V+ G +I++ + I A+KSL + +Q ++ E +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQA-------QNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 156 LHHPNLVKLIGYCIEDD---QRLLVYEFMTRGSLENHLF--RRHLTSKSDVYSFGV 206
L+HPN++ LIG + + LL Y M G L + +R+ T K D+ SFG+
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQFIRSPQRNPTVK-DLISFGL 131
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 200 DVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKG 259
DV+S G +L + G+ +Q + KL+ I+DP E+ +
Sbjct: 221 DVWSLGCILYYMTYGKTPF---------------QQIINQISKLHAIIDPNHEIEFPDIP 265
Query: 260 VQKVSQLAYNCLSRDPKSRPSMDEVV 285
+ + + CL RDPK R S+ E++
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 229
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 230 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 260
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 20/96 (20%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 252
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD-- 228
Query: 253 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 288
+++ QL C P+ RP+ D + VL
Sbjct: 229 -----NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 259
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 17/96 (17%)
Query: 187 ENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQI 246
E L+ R T KSDV+SFG++L E++T R P N R+ L + Y++
Sbjct: 176 EAALYGR-FTIKSDVWSFGILLTELVTKGRV-----PYPGMN----NREVLEQVERGYRM 225
Query: 247 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 282
P+ + SL +L +C +DP+ RP+ +
Sbjct: 226 PCPQ-DCPISL------HELMIHCWKKDPEERPTFE 254
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVL 208
EV+ L +L HPN++KL + +V E T G L + + +R S+ D ++
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA---ARII 127
Query: 209 LEILTGRRSMDK 220
++ +G M K
Sbjct: 128 KQVFSGITYMHK 139
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVL 208
EV+ L +L HPN++KL + +V E T G L + + +R S+ D ++
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA---ARII 127
Query: 209 LEILTGRRSMDK 220
++ +G M K
Sbjct: 128 KQVFSGITYMHK 139
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDF 152
+F P LG GGFG VF+ A+K ++ + RE V EV
Sbjct: 6 DFEPIQCLGRGGFGVVFEA---------KNKVDDCNYAIKRIRLPNRELAREKVMREVKA 56
Query: 153 LGQLHHPNLVKLIGYCIEDD 172
L +L HP +V+ +E +
Sbjct: 57 LAKLEHPGIVRYFNAWLEKN 76
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 11/121 (9%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
++ +LG+G FG V + G A K S V K+ K L+ EV L
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-------EVQLL 80
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILT 213
QL HPN+ KL + + LV E T G L + + R S+ D ++ ++L+
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA---ARIIRQVLS 137
Query: 214 G 214
G
Sbjct: 138 G 138
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 263 VSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
VS+L C++ DP RP D +V +L +QD
Sbjct: 240 VSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
ILG+G VF+G ++ G A + + L+P +Q + E + L +L+H
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIK---VFNNISFLRPVDVQ-----MREFEVLKKLNHK 67
Query: 160 NLVKLIGYCIEDD----QRLLVYEFMTRGSL 186
N+VKL + IE++ ++L+ EF GSL
Sbjct: 68 NIVKL--FAIEEETTTRHKVLIMEFCPCGSL 96
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVL 208
EV+ L +L HPN++KL + +V E T G L + + +R S+ D ++
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA---ARII 127
Query: 209 LEILTGRRSMDK 220
++ +G M K
Sbjct: 128 KQVFSGITYMHK 139
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 23/96 (23%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-----PDGLQGHREWVAEVDFLG 154
+G G FG V+KG W + VAVK LK P+ Q R EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKILKVVDPTPEQFQAFRN---EVAVLR 87
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
+ H N++ +GY +D+ +V ++ SL HL
Sbjct: 88 KTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHL 122
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 195 LTSKSDVYSFGVVLLEILTG 214
+ +SDVYS+G+VL E++TG
Sbjct: 214 FSFQSDVYSYGIVLYELMTG 233
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
ILG+G VF+G ++ G A + + L+P +Q + E + L +L+H
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIK---VFNNISFLRPVDVQ-----MREFEVLKKLNHK 67
Query: 160 NLVKLIGYCIEDD----QRLLVYEFMTRGSL 186
N+VKL + IE++ ++L+ EF GSL
Sbjct: 68 NIVKL--FAIEEETTTRHKVLIMEFCPCGSL 96
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 18/128 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + G+G A K +K L R V+ EV+ L
Sbjct: 13 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTG 214
++ HPN++ L +L+ E ++ G L + L + ++ + F L +IL G
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF---LKQILDG 120
