Query 019265
Match_columns 343
No_of_seqs 171 out of 1141
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 13:25:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019265.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019265hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uq6_A Adenosine kinase, putat 100.0 1.8E-31 6.1E-36 260.7 17.1 214 120-342 24-243 (372)
2 4e3a_A Sugar kinase protein; s 100.0 3.6E-31 1.2E-35 256.9 19.0 213 120-342 23-238 (352)
3 3otx_A Adenosine kinase, putat 100.0 5.9E-31 2E-35 253.6 18.2 212 120-342 5-225 (347)
4 3vas_A Putative adenosine kina 100.0 8.3E-31 2.8E-35 256.0 16.9 213 116-342 18-241 (370)
5 3loo_A Anopheles gambiae adeno 100.0 1.4E-30 4.6E-35 253.6 16.2 215 114-342 15-239 (365)
6 1bx4_A Protein (adenosine kina 100.0 1.6E-27 5.6E-32 229.0 18.1 208 121-342 5-224 (345)
7 2abs_A Adenosine kinase, AK; r 100.0 7.6E-27 2.6E-31 228.3 22.1 213 115-342 25-244 (383)
8 3go6_A Ribokinase RBSK; phosph 99.9 2.5E-25 8.5E-30 212.1 21.5 184 120-342 17-200 (310)
9 3ljs_A Fructokinase; fructokia 99.9 2.4E-25 8.1E-30 213.6 17.7 189 121-342 3-198 (338)
10 3ikh_A Carbohydrate kinase; tr 99.9 2.1E-25 7E-30 211.0 14.7 182 122-342 2-185 (299)
11 2rbc_A Sugar kinase, AGR_C_456 99.9 9.8E-25 3.3E-29 210.9 19.6 182 121-342 28-211 (343)
12 3ktn_A Carbohydrate kinase, PF 99.9 1.2E-24 4.1E-29 209.2 18.2 188 122-342 2-201 (346)
13 1v1a_A 2-keto-3-deoxygluconate 99.9 4.5E-24 1.5E-28 202.1 21.1 187 123-342 2-194 (309)
14 2hlz_A Ketohexokinase; non-pro 99.9 3.8E-24 1.3E-28 203.5 19.5 188 115-342 10-207 (312)
15 3iq0_A Putative ribokinase II; 99.9 4.9E-24 1.7E-28 204.0 20.2 191 121-342 2-198 (330)
16 3hj6_A Fructokinase, FRK; fruc 99.9 1.1E-24 3.7E-29 208.4 15.4 191 119-342 18-213 (327)
17 2c4e_A Sugar kinase MJ0406; tr 99.9 1.7E-24 5.7E-29 204.6 16.3 182 122-342 5-187 (302)
18 3ry7_A Ribokinase; transferase 99.9 1.3E-24 4.3E-29 204.9 15.0 183 122-342 2-187 (304)
19 3ewm_A Uncharacterized sugar k 99.9 3.3E-24 1.1E-28 203.5 17.4 186 122-342 1-193 (313)
20 4du5_A PFKB; structural genomi 99.9 6.6E-24 2.3E-28 204.0 18.3 189 121-342 25-222 (336)
21 3h49_A Ribokinase; transferase 99.9 3.3E-24 1.1E-28 204.8 15.9 195 120-342 3-199 (325)
22 1rkd_A Ribokinase; carbohydrat 99.9 3.2E-24 1.1E-28 202.9 14.9 182 122-342 4-188 (309)
23 2fv7_A Ribokinase; structural 99.9 4.4E-24 1.5E-28 204.7 16.0 184 121-342 23-209 (331)
24 4e69_A 2-dehydro-3-deoxyglucon 99.9 5.2E-24 1.8E-28 204.3 16.5 185 119-342 20-216 (328)
25 2qcv_A Putative 5-dehydro-2-de 99.9 3.5E-23 1.2E-27 197.6 21.4 191 120-342 9-207 (332)
26 3lhx_A Ketodeoxygluconokinase; 99.9 5.5E-24 1.9E-28 202.5 14.3 180 123-342 5-200 (319)
27 3pl2_A Sugar kinase, ribokinas 99.9 1.1E-23 3.9E-28 199.9 15.9 190 120-342 6-203 (319)
28 2pkf_A Adenosine kinase; trans 99.9 3E-23 1E-27 199.3 18.4 198 118-342 6-206 (334)
29 1tyy_A Putative sugar kinase; 99.9 2.2E-23 7.5E-28 200.8 16.3 180 122-342 24-210 (339)
30 4gm6_A PFKB family carbohydrat 99.9 2.7E-23 9.2E-28 200.1 16.8 189 121-342 23-219 (351)
31 3b1n_A Ribokinase, putative; r 99.9 8.1E-23 2.8E-27 195.8 17.5 191 123-342 1-193 (326)
32 3kzh_A Probable sugar kinase; 99.9 4.6E-23 1.6E-27 197.1 14.9 184 119-342 3-190 (328)
33 1vm7_A Ribokinase; TM0960, str 99.9 1.4E-22 4.7E-27 192.9 16.8 175 123-342 15-191 (311)
34 2nwh_A AGR_C_3442P, carbohydra 99.9 1.1E-22 3.6E-27 193.7 15.2 182 123-342 4-190 (317)
35 2dcn_A Hypothetical fructokina 99.9 2E-22 6.7E-27 190.7 14.0 183 123-342 2-195 (311)
36 2v78_A Fructokinase; transfera 99.9 2.1E-22 7.1E-27 191.0 13.8 183 123-342 2-196 (313)
37 3bf5_A Ribokinase related prot 99.9 2.8E-22 9.4E-27 190.7 14.7 178 117-342 15-193 (306)
38 3ie7_A LIN2199 protein; phosph 99.9 4.6E-21 1.6E-25 182.2 20.3 178 123-342 3-190 (320)
39 2ajr_A Sugar kinase, PFKB fami 99.9 2.5E-21 8.7E-26 185.4 17.9 183 121-342 11-205 (331)
40 2qhp_A Fructokinase; NP_810670 99.9 1.8E-21 6.2E-26 182.6 15.3 174 122-342 3-179 (296)
41 2afb_A 2-keto-3-deoxygluconate 99.9 9.1E-21 3.1E-25 182.6 20.3 188 121-342 11-207 (351)
42 2f02_A Tagatose-6-phosphate ki 99.9 2E-20 6.7E-25 178.5 18.7 178 122-342 2-188 (323)
43 3cqd_A 6-phosphofructokinase i 99.8 3.7E-20 1.3E-24 174.9 19.8 176 124-342 3-188 (309)
44 3umo_A 6-phosphofructokinase i 99.8 4E-20 1.4E-24 174.7 19.0 177 124-342 3-188 (309)
45 2jg1_A Tagatose-6-phosphate ki 99.8 3.6E-20 1.2E-24 177.6 18.6 187 113-342 10-206 (330)
46 4e84_A D-beta-D-heptose 7-phos 99.8 2.7E-20 9.1E-25 180.7 13.0 187 117-342 48-239 (352)
47 2abq_A Fructose 1-phosphate ki 99.8 3.4E-19 1.1E-23 168.3 18.0 174 125-342 3-182 (306)
48 2jg5_A Fructose 1-phosphate ki 99.8 6.8E-19 2.3E-23 165.8 18.4 175 124-342 2-182 (306)
49 3kd6_A Carbohydrate kinase, PF 99.8 1.1E-18 3.8E-23 165.8 14.2 172 122-342 2-176 (313)
50 1vk4_A PFKB carbohydrate kinas 99.7 4.7E-18 1.6E-22 160.4 9.3 150 173-342 30-186 (298)
51 2yxt_A Pyridoxal kinase; beta 98.0 1.2E-06 4.1E-11 82.6 2.0 119 203-342 12-151 (312)
52 2ddm_A Pyridoxine kinase; pyri 97.5 5.9E-05 2E-09 69.8 4.7 118 206-342 26-160 (283)
53 3drw_A ADP-specific phosphofru 96.3 0.051 1.7E-06 54.6 14.0 211 116-341 21-309 (474)
54 1jxh_A Phosphomethylpyrimidine 96.2 0.0027 9.1E-08 59.0 3.7 61 277-342 94-162 (288)
55 1gc5_A ADP-dependent glucokina 94.8 0.087 3E-06 52.8 9.1 151 177-341 117-305 (467)
56 1ua4_A Glucokinase, ADP-depend 93.6 0.13 4.3E-06 51.5 7.2 151 177-341 109-292 (455)
57 1l2l_A ADP-dependent glucokina 92.9 0.21 7E-06 50.0 7.5 149 177-341 112-295 (457)
58 3mbh_A Putative phosphomethylp 92.7 0.18 6.2E-06 46.9 6.5 64 277-342 77-147 (291)
59 3zs7_A Pyridoxal kinase; trans 90.7 0.19 6.5E-06 47.0 4.3 65 276-342 75-150 (300)
60 1ub0_A THID, phosphomethylpyri 89.6 0.62 2.1E-05 41.6 6.6 61 277-342 70-138 (258)
61 1ekq_A Hydroxyethylthiazole ki 89.3 0.44 1.5E-05 43.8 5.4 68 273-342 54-124 (272)
62 2i5b_A Phosphomethylpyrimidine 88.4 0.87 3E-05 41.0 6.7 61 277-342 74-142 (271)
63 3pzs_A PM kinase, pyridoxamine 87.7 0.45 1.5E-05 43.9 4.4 65 276-342 76-149 (289)
64 3h74_A Pyridoxal kinase; PSI-I 86.7 1.3 4.4E-05 40.8 6.9 61 277-342 74-142 (282)
65 3rm5_A Hydroxymethylpyrimidine 75.8 3.3 0.00011 42.0 5.7 63 277-342 91-160 (550)
66 1v8a_A Hydroxyethylthiazole ki 72.5 3.9 0.00013 37.3 4.9 70 272-342 51-121 (265)
67 3dzv_A 4-methyl-5-(beta-hydrox 67.2 12 0.0004 34.6 6.9 82 260-342 40-123 (273)
68 3nl6_A Thiamine biosynthetic b 63.9 17 0.00057 36.9 7.9 80 260-342 287-370 (540)
69 3ost_A Serine/threonine-protei 50.8 4.6 0.00016 33.3 0.9 21 24-44 3-23 (128)
70 2fq6_A Cystathionine beta-lyas 41.6 67 0.0023 30.6 7.8 59 277-342 167-228 (415)
71 3can_A Pyruvate-formate lyase- 40.6 75 0.0026 26.1 7.1 45 294-342 18-62 (182)
72 3ri6_A O-acetylhomoserine sulf 39.0 65 0.0022 31.0 7.3 40 276-317 166-206 (430)
73 3fdb_A Beta C-S lyase, putativ 36.2 2.4E+02 0.0081 25.2 11.3 107 173-318 83-193 (377)
74 3qhx_A Cystathionine gamma-syn 36.0 61 0.0021 30.3 6.4 40 276-317 150-190 (392)
75 3ndn_A O-succinylhomoserine su 35.2 82 0.0028 29.9 7.3 40 276-317 165-205 (414)
76 1uvq_C Orexin; immunology, MHC 34.1 15 0.0005 22.4 1.0 18 68-85 8-25 (33)
77 4fp9_B Mterf domain-containing 33.4 8.9 0.0003 36.5 0.0 15 79-93 286-300 (335)
78 3meb_A Aspartate aminotransfer 32.0 2E+02 0.0069 27.1 9.5 25 294-318 221-245 (448)
79 1tqx_A D-ribulose-5-phosphate 31.4 86 0.0029 27.8 6.2 58 272-339 81-143 (227)
80 1e5e_A MGL, methionine gamma-l 31.0 1.7E+02 0.0057 27.3 8.6 41 276-318 146-188 (404)
81 3tz6_A Aspartate-semialdehyde 30.3 2.1E+02 0.0072 26.9 9.1 90 207-318 4-96 (344)
82 3hpd_A Hydroxyethylthiazole ki 30.3 54 0.0019 30.0 4.8 69 272-341 51-120 (265)
83 2ayu_A Nucleosome assembly pro 30.2 11 0.00037 37.1 0.0 8 59-66 313-320 (417)
84 2rfv_A Methionine gamma-lyase; 28.8 1.9E+02 0.0064 26.6 8.5 41 276-318 148-189 (398)
85 1vrm_A Hypothetical protein TM 28.4 9.6 0.00033 36.0 -0.7 16 22-37 6-21 (325)
86 1y8q_A Ubiquitin-like 1 activa 28.1 3.5E+02 0.012 25.1 10.3 98 174-313 40-155 (346)
87 1y81_A Conserved hypothetical 26.9 2.4E+02 0.0082 22.5 10.5 27 203-229 16-43 (138)
88 3ctl_A D-allulose-6-phosphate 26.4 58 0.002 28.9 4.2 54 277-339 80-133 (231)
89 3nmy_A Xometc, cystathionine g 26.3 1.3E+02 0.0044 28.4 6.9 40 276-317 151-191 (400)
90 3lvm_A Cysteine desulfurase; s 25.3 2E+02 0.007 26.2 8.0 50 266-317 152-202 (423)
91 1gc0_A Methionine gamma-lyase; 24.5 1.7E+02 0.006 26.9 7.4 59 277-342 150-209 (398)
92 3pwk_A Aspartate-semialdehyde 24.1 2.9E+02 0.01 26.1 8.9 90 207-318 5-97 (366)
93 2ctz_A O-acetyl-L-homoserine s 23.6 2.4E+02 0.0081 26.4 8.2 41 276-317 143-183 (421)
94 3h14_A Aminotransferase, class 23.2 4.1E+02 0.014 23.9 11.2 40 277-318 161-204 (391)
95 1t3i_A Probable cysteine desul 23.2 3.2E+02 0.011 24.6 8.9 71 266-342 158-229 (420)
96 3ach_A Beta-1,4-endoglucanase; 22.9 46 0.0016 28.8 2.6 51 23-74 5-55 (203)
97 3pj0_A LMO0305 protein; struct 22.8 2.6E+02 0.0089 24.8 8.1 77 265-342 126-206 (359)
98 3inp_A D-ribulose-phosphate 3- 22.8 60 0.002 29.3 3.5 54 277-340 109-162 (246)
99 3ovp_A Ribulose-phosphate 3-ep 22.3 59 0.002 28.8 3.4 55 276-340 86-140 (228)
100 3op7_A Aminotransferase class 22.3 4.2E+02 0.014 23.6 10.5 112 173-317 83-196 (375)
101 3e5d_A Putative glyoxalase I; 21.5 1.8E+02 0.0062 21.2 5.7 41 216-256 85-125 (127)
102 2p7o_A Glyoxalase family prote 21.4 1.4E+02 0.0049 22.2 5.2 46 216-261 79-124 (133)
103 3c8f_A Pyruvate formate-lyase 20.5 1.7E+02 0.0057 24.6 5.9 60 279-342 71-130 (245)
104 2bp3_S Platelet glycoprotein I 20.5 41 0.0014 19.5 1.2 12 55-66 9-20 (26)
105 4gqr_A Pancreatic alpha-amylas 20.2 67 0.0023 30.5 3.5 25 293-317 75-99 (496)
106 3bc8_A O-phosphoseryl-tRNA(SEC 20.2 1.1E+02 0.0036 30.2 5.0 49 294-342 214-264 (450)
No 1
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.97 E-value=1.8e-31 Score=260.67 Aligned_cols=214 Identities=16% Similarity=0.219 Sum_probs=182.7
Q ss_pred CCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeec-ccCceEEecCChHHHHHHHHHHhCCCCCC
Q 019265 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAM-DGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (343)
Q Consensus 120 ~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i-~~~~~~~~~GGsa~NvA~aLArLG~~~~~ 198 (343)
.....|++||+++||+++.+++.|+++++|++|.+++++..+.. .+..+ .....+..+||+++|+|+++++||.+
T Consensus 24 ~~~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~-~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~--- 99 (372)
T 3uq6_A 24 LSEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMT-IYDEIQKKKKLNYIAGGATLNTVKMIQWIIQK--- 99 (372)
T ss_dssp CCTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTT-HHHHHHTSSSCEEEECCHHHHHHHHHHHHHCS---
T ss_pred CCCCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHH-HHHHHhccCCeEEeCCcHHHHHHHHHHHcCCC---
Confidence 33445999999999999999999999999999999999854432 22222 34467789999999999999999972
Q ss_pred CCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC-CCCceEEEEEECCCCCeEEEEecCCCCCCCCchhh----hh
Q 019265 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL----VN 273 (343)
Q Consensus 199 ~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~-~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~----~~ 273 (343)
...|.|+|+||+|.+|+++++.|++.||+++++... +.+|+.|+++++ +|+|++++++|++..++++++. +.
T Consensus 100 --~~~~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~~ga~~~l~~~~i~~~~~~~ 176 (372)
T 3uq6_A 100 --PFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWS 176 (372)
T ss_dssp --TTSEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHH
T ss_pred --CCcEEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEeccchhhcchhhhhhhhHHH
Confidence 225999999999999999999999999999988754 468999998886 8999999999999999887764 35
Q ss_pred ccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 274 LISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 274 ~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
.+++++|+|++||.+. ...+.+.++++.|+++|++++||++.+++.+.+++.+.++++++||+|+|-
T Consensus 177 ~i~~a~~~~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne 243 (372)
T 3uq6_A 177 LVEKAQVYYIAGFVIN--TCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNE 243 (372)
T ss_dssp HHHHCSEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEH
T ss_pred HhhcccEEEEeccccc--ccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCH
Confidence 6789999999999753 246788999999999999999999988777888999999999999999983
No 2
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.97 E-value=3.6e-31 Score=256.93 Aligned_cols=213 Identities=27% Similarity=0.451 Sum_probs=187.6
Q ss_pred CCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCC
Q 019265 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (343)
Q Consensus 120 ~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~ 199 (343)
|++++|+++|++++|+++.++..|++++++++|.+++++.++...++..+ ......+||+++|+|++|++||.
T Consensus 23 m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~--~~~~~~~GG~~~N~A~~la~LG~----- 95 (352)
T 4e3a_A 23 MTRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRM--GPALEASGGSAGNTAAGVANLGG----- 95 (352)
T ss_dssp CCSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHS--CSCEEEECCHHHHHHHHHHHHTC-----
T ss_pred CCcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHh--hhccEecCCHHHHHHHHHHHcCC-----
Confidence 56799999999999999999999999999999999998765544433333 24568899999999999999999
Q ss_pred CCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC-CCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCCc
Q 019265 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKT 278 (343)
Q Consensus 200 ~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~-~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~a 278 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+. +.+|++|+++++++|+|+++++++++..++++++..+.++++
T Consensus 96 ---~~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~~~~~~~ 172 (352)
T 4e3a_A 96 ---KAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEADVVADA 172 (352)
T ss_dssp ---CEEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHHTE
T ss_pred ---CeEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCHHHHhhC
Confidence 8999999999999999999999999999998764 468999999999999999999999988899988887888999
Q ss_pred eEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcc--cCcEEEeec
Q 019265 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYY--MVLIVVLEF 342 (343)
Q Consensus 279 div~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~--~vDIlf~~~ 342 (343)
+++|++||.+..+...+.+.++++.|+++|++++||++.+.+.+.+++.+.++++ ++||+++|.
T Consensus 173 ~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~ 238 (352)
T 4e3a_A 173 KVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANR 238 (352)
T ss_dssp EEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEH
T ss_pred CEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCH
Confidence 9999999975444457889999999999999999999987666667788999999 999999984
No 3
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.97 E-value=5.9e-31 Score=253.55 Aligned_cols=212 Identities=19% Similarity=0.291 Sum_probs=184.2
Q ss_pred CCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHh----CCC
Q 019265 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL----GGK 195 (343)
Q Consensus 120 ~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArL----G~~ 195 (343)
.++++|+++|++++|+++.++..|+++|+|++|.+.+++..+....-+.+....+...+||+++|+|++|++| |.
T Consensus 5 ~~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~- 83 (347)
T 3otx_A 5 SAPLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKG- 83 (347)
T ss_dssp -CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTT-
T ss_pred cCCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCC-
Confidence 4788999999999999999999999999999999999983322211122345578899999999999999999 88
Q ss_pred CCCCCCCc-eEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhh---
Q 019265 196 PIGGPALN-VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL--- 271 (343)
Q Consensus 196 ~~~~~~~~-v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~--- 271 (343)
+ +.|+|.||+|.+|+.+++.|++.||+++++...+.+|++|+++++ +|+|+++.+++++..++++++.
T Consensus 84 -------~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~-~g~r~~~~~~ga~~~~~~~~~~~~~ 155 (347)
T 3otx_A 84 -------KFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT-GKERTLVADLGAANHLSSEHMRSPA 155 (347)
T ss_dssp -------SSEEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE-TTEEEEEEEEEGGGGCCHHHHTSHH
T ss_pred -------CeEEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE-CCceeeeechhhhhcCCHHHcCchh
Confidence 7 999999999999999999999999999998766678999999998 8999999999998888887764
Q ss_pred -hhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 272 -VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 272 -~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++.+++++|+|++||.+..+ .+.+.++++.|+++|+++++|++.+.+.+.+++.+.++++++||+++|.
T Consensus 156 ~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~ 225 (347)
T 3otx_A 156 VVRAMDESRIFYFSGFTLTVD--VNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANR 225 (347)
T ss_dssp HHHHHHHCSEEEEEGGGGGTC--HHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEH
T ss_pred hHHHHhhCCEEEEeeeecccC--HHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCH
Confidence 35688999999999976544 6889999999999999999999977666667889999999999999984
No 4
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.97 E-value=8.3e-31 Score=255.99 Aligned_cols=213 Identities=16% Similarity=0.192 Sum_probs=185.3
Q ss_pred CCCCCCCccEEEEcCceeeeEEecChhHHHhhccccCcceecc---cccccceeeecccCceEEecCChHHHHHHHHHHh
Q 019265 116 ASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVN---HEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL 192 (343)
Q Consensus 116 ~~~~~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~---~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArL 192 (343)
....+++.+|+++|++++|+++.++..|+++++|++|.+.+++ .|..++. +.+......+||+++|+|++|++|
T Consensus 18 ~~~~m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~---~~~~~~~~~~GG~~~N~A~~la~L 94 (370)
T 3vas_A 18 GSHDLSEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEI---QKKKKLNYIAGGATLNTVKMIQWI 94 (370)
T ss_dssp ---CCCTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHH---TTSSSCEEEEECHHHHHHHHHHHH
T ss_pred CccccCCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHH---hhcCCeEEecCCHHHHHHHHHHHh
Confidence 3455677899999999999999999999999999999999984 4444443 345678899999999999999999
Q ss_pred ---CCCCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCc
Q 019265 193 ---GGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYD 268 (343)
Q Consensus 193 ---G~~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~ 268 (343)
|. ++.|+|.||+|.+|+++++.|++.||++.++.. .+.+|++|+++++ +|+|+++.++|++..++++
T Consensus 95 ~~~G~--------~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~~ga~~~l~~~ 165 (370)
T 3vas_A 95 IQKPF--------VCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLA 165 (370)
T ss_dssp HCCTT--------CEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHH
T ss_pred cCCCC--------cEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEccchhhhCCHH
Confidence 98 899999999999999999999999999999886 5679999999998 8999999999998888887
Q ss_pred hhhh----hccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 269 PCLV----NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 269 di~~----~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++.. +.+++++|||++||.+.. +.+.+.++++.|+++|+++++|++.+.+.+..++.+.++++++||+++|.
T Consensus 166 ~~~~~~~~~~~~~~~~v~~~g~~~~~--~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~ 241 (370)
T 3vas_A 166 HIEQPHVWSLVEKAQVYYIAGFVINT--CYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNE 241 (370)
T ss_dssp HHTSHHHHHHHHHCSEEEEEGGGHHH--HHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEH
T ss_pred HcCchhhHHHHhhCCEEEEEeeeccC--CHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCH
Confidence 7653 567899999999987543 26788999999999999999999876666667788999999999999984
No 5
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=1.4e-30 Score=253.62 Aligned_cols=215 Identities=19% Similarity=0.257 Sum_probs=182.2
Q ss_pred cCCCCCCCCccEEEEcCceeeeEEecChhHHHhhccccCcceeccc---ccccceeeecccCceEEecCChHHHHHHHHH
Q 019265 114 GSASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNH---EERGRVLRAMDGCSYKAAAGGSLSNSLVALA 190 (343)
Q Consensus 114 ~~~~~~~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~---p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLA 190 (343)
.+++..+.+++|+++|++++|+++.++..|++++++++|.+.+.+. |..+++ +........+||+++|+|++++
T Consensus 15 ~~~~~~~~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~---~~~~~~~~~~GG~~~N~a~~~~ 91 (365)
T 3loo_A 15 GSHMESLRDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQEL---IEKYQAEYIAGGSVQNSLRVAQ 91 (365)
T ss_dssp ------CCTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHH---HHHHCCEEEEECHHHHHHHHHH
T ss_pred CCccccCCCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHH---hhcCCeEEecCCHHHHHHHHHH
Confidence 4677778889999999999999999999999999999999998653 222322 2233577899999999999999
Q ss_pred Hh---CCCCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCC
Q 019265 191 RL---GGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINY 267 (343)
Q Consensus 191 rL---G~~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~ 267 (343)
+| |. ++.++|.||+|.+|+.+++.|++.||++.++...+.+|++|+++++ +++|+++.++|++..+++
T Consensus 92 ~L~~lG~--------~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~-~~~r~~~~~~ga~~~~~~ 162 (365)
T 3loo_A 92 WILQRPR--------TAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT-GTQRSLCANLAAANDFTP 162 (365)
T ss_dssp HHHTCTT--------SEEEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE-TTEEEEEEECGGGGGCCG
T ss_pred HhhcCCC--------cEEEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE-CCceEEEeccchHhhCCH
Confidence 87 78 8999999999999999999999999999998876679999999998 889999999999888988
Q ss_pred chhhh----hccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 268 DPCLV----NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 268 ~di~~----~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++.. +.+++++++|++||.+.. +++.+.++++.|+++|+++++|++.+.+.+..++.+.++++++||+++|.
