Query 019267
Match_columns 343
No_of_seqs 307 out of 1231
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 08:04:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019267.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019267hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02370 acyl-ACP thioesterase 100.0 5E-109 1E-113 821.8 33.5 333 1-333 1-334 (419)
2 PF12590 Acyl-thio_N: Acyl-ATP 100.0 1.8E-65 4E-70 423.8 9.2 124 1-125 1-129 (129)
3 PF01643 Acyl-ACP_TE: Acyl-ACP 100.0 3.1E-44 6.7E-49 339.2 17.4 196 136-333 1-198 (261)
4 COG3884 FatA Acyl-ACP thioeste 100.0 1.2E-31 2.7E-36 245.0 11.4 182 137-332 2-184 (250)
5 PRK10800 acyl-CoA thioesterase 100.0 6.3E-27 1.4E-31 197.9 18.7 128 138-272 2-129 (130)
6 TIGR02799 thio_ybgC tol-pal sy 99.9 2.5E-25 5.4E-30 185.8 16.6 124 139-270 1-125 (126)
7 COG0824 FcbC Predicted thioest 99.9 3E-24 6.4E-29 185.0 18.3 132 136-275 3-134 (137)
8 TIGR00051 acyl-CoA thioester h 99.9 3.5E-24 7.6E-29 175.6 16.0 117 142-265 1-117 (117)
9 PF13279 4HBT_2: Thioesterase- 99.9 5.3E-21 1.2E-25 158.7 17.2 119 145-272 1-121 (121)
10 PRK07531 bifunctional 3-hydrox 99.9 5E-21 1.1E-25 196.2 18.4 136 136-279 343-478 (495)
11 cd00586 4HBT 4-hydroxybenzoyl- 99.8 3.2E-17 7E-22 130.1 15.5 110 139-255 1-110 (110)
12 cd03442 BFIT_BACH Brown fat-in 99.4 3.3E-11 7.1E-16 99.2 15.8 113 137-265 6-123 (123)
13 cd03440 hot_dog The hotdog fol 99.1 7.4E-09 1.6E-13 76.7 13.7 98 140-251 2-99 (100)
14 PF03061 4HBT: Thioesterase su 98.9 1.9E-08 4E-13 76.4 11.9 79 153-245 1-79 (79)
15 cd03443 PaaI_thioesterase PaaI 98.8 4.6E-07 9.9E-12 73.4 14.8 102 136-252 11-112 (113)
16 PF01643 Acyl-ACP_TE: Acyl-ACP 98.7 9.9E-08 2.1E-12 90.5 10.6 97 135-251 162-259 (261)
17 PLN02370 acyl-ACP thioesterase 98.5 7.6E-07 1.6E-11 89.9 10.8 96 139-254 302-403 (419)
18 PRK10694 acyl-CoA esterase; Pr 98.5 7.8E-06 1.7E-10 70.3 15.3 111 140-266 13-131 (133)
19 COG1607 Acyl-CoA hydrolase [Li 98.0 0.00024 5.3E-09 62.9 15.3 113 141-268 16-132 (157)
20 TIGR00369 unchar_dom_1 unchara 97.8 0.0012 2.5E-08 54.6 13.8 98 140-252 19-116 (117)
21 TIGR00051 acyl-CoA thioester h 97.7 1.6E-05 3.4E-10 64.7 1.7 27 305-331 2-28 (117)
22 COG3884 FatA Acyl-ACP thioeste 97.7 0.00017 3.7E-09 67.2 8.0 89 137-251 151-239 (250)
23 COG0824 FcbC Predicted thioest 97.6 2.6E-05 5.7E-10 67.1 1.2 29 302-330 7-35 (137)
24 TIGR02799 thio_ybgC tol-pal sy 97.5 3.4E-05 7.4E-10 64.0 1.6 27 304-330 4-30 (126)
25 PRK10800 acyl-CoA thioesterase 97.5 3.9E-05 8.5E-10 64.5 1.8 28 304-331 6-33 (130)
26 TIGR02286 PaaD phenylacetic ac 97.5 0.0046 1E-07 50.9 13.9 97 140-253 17-113 (114)
27 PLN02647 acyl-CoA thioesterase 97.5 0.0019 4.1E-08 65.9 13.3 118 142-266 97-221 (437)
28 PRK10293 acyl-CoA esterase; Pr 97.1 0.031 6.8E-07 48.2 14.6 100 140-254 37-136 (136)
29 COG5496 Predicted thioesterase 96.9 0.052 1.1E-06 46.4 14.2 110 134-258 2-118 (130)
30 PRK10254 thioesterase; Provisi 96.7 0.11 2.4E-06 44.9 15.5 100 140-254 37-136 (137)
31 PRK11688 hypothetical protein; 96.7 0.072 1.6E-06 46.5 14.1 111 140-253 40-153 (154)
32 cd00586 4HBT 4-hydroxybenzoyl- 96.6 0.00091 2E-08 52.4 1.4 29 304-332 4-32 (110)
33 COG2050 PaaI HGG motif-contain 96.4 0.17 3.6E-06 43.4 14.3 104 139-256 36-139 (141)
34 cd03449 R_hydratase (R)-hydrat 96.4 0.055 1.2E-06 44.5 10.8 57 194-251 68-126 (128)
35 KOG3328 HGG motif-containing t 96.3 0.065 1.4E-06 47.0 11.1 100 140-253 40-139 (148)
36 KOG4366 Predicted thioesterase 95.9 0.0036 7.8E-08 56.7 1.5 103 146-255 58-161 (213)
37 PLN02322 acyl-CoA thioesterase 95.8 0.58 1.3E-05 41.4 15.2 102 140-255 29-135 (154)
38 PRK07531 bifunctional 3-hydrox 95.3 0.0074 1.6E-07 62.5 1.3 27 304-330 349-375 (495)
39 PLN02647 acyl-CoA thioesterase 95.2 0.67 1.4E-05 47.6 15.2 114 139-266 291-414 (437)
40 cd01288 FabZ FabZ is a 17kD be 95.1 0.54 1.2E-05 38.8 12.0 81 161-253 50-130 (131)
41 COG4109 Predicted transcriptio 95.0 0.19 4E-06 50.1 9.9 104 131-251 325-428 (432)
42 cd03455 SAV4209 SAV4209 is a S 94.8 0.25 5.4E-06 41.0 9.1 55 196-251 67-122 (123)
43 cd00556 Thioesterase_II Thioes 94.8 0.2 4.3E-06 39.2 8.0 57 195-252 42-98 (99)
44 PF14539 DUF4442: Domain of un 94.5 0.65 1.4E-05 39.5 11.2 99 138-252 30-131 (132)
45 PRK13691 (3R)-hydroxyacyl-ACP 94.3 0.57 1.2E-05 41.7 10.7 61 197-258 85-149 (166)
46 PRK00006 fabZ (3R)-hydroxymyri 94.1 3.3 7.1E-05 35.3 16.3 58 196-255 88-146 (147)
47 cd03441 R_hydratase_like (R)-h 94.0 0.62 1.3E-05 37.9 9.7 56 194-250 66-125 (127)
48 TIGR01750 fabZ beta-hydroxyacy 93.9 3 6.5E-05 35.2 14.1 87 156-252 53-139 (140)
49 PRK13692 (3R)-hydroxyacyl-ACP 93.7 0.88 1.9E-05 40.2 10.8 61 198-259 86-150 (159)
50 cd03447 FAS_MaoC FAS_MaoC, the 93.7 0.87 1.9E-05 38.5 10.3 55 197-251 69-123 (126)
51 cd00493 FabA_FabZ FabA/Z, beta 93.5 3 6.5E-05 34.2 13.1 85 154-248 42-126 (131)
52 cd03453 SAV4209_like SAV4209_l 93.2 0.81 1.7E-05 38.2 9.2 52 198-250 70-125 (127)
53 cd03454 YdeM YdeM is a Bacillu 93.1 0.56 1.2E-05 39.6 8.3 51 201-252 81-138 (140)
54 cd03446 MaoC_like MoaC_like 93.1 0.62 1.4E-05 39.1 8.5 51 201-252 83-139 (140)
55 PRK04424 fatty acid biosynthes 92.9 1.3 2.8E-05 40.1 10.7 59 193-253 123-181 (185)
56 cd03451 FkbR2 FkbR2 is a Strep 92.2 0.86 1.9E-05 38.6 8.2 55 198-253 81-142 (146)
57 TIGR02447 yiiD_Cterm thioester 92.1 7 0.00015 33.5 14.0 100 140-254 25-137 (138)
58 PF13452 MaoC_dehydrat_N: N-te 90.2 1.5 3.3E-05 36.5 7.7 52 194-246 73-131 (132)
59 PF13622 4HBT_3: Thioesterase- 89.9 2.4 5.3E-05 39.2 9.5 57 196-255 34-90 (255)
60 cd03445 Thioesterase_II_repeat 89.9 3.3 7.2E-05 33.1 9.0 53 197-251 40-92 (94)
61 PRK08190 bifunctional enoyl-Co 89.4 3.2 7E-05 42.8 10.8 66 195-261 82-149 (466)
62 cd03452 MaoC_C MaoC_C The C-t 89.3 2.3 5E-05 36.4 8.2 51 201-252 81-137 (142)
63 PLN02864 enoyl-CoA hydratase 87.7 3.1 6.7E-05 40.8 8.8 59 197-255 95-157 (310)
64 PF07977 FabA: FabA-like domai 84.1 18 0.0004 30.4 10.9 102 139-248 27-138 (138)
65 cd01289 FabA_like Domain of un 81.5 32 0.0007 29.3 14.3 88 154-251 45-134 (138)
66 cd03442 BFIT_BACH Brown fat-in 81.2 1.1 2.4E-05 36.1 2.2 29 303-331 10-38 (123)
67 cd03440 hot_dog The hotdog fol 80.8 0.85 1.8E-05 32.6 1.2 28 305-332 5-32 (100)
68 TIGR00189 tesB acyl-CoA thioes 78.6 9.5 0.00021 35.8 7.9 54 197-252 45-98 (271)
69 KOG4366 Predicted thioesterase 76.6 0.71 1.5E-05 42.1 -0.3 16 310-325 60-76 (213)
70 PRK13188 bifunctional UDP-3-O- 74.9 36 0.00077 35.4 11.4 60 194-255 401-461 (464)
71 COG2030 MaoC Acyl dehydratase 74.7 19 0.00041 31.6 8.2 59 195-254 93-155 (159)
72 cd03448 HDE_HSD HDE_HSD The R 71.6 28 0.0006 29.2 8.2 48 196-248 70-117 (122)
73 PRK10526 acyl-CoA thioesterase 69.4 24 0.00051 34.0 8.2 55 196-252 55-109 (286)
74 COG0764 FabA 3-hydroxymyristoy 68.3 68 0.0015 28.1 10.1 62 194-256 85-146 (147)
75 PF03756 AfsA: A-factor biosyn 67.0 74 0.0016 26.5 12.8 59 193-253 69-132 (132)
76 PF01575 MaoC_dehydratas: MaoC 67.0 13 0.00028 30.7 5.2 34 195-228 75-108 (122)
77 cd03444 Thioesterase_II_repeat 66.8 39 0.00085 27.3 7.9 56 196-252 48-103 (104)
78 cd01287 FabA FabA, beta-hydrox 61.9 1.1E+02 0.0024 26.7 13.5 92 154-254 50-147 (150)
79 cd03450 NodN NodN (nodulation 53.8 1.4E+02 0.003 25.9 9.5 29 196-224 85-113 (149)
80 TIGR02278 PaaN-DH phenylacetic 53.6 42 0.00091 36.3 7.5 50 201-251 604-659 (663)
81 PRK11563 bifunctional aldehyde 52.8 47 0.001 36.0 7.7 49 202-251 617-671 (675)
82 PRK13693 (3R)-hydroxyacyl-ACP 52.3 1.5E+02 0.0033 25.3 9.5 52 199-251 81-139 (142)
83 PF03061 4HBT: Thioesterase su 51.8 10 0.00022 27.9 1.7 18 315-332 1-18 (79)
84 PLN02864 enoyl-CoA hydratase 51.8 73 0.0016 31.2 8.2 51 197-252 254-304 (310)
85 PF13622 4HBT_3: Thioesterase- 46.6 2E+02 0.0044 26.3 10.0 54 198-252 200-254 (255)
86 PF02551 Acyl_CoA_thio: Acyl-C 44.3 1.6E+02 0.0034 25.5 8.1 53 197-251 76-130 (131)
87 PLN02868 acyl-CoA thioesterase 43.8 81 0.0018 31.8 7.4 55 197-253 182-236 (413)
88 TIGR00189 tesB acyl-CoA thioes 43.4 1.5E+02 0.0031 27.8 8.7 55 197-252 215-269 (271)
89 PRK05174 3-hydroxydecanoyl-(ac 33.3 3.5E+02 0.0076 24.1 12.9 81 159-254 81-165 (172)
90 PF09500 YiiD_Cterm: Putative 33.0 3.3E+02 0.0072 23.7 12.7 90 149-254 39-143 (144)
91 COG1946 TesB Acyl-CoA thioeste 32.1 5E+02 0.011 25.5 12.3 133 100-254 148-283 (289)
92 PF14765 PS-DH: Polyketide syn 28.3 3.7E+02 0.008 24.8 8.7 54 196-250 230-284 (295)
93 PF11456 DUF3019: Protein of u 27.5 1.7E+02 0.0037 24.0 5.5 35 231-265 65-99 (102)
94 PRK10526 acyl-CoA thioesterase 27.4 2.9E+02 0.0062 26.5 7.9 57 196-254 226-283 (286)
95 KOG2763 Acyl-CoA thioesterase 26.5 3.2E+02 0.0069 27.6 8.1 108 152-266 22-136 (357)
96 PHA02582 10 baseplate wedge su 22.2 1.7E+02 0.0036 31.2 5.3 72 193-265 218-292 (604)
No 1
>PLN02370 acyl-ACP thioesterase
Probab=100.00 E-value=5.1e-109 Score=821.82 Aligned_cols=333 Identities=75% Similarity=1.123 Sum_probs=317.0
Q ss_pred ChhccccccccccCCCCCCCcccccCCCCCCcCCccccCC-CCcceeeccccCCCccCCccceeccCcccccCCCCCCCC
Q 019267 1 MVATAAASAFFPVSSPSGDSVAKTKNLGSANLGGIKSKSS-SGSLQVKANAQAPSKINGTSVGLTTPAESLKNGDISTSS 79 (343)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (343)
|||++|+|||||||+|++++++.++|.++++++|||+||+ +|||||||||||+|||||++|+|++++++++++|++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (419)
T PLN02370 1 MVATAATSSFFPVPSPSGDAKAKKFGSGSASLGGIKSKSASSGALQVKANAQAPPKINGSPVGLTGSVEIVKTDEDVVSS 80 (419)
T ss_pred CchhhhhcccccCCCCCCCcccccCCCCcccccccccCCCCCCceeeeccccCCCcccCceeecccccccccccccCCCC
Confidence 9999999999999999999977788889999999999999 899999999999999999999999999999999997779
Q ss_pred CCcccccccCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCcccCcccccccccCCeeEEEEEEeecCCCCCCCCcCHH
Q 019267 80 PPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLVDPFGIGKIVQDGFIFRQNFSIRSYEIGADGTASIE 159 (343)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~vf~~~~~VR~~D~D~~GhV~~~ 159 (343)
|||||||||||||||||||||||||||||||||||||++|||||+||||+|+|+||+++|+++|+||+||||.+|++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~f~Ir~yEvD~~g~lsl~ 160 (419)
T PLN02370 81 PAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGIGRIVQDGLVFRQNFSIRSYEIGADRTASIE 160 (419)
T ss_pred CCCcchhhcCCcHHHHHHHHHHHHHhhhhhhhhhcccCCCCcccccccccCceeccCcEEEEEEEEeeEEECCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECC
Q 019267 160 TLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAK 239 (343)
Q Consensus 160 ~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~ 239 (343)
.+++||||++.+|++++|++++||+..++|.+.|++|||++++|+|+|+|+|||+|+|+||+.+++++++.|+|.|+|.+
T Consensus 161 ~L~n~lQd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLtr~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~~ 240 (419)
T PLN02370 161 TLMNHLQETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCK 240 (419)
T ss_pred HHHHHHHHHHHHHHHHhCccccccccHHHHHhCCceEEEEEEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEECC
Confidence 99999999999999999998888987778999999999999999999999999999999999999999999999999965
Q ss_pred CCcEEEEEEEEEEEEecCCCcccCCCHHHHHhhcccccCCCCCCCcCCCCCCCCCCCccceeeccceeeecCCccccCch
Q 019267 240 TGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTVSEIFFLMVIVIF 319 (343)
Q Consensus 240 ~Gevia~A~S~wV~iD~~TRRp~rIPeevr~~i~~y~~~~~~~i~~~~~Kl~k~d~~~~~~i~~~~~vR~SDID~NgHVN 319 (343)
+|+++++|.|+||+||++||||+|||+++++.+.+|..+..+.+++..+|++++++..+++.+.+++|||+|||.|||||
T Consensus 241 ~Ge~la~A~SvWV~mD~~TRRpvRIP~Evr~~i~~y~~~~~~~i~~~~~kl~~l~~~~~~~~~~~~~VRysDLD~NgHVN 320 (419)
T PLN02370 241 TGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIEPYFLNSDPVVNEDSRKLPKLDDKTADYIRKGLTPRWSDLDVNQHVN 320 (419)
T ss_pred CCeEEEEEEEEEEEEECCCCcccCCCHHHHHhhhhcccccccccccccccCCccccccccceeeeeeecHHHCcccCccc
Confidence 79999999999999999999999999999999999988766667666889999886555667777999999999999999
Q ss_pred hHHHHHHHhhcccc
Q 019267 320 LLLYCDISCSFLFF 333 (343)
Q Consensus 320 Na~Yid~~~d~l~~ 333 (343)
|++|++|++|.||.