Query: 215 RRSMDKKR 222
+ KR
Sbjct: 121 VHYLHSKR 128
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 11/121 (9%)
Query: 82 QFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQ 141
+F + N+ LG+G F V + +G+ A K + L
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLS 68
Query: 142 GH--REWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKS 199
++ E +L HPN+V+L E+ LV++ +T G L + R S++
Sbjct: 69 ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA 128
Query: 200 D 200
D
Sbjct: 129 D 129
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDF 152
+F P +G GGFG VF+ A+K ++ + RE V EV
Sbjct: 7 DFEPIQCMGRGGFGVVFEA---------KNKVDDCNYAIKRIRLPNRELAREKVMREVKA 57
Query: 153 LGQLHHPNLVKLIGYCIE 170
L +L HP +V+ +E
Sbjct: 58 LAKLEHPGIVRYFNAWLE 75
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV-AEVDFLGQLHHP 159
LG G FG V +EE SG+ +K++ D Q E + AE++ L L HP
Sbjct: 30 LGSGAFGDV--HLVEERS-------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 160 NLVKLI 165
N++K+
Sbjct: 81 NIIKIF 86
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 190 LFRRHLTSKSDVYSFGVVLLEILTG 214
+F+R +T K D++S GVV+ +LTG
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV- 147
K+ F +LG+G FG VF +++ + A+ A+K LK L+ R+ V
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQ----LYAMKVLKKATLKV-RDRVR 72
Query: 148 --AEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRHLTSKSDV 201
E D L +++HP +VKL Y + + +L L+ +F+ G L L + + ++ DV
Sbjct: 73 TKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 192 RRHLTSKSDVYSFGVVLLEILTG 214
RR T +D +SFGV++ E+LTG
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV- 147
K+ F +LG+G FG VF +++ + A+ A+K LK L+ R+ V
Sbjct: 21 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQ----LYAMKVLKKATLKV-RDRVR 73
Query: 148 --AEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRHLTSKSDV 201
E D L +++HP +VKL Y + + +L L+ +F+ G L L + + ++ DV
Sbjct: 74 TKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 129
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 192 RRHLTSKSDVYSFGVVLLEILTG 214
RR T +D +SFGV++ E+LTG
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKNSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL 99
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV- 147
K+ F +LG+G FG VF +++ + A+ A+K LK L+ R+ V
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQ----LYAMKVLKKATLKV-RDRVR 72
Query: 148 --AEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRHLTSKSDV 201
E D L +++HP +VKL Y + + +L L+ +F+ G L L + + ++ DV
Sbjct: 73 TKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 192 RRHLTSKSDVYSFGVVLLEILTG 214
RR T +D +SFGV++ E+LTG
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
+L HPN+V+L E+ LV++ +T G L + R S++D
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 106
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 18/128 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + G+G A K +K L R V+ EV+ L
Sbjct: 20 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTG 214
++ HPN++ L +L+ E ++ G L + L + ++ + F L +IL G
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF---LKQILDG 127
Query: 215 RRSMDKKR 222
+ KR
Sbjct: 128 VHYLHSKR 135
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK-----SLKPDGLQGHREW 146
GN+R +G+G F V +G VA+K L P LQ +
Sbjct: 14 IGNYRLLKTIGKGNFAKV---------KLARHILTGREVAIKIIDKTQLNPTSLQ---KL 61
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV + L+HPN+VKL + L+ E+ + G + ++L
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 105
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 123 KPGSGITVAVKSLKPDGLQGHREWVA------EVDFLGQLHHPNLVKLIGYCIEDDQRLL 176
+ G+G A K +K L R V+ EV+ L ++ HPN++ L +L
Sbjct: 47 QKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 106
Query: 177 VYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTGRRSMDKKR 222
+ E ++ G L + L + ++ + F L +IL G + KR
Sbjct: 107 ILELVSGGELFDFLAEKESLTEDEATQF---LKQILDGVHYLHSKR 149
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK-----SLKPDGLQGHREW 146
GN+R +G+G F V +G VA+K L P LQ +
Sbjct: 11 IGNYRLLKTIGKGNFAKV---------KLARHILTGREVAIKIIDKTQLNPTSLQ---KL 58
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV + L+HPN+VKL + L+ E+ + G + ++L
Sbjct: 59 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL 102
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 73
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 116
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
+L HPN+V+L E+ LV++ +T G L + R S++D
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 105
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
+L HPN+V+L E+ LV++ +T G L + R S++D