T Consensus 163 ~~~~~~~~~~~~~~~~~v~i~G~~~~~--~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~ 239 (365)
T 3loo_A 163 EHLRSDGNRAYLQGAQFFYVSGFFFTV--SFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNE 239 (365)
T ss_dssp GGGGSHHHHHHHHHCSEEEEEGGGHHH--HHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEH
T ss_pred hHcCchhhHHHHhhCCEEEEeeeeccC--CHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCH
Confidence 87643 567899999999997543 36788999999999999999999877666677889999999999999984
No 6
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.95 E-value=1.6e-27 Score=229.03 Aligned_cols=208 Identities=19% Similarity=0.254 Sum_probs=175.2
Q ss_pred CCccEEEEcCceeeeEEecChhHHHhhccccCcceecc---cccccceeeecccCceEEecCChHHHHHHHHHHhC----
Q 019265 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVN---HEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLG---- 193 (343)
Q Consensus 121 ~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~---~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG---- 193 (343)
++++|+++|++++|+++.++..+++++++++|...+++ .|..+++ +........+||+++|+|++|++||
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~---~~~~~~~~~~GG~~~NvA~~la~lgg~~~ 81 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDEL---VKKFKVEYHAGGSTQNSIKVAQWMIQQPH 81 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHH---HHHSCCEEEEECHHHHHHHHHHHHHCSST
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHH---hccCCceecCCcHHHHHHHHHHHhcCCCC
Confidence 56789999999999999999889999999999877754 2333332 2235678899999999999999997
Q ss_pred CCCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCc-hhh-
Q 019265 194 GKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYD-PCL- 271 (343)
Q Consensus 194 ~~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~-di~- 271 (343)
. ++.|+|.||+|.+|+.+++.|++.||+++++...+.+|++++++++ +|+|+++.+++++..++++ ++.
T Consensus 82 ~--------~~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~~~~~~~~~~ 152 (345)
T 1bx4_A 82 K--------AATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT-GDNRSLIANLAAANCYKKEKHLDL 152 (345)
T ss_dssp T--------CEEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE-TTEEEEEEECGGGGGCCGGGTTTS
T ss_pred C--------cEEEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc-CCceEeeeccchHhhcCcccccCc
Confidence 7 8999999999999999999999999999998766678999999987 7899998888888777776 554
Q ss_pred ---hhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 272 ---VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 272 ---~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
.+.+++++++|++||.+..+ .+.+.++++.++++|+++++|++.+.+.+...+.+.++++++||+++|.
T Consensus 153 ~~~~~~~~~~~~v~~~g~~~~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~ 224 (345)
T 1bx4_A 153 EKNWMLVEKARVCYIAGFFLTVS--PESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNE 224 (345)
T ss_dssp HHHHHHHHHCSEEEEEGGGGGTC--HHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEH
T ss_pred HHHHHHHhhCCEEEEEEEeccCC--HHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCH
Confidence 34567899999999876544 6888999999999999999999865444445677889999999999984
No 7
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.95 E-value=7.6e-27 Score=228.34 Aligned_cols=213 Identities=20% Similarity=0.280 Sum_probs=174.9
Q ss_pred CCCCCCCCccEEEEcCceeeeEEecChhHHHhhccccCcceeccc---ccccceeeecccCceEEecCChHHHHHHHHHH
Q 019265 115 SASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNH---EERGRVLRAMDGCSYKAAAGGSLSNSLVALAR 191 (343)
Q Consensus 115 ~~~~~~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~---p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLAr 191 (343)
|+...+++++|+|+|++++|+++.++..+++++++++|...+++. |..+++ ........+||+++|+|++|++
T Consensus 25 ~~~~~~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~----~~~~~~~~~GG~~~NvA~~la~ 100 (383)
T 2abs_A 25 SSNSATGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL----DQFNPTSLPGGSALNSVRVVQK 100 (383)
T ss_dssp -----CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTG----GGGCCEEEEESHHHHHHHHHHH
T ss_pred cccCCCCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhh----ccccceeeCCChHHHHHHHHHH
Confidence 445556678999999999999999987788888889988765431 212211 2346778999999999999999
Q ss_pred h---CCCCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCc
Q 019265 192 L---GGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYD 268 (343)
Q Consensus 192 L---G~~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~ 268 (343)
| |. ++.|+|.||+|.+|+.+++.|++.||++.++...+.+|++++++++ +|+|+++.+++++..++++
T Consensus 101 Lg~~g~--------~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~l~~~ 171 (383)
T 2abs_A 101 LLRKPG--------SAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN-EKERTLCTHLGACGSFRLP 171 (383)
T ss_dssp HHCSTT--------SEEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCC
T ss_pred hccCCC--------cEEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc-CCceeEeeccChhhhCChh
Confidence 9 67 8999999999999999999999999999998765678999999997 7899999899888778776
Q ss_pred hhhhhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHh-CCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 269 PCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHR-SGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 269 di~~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~-~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+...+.++++++||++||.+..+ .+.+.++++.+++ .|+++++|+....+.+...+.+.++++++||+++|.
T Consensus 172 ~~~~~~l~~~~~v~~~g~~~~~~--~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~ 244 (383)
T 2abs_A 172 EDWTTFASGALIFYATAYTLTAT--PKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNE 244 (383)
T ss_dssp TTHHHHTTTCCEEEEEGGGGTTC--HHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEH
T ss_pred hhhHHHhhcCCEEEEeeecccCC--HHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCH
Confidence 55566788999999999876544 6888999999999 999999999875554556677889999999999984
No 8
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.94 E-value=2.5e-25 Score=212.09 Aligned_cols=184 Identities=24% Similarity=0.339 Sum_probs=155.3
Q ss_pred CCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCC
Q 019265 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (343)
Q Consensus 120 ~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~ 199 (343)
+++++|+++|++++|+++.++. .|.+++. +....+...+||+++|+|++|++||.
T Consensus 17 ~mm~~i~viG~~~iD~~~~v~~-----------------~p~~g~~---~~~~~~~~~~GG~~~NvA~~la~LG~----- 71 (310)
T 3go6_A 17 PMAPRVCVVGSVNMDLTFVVDA-----------------LPRPGET---VLAASLTRTPGGKGANQAVAAARAGA----- 71 (310)
T ss_dssp --CCEEEEECCCEEEEEEECSS-----------------CCCTTCC---CCCSEEEEEEECHHHHHHHHHHHTTC-----
T ss_pred cccCCEEEECCceEEEEEecCC-----------------CCCCCCe---EEecceeecCCCHHHHHHHHHHHCCC-----
Confidence 4567899999999999999865 1233322 22356789999999999999999999
Q ss_pred CCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCCce
Q 019265 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTN 279 (343)
Q Consensus 200 ~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~ad 279 (343)
++.++|.+|+|.+|+.+++.|++.||+++++...+.+|++++++++++|+|+++.+++++..++ ++ .+.+++++
T Consensus 72 ---~~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-~~~l~~~~ 145 (310)
T 3go6_A 72 ---QVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-PSAVANCD 145 (310)
T ss_dssp ---EEEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-TTTTTTCS
T ss_pred ---CeEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-HHHhhcCC
Confidence 8999999999999999999999999999999766679999999999899999999998877666 44 56788999
Q ss_pred EEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 280 iv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++|+++. .+ .+.+.++++.+++.|++++||+++... .++.++++++++||+++|.
T Consensus 146 ~v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~D~~~~~~---~~~~~~~ll~~~dil~~N~ 200 (310)
T 3go6_A 146 VLLTQLE---IP--VATALAAARAAQSADAVVMVNASPAGQ---DRSSLQDLAAIADVVIANE 200 (310)
T ss_dssp EEEECSS---SC--HHHHHHHHHHHHHTTCEEEEECCSSSC---CHHHHHHHHHHCSEEEEEH
T ss_pred EEEECCC---CC--HHHHHHHHHHHHHcCCEEEEcCCcccc---chHHHHHHHhhCCEEEeCH
Confidence 9999863 23 688899999999999999999986432 4677889999999999984
No 9
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.93 E-value=2.4e-25 Score=213.63 Aligned_cols=189 Identities=21% Similarity=0.232 Sum_probs=158.2
Q ss_pred CCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCC
Q 019265 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (343)
Q Consensus 121 ~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~ 200 (343)
++++|+++|++++|++...+. + |.. ...+...+||+++|+|++|++||.
T Consensus 3 ~~~~v~viG~~~iD~~~~~~~-~----------------~~~--------~~~~~~~~GG~~~NvA~~la~LG~------ 51 (338)
T 3ljs_A 3 LKKTILCFGEALIDMLAQPLV-K----------------KGM--------PRAFLQCAGGAPANVAVAVARLGG------ 51 (338)
T ss_dssp -CCEEEEESCCEEEEEECCCS-S----------------TTS--------CCCEEEEEECHHHHHHHHHHHHTC------
T ss_pred CCCCEEEEChhhhheeccCCC-C----------------ccc--------hhceeecCCChHHHHHHHHHhCCC------
Confidence 567899999999999987754 1 110 235778999999999999999999
Q ss_pred CCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEec--CCCCCCCCchhhhhccCC
Q 019265 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQ--GTSSTINYDPCLVNLISK 277 (343)
Q Consensus 201 ~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~--Ga~~~l~~~di~~~~i~~ 277 (343)
++.++|.||+|.+|+++++.|++.||+++++.+ .+.+|++++++++++|+|++.++. +++..++++++....+++
T Consensus 52 --~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~ 129 (338)
T 3ljs_A 52 --AVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSD 129 (338)
T ss_dssp --CEEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHT
T ss_pred --CEEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcC
Confidence 899999999999999999999999999999886 567899999999988999988876 666678888877667889
Q ss_pred ceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcc--h--hhhcHHHHHHhcccCcEEEeec
Q 019265 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--C--IERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 278 adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~--~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++++|++++.+..+...+.+.++++.++++|++++|||+.+. | .+...+.+.++++++||+++|.
T Consensus 130 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~ 198 (338)
T 3ljs_A 130 ALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSS 198 (338)
T ss_dssp EEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEH
T ss_pred CCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecH
Confidence 999999998654333467899999999999999999998642 1 1235678889999999999984
No 10
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.93 E-value=2.1e-25 Score=211.04 Aligned_cols=182 Identities=19% Similarity=0.306 Sum_probs=154.1
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
.++|+++|++++|+++.++. .|.+++. +........+||+++|+|++|++||.
T Consensus 2 ~~~i~viG~~~iD~~~~~~~-----------------~p~~g~~---~~~~~~~~~~GG~~~NvA~~la~lG~------- 54 (299)
T 3ikh_A 2 SLRVYVTGNITVDETWSIPD-----------------IPKKGAS---IHGVKVSQDIGGKGANQAIILSRCGI------- 54 (299)
T ss_dssp CCCEEEECCCEEEEEEECSS-----------------CCCTTCE---EECEEEEEEEECHHHHHHHHHHHTTC-------
T ss_pred CceEEEECceEEEEEEecCC-----------------CCCCCCe---EEeeeeeeccCCHHHHHHHHHHHCCC-------
Confidence 47899999999999999875 2333332 22346788999999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhh--hhccCCce
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL--VNLISKTN 279 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~--~~~i~~ad 279 (343)
++.++|.+|+|.+|+.+++.|++.||++++++..+.+|++++++++++|+|+++.+++++..++++++. .+.+++++
T Consensus 55 -~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 133 (299)
T 3ikh_A 55 -ETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVAGD 133 (299)
T ss_dssp -CEEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCCTTC
T ss_pred -CeEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhccCC
Confidence 899999999999999999999999999999876667899999999989999999999887778877664 35678999
Q ss_pred EEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 280 iv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++|+++.. + .+.+.++++.+++.|++++||+++.. +.+.++++++||+++|.
T Consensus 134 ~v~~~g~~---~--~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~ 185 (299)
T 3ikh_A 134 ILLQQGNF---S--LDKTRALFQYARSRGMTTVFNPSPVN------PDFCHLWPLIDIAVVNE 185 (299)
T ss_dssp EEEECSCS---C--HHHHHHHHHHHHHTTCEEEECCCSCC------GGGGGCGGGCSEEEEEH
T ss_pred EEEECCCC---C--HHHHHHHHHHHHHcCCEEEEccccch------hhHHHHHhhCCEEEecH
Confidence 99998742 3 67889999999999999999998642 24567899999999984
No 11
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=9.8e-25 Score=210.93 Aligned_cols=182 Identities=15% Similarity=0.131 Sum_probs=152.8
Q ss_pred CCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCC
Q 019265 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (343)
Q Consensus 121 ~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~ 200 (343)
++++|+++|++++|+++.++. + |..++. +....+...+||+++|+|++|++||.
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~-~----------------p~~~~~---~~~~~~~~~~GG~~~NvA~~la~LG~------ 81 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVAD-M----------------PKGEGK---VLPYEVLQIAEGMASSAAYAVHRMGG------ 81 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSS-C----------------CCSSSC---CCCSEEEEEEECHHHHHHHHHHHTTC------
T ss_pred cCCeEEEECcceEEEEeecCC-C----------------CCCCCe---EeeeeeEEcCCcHHHHHHHHHHHcCC------
Confidence 446799999999999998864 1 222221 22346778999999999999999999
Q ss_pred CCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCCce
Q 019265 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTN 279 (343)
Q Consensus 201 ~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~ad 279 (343)
++.++|.||+|.+|+.+++.|++.||++.++.+ .+.+|++++++++++|+|+++.+++++..++++++....+++++
T Consensus 82 --~~~~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~~~l~~~~ 159 (343)
T 2rbc_A 82 --RASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFD 159 (343)
T ss_dssp --EEEEECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCCHHHHTTCS
T ss_pred --ceEEEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhcHhhhCCCC
Confidence 899999999999999999999999999999876 45689999999998999999889988767777776666778999
Q ss_pred EEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHH-hcccCcEEEeec
Q 019265 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWY-EYYMVLIVVLEF 342 (343)
Q Consensus 280 iv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~e-lL~~vDIlf~~~ 342 (343)
+||++++. ++.+.++++.+++.|++++|||... .+.+.+ +++++||+++|.
T Consensus 160 ~v~~~~~~------~~~~~~~~~~a~~~g~~v~~Dp~~~------~~~~~~~ll~~~dil~~N~ 211 (343)
T 2rbc_A 160 AVLVDVRW------PELALDVLTVARALGKPAILDGDVA------PVETLEGLAPAATHIVFSE 211 (343)
T ss_dssp EEEECSSS------HHHHHHHHHHHHHTTCCEEEEECSC------CHHHHHHHGGGCSEEEEEH
T ss_pred EEEEcCCC------HHHHHHHHHHHHHCCCEEEEECCcc------ccccHHHHHhcCCEEEeCH
Confidence 99999763 4678889999999999999999752 345677 899999999984
No 12
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.92 E-value=1.2e-24 Score=209.17 Aligned_cols=188 Identities=13% Similarity=0.037 Sum_probs=151.7
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
+++|+++|++++|++.... ++ .+....+...+||+++|+|++|++||.
T Consensus 2 ~~~v~viG~~~~D~~~~~~----------------------~~---~~~~~~~~~~~GG~~~NvA~~la~LG~------- 49 (346)
T 3ktn_A 2 SLKIAAFGEVMLRFTPPEY----------------------LM---LEQTEQLRMNFVGTGVNLLANLAHFQL------- 49 (346)
T ss_dssp CCEEEEECCCEEEEECSTT----------------------CC---TTTCSCCEEEEECHHHHHHHHHHHTTC-------
T ss_pred CCcEEEeChhhhhhcCCCC----------------------Cc---ccccceeEEeccCHHHHHHHHHHHcCC-------
Confidence 4689999999999885211 11 112356788999999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEe-c---CCCCCCCCchhh-hhccC
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAY-Q---GTSSTINYDPCL-VNLIS 276 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~-~---Ga~~~l~~~di~-~~~i~ 276 (343)
++.++|.||+|.+|+.+++.|++.||+++++...+.+|+++++.++++++++++.| . ++...++++++. ...++
T Consensus 50 -~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 128 (346)
T 3ktn_A 50 -ETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLA 128 (346)
T ss_dssp -EEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHT
T ss_pred -CeEEEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhC
Confidence 89999999999999999999999999999988766789999988775566688887 2 455677777765 45788
Q ss_pred CceEEEEcCcCCC-CCchHHHHHHHHHHHHhCCCEEEEECCCcc--hh----hhcHHHHHHhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFE-LPDTIRTITKACEVAHRSGALVAVTASDVT--CI----ERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~-~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~~----~~~~e~l~elL~~vDIlf~~~ 342 (343)
++++||++||.+. .+...+.+.++++.|+++|++++|||+.+. +. +...+.+.++++++||+++|.
T Consensus 129 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~ 201 (346)
T 3ktn_A 129 EVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSR 201 (346)
T ss_dssp TCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCH
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccH
Confidence 9999999998642 222347889999999999999999998542 21 334578899999999999984
No 13
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.92 E-value=4.5e-24 Score=202.06 Aligned_cols=187 Identities=22% Similarity=0.226 Sum_probs=151.6
Q ss_pred ccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCC
Q 019265 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (343)
Q Consensus 123 ~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~ 202 (343)
++|+++|++++|++..... + .+....+...+||+++|+|++|++||.
T Consensus 2 ~~i~viG~~~~D~~~~~~~----------------------~---~~~~~~~~~~~GG~~~NvA~~la~LG~-------- 48 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEPG----------------------H---LRGKRLLEVYVGGAEVNVAVALARLGV-------- 48 (309)
T ss_dssp CSEEEESCCEEEEECSSSS----------------------C---GGGCCEEEEEEECHHHHHHHHHHHHTC--------
T ss_pred CcEEEEccceEEEecCCCC----------------------c---ccchheeeeecCcHHHHHHHHHHHcCC--------
Confidence 5799999999999853211 0 012345778999999999999999999
Q ss_pred ceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEec--CCCCCCCCchhhhhccCCceE
Q 019265 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ--GTSSTINYDPCLVNLISKTNI 280 (343)
Q Consensus 203 ~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~--Ga~~~l~~~di~~~~i~~adi 280 (343)
++.++|.+|+|.+|+.+++.|++.||+++++.+.+.+|++++++++++|+|++++++ ++...++++++....++++++
T Consensus 49 ~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 128 (309)
T 1v1a_A 49 KVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRF 128 (309)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSE
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCE
Confidence 899999999999999999999999999999885433999999999888999988775 456677777776677889999
Q ss_pred EEEcCcCCCC-CchHHHHHHHHHHHHhCCCEEEEECCCcc--hh-hhcHHHHHHhcccCcEEEeec
Q 019265 281 FIVEGYLFEL-PDTIRTITKACEVAHRSGALVAVTASDVT--CI-ERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 281 v~isG~~l~~-p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~~-~~~~e~l~elL~~vDIlf~~~ 342 (343)
||++||.+.. +...+.+.++++.++++|++++||++... +. +...+.+.++++++||+++|.
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~ 194 (309)
T 1v1a_A 129 LHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSE 194 (309)
T ss_dssp EEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEH
T ss_pred EEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcH
Confidence 9999986521 22357788999999999999999998642 21 223467788999999999984
No 14
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.92 E-value=3.8e-24 Score=203.49 Aligned_cols=188 Identities=19% Similarity=0.253 Sum_probs=148.0
Q ss_pred CCCCCCCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCC
Q 019265 115 SASVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGG 194 (343)
Q Consensus 115 ~~~~~~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~ 194 (343)
|.--.+++++|+++|++++|+++.++. + |..++. +........+||+++|+|++|++||.
T Consensus 10 ~~~~~~~~~~i~viG~~~iD~~~~~~~-~----------------p~~~~~---~~~~~~~~~~GG~~~NvA~~la~LG~ 69 (312)
T 2hlz_A 10 SSGLVPRGSQILCVGLVVLDVISLVDK-Y----------------PKEDSE---IRCLSQRWQRGGNASNSCTILSLLGA 69 (312)
T ss_dssp -------CCEEEEESCCEEEEEEEESS-C----------------CCTTCE---EECSEEEEEEESHHHHHHHHHHHHTC
T ss_pred ccCCCCCCCcEEEECcceEEEeecccc-C----------------CCccce---eecccceeccCccHHHHHHHHHHcCC
Confidence 344456677899999999999998865 2 222222 12345678899999999999999999
Q ss_pred CCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC-CCCceEEEEEEC-CCCCeEEEEecCCCCCCCCchhhh
Q 019265 195 KPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTT-PDAQRAMLAYQGTSSTINYDPCLV 272 (343)
Q Consensus 195 ~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~-~~~Tg~~iVlid-~dGeRt~i~~~Ga~~~l~~~di~~ 272 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+. +.+|++++++++ ++|+|+++.++++...++++++..
T Consensus 70 --------~v~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~ 141 (312)
T 2hlz_A 70 --------PCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK 141 (312)
T ss_dssp --------CEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT
T ss_pred --------ceEEEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH
Confidence 8999999999999999999999999999988765 567888887775 479999999998888888877765
Q ss_pred hccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhC--------CCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 273 NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRS--------GALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 273 ~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~--------G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
..++++++||++++. .+.+.++++.+++. ++++++|+... ++.+.++++++||+++|.
T Consensus 142 ~~l~~~~~v~~~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~------~~~~~~~l~~~dil~~n~ 207 (312)
T 2hlz_A 142 VDLTQFKWIHIEGRN------ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP------REELFQLFGYGDVVFVSK 207 (312)
T ss_dssp SCGGGEEEEEEECSS------HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC------CGGGGGGGGSSSEEEECH
T ss_pred hhhccCCEEEEeccC------HHHHHHHHHHHHHhcccccCCCCeEEEEEcccc------hHHHHHHHhcCCEEEEcH
Confidence 567899999999863 45667778888776 78999998653 234678899999999984
No 15
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.92 E-value=4.9e-24 Score=204.05 Aligned_cols=191 Identities=14% Similarity=0.148 Sum_probs=149.8
Q ss_pred CCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCC
Q 019265 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (343)
Q Consensus 121 ~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~ 200 (343)
++++|+++|++++|++..... .+.. ........++||+++|+|++|++||.
T Consensus 2 ~m~~i~viG~~~~D~~~~~~~--------------------~~~~---~~~~~~~~~~GG~~~NvA~~la~LG~------ 52 (330)
T 3iq0_A 2 SLSKVFTIGEILVEIMASKIG--------------------QPFD---QPGIWNGPYPSGAPAIFIDQVTRLGV------ 52 (330)
T ss_dssp --CEEEEESCCEEEEEEEEET--------------------CCSS---SCEEEEEEEEECHHHHHHHHHHHTTC------
T ss_pred CCCCEEEEcceeEEEeccCCC--------------------CCcc---ccccccCcCCCCHHHHHHHHHHHCCC------
Confidence 456899999999999986321 0000 01112457899999999999999999
Q ss_pred CCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEec--CCCCCCCCchhhhhccCC
Q 019265 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQ--GTSSTINYDPCLVNLISK 277 (343)
Q Consensus 201 ~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~--Ga~~~l~~~di~~~~i~~ 277 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+ .+.+|++++++++++|+|++.++. ++...++++++....+++
T Consensus 53 --~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 130 (330)
T 3iq0_A 53 --PCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKD 130 (330)
T ss_dssp --CEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTT
T ss_pred --cEEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhcc
Confidence 899999999999999999999999999999875 457999999999989999665553 355667887777778899
Q ss_pred ceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcc--hh-hhcHHHHHHhcccCcEEEeec
Q 019265 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--CI-ERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 278 adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~~-~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++||++||.+..+...+.+.++++.++++|++++|||+... |. +...+.+.++++++||+++|.
T Consensus 131 ~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~ 198 (330)
T 3iq0_A 131 CTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSE 198 (330)
T ss_dssp EEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBG
T ss_pred CCEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCH
Confidence 999999999753333457789999999999999999998753 21 234567888999999999985
No 16
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.92 E-value=1.1e-24 Score=208.38 Aligned_cols=191 Identities=20% Similarity=0.259 Sum_probs=154.2
Q ss_pred CCCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCC
Q 019265 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (343)
Q Consensus 119 ~~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~ 198 (343)
.+++++|+++|++++|++...+. + |.. ....+...+||+++|+|++|++||.
T Consensus 18 ~~~~~~v~viG~~~~D~~~~~~~-~----------------p~~-------~~~~~~~~~GG~~~NvA~~la~LG~---- 69 (327)
T 3hj6_A 18 SKGDLDVVSLGEILVDMISTEEV-N----------------SLS-------QSREYTRHFGGSPANIAVNLSRLGK---- 69 (327)
T ss_dssp ----CCEEEESCCEEEEECCCCC-S----------------SGG-------GCCEEEEEEECHHHHHHHHHHHTTC----
T ss_pred ccCCCCEEEEccceEEEeccCCC-C----------------Ccc-------ccceeeeecCcHHHHHHHHHHHcCC----
Confidence 34568899999999999987653 1 111 1346778999999999999999999
Q ss_pred CCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCC
Q 019265 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISK 277 (343)
Q Consensus 199 ~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~ 277 (343)
++.++|.+|+|.+|+.+++.|++.||+++++.+ .+.+|+++++..+ +|+|+++.+++++..++++++..+.+++
T Consensus 70 ----~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~~a~~~~~~~~~~~~~~~~ 144 (327)
T 3hj6_A 70 ----KVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYREADMYLQEDDIIFELIKR 144 (327)
T ss_dssp ----CEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEECSGGGGCCSCCCHHHHHC-
T ss_pred ----cEEEEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEecChhhhCChhhcCHhHhcc
Confidence 899999999999999999999999999999884 5578998887766 6999999999988888888877778899
Q ss_pred ceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchh----hhcHHHHHHhcccCcEEEeec
Q 019265 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCI----ERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 278 adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~----~~~~e~l~elL~~vDIlf~~~ 342 (343)
++++|++||.+..+...+.+.++++.|+++|++++||++..... +...+.+.++++++||+++|.
T Consensus 145 ~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~ 213 (327)
T 3hj6_A 145 SKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSL 213 (327)
T ss_dssp -CEEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBH
T ss_pred CCEEEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCH
Confidence 99999999864322246788999999999999999999864311 224677889999999999984
No 17
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.92 E-value=1.7e-24 Score=204.63 Aligned_cols=182 Identities=15% Similarity=0.106 Sum_probs=149.2
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
+++|+++|++++|+++.+++ + |.+++. +........+||+++|+|++|++||.
