Your job contains 1 sequence.
>019261
MMETTQNSSNNSSSSATDPQQQQQQLSSWSSPHHHQFYHHHQQHQHHLWLDSYNNNNNNS
HHNPTLSFNLNSQHDATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQH
AEKYFPLGGGGADLGSSSSDKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKE
KRLDAGDVILFERHRTDSERLFIGWRRRGATAVAQVAQAGGAAAGGCGWPRGLYPNHPYP
VDVAHGHGVSAPLYQHAGSGVQSQTTSVGNSRTLRLFGVNLECQVDDKSEGSESQAEAHG
HQQFNYSVEAYDSNSTNRHNHVVGQFNCLCYRHGVIANKIMSN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019261
(343 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 437 7.7e-52 2
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 514 2.5e-49 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 475 3.4e-45 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 375 7.4e-40 2
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 378 4.0e-39 2
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 364 1.2e-37 2
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 350 6.0e-32 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 350 6.0e-32 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 320 6.9e-32 2
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 349 7.7e-32 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 341 5.4e-31 1
TAIR|locus:2015832 - symbol:AT1G50680 species:3702 "Arabi... 233 1.4e-22 2
TAIR|locus:2026058 - symbol:AT1G51120 species:3702 "Arabi... 237 5.7e-20 1
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 148 3.4e-09 2
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 159 6.9e-09 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 152 4.8e-08 1
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 151 5.1e-08 1
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 143 3.2e-07 2
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 138 1.4e-06 1
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 136 1.8e-06 2
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 136 2.5e-06 1
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 135 3.3e-06 1
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 137 4.2e-06 1
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 133 5.6e-06 1
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 128 1.3e-05 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 129 1.4e-05 2
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 131 1.6e-05 1
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 129 2.4e-05 1
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 125 5.0e-05 1
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 119 6.7e-05 2
UNIPROTKB|A4LBC0 - symbol:LFL1 "B3 domain-containing prot... 120 9.4e-05 1
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 122 0.00018 1
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 120 0.00024 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 114 0.00038 1
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 114 0.00082 1
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 437 (158.9 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 86/131 (65%), Positives = 92/131 (70%)
Query: 78 EAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXX 137
+ Q + N E EKE +FEKPLTPSDVGKLNRLVIPKQHAE+YFP
Sbjct: 18 QQQQQQQQHQNDVVE-EKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEK 76
Query: 138 XXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTD 197
FEDE GK WRFRYSYWNSSQSYVLTKGWSRYVKEK LDAGDV+LF RHR+D
Sbjct: 77 GLLLC----FEDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSD 132
Query: 198 SERLFIGWRRR 208
R FIGWRRR
Sbjct: 133 GGRFFIGWRRR 143
Score = 118 (46.6 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
Identities = 31/62 (50%), Positives = 38/62 (61%)
Query: 250 SAPLYQHAGS-GVQSQTTSVGNSRTLRLFGVNLECQVD-DKSEGSE---SQAEAHGHQQF 304
S Y HAG+ V+SQ GNS+TLRLFGVN+ECQ+D D SE S S H QF
Sbjct: 161 SLQYYPHAGAQAVESQR---GNSKTLRLFGVNMECQLDSDWSEPSTPDGSNTYTTNHDQF 217
Query: 305 NY 306
++
Sbjct: 218 HF 219