T Consensus 321 NvkYi~Wild~lP~ 334 (419)
T PLN02370 321 NVKYIGWILESAPP 334 (419)
T ss_pred cHHHHHHHHhhCch
Confidence 99999999999994
No 2
>PF12590 Acyl-thio_N: Acyl-ATP thioesterase; InterPro: IPR021113 This entry represents the N-terminal domain of acyl-ATP thioesterases from bacteria and eukaryotes. These proteins are typically between 120 and 131 amino acids in length. The plant acyl-acyl carrier protein (ACP) thioesterases (TEs) play an essential role in chain termination during de novo fatty acid synthesis [].; GO: 0016790 thiolester hydrolase activity
Probab=100.00 E-value=1.8e-65 Score=423.76 Aligned_cols=124 Identities=73% Similarity=1.036 Sum_probs=116.2
Q ss_pred ChhccccccccccCCCCCCCcc--cccCC--CCCCcCCccccCC-CCcceeeccccCCCccCCccceeccCcccccCCCC
Q 019267 1 MVATAAASAFFPVSSPSGDSVA--KTKNL--GSANLGGIKSKSS-SGSLQVKANAQAPSKINGTSVGLTTPAESLKNGDI 75 (343)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (343)
|||++|+|||||||++++++++ +++|+ +++|+||||+|++ +|||||||||||+|||||++|+|+++++.++++|+
T Consensus 1 MvAtaAaSaFFpvps~~~~~~~~s~~~G~~p~sl~~rgik~k~~~sg~~qvKanaqA~pKiNG~~v~l~~~~~~~~~~~~ 80 (129)
T PF12590_consen 1 MVATAAASAFFPVPSPSPSPKASSGKLGNGPDSLDVRGIKAKSASSGGLQVKANAQAPPKINGSKVGLKTGSEGTKEDDS 80 (129)
T ss_pred ChhhhhhhhccCCCCCCCCCccccccCCCCCCcccccccccCcCCCCCeeeecCCcCCCcccCccccccccccccccccc
Confidence 9999999999999999999988 78888 7777889999999 99999999999999999999999997777666655
Q ss_pred CCCCCCcccccccCCChHHHHHHHHHHHHHhhhhhhcccCCCCCCCcccC
Q 019267 76 STSSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLVD 125 (343)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (343)
++||+|||||||||||||||||||||||||||||||||||+||||||+|
T Consensus 81 -~~s~~pRTFiNQLPDWSMLLAAITTIFlAAEKQW~mLDwKpkRPDML~D 129 (129)
T PF12590_consen 81 -SSSPAPRTFINQLPDWSMLLAAITTIFLAAEKQWTMLDWKPKRPDMLVD 129 (129)
T ss_pred -CCCCCchhHhhhCccHHHHHHHHHHHHHHhhhhhhhhcccCCCcccccC
Confidence 7899999999999999999999999999999999999999999999997
No 3
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=100.00 E-value=3.1e-44 Score=339.25 Aligned_cols=196 Identities=33% Similarity=0.563 Sum_probs=137.6
Q ss_pred CeeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEE
Q 019267 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (343)
Q Consensus 136 g~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V 215 (343)
|.+|+++++|+++|||.+|++++..+++|||+++..|+.++|+..+.||.+++|.+.|++|||+|++|++.|+|++||+|
T Consensus 1 g~~y~~~~~v~~~e~d~~~~l~l~~l~~~~qe~a~~h~~~lG~~~~~~~~~~~l~~~~~~Wvl~r~~i~i~r~P~~~e~i 80 (261)
T PF01643_consen 1 GLVYEKEFTVRYYECDPNGRLKLSALLNYFQEAATEHAESLGFGMDYFGSTPELKKQGLAWVLSRYQIEIHRYPRWGEKI 80 (261)
T ss_dssp ---EEEEEE--GGGB-TTSBB-HHHHHHHHHHHHHHHHHHTT-SHHH------HHCTTEEEEEEEEEEEESS--BTT-EE
T ss_pred CceEEEEEEEcceeeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcccchhhhhHhhcCcEEEEEEEEEEEEecCCCCCEE
Confidence 67899999999999999999999999999999999999999985544444455899999999999999999999999999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCCcccCCCHHHHHhhcccccCCCCCCCcCCCCCCCC--
Q 019267 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKL-- 293 (343)
Q Consensus 216 ~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp~rIPeevr~~i~~y~~~~~~~i~~~~~Kl~k~-- 293 (343)
+|+||+.+.+++++.|+|.|+|..+|+++++|+|.||+||++||||+|+|+++.+.+..+..+.. .++...+++++
T Consensus 81 ~i~Tw~~~~~~~~~~R~f~i~d~~~G~~l~~a~s~WvliD~~trr~~ri~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 158 (261)
T PF01643_consen 81 TIETWPSGFKRFFAYRDFEIYDAEDGELLARATSIWVLIDLETRRPVRIPEEIIEEYGPFFPDEL--PEEDIRKLPKIPK 158 (261)
T ss_dssp EEEEEEEEE-SSEEEEEEEEE--TTS-EEEEEEEEEEEEETTT-SEE---GGCTCCGGGGB------T-EESSS------
T ss_pred EEEEEeccCCCcEEEEEEEEEECCCCcEEEEEEEEEEEEEhhhCCcccCCHHHHhhhhhhccccc--ccccccccccccc
Confidence 99999999999999999999993389999999999999999999999999988766643333321 11122333333
Q ss_pred CCCccceeeccceeeecCCccccCchhHHHHHHHhhcccc
Q 019267 294 GDSTADYVRRGLTVSEIFFLMVIVIFLLLYCDISCSFLFF 333 (343)
Q Consensus 294 d~~~~~~i~~~~~vR~SDID~NgHVNNa~Yid~~~d~l~~ 333 (343)
...........++|||||||+||||||++|++|++|.||.
T Consensus 159 ~~~~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~ 198 (261)
T PF01643_consen 159 NPPEEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPE 198 (261)
T ss_dssp ----TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-H
T ss_pred cCChhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcc
Confidence 2212233445689999999999999999999999999996
No 4
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=99.97 E-value=1.2e-31 Score=244.99 Aligned_cols=182 Identities=19% Similarity=0.245 Sum_probs=153.5
Q ss_pred eeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEE
Q 019267 137 FIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVN 216 (343)
Q Consensus 137 ~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~ 216 (343)
.++++.+.|.+++.|+.|++.....+++..++|..+...+|.+. ...+.+.|+.|+|.++.|++.|||.++|.|+
T Consensus 2 ~~~k~~~~vP~~~~d~~g~i~~~~~l~l~~~i~~~Qsi~lg~~~-----~~~lee~~l~WiV~~~~i~~ir~pef~e~it 76 (250)
T COG3884 2 SVDKQNMPVPFYWPDAVGDIDITSRLRLDLQIRGIQSIGLGQLD-----VAGLEEYHLLWIVRRTEIDVIRPPEFGEMIT 76 (250)
T ss_pred cchhhcCCCccchhhhcCCcchhhhhhhhhhhcceeecccchhh-----hhhHhhcCceEEEEEEEEEEeeccccCCcce
Confidence 35677888999999999999999999999999988777776321 2357889999999999999999999999999
Q ss_pred EEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCCcccCCCHHHHHhhcccccCCCCCCCcCCCCCC-CCCC
Q 019267 217 VETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLP-KLGD 295 (343)
Q Consensus 217 VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp~rIPeevr~~i~~y~~~~~~~i~~~~~Kl~-k~d~ 295 (343)
++||+..+.+++++|+|++.+ .|+.++++.+.|++||.+||||.++++++.+.+..-+..+..+..+ ++. .++.
T Consensus 77 i~t~~~s~~~ffcyrrf~~~~--~gg~Lie~~a~wilmn~dTrkp~ri~~d~la~~~~t~~~k~~r~~~---~l~~~~e~ 151 (250)
T COG3884 77 IETWCSSISNFFCYRRFRLDG--RGGGLIEIEAFWILMNRDTRKPARITDDLLAPFNLTTEKKRLRWPK---YLSSRLEA 151 (250)
T ss_pred EEEeeccccceEEEEEEEEec--CCCcEEEEEEEEEEEccccccceeccHHHhhhhcccchhheecccc---ccCccccc
Confidence 999999999999999999998 6888999999999999999999999999988776555444333221 111 1222
Q ss_pred CccceeeccceeeecCCccccCchhHHHHHHHhhccc
Q 019267 296 STADYVRRGLTVSEIFFLMVIVIFLLLYCDISCSFLF 332 (343)
Q Consensus 296 ~~~~~i~~~~~vR~SDID~NgHVNNa~Yid~~~d~l~ 332 (343)
.+...+.+||+|||+||||||++||+|++|+|+
T Consensus 152 ----s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~ 184 (250)
T COG3884 152 ----SEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLG 184 (250)
T ss_pred ----cccccceeEEEeeccccccccceehHHHHHHHh
Confidence 233458999999999999999999999999998
No 5
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.95 E-value=6.3e-27 Score=197.87 Aligned_cols=128 Identities=17% Similarity=0.240 Sum_probs=119.0
Q ss_pred eEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEE
Q 019267 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (343)
Q Consensus 138 vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~V 217 (343)
+|..+++|||+|||++|||+|++|++|||+|+.+|+..+|+ +. ..+.+.|.+|++++++++|++|+++||+|+|
T Consensus 2 ~f~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~~g~-----~~-~~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v 75 (130)
T PRK10800 2 LFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHF-----SQ-QALLAERVAFVVRKMTVEYYAPARLDDMLEV 75 (130)
T ss_pred ceEEEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHHcCC-----CH-HHHHhCCCEEEEEEEEEEEcCcccCCCEEEE
Confidence 57789999999999999999999999999999999999886 22 4566788999999999999999999999999
Q ss_pred EEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCCcccCCCHHHHHhh
Q 019267 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEI 272 (343)
Q Consensus 218 eTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp~rIPeevr~~i 272 (343)
+||+.++++.++...|++++. +|+++++|.++||++|.+++||++||+++++.+
T Consensus 76 ~t~v~~~~~~s~~~~~~i~~~-~g~~~a~~~~~~v~~d~~~~r~~~iP~~l~~~~ 129 (130)
T PRK10800 76 QSEITSMRGTSLTFTQRIVNA-EGTLLNEAEVLIVCVDPLKMKPRALPKSIVAEF 129 (130)
T ss_pred EEEEEeeCcEEEEEEEEEEcC-CCeEEEEEEEEEEEEECCCCcCcCCCHHHHHhh
Confidence 999999999999889999986 899999999999999999999999999998765
No 6
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.93 E-value=2.5e-25 Score=185.78 Aligned_cols=124 Identities=18% Similarity=0.233 Sum_probs=115.0
Q ss_pred EEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHH-hhCCceEEEEEeEEEEcccCCCCCEEEE
Q 019267 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAM-AKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (343)
Q Consensus 139 f~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l-~~~g~~WVV~r~~Iey~r~p~~gD~V~V 217 (343)
|+.+++|||+|||++|||++++|++||++|+.+++.++|+. . ..+ .+.|.+|++++++|+|.+|+++||+|.|
T Consensus 1 f~~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~~g~~-----~-~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v 74 (126)
T TIGR02799 1 FRWPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRALGFE-----Q-SALLEETGLVFVVRSMELDYLKPARLDDLLTV 74 (126)
T ss_pred CcceEEEEEeccCCCceEEechHHHHHHHHHHHHHHHcCCC-----H-HHHhhcCCcEEEEEEEEEEEcCcccCCCEEEE
Confidence 46689999999999999999999999999999999999872 2 345 3568999999999999999999999999
Q ss_pred EEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCCcccCCCHHHHH
Q 019267 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQ 270 (343)
Q Consensus 218 eTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp~rIPeevr~ 270 (343)
+||+.++++.++.+.|.|++ +|+++++|.++||++|.+++||+++|+++++
T Consensus 75 ~~~v~~~~~~~~~~~~~i~~--~g~~~a~~~~~~v~vd~~~~~~~~~p~~~~~ 125 (126)
T TIGR02799 75 TTRVVELKGASLVFAQEVRR--GDTLLCEATVEVACVDASDMRPRRLPAELRA 125 (126)
T ss_pred EEEEEecCceEEEEEEEEEe--CCEEEEEEEEEEEEEECCCCcCcCCCHHHhh
Confidence 99999999999999999996 7899999999999999999999999999875
No 7
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.92 E-value=3e-24 Score=184.99 Aligned_cols=132 Identities=20% Similarity=0.286 Sum_probs=122.4
Q ss_pred CeeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEE
Q 019267 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (343)
Q Consensus 136 g~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V 215 (343)
...|+.+++|||+|||++|||+|++|+.|||+|+.++++.+|+. ...+.+.|+.|+|++++|+|++|.++||.+
T Consensus 3 ~~~~~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar~~~l~~~g~~------~~~~~~~~~~~~v~~~~i~y~~p~~~~d~l 76 (137)
T COG0824 3 SFPFSTPIRVRYEDTDAMGHVNNANYLVFFEEARTEFLRALGFD------YADLEEGGIAFVVVEAEIDYLRPARLGDVL 76 (137)
T ss_pred CcceEEEEEEEhhhcCcccEEecchHHHHHHHHHHHHHHHcCCC------HHHHhhCCcEEEEEEEEeEECCCccCCCEE
Confidence 34678899999999999999999999999999999999998763 256777789999999999999999999999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCCcccCCCHHHHHhhccc
Q 019267 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPY 275 (343)
Q Consensus 216 ~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp~rIPeevr~~i~~y 275 (343)
+|+||+.++++.++...|+|++. ++++++|++++|++|.+++||+++|+++++.+..+
T Consensus 77 ~v~~~v~~~~~~s~~~~~~i~~~--~~l~a~~~~~~V~v~~~~~kp~~~P~~~~~~l~~~ 134 (137)
T COG0824 77 TVRTRVEELGGKSLTLGYEIVNE--DELLATGETTLVCVDLKTGKPVPLPPELREALEAL 134 (137)
T ss_pred EEEEEEEeecCeEEEEEEEEEeC--CEEEEEEEEEEEEEECCCCCcccCCHHHHHHHHHh
Confidence 99999999999999999999995 49999999999999999999999999999988765
No 8
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.92 E-value=3.5e-24 Score=175.61 Aligned_cols=117 Identities=13% Similarity=0.171 Sum_probs=108.1
Q ss_pred EEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEEE
Q 019267 142 NFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWV 221 (343)
Q Consensus 142 ~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTwv 221 (343)
+++|||+|||++|||++..|++|||+|+.+|++.+|+. . ..+.+.+++|++++++++|++|+++||+|+|+||+
T Consensus 1 ~~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~~g~~-----~-~~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~ 74 (117)
T TIGR00051 1 PVRVYYEDTDAQGIVYHANYLRYCERARTEFLRSLGFP-----Q-SVLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQI 74 (117)
T ss_pred CEEEEEeccCCCcEEEehHHHHHHHHHHHHHHHHcCCC-----H-HHHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEE
Confidence 36899999999999999999999999999999998862 2 46778899999999999999999999999999999
Q ss_pred EEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCCcccCCC
Q 019267 222 SASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMP 265 (343)
Q Consensus 222 ~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp~rIP 265 (343)