T Consensus 5 m~~i~viG~~~iD~~~~~~~-~----------------p~~~~~---~~~~~~~~~~GG~~~N~A~~la~LG~------- 57 (302)
T 2c4e_A 5 MEKITCVGHTALDYIFNVEK-F----------------PEPNTS---IQIPSARKYYGGAAANTAVGIKKLGV------- 57 (302)
T ss_dssp EEEEEEESCCEEEEEEECSS-C----------------CCTTCC---CCCSCEEEEEECHHHHHHHHHHHTTC-------
T ss_pred cCcEEEECceeEEEEecccc-c----------------CCCCce---eeecceeecCCCHHHHHHHHHHHCCC-------
Confidence 34799999999999998765 1 222221 22346788999999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCCceE
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNI 280 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~adi 280 (343)
++.++|.+|+|.+|+.+++.|++.||+++++.. .+.+|++++++++++|+|+++++++++..++++++.. +++++
T Consensus 58 -~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~ 133 (302)
T 2c4e_A 58 -NSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN---FNTEI 133 (302)
T ss_dssp -EEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC---CCEEE
T ss_pred -ceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc---ccCCE
Confidence 899999999999999999999999999998875 4568999999998889999999998776676666543 68999
Q ss_pred EEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 281 v~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+|+++. . ++.+.++++.++++| +++||++.... ....+.+.++++++||+++|.
T Consensus 134 v~~~~~---~---~~~~~~~~~~a~~~g-~v~~D~~~~~~-~~~~~~~~~~l~~~dil~~N~ 187 (302)
T 2c4e_A 134 VHIATG---D---PEFNLKCAKKAYGNN-LVSFDPGQDLP-QYSKEMLLEIIEHTNFLFMNK 187 (302)
T ss_dssp EEECSS---C---HHHHHHHHHHHBTTB-EEEECCGGGGG-GCCHHHHHHHHHTCSEEEEEH
T ss_pred EEEeCC---C---cHHHHHHHHHHHhcC-CEEEeCchhhh-hhhHHHHHHHHhcCCEEEcCH
Confidence 999863 2 478889999999999 99999985321 112567788999999999984
No 18
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.92 E-value=1.3e-24 Score=204.94 Aligned_cols=183 Identities=20% Similarity=0.250 Sum_probs=152.6
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
+++|+++|++++|+++.++. .|.+++.. +........+||+++|+|++|++||.
T Consensus 2 m~~v~viG~~~~D~~~~~~~-----------------~p~~g~~~--~~~~~~~~~~GG~~~NvA~~la~lG~------- 55 (304)
T 3ry7_A 2 TNKVVILGSTNVDQFLTVER-----------------YAQPGETL--HVEEAQKAFGGGKGANQAIATARMQA------- 55 (304)
T ss_dssp CCEEEEECCCEEEEEEECSS-----------------CCCTTCCC--CCSSCCEEEEECHHHHHHHHHHHTTC-------
T ss_pred CCcEEEEccceeEEEEeccC-----------------CCCCCCce--ecccceeecCCCHHHHHHHHHHHCCC-------
Confidence 46799999999999999875 22333221 02356788999999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhh--hccCCc
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--NLISKT 278 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~--~~i~~a 278 (343)
++.++|.+|+|.+|+.+++.|++.||+++++.+ .+.+|++++++++++|+|+++.+++++..++++++.. +.++++
T Consensus 56 -~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~ 134 (304)
T 3ry7_A 56 -DTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINA 134 (304)
T ss_dssp -EEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHTC
T ss_pred -CeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhccC
Confidence 899999999999999999999999999999875 5679999999999889999999999888888776643 457899
Q ss_pred eEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 279 div~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++|+++. .+ .+.+.++++.++++|++++||+++.. +.+.++++++||+++|.
T Consensus 135 ~~v~~~~~---~~--~~~~~~~~~~a~~~~~~v~~D~~~~~------~~~~~ll~~~dil~~N~ 187 (304)
T 3ry7_A 135 DFVVAQLE---VP--IPAIISAFEIAKAHGVTTVLNPAPAK------ALPNELLSLIDIIVPNE 187 (304)
T ss_dssp SEEEEETT---SC--HHHHHHHHHHHHHTTCEEEEECCSCC------CCCHHHHTTCSEECCBH
T ss_pred CEEEEcCC---CC--HHHHHHHHHHHHHcCCEEEEeCCccc------cccHHHHHhCCEEecCH
Confidence 99999853 22 78889999999999999999998631 23456788999999984
No 19
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.92 E-value=3.3e-24 Score=203.54 Aligned_cols=186 Identities=18% Similarity=0.225 Sum_probs=151.5
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
+++|+++|++++|++..... + .+....+...+||+++|+|++|++||.
T Consensus 1 M~~v~viG~~~iD~~~~~~g----------------------~---~~~~~~~~~~~GG~~~NvA~~la~LG~------- 48 (313)
T 3ewm_A 1 MSLIASIGELLIDLISVEEG----------------------D---LKDVRLFEKHPGGAPANVAVGVSRLGV------- 48 (313)
T ss_dssp -CEEEEESCCEEEEEESSSS----------------------C---TTTCCEEEEEEECHHHHHHHHHHHTTC-------
T ss_pred CCcEEEECceeeeeecCCCC----------------------C---cccccceeecCCCHHHHHHHHHHHCCC-------
Confidence 35799999999999975421 0 012346778999999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCC-CCCCCCchhhhhccCCce
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGT-SSTINYDPCLVNLISKTN 279 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga-~~~l~~~di~~~~i~~ad 279 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+ .+.+|+++++++++ |+|+++.+++. ...++++++..+.+++++
T Consensus 49 -~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~~~a~~~l~~~~~~~~~l~~~~ 126 (313)
T 3ewm_A 49 -KSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYDDVAYFNMTLNDINWDIVEEAK 126 (313)
T ss_dssp -EEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECCSSGGGCCCGGGCCHHHHHHCS
T ss_pred -CeEEEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeeccCHHHhCChhhCCHHHhCCCC
Confidence 899999999999999999999999999999874 56789999988874 99999999874 467888877777788899
Q ss_pred EEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcc--hh---hhcHHHHHHhcccCcEEEeec
Q 019265 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--CI---ERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 280 iv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~~---~~~~e~l~elL~~vDIlf~~~ 342 (343)
++|++|+.+..+...+.+.++++.++ .+++++|||+... +. +...+.+.++++++|++++|.
T Consensus 127 ~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~ 193 (313)
T 3ewm_A 127 IVNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASE 193 (313)
T ss_dssp EEEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEH
T ss_pred EEEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCH
Confidence 99999986533334678899999998 4799999998642 11 223467888999999999984
No 20
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.91 E-value=6.6e-24 Score=204.01 Aligned_cols=189 Identities=15% Similarity=0.139 Sum_probs=152.0
Q ss_pred CCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCC
Q 019265 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (343)
Q Consensus 121 ~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~ 200 (343)
++++|+++|++++|++..... . .+....+...+||+++|+|++|++||.
T Consensus 25 ~~~~vlviG~~~iD~~~~~~g-----------~--------------~~~~~~~~~~~GG~~~NvA~~la~LG~------ 73 (336)
T 4du5_A 25 SALDVITFGEAMMLLVADRPG-----------P--------------LEHAEAFHKRTAGAETNVAIGLARLGL------ 73 (336)
T ss_dssp -CEEEEEECCCEEEEEESSSS-----------C--------------GGGCCEEEEEEECHHHHHHHHHHHTTC------
T ss_pred CCCCEEEEChhhhhccCCCCC-----------c--------------cchhhheeecCCCHHHHHHHHHHhCCC------
Confidence 457899999999999975421 1 122356788999999999999999999
Q ss_pred CCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC-CCCceEEEEEECCCCCeEEE-Ee--cCCCCCCCCchhhhhccC
Q 019265 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAML-AY--QGTSSTINYDPCLVNLIS 276 (343)
Q Consensus 201 ~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~-~~~Tg~~iVlid~dGeRt~i-~~--~Ga~~~l~~~di~~~~i~ 276 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+. +.+|++++++++++|+++++ ++ .++...++++++....++
T Consensus 74 --~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~ 151 (336)
T 4du5_A 74 --KVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLL 151 (336)
T ss_dssp --CEEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHT
T ss_pred --cEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhc
Confidence 8999999999999999999999999999998864 56899999998888956544 44 367777888888777889
Q ss_pred CceEEEEcCcCCC-CCchHHHHHHHHHHHHhCCCEEEEECCCcc--h--hhhcHHHHHHhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFE-LPDTIRTITKACEVAHRSGALVAVTASDVT--C--IERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~-~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~--~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++++|++|+... .+...+.+.++++.+++.|++++|||+.+. | .+...+.+.++++++||+++|.
T Consensus 152 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~ 222 (336)
T 4du5_A 152 SARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGM 222 (336)
T ss_dssp TEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBH
T ss_pred cCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCH
Confidence 9999999998642 233467888999999999999999998532 1 1223567888999999999984
No 21
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.91 E-value=3.3e-24 Score=204.79 Aligned_cols=195 Identities=18% Similarity=0.199 Sum_probs=149.8
Q ss_pred CCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCC
Q 019265 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (343)
Q Consensus 120 ~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~ 199 (343)
+++++|+|+|++++|++.......+ ...+ ......+...+||+++|+|++|++||.
T Consensus 3 m~~~~v~~iG~~~~D~~~~~~~~~~------------~~~~-------~~p~~~~~~~~GG~~~NvA~~la~LG~----- 58 (325)
T 3h49_A 3 LDNLDVICIGAAIVDIPLQPVSKNI------------FDVD-------SYPLERIAMTTGGDAINEATIISRLGH----- 58 (325)
T ss_dssp --CEEEEEESCCEEEEEECSCCGGG------------GGSS-------CCCCSCCCCEEESHHHHHHHHHHHTTC-----
T ss_pred CCCCeEEEEChhhheeeccCCCCcc------------cccc-------ccchheeEEccCcHHHHHHHHHHHCCC-----
Confidence 5678999999999999876432111 0000 011134668899999999999999999
Q ss_pred CCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCC-CCCCCchhhhhccCC
Q 019265 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTS-STINYDPCLVNLISK 277 (343)
Q Consensus 200 ~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~-~~l~~~di~~~~i~~ 277 (343)
++.++|.||+|.+|+++++.|++.||+++++.+ .+.+|++++++++++|+|+++++++.+ ..++++++..+.+.+
T Consensus 59 ---~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (325)
T 3h49_A 59 ---RTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQ 135 (325)
T ss_dssp ---EEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCGGGGGG
T ss_pred ---CeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcChhhhcc
Confidence 899999999999999999999999999999875 457899999999999999999887543 456777776677889
Q ss_pred ceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 278 adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++++|++|+........+.+.++++.|+++++ +++|++.........+.+.++++++||+++|.
T Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~-~~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~ 199 (325)
T 3h49_A 136 AKLLSLASIFNSPLLDGKALTEIFTQAKARQM-IICADMIKPRLNETLDDICEALSYVDYLFPNF 199 (325)
T ss_dssp CSEEEEEEETTSTTSCHHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHHHHTTCSEEECBH
T ss_pred CCEEEEecccCCcccCHHHHHHHHHHHHhcCC-EEEecCCchhhhhHHHHHHHHHhhCCEEecCH
Confidence 99999999753221235788999999999984 56664432222234567888999999999984
No 22
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.91 E-value=3.2e-24 Score=202.87 Aligned_cols=182 Identities=20% Similarity=0.298 Sum_probs=150.0
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
+++|+++|++++|+++.++. + |..++. +....+...+||+++|+|++|++||.
T Consensus 4 ~~~v~viG~~~iD~~~~~~~-~----------------p~~g~~---~~~~~~~~~~GG~~~N~A~~la~lG~------- 56 (309)
T 1rkd_A 4 AGSLVVLGSINADHILNLQS-F----------------PTPGET---VTGNHYQVAFGGKGANQAVAAGRSGA------- 56 (309)
T ss_dssp CCEEEEECCCEEEEEEECSS-C----------------CCTTCC---CCCCCEEEEEECHHHHHHHHHHHHTC-------
T ss_pred CCeEEEECcceEeEEEecCC-C----------------CCCCCe---eecCceeecCCCHHHHHHHHHHhCCC-------
Confidence 45799999999999998865 1 223322 22346788999999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhh--hccCCc
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--NLISKT 278 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~--~~i~~a 278 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+ .+.+|++++++++++|+|+++.+++++..++++++.. +.++++
T Consensus 57 -~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 135 (309)
T 1rkd_A 57 -NIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANA 135 (309)
T ss_dssp -EEEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHC
T ss_pred -ceEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcccC
Confidence 899999999999999999999999999999885 4568999999999889999999998877787776643 356789
Q ss_pred eEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 279 div~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++|+++. .| .+.+..+++.++++|++++||++... . ...++++++||+++|.
T Consensus 136 ~~v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~D~~~~~---~---~~~~ll~~~dil~~N~ 188 (309)
T 1rkd_A 136 SALLMQLE---SP--LESVMAAAKIAHQNKTIVALNPAPAR---E---LPDELLALVDIITPNE 188 (309)
T ss_dssp SEEEECSS---SC--HHHHHHHHHHHHHTTCEEEECCCSCC---C---CCHHHHTTCSEECCCH
T ss_pred CEEEEeCC---CC--HHHHHHHHHHHHHcCCEEEEECCccc---c---chHHHHhhCCEEEcCH
Confidence 99999853 23 57888999999999999999998741 1 1245788999999884
No 23
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.91 E-value=4.4e-24 Score=204.66 Aligned_cols=184 Identities=22% Similarity=0.297 Sum_probs=150.0
Q ss_pred CCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCC
Q 019265 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (343)
Q Consensus 121 ~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~ 200 (343)
++++|+++|++++|+++.++. + |.+++. +....+...+||+++|+|++|++||.
T Consensus 23 ~~~~vlviG~~~iD~~~~~~~-~----------------p~~g~~---~~~~~~~~~~GG~~~NvA~~la~LG~------ 76 (331)
T 2fv7_A 23 EVAAVVVVGSCMTDLVSLTSR-L----------------PKTGET---IHGHKFFIGFGGKGANQCVQAARLGA------ 76 (331)
T ss_dssp -CCSEEEECCCEEEEEEECSS-C----------------CCTTCC---CCCSEEEEEEECHHHHHHHHHHHTTC------
T ss_pred ccCCEEEECcccEEEEEecCC-C----------------CCCCce---EecCceEECcCCHHHHHHHHHHHCCC------
Confidence 346899999999999998865 1 222322 22346778999999999999999999
Q ss_pred CCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhh--hccCC
Q 019265 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--NLISK 277 (343)
Q Consensus 201 ~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~--~~i~~ 277 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+ .+.+|++++++++++|+|+++.+++++..++++++.. +.+++
T Consensus 77 --~~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~~ 154 (331)
T 2fv7_A 77 --MTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISR 154 (331)
T ss_dssp --CEEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHHH
T ss_pred --CeEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhcc
Confidence 899999999999999999999999999999886 4678999999999889999999998877787776543 34678
Q ss_pred ceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 278 adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++++|+++. .+ .+.+..+++.+++.|++++|||+... + ....++++++||+++|.
T Consensus 155 ~~~v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~Dp~~~~--~---~~~~~ll~~~dil~~N~ 209 (331)
T 2fv7_A 155 AKVMVCQLE---IT--PATSLEALTMARRSGVKTLFNPAPAI--A---DLDPQFYTLSDVFCCNE 209 (331)
T ss_dssp CSEEEECSS---SC--HHHHHHHHHHHHHTTCEEEECCCSCC--T---TCCTHHHHTCSEEEEEH
T ss_pred CCEEEEecC---CC--HHHHHHHHHHHHHcCCEEEEeCCccc--c---cchHHHHhcCCEEEeCH
Confidence 999999753 23 57888999999999999999998642 1 11235788999999984
No 24
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.91 E-value=5.2e-24 Score=204.28 Aligned_cols=185 Identities=16% Similarity=0.214 Sum_probs=150.4
Q ss_pred CCCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHh--CCCC
Q 019265 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARL--GGKP 196 (343)
Q Consensus 119 ~~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArL--G~~~ 196 (343)
+.++++|+++|++++|++....+ ..+...+||+++|+|++|++| |.
T Consensus 20 ~~~m~~i~viG~~~iD~~~~~~~------------------------------~~~~~~~GG~~~NvA~~la~Lg~G~-- 67 (328)
T 4e69_A 20 FQSMMHILSIGECMAELAPADLP------------------------------GTYRLGFAGDTFNTAWYLARLRPES-- 67 (328)
T ss_dssp CBSSCEEEEESCCEEEEEECSST------------------------------TEEEEEEECHHHHHHHHHHHHCTTS--
T ss_pred cccCCcEEEecCcEEEEecCCCC------------------------------CceEEecCCHHHHHHHHHHhcCCCC--
Confidence 34557899999999999975210 245688999999999999999 88
Q ss_pred CCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC-CCCceEEEEEECCCCCeEEEEecCCCC---CCCCchhhh
Q 019265 197 IGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSS---TINYDPCLV 272 (343)
Q Consensus 197 ~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~-~~~Tg~~iVlid~dGeRt~i~~~Ga~~---~l~~~di~~ 272 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+. +.+|++++++++ +|+|+++++++.+. .++..++..
T Consensus 68 ------~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~ 140 (328)
T 4e69_A 68 ------RISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALA 140 (328)
T ss_dssp ------EEEEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHH
T ss_pred ------cEEEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccch
Confidence 8999999999999999999999999999998765 468999999999 99999999987643 344445555
Q ss_pred hccCCceEEEEcCcCCC--CCchHHHHHHHHHHHHhCCCEEEEECCCcc--h--hhhcHHHHHHhcccCcEEEeec
Q 019265 273 NLISKTNIFIVEGYLFE--LPDTIRTITKACEVAHRSGALVAVTASDVT--C--IERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 273 ~~i~~adiv~isG~~l~--~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~--~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+.++++++||++||.+. .+...+.+.++++.+++.|++++|||+... | .+...+.+.++++++||+++|.
T Consensus 141 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~ 216 (328)
T 4e69_A 141 AAMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSF 216 (328)
T ss_dssp HHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBH
T ss_pred HHhcCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCH
Confidence 77899999999998531 122467888999999999999999997532 1 1234567889999999999984
No 25
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.91 E-value=3.5e-23 Score=197.60 Aligned_cols=191 Identities=16% Similarity=0.241 Sum_probs=152.1
Q ss_pred CCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCC
Q 019265 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (343)
Q Consensus 120 ~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~ 199 (343)
+++++|+++|++++|++..... .|. .....+...+||+++|+|++|++||.
T Consensus 9 ~~~~~i~viG~~~~D~~~~~~~-----------------~~~-------~~~~~~~~~~GG~~~NvA~~la~LG~----- 59 (332)
T 2qcv_A 9 DREFDLIAIGRACIDLNAVEYN-----------------RPM-------EETMTFSKYVGGSPANIVIGSSKLGL----- 59 (332)
T ss_dssp CCSEEEEEESCCEEEEEESSCS-----------------SCG-------GGCCCEEEEEESHHHHHHHHHHHTTC-----
T ss_pred ccCCcEEEECcceEEEecCCCC-----------------CCc-------cccceeEecCCCHHHHHHHHHHHcCC-----
Confidence 3567899999999999986532 010 01235778999999999999999999
Q ss_pred CCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC--CCCceEEEEEECCCCCeEEEEecC--CCCCCCCchhhhhcc
Q 019265 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK--DGTTGTVIVLTTPDAQRAMLAYQG--TSSTINYDPCLVNLI 275 (343)
Q Consensus 200 ~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~--~~~Tg~~iVlid~dGeRt~i~~~G--a~~~l~~~di~~~~i 275 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+. +.+|+++++.++.+|+++++.++. ++..++++++....+
T Consensus 60 ---~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~ 136 (332)
T 2qcv_A 60 ---KAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYI 136 (332)
T ss_dssp ---CEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHH
T ss_pred ---ceEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHH
Confidence 8999999999999999999999999999998754 358999998877678888877763 455677777766677
Q ss_pred CCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchh----hhcHHHHHHhcccCcEEEeec
Q 019265 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCI----ERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~----~~~~e~l~elL~~vDIlf~~~ 342 (343)
++++++|++|+.+..+...+.+.++++.+++.|++++|||+..... +...+.+.++++++||+++|.
T Consensus 137 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~ 207 (332)
T 2qcv_A 137 RRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTR 207 (332)
T ss_dssp TTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEH
T ss_pred ccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccH
Confidence 8999999999865333235788899999999999999999864211 123456778899999999984
No 26
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.91 E-value=5.5e-24 Score=202.54 Aligned_cols=180 Identities=14% Similarity=0.151 Sum_probs=142.9
Q ss_pred ccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhC----CCCCC
Q 019265 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLG----GKPIG 198 (343)
Q Consensus 123 ~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG----~~~~~ 198 (343)
++|+|+|++++|++... ..+...+||+++|+|++|++|| .
T Consensus 5 ~~i~viG~~~~D~~~~~--------------------------------~~~~~~~GG~~~NvA~~la~LG~~~~~---- 48 (319)
T 3lhx_A 5 KKIAVIGECMIELSEKG--------------------------------ADVKRGFGGDTLNTSVYIARQVDPAAL---- 48 (319)
T ss_dssp EEEEEESCCEEEEEC-----------------------------------CCEEEEECHHHHHHHHHHTTSCTTTE----
T ss_pred CceeeechhhhhhccCC--------------------------------CceEEecCChHHHHHHHHHHcCCCCCC----
Confidence 57999999999997532 1346789999999999999999 7
Q ss_pred CCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC-CCCceEEEEEECCCCCeEEEEecCCC---CCCCCchh--hh
Q 019265 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTS---STINYDPC--LV 272 (343)
Q Consensus 199 ~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~-~~~Tg~~iVlid~dGeRt~i~~~Ga~---~~l~~~di--~~ 272 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+. +.+|++++++++++|+|+++++++.. ..+++.++ ..
T Consensus 49 ----~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 124 (319)
T 3lhx_A 49 ----TVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAIC 124 (319)
T ss_dssp ----EEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHH
T ss_pred ----cEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHH
Confidence 8999999999999999999999999999998865 46899999999889999999998743 34555543 23
Q ss_pred hccCCceEEEEcCcCCC--CCchHHHHHHHHHHHHhCCCEEEEECCCcc--hh--hhcHHHHHHhcccCcEEEeec
Q 019265 273 NLISKTNIFIVEGYLFE--LPDTIRTITKACEVAHRSGALVAVTASDVT--CI--ERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 273 ~~i~~adiv~isG~~l~--~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~~--~~~~e~l~elL~~vDIlf~~~ 342 (343)
+.++++++||++||.+. .+...+.+.++++.++++|++++|||+... +. +...+.+.++++++||+++|.
T Consensus 125 ~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~ 200 (319)
T 3lhx_A 125 EELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTL 200 (319)
T ss_dssp HHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEH
T ss_pred HHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCH
Confidence 56889999999998532 122357889999999999999999998642 11 224567788999999999985
No 27
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.91 E-value=1.1e-23 Score=199.93 Aligned_cols=190 Identities=19% Similarity=0.147 Sum_probs=151.0
Q ss_pred CCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCC
Q 019265 120 PERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGG 199 (343)
Q Consensus 120 ~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~ 199 (343)
+++++|+++|++++|++...+. .|.. ....+...+||+++|+|++|++||.
T Consensus 6 ~~~~~v~~iG~~~~D~~~~~~~-----------------~p~~-------~~~~~~~~~GG~~~NvA~~la~LG~----- 56 (319)
T 3pl2_A 6 TSTHEVLAIGRLGVDIYPLQSG-----------------VGLA-------DVQSFGKYLGGSAANVSVAAARHGH----- 56 (319)
T ss_dssp -CCCSEEEESCCEEEECBSSSS-----------------CCGG-------GCCCBCCEEECHHHHHHHHHHHTTC-----
T ss_pred ccCCCEEEEChhheeeecccCC-----------------CCcc-------ccceeeecCCCcHHHHHHHHHHCCC-----
Confidence 3568999999999999876543 0110 1235678899999999999999999
Q ss_pred CCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecC--C-CCCCCCchhhhhcc
Q 019265 200 PALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQG--T-SSTINYDPCLVNLI 275 (343)
Q Consensus 200 ~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~G--a-~~~l~~~di~~~~i 275 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+ .+.+|+++++.++++|+|+++++++ + +..++++++..+.+
T Consensus 57 ---~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~ 133 (319)
T 3pl2_A 57 ---NSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDV 133 (319)
T ss_dssp ---CEEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHH
T ss_pred ---ceEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHh
Confidence 899999999999999999999999999999874 5678999999888889999888854 4 45677777777778
Q ss_pred CCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcc--h--hhhcHHHHHHhcccCcEEEeec
Q 019265 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--C--IERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~--~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++++++|++|+.+..+...+.+..+++.+++ +.+++||++.+. | .+...+.+.++++++||+++|.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~ 203 (319)
T 3pl2_A 134 READILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNK 203 (319)
T ss_dssp HHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECH
T ss_pred ccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCH
Confidence 8999999999875433345566777777766 677899998642 1 1223677889999999999984
No 28
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.90 E-value=3e-23 Score=199.31 Aligned_cols=198 Identities=18% Similarity=0.125 Sum_probs=154.2
Q ss_pred CCCCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCC
Q 019265 118 VLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPI 197 (343)
Q Consensus 118 ~~~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~ 197 (343)
.+.++|+|+++|++++|+++.++..|+..+ ..+. .|..++. +....+...+||+++|+|++|++||.