Score = 37 (18.1 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 292 SESQAEAHGHQQFNYSVEAY 311
S S ++++ H Q N S++ Y
Sbjct: 146 SSSSSDSYRHVQSNASLQYY 165
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 115/245 (46%), Positives = 138/245 (56%)
Query: 65 TLSFNLNSQHDATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKY 124
TL + T+ T + +L KE +FEK LTPSDVGKLNRLVIPKQHAEKY
Sbjct: 13 TLLWQQQQHRHTTDTSETTTTATWLHDDL-KESLFEKSLTPSDVGKLNRLVIPKQHAEKY 71
Query: 125 FPXXXXXXXXXXXXXXXXXXX---XFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEK 181
FP FEDESGK WRFRYSYWNSSQSYVLTKGWSR+VK+K
Sbjct: 72 FPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFVKDK 131
Query: 182 RLDAGDVILFERHRTDSERLFIGWRRRXXXXXXXXXXXXXXXXXXCGWPRGLYPNHPYPV 241
+LD GDV+ F+RHR+DS RLFIGWRRR G H
Sbjct: 132 QLDPGDVVFFQRHRSDSRRLFIGWRRRGQGSSSSVAATNSAVNTSS---MGALSYHQIHA 188
Query: 242 DVAHGHGVSAPLYQHAGSGVQS--QTTS------VGNSRTLRLFGVNLECQVDDKSEGSE 293
+ + S Y H G+ V + +T S VG+SRT+RLFGVNLECQ+D+ ++G +
Sbjct: 189 TSNYSNPPSHSEYSHYGAAVATAAETHSTPSSSVVGSSRTVRLFGVNLECQMDE-NDGDD 247
Query: 294 SQAEA 298
S A A
Sbjct: 248 SVAVA 252
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 108/205 (52%), Positives = 120/205 (58%)
Query: 94 EKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXX----XFED 149
++E +FEK LTPSDVGKLNRLVIPKQHAEKYFP FED
Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED 83
Query: 150 ESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRRRX 209
ESGKCW+FRYSYWNSSQSYVLTKGWSRYVK+K LDAGDV+ F+RHR D RLFIGWRRR
Sbjct: 84 ESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRG 143
Query: 210 XXXXXXXXXXXXXXX---XXCGWPRGLYPNHPY-PVDVAHGHGVSAPLYQHAGSGV---Q 262
W GL PY V + + Y H G+ V Q
Sbjct: 144 EASSSPAVSVVSQEALVNTTAYWS-GL--TTPYRQVHASTTYPNIHQEYSHYGAVVDHAQ 200
Query: 263 SQTTSV-GNSRTLRLFGVNLECQVD 286
S V G+SRT+RLFGVNLEC D
Sbjct: 201 SIPPVVAGSSRTVRLFGVNLECHGD 225
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 375 (137.1 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 77/143 (53%), Positives = 95/143 (66%)
Query: 69 NLNSQHDATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXX 128
+L D EA+P+ +E ++E MF+K +TPSDVGKLNRLVIPKQHAE++FP
Sbjct: 6 SLTRDEDEEEAKPLAEEEGAREVA-DREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLD 64
Query: 129 XXXXXXXXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDV 188
FED +GK WRFRYSYWNSSQSYV+TKGWSR+VK+K+LDAGD+
Sbjct: 65 SSSNEKGLLLN-------FEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDI 117
Query: 189 ILFERHRTDS---ERLFIGWRRR 208
+ F+R DS RLFI WRRR
Sbjct: 118 VSFQRCVGDSGRDSRLFIDWRRR 140
Score = 66 (28.3 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 250 SAPLYQHAGSGVQSQTTSVGNSRTLRLFGVNLECQVDDKSEGSESQAEAHG 300
S P+ H G Q + G + LRLFGV++EC + +E ++ + G
Sbjct: 219 SVPVMMH-GRANQELVGTAG--KRLRLFGVDMECGESGMTNSTEEESSSSG 266
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 378 (138.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 69/116 (59%), Positives = 85/116 (73%)
Query: 93 LEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESG 152
+E+E MF+K +TPSDVGKLNRLVIPKQHAE+YFP FED SG
Sbjct: 17 MEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLN----FEDRSG 72
Query: 153 KCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRRR 208
WRFRYSYWNSSQSYV+TKGWSR+VK+K+LDAGD++ F+R + ++L+I WRRR
Sbjct: 73 NSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRR 128
Score = 56 (24.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 250 SAPLYQHAGSGVQSQTTSVGNSRTLRLFGVNLECQVDDKSEGS-ESQAEAHG 300
S P+ + V S S G R LRLFGV++EC S S E ++ + G
Sbjct: 193 SVPVMMQRRAQVASMA-SRGEKR-LRLFGVDMECGGGGGSVNSTEEESSSSG 242
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 364 (133.2 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 77/146 (52%), Positives = 94/146 (64%)
Query: 66 LSFNLNSQHDATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYF 125
L+ N+ + + + NL EKE MF+K +TPSDVGKLNRLVIPKQHAE+YF