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 106
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSL 186
E+ + QLHHP L+ L + + +L+ EF++ G L
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAVK + L ++ E
Sbjct: 13 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHL 190
V + L+HPN+VKL IE ++ L LV E+ + G + ++L
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 82
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 125
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAVK + L ++ E
Sbjct: 13 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
V + L+HPN+VKL + LV E+ + G + ++L
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR 216
T KSDV+SFG++L+EI+T R
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGR 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAVK + L ++ E
Sbjct: 13 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHL 190
V + L+HPN+VKL IE ++ L LV E+ + G + ++L
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYL 104
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 17/90 (18%)
Query: 197 SKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYS 256
SK+D++S G+ +E+ G + P +L K P LE NYS
Sbjct: 198 SKADIWSLGITAIELARGEPPHSELHPM--------KVLFLIPKNN-----PPTLEGNYS 244
Query: 257 LKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 286
+ + + CL+++P RP+ E++K
Sbjct: 245 ----KPLKEFVEACLNKEPSFRPTAKELLK 270
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG VFKG +N T I + + + +Q E+ L Q P
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPY 81
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTG 214
+ K G ++D + ++ E++ GS + L L D +L EIL G
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL----DETQIATILREILKG 131
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 82
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 125
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 17/90 (18%)
Query: 197 SKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYS 256
SK+D++S G+ +E+ G + P +L K P LE NYS
Sbjct: 203 SKADIWSLGITAIELARGEPPHSELHP--------MKVLFLIPKNN-----PPTLEGNYS 249
Query: 257 LKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 286
+ + + CL+++P RP+ E++K
Sbjct: 250 ----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 17/86 (19%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREW--- 146
AT + P + +G G +G V+K P SG VA+KS++ P+G G
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 147 -VAEVDFLGQLH---HPNLVKLIGYC 168
V EV L +L HPN+V+L+ C
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVC 83
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 101
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 17/90 (18%)
Query: 197 SKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYS 256
SK+D++S G+ +E+ G + P +L K P LE NYS
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPM--------KVLFLIPKNN-----PPTLEGNYS 229
Query: 257 LKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 286
+ + + CL+++P RP+ E++K
Sbjct: 230 ----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 101
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAVK + L ++ E
Sbjct: 6 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 56
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHL 190
V + L+HPN+VKL IE ++ L LV E+ + G + ++L
Sbjct: 57 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYL 97
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 17/90 (18%)
Query: 197 SKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYS 256
SK+D++S G+ +E+ G + P +L K P LE NYS
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPM--------KVLFLIPKNN-----PPTLEGNYS 229
Query: 257 LKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 286
+ + + CL+++P RP+ E++K
Sbjct: 230 ----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 100
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 100
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR 216
T KSDV+SFG++L+EI+T R
Sbjct: 346 FTIKSDVWSFGILLMEIVTYGR 367
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 195 LTSKSDVYSFGVVLLEILTGRR 216
T KSDV+SFG++L+EI+T R
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGR 383
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 104
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 100
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 104
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 104
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGH-----REWVAEVDFLG 154
+GEG +G VFK +NG G VA+K ++ G +G RE VA + L
Sbjct: 19 IGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLE 69
Query: 155 QLHHPNLVKLIGYC 168
HPN+V+L C
Sbjct: 70 TFEHPNVVRLFDVC 83
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 205 QSDVYAFGIVLYELMTGQ 222