.++++.++.+.|+|++. +|++++.+.++||++|.+++|+++||
T Consensus 75 ~~~~~~s~~~~~~i~~~-~~~~~~~~~~~~v~~d~~~~r~~~ip 117 (117)
T TIGR00051 75 EELNGFSFVFSQEIFNE-DEALLKAATVIVVCVDPKKQKPVAIP 117 (117)
T ss_pred EecCcEEEEEEEEEEeC-CCcEEEeeEEEEEEEECCCCeEcCCC
Confidence 99999999999999985 67888888888999999999999997
No 9
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.87 E-value=5.3e-21 Score=158.73 Aligned_cols=119 Identities=20% Similarity=0.295 Sum_probs=100.3
Q ss_pred eecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEEEEEe
Q 019267 145 IRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS 224 (343)
Q Consensus 145 VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~ 224 (343)
|||+||| +|||+|++|++|+++|+.+++.+.|+ ...+...|+++++++.+|+|++|.++||+++|++++.++
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar~~~~~~~g~-------~~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~ 72 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEAREEFLEELGL-------YDELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEEI 72 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHHHHHHHHHTS-------CHHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEEE
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHHHHHHHhcch-------hhHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEEE
Confidence 7999999 99999999999999999999999886 256788899999999999999999999999999999999
Q ss_pred CCcEEEEEEEEEECCCCcE--EEEEEEEEEEEecCCCcccCCCHHHHHhh
Q 019267 225 GKNGMRRDWLIRNAKTGET--LTRATSLWVMMNKLTRRLSKMPDEVRQEI 272 (343)
Q Consensus 225 gr~~~~R~f~I~d~~~Gev--ia~A~S~wV~iD~~TRRp~rIPeevr~~i 272 (343)
++.++...|.|++.++|+. ++++.+++|++|.++ |+.++|++++++|
T Consensus 73 ~~~s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~~~-r~~~~P~~~~~~l 121 (121)
T PF13279_consen 73 GGKSFRFEQEIFRPADGKGELAATGRTVMVFVDYKT-RSVPIPDELREAL 121 (121)
T ss_dssp ESSEEEEEEEEEECSTTEEEEEEEEEEEEEEEETTT-CE-B--HHHHHHH
T ss_pred CCcEEEEEEEEEEcCCCceEEEEEEEEEEEEEeCCC-CcCCCCHHHHhcC
Confidence 9999999999998435655 999999999999999 6999999999864
No 10
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=99.86 E-value=5e-21 Score=196.17 Aligned_cols=136 Identities=10% Similarity=0.077 Sum_probs=123.6
Q ss_pred CeeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEE
Q 019267 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (343)
Q Consensus 136 g~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V 215 (343)
..++..+++|+++|||++|||+|.+|++||++++.+|+..+|++ ......+.+|++++++|+|++|+++||+|
T Consensus 343 ~~~~~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~~G~~-------~~~~~~~~~~vvv~~~i~y~rp~~~gD~v 415 (495)
T PRK07531 343 QPLRLVETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRLIGVD-------AAYVAAGHSYYTVETHIRHLGEAKAGQAL 415 (495)
T ss_pred CceEEEeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHHcCCC-------HHHHhcCCcEEEEEEEEEEcccCCCCCEE
Confidence 44567899999999999999999999999999999999999872 22334588999999999999999999999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCCcccCCCHHHHHhhcccccCC
Q 019267 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNS 279 (343)
Q Consensus 216 ~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp~rIPeevr~~i~~y~~~~ 279 (343)
+|+||+..+++.++.+.|+|++. +|++++++.++||++|.++||++++|+++++.+..+..+.
T Consensus 416 ~I~t~v~~~~~~s~~~~~~i~~~-~g~l~A~g~~~~v~vD~~trr~~~iP~e~r~~l~~~~~~~ 478 (495)
T PRK07531 416 HVETQLLSGDEKRLHLFHTLYDA-GGELIATAEHMLLHVDLKAGKAVPAPAAVLAALKPIAEAH 478 (495)
T ss_pred EEEEEEEecCCcEEEEEEEEECC-CCcEEEEEEEEEEEEECCCCccCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999984 8999999999999999999999999999999998776543
No 11
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=99.76 E-value=3.2e-17 Score=130.10 Aligned_cols=110 Identities=21% Similarity=0.239 Sum_probs=101.7
Q ss_pred EEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEE
Q 019267 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (343)
Q Consensus 139 f~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~Ve 218 (343)
|+.++.|+++|||.+||+++..|++|+++++..++.+.|+. ...+...+.+|++.+.+++|.+|+..||+|+|+
T Consensus 1 ~~~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~ 74 (110)
T cd00586 1 FTLEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLG------YDELEEQGLGLVVVELEIDYLRPLRLGDRLTVE 74 (110)
T ss_pred CcEEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHcCCC------HHHHHhCCceEEEEEeEeeEcCccCCCCEEEEE
Confidence 46789999999999999999999999999999999999863 234567899999999999999999999999999
Q ss_pred EEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEe
Q 019267 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMN 255 (343)
Q Consensus 219 Twv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD 255 (343)
+|+.+.++.++.+.+.+++. +|++++++.+.|+++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~-~g~~~a~~~~~~~~~d 110 (110)
T cd00586 75 TRVLRLGRKSFTFEQEIFRE-DGELLATAETVLVCVD 110 (110)
T ss_pred EEEEecCcEEEEEEEEEECC-CCeEEEEEEEEEEEeC
Confidence 99999999999999999985 7999999999999987
No 12
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=99.37 E-value=3.3e-11 Score=99.18 Aligned_cols=113 Identities=14% Similarity=0.075 Sum_probs=94.6
Q ss_pred eeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEe-EEEEcccCCCCCEE
Q 019267 137 FIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRM-QVVVDRYPTWNDVV 215 (343)
Q Consensus 137 ~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~-~Iey~r~p~~gD~V 215 (343)
-.+...++|++.++|+.|+++.+.|+.++++++..++.... . ..++.... +++|.+|..+||.|
T Consensus 6 ~~~~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~~~~-------------~--~~~~~~~~~~~~f~~p~~~gd~l 70 (123)
T cd03442 6 TELSTRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAYRHA-------------G--GRVVTASVDRIDFLKPVRVGDVV 70 (123)
T ss_pred cceEEEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHHHHh-------------C--CcEEEEEECceEEcCccccCcEE
Confidence 35677999999999999999999999999999977654221 1 12334445 79999999999999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECC----CCcEEEEEEEEEEEEecCCCcccCCC
Q 019267 216 NVETWVSASGKNGMRRDWLIRNAK----TGETLTRATSLWVMMNKLTRRLSKMP 265 (343)
Q Consensus 216 ~VeTwv~~~gr~~~~R~f~I~d~~----~Gevia~A~S~wV~iD~~TRRp~rIP 265 (343)
.++.++.+.++.++..++++++.+ ++++++++..++|++| .++||.++|
T Consensus 71 ~i~~~v~~~g~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~-~~~~~~~~p 123 (123)
T cd03442 71 ELSARVVYTGRTSMEVGVEVEAEDPLTGERRLVTSAYFTFVALD-EDGKPRPVP 123 (123)
T ss_pred EEEEEEEEecCCeEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC-CCCCeeeCC
Confidence 999999999999999999999852 2479999999999999 568998887
No 13
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=99.06 E-value=7.4e-09 Score=76.67 Aligned_cols=98 Identities=20% Similarity=0.197 Sum_probs=88.0
Q ss_pred EEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEE
Q 019267 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (343)
Q Consensus 140 ~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeT 219 (343)
...++|+++|+|.+++++...++.++++++..++...+. .+..+++.+.+++|.+|+..||.|.+++
T Consensus 2 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~g~~v~~~~ 68 (100)
T cd03440 2 VLRLTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGG-------------RGLGAVTLSLDVRFLRPVRPGDTLTVEA 68 (100)
T ss_pred EEEEEeCHHHcCcCCccchHHHHHHHHHHHHHHHHHhcc-------------CCCeEEEEEEEeEEecCCCCCCEEEEEE
Confidence 347899999999999999999999999999999886531 5678999999999999999999999999
Q ss_pred EEEEeCCcEEEEEEEEEECCCCcEEEEEEEEE
Q 019267 220 WVSASGKNGMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 220 wv~~~gr~~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
++...++..+.....+.+. +|++++.+...+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 99 (100)
T cd03440 69 EVVRVGRSSVTVEVEVRNE-DGKLVATATATF 99 (100)
T ss_pred EEEeccccEEEEEEEEECC-CCCEEEEEEEEe
Confidence 9999999888888888885 799999997765
No 14
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=98.94 E-value=1.9e-08 Score=76.40 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=71.2
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEE
Q 019267 153 DGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRD 232 (343)
Q Consensus 153 ~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~ 232 (343)
+|+|+.+.|+.|+++++..++...+. .+...++.+.+++|.+|.+.||.|++++|+.+.|+.++..+
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~~~~-------------~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~ 67 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRSHGG-------------DGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVE 67 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHS-------------STEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEE
T ss_pred CCEEhHHHHHHHHHHHHHHHHHHhcc-------------CCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEE
Confidence 59999999999999999999998763 16789999999999999999999999999999999999999
Q ss_pred EEEEECCCCcEEE
Q 019267 233 WLIRNAKTGETLT 245 (343)
Q Consensus 233 f~I~d~~~Gevia 245 (343)
++++++ +++++|
T Consensus 68 ~~v~~~-~~~~~~ 79 (79)
T PF03061_consen 68 VEVYSE-DGRLCA 79 (79)
T ss_dssp EEEEET-TSCEEE
T ss_pred EEEEEC-CCcEEC
Confidence 999996 777765
No 15
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=98.75 E-value=4.6e-07 Score=73.38 Aligned_cols=102 Identities=10% Similarity=0.036 Sum_probs=88.8
Q ss_pred CeeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEE
Q 019267 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (343)
Q Consensus 136 g~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V 215 (343)
+...+..+++...++|..|.++...|+.+++.++...+.... ..+...++.+++++|.+|+.. +.|
T Consensus 11 ~~~~~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~~~-------------~~~~~~~~~~~~i~f~~p~~~-~~v 76 (113)
T cd03443 11 PGRVVLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALSAL-------------PPGALAVTVDLNVNYLRPARG-GDL 76 (113)
T ss_pred CCeEEEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhhcc-------------CCCCceEEEEEEEeEEcCCCC-CeE
Confidence 345677899999999999999999999999999988776442 134567888999999999999 999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 216 ~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
.+++++.+.++.....+..+++. +|+++++|+.+|+
T Consensus 77 ~~~~~v~~~g~~~~~~~~~~~~~-~~~~~a~a~~~~~ 112 (113)
T cd03443 77 TARARVVKLGRRLAVVEVEVTDE-DGKLVATARGTFA 112 (113)
T ss_pred EEEEEEEecCceEEEEEEEEECC-CCCEEEEEEEEEe
Confidence 99999999999988888999985 6999999999886
No 16
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=98.70 E-value=9.9e-08 Score=90.47 Aligned_cols=97 Identities=18% Similarity=0.349 Sum_probs=70.6
Q ss_pred CCeeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCE
Q 019267 135 DGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDV 214 (343)
Q Consensus 135 ~g~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~ 214 (343)
....+..+++||++|+|.+|||||..|++|+.|+--..+. + ...+.++.|.|.++..+||+
T Consensus 162 ~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~~~----------------~---~~~~~~i~I~y~~E~~~gd~ 222 (261)
T PF01643_consen 162 EEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEEFL----------------E---KYQIKSIDINYKKEIRYGDT 222 (261)
T ss_dssp -TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HHHH----------------C---CEEEEEEEEEE-S--BTT-E
T ss_pred hhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcchhh----------------c---cCCcEEEEEEEccccCCCCE
Confidence 3556789999999999999999999999999887644332 1 23578999999999999999
Q ss_pred EEEEEEEEEeC-CcEEEEEEEEEECCCCcEEEEEEEEE
Q 019267 215 VNVETWVSASG-KNGMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 215 V~VeTwv~~~g-r~~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
|.+.+.+.... .....-.+.|.+. +|+.++++.+.|
T Consensus 223 i~~~~~~~~~~~~~~~~~~h~i~~~-~g~~~~~~~~~W 259 (261)
T PF01643_consen 223 ITSYTEVEKDEEEDGLSTLHEIRNE-DGEEVARARTEW 259 (261)
T ss_dssp EEEEEEEEEECCTTEEEEEEEEECT--TCEEEEEEEEE
T ss_pred EEEEEEEcccccCCceEEEEEEEcC-CCceEEEEEEEE
Confidence 99999876543 3344556889885 599999999999
No 17
>PLN02370 acyl-ACP thioesterase
Probab=98.49 E-value=7.6e-07 Score=89.93 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=69.6
Q ss_pred EEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEE
Q 019267 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (343)
Q Consensus 139 f~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~Ve 218 (343)
.+..++|||+|+|.||||||..|++|++|+.-.-+ + +. .-+.++.|+|+++..+||.|.+.