Sbjct: 23 LTSNIGASSSSGPSGNNNNLPMMMIPPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYF 82
Query: 126 PXXXXXXXXXXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDA 185
P F+D +GK WRFRYSYWNSSQSYV+TKGWSR+VKEK+LDA
Sbjct: 83 PLDSSNNQNGTLLN-------FQDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDA 135
Query: 186 GDVILFERHRTD-SER--LFIGWRRR 208
GD++ F+R D SER L+I WR R
Sbjct: 136 GDIVSFQRGIGDESERSKLYIDWRHR 161
Score = 56 (24.8 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 272 RTLRLFGVNLECQVDDKSEGSES 294
+ LRLFGVN+EC +D ++ ES
Sbjct: 282 KRLRLFGVNMECG-NDYNQQEES 303
Score = 37 (18.1 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 295 QAEAHGHQQFNYSVEAYDSNSTNRHNHVVGQFNCLCYRHGV-IAN 338
QA G+ FN++ S +NR H + ++N + G+ I N
Sbjct: 168 QAHQFGNFGFNFNFPT-TSQYSNRF-HPLPEYNSVPIHRGLNIGN 210
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 68/113 (60%), Positives = 78/113 (69%)
Query: 96 EPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCW 155
E +FEK +TPSDVGKLNRLVIPK HAEK+FP FED +GK W
Sbjct: 185 EALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLN------FEDVNGKVW 238
Query: 156 RFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRRR 208
RFRYSYWNSSQSYVLTKGWSR+VKEK L AGDV+ F R ++L+IGW+ R
Sbjct: 239 RFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSR 291
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 68/115 (59%), Positives = 78/115 (67%)
Query: 95 KEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXX-XXXXXXXFEDESGK 153
+E +FEK +TPSDVGKLNRLVIPKQHAEK+FP ED +GK
Sbjct: 191 REVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGK 250
Query: 154 CWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRRR 208
WRFRYSYWNSSQSYVLTKGWSR+VKEK L AGDV+ FER +L+I W+ R
Sbjct: 251 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVR 305
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 320 (117.7 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 72/149 (48%), Positives = 90/149 (60%)
Query: 70 LNSQHDATEAQPMTNLNSNQEQELEK-EPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXX 128
+N + E + ++ ++N E+ E MF+K LTPSDVGKLNRLVIPKQHAE +FP
Sbjct: 6 MNLDQELAEIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLE 65
Query: 129 XXXXXXXXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDV 188
F+D++GK WRFRYSYWNSSQSYV+TKGWSR+VKEK+L AGD
Sbjct: 66 DNQNGTVLD---------FQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDT 116
Query: 189 ILFER-----HRTDSER----LFIGWRRR 208
+ F R ER +FI WR R
Sbjct: 117 VSFYRGYIPDDNAQPERRRKIMFIDWRPR 145
Score = 45 (20.9 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 250 SAPLYQHAGSGVQSQTTSVGNSRTLRLFGVNLE 282
S P++ AG S ++ LRLFGV++E
Sbjct: 238 SVPVFP-AGRVPPSAPPQPSTTKKLRLFGVDVE 269
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 72/134 (53%), Positives = 86/134 (64%)
Query: 75 DATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXX 134
DA + ++ N + +E +FEK +TPSDVGKLNRLVIPKQHAEK+FP
Sbjct: 164 DANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAV 223
Query: 135 XXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERH 194
FED +GK WRFRYSYWNSSQSYVLTKGWSR+VKEK L AGDV+ FER
Sbjct: 224 TKGVLIN-----FEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERS 278
Query: 195 RTDSERLFIGWRRR 208
+L+I W+ R
Sbjct: 279 TGLERQLYIDWKVR 292
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 67/113 (59%), Positives = 78/113 (69%)
Query: 96 EPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCW 155
E +FEK +TPSDVGKLNRLVIPK AEK+FP FED +GK W
Sbjct: 180 ELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLN----FEDVNGKVW 235
Query: 156 RFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRRR 208
RFRYSYWNSSQSYVLTKGWSR+VKEKRL AGD+I F+R ++ FIGW+ +
Sbjct: 236 RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSK 288
>TAIR|locus:2015832 [details] [associations]
symbol:AT1G50680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PRINTS:PR00367
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC079279 HSSP:Q9ZWM9 KO:K09287 EMBL:AY560882