T Consensus 6 ~~~~~m~i~v~G~~~~D~~~~~~~~~~~~~--~~~~-----~~~~~~~---~~~~~~~~~~GG~~~NvA~~la~LG~--- 72 (334)
T 2pkf_A 6 YFQSHMTIAVTGSIATDHLMRFPGRFSEQL--LPEH-----LHKVSLS---FLVDDLVMHRGGVAGNMAFAIGVLGG--- 72 (334)
T ss_dssp SSCCSSEEEEESCCEEEEEEECSSCTHHHH--TTSC-----GGGCCCC---CCCSEEEEEEECHHHHHHHHHHHTTC---
T ss_pred cCccCCeEEEECChhheEEEecChHHhhhh--chhh-----ccccccc---cccccceecCCChHHHHHHHHHHcCC---
Confidence 455667899999999999998743233221 1111 1222221 22346778999999999999999999
Q ss_pred CCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC-CCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhh--c
Q 019265 198 GGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVN--L 274 (343)
Q Consensus 198 ~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~-~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~--~ 274 (343)
++.++|.||+| +|+ +++.|++.||+++++.+. +.+|++++++++++|+|++.+++|++..++++++... .
T Consensus 73 -----~~~~i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~ 145 (334)
T 2pkf_A 73 -----EVALVGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSA 145 (334)
T ss_dssp -----EEEEECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHH
T ss_pred -----CeEEEEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhh
Confidence 89999999999 999 999999999999998864 5689999999998899998888887766666665432 3
Q ss_pred cCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 275 i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++++++|++++. ++.+.++++.+++.|++++|||+..... ...+.+.++++++||+++|.
T Consensus 146 l~~~~~v~~~~~~------~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~l~~~l~~~dil~~N~ 206 (334)
T 2pkf_A 146 IGKPELVIIGAND------PEAMFLHTEECRKLGLAFAADPSQQLAR-LSGEEIRRLVNGAAYLFTND 206 (334)
T ss_dssp HCSCSEEEEESCC------HHHHHHHHHHHHHHTCCEEEECGGGGGT-SCHHHHHTTTTTCSEEEEEH
T ss_pred hcCCCEEEEcCCC------hHHHHHHHHHHHhcCCeEEEeccchhhh-hhHHHHHHHHhcCCEEecCH
Confidence 5899999999753 5778889999999999999999864211 12467789999999999984
No 29
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.90 E-value=2.2e-23 Score=200.80 Aligned_cols=180 Identities=19% Similarity=0.206 Sum_probs=140.0
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
+.+|+++|++++|++.... ..+...+||+++|+|++|++||.
T Consensus 24 m~~ilviG~~~~D~~~~~~-------------------------------~~~~~~~GG~~~NvA~~la~LG~------- 65 (339)
T 1tyy_A 24 MNKVWVIGDASVDLVPEKQ-------------------------------NSYLKCPGGASANVGVCVARLGG------- 65 (339)
T ss_dssp -CCEEEESCCEEEEEECSS-------------------------------SEEEEEEECHHHHHHHHHHHTTC-------
T ss_pred cCCEEEECcceeEEeccCC-------------------------------CceEEcCCCHHHHHHHHHHHcCC-------
Confidence 3479999999999987521 23457899999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEec--CCCCCCCCchhhhhccCCc
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQ--GTSSTINYDPCLVNLISKT 278 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~--Ga~~~l~~~di~~~~i~~a 278 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+ .+.+|++++++++++|+|+++++. +++..++++ ..+.++++
T Consensus 66 -~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~ 142 (339)
T 1tyy_A 66 -ECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQY 142 (339)
T ss_dssp -CEEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTT
T ss_pred -CeEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccC
Confidence 899999999999999999999999999999886 456899999988888999988765 555556544 33567899
Q ss_pred eEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcc--hh--hhcHHHHHHhcccCcEEEeec
Q 019265 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT--CI--ERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 279 div~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~~--~~~~e~l~elL~~vDIlf~~~ 342 (343)
++||++++.+..+...+.+.++++.+++.|++++|||+... +. +...+.+.++++++||+++|.
T Consensus 143 ~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~ 210 (339)
T 1tyy_A 143 EWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSA 210 (339)
T ss_dssp CEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEH
T ss_pred CEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCH
Confidence 99999987542222357888999999999999999998642 11 234567788999999999984
No 30
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.90 E-value=2.7e-23 Score=200.07 Aligned_cols=189 Identities=16% Similarity=0.148 Sum_probs=142.4
Q ss_pred CCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCC
Q 019265 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (343)
Q Consensus 121 ~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~ 200 (343)
++.+|+++|++|+|+...... .+ .....+...+||+++|+|++|+|||.
T Consensus 23 mm~kv~~~GE~m~~l~p~~~~-------------~~------------~~~~~~~~~~GG~~aNvA~~larLG~------ 71 (351)
T 4gm6_A 23 MMKQVVTIGELLMRLSTQQGI-------------PF------------SQTTALDIHIGGAEANVAVNLSKLGH------ 71 (351)
T ss_dssp --CEEEEECCCEEEEECCTTC-------------CG------------GGCSEEEEEEECHHHHHHHHHHHTTC------
T ss_pred ccCCEEEEcceeEEecCCCCC-------------Cc------------cccCeEEEecCChHHHHHHHHHHcCC------
Confidence 345899999999998753211 00 12356889999999999999999999
Q ss_pred CCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEE-ECCCCCeEEEEecCCC--CCCCCchh-hhhccC
Q 019265 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVL-TTPDAQRAMLAYQGTS--STINYDPC-LVNLIS 276 (343)
Q Consensus 201 ~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVl-id~dGeRt~i~~~Ga~--~~l~~~di-~~~~i~ 276 (343)
++.|+|+||+|.+|+++++.|++.||+++++...+.+|+.+++. .+..+++.++.++... ..+.+.++ ..+.++
T Consensus 72 --~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~ 149 (351)
T 4gm6_A 72 --PTRIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLK 149 (351)
T ss_dssp --CEEEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHT
T ss_pred --CeEEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHh
Confidence 89999999999999999999999999999998765544444444 4445566666655432 22333333 345788
Q ss_pred CceEEEEcCcCCCC-CchHHHHHHHHHHHHhCCCEEEEECCCcc--h-hhhcHHHHHHhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFEL-PDTIRTITKACEVAHRSGALVAVTASDVT--C-IERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~-p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~-~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++++|++|+.+.. +...+.+.++++.|+++|++|+|||+.+. | .+..++.+.++++++||+++|.
T Consensus 150 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~ 219 (351)
T 4gm6_A 150 GIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQ 219 (351)
T ss_dssp TEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCH
T ss_pred hcccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCH
Confidence 99999999976422 33467889999999999999999998642 2 2345678899999999999984
No 31
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.90 E-value=8.1e-23 Score=195.82 Aligned_cols=191 Identities=14% Similarity=0.096 Sum_probs=148.8
Q ss_pred ccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCC
Q 019265 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (343)
Q Consensus 123 ~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~ 202 (343)
|+|+++|++++|+++.++..|+.+ +..+ ..|..++. +....+...+||+++|+|++|++||.
T Consensus 1 m~i~v~G~~~iD~~~~~~~~~~~~--~~~~-----~~p~~~~~---~~~~~~~~~~GG~~~NvA~~la~LG~-------- 62 (326)
T 3b1n_A 1 MATLICGSIAYDNIMTFEGRFREH--ILPD-----QVHLINLS---FLVPTMRREFGGCAGNIAYALNLLGG-------- 62 (326)
T ss_dssp -CEEEESCCEEEEEEECSSCGGGG--CCTT-----SSSSCEEE---EECCSCCCEEECHHHHHHHHHHHTTC--------
T ss_pred CcEEEECcceEEEEEecchhhhhh--cccc-----ccCCCCcc---eecccceeccCCHHHHHHHHHHHcCC--------
Confidence 379999999999999984433322 1111 12333322 22345677899999999999999999
Q ss_pred ceEEEEEcCC-ChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCCceE
Q 019265 203 NVAMTGSVGS-DPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNI 280 (343)
Q Consensus 203 ~v~lig~VG~-D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~adi 280 (343)
++.++|.||+ | +|+ +++.|++.||+++++.+ .+.+|++++++++++|+|++..+++++..+.++++... +++++
T Consensus 63 ~~~~i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~~--~~~~~ 138 (326)
T 3b1n_A 63 DARMMGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGEA--KDIKL 138 (326)
T ss_dssp CEEEEEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGGC--CSCSE
T ss_pred CeeEEEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhcccc--cCCCE
Confidence 8999999999 9 899 99999999999999875 45789999999998899988888887666666555432 78999
Q ss_pred EEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 281 v~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+|++++. ++.+.++++.+++.|++++||++..... ...+.+.++++++||+++|.
T Consensus 139 v~~~~~~------~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~ 193 (326)
T 3b1n_A 139 AIVGPDG------FQGMVQHTEELAQAGVPFIFDPGQGLPL-FDGATLRRSIELATYIAVND 193 (326)
T ss_dssp EEECSCC------HHHHHHHHHHHHHHTCCEEECCGGGGGG-CCHHHHHHHHHHCSEEEEEH
T ss_pred EEECCcc------HHHHHHHHHHHHHCCCEEEEeCchhhhh-ccHHHHHHHHHhCCEEecCH
Confidence 9998642 5778899999999999999999864211 12466788999999999984
No 32
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.89 E-value=4.6e-23 Score=197.10 Aligned_cols=184 Identities=13% Similarity=0.085 Sum_probs=147.2
Q ss_pred CCCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCC
Q 019265 119 LPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIG 198 (343)
Q Consensus 119 ~~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~ 198 (343)
..++++|+|+|++++|+++.++. .|.+++.. .. .....+||+++|+|++|++||.
T Consensus 3 ~~~~~~v~viG~~~vD~~~~~~~-----------------~~~~g~~~---~~-~~~~~~GG~~~NvA~~la~LG~---- 57 (328)
T 3kzh_A 3 LRKEPYLLVFGASVVDVFGFSKA-----------------SYRPYNST---PG-HVKISFGGVCRNIAENMARVGV---- 57 (328)
T ss_dssp -CCCCCEEEECCCEEEEEEEESS-----------------CCCTTSEE---EE-EEEEEEECHHHHHHHHHHHTTC----
T ss_pred CCCCCcEEEECcEEeeeeeccCC-----------------CCCCCCCc---eE-EEEEccCcHHHHHHHHHHHcCC----
Confidence 46778999999999999999865 12223221 12 5678999999999999999999
Q ss_pred CCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEE-ecCCCCCCCCchhh--hhc
Q 019265 199 GPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLA-YQGTSSTINYDPCL--VNL 274 (343)
Q Consensus 199 ~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~-~~Ga~~~l~~~di~--~~~ 274 (343)
++.++|.||+|.+|+.+++.|++.||+++++.. .+.+|+.++++++++|+|++.. .+++...++++.+. .+.
T Consensus 58 ----~v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (328)
T 3kzh_A 58 ----NTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREI 133 (328)
T ss_dssp ----CEEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHH
T ss_pred ----CcEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHh
Confidence 899999999999999999999999999998875 4568999999999999998854 56666666665543 356
Q ss_pred cCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 275 ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 275 i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+..++++++++.. ++.+..+++ +++.|++|+||+++.. ..+.+.++++++||+++|.
T Consensus 134 ~~~~~~~~~~~~~------~~~~~~l~~-a~~~~~~v~~D~~~~~----~~~~~~~~l~~~dil~~N~ 190 (328)
T 3kzh_A 134 FENAEYTVLDSDN------PEIMEYLLK-NFKDKTNFILDPVSAE----KASWVKHLIKDFHTIKPNR 190 (328)
T ss_dssp HHTCSEEEEESSC------HHHHHHHHH-HHTTTSEEEEECCSHH----HHHTSTTTGGGCSEECCBH
T ss_pred hccCCEEEEeCCc------HHHHHHHHH-HhhcCCcEEEEeCCHH----HHHHHHHHhcCCcEEeCCH
Confidence 7899999998742 356667777 8899999999998642 2344677899999999984
No 33
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.89 E-value=1.4e-22 Score=192.85 Aligned_cols=175 Identities=15% Similarity=0.232 Sum_probs=141.9
Q ss_pred ccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCC
Q 019265 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (343)
Q Consensus 123 ~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~ 202 (343)
.+|+|+|++++|+++.++. .|.+++. +....+...+||+++|+|++|++||.
T Consensus 15 ~~v~vvG~~~iD~~~~~~~-----------------~p~~g~~---~~~~~~~~~~GG~~~NvA~~la~LG~-------- 66 (311)
T 1vm7_A 15 LVISVVGSSNIDIVLKVDH-----------------FTKPGET---QKAIEMNVFPGGKGANQAVTVAKIGE-------- 66 (311)
T ss_dssp CCEEEECCCEEEEEEECSS-----------------CCCTTCE---EECSEEEEEEECHHHHHHHHHHHHHS--------
T ss_pred CCEEEECcceeeEEEeccc-----------------CCCCCce---EecCeeeecCCCHHHHHHHHHHHcCC--------
Confidence 5799999999999999875 2333332 22356788999999999999999999
Q ss_pred c-eEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCCceE
Q 019265 203 N-VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNI 280 (343)
Q Consensus 203 ~-v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~adi 280 (343)
+ +.++|.+|+|.+|+.+++.|++.|| ++.+ .+.+|++++++++++|+|+++.+++++..++++++..+.++++++
T Consensus 67 ~~~~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~~~~~ 143 (311)
T 1vm7_A 67 KGCRFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSESDI 143 (311)
T ss_dssp SCEEEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHTTCSE
T ss_pred CceEEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhChhhcccCCE
Confidence 8 9999999999999999999999999 5654 567899999999988999999999888778887766566789999
Q ss_pred EEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 281 FIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 281 v~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+|+++. .| .+.+.. .|++.|++++|||+... +.+.++++++||+++|.
T Consensus 144 v~~~~~---~~--~~~~~~---~a~~~~~~v~~Dp~~~~------~~~~~ll~~~dil~~N~ 191 (311)
T 1vm7_A 144 LLLQNE---IP--FETTLE---CAKRFNGIVIFDPAPAQ------GINEEIFQYLDYLTPNE 191 (311)
T ss_dssp EEECSS---SC--HHHHHH---HHHHCCSEEEECCCSCT------TCCGGGGGGCSEECCBH
T ss_pred EEEeCC---CC--HHHHHH---HHHHcCCEEEEeCcchh------hhhHHHHhhCCEEeCCH
Confidence 999853 23 344433 37889999999998631 12346889999999884
No 34
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.1e-22 Score=193.73 Aligned_cols=182 Identities=20% Similarity=0.172 Sum_probs=145.2
Q ss_pred ccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCC
Q 019265 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (343)
Q Consensus 123 ~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~ 202 (343)
.+|+++|++++|+++.++. .+.+++. .. ..+...+||+++|+|++|++||.
T Consensus 4 ~~i~viG~~~~D~~~~~~~-----------------~~~~~~~---~~-~~~~~~~GG~~~NvA~~la~LG~-------- 54 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGMIET-----------------ETAPGAS---NP-GSWMEEAGGGGFNAARNLSRLGF-------- 54 (317)
T ss_dssp CEEEEESCCEEEEEEEESS-----------------SCCTTSC---CC-EEEEEEEECHHHHHHHHHHHTTC--------
T ss_pred CeEEEECchheEEeeccCC-----------------CCCCCCC---ce-EeEEEeCCcHHHHHHHHHHhcCC--------
Confidence 4799999999999998764 1122221 11 13678999999999999999999
Q ss_pred ceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEec-CCCCCCCCchhh--h--hccCC
Q 019265 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQ-GTSSTINYDPCL--V--NLISK 277 (343)
Q Consensus 203 ~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~-Ga~~~l~~~di~--~--~~i~~ 277 (343)
++.++|.+|+|.+|+.+++.|++.||+++++...+.+|++++++++++|+|+++.+. +++..++++++. . +.+..
T Consensus 55 ~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (317)
T 2nwh_A 55 EVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIA 134 (317)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHH
T ss_pred CcEEEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhcc
Confidence 899999999999999999999999999999555667899999999989999987766 444556665442 2 45778
Q ss_pred ceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 278 TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 278 adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++++|+++. .+ .+.+..+++.+++.|++++|||+.... .+.+.++++++||+++|.
T Consensus 135 ~~~v~~~~~---~~--~~~~~~~~~~a~~~g~~v~~Dp~~~~~----~~~~~~ll~~~dil~~N~ 190 (317)
T 2nwh_A 135 SDFLLCDAN---LP--EDTLTALGLIARACEKPLAAIAISPAK----AVKLKAALGDIDILFMNE 190 (317)
T ss_dssp CSEEEEETT---SC--HHHHHHHHHHHHHTTCCEEEECCSHHH----HGGGTTTGGGCSEEEEEH
T ss_pred CCEEEEeCC---CC--HHHHHHHHHHHHhcCCeEEEeCCCHHH----HHHHHHHhhhCeEecCCH
Confidence 999999853 23 678899999999999999999985321 234567899999999984
No 35
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.88 E-value=2e-22 Score=190.72 Aligned_cols=183 Identities=15% Similarity=0.204 Sum_probs=144.6
Q ss_pred ccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCC
Q 019265 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (343)
Q Consensus 123 ~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~ 202 (343)
++|+++|++++|++..... . .+....+...+||++.|+|++|++||.
T Consensus 2 ~~v~viG~~~~D~~~~~~~-----------~--------------~~~~~~~~~~~GG~~~NvA~~la~LG~-------- 48 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPG-----------P--------------LRHVSYFEKHVAGSEANYCVAFIKQGN-------- 48 (311)
T ss_dssp CEEEEESCCEEEEEESSSS-----------C--------------GGGCCEEEEEEECHHHHHHHHHHHTTC--------
T ss_pred CCEEEECCceEEEecCCCC-----------c--------------ccccceeeecCCChHHHHHHHHHHCCC--------
Confidence 4799999999999973211 0 012346778999999999999999999
Q ss_pred ceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCC--eEEEEec--CCCCCCCCchhhhhccCC
Q 019265 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQ--RAMLAYQ--GTSSTINYDPCLVNLISK 277 (343)
Q Consensus 203 ~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGe--Rt~i~~~--Ga~~~l~~~di~~~~i~~ 277 (343)
++.++|.+|+|.+|+.+++.|++.||+++++.+ .+.+|++++++++++|+ |++++++ +++..++++++....+++
T Consensus 49 ~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 128 (311)
T 2dcn_A 49 ECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKS 128 (311)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTT
T ss_pred ceEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcC
Confidence 899999999999999999999999999999886 45689999999988898 9988775 566778887776677889
Q ss_pred ceEEEEcCcCCC-CCchHHHHHHHHHHHHhCCCEEEEECCCcc--hh-hhcHHHHHHhcc--cCcEEEeec
Q 019265 278 TNIFIVEGYLFE-LPDTIRTITKACEVAHRSGALVAVTASDVT--CI-ERHYDDFWYEYY--MVLIVVLEF 342 (343)
Q Consensus 278 adiv~isG~~l~-~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~~-~~~~e~l~elL~--~vDIlf~~~ 342 (343)
++++|++||.+. .+...+.+.++++.|++. +||++... +. +...+.+.++++ ++||+++|.
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~ 195 (311)
T 2dcn_A 129 ADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDT 195 (311)
T ss_dssp CSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEH
T ss_pred CCEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCH
Confidence 999999998532 122346677777777654 89998631 21 223467788999 999999984
No 36
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.88 E-value=2.1e-22 Score=190.97 Aligned_cols=183 Identities=15% Similarity=0.199 Sum_probs=143.5
Q ss_pred ccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCC
Q 019265 123 WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (343)
Q Consensus 123 ~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~ 202 (343)
++|+++|++++|++.... + + .+....+...+||+++|+|++|++||.
T Consensus 2 ~~v~viG~~~~D~~~~~~-----------~-----------~---~~~~~~~~~~~GG~~~N~A~~la~LG~-------- 48 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNP-----------G-----------P---LRFVNYFEKHVAGSELNFCIAVVRNHL-------- 48 (313)
T ss_dssp CCEEEECCCEEEEEESSS-----------S-----------C---GGGCCEEEEEEECHHHHHHHHHHHTTC--------
T ss_pred CeEEEECcceEEEecCCC-----------C-----------c---ccccceeEecCCChHHHHHHHHHHCCC--------
Confidence 579999999999996321 1 0 012346778999999999999999999
Q ss_pred ceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEE--ECCCCCeEEEEec--CCCCCCCCchhhhhccCC
Q 019265 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVL--TTPDAQRAMLAYQ--GTSSTINYDPCLVNLISK 277 (343)
Q Consensus 203 ~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVl--id~dGeRt~i~~~--Ga~~~l~~~di~~~~i~~ 277 (343)
++.++|.||+|.+|+.+++.|++.||+++++.+ .+.+|++++++ ++++|+|++++++ +++..++++++....+++
T Consensus 49 ~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~ 128 (313)
T 2v78_A 49 SCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRN 128 (313)
T ss_dssp CEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHT
T ss_pred cEEEEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcC
Confidence 899999999999999999999999999999886 45689999998 8888999988776 556778887776667789
Q ss_pred ceEEEEcCcCCC-CCchHHHHHHHHHHHHhCCCEEEEECCCcc--h--hhhcHHHHHHhcccCc--EEEeec
Q 019265 278 TNIFIVEGYLFE-LPDTIRTITKACEVAHRSGALVAVTASDVT--C--IERHYDDFWYEYYMVL--IVVLEF 342 (343)
Q Consensus 278 adiv~isG~~l~-~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~--~~~~~e~l~elL~~vD--Ilf~~~ 342 (343)
+++||++||.+. .+...+.+.++++.+++. +||++... + .+...+.+.++++++| |+++|.
T Consensus 129 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~ 196 (313)
T 2v78_A 129 SRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDP 196 (313)
T ss_dssp SSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECH
T ss_pred CCEEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcH
Confidence 999999988531 111246666777776554 89998632 2 1223467788999999 999984
No 37
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.88 E-value=2.8e-22 Score=190.69 Aligned_cols=178 Identities=10% Similarity=0.032 Sum_probs=140.1
Q ss_pred CCCCCCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCC
Q 019265 117 SVLPERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKP 196 (343)
Q Consensus 117 ~~~~~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~ 196 (343)
+...++++|+++|++++|+++.++. .| +++. +........+||+++|+|++|++||.
T Consensus 15 ~~~~~~~~v~viG~~~iD~~~~~~~-----------------~p-~g~~---~~~~~~~~~~GG~~~NvA~~la~LG~-- 71 (306)
T 3bf5_A 15 LYFQGMRFLAYFGHLNIDVLISVDS-----------------IP-REGS---VNVKDLRPRFGGTAGNFAIVAQKFRI-- 71 (306)
T ss_dssp ----CCEEEEEECCCEEEEEEECSC-----------------CC-SSEE---EECSEEEEEEEHHHHHHHHHHHHTTC--
T ss_pred eeccCCCcEEEECCceEEEEEecCC-----------------CC-CCce---EECcceEecCCChHHHHHHHHHHcCC--
Confidence 3445677899999999999998765 12 2221 12345778999999999999999999
Q ss_pred CCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeee-CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhcc
Q 019265 197 IGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPI-KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLI 275 (343)
Q Consensus 197 ~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~-~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i 275 (343)
++.++|.+|+| +|+.+++.|++.||+++++.+ .+.+|+++++++++ |+|+++.+++++..++ +++.
T Consensus 72 ------~~~~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~ga~~~~~-~~l~---- 138 (306)
T 3bf5_A 72 ------PFDLYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQGAMAAWA-PQLA---- 138 (306)
T ss_dssp ------CCEEEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEECTHHHHCC-CCCC----
T ss_pred ------CeEEEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeCChhhhhh-Hhhc----
Confidence 89999999999 999999999999999999864 55689999999987 9999999998766665 4432
Q ss_pred CCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++++||++++. .+.++++.|++ +++||++...+ ....+.+.++++++||+++|.
T Consensus 139 ~~~~~v~~~~~~--------~~~~~~~~a~~---~v~~D~~~~~~-~~~~~~~~~~l~~~dil~~N~ 193 (306)
T 3bf5_A 139 DEYEYVHFSTGP--------NYLDMAKSIRS---KIIFDPSQEIH-KYSKDELKKFHEISYMSIFND 193 (306)
T ss_dssp SCEEEEEECSSS--------SHHHHHHHCCS---EEEECCGGGGG-GSCHHHHHHHHHHCSEEEEEH
T ss_pred CCCCEEEECChH--------HHHHHHHHhCC---cEEEcCchhhh-hccHHHHHHHHhcCCEEEcCH
Confidence 689999999764 34566777664 99999985322 223567888999999999984
No 38
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.87 E-value=4.6e-21 Score=182.22 Aligned_cols=178 Identities=15% Similarity=0.070 Sum_probs=142.4
Q ss_pred ccEEEEcCceeee-EEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 123 WDVLGLGQAMVDF-SGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 123 ~~VlviG~~~vDi-i~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
|-+.+.+++++|+ ++.++. +.+|.. .....+...+||++.|+|++|++||.
T Consensus 3 mi~tvt~np~iD~~~~~v~~-------~~~g~~--------------~~~~~~~~~~GG~~~NvA~~la~LG~------- 54 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRGE-------LEKRKT--------------NRVIKTEFDCGGKGLHVSGVLSKFGI------- 54 (320)
T ss_dssp CEEEEESSCEEEEEEEESSS-------CCTTSC--------------CCCSEEEEEEESHHHHHHHHHHHHTC-------
T ss_pred eEEEEecchHHeeeEEEcCC-------ccCCCe--------------eEeceeeecCCchHHHHHHHHHHcCC-------
Confidence 4466678999999 999875 123321 22356789999999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCC--eEEEEecCCCCCCCCchhh------hh
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQ--RAMLAYQGTSSTINYDPCL------VN 273 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGe--Rt~i~~~Ga~~~l~~~di~------~~ 273 (343)
++.++|.+|+| +|+.+++.|++.||+++++...+.+|+.++++++ +|+ |+++..+++ .++++++. .+
T Consensus 55 -~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~-~g~~~~~~~~~~g~--~~~~~~~~~~~~~~~~ 129 (320)
T 3ie7_A 55 -KNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLS-DDTNGSTMIPEAGF--TVSQTNKDNLLKQIAK 129 (320)
T ss_dssp -CEEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEE-TTCSCCEEEECCCC--CCCHHHHHHHHHHHHH
T ss_pred -CeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCCCCceEEEEEE-CCCceeEEEeCCCC--CCCHHHHHHHHHHHHH
Confidence 89999999999 9999999999999999999433348999999998 888 998877774 46655543 25
Q ss_pred ccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcc-cCcEEEeec
Q 019265 274 LISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYY-MVLIVVLEF 342 (343)
Q Consensus 274 ~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~-~vDIlf~~~ 342 (343)
.+++++++|++|+... ....+.+.++++.+++.|++++|||+. +.+++++. ++||+++|.