T Consensus 302 ~~~~~~VRysDLD~NgHVNNvkYi~Wild~lP~e~---------------l-~~---~~l~~i~I~Y~kE~~~gd~V~s~ 362 (419)
T PLN02370 302 IRKGLTPRWSDLDVNQHVNNVKYIGWILESAPPPI---------------M-ES---HELAAITLEYRRECGRDSVLQSL 362 (419)
T ss_pred eeeeeeecHHHCcccCccccHHHHHHHHhhCchhh---------------h-hc---ceEEEEEEEEcccCCCCCEEEEE
Confidence 34569999999999999999999999998653211 1 11 24788999999999999999988
Q ss_pred EEEEE--eCCc---E-EEEEEEEEECCCCcEEEEEEEEEEEE
Q 019267 219 TWVSA--SGKN---G-MRRDWLIRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 219 Twv~~--~gr~---~-~~R~f~I~d~~~Gevia~A~S~wV~i 254 (343)
+.+.+ .+.. . ....+.+.. ++|++++++++.|---
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~h~~~~-~dG~e~a~a~t~Wr~~ 403 (419)
T PLN02370 363 TAVSGTGIGNLGTAGDVECQHLLRL-EDGAEIVRGRTEWRPK 403 (419)
T ss_pred EeecccccccccCCCcceEEEEEEc-CCCeEEEEEEEEEEEC
Confidence 77532 1111 1 112234444 4899999999999743
No 18
>PRK10694 acyl-CoA esterase; Provisional
Probab=98.48 E-value=7.8e-06 Score=70.34 Aligned_cols=111 Identities=15% Similarity=0.059 Sum_probs=88.7
Q ss_pred EEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEe-EEEEcccCCCCCEEEEE
Q 019267 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRM-QVVVDRYPTWNDVVNVE 218 (343)
Q Consensus 140 ~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~-~Iey~r~p~~gD~V~Ve 218 (343)
...+.+...|++..|.++=..+|.|+.+++.-...... +..++.+++ .++|.+|.+.||.|+++
T Consensus 13 ~~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~~~~---------------~~~~vtv~vd~i~F~~Pv~~Gd~l~~~ 77 (133)
T PRK10694 13 VLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIA---------------HGRVVTVRVEGMTFLRPVAVGDVVCCY 77 (133)
T ss_pred EEEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHHHHc---------------CCceEEEEECceEECCCcccCcEEEEE
Confidence 34678999999999999999999999998765554321 123566777 77999999999999999
Q ss_pred EEEEEeCCcEEEEEEEEEECC-----CC--cEEEEEEEEEEEEecCCCcccCCCH
Q 019267 219 TWVSASGKNGMRRDWLIRNAK-----TG--ETLTRATSLWVMMNKLTRRLSKMPD 266 (343)
Q Consensus 219 Twv~~~gr~~~~R~f~I~d~~-----~G--evia~A~S~wV~iD~~TRRp~rIPe 266 (343)
.++...|+.++..+.+++.+. .| +.++++..++|.+| +.+||.++|+
T Consensus 78 a~V~~~g~sS~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd-~~g~p~~vp~ 131 (133)
T PRK10694 78 ARCVKTGTTSISINIEVWVKKVASEPIGQRYKATEALFTYVAVD-PEGKPRALPV 131 (133)
T ss_pred EEEEEccCceEEEEEEEEEeecccCCCCcEEEEEEEEEEEEEEC-CCCCEEeCCC
Confidence 999999999998878877421 12 34678888899998 5789999885
No 19
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=98.05 E-value=0.00024 Score=62.89 Aligned_cols=113 Identities=13% Similarity=0.078 Sum_probs=89.8
Q ss_pred EEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEE
Q 019267 141 QNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETW 220 (343)
Q Consensus 141 ~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTw 220 (343)
....+-..|++++|.++=..+|.||.+++.-...... .+..--+.=-.+.|.+|++.||.|.+..+
T Consensus 16 ~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~~a--------------~~~vVTasvd~v~F~~Pv~vGd~v~~~a~ 81 (157)
T COG1607 16 LRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAASRHA--------------GGRVVTASVDSVDFKKPVRVGDIVCLYAR 81 (157)
T ss_pred EEEEecCCccCcccccccHHHHHHHHHHHHHHHHHHh--------------CCeEEEEEeceEEEccccccCcEEEEEEE
Confidence 5778899999999999999999999999875554321 12222233357999999999999999999
Q ss_pred EEEeCCcEEEEEEEEEEC--C--CCcEEEEEEEEEEEEecCCCcccCCCHHH
Q 019267 221 VSASGKNGMRRDWLIRNA--K--TGETLTRATSLWVMMNKLTRRLSKMPDEV 268 (343)
Q Consensus 221 v~~~gr~~~~R~f~I~d~--~--~Gevia~A~S~wV~iD~~TRRp~rIPeev 268 (343)
+...||.++...-+++.+ . ..+...+|..++|-+|-+ +||.++|++.
T Consensus 82 v~~~GrTSm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd~~-gkP~~vp~~~ 132 (157)
T COG1607 82 VVYTGRTSMEVGVEVWAEDIRSGERRLATSAYFTFVAVDED-GKPTPVPREE 132 (157)
T ss_pred EeecCcccEEEEEEEEEecccCCcceEeeeEEEEEEEECCC-CCcccCCccC
Confidence 999999999887777643 1 234677888999999966 9999999755
No 20
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=97.75 E-value=0.0012 Score=54.64 Aligned_cols=98 Identities=8% Similarity=-0.078 Sum_probs=80.1
Q ss_pred EEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEE
Q 019267 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (343)
Q Consensus 140 ~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeT 219 (343)
+..+.++...++..|.++=..++.+++.+....... . ...+...+-++++++|.+|++.| .|+++.
T Consensus 19 ~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~-~------------~~~~~~~vt~~l~i~f~~p~~~g-~l~a~a 84 (117)
T TIGR00369 19 EATMPVDERTLQPFGSLHGGVSAALADTAGSAAGYL-C------------NSGGQAVVGLELNANHLRPAREG-KVRAIA 84 (117)
T ss_pred EEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHHh-h------------cCCCceEEEEEEEeeeccccCCC-EEEEEE
Confidence 567888999999999999999999988887332221 1 12234456779999999999999 999999
Q ss_pred EEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 220 WVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 220 wv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
++.+.|+.....+-+++|+ +|+++++++.++.
T Consensus 85 ~v~~~gr~~~~~~~~i~~~-~g~~va~~~~t~~ 116 (117)
T TIGR00369 85 QVVHLGRQTGVAEIEIVDE-QGRLCALSRGTTA 116 (117)
T ss_pred EEEecCceEEEEEEEEECC-CCCEEEEEEEEEc
Confidence 9999999888888899996 8999999998764
No 21
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=97.70 E-value=1.6e-05 Score=64.68 Aligned_cols=27 Identities=7% Similarity=-0.204 Sum_probs=25.2
Q ss_pred ceeeecCCccccCchhHHHHHHHhhcc
Q 019267 305 LTVSEIFFLMVIVIFLLLYCDISCSFL 331 (343)
Q Consensus 305 ~~vR~SDID~NgHVNNa~Yid~~~d~l 331 (343)
++||++|+|.||||||+.|++|+.|..
T Consensus 2 ~~V~~~d~D~~G~v~~~~y~~~~~~a~ 28 (117)
T TIGR00051 2 VRVYYEDTDAQGIVYHANYLRYCERAR 28 (117)
T ss_pred EEEEEeccCCCcEEEehHHHHHHHHHH
Confidence 589999999999999999999999873
No 22
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=97.66 E-value=0.00017 Score=67.22 Aligned_cols=89 Identities=9% Similarity=0.006 Sum_probs=68.4
Q ss_pred eeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEE
Q 019267 137 FIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVN 216 (343)
Q Consensus 137 ~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~ 216 (343)
..+...|.||++|+|.+|||||+.|.+|+.|.-..++..+- --.++.++|.+|...||+|+
T Consensus 151 ~s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~~~~-------------------~p~r~~l~y~keva~G~~it 211 (250)
T COG3884 151 ASEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFLKLY-------------------GPLRLTLEYVKEVAPGEKIT 211 (250)
T ss_pred ccccccceeEEEeeccccccccceehHHHHHHHhhhhHhhc-------------------ccceeEEEEEcccCCCCeEE
Confidence 35667999999999999999999999999998775554321 13589999999999999999
Q ss_pred EEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEE
Q 019267 217 VETWVSASGKNGMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 217 VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
|.+.+...+..- .|.. +|.+.+-+..+|
T Consensus 212 i~~e~~~~~s~~-----~f~~--d~~v~~lt~i~~ 239 (250)
T COG3884 212 IVYEVHPLESKH-----QFTS--DGQVNALTYIVG 239 (250)
T ss_pred EEEEEcccCcee-----eecC--CcceEEEEEEEe
Confidence 999988765431 2222 566666666655
No 23
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=97.56 E-value=2.6e-05 Score=67.15 Aligned_cols=29 Identities=7% Similarity=-0.325 Sum_probs=25.8
Q ss_pred eccceeeecCCccccCchhHHHHHHHhhc
Q 019267 302 RRGLTVSEIFFLMVIVIFLLLYCDISCSF 330 (343)
Q Consensus 302 ~~~~~vR~SDID~NgHVNNa~Yid~~~d~ 330 (343)
...++|||.|+|.+|||||++|+.|..+.
T Consensus 7 ~~~~~V~~~d~D~~GhV~~a~Yl~~fE~a 35 (137)
T COG0824 7 STPIRVRYEDTDAMGHVNNANYLVFFEEA 35 (137)
T ss_pred EEEEEEEhhhcCcccEEecchHHHHHHHH
Confidence 34579999999999999999999998765
No 24
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=97.54 E-value=3.4e-05 Score=63.97 Aligned_cols=27 Identities=11% Similarity=-0.191 Sum_probs=24.5
Q ss_pred cceeeecCCccccCchhHHHHHHHhhc
Q 019267 304 GLTVSEIFFLMVIVIFLLLYCDISCSF 330 (343)
Q Consensus 304 ~~~vR~SDID~NgHVNNa~Yid~~~d~ 330 (343)
.++||++|+|.+|||||++|+.|+.+.
T Consensus 4 ~~~vr~~d~D~~Ghv~~~~y~~~~~~a 30 (126)
T TIGR02799 4 PIRVYYEDTDAGGVVYHANYLKFMERA 30 (126)
T ss_pred eEEEEEeccCCCceEEechHHHHHHHH
Confidence 368999999999999999999999754
No 25
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=97.53 E-value=3.9e-05 Score=64.51 Aligned_cols=28 Identities=11% Similarity=-0.209 Sum_probs=25.7
Q ss_pred cceeeecCCccccCchhHHHHHHHhhcc
Q 019267 304 GLTVSEIFFLMVIVIFLLLYCDISCSFL 331 (343)
Q Consensus 304 ~~~vR~SDID~NgHVNNa~Yid~~~d~l 331 (343)
.++||++|+|.+|||||.+|++|+.+..
T Consensus 6 ~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~ 33 (130)
T PRK10800 6 PVRVYYEDTDAGGVVYHASYVAFYERAR 33 (130)
T ss_pred EEEEeehhcCCCCeEehHHHHHHHHHHH
Confidence 4799999999999999999999999863
No 26
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=97.50 E-value=0.0046 Score=50.94 Aligned_cols=97 Identities=14% Similarity=0.033 Sum_probs=78.4
Q ss_pred EEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEE
Q 019267 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (343)
Q Consensus 140 ~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeT 219 (343)
.-.+.++-..++..|.++=..++.+++.+....+... +..-+....+++|.+|.+.||.|.++.
T Consensus 17 ~~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~~~~----------------~~~~~t~~~~i~f~rp~~~G~~l~~~a 80 (114)
T TIGR02286 17 RVAMTVRADMLNGHGTAHGGFLFSLADSAFAYACNSY----------------GDAAVAAQCTIDFLRPGRAGERLEAEA 80 (114)
T ss_pred EEEEECCHHHcCcCCCchHHHHHHHHHHHHHHHhcCC----------------CCceEEEEEEEEEecCCCCCCEEEEEE
Confidence 3478888889999999999999999998864332111 111245788999999999999999999
Q ss_pred EEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019267 220 WVSASGKNGMRRDWLIRNAKTGETLTRATSLWVM 253 (343)
Q Consensus 220 wv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~ 253 (343)
++.+.++.....+-+++++ +|++++.++.+|-.
T Consensus 81 ~v~~~g~~~~~~~~~i~~~-~~~~va~~~~t~~~ 113 (114)
T TIGR02286 81 VEVSRGGRTGTYDVEVVNQ-EGELVALFRGTSRR 113 (114)
T ss_pred EEEEeCCcEEEEEEEEEcC-CCCEEEEEEEEEEE
Confidence 9999988877777889985 89999999998854
No 27
>PLN02647 acyl-CoA thioesterase
Probab=97.46 E-value=0.0019 Score=65.93 Aligned_cols=118 Identities=14% Similarity=0.108 Sum_probs=88.3
Q ss_pred EEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEE-eEEEEcccCCCCCEEEEEEE
Q 019267 142 NFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTR-MQVVVDRYPTWNDVVNVETW 220 (343)
Q Consensus 142 ~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r-~~Iey~r~p~~gD~V~VeTw 220 (343)
+..++-.+++..|+++.+.+|.+|.++|.--+....-..+ .....+..|-+. -+|+|.+|++.||.|.+...
T Consensus 97 d~~l~~~y~N~~G~l~gG~LLe~mD~~A~~~A~rh~~~~~-------~~~~p~~vVTAsVD~i~F~~Pi~~g~~v~l~g~ 169 (437)
T PLN02647 97 DFILREQYRNPWNEVRIGKLLEDLDALAGTISVKHCSDDD-------STTRPLLLVTASVDKIVLKKPIRVDVDLKIVGA 169 (437)
T ss_pred chhhchhhcCCCCcEeHhHHHHHHHHHHHHHHHHHhCCCc-------ccCCcceEEEEEECcEEEcCCCcCCcEEEEEEE
Confidence 3367777899999999999999999988765554321101 011122233222 47899999999999999999
Q ss_pred EEEeCCcEEEEEEEEEECC------CCcEEEEEEEEEEEEecCCCcccCCCH
Q 019267 221 VSASGKNGMRRDWLIRNAK------TGETLTRATSLWVMMNKLTRRLSKMPD 266 (343)
Q Consensus 221 v~~~gr~~~~R~f~I~d~~------~Gevia~A~S~wV~iD~~TRRp~rIPe 266 (343)
|...|+.++...-+++.+. ....+++|..++|.+|-+++||+++|+
T Consensus 170 Vt~vGrSSMEV~v~V~~~~~~~~~~~~~~~~~a~FtfVA~D~~~gkp~pVp~ 221 (437)
T PLN02647 170 VTWVGRSSMEIQLEVIQPTKDESNTSDSVALTANFTFVARDSKTGKSAPVNR 221 (437)
T ss_pred EEEecCCeEEEEEEEEEccccCCCCcEEEEEEEEEEEEEEcCCCCCeeeCCC
Confidence 9999999998877777531 124788999999999987899988863
No 28
>PRK10293 acyl-CoA esterase; Provisional
Probab=97.06 E-value=0.031 Score=48.16 Aligned_cols=100 Identities=8% Similarity=-0.120 Sum_probs=81.2
Q ss_pred EEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEE
Q 019267 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (343)
Q Consensus 140 ~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeT 219 (343)
+-++.|+-..+.+.|.++=..++.+++.++....... ...+...+-.+++++|.+|.+-| .|..+-
T Consensus 37 ~~~~~v~~~~~n~~G~lHGGv~~tLaD~a~~~a~~~~-------------~~~~~~~vTiel~infl~p~~~g-~l~a~a 102 (136)
T PRK10293 37 EATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLC-------------TEGEQKVVGLEINANHVRSAREG-RVRGVC 102 (136)
T ss_pred EEEEEcCHHHcCCcCcccHHHHHHHHHHHHHHHHHhc-------------ccCCceEEEEEEEeEEecccCCc-eEEEEE
Confidence 4577888888999999999999999987654332211 12344567889999999999887 699999
Q ss_pred EEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019267 220 WVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 220 wv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~i 254 (343)
++.+.||..+..+-+++|+ +|++++.++.++.++
T Consensus 103 ~vv~~Gr~~~~~~~~v~d~-~g~l~A~~~~t~~i~ 136 (136)
T PRK10293 103 KPLHLGSRHQVWQIEIFDE-KGRLCCSSRLTTAIL 136 (136)
T ss_pred EEEecCCCEEEEEEEEEeC-CCCEEEEEEEEEEEC
Confidence 9999999988888999996 899999999998763
No 29
>COG5496 Predicted thioesterase [General function prediction only]
Probab=96.91 E-value=0.052 Score=46.39 Aligned_cols=110 Identities=10% Similarity=0.116 Sum_probs=85.3
Q ss_pred cCCeeEEEEEEeecCCCCCC-------CCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEc
Q 019267 134 QDGFIFRQNFSIRSYEIGAD-------GTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVD 206 (343)
Q Consensus 134 ~~g~vf~~~~~VR~~D~D~~-------GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~ 206 (343)
.+++.++.++.|+-.+++.- ..+.-+.++-||++++.+.+.. +| +.|.+-|-++..++-.