IPI:IPI00527323 PIR:E96543 RefSeq:NP_175483.1 UniGene:At.50579
ProteinModelPortal:Q9C6P5 SMR:Q9C6P5 PaxDb:Q9C6P5 PRIDE:Q9C6P5
EnsemblPlants:AT1G50680.1 GeneID:841490 KEGG:ath:AT1G50680
TAIR:At1g50680 eggNOG:NOG331833 HOGENOM:HOG000090522
InParanoid:Q9C6P5 OMA:GEVNQES PhylomeDB:Q9C6P5
ProtClustDB:CLSN2682911 Genevestigator:Q9C6P5 Uniprot:Q9C6P5
Length = 337
Score = 233 (87.1 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 50/110 (45%), Positives = 62/110 (56%)
Query: 88 NQEQE--LEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXX 145
NQE + +F+K LTPSDVGKLNRLVIPK++A KY P
Sbjct: 144 NQESDKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVE 203
Query: 146 XFE----DESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILF 191
E D + + W+FRY YW SSQS+V T+GW+ +VKEK L DVI F
Sbjct: 204 DVEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAF 253
Score = 43 (20.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 264 QTTSVGNSRTLRLFGVNLEC 283
+T S N LFGV +EC
Sbjct: 317 ETKSEENKGGFMLFGVRIEC 336
>TAIR|locus:2026058 [details] [associations]
symbol:AT1G51120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC079828
HSSP:Q9ZWM9 KO:K09287 HOGENOM:HOG000090522 ProtClustDB:CLSN2682911
EMBL:AY560883 IPI:IPI00548594 PIR:F96548 RefSeq:NP_175524.1
UniGene:At.50656 ProteinModelPortal:Q9C688 SMR:Q9C688 PRIDE:Q9C688
DNASU:841535 EnsemblPlants:AT1G51120.1 GeneID:841535
KEGG:ath:AT1G51120 TAIR:At1g51120 eggNOG:NOG252474
InParanoid:Q9C688 OMA:EEMKTET PhylomeDB:Q9C688
Genevestigator:Q9C688 Uniprot:Q9C688
Length = 352
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 46/95 (48%), Positives = 59/95 (62%)
Query: 98 MFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXX-FEDESGKCWR 156
+F+K LTPSDVGKLNRLVIPK++A KY P F D + + W+
Sbjct: 177 LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWK 236
Query: 157 FRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILF 191
FRY YW SSQS+V T+GW+ +VKEK L D+I+F
Sbjct: 237 FRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVF 271
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 148 (57.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 44/141 (31%), Positives = 68/141 (48%)
Query: 69 NLNSQHDATEA--QPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFP 126
+L+ ++DA P ++ N N + EK F K LT SD +P+ AE FP
Sbjct: 86 DLDLENDAVLGLTPPSSDGNGNGK---EKPASFAKTLTQSDANNGGGFSVPRYCAETIFP 142
Query: 127 XXXXXXXXXXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAG 186
+D G+ W+FR+ Y + + ++LT GWS +V +K+L AG
Sbjct: 143 RLDYSAEPPVQTVIA------KDIHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAG 196
Query: 187 DVILFERHRTDSERLFIGWRR 207
D I+F R ++S L +G RR
Sbjct: 197 DSIVFLR--SESGDLCVGIRR 215
Score = 54 (24.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 236 NHPYPV-DVAHGHGVSAPLYQHAGSGVQSQTTSVGNSRTLR--LFG--VNLECQVDDKSE 290
+H Y D + + +S L + VQ + SVG+ +T + LFG + E QV ++
Sbjct: 491 HHHYQARDSENSNNISCSLTMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNRKR 550
Query: 291 GSESQAEA 298
E +AEA
Sbjct: 551 FLEEEAEA 558
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 159 (61.0 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 41/114 (35%), Positives = 63/114 (55%)
Query: 97 PMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCWR 156
P+FEK L+ SD G++ RLV+PK AE YFP +D GK W
Sbjct: 284 PLFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLK---------IQDIKGKEWV 334
Query: 157 FRYSYW--NSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSE-RLFIGWRR 207
F++ +W N+S+ YVL +G + ++ +L AGD + F R T+ E +L +G+R+
Sbjct: 335 FQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDTVTFSR--TEPEGKLVMGYRK 385
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 152 (58.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 39/113 (34%), Positives = 58/113 (51%)
Query: 97 PMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCWR 156