T Consensus 130 ~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~l~~~l~~~~dil~~N~ 190 (320)
T 3ie7_A 130 KVKKEDMVVIAGSPPP-HYTLSDFKELLRTVKATGAFLGCDNSG--------EYLNLAVEMGVDFIKPNE 190 (320)
T ss_dssp HCCTTCEEEEESCCCT-TCCHHHHHHHHHHHHHHTCEEEEECCH--------HHHHHHHHHCCSEECCBT
T ss_pred HhcCCCEEEEeCCCCC-CCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHHHhcCCeEEeeCH
Confidence 6889999999998532 123688999999999999999999963 23455554 999999985
No 39
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.87 E-value=2.5e-21 Score=185.42 Aligned_cols=183 Identities=16% Similarity=0.173 Sum_probs=142.1
Q ss_pred CCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCC
Q 019265 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (343)
Q Consensus 121 ~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~ 200 (343)
..|.++++|++++|+++.++. +.+|....+. +...+...+||+++|+|++|++||.
T Consensus 11 ~~~~~~v~G~~~vD~~~~~~~-------~~~g~~~~~s-----------~~~~~~~~~GG~~~NvA~~la~LG~------ 66 (331)
T 2ajr_A 11 HHMVLTVTLNPALDREIFIED-------FQVNRLYRIN-----------DLSKTQMSPGGKGINVSIALSKLGV------ 66 (331)
T ss_dssp -CCEEEEESSCEEEEEEECTT-------CCSSCEEECC-----------SGGGEEEEEESHHHHHHHHHHHTTC------
T ss_pred cceEEEEecchHHeEEEEcCC-------ccCCceEEec-----------cccceEEecCcHHHHHHHHHHHcCC------
Confidence 468899999999999999875 1233222110 1146788999999999999999999
Q ss_pred CCceEEEEEcCCChHHHHHHHHHHhCC--CCcceeeeCCCCceEEEEEECCCCCe-EEEEecCCCCCCCCchhh------
Q 019265 201 ALNVAMTGSVGSDPLGGFYRAKLRRAN--VAFCSEPIKDGTTGTVIVLTTPDAQR-AMLAYQGTSSTINYDPCL------ 271 (343)
Q Consensus 201 ~~~v~lig~VG~D~~G~~I~~~L~~~G--Vd~~~v~~~~~~Tg~~iVlid~dGeR-t~i~~~Ga~~~l~~~di~------ 271 (343)
++.++|.+|+| +|+.+++.|++.| |+++++...+ .|++++++++++|+| +++..+++ .++++++.
T Consensus 67 --~~~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~ 140 (331)
T 2ajr_A 67 --PSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRY 140 (331)
T ss_dssp --CEEEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHH
T ss_pred --CeEEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHH
Confidence 89999999998 9999999999999 9999987654 588888888878999 77666665 36655442
Q ss_pred hhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcc---cCcEEEeec
Q 019265 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYY---MVLIVVLEF 342 (343)
Q Consensus 272 ~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~---~vDIlf~~~ 342 (343)
.+.+.+++++|++|+... ..+.+.+.++++.|+++|++++|||+. +.+.++++ ++||+++|.
T Consensus 141 ~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~~~dil~~N~ 205 (331)
T 2ajr_A 141 KMTLSKVDCVVISGSIPP-GVNEGICNELVRLARERGVFVFVEQTP--------RLLERIYEGPEFPNVVKPDL 205 (331)
T ss_dssp HHHHTTCSEEEEESCCCT-TSCTTHHHHHHHHHHHTTCEEEEECCH--------HHHHHHHHSSCCCSEECCCC
T ss_pred HHhcccCCEEEEECCCCC-CCCHHHHHHHHHHHHHcCCEEEEECCh--------HHHHHHHhcCCCCeEEEeCc
Confidence 235689999999987532 112577889999999999999999974 23455555 499999985
No 40
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.86 E-value=1.8e-21 Score=182.62 Aligned_cols=174 Identities=17% Similarity=0.155 Sum_probs=133.5
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
+++|+++|++++|++. . ...+||+++|+|++|++||.
T Consensus 3 ~~~v~viG~~~~D~~p---~---------------------------------~~~~GG~~~N~A~~la~LG~------- 39 (296)
T 2qhp_A 3 NNIIVGMGEALWDVLP---E---------------------------------GKKIGGAPANFAYHVSQFGF------- 39 (296)
T ss_dssp CCEEEEESCCEEEEET---T---------------------------------EEEEECHHHHHHHHHHHTTC-------
T ss_pred cceEEEEchhheEecC---C---------------------------------CCCCCCHHHHHHHHHHHcCC-------
Confidence 3579999999999971 0 14699999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC-CCCceEEEEEECCCCCeEEEEecCC-CCCCCCchhhhhccCCce
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIVLTTPDAQRAMLAYQGT-SSTINYDPCLVNLISKTN 279 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~-~~~Tg~~iVlid~dGeRt~i~~~Ga-~~~l~~~di~~~~i~~ad 279 (343)
++.++|.+|+|.+|+.+++.|++.|| +++.+. +.+|++++++++++|+|++.++++. ...+.+.+...+.+++++
T Consensus 40 -~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 116 (296)
T 2qhp_A 40 -DSRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTDELKRLALNTR 116 (296)
T ss_dssp -EEEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCCHHHHHHHHTEE
T ss_pred -CeeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcchhhHhhhcCCC
Confidence 89999999999999999999999999 666653 6789999998888899988887765 345655554455678999
Q ss_pred EEEEcCcCCCCCchHHHHHHHHHHHHh-CCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 280 IFIVEGYLFELPDTIRTITKACEVAHR-SGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 280 iv~isG~~l~~p~s~~~i~~ll~~Ak~-~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++|++++....+...+.+.++++.+++ .++++++|++..... ...+.+.++++++||+++|.
T Consensus 117 ~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~ 179 (296)
T 2qhp_A 117 AVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDF-YTKEVLRESFKRCNILKIND 179 (296)
T ss_dssp EEEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTC-CCHHHHHHHHHHCSEEEEEH
T ss_pred EEEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccc-cCHHHHHHHHHHCCEEECCH
Confidence 999987643222235778888888887 699999999764211 02456788999999999984
No 41
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.86 E-value=9.1e-21 Score=182.58 Aligned_cols=188 Identities=17% Similarity=0.186 Sum_probs=144.7
Q ss_pred CCccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCC
Q 019265 121 ERWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGP 200 (343)
Q Consensus 121 ~~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~ 200 (343)
..|+|+++|+.+.++...... ++ +....+...+||+++|+|++|++||.
T Consensus 11 ~~~~~~~~ge~l~~~~~~~~~-------------~~------------~~~~~~~~~~GG~~~NvA~~la~LG~------ 59 (351)
T 2afb_A 11 HHMKVVTFGEIMLRLSPPDHK-------------RI------------FQTDSFDVTYGGAEANVAAFLAQMGL------ 59 (351)
T ss_dssp CCCEEEEESCCEEEEECSTTC-------------CG------------GGCSEEEEEEECHHHHHHHHHHHTTS------
T ss_pred ccceEEEechhhheecCCCCc-------------cc------------cccceeeEecCChHHHHHHHHHHcCC------
Confidence 468999999999986632110 00 11346778999999999999999999
Q ss_pred CCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCe-EEEEecC---CCCCCCCchhhh-hcc
Q 019265 201 ALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQR-AMLAYQG---TSSTINYDPCLV-NLI 275 (343)
Q Consensus 201 ~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeR-t~i~~~G---a~~~l~~~di~~-~~i 275 (343)
++.++|.||+|.+|+.+++.|++.||+++++...+.+|+++++.+++ ++| +++.+.+ +...++++++.. ..+
T Consensus 60 --~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~-~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~ 136 (351)
T 2afb_A 60 --DAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGA-SQRPSKVVYDRAHSAISEAKREDFDWEKIL 136 (351)
T ss_dssp --EEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCB-TTBCCEEEEECTTCTTTTCCGGGCCHHHHT
T ss_pred --CeEEEEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecC-CCCcceEEEeCCCChhhhCChhhCCHHHhh
Confidence 89999999999999999999999999999988766789998887764 544 5666543 334566666543 356
Q ss_pred CCceEEEEcCcCCCC-CchHHHHHHHHHHHHhCCCEEEEECCCcc--hh-hhcHHHHHHhcccCcEEEeec
Q 019265 276 SKTNIFIVEGYLFEL-PDTIRTITKACEVAHRSGALVAVTASDVT--CI-ERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 276 ~~adiv~isG~~l~~-p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~--~~-~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++++||++|+.... +...+.+.++++.+++.|++++|||+... +. +...+.+.++++++||+++|.
T Consensus 137 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~ 207 (351)
T 2afb_A 137 DGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANE 207 (351)
T ss_dssp TTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECH
T ss_pred cCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecH
Confidence 899999999986422 22457889999999999999999998531 21 224567889999999999984
No 42
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.85 E-value=2e-20 Score=178.48 Aligned_cols=178 Identities=20% Similarity=0.233 Sum_probs=139.1
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
+|.++++|++++|+++.++. + .+| +. +........+||+++|+|++|++||.
T Consensus 2 ~m~i~v~g~~~~D~~~~v~~--~-----~~g-----------~~---~~~~~~~~~~GG~~~NvA~~la~LG~------- 53 (323)
T 2f02_A 2 SLIVTVTMNPSIDISYLLDH--L-----KLD-----------TV---NRTSQVTKTPGGKGLNVTRVIHDLGG------- 53 (323)
T ss_dssp CCEEEEESSCEEEEEEECSC--C-----CTT-----------SE---EEESCEEEEEESHHHHHHHHHHHHTC-------
T ss_pred ceEEEEecCceeEEEEecCC--c-----ccC-----------CE---EEeceEEEcCCcHHHHHHHHHHHcCC-------
Confidence 36899999999999999875 1 222 22 12346788999999999999999999
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhh------hcc
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV------NLI 275 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~------~~i 275 (343)
++.++|.+|+ .+|+++++.|++.||+++++.+.+ .|++++++++++ +|+++..+++ .++++++.. +.+
T Consensus 54 -~~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~ 127 (323)
T 2f02_A 54 -DVIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEG-NQTEILEAGP--TVSPEEISNFLENFDQLI 127 (323)
T ss_dssp -CEEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHH
T ss_pred -CeEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCC-CeEEEECCCC--CCCHHHHHHHHHHHHHhc
Confidence 8999999996 699999999999999999987654 488888888866 7777777775 366554321 246
Q ss_pred CCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhc---ccCcEEEeec
Q 019265 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEY---YMVLIVVLEF 342 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL---~~vDIlf~~~ 342 (343)
++++++|++|+.... ...+.+.++++.+++.|++++|||+.. .+.+++ +++|++++|.
T Consensus 128 ~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~Dp~~~--------~~~~~l~~~~~~dil~~N~ 188 (323)
T 2f02_A 128 KQAEIVTISGSLAKG-LPSDFYQELVQKAHAQEVKVLLDTSGD--------SLRQVLQGPWKPYLIKPNL 188 (323)
T ss_dssp TTCSEEEEESCCCBT-SCTTHHHHHHHHHHHTTCEEEEECCTH--------HHHHHHHSSCCCSEECCBH
T ss_pred cCCCEEEEECCCCCC-CChHHHHHHHHHHHHCCCEEEEECChH--------HHHHHHhccCCCeEEecCH
Confidence 899999999875421 125678899999999999999999752 234455 5899999984
No 43
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.85 E-value=3.7e-20 Score=174.93 Aligned_cols=176 Identities=18% Similarity=0.163 Sum_probs=136.3
Q ss_pred cEEEE-cCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCC
Q 019265 124 DVLGL-GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (343)
Q Consensus 124 ~Vlvi-G~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~ 202 (343)
+|+++ |++++|+++.++. +.+| +. .........+||++.|+|++|++||.
T Consensus 3 ~I~~v~g~~~~D~~~~~~~-------~~~g-----------~~---~~~~~~~~~~GG~~~NvA~~la~LG~-------- 53 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITPQ-------IYPE-----------GK---LRCTAPVFEPGGGGINVARAIAHLGG-------- 53 (309)
T ss_dssp CEEEECSSCEEEEEEEESC-------CCSS-----------SE---EECCCCEEEEESHHHHHHHHHHHTTC--------
T ss_pred eEEEEeccchheEEEEcCC-------CcCC-----------Ce---eeccceeecCCchHHHHHHHHHHcCC--------
Confidence 57755 6999999999875 1222 22 22346778999999999999999999
Q ss_pred ceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEE-ECCCCCeEEEEecCCCCCCCCchhh------hhcc
Q 019265 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVL-TTPDAQRAMLAYQGTSSTINYDPCL------VNLI 275 (343)
Q Consensus 203 ~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVl-id~dGeRt~i~~~Ga~~~l~~~di~------~~~i 275 (343)
++.++|.+|+| +|+.+++.|++.||+++++...+ .|++++++ ++++|+|+++..+++. ++++++. .+.+
T Consensus 54 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~ 129 (309)
T 3cqd_A 54 SATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGAA--LNEDEFRQLEEQVLEIE 129 (309)
T ss_dssp CEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCCC--CCHHHHHHHHHHHHTSC
T ss_pred CeEEEEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCCC--CCHHHHHHHHHHHHHhh
Confidence 89999999998 99999999999999999987654 47777777 8888999888777753 5554432 2346
Q ss_pred CCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHh-cccC-cEEEeec
Q 019265 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYE-YYMV-LIVVLEF 342 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~el-L~~v-DIlf~~~ 342 (343)
++ +++|++|+.... ...+.+.++++.++++|++++|||+.. .+.+. .+++ |++++|.
T Consensus 130 ~~-~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~~~~dil~~N~ 188 (309)
T 3cqd_A 130 SG-AILVISGSLPPG-VKLEKLTQLISAAQKQGIRCIVDSSGE--------ALSAALAIGNIELVKPNQ 188 (309)
T ss_dssp TT-CEEEEESCCCTT-CCHHHHHHHHHHHHTTTCEEEEECCHH--------HHHHHTTTCCBSEECCBH
T ss_pred cC-CEEEEECCCCCC-CCHHHHHHHHHHHHHcCCeEEEECChH--------HHHHHHHhCCCEEEeeCH
Confidence 78 999999885421 236788999999999999999999742 13333 3788 9999884
No 44
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.85 E-value=4e-20 Score=174.69 Aligned_cols=177 Identities=18% Similarity=0.171 Sum_probs=137.9
Q ss_pred cEEEE-cCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCC
Q 019265 124 DVLGL-GQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPAL 202 (343)
Q Consensus 124 ~Vlvi-G~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~ 202 (343)
+|+++ +++++|+++.+++ +.+| +. +.......++||+++|+|++|++||.
T Consensus 3 ~i~~v~~n~~~D~~~~v~~-------~~~g-----------~~---~~~~~~~~~~GG~~~NvA~~la~LG~-------- 53 (309)
T 3umo_A 3 RIYTLTLAPSLDSATITPQ-------IYPE-----------GK---LRCTAPVFEPGGGGINVARAIAHLGG-------- 53 (309)
T ss_dssp CEEEECSSCEEEEEEEESC-------CCSS-----------SE---EECCCCEEEEESHHHHHHHHHHHTTC--------
T ss_pred cEEEEecchhheEEEEcCc-------ccCC-----------Ce---EEeceeeecCCchHHHHHHHHHHcCC--------
Confidence 36666 6899999999976 1222 22 23457889999999999999999999
Q ss_pred ceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEE-CCCCCeEEEEecCCCCCCCCchhhh-----hccC
Q 019265 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLT-TPDAQRAMLAYQGTSSTINYDPCLV-----NLIS 276 (343)
Q Consensus 203 ~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVli-d~dGeRt~i~~~Ga~~~l~~~di~~-----~~i~ 276 (343)
++.++|.||+| +|+.+++.|++.||+++++...+ +|+++++++ +++|+|+++.+++++ ++++++.. +.+.
T Consensus 54 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~ 129 (309)
T 3umo_A 54 SATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGAA--LNEDEFRQLEEQVLEIE 129 (309)
T ss_dssp CEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCCC--CCHHHHHHHHHHHTTSC
T ss_pred CeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCCC--CCHHHHHHHHHHHHhcC
Confidence 89999999999 99999999999999999987653 466555544 448999999888864 66555421 1246
Q ss_pred CceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccC--cEEEeec
Q 019265 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMV--LIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~v--DIlf~~~ 342 (343)
.++++|++|+... ....+.+.++++.++++|++++|||+. +.+.+++++. ||+++|.
T Consensus 130 ~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~v~~D~~~--------~~l~~~l~~~~~dil~~N~ 188 (309)
T 3umo_A 130 SGAILVISGSLPP-GVKLEKLTQLISAAQKQGIRCIVDSSG--------EALSAALAIGNIELVKPNQ 188 (309)
T ss_dssp TTCEEEEESCCCT-TCCHHHHHHHHHHHHHTTCEEEEECCH--------HHHHHHTSSCCBSEECCBH
T ss_pred CCCEEEEEccCCC-CCCHHHHHHHHHHHHhcCCEEEEECCc--------HHHHHHhccCCCeEEEeCH
Confidence 7889999998532 123688999999999999999999963 3467778874 9999884
No 45
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.84 E-value=3.6e-20 Score=177.55 Aligned_cols=187 Identities=20% Similarity=0.162 Sum_probs=140.8
Q ss_pred ccCCCCCCCC-ccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHH
Q 019265 113 SGSASVLPER-WDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALAR 191 (343)
Q Consensus 113 ~~~~~~~~~~-~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLAr 191 (343)
++|-+..+.. |.++++|++++|+++.++. +.+|.. +....+...+||+++|+|++|++
T Consensus 10 ~~~~~~~~~~~Mi~~v~G~~~~D~~~~~~~-------~~~g~~--------------~~~~~~~~~~GG~~~NvA~~la~ 68 (330)
T 2jg1_A 10 HSSGLVPRGSHMILTLTLNPSVDISYPLTA-------LKLDDV--------------NRVQEVSKTAGGKGLNVTRVLAQ 68 (330)
T ss_dssp ---CCCCCSSCCEEEEESSCEEEEEEEESC-------CCTTSE--------------EEESCCEEEEECHHHHHHHHHHH
T ss_pred cccCccCCCCcEEEEEecchhheEEEecCC-------ccCCce--------------EEeceEEEcCCchHHHHHHHHHH
Confidence 3444555543 4455779999999999875 122321 12345778999999999999999
Q ss_pred hCCCCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhh
Q 019265 192 LGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL 271 (343)
Q Consensus 192 LG~~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~ 271 (343)
||. ++.++|.||+ .+|+.+++.|++.||+++++...+ .|++++++++++ +|+++..+++ .++++++.
T Consensus 69 LG~--------~~~~i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~-~~~~~~~~g~--~~~~~~~~ 135 (330)
T 2jg1_A 69 VGE--------PVLASGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEG-QQTEILEQGP--EIDNQEAA 135 (330)
T ss_dssp HTC--------CEEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETT-EEEEEEECCC--BCCHHHHH
T ss_pred hCC--------CeEEEEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCC-CcEEEECCCC--CCCHHHHH
Confidence 999 8999999996 799999999999999999987654 488888888866 7777766665 35554432
Q ss_pred h------hccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcc---cCcEEEeec
Q 019265 272 V------NLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYY---MVLIVVLEF 342 (343)
Q Consensus 272 ~------~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~---~vDIlf~~~ 342 (343)
. +.+++++++|++|+... ....+.+.++++.|+++|++++||++. +.+.++++ ++||+++|.
T Consensus 136 ~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~l~~~l~~~~~~dil~~N~ 206 (330)
T 2jg1_A 136 GFIKHFEQMMEKVEAVAISGSLPK-GLNQDYYAQIIERCQNKGVPVILDCSG--------ATLQTVLENPYKPTVIKPNI 206 (330)
T ss_dssp HHHHHHHHHGGGCSEEEEESCCCB-TSCTTHHHHHHHHHHTTTCCEEEECCH--------HHHHHHHTSSSCCSEECCBH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCC-CCCHHHHHHHHHHHHHCCCEEEEECCc--------HHHHHHHhccCCceEEEeCH
Confidence 1 34678999999987542 113567889999999999999999973 23556666 899999984
No 46
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.83 E-value=2.7e-20 Score=180.69 Aligned_cols=187 Identities=18% Similarity=0.166 Sum_probs=137.0
Q ss_pred CCCCCCccEEEEcCceeeeEEe--cChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCC
Q 019265 117 SVLPERWDVLGLGQAMVDFSGM--VDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGG 194 (343)
Q Consensus 117 ~~~~~~~~VlviG~~~vDii~~--vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~ 194 (343)
+..+++++|+|+|++++|++.. ++. + ..+.|.+. +........+||+ +|+|++|++||.
T Consensus 48 ~~~~~~~~ilvvG~~~~D~~~~g~v~r-~------------~p~~p~~~-----~~~~~~~~~~GG~-~NvA~~la~LG~ 108 (352)
T 4e84_A 48 REQLARSRVLVVGDVMLDRYWFGNVDR-I------------SPEAPVPV-----VHVQRQEERLGGA-ANVARNAVTLGG 108 (352)
T ss_dssp HHHHTTCEEEEEECEEEEEEEEEEEEE-E------------CSSSSSEE-----EEEEEEEEEEEEH-HHHHHHHHHTTC
T ss_pred HHhcCCCcEEEECccceEEEEeecccc-c------------CCCCCcce-----EEeeEEEEecChH-HHHHHHHHHcCC
Confidence 3345678899999999999987 322 0 00112221 1234677899997 899999999999
Q ss_pred CCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecC-CCCCCCCc--hhh
Q 019265 195 KPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQG-TSSTINYD--PCL 271 (343)
Q Consensus 195 ~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~G-a~~~l~~~--di~ 271 (343)
++.++|.||+|.+|+.+++.|++.||++..+...+.+|+++++++++++++..+.+.+ .+..+..+ +..
T Consensus 109 --------~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (352)
T 4e84_A 109 --------QAGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLARF 180 (352)
T ss_dssp --------EEEEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHHHH
T ss_pred --------CEEEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHHHH
Confidence 8999999999999999999999999999655556678999999998665555454433 22211111 122
Q ss_pred hhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 272 ~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
.+.++++++||++||.. .+ .+.+.++++.|+++|++|+||+++.. +++++++|++++|.
T Consensus 181 ~~~l~~~~~v~~~g~~~-~~--~~~~~~~~~~a~~~g~~v~~D~~~~~---------~~~l~~~dil~pN~ 239 (352)
T 4e84_A 181 DVLLPQHDVVLMSDYAK-GG--LTHVTTMIEKARAAGKAVLVDPKGDD---------WARYRGASLITPNR 239 (352)
T ss_dssp HHHGGGCSEEEEECCSS-SS--CSSHHHHHHHHHHTTCEEEEECCSSC---------CSTTTTCSEECCBH
T ss_pred HHhcccCCEEEEeCCCC-CC--HHHHHHHHHHHHhcCCEEEEECCCcc---------hhhccCCcEEcCCH
Confidence 45688999999998752 11 23478889999999999999998632 24678889988874
No 47
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.82 E-value=3.4e-19 Score=168.31 Aligned_cols=174 Identities=16% Similarity=0.204 Sum_probs=136.3
Q ss_pred EEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCCce
Q 019265 125 VLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALNV 204 (343)
Q Consensus 125 VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~~v 204 (343)
+.+.|++++|+++.+++ +.+|.. +........+||++.|+|++|++||. ++
T Consensus 3 ~tv~~n~~~D~~~~~~~-------~~~g~~--------------~~~~~~~~~~GG~~~N~A~~la~LG~--------~~ 53 (306)
T 2abq_A 3 YTVTLNPSIDYIVQVEN-------FQQGVV--------------NRSERDRKQPGGKGINVSRVLKRLGH--------ET 53 (306)
T ss_dssp EEEESSCEEEEEEECTT-------CCSSSE--------------EECSEEEEEEECHHHHHHHHHHHTTC--------CC
T ss_pred EEEecCchheEEEEcCC-------cccCCe--------------EEeceeEecCCchHHHHHHHHHHcCC--------Cc
Confidence 45669999999999875 123322 12346778999999999999999999 89
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhh--h---ccCCce
Q 019265 205 AMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--N---LISKTN 279 (343)
Q Consensus 205 ~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~--~---~i~~ad 279 (343)
.++|.+|+ .+|+.+++.|++.||+++++...+ .|++++++ ++|+|+++..+++ .++++++.. + .+++++
T Consensus 54 ~~~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~ 127 (306)
T 2abq_A 54 KALGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI--KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGD 127 (306)
T ss_dssp EEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE--ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTC
T ss_pred eEEEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE--eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCC
Confidence 99999998 899999999999999999988654 47888766 4789987666664 466555422 1 167899
Q ss_pred EEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcc-cCcEEEeec
Q 019265 280 IFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYY-MVLIVVLEF 342 (343)
Q Consensus 280 iv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~-~vDIlf~~~ 342 (343)
++|++|+... ....+.+.++++.++++|++++|||+. +.+.++++ ++||+++|.