T Consensus 2 ~~g~~~e~~~lv~dn~t~~~~~~~~~~~VlATp~mi~~~E~a~~el~~~------------~L-d~g~ttVG~ev~vrHl 68 (130)
T COG5496 2 MDGLTLEGEFLVRDNHTVPPAEGSGMLNVLATPAMIGFMENASYELLQP------------YL-DNGETTVGTEVLVRHL 68 (130)
T ss_pred CCceeeEEEEEecccccCchhHhCCccceeehHHHHHHHHHHHHHHHHh------------hC-cCCcceeeEEEEeeec
Confidence 46788999999998888831 2344567888999999877653 12 4577889999999999
Q ss_pred ccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEecCC
Q 019267 207 RYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLT 258 (343)
Q Consensus 207 r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~T 258 (343)
.+.--|.+|+|.+.+.++.+.....+-+.. .+|+.+.+++-+-+.+|.++
T Consensus 69 a~~~~G~~V~i~~~l~~v~Gr~v~f~i~a~--~~~~~Ig~g~h~R~iv~~~k 118 (130)
T COG5496 69 AATPPGLTVTIGARLEKVEGRKVKFRIIAM--EGGDKIGEGTHTRVIVPREK 118 (130)
T ss_pred cCCCCCCeEEEEEEEEEEeccEEEEEEEEe--eCCcEEeeeEEEEEEecHHH
Confidence 999999999999999998665554333333 38999999999999998653
No 30
>PRK10254 thioesterase; Provisional
Probab=96.74 E-value=0.11 Score=44.89 Aligned_cols=100 Identities=7% Similarity=-0.054 Sum_probs=82.1
Q ss_pred EEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEE
Q 019267 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (343)
Q Consensus 140 ~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeT 219 (343)
+-++.++...+.+.|.++=..++.+++.++....... ...+...+-++++++|.||.+-| .|..+-
T Consensus 37 ~~~l~v~~~~~n~~G~vHGGv~~tLaD~a~g~A~~~~-------------~~~g~~~vTiel~in~Lrp~~~g-~l~a~a 102 (137)
T PRK10254 37 EAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFLM-------------TRDGQCVVGTELNATHHRPVSEG-KVRGVC 102 (137)
T ss_pred EEEEEcCccccCCCCcchHHHHHHHHHHHHHHHHHhh-------------CCCCCeEEEEEEEeEEeccCcCC-eEEEEE
Confidence 4577778888999999999999999988765444321 12355678899999999999877 799999
Q ss_pred EEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019267 220 WVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 220 wv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~i 254 (343)
.+.+.||.....+-+|+|+ +|++++.++.+..++
T Consensus 103 ~vi~~Gr~~~v~~~~v~d~-~g~l~a~~~~t~~i~ 136 (137)
T PRK10254 103 QPLHLGRQNQSWEIVVFDE-QGRRCCTCRLGTAVL 136 (137)
T ss_pred EEEecCcCEEEEEEEEEcC-CCCEEEEEEEEEEEe
Confidence 9999999988888999996 899999999887654
No 31
>PRK11688 hypothetical protein; Provisional
Probab=96.69 E-value=0.072 Score=46.49 Aligned_cols=111 Identities=11% Similarity=0.080 Sum_probs=78.0
Q ss_pred EEEEEeecCCCC--CCCCcCHHHHHHHHHHHHHHHHHHcCCC-ccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEE
Q 019267 140 RQNFSIRSYEIG--ADGTASIETLMNHLQETALNHVMTAGLL-DAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVN 216 (343)
Q Consensus 140 ~~~~~VR~~D~D--~~GhV~~~~yl~~lqeAa~~h~~~lGl~-~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~ 216 (343)
...++++-..++ +.|.++=..++.+++.+....+...... ..+.. ...........+-++++++|.+|.+ |+.|.
T Consensus 40 ~~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~~~~~~~~~~-~~~~~~~~~~~vTi~l~i~fl~p~~-g~~l~ 117 (154)
T PRK11688 40 ELSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVGGILARHEDIS-EEELRQRLSRLGTIDLRVDYLRPGR-GERFT 117 (154)
T ss_pred EEEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhhccccccccc-ccccccccccceEEEEEEEeeccCC-CCeEE
Confidence 346677777785 5799999999999888876554432110 00000 0000011122356799999999996 99999
Q ss_pred EEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019267 217 VETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVM 253 (343)
Q Consensus 217 VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~ 253 (343)
++-++.+.|+..+..+-+|++. +|+++++++.+|..
T Consensus 118 a~a~v~~~g~r~~~~~~~i~~~-~g~lvA~a~~t~~v 153 (154)
T PRK11688 118 ATSSVLRAGNKVAVARMELHNE-QGVHIASGTATYLV 153 (154)
T ss_pred EEEEEEEccCCEEEEEEEEECC-CCCEEEEEEEEEEe
Confidence 9999999998887777899986 89999999998863
No 32
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=96.60 E-value=0.00091 Score=52.35 Aligned_cols=29 Identities=7% Similarity=-0.413 Sum_probs=26.9
Q ss_pred cceeeecCCccccCchhHHHHHHHhhccc
Q 019267 304 GLTVSEIFFLMVIVIFLLLYCDISCSFLF 332 (343)
Q Consensus 304 ~~~vR~SDID~NgHVNNa~Yid~~~d~l~ 332 (343)
.+.++++|+|.||||||..|++|+.|...
T Consensus 4 ~~~v~~~d~d~~g~~~~~~~~~~~~~~~~ 32 (110)
T cd00586 4 EIRVRFGDTDAAGHVNNARYLRYFEEARE 32 (110)
T ss_pred EEEEEEhhcCCCCEEchhHHHHHHHHHHH
Confidence 36899999999999999999999999876
No 33
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.39 E-value=0.17 Score=43.35 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=84.7
Q ss_pred EEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEE
Q 019267 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (343)
Q Consensus 139 f~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~Ve 218 (343)
-+..+.+.-....+.|.++=..++..++.+.........- ....-+-+.++++|.||.+-|+ |..+
T Consensus 36 ~~~~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~~~~-------------~~~~~~ti~l~i~flr~~~~g~-v~a~ 101 (141)
T COG2050 36 AEATLPVDPELLNPGGILHGGVIAALADSAAGLAANSLLG-------------VVALAVTLELNINFLRPVKEGD-VTAE 101 (141)
T ss_pred EEEEeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhhccC-------------ccceeEEEEEEehhccCCCCCe-EEEE
Confidence 3457777778888999999999999999998776665421 1112267799999999999999 9999
Q ss_pred EEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEec
Q 019267 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNK 256 (343)
Q Consensus 219 Twv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~ 256 (343)
-.+.+.|+.-...+.++++.+.|+++++++.++..++.
T Consensus 102 a~v~~~G~~~~v~~i~v~~~~~~~lva~~~~t~~v~~~ 139 (141)
T COG2050 102 ARVLHLGRRVAVVEIEVKNDEGGRLVAKGTGTYAVLRK 139 (141)
T ss_pred EEEEeeCCEEEEEEEEEEECCCCeEEEEEEEEEEEecC
Confidence 99999999988888899964466999999999998764
No 34
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=96.35 E-value=0.055 Score=44.50 Aligned_cols=57 Identities=12% Similarity=0.044 Sum_probs=46.8
Q ss_pred ceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCC--cEEEEEEEEEECCCCcEEEEEEEEE
Q 019267 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK--NGMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 194 ~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr--~~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
.+.+....+++|.+|...||+|.++.++.+... ........+.+. +|+++++++.+.
T Consensus 68 ~~~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~~~~v~~~~~~~~~-~g~~v~~g~~~~ 126 (128)
T cd03449 68 PGTIYLSQSLRFLRPVFIGDTVTATVTVTEKREDKKRVTLETVCTNQ-NGEVVIEGEAVV 126 (128)
T ss_pred ceEEEEEEEEEECCCccCCCEEEEEEEEEEEecCCCEEEEEEEEEeC-CCCEEEEEEEEE
Confidence 356677899999999999999999999998754 455666778885 799999998754
No 35
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=96.29 E-value=0.065 Score=46.97 Aligned_cols=100 Identities=11% Similarity=0.031 Sum_probs=82.7
Q ss_pred EEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEE
Q 019267 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (343)
Q Consensus 140 ~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeT 219 (343)
+-+++|....++.++.++-...+.+.+..+..-+... .....-|-+.++|.|..+...||.|+|+.
T Consensus 40 ~ce~kV~~~~~N~~k~LHGG~tAtLvD~i~s~~~~~~--------------~~~~~gvsvdLsvsyL~~AklGe~l~i~a 105 (148)
T KOG3328|consen 40 SCELKVTPDHLNRFKTLHGGATATLVDLITSAALLMT--------------SGFKPGVSVDLSVSYLSSAKLGEELEIEA 105 (148)
T ss_pred EEEEEeCHHHcCccccccccchhhHHHHHhhHHHHhc--------------cCCCCceEEEEEhhhccccCCCCeEEEEE
Confidence 4599999999999999999999988888876533222 22234577899999999999999999999
Q ss_pred EEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019267 220 WVSASGKNGMRRDWLIRNAKTGETLTRATSLWVM 253 (343)
Q Consensus 220 wv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~ 253 (343)
.+.+.|+.....+.+++...+|++++.++-+-.+
T Consensus 106 ~~vr~Gk~la~t~v~l~~K~t~kiia~grhtk~~ 139 (148)
T KOG3328|consen 106 TVVRVGKTLAFTDVELRRKSTGKIIAKGRHTKYF 139 (148)
T ss_pred EEeecCceEEEEEEEEEEcCCCeEEEecceEEEe
Confidence 9999999988888888887789999988765544
No 36
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=95.90 E-value=0.0036 Score=56.69 Aligned_cols=103 Identities=12% Similarity=-0.018 Sum_probs=82.2
Q ss_pred ecCCCCCCC-CcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEEEEEe
Q 019267 146 RSYEIGADG-TASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS 224 (343)
Q Consensus 146 R~~D~D~~G-hV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~ 224 (343)
-..|+|-.- |+||+.|++-+.-||.+|....|+. ..+...+...|..-..+.|.|.++.-++..|.|.+...
T Consensus 58 ls~dlDtll~HmnNArYfrElDfAR~~~~~r~~l~-------~~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRiI~W 130 (213)
T KOG4366|consen 58 LSTDLDTLLSHMNNARYFRELDFARVNFYCRTGLY-------LMLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRIICW 130 (213)
T ss_pred ecchHHHHHHHhhhhHHHHHhhHHHHHHHHHHhHH-------HHHHhcCCCeeechhhhhhhhhcCCCCccceeeEEEEE
Confidence 346667555 9999999999999999999998861 34556666777777888899999999999999999988
Q ss_pred CCcEEEEEEEEEECCCCcEEEEEEEEEEEEe
Q 019267 225 GKNGMRRDWLIRNAKTGETLTRATSLWVMMN 255 (343)
Q Consensus 225 gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD 255 (343)
....++.+.++...++|=+++-+.+..++.|
T Consensus 131 Dekaiyle~rFv~~sd~fvcala~~kq~l~d 161 (213)
T KOG4366|consen 131 DEKAIYLESRFVILSDGFVCALALTKQVLKD 161 (213)
T ss_pred chhhhhhhhheeeccCceEeehHHHHHHHhc
Confidence 6555544444444448999999999999988
No 37
>PLN02322 acyl-CoA thioesterase
Probab=95.83 E-value=0.58 Score=41.38 Aligned_cols=102 Identities=6% Similarity=-0.122 Sum_probs=79.0
Q ss_pred EEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEE
Q 019267 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (343)
Q Consensus 140 ~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeT 219 (343)
+-+..|+...+++.|.++=..++.+++.+.. +..... ..+...+-+++.++|.+|.+.||.|..+-
T Consensus 29 ~~~m~v~~~~~N~~G~vHGGv~atLaDta~g-~A~~~~-------------~~~~~~vTiel~infLrpa~~G~~L~Aea 94 (154)
T PLN02322 29 TGRLPVSPMCCQPFKVLHGGVSALIAESLAS-LGAHMA-------------SGFKRVAGIQLSINHLKSADLGDLVFAEA 94 (154)
T ss_pred EEEEECCHHHcCCCCCccHHHHHHHHHHHHH-HHHhhc-------------cCCCceEEEEEEEEEeccCCCCCEEEEEE
Confidence 4577788888999999999999999986654 221110 11234577899999999999999999999
Q ss_pred EEEEeCCcEEEEEEEEEECC-----CCcEEEEEEEEEEEEe
Q 019267 220 WVSASGKNGMRRDWLIRNAK-----TGETLTRATSLWVMMN 255 (343)
Q Consensus 220 wv~~~gr~~~~R~f~I~d~~-----~Gevia~A~S~wV~iD 255 (343)
.+.+.|+.....+-+|++.. +|++++.++.+..++.
T Consensus 95 ~vv~~Gr~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~~ 135 (154)
T PLN02322 95 TPVSTGKTIQVWEVKLWKTTDKDKANKILISSSRVTLICNL 135 (154)
T ss_pred EEEecCCCEEEEEEEEEECCCCcccCCeEEEEEEEEEEEcc
Confidence 99999998888888998831 2688999988876554
No 38
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=95.25 E-value=0.0074 Score=62.49 Aligned_cols=27 Identities=7% Similarity=-0.139 Sum_probs=25.3
Q ss_pred cceeeecCCccccCchhHHHHHHHhhc
Q 019267 304 GLTVSEIFFLMVIVIFLLLYCDISCSF 330 (343)
Q Consensus 304 ~~~vR~SDID~NgHVNNa~Yid~~~d~ 330 (343)
.++|++.|+|.||||||++|+.|+.|.