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V+KG W +G K + V + P LQ + EV L + H
Sbjct: 32 IGSGSFGTVYKGKW---HGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHV 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N++ +GY Q +V ++ SL +HL
Sbjct: 81 NILLFMGYSTA-PQLAIVTQWCEGSSLYHHL 110
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 205 QSDVYAFGIVLYELMTGQ 222
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V+KG W +G K + V + P LQ + EV L + H
Sbjct: 32 IGSGSFGTVYKGKW---HGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHV 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N++ +GY + Q +V ++ SL +HL
Sbjct: 81 NILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 110
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
+F+ ++G GGFG VFK G T +K +K + + R EV L
Sbjct: 12 DFKEIELIGSGGFGQVFKA---------KHRIDGKTYVIKRVKYNNEKAER----EVKAL 58
Query: 154 GQLHHPNLVKLIG 166
+L H N+V G
Sbjct: 59 AKLDHVNIVHYNG 71
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 193 QSDVYAFGIVLYELMTGQ 210
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V+KG W +G K + V + P LQ + EV L + H
Sbjct: 20 IGSGSFGTVYKGKW---HGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHV 68
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
N++ +GY + Q +V ++ SL +HL
Sbjct: 69 NILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 98
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 55
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 98
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 217 QSDVYAFGIVLYELMTGQ 234
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 93
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY + Q +V ++ SL +HL
Sbjct: 94 ILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 122
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 209 QSDVYAFGIVLYELMTGQ 226
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 36 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 85
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY + Q +V ++ SL +HL
Sbjct: 86 ILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 114
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 216 QSDVYAFGIVLYELMTGQ 233
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 43 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 92
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY + Q +V ++ SL +HL
Sbjct: 93 ILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 121
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY + Q +V ++ SL +HL
Sbjct: 66 ILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 94
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 194 QSDVYAFGIVLYELMTGQ 211
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY + Q +V ++ SL +HL
Sbjct: 71 ILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 99
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 191 QSDVYAFGIVLYELMTGQ 208
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 18 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 67
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY + Q +V ++ SL +HL
Sbjct: 68 ILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 96
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 194 QSDVYAFGIVLYELMTGQ 211
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY + Q +V ++ SL +HL
Sbjct: 71 ILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 99
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY Q +V ++ SL +HL
Sbjct: 66 ILLFMGYSTA-PQLAIVTQWCEGSSLYHHL 94
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG--HREWV 147
S T ++ LG+G F V + K +G A K + L H++
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLE 51
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
E L HPN+V+L E+ LV++ +T G L + R S++D
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 104
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 128 ITVAVKSLKPDGLQGHREWVA-EVDFLGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGS 185
+ V + L P+ L+ RE E L Q+ HP+++ LI LV++ M +G
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 186 LENHLFRRHLTSKSDVYSFGVVLLEILT 213
L ++L + S+ + S LLE ++
Sbjct: 187 LFDYLTEKVALSEKETRSIMRSLLEAVS 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 217 QSDVYAFGIVLYELMTGQ 234
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 93
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY + Q +V ++ SL +HL
Sbjct: 94 ILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 122
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 17/18 (94%)
Query: 198 KSDVYSFGVVLLEILTGR 215
+SDVY+FG+VL E++TG+
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
++ +GY + Q +V ++ SL +HL