P+FEK L+ SD G++ RLV+PK AE YFP +D G+ W
Sbjct: 293 PLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLK---------IQDVRGREWT 343
Query: 157 FRYSYW--NSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRR 207
F++ YW N+S+ YVL +G + ++ L AGD + F R +L +G R+
Sbjct: 344 FQFRYWPNNNSRMYVL-EGVTPCIQSMMLQAGDTVTFSRVDPGG-KLIMGSRK 394
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 151 (58.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 39/118 (33%), Positives = 55/118 (46%)
Query: 90 EQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFED 149
E EK P F K LT SD +P+ AE FP +D
Sbjct: 111 ESNSEKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILA------KD 164
Query: 150 ESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRR 207
G W+FR+ Y + + ++LT GWS +V +K+L AGD I+F R ++ L +G RR
Sbjct: 165 VHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMR--AENGDLCVGIRR 220
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 143 (55.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 43/133 (32%), Positives = 58/133 (43%)
Query: 75 DATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXX 134
D T+ T N NQ + L F K LT SD +PK+HA + P
Sbjct: 105 DTTQVVIPTQ-NENQFRPLVNS--FTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPL 161
Query: 135 XXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERH 194
D G WRF ++Y + Q ++LT GW+ + K+L AGDVI+F R
Sbjct: 162 PAQELLAI------DLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRG 215
Query: 195 RTDSERLFIGWRR 207
T R +G RR
Sbjct: 216 ETGELR--VGIRR 226
Score = 39 (18.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 330 CYRHGVIAN 338
C RHGV+A+
Sbjct: 243 CMRHGVVAS 251
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 95 KEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKC 154
K F K LTPSD +P+ A+ FP D G
Sbjct: 115 KVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVT------DIHGAV 168
Query: 155 WRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRR 207
W FR+ Y + + ++LT GWS++V K+L AGD ++F R D +FIG RR
Sbjct: 169 WDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADE--MFIGVRR 219
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 136 (52.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 43/133 (32%), Positives = 58/133 (43%)
Query: 75 DATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXX 134
D T+ T + NQ + L F K LT SD +PK+HA + P
Sbjct: 105 DTTQVVIPTQ-SENQFRPLVNS--FTKVLTASDTSAYGGFFVPKKHAIECLPPLPLPAQE 161
Query: 135 XXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERH 194
+D G WRFR+SY + Q + LT GW+ + K+L GDVI+F R
Sbjct: 162 LLA----------KDLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRG 211
Query: 195 RTDSERLFIGWRR 207
T R +G RR
Sbjct: 212 ETGELR--VGIRR 222
Score = 40 (19.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 330 CYRHGVIAN 338
C RHGVIA+
Sbjct: 239 CMRHGVIAS 247
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 136 (52.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 43/133 (32%), Positives = 58/133 (43%)
Query: 75 DATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXX 134
D T+ T N NQ + L F K LT SD +PK+HA + P
Sbjct: 105 DTTQVVIPTQ-NQNQFRPLVNS--FTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPL 161
Query: 135 XXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERH 194
D G WRFR+ Y ++Q ++LT GW+ + K+L GDVI+F R
Sbjct: 162 PTQEILAI------DLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRG 215
Query: 195 RTDSERLFIGWRR 207
T R +G RR
Sbjct: 216 ETGELR--VGIRR 226
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 43/133 (32%), Positives = 58/133 (43%)
Query: 75 DATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXX 134
D T+ T N NQ + L F K LT SD +PK+HA + P
Sbjct: 105 DTTQVVIPTQ-NENQFRPLVNS--FTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPL 159
Query: 135 XXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERH 194
D G WRF ++Y + Q ++LT GW+ + K+L AGDVI+F R