T Consensus 349 ~~~V~~~~~D~~Ghvnn~~Yl~~~e~A 375 (495)
T PRK07531 349 ETKVPPAWVDYNGHMTEHRYLQVFGDT 375 (495)
T ss_pred eEEECHHHcCCCCeEcHHHHHHHHHHH
Confidence 579999999999999999999999876
No 39
>PLN02647 acyl-CoA thioesterase
Probab=95.21 E-value=0.67 Score=47.61 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=80.7
Q ss_pred EEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEE
Q 019267 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (343)
Q Consensus 139 f~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~Ve 218 (343)
-+..+.+...|.+..|.++=+.+|+++.+++.--.... . .+..-.+.=-.|+|.+|.+.||.|.++
T Consensus 291 ~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~r~-------------a-~~~~vt~svd~v~F~~PV~vGdil~l~ 356 (437)
T PLN02647 291 LENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAYAF-------------A-GLRPYFLEVDHVDFLRPVDVGDFLRFK 356 (437)
T ss_pred eEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHHHH-------------c-CCceEEEEecceEecCccccCcEEEEE
Confidence 44567788999999999999999999999887433321 1 223334455789999999999999986
Q ss_pred EEEEEe-----CCcEEEEEEE--EEEC--CCCcEEEEEEEEEEEEecC-CCcccCCCH
Q 019267 219 TWVSAS-----GKNGMRRDWL--IRNA--KTGETLTRATSLWVMMNKL-TRRLSKMPD 266 (343)
Q Consensus 219 Twv~~~-----gr~~~~R~f~--I~d~--~~Gevia~A~S~wV~iD~~-TRRp~rIPe 266 (343)
..|... ++.++..+-. +.+. .+++++.++..++|..|-. +++|.++|+
T Consensus 357 A~V~yt~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~~~~g~p~~Vp~ 414 (437)
T PLN02647 357 SCVLYTELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPEAAMKNGFKIRN 414 (437)
T ss_pred EEEEEEeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEeccccCCCCccCCe
Confidence 655544 4455543333 3332 2456788999999998863 678888875
No 40
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=95.13 E-value=0.54 Score=38.84 Aligned_cols=81 Identities=9% Similarity=-0.013 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCC
Q 019267 161 LMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKT 240 (343)
Q Consensus 161 yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~ 240 (343)
.+.++.+++..+....+. . ......+.+.-.+++|.+|+..||++++++++...+........+++. +
T Consensus 50 ~iE~~aQ~~~~~~~~~~~---------~-~~~~~~~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~~~~~~~~~~~~--~ 117 (131)
T cd01288 50 IIEALAQAAGILGLKSLE---------D-FEGKLVYFAGIDKARFRKPVVPGDQLILEVELLKLRRGIGKFKGKAYV--D 117 (131)
T ss_pred HHHHHHHHHHHHhhhccc---------c-cCCcEEEEeeecccEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEEE--C
Confidence 556677766655432210 0 123345555568999999999999999999999877666666667755 7
Q ss_pred CcEEEEEEEEEEE
Q 019267 241 GETLTRATSLWVM 253 (343)
Q Consensus 241 Gevia~A~S~wV~ 253 (343)
|+++++|+...+.
T Consensus 118 g~~v~~~~~~~~~ 130 (131)
T cd01288 118 GKLVAEAELMFAI 130 (131)
T ss_pred CEEEEEEEEEEEE
Confidence 8999999887764
No 41
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=94.97 E-value=0.19 Score=50.11 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=87.1
Q ss_pred ccccCCeeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCC
Q 019267 131 KIVQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPT 210 (343)
Q Consensus 131 ~~~~~g~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~ 210 (343)
.|.+.+..+...+.|...-++..|.+++..+..++.++....+... .+.-.++-.+.+-|.+|..
T Consensus 325 ~l~e~~~~~~~t~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~k~---------------~~~niiIE~i~iyflk~vq 389 (432)
T COG4109 325 NLSEKGDEYGVTVEVEPQMINSLGTISNGVFTELLTEVVQRVLRKK---------------KKRNIIIENITIYFLKPVQ 389 (432)
T ss_pred hhhhhccccceEEEechhhccccccchHHHHHHHHHHHHHHHHHHh---------------cCCceEEEeeeeeeeccee
Confidence 3455566667778899999999999999999999999998777642 2233577889999999999
Q ss_pred CCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEE
Q 019267 211 WNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 211 ~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
..+.++|...+...||.+...+++|+. +|++++.|-...
T Consensus 390 id~~l~I~prIl~~gR~~a~idvei~~--~~~ivaKAiv~~ 428 (432)
T COG4109 390 IDSVLEIYPRILEEGRKFAKIDVEIYH--DGQIVAKAIVTV 428 (432)
T ss_pred cccEEEEeeeeeccccccceeEEEEee--Ccchhhhheeee
Confidence 999999999999999999999999998 577888775443
No 42
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=94.79 E-value=0.25 Score=41.02 Aligned_cols=55 Identities=15% Similarity=0.102 Sum_probs=43.9
Q ss_pred EEEEEeEEEEcccCCCCCEEEEEEEEEEeCCc-EEEEEEEEEECCCCcEEEEEEEEE
Q 019267 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKN-GMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~-~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
..+.+++++|.+|...||+|+++.++...... ......++.|+ +|+++++++.+.
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~~~v~~~~~~~nq-~G~~v~~g~a~v 122 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTAKRDDEVVTVELWARNS-EGDHVMAGTATV 122 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEeeccCcEEEEEEEEEcC-CCCEEEeEEEEE
Confidence 45567899999999999999999999876432 45566778885 899998888653
No 43
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=94.78 E-value=0.2 Score=39.22 Aligned_cols=57 Identities=12% Similarity=0.064 Sum_probs=50.8
Q ss_pred eEEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 195 IWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 195 ~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
.-+...+++.|.++...++.+..+.++...++....++-++++. +|++++.+.....
T Consensus 42 ~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~-~G~lva~~~~~~~ 98 (99)
T cd00556 42 GFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQR-DGKLVASATQSFL 98 (99)
T ss_pred CeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEECC-CCcEEEEEEEeEc
Confidence 45678999999999999999999999999999999888999985 7999999987653
No 44
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=94.51 E-value=0.65 Score=39.50 Aligned_cols=99 Identities=14% Similarity=0.120 Sum_probs=65.8
Q ss_pred eEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEE
Q 019267 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (343)
Q Consensus 138 vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~V 217 (343)
..+..++.++.-.++.|.++-.+++...+-+....+... + ..+..|++..++|+|.+|.+-. |..
T Consensus 30 ~~~v~l~~~~~~~N~~gt~h~gAl~~laE~~~g~~~~~~------------l-~~~~~~~~k~~~i~f~kpa~g~--v~a 94 (132)
T PF14539_consen 30 RVVVRLPLRPRNRNHVGTIHAGALFTLAEPAYGLLLMSN------------L-GDKYRVWDKSAEIDFLKPARGD--VTA 94 (132)
T ss_dssp EEEEEE-S-CCGB-TTSSB-HHHHHHHHHCHHHHHHHHH------------S--TTEEEEEEEEEEEE-S---S---EEE
T ss_pred EEEEEEcCCccccCcCcchHHHHHHHHHHHHHHHHHHHh------------C-CCcEEEEEEeeEEEEEeccCCc--EEE
Confidence 445678888899999999999999999999987666532 1 1267788999999999996643 444
Q ss_pred EEEEEE--eC-CcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 218 ETWVSA--SG-KNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 218 eTwv~~--~g-r~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
+..++. ++ +........++|. +|+++++++.+|-
T Consensus 95 ~~~~~~e~~~~~~~~~~~v~i~D~-~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 95 TAELTEEQIGERGELTVPVEITDA-DGEVVAEATITWY 131 (132)
T ss_dssp EEE-TCCHCCHEEEEEEEEEEEET-TC-EEEEEEEEEE
T ss_pred EEEcCHHHhCCCcEEEEEEEEEEC-CCCEEEEEEEEEE
Confidence 444443 33 4445566778896 9999999999984
No 45
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=94.28 E-value=0.57 Score=41.72 Aligned_cols=61 Identities=11% Similarity=-0.003 Sum_probs=47.0
Q ss_pred EEEEeEEEEcccCCCCCEEEEEEEEEEeC----CcEEEEEEEEEECCCCcEEEEEEEEEEEEecCC
Q 019267 197 VVTRMQVVVDRYPTWNDVVNVETWVSASG----KNGMRRDWLIRNAKTGETLTRATSLWVMMNKLT 258 (343)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~VeTwv~~~g----r~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~T 258 (343)
+-...+++|.+|.+.||+|+++.++.... +-.......+.|+ +|++++++...++.-+.++
T Consensus 85 v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~NQ-~Ge~V~~~~~~~~~~~~~~ 149 (166)
T PRK13691 85 VQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTND-DGELVMEAYTTLMGQQGDN 149 (166)
T ss_pred eeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEECC-CCCEEEEEEEEEEEecCCC
Confidence 43567889999999999999999998762 2245556777885 8999999998777655443
No 46
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=94.12 E-value=3.3 Score=35.34 Aligned_cols=58 Identities=9% Similarity=0.011 Sum_probs=46.0
Q ss_pred EEEEE-eEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEe
Q 019267 196 WVVTR-MQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMN 255 (343)
Q Consensus 196 WVV~r-~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD 255 (343)
.++.. -+++|.+|.+.||+|+++.++...++.....+..+.. +|+++++++...++-|
T Consensus 88 ~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~~~~v~~~~~~~~--~g~~v~~~~~~~~~~~ 146 (147)
T PRK00006 88 VYFAGIDKARFKRPVVPGDQLILEVELLKQRRGIWKFKGVATV--DGKLVAEAELMFAIRD 146 (147)
T ss_pred EEEeeeeEEEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEEE--CCEEEEEEEEEEEEEc
Confidence 34444 4799999999999999999999876665556667764 7999999999887644
No 47
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=93.99 E-value=0.62 Score=37.95 Aligned_cols=56 Identities=16% Similarity=-0.072 Sum_probs=44.7
Q ss_pred ceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCC----cEEEEEEEEEECCCCcEEEEEEEE
Q 019267 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK----NGMRRDWLIRNAKTGETLTRATSL 250 (343)
Q Consensus 194 ~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr----~~~~R~f~I~d~~~Gevia~A~S~ 250 (343)
..+++...+++|.+|.+.||+|+++.++..... ..........+. +|+++..++..
T Consensus 66 ~~~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~~n~-~g~~v~~g~~~ 125 (127)
T cd03441 66 DGANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEARNQ-GGEVVLSGEAT 125 (127)
T ss_pred ccceeEEeEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEEEeC-CCCEEEEEEEE
Confidence 456788999999999999999999999998743 245566777785 78888886653
No 48
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=93.93 E-value=3 Score=35.21 Aligned_cols=87 Identities=10% Similarity=0.033 Sum_probs=56.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEE
Q 019267 156 ASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLI 235 (343)
Q Consensus 156 V~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I 235 (343)
+--.-++.++-+++..++... . + ..-......+.+.=.+++|.++.+.||+++++.++..........+..+
T Consensus 53 ~Pg~l~iE~~aQ~~~~~~~~~-~-----~--~~~~~~~~~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~~~~~~~~~~~~ 124 (140)
T TIGR01750 53 MPGVLIVEALAQAGGVLAILS-L-----G--GEIGKGKLVYFAGIDKAKFRRPVVPGDQLILHAEFLKKRRKIGKFKGEA 124 (140)
T ss_pred ChHHHHHHHHHHHHHHHhecc-c-----c--ccCCCCcEEEEeecceeEECCccCCCCEEEEEEEEEEccCCEEEEEEEE
Confidence 334446677777766554211 0 0 0001112334443369999999999999999999987765555556677
Q ss_pred EECCCCcEEEEEEEEEE
Q 019267 236 RNAKTGETLTRATSLWV 252 (343)
Q Consensus 236 ~d~~~Gevia~A~S~wV 252 (343)
+. +|+++++|+...+
T Consensus 125 ~~--~g~~va~~~~~~~ 139 (140)
T TIGR01750 125 TV--DGKVVAEAEITFA 139 (140)
T ss_pred EE--CCEEEEEEEEEEE
Confidence 54 7999999998765
No 49
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=93.74 E-value=0.88 Score=40.16 Aligned_cols=61 Identities=7% Similarity=0.046 Sum_probs=48.1
Q ss_pred EEEeEEEEcccCCCCCEEEEEEEEEEeC----CcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCC
Q 019267 198 VTRMQVVVDRYPTWNDVVNVETWVSASG----KNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTR 259 (343)
Q Consensus 198 V~r~~Iey~r~p~~gD~V~VeTwv~~~g----r~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TR 259 (343)
-...+++|.+|.+.||+|+++.++.... +-....+..++++ +|+++++++++.+.-..+.+
T Consensus 86 ~~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~Nq-~Ge~V~~~~~~~~~r~~~~~ 150 (159)
T PRK13692 86 QVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTNE-EGDVVQETYTTLAGRAGEDG 150 (159)
T ss_pred eeeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEcC-CCCEEEEEEEEEEEecCCcC
Confidence 3457999999999999999999997542 2345566778885 89999999999888766544
No 50
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=93.73 E-value=0.87 Score=38.46 Aligned_cols=55 Identities=18% Similarity=0.007 Sum_probs=42.9
Q ss_pred EEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEE
Q 019267 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
.+.+++++|.+|...||+|+++.++.+...-....++++++.++|+++.+++.+.
T Consensus 69 ~~~~~~~rf~~PV~~gdtl~~~~~v~~~~~~~~~~~~~~~nq~~g~~V~~g~~~v 123 (126)
T cd03447 69 RVRSFTASFVGMVLPNDELEVRLEHVGMVDGRKVIKVEARNEETGELVLRGEAEV 123 (126)
T ss_pred eEEEEEEEEcccCcCCCEEEEEEEEEEEeCCeEEEEEEEEECCCCCEEEEEEEEE
Confidence 3456799999999999999999999986544456677888862288888887653
No 51
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=93.50 E-value=3 Score=34.15 Aligned_cols=85 Identities=12% Similarity=-0.041 Sum_probs=62.6
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEE
Q 019267 154 GTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDW 233 (343)
Q Consensus 154 GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f 233 (343)
+.+--.-.+.++-+++..++...+.. .. .....+..+.-.+++|.++.+-||+++++.++...+......+.
T Consensus 42 p~lPg~~~iE~~aQ~~~~~~~~~~~~-------~~-~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~~~~~~~~ 113 (131)
T cd00493 42 PVMPGVLGIEAMAQAAAALAGLLGLG-------KG-NPPRLGYLAGVRKVKFRGPVLPGDTLTLEVELLKVRRGLGKFDG 113 (131)
T ss_pred CCCCcHHHHHHHHHHHHHHHHhcccc-------cc-cCCcEEEEEEcceeEECCCcCCCCEEEEEEEEEEeeCCEEEEEE
Confidence 55667778889988888887655421 00 12233455555799999999999999999999987655555667
Q ss_pred EEEECCCCcEEEEEE
Q 019267 234 LIRNAKTGETLTRAT 248 (343)
Q Consensus 234 ~I~d~~~Gevia~A~ 248 (343)
.++. +|+++++++
T Consensus 114 ~~~~--~g~~v~~~~ 126 (131)
T cd00493 114 RAYV--DGKLVAEAE 126 (131)
T ss_pred EEEE--CCEEEEEEE
Confidence 7777 699999988
No 52
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=93.17 E-value=0.81 Score=38.22 Aligned_cols=52 Identities=12% Similarity=0.118 Sum_probs=41.2
Q ss_pred EEEeEEEEcccCCCCCEEEEEEEEEEe----CCcEEEEEEEEEECCCCcEEEEEEEE
Q 019267 198 VTRMQVVVDRYPTWNDVVNVETWVSAS----GKNGMRRDWLIRNAKTGETLTRATSL 250 (343)
Q Consensus 198 V~r~~Iey~r~p~~gD~V~VeTwv~~~----gr~~~~R~f~I~d~~~Gevia~A~S~ 250 (343)
+.++.++|.+|.+.||+|.++.++.+. ++-....+.++.++ +|+++.+++.+
T Consensus 70 i~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~nq-~g~~v~~g~a~ 125 (127)
T cd03453 70 VVSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATDQ-AGGKKVLGRAI 125 (127)
T ss_pred eEEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEEc-CCCEEEEEEEE
Confidence 357889999999999999999999764 22345566788886 89988888764
No 53
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=93.14 E-value=0.56 Score=39.60 Aligned_cols=51 Identities=16% Similarity=-0.001 Sum_probs=41.1
Q ss_pred eEEEEcccCCCCCEEEEEEEEEEeC-------CcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 201 MQVVVDRYPTWNDVVNVETWVSASG-------KNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 201 ~~Iey~r~p~~gD~V~VeTwv~~~g-------r~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
.+++|.+|...||+|.++.++.+.. +-.......+.|+ +|+++++++.+.+
T Consensus 81 ~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq-~g~~v~~~~~~~~ 138 (140)
T cd03454 81 DELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLNQ-RGEVVLTFEATVL 138 (140)
T ss_pred eeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEcC-CCCEEEEEEehhe
Confidence 4899999999999999999998763 1244566778885 8999999887654
No 54
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=93.10 E-value=0.62 Score=39.13 Aligned_cols=51 Identities=14% Similarity=0.061 Sum_probs=40.3
Q ss_pred eEEEEcccCCCCCEEEEEEEEEEeCC------cEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 201 MQVVVDRYPTWNDVVNVETWVSASGK------NGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 201 ~~Iey~r~p~~gD~V~VeTwv~~~gr------~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
.+++|.+|.+.||+|.++.++.+... -.......++++ +|++++++++..+
T Consensus 83 ~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~nq-~g~~v~~~~~~~l 139 (140)
T cd03446 83 DNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVNQ-RGEVVQSGEMSLL 139 (140)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEcC-CCCEEEEEEEeee
Confidence 48999999999999999999987631 134455667775 8999999987754
No 55
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=92.93 E-value=1.3 Score=40.08 Aligned_cols=59 Identities=10% Similarity=-0.065 Sum_probs=46.5
Q ss_pred CceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019267 193 NLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVM 253 (343)
Q Consensus 193 g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~ 253 (343)
+...+....+++|.+|...||+|.++..+...++........+.. +|+++++|....+.