Sbjct: 66 ILLFMGYSTK-PQLAIVTQWCEGSSLYHHL 94
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGH-----REWVAEVDFLG 154
+GEG +G VFK +NG G VA+K ++ G +G RE VA + L
Sbjct: 19 IGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLE 69
Query: 155 QLHHPNLVKLIGYC 168
HPN+V+L C
Sbjct: 70 TFEHPNVVRLFDVC 83
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG------LQGHREWVAEVDFLG 154
+GEG +G VFK +NG G VA+K ++ L RE VA + L
Sbjct: 19 IGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLE 69
Query: 155 QLHHPNLVKLIGYC 168
HPN+V+L C
Sbjct: 70 TFEHPNVVRLFDVC 83
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAV+ + L ++ E
Sbjct: 13 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFRE 63
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHL 190
V + L+HPN+VKL IE ++ L LV E+ + G + ++L
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYL 104
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAV+ + L ++ E
Sbjct: 13 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFRE 63
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
V + L+HPN+VKL + LV E+ + G + ++L
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 60
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 103
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G F V + G + + K + H++ E L HPN
Sbjct: 19 LGKGAFSVVRR-------CVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
+V+L E+ L+++ +T G L + R S++D
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD 111
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 12/103 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG--HREWV 147
S T ++ LG+G F V + K +G A K + L H++
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLE 51
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
E L HPN+V+L E+ LV++ +T G L + R S++D
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 104
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
++ +G G +G V + G+ I A K + ++ + E++ + L
Sbjct: 14 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
HPN+++L ++ LV E T G L + + + +SD
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 107
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
++ +G G +G V + G+ I A K + ++ + E++ + L
Sbjct: 31 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
HPN+++L ++ LV E T G L + + + +SD
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 124
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
+F+ ++G GGFG VFK G T ++ +K + + R EV L
Sbjct: 13 DFKEIELIGSGGFGQVFKA---------KHRIDGKTYVIRRVKYNNEKAER----EVKAL 59
Query: 154 GQLHHPNLVKLIG 166
+L H N+V G
Sbjct: 60 AKLDHVNIVHYNG 72
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
L HPN+V+L E+ L+++ +T G L + R S++D
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD 122
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 10/119 (8%)
Query: 85 FQELKSAT---GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQ 141
FQ + + T +++ LG+G F V + P + + K +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRR-------CVKKTPTQEYAAKIINTKKLSAR 72
Query: 142 GHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
H++ E L HPN+V+L E+ LV++ +T G L + R S++D
Sbjct: 73 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD 131
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 263 VSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 293
VS+L C + DP RP D +V +L QD
Sbjct: 240 VSKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N+ P ILG G V + + A +T S + +Q RE + EVD
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGG-GSFSAEEVQELREATLKEVDI 76
Query: 153 LGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEI 211
L ++ HPN+++L + LV++ M +G L ++L + S+ + LLE+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 212 LTGRRSMD 219
+ ++
Sbjct: 137 ICALHKLN 144
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGV 206
+ EV L L HPN++KL + + LV E G L + + R ++ D V
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA---AV 140
Query: 207 VLLEILTGRRSMDK----KRPSGEQNLVAWARQYLADKRKLYQIVD 248
++ ++L+G + K R +NL+ +++ K L +IVD
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE----KDALIKIVD 182
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL--KPDGLQGHREWVAEVDFLGQLHH 158
+GEG +G VFK + G VA+K D + + E+ L QL H
Sbjct: 11 IGEGSYGVVFKCRNRDTGQ---------IVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 159 PNLVKLIGYCIEDDQRLLVYEF 180
PNLV L+ + LV+E+
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEY 83
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N+ P ILG G V + + A +T S + +Q RE + EVD
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGG-GSFSAEEVQELREATLKEVDI 76
Query: 153 LGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEI 211