Sbjct: 160 PTQELLAT------DLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRG 213
Query: 195 RTDSERLFIGWRR 207
T R +G RR
Sbjct: 214 ETGELR--VGIRR 224
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 40/125 (32%), Positives = 57/125 (45%)
Query: 85 LNSNQEQELEKEP--MFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXX 142
L S+ +L ++P F K LT SD +P++ AEK FP
Sbjct: 110 LASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVA- 168
Query: 143 XXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLF 202
+D W FR+ Y + ++LT GWS +V KRL AGD +LF R + +L
Sbjct: 169 -----KDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRD--EKSQLM 221
Query: 203 IGWRR 207
+G RR
Sbjct: 222 LGIRR 226
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 133 (51.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 37/110 (33%), Positives = 51/110 (46%)
Query: 98 MFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCWRF 157
MF K LT SD +P++ AE FP D G WRF
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLA------RDLHGLEWRF 211
Query: 158 RYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRR 207
R+ Y + ++LT GWS +V +K+L +GD +LF R D +L +G RR
Sbjct: 212 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRG--DDGKLRLGVRR 259
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 73 QHDATEAQPMTNLNSNQEQEL---EKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXX 129
Q A+E M++ ++N E + K LT SDVG + R+V+PK+ AE + P
Sbjct: 268 QTPASEPSSMSHNSANSTIRFNCREYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALH 327
Query: 130 XXXXXXXXXXXXXXXXXFEDESGKCWRFRYSYW--NSSQSYVLTKGWSRYVKEKRLDAGD 187
F+ E+ W F+Y +W N S+ YVL + +VK+ L GD
Sbjct: 328 QREGVMLKMDD------FKLET--TWNFKYRFWPNNKSRMYVL-ESTGGFVKQHVLQTGD 378
Query: 188 VILFERHRTDSERLFI 203
+ + + ++SE+L +
Sbjct: 379 IFIIYKS-SESEKLVV 393
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 129 (50.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 35/109 (32%), Positives = 48/109 (44%)
Query: 99 FEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCWRFR 158
F K LT SD +PK+HA + P D WRFR
Sbjct: 126 FTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAID---LHDNQ---WRFR 179
Query: 159 YSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRR 207
++Y + Q + LT GW+ ++ K+L GDVI+F R T R +G RR
Sbjct: 180 HNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELR--VGIRR 226
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 330 CYRHGVIAN 338
C RHGVIA+
Sbjct: 243 CMRHGVIAS 251
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/139 (28%), Positives = 58/139 (41%)
Query: 69 NLNSQHDATEAQPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXX 128
+L H + P+ + + + E F K LT SD +P++ AEK FP
Sbjct: 129 SLQPVHSERDVFPVPDFGMLRGSKHPTE-FFCKTLTASDTSTHGGFSVPRRAAEKLFPPL 187
Query: 129 XXXXXXXXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDV 188
D W FR+ Y + ++LT GWS +V KRL AGD
Sbjct: 188 DYSAQPPTQELVV------RDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDS 241
Query: 189 ILFERHRTDSERLFIGWRR 207
+LF R + +L +G RR
Sbjct: 242 VLFIRD--EKSQLMVGVRR 258
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 36/114 (31%), Positives = 53/114 (46%)
Query: 95 KEPM--FEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESG 152
K+P F K LT SD +P++ AEK FP E
Sbjct: 120 KQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVE---- 175
Query: 153 KCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWR 206
W+FR+ + + ++LT GWS +V KRL AGD ++F R+ + +LF+G R
Sbjct: 176 --WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRN--EKNQLFLGIR 225
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 39/132 (29%), Positives = 58/132 (43%)
Query: 77 TEA-QPMTNLNSNQEQELEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXX 135
TE +PM+ S E + K F K LT SD + ++HA + P
Sbjct: 93 TEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTP 152
Query: 136 XXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHR 195
ED G W+F++ + + ++LT GWS +V KRL AGD +F R