T Consensus 123 ~~~~~~~i~~irF~kPV~pGD~L~~ea~v~~~~~~~~~v~~~~~v--~g~~V~ege~~~~~ 181 (185)
T PRK04424 123 AELALTGVANIRFKRPVKLGERVVAKAEVVRKKGNKYIVEVKSYV--GDELVFRGKFIMYR 181 (185)
T ss_pred CcEEEEEeeeEEEccCCCCCCEEEEEEEEEEccCCEEEEEEEEEE--CCEEEEEEEEEEEE
Confidence 344556668999999999999999999999877655544555554 79999999988765
No 56
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=92.23 E-value=0.86 Score=38.56 Aligned_cols=55 Identities=13% Similarity=-0.021 Sum_probs=41.9
Q ss_pred EEEeEEEEcccCCCCCEEEEEEEEEEeCC-------cEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019267 198 VTRMQVVVDRYPTWNDVVNVETWVSASGK-------NGMRRDWLIRNAKTGETLTRATSLWVM 253 (343)
Q Consensus 198 V~r~~Iey~r~p~~gD~V~VeTwv~~~gr-------~~~~R~f~I~d~~~Gevia~A~S~wV~ 253 (343)
+.-.+++|.+|.+.||+|+++.++..... ........+.+. +|+++++++.+.++
T Consensus 81 ~~~~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq-~g~~V~~~~~~~~~ 142 (146)
T cd03451 81 LGYDEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYNQ-DGEPVLSFERTALV 142 (146)
T ss_pred cCccEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEECC-CCCEEEEEEehhEE
Confidence 33348999999999999999999987632 244455667765 89999999876543
No 57
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=92.10 E-value=7 Score=33.45 Aligned_cols=100 Identities=14% Similarity=0.077 Sum_probs=67.9
Q ss_pred EEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEE
Q 019267 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (343)
Q Consensus 140 ~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeT 219 (343)
+.+..++. +.+..|.++=..++..+..+.+...... + ... ..+..-|..+.+|+|.+|.+- + +..+.
T Consensus 25 ~v~~pl~~-n~N~~G~~hGG~l~tlad~a~~~~~~~~-~--------~~~-~~~~~~vt~~~~i~yl~P~~~-~-~~a~~ 91 (138)
T TIGR02447 25 RLSAPLAA-NINHHGTMFGGSLYTLATLSGWGLLWLR-L--------QEL-GIDGDIVIADSHIRYLAPVTG-D-PVANC 91 (138)
T ss_pred EEEeECCC-CcCCCCceehhHHHHHHHHHHHHHHHHH-H--------HHh-CCCCcEEEEEeeeEEcCCcCC-C-eEEEE
Confidence 34666776 4899999999999999965544322110 0 011 112345778999999999975 3 55554
Q ss_pred EE-------------EEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019267 220 WV-------------SASGKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 220 wv-------------~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~i 254 (343)
.+ .+-||..+..+-+|++ +|+++++++.+++.+
T Consensus 92 ~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~--~~~lvA~~~g~~~~~ 137 (138)
T TIGR02447 92 EAPDLESWEAFLATLQRGGKARVKLEAQISS--DGKLAATFSGEYVAL 137 (138)
T ss_pred EcCCHHHHHHHHHHHHhCCceEEEEEEEEEE--CCEEEEEEEEEEEEe
Confidence 44 3446666667788886 689999999998875
No 58
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=90.22 E-value=1.5 Score=36.48 Aligned_cols=52 Identities=13% Similarity=0.036 Sum_probs=37.8
Q ss_pred ceEEEEEeEEEEcccCCCCCEEEEEEEEEEeC-C-----c-EEEEEEEEEECCCCcEEEE
Q 019267 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASG-K-----N-GMRRDWLIRNAKTGETLTR 246 (343)
Q Consensus 194 ~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~g-r-----~-~~~R~f~I~d~~~Gevia~ 246 (343)
..-+-....++|++|++.||+|++++.+..+. | . ....+.+++|. +|+++++
T Consensus 73 ~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~~-~Ge~v~t 131 (132)
T PF13452_consen 73 TRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTDQ-DGELVAT 131 (132)
T ss_dssp GGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE-C-TTEEEEE
T ss_pred hhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEECC-CCCEEEe
Confidence 34566789999999999999999999998852 1 2 23456778886 8999875
No 59
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=89.91 E-value=2.4 Score=39.18 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=47.8
Q ss_pred EEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEe
Q 019267 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMN 255 (343)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD 255 (343)
..+..++++|.++...+ .+++++...+.||.+..+.-+++. +|+++++|...+.--+
T Consensus 34 ~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~q--~~~~~~~a~~~f~~~~ 90 (255)
T PF13622_consen 34 FDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELSQ--DGKVVATATASFGRPE 90 (255)
T ss_dssp SEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEEE--TTEEEEEEEEEEE--T
T ss_pred CceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEEE--CCcCEEEEEEEEccCc
Confidence 67899999999999999 999999999999999999889987 6888988888766554
No 60
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=89.85 E-value=3.3 Score=33.13 Aligned_cols=53 Identities=15% Similarity=0.073 Sum_probs=46.8
Q ss_pred EEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEE
Q 019267 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
.+...++.|.+|+..+..|++++.+..-||.+..|.-.... +|+++..+...+
T Consensus 40 ~~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~Q--~g~~~~~a~~sf 92 (94)
T cd03445 40 VPHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAVQ--NGKVIFTATASF 92 (94)
T ss_pred CeEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEEE--CCEEEEEEEEEE
Confidence 46789999999999999999999999999999999888876 689888887654
No 61
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=89.45 E-value=3.2 Score=42.83 Aligned_cols=66 Identities=18% Similarity=0.077 Sum_probs=49.9
Q ss_pred eEEEEEeEEEEcccCCCCCEEEEEEEEEEe--CCcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCCcc
Q 019267 195 IWVVTRMQVVVDRYPTWNDVVNVETWVSAS--GKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRL 261 (343)
Q Consensus 195 ~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~--gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp 261 (343)
+.+....+++|.+|.+.||+|+++.++... ++.....+.+++++ +|+++.+++.++++-...-.+|
T Consensus 82 ~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~v~~~~~~~nq-~G~~V~~g~~~~l~~~~~~~~~ 149 (466)
T PRK08190 82 GTIYLGQSLRFRRPVRIGDTLTVTVTVREKDPEKRIVVLDCRCTNQ-DGEVVITGTAEVIAPTEKVRRP 149 (466)
T ss_pred ceEEEEEEEEEeCCcCCCCEEEEEEEEEEEECCCCEEEEEEEEEeC-CCCEEEEEEEEeeccccccccc
Confidence 345567899999999999999999999864 33344556677885 8999999988877655443434
No 62
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=89.29 E-value=2.3 Score=36.38 Aligned_cols=51 Identities=16% Similarity=0.024 Sum_probs=40.5
Q ss_pred eEEEEcccCCCCCEEEEEEEEEEeC--C----cEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 201 MQVVVDRYPTWNDVVNVETWVSASG--K----NGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 201 ~~Iey~r~p~~gD~V~VeTwv~~~g--r----~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
.+++|.+|.+.||+|+++..+.... + -.......+.+. +|+++++++....
T Consensus 81 ~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq-~g~~V~~~~~~~~ 137 (142)
T cd03452 81 ENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTNQ-NGELVASYDILTL 137 (142)
T ss_pred ceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEec-CCCEEEEEEehHe
Confidence 4999999999999999999998762 1 135566777785 8999999886544
No 63
>PLN02864 enoyl-CoA hydratase
Probab=87.66 E-value=3.1 Score=40.76 Aligned_cols=59 Identities=10% Similarity=0.024 Sum_probs=47.0
Q ss_pred EEEEeEEEEcccCCCCCEEEEEEEEEEeCCc----EEEEEEEEEECCCCcEEEEEEEEEEEEe
Q 019267 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKN----GMRRDWLIRNAKTGETLTRATSLWVMMN 255 (343)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~----~~~R~f~I~d~~~Gevia~A~S~wV~iD 255 (343)
|=.+..|+++||+..++++++++++..+... ....+..+.+..+|+++++..++.++-.
T Consensus 95 VHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg 157 (310)
T PLN02864 95 LHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRG 157 (310)
T ss_pred eeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeC
Confidence 4457899999999999999999999987322 2456667777558999999998888765
No 64
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=84.11 E-value=18 Score=30.42 Aligned_cols=102 Identities=16% Similarity=0.064 Sum_probs=62.8
Q ss_pred EEEEEEeecCCCCCCC------CcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCC
Q 019267 139 FRQNFSIRSYEIGADG------TASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWN 212 (343)
Q Consensus 139 f~~~~~VR~~D~D~~G------hV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~g 212 (343)
..-...|...|-=..| .+--.-+++.+.+++..++...+... +.+ ......+...--+++|.++..-|
T Consensus 27 ~~a~~~v~~~~~~f~gHFp~~Pv~PGvl~iE~~aQ~~~~~~~~~~~~~-~~~-----~~~~~~~l~~~~~~kF~~~v~Pg 100 (138)
T PF07977_consen 27 IVARKNVTPDEPFFDGHFPGDPVMPGVLLIEAMAQAAGFLAGYSGLAE-GTG-----EARKVPFLAGIRNVKFRGPVYPG 100 (138)
T ss_dssp EEEEEEE-TTSGGGGCSTTTS--B-HHHHHHHHHHHHHHHHHHHCCSS-SCC-----CCCEEEEEEEEEEEEE-S-B-TT
T ss_pred EEEEEEeCCCCCEEEcCCCCCCCCCeEhHHHHHHHHHHhHhhhccccc-cCC-----CcceEEEeccccEEEECccEeCC
Confidence 3445555544443333 34444567788777777776654310 000 01134566777899999999999
Q ss_pred C-EEEEEEEEEE---eCCcEEEEEEEEEECCCCcEEEEEE
Q 019267 213 D-VVNVETWVSA---SGKNGMRRDWLIRNAKTGETLTRAT 248 (343)
Q Consensus 213 D-~V~VeTwv~~---~gr~~~~R~f~I~d~~~Gevia~A~ 248 (343)
| .++++..+.+ ........+..++- +|+.++++.
T Consensus 101 ~~~l~~~v~i~~~~~~~~~~~~~~~~~~v--dg~~v~~~~ 138 (138)
T PF07977_consen 101 DKTLRIEVEIKKIRRREGGMAIFDGTAYV--DGELVAEAE 138 (138)
T ss_dssp E-EEEEEEEEEEEEEEETTEEEEEEEEEE--TTEEEEEEE
T ss_pred CcEEEEEEEEEEeecccCCEEEEEEEEEE--CCEEEEEEC
Confidence 9 9999999998 55666666777877 799998874
No 65
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=81.51 E-value=32 Score=29.26 Aligned_cols=88 Identities=7% Similarity=-0.112 Sum_probs=59.6
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCC-CCEEEEEEEEEEeCC-cEEEE
Q 019267 154 GTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTW-NDVVNVETWVSASGK-NGMRR 231 (343)
Q Consensus 154 GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~-gD~V~VeTwv~~~gr-~~~~R 231 (343)
+.+--..++.+|-+++..+...... ..-.+...+..+.=-+++|+++..- ||++.++.......+ .....
T Consensus 45 ~~~P~~l~iE~mAQa~a~~~g~~~~--------~~~~~~~~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~~~~~~~ 116 (138)
T cd01289 45 GRLPAWVGIEYMAQAIAAHGGLLAR--------QQGNPPRPGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQGDSGLGVF 116 (138)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHH--------hcCCCCCcEEEEEEEEEEEEcceeCCCCeeEEEeeeeeeCCCcEEEE
Confidence 6788888999999987766521110 0001233556665579999998655 999999998777653 44445
Q ss_pred EEEEEECCCCcEEEEEEEEE
Q 019267 232 DWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 232 ~f~I~d~~~Gevia~A~S~w 251 (343)
+-.++. +|+++++|+...
T Consensus 117 ~~~~~v--~~~~va~a~l~~ 134 (138)
T cd01289 117 ECTIED--QGGVLASGRLNV 134 (138)
T ss_pred EEEEEE--CCEEEEEEEEEE
Confidence 566665 689999997653
No 66
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=81.20 E-value=1.1 Score=36.12 Aligned_cols=29 Identities=10% Similarity=-0.311 Sum_probs=25.7
Q ss_pred ccceeeecCCccccCchhHHHHHHHhhcc
Q 019267 303 RGLTVSEIFFLMVIVIFLLLYCDISCSFL 331 (343)
Q Consensus 303 ~~~~vR~SDID~NgHVNNa~Yid~~~d~l 331 (343)
..+++++.|+|..||||+..|+.|+.+..
T Consensus 10 ~~~~v~~~~~d~~g~v~~g~~~~~~d~a~ 38 (123)
T cd03442 10 TRELVLPEDTNHHGTIFGGWLLEWMDELA 38 (123)
T ss_pred EEEEeCCcccCcCCcEeHHHHHHHHHHHH
Confidence 34799999999999999999999987764
No 67
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=80.80 E-value=0.85 Score=32.63 Aligned_cols=28 Identities=14% Similarity=-0.222 Sum_probs=25.5
Q ss_pred ceeeecCCccccCchhHHHHHHHhhccc
Q 019267 305 LTVSEIFFLMVIVIFLLLYCDISCSFLF 332 (343)
Q Consensus 305 ~~vR~SDID~NgHVNNa~Yid~~~d~l~ 332 (343)
++++..|+|.++|+|+..|+.++.....
T Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 32 (100)
T cd03440 5 LTVTPEDIDGGGIVHGGLLLALADEAAG 32 (100)
T ss_pred EEeCHHHcCcCCccchHHHHHHHHHHHH
Confidence 6889999999999999999999987765
No 68
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=78.64 E-value=9.5 Score=35.83 Aligned_cols=54 Identities=9% Similarity=0.027 Sum_probs=48.1
Q ss_pred EEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
.+..+++.|.+++..+..|++++.+.+-||.+..|.-+++. +|++++++...+.