T Consensus 128 ~v~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~dil~~N~ 182 (306)
T 2abq_A 128 VLVLAGSVPQ-AMPQTIYRSMTQIAKERGAFVAVDTSG--------EALHEVLAAKPSFIKPNH 182 (306)
T ss_dssp EEEEESCCCT-TSCTTHHHHHHHHHHTTTCEEEEECCH--------HHHHHHGGGCCSEECCBH
T ss_pred EEEEecCCCC-CCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHHHhcCCcEEecCH
Confidence 9999988542 112567889999999999999999963 24677888 999999984
No 48
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.81 E-value=6.8e-19 Score=165.79 Aligned_cols=175 Identities=16% Similarity=0.113 Sum_probs=134.9
Q ss_pred cEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCCCc
Q 019265 124 DVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPALN 203 (343)
Q Consensus 124 ~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~~~ 203 (343)
-+.+.|++++|+++.+++ + .+| +. +........+||++.|+|++|++||. +
T Consensus 2 i~tvt~n~~~D~~~~~~~-~------~~g-----------~~---~~~~~~~~~~GG~~~N~A~~la~LG~--------~ 52 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTND-F------KID-----------GL---NRATATYKFAGGKGINVSRVLKTLDV--------E 52 (306)
T ss_dssp EEEEESSCEEEEEEECSS-C------CTT-----------SE---EECSEEEEEEESHHHHHHHHHHHTTC--------C
T ss_pred EEEEecCceEEEEEEcCC-c------ccC-----------ce---EEeceeEecCCchHHHHHHHHHHcCC--------C
Confidence 356779999999999875 1 223 22 22346788999999999999999999 8
Q ss_pred eEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhh---hc--cCCc
Q 019265 204 VAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV---NL--ISKT 278 (343)
Q Consensus 204 v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~---~~--i~~a 278 (343)
+.++|.+|+ .+|+++++.|++.||+++++.+.+ .|++++++ ++|+|+++..+++ .++++++.. .. ++++
T Consensus 53 ~~~~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~--~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~ 126 (306)
T 2jg5_A 53 STALGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL--KTGQETEINAPGP--HITSTQFEQLLQQIKNTTSE 126 (306)
T ss_dssp CEEEEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE--ESSSEEEEECCCC--CCCHHHHHHHHHHHTTCCTT
T ss_pred eeEEEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE--cCCCEEEEECCCC--CCCHHHHHHHHHHHHhccCC
Confidence 999999999 699999999999999999987654 47887766 4789987777775 355554421 11 6789
Q ss_pred eEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcc-cCcEEEeec
Q 019265 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYY-MVLIVVLEF 342 (343)
Q Consensus 279 div~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~-~vDIlf~~~ 342 (343)
+++|++|+.... ...+.+.++++.++++|++++||++. +.+.++++ ++|++++|.
T Consensus 127 ~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~dil~~N~ 182 (306)
T 2jg5_A 127 DIVIVAGSVPSS-IPSDAYAQIAQITAQTGAKLVVDAEK--------ELAESVLPYHPLFIKPNK 182 (306)
T ss_dssp CEEEEESCCCTT-SCTTHHHHHHHHHHHHCCEEEEECCH--------HHHHHHGGGCCSEECCBH
T ss_pred CEEEEeCCCCCC-CChHHHHHHHHHHHHCCCEEEEECCh--------HHHHHHHhcCCeEEecCH
Confidence 999999875321 12467888999999999999999973 23556777 699999884
No 49
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.78 E-value=1.1e-18 Score=165.80 Aligned_cols=172 Identities=14% Similarity=0.079 Sum_probs=130.2
Q ss_pred CccEEEEcCceeeeEEecChhHHHhhccccCcceecccccccceeeecccCceEEecCChHHHHHHHHHHhCCCCCCCCC
Q 019265 122 RWDVLGLGQAMVDFSGMVDDDFLERLGLEKGTRKLVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGGKPIGGPA 201 (343)
Q Consensus 122 ~~~VlviG~~~vDii~~vd~~fl~~~~L~~g~~~lv~~p~~~~~~~~i~~~~~~~~~GGsa~NvA~aLArLG~~~~~~~~ 201 (343)
.++|+|+|++++|++.... ......+||+++|+|++|++||..
T Consensus 2 ~~~ilviG~~~iD~~~~~~-------------------------------~~~~~~~GG~~~NvA~~la~LG~~------ 44 (313)
T 3kd6_A 2 SLSLLVIGSLAFDDIETPF-------------------------------GRSDNTLGGSSTYIALSASYFTDE------ 44 (313)
T ss_dssp -CCEEEESCCEEEEEECSS-------------------------------CEEEEEEECHHHHHHHHHTTTCSS------
T ss_pred CccEEEEeEEEEeeecCCC-------------------------------CcccccCCCHHHHHHHHHHHhCCC------
Confidence 3689999999999996321 134678999999999999999982
Q ss_pred CceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC-CCCceEEEE--EECCCCCeEEEEecCCCCCCCCchhhhhccCCc
Q 019265 202 LNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK-DGTTGTVIV--LTTPDAQRAMLAYQGTSSTINYDPCLVNLISKT 278 (343)
Q Consensus 202 ~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~-~~~Tg~~iV--lid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~a 278 (343)
++.++|.||+| +|+.+++.|++.||+++++.+. +.+|....- .++.++++++....++...+.+. ..+.++++
T Consensus 45 -~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 120 (313)
T 3kd6_A 45 -PIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH--VPQYYRDS 120 (313)
T ss_dssp -CEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC--CCGGGTTC
T ss_pred -ceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc--chHHHccC
Confidence 49999999999 9999999999999999999864 466743211 12335667777776665555543 23457899
Q ss_pred eEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 279 div~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++|++++ + ++...++++.+ +.+.+++|||.+ .+.+...+.+.++++++||+++|.
T Consensus 121 ~~v~~~~~----~--~~~~~~~~~~~-~~~~~v~~Dp~~-~~~~~~~~~~~~~l~~~dil~~N~ 176 (313)
T 3kd6_A 121 KFVCLGNI----D--PELQLKVLDQI-DDPKLVVCDTMN-FWIEGKPEELKKVLARVDVFIVND 176 (313)
T ss_dssp SEEEECSS----C--HHHHHHHHTTC-SSCSEEEEECCH-HHHHHCHHHHHHHHTTCSEEEEEH
T ss_pred CEEEEcCC----C--HHHHHHHHHHH-hhCCEEEEcChh-hhhhhhHHHHHHHHhcCCEEEeCH
Confidence 99999753 2 45566777777 678999999953 344456778889999999999984
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.73 E-value=4.7e-18 Score=160.39 Aligned_cols=150 Identities=10% Similarity=0.006 Sum_probs=113.7
Q ss_pred ceEEecCChHHHHHHHHHHhCCCCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCC
Q 019265 173 SYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQ 252 (343)
Q Consensus 173 ~~~~~~GGsa~NvA~aLArLG~~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGe 252 (343)
.....+||+++|+|++|++||. ++.++|.||+|. +.+++.|++.||++.++.. +.+|+++.++ +++|+
T Consensus 30 ~~~~~~GG~~~NvA~~la~LG~--------~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~-~~~g~ 97 (298)
T 1vk4_A 30 KREIAYGGGVVMGAITSSLLGV--------KTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRY-GSDPD 97 (298)
T ss_dssp EEEEEEECHHHHHHHHHHHTTC--------EEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC------
T ss_pred eEEEecCCHHHHHHHHHHHcCC--------ceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEE-cCCCC
Confidence 4567899999999999999999 899999999998 7899999999999998865 4567777665 55788
Q ss_pred eEEEEecCCCCCCCCchhhhhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCc-------chhhhcH
Q 019265 253 RAMLAYQGTSSTINYDPCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDV-------TCIERHY 325 (343)
Q Consensus 253 Rt~i~~~Ga~~~l~~~di~~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~-------~~~~~~~ 325 (343)
|+++.+.+++..++++++.. .+++++|++++... +...++++.++++|++++||+++. ......+
T Consensus 98 ~~~~~~~~~~~~l~~~~~~~---~~~~~v~~~~~~~~-----~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~ 169 (298)
T 1vk4_A 98 TRESFLISAADPFTESDLAF---IEGEAVHINPLWYG-----EFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDW 169 (298)
T ss_dssp CCEEEEEECCCCCCGGGGGG---CCSSEEEECCSSTT-----SSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCC
T ss_pred eeEEEeccccccCCHHHcCc---CCCCEEEECCcccc-----cccHHHHHHHHHcCCEEEEecCccccccccccccccch
Confidence 98888888887787776643 68999999887431 122356777888899999999741 0001122
Q ss_pred HHHHHhcccCcEEEeec
Q 019265 326 DDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 326 e~l~elL~~vDIlf~~~ 342 (343)
+.+.++++++||+++|.
T Consensus 170 ~~~~~~l~~~dil~~N~ 186 (298)
T 1vk4_A 170 EMKEKYLKYLDLFKVDS 186 (298)
T ss_dssp TTHHHHGGGCSEEEEEH
T ss_pred HHHHhhcccCCEEecCH
Confidence 35678899999999984
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=98.04 E-value=1.2e-06 Score=82.57 Aligned_cols=119 Identities=13% Similarity=0.116 Sum_probs=78.3
Q ss_pred ceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeC--CCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhh--hc----
Q 019265 203 NVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIK--DGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLV--NL---- 274 (343)
Q Consensus 203 ~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~--~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~--~~---- 274 (343)
.+.++|.||+|. |+++ |++.||++.++... ..+|++++ +.| ..++++++.. +.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~-------------~~g--~~l~~~~i~~~~~~~~~~ 72 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH-------------WKG--QVLNSDELQELYEGLRLN 72 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC-------------CCE--EECCHHHHHHHHHHHHHT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC-------------ccC--ccCCHHHHHHHHHHHHhc
Confidence 478899999999 9999 99999999988642 22343222 111 1344444421 11
Q ss_pred -cCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCC--EEEEECCCcc--------hh-hhcHHHHHH-hcccCcEEEee
Q 019265 275 -ISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGA--LVAVTASDVT--------CI-ERHYDDFWY-EYYMVLIVVLE 341 (343)
Q Consensus 275 -i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~--~V~fD~s~~~--------~~-~~~~e~l~e-lL~~vDIlf~~ 341 (343)
+.+++++++ |+.. .+...+.+.++++.++++|. +++|||+... +. +...+.+.+ +++++||+++|
T Consensus 73 ~~~~~~~v~~-G~~~-~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN 150 (312)
T 2yxt_A 73 NMNKYDYVLT-GYTR-DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPN 150 (312)
T ss_dssp TCCCCSEEEE-CCCC-CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCC
T ss_pred CCccCCEEEE-CCCC-CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCC
Confidence 678999886 5532 11235666788999998875 4899987532 11 124456765 89999999998
Q ss_pred c
Q 019265 342 F 342 (343)
Q Consensus 342 ~ 342 (343)
.
T Consensus 151 ~ 151 (312)
T 2yxt_A 151 Q 151 (312)
T ss_dssp H
T ss_pred H
Confidence 4
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=97.54 E-value=5.9e-05 Score=69.78 Aligned_cols=118 Identities=11% Similarity=0.140 Sum_probs=74.7
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhh------hh--ccCC
Q 019265 206 MTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCL------VN--LISK 277 (343)
Q Consensus 206 lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~------~~--~i~~ 277 (343)
.+|.+|.| ..+..|++.||++.++.. + ++.+..|.|. +.+ ..++++++. .+ .+++
T Consensus 26 ~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~---~~g--~~~~~~~~~~~~~~l~~~~~~~~ 88 (283)
T 2ddm_A 26 VYGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNTPHYDT---FYG--GAIPDEWFSGYLRALQERDALRQ 88 (283)
T ss_dssp SSSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSCTTSSC---CCE--EECCHHHHHHHHHHHHHTTCCTT
T ss_pred CCCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccCCCcCc---eee--eeCCHHHHHHHHHHHHhcCCccc
Confidence 37788887 345789999999988743 1 2225456654 222 233333331 11 4678
Q ss_pred ceEEEEcCcCCCCCchHHHHHHHHHHHHh--CCCEEEEECCCcc-----hhh-hcHHHH-HHhcccCcEEEeec
Q 019265 278 TNIFIVEGYLFELPDTIRTITKACEVAHR--SGALVAVTASDVT-----CIE-RHYDDF-WYEYYMVLIVVLEF 342 (343)
Q Consensus 278 adiv~isG~~l~~p~s~~~i~~ll~~Ak~--~G~~V~fD~s~~~-----~~~-~~~e~l-~elL~~vDIlf~~~ 342 (343)
+++|+++.+. .....+.+.++++.+++ .|++++|||+... +.. ...+.+ .++++++||+++|.
T Consensus 89 ~~~v~~G~l~--~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~ 160 (283)
T 2ddm_A 89 LRAVTTGYMG--TASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI 160 (283)
T ss_dssp CCEEEECCCS--CHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBH
T ss_pred CCEEEECCcC--CHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCH
Confidence 8999985432 11235778888999988 7999999987532 111 112333 46899999999984
No 53
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=96.35 E-value=0.051 Score=54.57 Aligned_cols=211 Identities=12% Similarity=0.052 Sum_probs=121.3
Q ss_pred CCCCCCCccEEEEcCceeeeEEecChhHHHhh----ccc------------------------------cCcceeccccc
Q 019265 116 ASVLPERWDVLGLGQAMVDFSGMVDDDFLERL----GLE------------------------------KGTRKLVNHEE 161 (343)
Q Consensus 116 ~~~~~~~~~VlviG~~~vDii~~vd~~fl~~~----~L~------------------------------~g~~~lv~~p~ 161 (343)
--+.|+.+.|++-=+++||.++..+..-++++ +.. .+....+..+.
T Consensus 21 ~~~~~~~~~i~~ayN~NVDai~~~~~~~i~~li~~~~~~~v~~~~~~~p~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~ 100 (474)
T 3drw_A 21 GHMIPEHLSIYTAYNANIAAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGKPAAVPLVNEK 100 (474)
T ss_dssp C-CCCTTCEEEEESCCEEEEEEECCHHHHHHHHHTSCHHHHHHHHHHCCSSBSSHHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred cccccccCceEEEecccEEEEEEcCHHHHHHHHHhcChHHhhhhhhcCCccCCCHHHHHHHHHHHHhCCCceEEecccHh
Confidence 34567778899999999999999877433222 110 11122222121
Q ss_pred ccceeeecccCc-eEEecCChHHHHHHHHHHhCCCCCCCCCCceEEEEEcCCChHHHHHHHHHHh---------------
Q 019265 162 RGRVLRAMDGCS-YKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRR--------------- 225 (343)
Q Consensus 162 ~~~~~~~i~~~~-~~~~~GGsa~NvA~aLArLG~~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~--------------- 225 (343)
..+.++. .-. ...+.||.|.-+|..||++|.+ +|.+.+..+....- +.|..
T Consensus 101 ~~~~~~~--~~~~~~~~~GGnA~imAn~La~lg~~-------~Vi~~~p~~sk~~~----~ll~~~i~~p~~e~g~l~l~ 167 (474)
T 3drw_A 101 MNEWFDK--TFRYEEERLGGQAGIIANTLAGLKIR-------KVIAYTPFLPKRLA----ELFKKGVLYPVVENGELQFK 167 (474)
T ss_dssp HHHHHHH--HCCCSEEEEESHHHHHHHHHHHTTCS-------EEEECCSCCCHHHH----TTSCTTEEEEEESSSSEEEE
T ss_pred HHHHHHH--hcccceEecCChHHHHHHHHHHcCCC-------cEEEecCcCCHHHH----HhcCCcceeecccCCceeec
Confidence 1111110 112 2578999999999999999982 36667776664333 33321
Q ss_pred ---------CCCCcceeeeCCCCceEEE-----EEECCCCCeEEEEecCCCC-CCCC-chhh---hhccCCceEEEEcCc
Q 019265 226 ---------ANVAFCSEPIKDGTTGTVI-----VLTTPDAQRAMLAYQGTSS-TINY-DPCL---VNLISKTNIFIVEGY 286 (343)
Q Consensus 226 ---------~GVd~~~v~~~~~~Tg~~i-----Vlid~dGeRt~i~~~Ga~~-~l~~-~di~---~~~i~~adiv~isG~ 286 (343)
...+..+|- +-+.|..+ -++.|...|-++.+.-.+. .+.. +++. .+..+.+|.++++||
T Consensus 168 ~~~ea~~~~~~~~iH~I~--Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGl 245 (474)
T 3drw_A 168 PIQEAYREGDPLKINRIF--EFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGY 245 (474)
T ss_dssp EGGGCCCTTCCCCEEEEE--EECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCG
T ss_pred CchhhhccCCCCCcEEEE--EcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEecc
Confidence 112222221 11122221 2345566677777776665 5543 2222 233336899999999
Q ss_pred CCCCC-----ch-H---HHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEee
Q 019265 287 LFELP-----DT-I---RTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLE 341 (343)
Q Consensus 287 ~l~~p-----~s-~---~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~ 341 (343)
..-.. .. . +.+.+.++..+..+++|-|...+....+-....+..+++++|.+=+|
T Consensus 246 q~m~~~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmN 309 (474)
T 3drw_A 246 QGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGID 309 (474)
T ss_dssp GGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEE
T ss_pred ccccccccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccC
Confidence 64211 11 2 23345555566889999999987543344456677899999998665
No 54
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=96.20 E-value=0.0027 Score=58.96 Aligned_cols=61 Identities=8% Similarity=0.058 Sum_probs=42.8
Q ss_pred CceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCE-EEEECCCcc------hhhhcHHHHHH-hcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGAL-VAVTASDVT------CIERHYDDFWY-EYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~-V~fD~s~~~------~~~~~~e~l~e-lL~~vDIlf~~~ 342 (343)
.+++++++ +. . +.+.+..+++.+++.+++ ++|||+... +.+...+.+.+ +++++||+++|.
T Consensus 94 ~~~~v~~G-~l--~--~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~ 162 (288)
T 1jxh_A 94 RIDTTKIG-ML--A--ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNL 162 (288)
T ss_dssp CCSEEEEC-CC--C--SHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBH
T ss_pred CCCEEEEC-CC--C--CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCH
Confidence 36888774 32 1 367888999999999996 999998642 11112244554 899999999984
No 55
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=94.83 E-value=0.087 Score=52.79 Aligned_cols=151 Identities=8% Similarity=-0.010 Sum_probs=87.0
Q ss_pred ecCChHHHHHHHHHHhCCCCCCCCCCceEE--EEEcCCChHHHHHHHHHHhCCCCcceee----e--------CCCCceE
Q 019265 177 AAGGSLSNSLVALARLGGKPIGGPALNVAM--TGSVGSDPLGGFYRAKLRRANVAFCSEP----I--------KDGTTGT 242 (343)
Q Consensus 177 ~~GGsa~NvA~aLArLG~~~~~~~~~~v~l--ig~VG~D~~G~~I~~~L~~~GVd~~~v~----~--------~~~~Tg~ 242 (343)
+.||.|.-+|..||++|. ++.+ ++.+| +..++.|...+|..-.+. . .+.+.-.
T Consensus 117 ~mGGnAgimAn~la~lg~--------~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~i 183 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYR--------IPTIVHVPQNP-----KLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELI 183 (467)
T ss_dssp EEESHHHHHHHHHHHTSC--------CCEEECCSCCC-----HHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCE
T ss_pred ccCccHHHHHHHHHhcCC--------CEEEEcCCCCC-----HHHHHhcCCCCeeeeeccCCceecccchhhccCCCCcc
Confidence 999999999999999999 5544 44444 344555542333211000 0 0011111
Q ss_pred EEE-----------EECCCCCeEEEEecCCCCCCCCchh----hhhccCCceEEEEcCcCC-CC--C--chH-H---HHH
Q 019265 243 VIV-----------LTTPDAQRAMLAYQGTSSTINYDPC----LVNLISKTNIFIVEGYLF-EL--P--DTI-R---TIT 298 (343)
Q Consensus 243 ~iV-----------lid~dGeRt~i~~~Ga~~~l~~~di----~~~~i~~adiv~isG~~l-~~--p--~s~-~---~i~ 298 (343)
-+| ++.|...|-++.+.-.+..+...+. ..+...++|.++++||.. .. + ... + .+.
T Consensus 184 H~I~Ey~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~ 263 (467)
T 1gc5_A 184 HYIYEFPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVE 263 (467)
T ss_dssp EEEEEECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHH
T ss_pred eEEEEcCCCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHH
Confidence 222 2334556766666666656554332 223335699999999963 21 1 112 2 223
Q ss_pred HHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEee
Q 019265 299 KACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLE 341 (343)
Q Consensus 299 ~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~ 341 (343)
+.++.....+++|-|.+.+....+-....+ .+++++|.+=+|
T Consensus 264 ~~l~~l~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmN 305 (467)
T 1gc5_A 264 SHLNILNRYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLN 305 (467)
T ss_dssp HHHHHHHHTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEEC
T ss_pred HHHHhhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccC
Confidence 333333567899999998754334345566 999999998665
No 56
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=93.59 E-value=0.13 Score=51.50 Aligned_cols=151 Identities=11% Similarity=0.048 Sum_probs=85.4
Q ss_pred ecCChHHHHHHHHHHhCCCCCCCCCCceEE--EEEcCCChHHHHHHHHHHhCCCCcceee------------eCCCCceE
Q 019265 177 AAGGSLSNSLVALARLGGKPIGGPALNVAM--TGSVGSDPLGGFYRAKLRRANVAFCSEP------------IKDGTTGT 242 (343)
Q Consensus 177 ~~GGsa~NvA~aLArLG~~~~~~~~~~v~l--ig~VG~D~~G~~I~~~L~~~GVd~~~v~------------~~~~~Tg~ 242 (343)
+.||.|..+|..|+++|. ++.+ ++.+|. .+++.|...+|..-.+. ....+...
T Consensus 109 ~~GGnA~imAn~la~lg~--------~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~i 175 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYG--------VPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCI 175 (455)
T ss_dssp EEESHHHHHHHHHTTTTC--------CCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCE
T ss_pred ccCCcHHHHHHHHHHcCC--------CEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCc
Confidence 899999999999999999 6655 666654 34555542233320010 00123333
Q ss_pred EEEEE-----------CCCCCeEEEEecCCCCCCCCchhhh----hccCCceEEEEcCcCCCCCc----hHHHHHHHHHH
Q 019265 243 VIVLT-----------TPDAQRAMLAYQGTSSTINYDPCLV----NLISKTNIFIVEGYLFELPD----TIRTITKACEV 303 (343)
Q Consensus 243 ~iVli-----------d~dGeRt~i~~~Ga~~~l~~~di~~----~~i~~adiv~isG~~l~~p~----s~~~i~~ll~~ 303 (343)
.+|+= .|...|-++.+.-.+..+...+... +...++|.+.++||..-... ..+...+.++.
T Consensus 176 H~I~Ef~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~ 255 (455)
T 1ua4_A 176 HYIYEFPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEV 255 (455)
T ss_dssp EEEEEECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHH
Confidence 33332 2233455555554444444322222 23345999999999641111 12222222223
Q ss_pred HHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEee
Q 019265 304 AHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLE 341 (343)
Q Consensus 304 Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~ 341 (343)
.+..+++|-|++.+....+.....+ .+++++|.+=+|
T Consensus 256 L~~~~~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmN 292 (455)
T 1ua4_A 256 LNEREIPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLN 292 (455)
T ss_dssp HHHTTCCEEEECCCCCCHHHHHHHH-HHGGGCSEEEEC
T ss_pred hcCCCceEEEEeCCccCHHHHHHHH-hhhccCcccccC
Confidence 3667899999999854433335556 999999987555
No 57
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=92.89 E-value=0.21 Score=49.96 Aligned_cols=149 Identities=9% Similarity=0.037 Sum_probs=87.4
Q ss_pred ecCChHHHHHHHHHHhCCCCCCCCCCceEE--EEEcCCChHHHHHHHHHHhCCCC------------------------c
Q 019265 177 AAGGSLSNSLVALARLGGKPIGGPALNVAM--TGSVGSDPLGGFYRAKLRRANVA------------------------F 230 (343)
Q Consensus 177 ~~GGsa~NvA~aLArLG~~~~~~~~~~v~l--ig~VG~D~~G~~I~~~L~~~GVd------------------------~ 230 (343)
+.||.|.-+|..||++|. ++.+ ++.+|. ..++.|...+|. .
T Consensus 112 ~mGGnA~imAn~la~lg~--------~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~i 178 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYG--------IPVIAHVPQLSE-----LQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCI 178 (457)
T ss_dssp EEESHHHHHHHHHTTTSC--------CCEEECCSSCCH-----HHHHTSCSSSEEEEC------CEECGGGC----CCCE
T ss_pred ccCchHHHHHHHHHHcCC--------CEEEEcCCCCCH-----HHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcc
Confidence 999999999999999998 5544 444443 344444422222 1
Q ss_pred ceee-eCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchh----hhhccCCceEEEEcCcCCCCCch----HHHHHHHH
Q 019265 231 CSEP-IKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPC----LVNLISKTNIFIVEGYLFELPDT----IRTITKAC 301 (343)
Q Consensus 231 ~~v~-~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di----~~~~i~~adiv~isG~~l~~p~s----~~~i~~ll 301 (343)
..|- .+.+ ..+. -++.|...|-++.+.-.+..+...+. ..+...++|.++++||..-...+ .+...+.+
T Consensus 179 H~I~Ey~~G-~~~~-~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i 256 (457)
T 1l2l_A 179 HYIYEFPRN-FKVL-DFEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHL 256 (457)
T ss_dssp EECCEECTT-CEET-TEECSSCEEEEEEECSSGGGTCCCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHH
T ss_pred eEEEEcCCC-Ceec-ceecCCCCeEEEEcCCCCCCCcccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHH
Confidence 1111 1111 1111 23445566777777766666654332 22333569999999996421111 12222333
Q ss_pred HHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEee
Q 019265 302 EVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLE 341 (343)
Q Consensus 302 ~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~ 341 (343)
+..+..+++|-|.+.+....+-....+ .+++++|.+=+|
T Consensus 257 ~~L~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmN 295 (457)
T 1l2l_A 257 KILNDLGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLN 295 (457)
T ss_dssp HHHHHTTCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEEC
T ss_pred HHhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccC
Confidence 344678999999998754334345566 899999998665
No 58
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=92.69 E-value=0.18 Score=46.87 Aligned_cols=64 Identities=9% Similarity=0.074 Sum_probs=47.1
Q ss_pred CceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcc----h---hhhcHHHHHHhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVT----C---IERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~----~---~~~~~e~l~elL~~vDIlf~~~ 342 (343)
..+.+.+ |+.. .+...+.+.++++.+++.+++++|||.... + .+...+.++++++++||+.+|.