Sbjct: 153 TQELVA------EDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG- 205
Query: 196 TDSERLFIGWRR 207
++ L +G RR
Sbjct: 206 -ENGELRVGVRR 216
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 119 (46.9 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 42/155 (27%), Positives = 62/155 (40%)
Query: 66 LSFNLNSQHDATEAQPMTNLNSNQEQE----LEK---EPM------FEKPLTPSDVGKLN 112
LS L ++H+ E L ++Q L+ EP F K LT SD
Sbjct: 99 LSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHG 158
Query: 113 RLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCWRFRYSYWNSSQSYVLTK 172
+ ++HA + P +E WRF++ + + ++LT
Sbjct: 159 GFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYE------WRFKHIFRGQPRRHLLTT 212
Query: 173 GWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRR 207
GWS +V KRL AGD +F R T R +G RR
Sbjct: 213 GWSTFVTSKRLVAGDAFVFLRGETGDLR--VGVRR 245
Score = 45 (20.9 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 259 SGVQSQTTSVGNSRTLRLFGVNLECQVDDKSEGSESQAEAHGHQQFNYSVEAYDSNSTN 317
SG+Q + T + + RLFG +L + + + Q + + + + D NS+N
Sbjct: 441 SGLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSN 499
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 120 (47.3 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 33/112 (29%), Positives = 52/112 (46%)
Query: 98 MFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCWRF 157
+ +K L SDV +L R+V+PK+ AE Y P ++ + W F
Sbjct: 180 ILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCMHDL-------QNAQLWTF 232
Query: 158 RYSYW--NSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRR 207
+Y YW N S+ YVL + YV+ L GD I+ + ++ R IG ++
Sbjct: 233 KYRYWPNNKSRMYVL-ENTGDYVRTHDLQLGDSIVIYKD-DENNRFVIGAKK 282
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 35/109 (32%), Positives = 49/109 (44%)
Query: 99 FEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCWRFR 158
F K LT SD +P++ AEK FP E W+FR
Sbjct: 129 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNE------WKFR 182
Query: 159 YSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRR 207
+ + + ++LT GWS +V KRL AGD +LF + D +L +G RR
Sbjct: 183 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--DKNQLLLGIRR 229
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 37/121 (30%), Positives = 53/121 (43%)
Query: 88 NQEQELEKEP-MFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXX 146
N +++ P MF K LT SD +P++ AE F
Sbjct: 165 NGSSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIA----- 219
Query: 147 FEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWR 206
+D G W+FR+ Y + ++LT GWS +V +K L +GD +LF R RL G R
Sbjct: 220 -KDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRL--GIR 276
Query: 207 R 207
R
Sbjct: 277 R 277
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 94 EKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGK 153
E + + K LT SDVG + R+V+PK+ AE P
Sbjct: 248 EYQVILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVT------- 300
Query: 154 CWRFRYSYW--NSSQSYVLTKGWSRYVKEKRLDAGDVILFERH 194
W+F+Y YW N S+ Y+L ++K L AGDVI+ ++
Sbjct: 301 -WKFKYRYWPNNKSRMYILDSA-GEFLKTHGLQAGDVIIIYKN 341
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 32/109 (29%), Positives = 45/109 (41%)
Query: 99 FEKPLTPSDVGKLNRLVIPKQHAEKYFPXXXXXXXXXXXXXXXXXXXXFEDESGKCWRFR 158
F K LT SD + ++HA + P FE WRF+
Sbjct: 128 FVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFE------WRFK 181
Query: 159 YSYWNSSQSYVLTKGWSRYVKEKRLDAGDVILFERHRTDSERLFIGWRR 207
+ + + ++LT GWS +V KRL AGD +F R R +G RR
Sbjct: 182 HIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLR--VGVRR 228
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 343 255 0.00085 114 3 11 22 0.49 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 614 (65 KB)
Total size of DFA: 222 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.45u 0.10s 21.55t Elapsed: 00:00:01
Total cpu time: 21.45u 0.10s 21.55t Elapsed: 00:00:01
Start: Sat May 11 06:27:08 2013 End: Sat May 11 06:27:09 2013