L ++ HPN+++L + LV++ M +G L ++L + S+ + LLE+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 212 LTGRRSMD 219
+ ++
Sbjct: 137 ICALHKLN 144
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N+ P ILG G V + + A +T S + +Q RE + EVD
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGG-GSFSAEEVQELREATLKEVDI 63
Query: 153 LGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEI 211
L ++ HPN+++L + LV++ M +G L ++L + S+ + LLE+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 212 LTGRRSMD 219
+ ++
Sbjct: 124 ICALHKLN 131
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG+GG+G VF+ + + A + V K++ + AE + L ++ HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 160 NLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFR 192
+V LI Y + +L L+ E+++ G L L R
Sbjct: 82 FIVDLI-YAFQTGGKLYLILEYLSGGELFMQLER 114
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 195 LTSKSDVYSFGVVLLEILTG 214
+ ++SDVYS G VL E+LTG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 195 LTSKSDVYSFGVVLLEILTG 214
+ ++SDVYS G VL E+LTG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG+GG+G VF+ + + A + V K++ + AE + L ++ HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 160 NLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFR 192
+V LI Y + +L L+ E+++ G L L R
Sbjct: 82 FIVDLI-YAFQTGGKLYLILEYLSGGELFMQLER 114
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 195 LTSKSDVYSFGVVLLEILTG 214
+ ++SDVYS G VL E+LTG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 195 LTSKSDVYSFGVVLLEILTG 214
+ ++SDVYS G VL E+LTG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAVK + L ++ E
Sbjct: 13 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
V L+HPN+VKL + LV E+ + G + ++L
Sbjct: 64 VRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL 104
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 195 LTSKSDVYSFGVVLLEILTG 214
+ ++SDVYS G VL E+LTG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 195 LTSKSDVYSFGVVLLEILTG 214
+ ++SDVYS G VL E+LTG
Sbjct: 213 VDARSDVYSLGCVLYEVLTG 232
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 17/96 (17%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK----PDGLQGHRE 145
++ +R + LGEG +G V+K + TVA+K ++ +G+ G
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKA---------IDTVTNETVAIKRIRLEHEEEGVPGTA- 80
Query: 146 WVAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEF 180
+ EV L +L H N+++L I + RL L++E+
Sbjct: 81 -IREVSLLKELQHRNIIELKS-VIHHNHRLHLIFEY 114
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWVAEVDFLGQLH 157
LG+G FG V+ + S +A+K L L+ + EV+ L
Sbjct: 20 LGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN+++L GY + + L+ E+ G++ L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL 103
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWVAEVDFLGQLH 157
LG+G FG V+ + S +A+K L L+ + EV+ L
Sbjct: 20 LGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
HPN+++L GY + + L+ E+ G++ L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL 103
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 18/128 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSDVYSFGVVLLEILTG 214
Q+ HPN++ L +L+ E ++ G L + L ++ S+ + SF + +IL G
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF---IKQILDG 127
Query: 215 RRSMDKKR 222
+ K+
Sbjct: 128 VNYLHTKK 135
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL 190
EV+ L HPN+++L GY + + L+ E+ G++ L
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 96
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-----EVDFLGQ 155
+GEG +G V+K A+ G T A+K ++ L+ E + E+ L +
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFM 181
L H N+VKL + +LV+E +
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHL 82
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-----EVDFLGQ 155
+GEG +G V+K A+ G T A+K ++ L+ E + E+ L +
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFM 181
L H N+VKL + +LV+E +
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHL 82
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-----EVDFLGQ 155
+GEG +G V+K A+ G T A+K ++ L+ E + E+ L +
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFM 181
L H N+VKL + +LV+E +
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHL 82
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 45/109 (41%), Gaps = 19/109 (17%)
Query: 87 ELKS-ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK-SLKP-----DG 139
E+KS T F +G G FG VFK K G A+K S KP D
Sbjct: 2 EMKSRYTTEFHELEKIGSGEFGSVFKC---------VKRLDGCIYAIKRSKKPLAGSVDE 52
Query: 140 LQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
RE A LGQ H ++V+ EDD L+ E+ GSL +
Sbjct: 53 QNALREVYAHA-VLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLAD 98