T Consensus 77 ~~~aik~-G~l~-s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~ 147 (291)
T 3mbh_A 77 QFDAIYT-GYLG-SPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNL 147 (291)
T ss_dssp CCSEEEE-CCCS-STTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBH
T ss_pred ccCEEEE-CCCC-CHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCH
Confidence 6788888 6642 334567788888888777899999998642 1 1334456789999999999984
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=90.72 E-value=0.19 Score=47.01 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=43.5
Q ss_pred CCceEEEEcCcCCCCCchHHHHHHHHHHHHhCC------CEEEEECCCcc----h-hhhcHHHHHHhcccCcEEEeec
Q 019265 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSG------ALVAVTASDVT----C-IERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G------~~V~fD~s~~~----~-~~~~~e~l~elL~~vDIlf~~~ 342 (343)
.+.|+|.+ ||.. .+...+.+.++++.+|+.+ .++++||.... + .+...+.++++++++||+.+|.
T Consensus 75 ~~~daV~t-G~l~-s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~ 150 (300)
T 3zs7_A 75 SNYRYILT-GYIN-NVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNY 150 (300)
T ss_dssp GGCSEEEE-CCCC-CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCH
T ss_pred ccCCEEEE-CCCC-CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCH
Confidence 46787655 7743 2223566777777777655 79999995421 2 2334567888999999999985
No 60
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=89.59 E-value=0.62 Score=41.64 Aligned_cols=61 Identities=11% Similarity=0.045 Sum_probs=41.4
Q ss_pred CceEEEEcCcCCCCCchHHHHHHHHHHHHhCC-CEEEEECCCcc------hhhhcHHHH-HHhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSG-ALVAVTASDVT------CIERHYDDF-WYEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G-~~V~fD~s~~~------~~~~~~e~l-~elL~~vDIlf~~~ 342 (343)
+.+.+++ |+ +. ..+.+..+++.+++++ ++++|||+... +.+...+.+ .++++++||+++|.
T Consensus 70 ~~~~v~~-G~-l~---~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~ 138 (258)
T 1ub0_A 70 PLHAAKT-GA-LG---DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNR 138 (258)
T ss_dssp CCSEEEE-CC-CC---SHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBH
T ss_pred CCCEEEE-CC-cC---CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCH
Confidence 4677777 44 22 3577888899999988 89999997531 111223345 46899999999984
No 61
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=89.31 E-value=0.44 Score=43.82 Aligned_cols=68 Identities=7% Similarity=0.051 Sum_probs=45.5
Q ss_pred hccCCceEEEE-cCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcc--cCcEEEeec
Q 019265 273 NLISKTNIFIV-EGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYY--MVLIVVLEF 342 (343)
Q Consensus 273 ~~i~~adiv~i-sG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~--~vDIlf~~~ 342 (343)
+.+..++++++ .|. + .+...+.+.++++.+++.|+++++||..........+...++++ ++||+.+|.
T Consensus 54 ~~~~~a~~lvi~~G~-~-~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~ 124 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT-L-SKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNA 124 (272)
T ss_dssp HHHHHSSEEEEECTT-C-CHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECH
T ss_pred HHHHhCCEEEEECCC-C-CHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCH
Confidence 44567888888 333 2 12234677888888999999999999754221111234456776 899999984
No 62
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=88.36 E-value=0.87 Score=41.01 Aligned_cols=61 Identities=11% Similarity=0.124 Sum_probs=43.3
Q ss_pred CceEEEEcCcCCCCCchHHHHHHHHHHHHhCCC-EEEEECCCcc--h----hhhcHHHHH-HhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGA-LVAVTASDVT--C----IERHYDDFW-YEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~-~V~fD~s~~~--~----~~~~~e~l~-elL~~vDIlf~~~ 342 (343)
+.+++++ |+ +. ..+.+..+++.+++.+. +++|||+... + .+...+.+. ++++++||+++|.
T Consensus 74 ~~d~v~~-G~-l~---~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~ 142 (271)
T 2i5b_A 74 GVDAMKT-GM-LP---TVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNL 142 (271)
T ss_dssp CCSEEEE-CC-CC---SHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBH
T ss_pred CCCEEEE-CC-CC---CHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCH
Confidence 6788888 44 21 25788888999999998 5999997532 1 111234565 7899999999984
No 63
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=87.70 E-value=0.45 Score=43.90 Aligned_cols=65 Identities=11% Similarity=0.055 Sum_probs=44.6
Q ss_pred CCceEEEEcCcCCCCCchHHHHHHHHHHHHhCC--CEEEEECCCc------chhhhcHHHHHH-hcccCcEEEeec
Q 019265 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSG--ALVAVTASDV------TCIERHYDDFWY-EYYMVLIVVLEF 342 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G--~~V~fD~s~~------~~~~~~~e~l~e-lL~~vDIlf~~~ 342 (343)
.+.+++ .+||.. .+...+.+.++++.+++.+ +++++||... .+.+...+.+++ +++++||+++|.
T Consensus 76 ~~~d~v-~~G~l~-~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~ 149 (289)
T 3pzs_A 76 KDCDAV-LSGYIG-SPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNL 149 (289)
T ss_dssp GGCCEE-EECCCS-SHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCH
T ss_pred cCCCEE-EECCCC-CHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCH
Confidence 478885 557642 2234678888888888766 8999998532 122334466664 789999999984
No 64
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=86.74 E-value=1.3 Score=40.84 Aligned_cols=61 Identities=7% Similarity=-0.005 Sum_probs=42.0
Q ss_pred CceEEEEcCcCCCCCchHHHHHHHHHHHHhC-CCEEEEECCCcc----h---hhhcHHHHHHhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRS-GALVAVTASDVT----C---IERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~-G~~V~fD~s~~~----~---~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+.+.+.+ |+.. +.+.+..+.+..++. +.+++|||.... + .+...+.++++++++||+.+|.
T Consensus 74 ~~daik~-G~l~----s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~ 142 (282)
T 3h74_A 74 HFDQALI-GYVG----SVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNT 142 (282)
T ss_dssp CCSEEEE-CCCC----SHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCH
T ss_pred ccCEEEE-CCCC----CHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCH
Confidence 6788888 5532 245555555555554 689999997542 1 2334566789999999999984
No 65
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=75.80 E-value=3.3 Score=41.96 Aligned_cols=63 Identities=13% Similarity=0.003 Sum_probs=42.0
Q ss_pred CceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCc------chhhhcHHHHH-HhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDV------TCIERHYDDFW-YEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~------~~~~~~~e~l~-elL~~vDIlf~~~ 342 (343)
..+.|.+ |+. .+...+.+.++++.+++.+.++++||... .+.+...+.++ ++++++||+.+|.
T Consensus 91 ~~daIki-G~l--s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~ 160 (550)
T 3rm5_A 91 KCNVIKT-GML--TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNI 160 (550)
T ss_dssp CCSEEEE-CSC--CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBH
T ss_pred CCCEEEE-CCC--CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCH
Confidence 6788888 443 33345666677776666689999999642 11122344555 7899999999984
No 66
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=72.45 E-value=3.9 Score=37.34 Aligned_cols=70 Identities=13% Similarity=0.052 Sum_probs=42.7
Q ss_pred hhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcc-cCcEEEeec
Q 019265 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYY-MVLIVVLEF 342 (343)
Q Consensus 272 ~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~-~vDIlf~~~ 342 (343)
.+.++.++.+++.--.+ .+...+.+..+++.+++.++++++||..........+...++++ ..+|+-+|.
T Consensus 51 ~~~~~~~dalvi~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~ 121 (265)
T 1v8a_A 51 EEMIRLADAVVINIGTL-DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNF 121 (265)
T ss_dssp HHHHHHCSEEEEECTTC-CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEH
T ss_pred HHHHHHCCEEEEEECCC-CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCH
Confidence 34556789999852211 11112456677888888999999999864322212233344544 389998884
No 67
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=67.24 E-value=12 Score=34.59 Aligned_cols=82 Identities=9% Similarity=0.011 Sum_probs=48.3
Q ss_pred CCCCCCCCc-hhhhhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhc-ccCcE
Q 019265 260 GTSSTINYD-PCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEY-YMVLI 337 (343)
Q Consensus 260 Ga~~~l~~~-di~~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL-~~vDI 337 (343)
|++..+... +...+.++.++.+++.--.+ .+...+.+..+++.+++.+++++|||..........+...+++ ...+|
T Consensus 40 GasP~M~~~~~e~~e~~~~a~alvIn~G~l-~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~V 118 (273)
T 3dzv_A 40 DAKPIMADDPREFPQMFQQTSALVLNLGHL-SQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTV 118 (273)
T ss_dssp TCEEECCCCGGGHHHHHTTCSEEEEECCSC-CHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSE
T ss_pred CCchhhcCCHHHHHHHHHHCCeEEEecCCC-ChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcE
Confidence 555444332 33455677889999852222 1112467778888899999999999975322211122333333 35678
Q ss_pred EEeec
Q 019265 338 VVLEF 342 (343)
Q Consensus 338 lf~~~ 342 (343)
+-+|.
T Consensus 119 ItpN~ 123 (273)
T 3dzv_A 119 VKGNL 123 (273)
T ss_dssp EEEEH
T ss_pred ECCCH
Confidence 77763
No 68
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=63.95 E-value=17 Score=36.86 Aligned_cols=80 Identities=6% Similarity=-0.082 Sum_probs=52.5
Q ss_pred CCCCCCCCc-hhhhhccCC-ceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcc--cC
Q 019265 260 GTSSTINYD-PCLVNLISK-TNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYY--MV 335 (343)
Q Consensus 260 Ga~~~l~~~-di~~~~i~~-adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~--~v 335 (343)
|++..+... +...++.+. ++.+++.--.+ . ..+.+..+++.+++.+++++|||..........+...++++ ..
T Consensus 287 GasPiM~~~~~E~~e~~~~~~~alvin~G~l--~-~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~ 363 (540)
T 3nl6_A 287 GSSPIMSEIQSEVNDLAAIPHATLLLNTGSV--A-PPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQF 363 (540)
T ss_dssp TSEEECCCCHHHHHHHTTSTTCEEEEESSCS--C-CHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCC
T ss_pred CCChhhcCCHHHHHHHHhccCCeEEEeCCCC--C-HHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCC
Confidence 555444432 234456677 89999863222 2 27888888999999999999999764322222345567776 67
Q ss_pred cEEEeec
Q 019265 336 LIVVLEF 342 (343)
Q Consensus 336 DIlf~~~ 342 (343)
+|+-+|.
T Consensus 364 ~vItpN~ 370 (540)
T 3nl6_A 364 SCIKGNS 370 (540)
T ss_dssp SEEEECH
T ss_pred eEECCCH
Confidence 7887763
No 69
>3ost_A Serine/threonine-protein kinase KCC4; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.69A {Saccharomyces cerevisiae} PDB: 3osm_A
Probab=50.80 E-value=4.6 Score=33.27 Aligned_cols=21 Identities=43% Similarity=0.841 Sum_probs=10.5
Q ss_pred ccCCccchhhhhhhhhcccCc
Q 019265 24 HHHPHRTKLQALVFRKFSLGK 44 (343)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~ 44 (343)
|||.|...-....|||||-+.
T Consensus 3 ~~~~~~~~~~~~f~rkfs~~~ 23 (128)
T 3ost_A 3 HHHHHKKPPNSVLLKKFSKGK 23 (128)
T ss_dssp ------CCCHHHHGGGSCSSE
T ss_pred ccccCCCCCchhhhhhhcCCC
Confidence 555566666677788888544
No 70
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=41.59 E-value=67 Score=30.64 Aligned_cols=59 Identities=7% Similarity=0.026 Sum_probs=34.3
Q ss_pred CceEEEEcCcCCCCC-chHHHHHHHHHHHHh--CCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFELP-DTIRTITKACEVAHR--SGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~p-~s~~~i~~ll~~Ak~--~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+.++|++..-. .| .....+.++.+.|++ +|+.+++|-....... .. .+--.+|+++.++
T Consensus 167 ~tklV~~e~~~--NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~-~~----p~~~g~Div~~S~ 228 (415)
T 2fq6_A 167 NTKIVFLESPG--SITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL-FK----ALDFGIDVSIQAA 228 (415)
T ss_dssp TEEEEEEESSC--TTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS-SC----GGGGTCSEEEEET
T ss_pred CCcEEEEECCC--CCCCEeecHHHHHHHHHhhcCCCEEEEECCCccccc-CC----ccccCCeEEEEeC
Confidence 56788876432 11 111236788888999 9999999986431110 00 1112478887654
No 71
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=40.59 E-value=75 Score=26.14 Aligned_cols=45 Identities=7% Similarity=0.021 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 294 IRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 294 ~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
++.+.++++.+++.|..+.+..+.. . ..+.+..+++++|.+.+++
T Consensus 18 ~~~~~~l~~~~~~~g~~~~l~TNG~-l---~~~~~~~l~~~~d~v~isl 62 (182)
T 3can_A 18 PEFLIDILKRCGQQGIHRAVDTTLL-A---RKETVDEVMRNCELLLIDL 62 (182)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTC-C---CHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHHHCCCcEEEECCCC-C---CHHHHHHHHhhCCEEEEEC
Confidence 3445677888888888888877764 2 1244555666677766553
No 72
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=38.95 E-value=65 Score=31.01 Aligned_cols=40 Identities=18% Similarity=0.279 Sum_probs=26.2
Q ss_pred CCceEEEEcCcCCCCC-chHHHHHHHHHHHHhCCCEEEEECCC
Q 019265 276 SKTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASD 317 (343)
Q Consensus 276 ~~adiv~isG~~l~~p-~s~~~i~~ll~~Ak~~G~~V~fD~s~ 317 (343)
.+.++|+++... .| .....+.++.+.|+++|+.+++|-..
T Consensus 166 ~~t~~v~~e~p~--NptG~~~dl~~i~~la~~~g~~livD~a~ 206 (430)
T 3ri6_A 166 ETTKLLFLETIS--NPQLQVADLEALSKVVHAKGIPLVVDTTM 206 (430)
T ss_dssp TTEEEEEEESSC--TTTCCCCCHHHHHHHHHTTTCCEEEECTT
T ss_pred CCCeEEEEECCC--CCCCeecCHHHHHHHHHHcCCEEEEECCC
Confidence 357788876432 11 01123567888899999999999654
No 73
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=36.19 E-value=2.4e+02 Score=25.25 Aligned_cols=107 Identities=12% Similarity=0.017 Sum_probs=58.1
Q ss_pred ceEEecCChHHHHHHHHHHhCCCCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCC
Q 019265 173 SYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQ 252 (343)
Q Consensus 173 ~~~~~~GGsa~NvA~aLArLG~~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGe 252 (343)
......||..++.+...+.+.- .+..++..-+-.. +...++..|.....+.....
T Consensus 83 ~i~~t~g~~~a~~~~~~~~~~~-------gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~-------------- 137 (377)
T 3fdb_A 83 WIFPIPDVVRGLYIAIDHFTPA-------QSKVIVPTPAYPP----FFHLLSATQREGIFIDATGG-------------- 137 (377)
T ss_dssp GEEEESCHHHHHHHHHHHHSCT-------TCCEEEEESCCTH----HHHHHHHHTCCEEEEECTTS--------------
T ss_pred HEEEeCChHHHHHHHHHHhcCC-------CCEEEEcCCCcHh----HHHHHHHcCCEEEEccCCCC--------------
Confidence 4556778877765555444321 1344554444332 23445555655433322110
Q ss_pred eEEEEecCCCCCCCCchhhhhccCCceEEEEcCcCCCCC----chHHHHHHHHHHHHhCCCEEEEECCCc
Q 019265 253 RAMLAYQGTSSTINYDPCLVNLISKTNIFIVEGYLFELP----DTIRTITKACEVAHRSGALVAVTASDV 318 (343)
Q Consensus 253 Rt~i~~~Ga~~~l~~~di~~~~i~~adiv~isG~~l~~p----~s~~~i~~ll~~Ak~~G~~V~fD~s~~ 318 (343)
++++++...+-++.+++++..-. .| -+.+.+.++++.|+++|+.+++|-...
T Consensus 138 ------------~d~~~l~~~l~~~~~~v~i~~p~--nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~ 193 (377)
T 3fdb_A 138 ------------INLHDVEKGFQAGARSILLCNPY--NPLGMVFAPEWLNELCDLAHRYDARVLVDEIHA 193 (377)
T ss_dssp ------------CCHHHHHHHHHTTCCEEEEESSB--TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTG
T ss_pred ------------CCHHHHHHHhccCCCEEEEeCCC--CCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 33444432222346667764321 11 125678999999999999999997653
No 74
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=35.99 E-value=61 Score=30.34 Aligned_cols=40 Identities=25% Similarity=0.199 Sum_probs=26.1
Q ss_pred CCceEEEEcCcCCCCC-chHHHHHHHHHHHHhCCCEEEEECCC
Q 019265 276 SKTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASD 317 (343)
Q Consensus 276 ~~adiv~isG~~l~~p-~s~~~i~~ll~~Ak~~G~~V~fD~s~ 317 (343)
.+.++|++..-. .| .....+.++.+.|+++|+.+++|-..
T Consensus 150 ~~~~~v~~~~~~--nptG~~~~l~~i~~la~~~g~~li~D~~~ 190 (392)
T 3qhx_A 150 PTTRLIWVETPT--NPLLSIADIAGIAQLGADSSAKVLVDNTF 190 (392)
T ss_dssp TTEEEEEEESSC--TTTCCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred CCCeEEEEECCC--CCCcEEecHHHHHHHHHHcCCEEEEECCC
Confidence 356777765321 11 11123677888889999999999764
No 75
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=35.24 E-value=82 Score=29.91 Aligned_cols=40 Identities=25% Similarity=0.265 Sum_probs=26.8
Q ss_pred CCceEEEEcCcCCCCC-chHHHHHHHHHHHHhCCCEEEEECCC
Q 019265 276 SKTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASD 317 (343)
Q Consensus 276 ~~adiv~isG~~l~~p-~s~~~i~~ll~~Ak~~G~~V~fD~s~ 317 (343)
.+.++|++.... .| .....+.++.+.|+++|+.+++|-..
T Consensus 165 ~~t~~v~le~p~--NptG~~~~l~~i~~la~~~g~~livDe~~ 205 (414)
T 3ndn_A 165 VPTQAVFFETPS--NPMQSLVDIAAVTELAHAAGAKVVLDNVF 205 (414)
T ss_dssp SCCSEEEEESSC--TTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCeEEEEECCC--CCCCccccHHHHHHHHHHcCCEEEEECCC
Confidence 357788875432 11 11223667888899999999999764
No 76
>1uvq_C Orexin; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens}
Probab=34.10 E-value=15 Score=22.44 Aligned_cols=18 Identities=50% Similarity=0.850 Sum_probs=14.5
Q ss_pred CCcceeeeeccCCCCCCC
Q 019265 68 SSSLSVCWASNGGGGDLG 85 (343)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~ 85 (343)
-+|.-|.||.-+|||.|-
T Consensus 8 ~pSTKVsWAaVtgggslv 25 (33)
T 1uvq_C 8 LPSTKVSWAAVGGGGSLV 25 (33)
T ss_pred CCccccceEEecCCceee
Confidence 345678999999999874
No 77
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=33.36 E-value=8.9 Score=36.47 Aligned_cols=15 Identities=27% Similarity=0.328 Sum_probs=0.0
Q ss_pred CCCCCCCCCCccccc
Q 019265 79 GGGGDLGRDNYEEDD 93 (343)
Q Consensus 79 ~~~~~~~~~~~~~~~ 93 (343)
-=.+.++-|+++|||
T Consensus 286 ~~~~~~~~~~~~~~~ 300 (335)
T 4fp9_B 286 SDDKRASLDEDEDDD 300 (335)
T ss_dssp ---------------
T ss_pred hhhhhhccccccccc
Confidence 344556655554444
No 78
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=32.04 E-value=2e+02 Score=27.10 Aligned_cols=25 Identities=0% Similarity=-0.088 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCc
Q 019265 294 IRTITKACEVAHRSGALVAVTASDV 318 (343)
Q Consensus 294 ~~~i~~ll~~Ak~~G~~V~fD~s~~ 318 (343)
.+.+.++++.|+++|+.+++|-...
T Consensus 221 ~~~l~~i~~l~~~~~~~li~Deay~ 245 (448)
T 3meb_A 221 EAQWKELLPIMKEKKHIAFFDSAYQ 245 (448)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEESCT
T ss_pred HHHHHHHHHHHHHCCCEEEEecccc
Confidence 6778889999999999999997643
No 79
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=31.35 E-value=86 Score=27.77 Aligned_cols=58 Identities=7% Similarity=-0.030 Sum_probs=35.8
Q ss_pred hhccCCceEEEEcCcCCCCCchHHHHHHHHH---HHHhCCCEEEEECCCcchhhhcHHHHHHhcc--cCcEEE
Q 019265 272 VNLISKTNIFIVEGYLFELPDTIRTITKACE---VAHRSGALVAVTASDVTCIERHYDDFWYEYY--MVLIVV 339 (343)
Q Consensus 272 ~~~i~~adiv~isG~~l~~p~s~~~i~~ll~---~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~--~vDIlf 339 (343)
....+ ++++.+-.-.. .+.+.+.++ .+|+.|+++.+.+++... .+.++++++ .+|++.
T Consensus 81 ~~~~~-Ad~itvH~ea~-----~~~~~~~i~~~~~i~~~G~k~gvalnp~tp----~~~~~~~l~~g~~D~Vl 143 (227)
T 1tqx_A 81 PLLKT-SNQLTFHFEAL-----NEDTERCIQLAKEIRDNNLWCGISIKPKTD----VQKLVPILDTNLINTVL 143 (227)
T ss_dssp GGCTT-SSEEEEEGGGG-----TTCHHHHHHHHHHHHTTTCEEEEEECTTSC----GGGGHHHHTTTCCSEEE
T ss_pred HHHHh-CCEEEEeecCC-----ccCHHHHHHHHHHHHHcCCeEEEEeCCCCc----HHHHHHHhhcCCcCEEE
Confidence 34444 88886653321 112345555 999999999988865322 234566777 788874
No 80
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=30.97 E-value=1.7e+02 Score=27.35 Aligned_cols=41 Identities=27% Similarity=0.375 Sum_probs=27.3
Q ss_pred CCceEEEEcCcCCCCCc-hHHHHHHHHHHHHh-CCCEEEEECCCc
Q 019265 276 SKTNIFIVEGYLFELPD-TIRTITKACEVAHR-SGALVAVTASDV 318 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~-s~~~i~~ll~~Ak~-~G~~V~fD~s~~ 318 (343)
.+.++|++..-. .|. ....+.++.+.|++ +|+.+++|-...
T Consensus 146 ~~t~~v~l~~p~--NptG~v~~l~~i~~la~~~~~~~li~De~~~ 188 (404)
T 1e5e_A 146 PNTKIVYFETPA--NPTLKIIDMERVCKDAHSQEGVLVIADNTFC 188 (404)
T ss_dssp TTEEEEEEESSC--TTTCCCCCHHHHHHHHHTSTTCEEEEECTTT
T ss_pred CCCcEEEEECCC--CCCCcccCHHHHHHHHHhhcCCEEEEECCCc
Confidence 357888886321 111 11136788888999 999999998754
No 81
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=30.27 E-value=2.1e+02 Score=26.89 Aligned_cols=90 Identities=12% Similarity=0.135 Sum_probs=48.6
Q ss_pred EEEcC-CChHHHHHHHHHHhCCCCcceee--eCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCCceEEEE
Q 019265 207 TGSVG-SDPLGGFYRAKLRRANVAFCSEP--IKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIV 283 (343)
Q Consensus 207 ig~VG-~D~~G~~I~~~L~~~GVd~~~v~--~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~adiv~i 283 (343)
++.+| +-..|..+++.|.++......+. ......|..+.+ . | ..+. .++.....+.++|++++
T Consensus 4 VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~-~--~-~~~~----------~~~~~~~~~~~~Dvvf~ 69 (344)
T 3tz6_A 4 IGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAF-R--G-QEIE----------VEDAETADPSGLDIALF 69 (344)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEE-T--T-EEEE----------EEETTTSCCTTCSEEEE
T ss_pred EEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceee-c--C-CceE----------EEeCCHHHhccCCEEEE
Confidence 34455 34579999999998753321121 122233333332 1 1 1111 11111233568899988
Q ss_pred cCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCc
Q 019265 284 EGYLFELPDTIRTITKACEVAHRSGALVAVTASDV 318 (343)
Q Consensus 284 sG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~ 318 (343)
+ .| .....+....+.+.|+ .++|.+..
T Consensus 70 a-----~~--~~~s~~~a~~~~~~G~-~vID~Sa~ 96 (344)
T 3tz6_A 70 S-----AG--SAMSKVQAPRFAAAGV-TVIDNSSA 96 (344)
T ss_dssp C-----SC--HHHHHHHHHHHHHTTC-EEEECSST
T ss_pred C-----CC--hHHHHHHHHHHHhCCC-EEEECCCc
Confidence 6 23 4566777777778888 46777753
No 82
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=30.26 E-value=54 Score=29.97 Aligned_cols=69 Identities=12% Similarity=0.052 Sum_probs=40.3
Q ss_pred hhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhc-ccCcEEEee
Q 019265 272 VNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEY-YMVLIVVLE 341 (343)
Q Consensus 272 ~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL-~~vDIlf~~ 341 (343)
.++.+.++.+++.--.+. +...+.+....+.|.+.|++++|||....-...-.+..++++ .+.+|+-.|
T Consensus 51 ~e~~~~a~al~iNiGtl~-~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN 120 (265)
T 3hpd_A 51 EEMIRLADAVVINIGTLD-SGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGN 120 (265)
T ss_dssp HHHHHHCSEEEEECTTCC-HHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHCCeEEEECCCCC-hHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCC
Confidence 345556777888522221 123466777788899999999999976432221123333433 245666655
No 83
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=30.20 E-value=11 Score=37.08 Aligned_cols=8 Identities=25% Similarity=0.679 Sum_probs=4.9
Q ss_pred eEEEccCC
Q 019265 59 FLWVSPSS 66 (343)
Q Consensus 59 ~~~~~~~~ 66 (343)
|-|.+|..
T Consensus 313 FnfFspp~ 320 (417)
T 2ayu_A 313 FNFFDPPK 320 (417)
T ss_dssp GGGGSCSC
T ss_pred eeecCCCC
Confidence 56777654
No 84
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=28.80 E-value=1.9e+02 Score=26.64 Aligned_cols=41 Identities=24% Similarity=0.369 Sum_probs=27.2
Q ss_pred CCceEEEEcCcCCCCC-chHHHHHHHHHHHHhCCCEEEEECCCc
Q 019265 276 SKTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASDV 318 (343)
Q Consensus 276 ~~adiv~isG~~l~~p-~s~~~i~~ll~~Ak~~G~~V~fD~s~~ 318 (343)
.+.++|++..-. .| .....+.++.+.|+++|+.+++|-...
T Consensus 148 ~~~~~v~~~~~~--nptG~~~~l~~i~~l~~~~~~~li~De~~~ 189 (398)
T 2rfv_A 148 PETKVVYIETPA--NPTLSLVDIETVAGIAHQQGALLVVDNTFM 189 (398)
T ss_dssp TTEEEEEEESSB--TTTTBCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCCeEEEEECCC--CCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 356788875422 11 111136788888999999999998754
No 85
>1vrm_A Hypothetical protein TM1553; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 1.58A {Thermotoga maritima} SCOP: d.96.2.1
Probab=28.39 E-value=9.6 Score=36.05 Aligned_cols=16 Identities=50% Similarity=0.636 Sum_probs=2.7
Q ss_pred CcccCCccchhhhhhh
Q 019265 22 LYHHHPHRTKLQALVF 37 (343)
Q Consensus 22 ~~~~~~~~~~~~~~~~ 37 (343)
..|||.||||-+....
T Consensus 6 ~~~~~~~~~~~~~~~~ 21 (325)
T 1vrm_A 6 IHHHHHHRTKDQYYEL 21 (325)
T ss_dssp -----------CCEEE
T ss_pred cccccccccCCccEEE
Confidence 4688999999876543
No 86
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=28.11 E-value=3.5e+02 Score=25.11 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=58.0
Q ss_pred eEEecCChHHHHHHHHHHhCCCCCCCCCCceEEE------------------EEcCCChHHHHHHHHHHhCCCCcceeee
Q 019265 174 YKAAAGGSLSNSLVALARLGGKPIGGPALNVAMT------------------GSVGSDPLGGFYRAKLRRANVAFCSEPI 235 (343)
Q Consensus 174 ~~~~~GGsa~NvA~aLArLG~~~~~~~~~~v~li------------------g~VG~D~~G~~I~~~L~~~GVd~~~v~~ 235 (343)
.-.-+||.+..+|.+|++.|.. +..++ .-||. .-.+.+.+.|++.+-.+..
T Consensus 40 livG~GGlG~~ia~~La~~Gvg-------~itlvD~d~V~~sNL~rq~~~~~~diG~-~Ka~~~~~~l~~lnp~v~v--- 108 (346)
T 1y8q_A 40 LLVGLKGLGAEIAKNLILAGVK-------GLTMLDHEQVTPEDPGAQFLIRTGSVGR-NRAEASLERAQNLNPMVDV--- 108 (346)
T ss_dssp EEECCSHHHHHHHHHHHHHTCS-------EEEEECCCBCCSSCGGGCTTSCSSCTTS-BHHHHHHHHHHHTCTTSEE---
T ss_pred EEECCCHHHHHHHHHHHHcCCC-------EEEEEECCCcchhhCCCCCccccccCcC-CHHHHHHHHHHhHCCCeEE---
Confidence 3456899999999999999983 45555 22333 2345555666654322211
Q ss_pred CCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEE
Q 019265 236 KDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAV 313 (343)
Q Consensus 236 ~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~f 313 (343)
..... .++. ...+.+++.|+|+.+. ++.+....+-+.|++++++++.
T Consensus 109 ---------~~~~~--------------~~~~--~~~~~~~~~dvVv~~~------d~~~~r~~ln~~~~~~~ip~i~ 155 (346)
T 1y8q_A 109 ---------KVDTE--------------DIEK--KPESFFTQFDAVCLTC------CSRDVIVKVDQICHKNSIKFFT 155 (346)
T ss_dssp ---------EEECS--------------CGGG--CCHHHHTTCSEEEEES------CCHHHHHHHHHHHHHTTCEEEE
T ss_pred ---------EEEec--------------ccCc--chHHHhcCCCEEEEcC------CCHHHHHHHHHHHHHcCCCEEE
Confidence 11110 0111 1234567889988762 1356667788888888887764
No 87
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=26.93 E-value=2.4e+02 Score=22.46 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=18.4
Q ss_pred ceEEEEEcCC-ChHHHHHHHHHHhCCCC
Q 019265 203 NVAMTGSVGS-DPLGGFYRAKLRRANVA 229 (343)
Q Consensus 203 ~v~lig~VG~-D~~G~~I~~~L~~~GVd 229 (343)
++.++|.-.+ ...|..+.+.|.+.|..
T Consensus 16 ~IavIGaS~~~g~~G~~~~~~L~~~G~~ 43 (138)
T 1y81_A 16 KIALVGASKNPAKYGNIILKDLLSKGFE 43 (138)
T ss_dssp EEEEETCCSCTTSHHHHHHHHHHHTTCE
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHCCCE
Confidence 4444443322 67899999999988874
No 88
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=26.42 E-value=58 Score=28.94 Aligned_cols=54 Identities=7% Similarity=-0.013 Sum_probs=37.1
Q ss_pred CceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEE
Q 019265 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVV 339 (343)
Q Consensus 277 ~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf 339 (343)
+++++.+-.-.+ . ..+.++++.+|++|+++.+.+++... .+.++++++.+|++.
T Consensus 80 GAd~itvh~Ea~--~---~~~~~~i~~i~~~G~k~gv~lnp~tp----~~~~~~~l~~~D~Vl 133 (231)
T 3ctl_A 80 GADFITLHPETI--N---GQAFRLIDEIRRHDMKVGLILNPETP----VEAMKYYIHKADKIT 133 (231)
T ss_dssp TCSEEEECGGGC--T---TTHHHHHHHHHHTTCEEEEEECTTCC----GGGGTTTGGGCSEEE
T ss_pred CCCEEEECcccC--C---ccHHHHHHHHHHcCCeEEEEEECCCc----HHHHHHHHhcCCEEE
Confidence 789998864321 1 13578899999999998888765322 234566778899874
No 89
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=26.32 E-value=1.3e+02 Score=28.36 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=26.6
Q ss_pred CCceEEEEcCcCCCCCc-hHHHHHHHHHHHHhCCCEEEEECCC
Q 019265 276 SKTNIFIVEGYLFELPD-TIRTITKACEVAHRSGALVAVTASD 317 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~-s~~~i~~ll~~Ak~~G~~V~fD~s~ 317 (343)
.+.++|++.... .|. ....+.++.+.|+++|+.+++|-..
T Consensus 151 ~~~~~v~~e~~~--np~G~~~~l~~i~~la~~~g~~livDe~~ 191 (400)
T 3nmy_A 151 ADTKMVWIETPT--NPMLKLVDIAAIAVIARKHGLLTVVDNTF 191 (400)
T ss_dssp TTEEEEEEESSC--TTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCEEEEECCC--CCCCeeecHHHHHHHHHHcCCEEEEECCC
Confidence 356788876432 110 1113678888899999999999764
No 90
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=25.25 E-value=2e+02 Score=26.24 Aligned_cols=50 Identities=12% Similarity=0.125 Sum_probs=29.5
Q ss_pred CCchhhhhccCCceEEEEcCcCCCCC-chHHHHHHHHHHHHhCCCEEEEECCC
Q 019265 266 NYDPCLVNLISKTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASD 317 (343)
Q Consensus 266 ~~~di~~~~i~~adiv~isG~~l~~p-~s~~~i~~ll~~Ak~~G~~V~fD~s~ 317 (343)
+++++...+-++.+++++.... .| .....+.++.+.|+++|+.+++|-..
T Consensus 152 d~~~l~~~i~~~~~~v~~~~~~--nptG~~~~l~~i~~l~~~~~~~li~Dea~ 202 (423)
T 3lvm_A 152 DLKELEAAMRDDTILVSIMHVN--NEIGVVQDIAAIGEMCRARGIIYHVDATQ 202 (423)
T ss_dssp CHHHHHHHCCTTEEEEECCSBC--TTTCBBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred CHHHHHHhcCCCcEEEEEeCCC--CCCccccCHHHHHHHHHHcCCEEEEEhhh
Confidence 3444433333456777776432 11 11112566888888999999999764
No 91
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=24.54 E-value=1.7e+02 Score=26.95 Aligned_cols=59 Identities=20% Similarity=0.121 Sum_probs=34.2
Q ss_pred CceEEEEcCcCCCCC-chHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 277 KTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 277 ~adiv~isG~~l~~p-~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+.++|++..-. .| .....+.++.+.|+++|+.+++|-........ ..+-..+|+++.++
T Consensus 150 ~~~~v~~~~~~--nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~d~~~~S~ 209 (398)
T 1gc0_A 150 ATRVIYFESPA--NPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQ-----RPLELGADLVVHSA 209 (398)
T ss_dssp TEEEEEEESSC--TTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHC-----CGGGGTCSEEEEET
T ss_pred CCeEEEEECCC--CCCcccccHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCceEEEECC
Confidence 56778775321 11 11123678888899999999999875321100 01112478877664
No 92
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=24.08 E-value=2.9e+02 Score=26.15 Aligned_cols=90 Identities=13% Similarity=0.179 Sum_probs=49.1
Q ss_pred EEEcC-CChHHHHHHHHHHhCCCCcceee--eCCCCceEEEEEECCCCCeEEEEecCCCCCCCCchhhhhccCCceEEEE
Q 019265 207 TGSVG-SDPLGGFYRAKLRRANVAFCSEP--IKDGTTGTVIVLTTPDAQRAMLAYQGTSSTINYDPCLVNLISKTNIFIV 283 (343)
Q Consensus 207 ig~VG-~D~~G~~I~~~L~~~GVd~~~v~--~~~~~Tg~~iVlid~dGeRt~i~~~Ga~~~l~~~di~~~~i~~adiv~i 283 (343)
++.+| +...|..+.+.|.+.+.....+. ......|..+.+ .|. .+. .+++....+.++|++++
T Consensus 5 VaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~---~~~-~~~----------~~~~~~~~~~~~Dvvf~ 70 (366)
T 3pwk_A 5 VAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF---KDQ-DIT----------IEETTETAFEGVDIALF 70 (366)
T ss_dssp EEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEE---TTE-EEE----------EEECCTTTTTTCSEEEE
T ss_pred EEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCccee---cCC-Cce----------EeeCCHHHhcCCCEEEE
Confidence 34455 44689999999998754332222 122223333222 111 111 11111223568899998
Q ss_pred cCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCc
Q 019265 284 EGYLFELPDTIRTITKACEVAHRSGALVAVTASDV 318 (343)
Q Consensus 284 sG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~ 318 (343)
+. | .....+.+..+.+.|++ ++|++..
T Consensus 71 a~-----~--~~~s~~~a~~~~~~G~~-vIDlSa~ 97 (366)
T 3pwk_A 71 SA-----G--SSTSAKYAPYAVKAGVV-VVDNTSY 97 (366)
T ss_dssp CS-----C--HHHHHHHHHHHHHTTCE-EEECSST
T ss_pred CC-----C--hHhHHHHHHHHHHCCCE-EEEcCCc
Confidence 62 3 45667777777888985 6777763
No 93
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=23.58 E-value=2.4e+02 Score=26.43 Aligned_cols=41 Identities=20% Similarity=0.147 Sum_probs=26.9
Q ss_pred CCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCC
Q 019265 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASD 317 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~ 317 (343)
.+.++|++....... .....+.++.+.|+++|+.+++|-..
T Consensus 143 ~~~~~v~~~~~~n~~-G~~~~l~~i~~~a~~~g~~livD~~~ 183 (421)
T 2ctz_A 143 EKTRAWWVESIGNPA-LNIPDLEALAQAAREKGVALIVDNTF 183 (421)
T ss_dssp TTEEEEEEESSCTTT-CCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred cCCeEEEEECCCCCC-CcccCHHHHHHHHHHcCCEEEEECCc
Confidence 367788886542100 01112678888899999999999865
No 94
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=23.22 E-value=4.1e+02 Score=23.87 Aligned_cols=40 Identities=15% Similarity=0.054 Sum_probs=28.5
Q ss_pred CceEEEEcCcCCCCCc----hHHHHHHHHHHHHhCCCEEEEECCCc
Q 019265 277 KTNIFIVEGYLFELPD----TIRTITKACEVAHRSGALVAVTASDV 318 (343)
Q Consensus 277 ~adiv~isG~~l~~p~----s~~~i~~ll~~Ak~~G~~V~fD~s~~ 318 (343)
+.++|++..- ..|. +.+.+.++++.|+++|+.+++|-...
T Consensus 161 ~~~~v~i~~p--~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~ 204 (391)
T 3h14_A 161 DLAGLMVASP--ANPTGTMLDHAAMGALIEAAQAQGASFISDEIYH 204 (391)
T ss_dssp CCSEEEEESS--CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCeEEEECCC--CCCCCccCCHHHHHHHHHHHHHcCCEEEEECcch
Confidence 5677777422 1111 26678999999999999999997643
No 95
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=23.17 E-value=3.2e+02 Score=24.62 Aligned_cols=71 Identities=18% Similarity=0.075 Sum_probs=38.5
Q ss_pred CCchhhhhccCCceEEEEcCcCCCCC-chHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 266 NYDPCLVNLISKTNIFIVEGYLFELP-DTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 266 ~~~di~~~~i~~adiv~isG~~l~~p-~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
+++++...+-.+.++|+++... .| .....+.++.+.|+++|+.+++|-......... .+.++ ..|+++.++
T Consensus 158 d~~~l~~~l~~~~~~v~~~~~~--nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~~~--~~di~~~s~ 229 (420)
T 1t3i_A 158 DLEHFKTLLSEKTKLVTVVHIS--NTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPL--DVQLI--DCDWLVASG 229 (420)
T ss_dssp CHHHHHHHCCTTEEEEEEESBC--TTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC--CHHHH--TCSEEEEEG
T ss_pred CHHHHHHhhCCCceEEEEeCCc--ccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccC--chhhc--CCCEEEEeh
Confidence 3444433222356788876432 11 111126778888999999999998653211110 11221 378877764
No 96
>3ach_A Beta-1,4-endoglucanase; beta-jellyroll, cellulose-binding domain, hydrolase; HET: BGC; 1.40A {Clostridium josui} PDB: 3acf_A* 3acg_A* 3aci_A*
Probab=22.92 E-value=46 Score=28.80 Aligned_cols=51 Identities=29% Similarity=0.487 Sum_probs=35.3
Q ss_pred cccCCccchhhhhhhhhcccCcceeccccccccccceEEEccCCCCCcceee
Q 019265 23 YHHHPHRTKLQALVFRKFSLGKERVRGGFMGKKGGGFLWVSPSSSSSSLSVC 74 (343)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (343)
.|||-||.-..+-|- .-.+|+.-.-.-|--..--|+-|-++|.--++|.+-
T Consensus 5 ~~~~~~~~~~e~pv~-hap~G~~tLPS~FED~TRQGWdWd~~SGVk~aLTIe 55 (203)
T 3ach_A 5 HHHHHHRAVVEAPVE-HAPIGKATLPSTFEDSTRQGWAWDATSGVQSALTIK 55 (203)
T ss_dssp ------CCCCCSCCC-CCCCCCCCSSBCCTTSSCTTEEECTTCSCCSCCEEE
T ss_pred cccccceeecccccc-ccCCCCccCCCcccccccccccccCCCCccceeEEe
Confidence 477778877665554 456788888888888888899999999888888764
No 97
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=22.81 E-value=2.6e+02 Score=24.81 Aligned_cols=77 Identities=12% Similarity=0.016 Sum_probs=42.6
Q ss_pred CCCchhhhhccCCceEEEEcCcC--C-CCCchHHHHHHHHHHHHhCCCEEEEECCCcchhh-hcHHHHHHhcccCcEEEe
Q 019265 265 INYDPCLVNLISKTNIFIVEGYL--F-ELPDTIRTITKACEVAHRSGALVAVTASDVTCIE-RHYDDFWYEYYMVLIVVL 340 (343)
Q Consensus 265 l~~~di~~~~i~~adiv~isG~~--l-~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~-~~~e~l~elL~~vDIlf~ 340 (343)
++++++... -.+.++|+++.-. . -...+.+.+.++.+.|+++|+.+++|-....... ........+...+|+++.
T Consensus 126 ~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~ 204 (359)
T 3pj0_A 126 LTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYV 204 (359)
T ss_dssp CCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEE
T ss_pred cCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEE
Confidence 344444322 3467888884221 0 0001367888999999999999999954321110 000012333457788876
Q ss_pred ec
Q 019265 341 EF 342 (343)
Q Consensus 341 ~~ 342 (343)
++
T Consensus 205 s~ 206 (359)
T 3pj0_A 205 SF 206 (359)
T ss_dssp ES
T ss_pred ec
Confidence 54
No 98
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=22.77 E-value=60 Score=29.29 Aligned_cols=54 Identities=13% Similarity=0.100 Sum_probs=37.6
Q ss_pred CceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEe
Q 019265 277 KTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVL 340 (343)
Q Consensus 277 ~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~ 340 (343)
+++++.+..-.. +.+.+.++.+|+.|+++.+.+++.... +.++++++.+|++.+
T Consensus 109 GAd~itvH~Ea~------~~~~~~i~~ir~~G~k~Gvalnp~Tp~----e~l~~~l~~vD~Vlv 162 (246)
T 3inp_A 109 GATSIVFHPEAS------EHIDRSLQLIKSFGIQAGLALNPATGI----DCLKYVESNIDRVLI 162 (246)
T ss_dssp TCSEEEECGGGC------SCHHHHHHHHHTTTSEEEEEECTTCCS----GGGTTTGGGCSEEEE
T ss_pred CCCEEEEccccc------hhHHHHHHHHHHcCCeEEEEecCCCCH----HHHHHHHhcCCEEEE
Confidence 789999974321 245778888899999888887764322 335677778888753
No 99
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=22.35 E-value=59 Score=28.77 Aligned_cols=55 Identities=7% Similarity=-0.036 Sum_probs=37.3
Q ss_pred CCceEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEe
Q 019265 276 SKTNIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVL 340 (343)
Q Consensus 276 ~~adiv~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~ 340 (343)
.++|++++..-.. +.+.+.++.+|++|+++.+.+++.... +.++++++.+|++.+
T Consensus 86 aGad~itvH~Ea~------~~~~~~i~~i~~~G~k~gval~p~t~~----e~l~~~l~~~D~Vl~ 140 (228)
T 3ovp_A 86 AGANQYTFHLEAT------ENPGALIKDIRENGMKVGLAIKPGTSV----EYLAPWANQIDMALV 140 (228)
T ss_dssp HTCSEEEEEGGGC------SCHHHHHHHHHHTTCEEEEEECTTSCG----GGTGGGGGGCSEEEE
T ss_pred cCCCEEEEccCCc------hhHHHHHHHHHHcCCCEEEEEcCCCCH----HHHHHHhccCCeEEE
Confidence 3789999964221 235678888899999888887754322 335567778887753
No 100
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=22.32 E-value=4.2e+02 Score=23.61 Aligned_cols=112 Identities=9% Similarity=-0.017 Sum_probs=61.0
Q ss_pred ceEEecCChHHHHHHHHHHhCCCCCCCCCCceEEEEEcCCChHHHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCC
Q 019265 173 SYKAAAGGSLSNSLVALARLGGKPIGGPALNVAMTGSVGSDPLGGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQ 252 (343)
Q Consensus 173 ~~~~~~GGsa~NvA~aLArLG~~~~~~~~~~v~lig~VG~D~~G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGe 252 (343)
......||..+|.+...+.++- .+..++..-+-.. +...++..|.....+.... +++
T Consensus 83 ~v~~~~g~~~a~~~~~~~l~~~-------gd~Vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~-----------~~~- 139 (375)
T 3op7_A 83 QILQTNGATGANLLVLYSLIEP-------GDHVISLYPTYQQ----LYDIPKSLGAEVDLWQIEE-----------ENG- 139 (375)
T ss_dssp GEEEESHHHHHHHHHHHHHCCT-------TCEEEEEESSCTH----HHHHHHHTTCEEEEEEEEG-----------GGT-
T ss_pred hEEEcCChHHHHHHHHHHhcCC-------CCEEEEeCCCchh----HHHHHHHcCCEEEEEeccc-----------cCC-
Confidence 4557788888876665555432 1455555544432 2344555665544332210 011
Q ss_pred eEEEEecCCCCCCCCchhhhhccCCceEEEEcCcCC-C-CCchHHHHHHHHHHHHhCCCEEEEECCC
Q 019265 253 RAMLAYQGTSSTINYDPCLVNLISKTNIFIVEGYLF-E-LPDTIRTITKACEVAHRSGALVAVTASD 317 (343)
Q Consensus 253 Rt~i~~~Ga~~~l~~~di~~~~i~~adiv~isG~~l-~-~p~s~~~i~~ll~~Ak~~G~~V~fD~s~ 317 (343)
..++++++...+-.+.++|++..... . ...+.+.+.++.+.|+++|+.+++|-..
T Consensus 140 ----------~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~ 196 (375)
T 3op7_A 140 ----------WLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVY 196 (375)
T ss_dssp ----------TEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred ----------CCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 01233333322224677787763211 0 0013677999999999999999999764
No 101
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=21.50 E-value=1.8e+02 Score=21.23 Aligned_cols=41 Identities=24% Similarity=0.278 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEE
Q 019265 216 GGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAML 256 (343)
Q Consensus 216 G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i 256 (343)
=+.+.+.|++.|+...............+.+.||+|.+--+
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel 125 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEI 125 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEE
Confidence 46788899999998765332222222455678999987544
No 102
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=21.37 E-value=1.4e+02 Score=22.25 Aligned_cols=46 Identities=15% Similarity=0.067 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCCcceeeeCCCCceEEEEEECCCCCeEEEEecCC
Q 019265 216 GGFYRAKLRRANVAFCSEPIKDGTTGTVIVLTTPDAQRAMLAYQGT 261 (343)
Q Consensus 216 G~~I~~~L~~~GVd~~~v~~~~~~Tg~~iVlid~dGeRt~i~~~Ga 261 (343)
=+.+.+.|++.|+............+..+.+.||+|.+--+..+..
T Consensus 79 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~ 124 (133)
T 2p7o_A 79 VDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTL 124 (133)
T ss_dssp HHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSSC
T ss_pred HHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCCh
Confidence 3567788888898865432211123455667899998866665543
No 103
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=20.51 E-value=1.7e+02 Score=24.64 Aligned_cols=60 Identities=8% Similarity=-0.043 Sum_probs=35.7
Q ss_pred eEEEEcCcCCCCCchHHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhcccCcEEEeec
Q 019265 279 NIFIVEGYLFELPDTIRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEYYMVLIVVLEF 342 (343)
Q Consensus 279 div~isG~~l~~p~s~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL~~vDIlf~~~ 342 (343)
..|.++|-.... .++.+.++++.+++.|..+.+..+..... ..+.+.++++.+|.+.+++
T Consensus 71 ~~i~~~GGEP~l--~~~~l~~l~~~~~~~~~~i~i~Tng~~~~--~~~~~~~l~~~~~~v~isl 130 (245)
T 3c8f_A 71 GGVTASGGEAIL--QAEFVRDWFRACKKEGIHTCLDTNGFVRR--YDPVIDELLEVTDLVMLDL 130 (245)
T ss_dssp CEEEEEESCGGG--GHHHHHHHHHHHHTTTCCEEEEECCCCCC--CCHHHHHHHHTCSEEEEEC
T ss_pred CeEEEECCCcCC--CHHHHHHHHHHHHHcCCcEEEEeCCCcCc--CHHHHHHHHHhCCEEEEeC
Confidence 455555521111 24557889999999898888877653210 2344555666677766654
No 104
>2bp3_S Platelet glycoprotein IB alpha chain; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens}
Probab=20.46 E-value=41 Score=19.51 Aligned_cols=12 Identities=42% Similarity=1.010 Sum_probs=8.6
Q ss_pred cccceEEEccCC
Q 019265 55 KGGGFLWVSPSS 66 (343)
Q Consensus 55 ~~~~~~~~~~~~ 66 (343)
...=||||-|.+
T Consensus 9 rsslflwvr~ng 20 (26)
T 2bp3_S 9 RSSLFLWVRPNG 20 (26)
T ss_pred hheEEEEEccCC
Confidence 344599998865
No 105
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=20.22 E-value=67 Score=30.52 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHHhCCCEEEEECCC
Q 019265 293 TIRTITKACEVAHRSGALVAVTASD 317 (343)
Q Consensus 293 s~~~i~~ll~~Ak~~G~~V~fD~s~ 317 (343)
+.+.+.++++.|+++|++|++|...
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4789999999999999999999864
No 106
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=20.15 E-value=1.1e+02 Score=30.19 Aligned_cols=49 Identities=4% Similarity=-0.162 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCcchhhhcHHHHHHhc--ccCcEEEeec
Q 019265 294 IRTITKACEVAHRSGALVAVTASDVTCIERHYDDFWYEY--YMVLIVVLEF 342 (343)
Q Consensus 294 ~~~i~~ll~~Ak~~G~~V~fD~s~~~~~~~~~e~l~elL--~~vDIlf~~~ 342 (343)
.+.+.++.+.|+++|+++.+|-..-.......+...+.+ .++|.+.++.
T Consensus 214 ~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~ 264 (450)
T 3bc8_A 214 PDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSL 264 (450)
T ss_dssp CCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEH
T ss_pred ecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECC
Confidence 466888999999999999999654211222334454556 6799988763
Done!