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 159 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
+V++ + D+ +V EF+ G+L +
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTD 237
>pdb|2OU2|A Chain A, Acetyltransferase Domain Of Human Hiv-1 Tat Interacting
Protein, 60kda, Isoform 3
Length = 280
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 63/167 (37%), Gaps = 39/167 (23%)
Query: 175 LLVYEFMTRGSLENHLFRRHLTS-------KSDVYSFGVVLLEILTGRRSMDKKRPSGEQ 227
L + EF + +RHLT +++Y G + + GR K S Q
Sbjct: 34 LYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFFEIDGR-----KNKSYSQ 88
Query: 228 NLVAWARQYLADKRKLYQIVDPRL---ELNYSLKGVQKVSQLA--------YNC---LSR 273
NL A+ +L D LY DP L Y KG V + YN L+
Sbjct: 89 NLCLLAKCFL-DHXTLYYDTDPFLFYVMTEYDCKGFHIVGYFSKEKESTEDYNVACILTL 147
Query: 274 DPKSRPSMDEVV------------KVLTPLQDLNDLAILSYHSRLSQ 308
P R +++ K TP + L+DL +LSY S SQ
Sbjct: 148 PPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRSYWSQ 194
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAEVDFLGQL 156
+GEG +G VFK E VA+K ++ D G+ + E+ L +L
Sbjct: 10 IGEGTYGTVFKAKNRETHE---------IVALKRVRLDDDDEGVPSSA--LREICLLKEL 58
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEF 180
H N+V+L D + LV+EF
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEF 82
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + +G VAVK + Q EV + HH N
Sbjct: 53 IGEGSTGIV---------CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
+V + + D+ +V EF+ G+L +
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTD 131
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 17/85 (20%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-----EVDFLGQ 155
+GEG +G VFK E T + +LK L E V E+ L +
Sbjct: 10 IGEGTYGTVFKAKNRE------------THEIVALKRVRLDDDDEGVPSSALREICLLKE 57
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEF 180
L H N+V+L D + LV+EF
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEF 82
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 37 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
+V++ + D+ +V EF+ G+L +
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTD 115
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 39 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
+V++ + D+ +V EF+ G+L +
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTD 117
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEV 150
NF +LG+G FG V ++E G AVK LK D + + + E
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGD---------LYAVKVLKKDVILQDDDVECTMTEK 74
Query: 151 DFLGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRHLTSKSDVYSFGVV 207
L +HP L +L D+ V EF+ G L H+ RR +++ Y+ ++
Sbjct: 75 RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEII 134
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 28 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
+V++ + D+ +V EF+ G+L +
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTD 106
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 82 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
+V++ + D+ +V EF+ G+L +
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTD 160
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 32 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
+V++ + D+ +V EF+ G+L +
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTD 110
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRHLTSKSD 200
E+ L +L HPN++KL + LV E +T G L + + + S+ D
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERD 149
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 10/134 (7%)
Query: 60 AHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPD-SILGEGGFGYVFKGWIEENG 118
AHL P D K + LQ+ + E + ++ D +LG GGFG VF ++ G
Sbjct: 152 AHLGQ-APFQEFLDSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATG 210
Query: 119 TAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LV 177
A + K G QG + E L ++H +V L Y E L LV
Sbjct: 211 KLYA---CKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSL-AYAFETKTDLCLV 263
Query: 178 YEFMTRGSLENHLF 191
M G + H++
Sbjct: 264 MTIMNGGDIRYHIY 277
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,478,846
Number of Sequences: 62578
Number of extensions: 438495
Number of successful extensions: 2570
Number of sequences better than 100.0: 548
Number of HSP's better than 100.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 1650
Number of HSP's gapped (non-prelim): 931
length of query: 343
length of database: 14,973,337
effective HSP length: 100
effective length of query: 243
effective length of database: 8,715,537
effective search space: 2117875491
effective search space used: 2117875491
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)