T Consensus 45 ~~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~Q--~g~~~~~a~asf~ 98 (271)
T TIGR00189 45 IPHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAVQ--HGKTIFTLQASFQ 98 (271)
T ss_pred CcceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEEE--CCEEEEEEEEEcc
Confidence 45689999999999999999999999999999999888877 6899988877665
No 69
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=76.59 E-value=0.71 Score=42.13 Aligned_cols=16 Identities=6% Similarity=-0.110 Sum_probs=15.0
Q ss_pred cCCcccc-CchhHHHHH
Q 019267 310 IFFLMVI-VIFLLLYCD 325 (343)
Q Consensus 310 SDID~Ng-HVNNa~Yid 325 (343)
+|+|..- ||||++|++
T Consensus 60 ~dlDtll~HmnNArYfr 76 (213)
T KOG4366|consen 60 TDLDTLLSHMNNARYFR 76 (213)
T ss_pred chHHHHHHHhhhhHHHH
Confidence 9999998 999999986
No 70
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=74.91 E-value=36 Score=35.44 Aligned_cols=60 Identities=7% Similarity=-0.044 Sum_probs=43.8
Q ss_pred ceEEEEEeEEEEcccCCCCCEEEEEEEEEE-eCCcEEEEEEEEEECCCCcEEEEEEEEEEEEe
Q 019267 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSA-SGKNGMRRDWLIRNAKTGETLTRATSLWVMMN 255 (343)
Q Consensus 194 ~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~-~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD 255 (343)
.++.+.--+++|.+|+..||++++++.+.. ..+.....+..++. +|+++++|+...++.+
T Consensus 401 lg~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~~giv~f~g~~~v--dGelVaeael~~~v~~ 461 (464)
T PRK13188 401 STYFMKIDKVKFRQKVVPGDTLIFKVELLSPIRRGICQMQGKAYV--NGKLVCEAELMAQIVK 461 (464)
T ss_pred eEEEEeccEEEEcCCCCCCCEEEEEEEEEEEecCCEEEEEEEEEE--CCEEEEEEEEEEEEec
Confidence 344443359999999999999999999876 33333344556664 7999999999887653
No 71
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=74.75 E-value=19 Score=31.55 Aligned_cols=59 Identities=12% Similarity=-0.067 Sum_probs=43.1
Q ss_pred eEEEEEeEEEEcccCCCCCEEEEEEEEEEeC--C--cEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019267 195 IWVVTRMQVVVDRYPTWNDVVNVETWVSASG--K--NGMRRDWLIRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 195 ~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~g--r--~~~~R~f~I~d~~~Gevia~A~S~wV~i 254 (343)
+-.+....++|.+|.+.||+|..++++.... + -......+.++. +|+....+...+++.
T Consensus 93 ~~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~~~-~g~~v~~~~~~~~~~ 155 (159)
T COG2030 93 GANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETVNQ-EGELVLTLEATVLVL 155 (159)
T ss_pred eeeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEEcc-CCcEEEEEEEeEeEe
Confidence 4456678999999999999999999998752 1 112223455664 788888888877654
No 72
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=71.56 E-value=28 Score=29.15 Aligned_cols=48 Identities=8% Similarity=0.102 Sum_probs=33.0
Q ss_pred EEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEE
Q 019267 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 248 (343)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~ 248 (343)
-.+..+.++|.+|...||+|.++.|.. ++ ... +++...++|+++.++.
T Consensus 70 ~~~~~~~~rF~~PV~~gDtl~~~~~~~--~~-~v~--~~~~~~~~g~~v~~g~ 117 (122)
T cd03448 70 ARFKAIKVRFSSPVFPGETLRTEMWKE--GN-RVI--FQTKVVERDVVVLSNG 117 (122)
T ss_pred ceeEEEEEEEcCCccCCCEEEEEEEEe--CC-EEE--EEEEEccCCcEEEECC
Confidence 346678999999999999999999854 33 232 4443323677766554
No 73
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=69.40 E-value=24 Score=33.99 Aligned_cols=55 Identities=11% Similarity=0.007 Sum_probs=48.9
Q ss_pred EEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
.++..+++.|.+|...+..|+.++....-||++..|.-..+. +|++++.+...+-
T Consensus 55 ~~~hSlh~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~Q--~g~~if~~~~sF~ 109 (286)
T PRK10526 55 RLVHSFHSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAIQ--NGKPIFYMTASFQ 109 (286)
T ss_pred CCceEEEEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEEE--CCEEEEEEEEEec
Confidence 478899999999999999999999999999999999888877 7899988877654
No 74
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=68.34 E-value=68 Score=28.12 Aligned_cols=62 Identities=16% Similarity=0.147 Sum_probs=47.1
Q ss_pred ceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEec
Q 019267 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNK 256 (343)
Q Consensus 194 ~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~iD~ 256 (343)
+...+.=-+..|+++..-||.+.++......++..+........- +|+++++|+...+.++.
T Consensus 85 ~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~V-dg~~v~~a~~~~~~~~~ 146 (147)
T COG0764 85 LGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVATV-DGKVVAEAELLFAGVEK 146 (147)
T ss_pred EEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEEE-CCEEEEEEEEEEEEeec
Confidence 666777788999999999999999999988874444332233232 79999999998887653
No 75
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=66.99 E-value=74 Score=26.51 Aligned_cols=59 Identities=12% Similarity=0.303 Sum_probs=45.0
Q ss_pred CceEEEEEeEEEEcccCCCCCEEEEEEEEEEeCC-----cEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019267 193 NLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK-----NGMRRDWLIRNAKTGETLTRATSLWVM 253 (343)
Q Consensus 193 g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr-----~~~~R~f~I~d~~~Gevia~A~S~wV~ 253 (343)
+..+++..++++|.++..+.-.+.|+..+..... ..+.....++. +|+++++++..+-|
T Consensus 69 ~~~~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~q--~g~~~a~~~~~~tc 132 (132)
T PF03756_consen 69 DHQFVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRPRGLRFRVTVSQ--GGRVVATASMTFTC 132 (132)
T ss_pred CceEEEEEEEEEEccccccCCCEEEEEEEEeccccCCccceEEEEEEEEE--CCEEEEEEEEEEEC
Confidence 4568999999999999888778888777765322 34555667776 79999999988754
No 76
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=66.99 E-value=13 Score=30.66 Aligned_cols=34 Identities=15% Similarity=-0.004 Sum_probs=27.3
Q ss_pred eEEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcE
Q 019267 195 IWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNG 228 (343)
Q Consensus 195 ~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~ 228 (343)
...+.+.+++|.+|...||+|.++.++.+.....
T Consensus 75 ~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~~~ 108 (122)
T PF01575_consen 75 PARLGRFNVRFRAPVFPGDTLTAEVEVTEKREGK 108 (122)
T ss_dssp CEEEEEEEEEESS--BTTEEEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEeccccCCCEEEEEEEEEEEEEcC
Confidence 5678899999999999999999999999854333
No 77
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=66.78 E-value=39 Score=27.32 Aligned_cols=56 Identities=13% Similarity=-0.028 Sum_probs=44.4
Q ss_pred EEEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
-.-..+.|.|++++...|=+..+.+....+.-+..-+-+|+++ +|+++|.+...-+
T Consensus 48 ~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~~-~G~LvAs~~Q~~l 103 (104)
T cd03444 48 SASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFTR-DGELVASVAQEGL 103 (104)
T ss_pred eEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEECC-CCCEEEEEEEeee
Confidence 3556789999999998888888888888766555556789996 8999998876643
No 78
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=61.94 E-value=1.1e+02 Score=26.70 Aligned_cols=92 Identities=11% Similarity=-0.058 Sum_probs=59.8
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhh-CCceEEEEEeEEEEcccCCCCC-EEEEEEEEEEeCC----c
Q 019267 154 GTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAK-KNLIWVVTRMQVVVDRYPTWND-VVNVETWVSASGK----N 227 (343)
Q Consensus 154 GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~-~g~~WVV~r~~Iey~r~p~~gD-~V~VeTwv~~~gr----~ 227 (343)
..+--.-.++.|-++...++-..+... .-.. ...++...--.++|+++..-|| +++++..+.+.++ .
T Consensus 50 pvmPG~L~iEamaQ~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~ 122 (150)
T cd01287 50 PVMPGSLGLEAMIQLLQFYLIWLGLGT-------GVDNPRFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRP 122 (150)
T ss_pred CcCchHHHHHHHHHHHHHHHhhccccc-------ccCcccceeEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCcc
Confidence 334444566777777665554444210 0001 1234445556899999999999 8999999999863 4
Q ss_pred EEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019267 228 GMRRDWLIRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 228 ~~~R~f~I~d~~~Gevia~A~S~wV~i 254 (343)
...-+-.++- +|+++++++..-|.+
T Consensus 123 ~~~~~~~~~v--dg~~v~~a~~~~~~~ 147 (150)
T cd01287 123 YIIADASLWV--DGLRIYEAKDIAVRL 147 (150)
T ss_pred EEEEEEEEEE--CCEEEEEEEccEEEe
Confidence 4555556665 799999998776654
No 79
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=53.82 E-value=1.4e+02 Score=25.89 Aligned_cols=29 Identities=7% Similarity=-0.274 Sum_probs=24.6
Q ss_pred EEEEEeEEEEcccCCCCCEEEEEEEEEEe
Q 019267 196 WVVTRMQVVVDRYPTWNDVVNVETWVSAS 224 (343)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~VeTwv~~~ 224 (343)
..+...+++|.+|.+.||+|+++..+...
T Consensus 85 ~~~g~~~~rF~~PV~~GDtl~~~~~V~~~ 113 (149)
T cd03450 85 VNYGLDKVRFPAPVPVGSRVRGRFTLLSV 113 (149)
T ss_pred EEeeccEEEeCcceeCCcEEEEEEEEEEE
Confidence 34455689999999999999999998875
No 80
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=53.62 E-value=42 Score=36.35 Aligned_cols=50 Identities=14% Similarity=-0.009 Sum_probs=38.9
Q ss_pred eEEEEcccCCCCCEEEEEEEEEEeC--C---c-EEEEEEEEEECCCCcEEEEEEEEE
Q 019267 201 MQVVVDRYPTWNDVVNVETWVSASG--K---N-GMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 201 ~~Iey~r~p~~gD~V~VeTwv~~~g--r---~-~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
.+++|.+|.+.||+|+++..+.... + . ....+..+.+. +|+++.+++...
T Consensus 604 ~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~nq-~G~~Vl~~~~~~ 659 (663)
T TIGR02278 604 ENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVNQ-NGEPVATYDVLT 659 (663)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEcC-CCCEEEEEEEHH
Confidence 4999999999999999999998652 1 1 34556677785 899988887654
No 81
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=52.79 E-value=47 Score=36.00 Aligned_cols=49 Identities=16% Similarity=0.077 Sum_probs=38.7
Q ss_pred EEEEcccCCCCCEEEEEEEEEEeC--C----cEEEEEEEEEECCCCcEEEEEEEEE
Q 019267 202 QVVVDRYPTWNDVVNVETWVSASG--K----NGMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 202 ~Iey~r~p~~gD~V~VeTwv~~~g--r----~~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
+++|.+|.+.||+|+++..+.... + -....+..+.+. +|+++.++....
T Consensus 617 ~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq-~G~~V~~~~~~~ 671 (675)
T PRK11563 617 NLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTNQ-DGELVATYDILT 671 (675)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEEC-CCCEEEEEEEHH
Confidence 799999999999999999999762 1 234566777885 899988887643
No 82
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=52.27 E-value=1.5e+02 Score=25.32 Aligned_cols=52 Identities=12% Similarity=0.007 Sum_probs=35.5
Q ss_pred EEeEEEEcccCCCC-C----EEEEEEEEEEe--CCcEEEEEEEEEECCCCcEEEEEEEEE
Q 019267 199 TRMQVVVDRYPTWN-D----VVNVETWVSAS--GKNGMRRDWLIRNAKTGETLTRATSLW 251 (343)
Q Consensus 199 ~r~~Iey~r~p~~g-D----~V~VeTwv~~~--gr~~~~R~f~I~d~~~Gevia~A~S~w 251 (343)
.++.++|.+|...| | +++++..+... ++........+.+. +++++++|..+.
T Consensus 81 ~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~ 139 (142)
T PRK13693 81 TEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATTG-GKKIFGRAIASA 139 (142)
T ss_pred EEEEEEecccEECCCCccceEEEEEEEEEEeccCCcEEEEEEEEEEC-CcEEEEEEEEEE
Confidence 47899999999874 3 88888888875 33345555666653 555666666543
No 83
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=51.80 E-value=10 Score=27.86 Aligned_cols=18 Identities=6% Similarity=-0.184 Sum_probs=15.3
Q ss_pred ccCchhHHHHHHHhhccc
Q 019267 315 VIVIFLLLYCDISCSFLF 332 (343)
Q Consensus 315 NgHVNNa~Yid~~~d~l~ 332 (343)
||||||.+|+.|+.+..-
T Consensus 1 ~G~v~~g~~~~~~d~a~~ 18 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAAS 18 (79)
T ss_dssp TSSBCHHHHHHHHHHHHH
T ss_pred CCEEhHHHHHHHHHHHHH
Confidence 799999999999877543
No 84
>PLN02864 enoyl-CoA hydratase
Probab=51.77 E-value=73 Score=31.16 Aligned_cols=51 Identities=8% Similarity=0.042 Sum_probs=35.7
Q ss_pred EEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
.+.+++++|.+|...||+|.++.|.. ++. .. |.+...++|+++.++.....
T Consensus 254 ~~~~~~~rF~~PV~pGdtl~~~~~~~--~~~-v~--~~~~~~~~g~~vl~G~a~~~ 304 (310)
T PLN02864 254 AVKTISGRFLLHVYPGETLVTEMWLE--GLR-VI--YQTKVKERNKAVLSGYVDLR 304 (310)
T ss_pred eEEEEEEEEcCCccCCCEEEEEEEeC--CCE-EE--EEEEEecCCeEEEEEEEEEe
Confidence 45678999999999999999999864 222 22 33332237888888766543
No 85
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=46.60 E-value=2e+02 Score=26.28 Aligned_cols=54 Identities=7% Similarity=0.030 Sum_probs=39.3
Q ss_pred EEEeEEEEcc-cCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 198 VTRMQVVVDR-YPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 198 V~r~~Iey~r-~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
-..+.|.|++ |..-+|=+.++++....+.-.+.-+-+|+|+ +|+++|.+...-+
T Consensus 200 tld~ti~f~~~p~~~~~Wl~~~~~~~~~~~Gr~~~~~~l~d~-~G~lvA~~~Q~~l 254 (255)
T PF13622_consen 200 TLDHTIHFHRLPFDGDEWLLLEARSPRAGNGRALMEGRLWDE-DGRLVASSRQEAL 254 (255)
T ss_dssp EEEEEEEECSHCCTTTS-EEEEEEEEEEETTEEEEEEEEEET-TS-EEEEEEEEEE
T ss_pred cceeEEEEEeCCccCCceEEEEEEEeEeCCCEEEEEEEEECC-CCCEEEEEEEEee
Confidence 6678888755 4445788999998887765556666789997 8999999887654
No 86
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=44.25 E-value=1.6e+02 Score=25.52 Aligned_cols=53 Identities=13% Similarity=0.021 Sum_probs=35.2
Q ss_pred EEEEeEEEEcccCCCCCEEEEEEEEEEe-CCcEEEEEEEEE-ECCCCcEEEEEEEEE
Q 019267 197 VVTRMQVVVDRYPTWNDVVNVETWVSAS-GKNGMRRDWLIR-NAKTGETLTRATSLW 251 (343)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~VeTwv~~~-gr~~~~R~f~I~-d~~~Gevia~A~S~w 251 (343)
|-..+.|=|+||.+..|-+.-++..... +...+ ++=+++ + ++|+++|.+..+.
T Consensus 76 vSlDHs~wFHrpfr~ddWlLY~~~sp~A~~~Rgl-~~G~~f~~-q~G~Lvas~~QEG 130 (131)
T PF02551_consen 76 VSLDHSMWFHRPFRADDWLLYAIESPSASGGRGL-VRGRFFDT-QDGELVASVVQEG 130 (131)
T ss_dssp EEEEEEEEE-S--BTTS-EEEEEEEEEEETTEEE-EEECCEEE-CTTEEEEEEEEEE
T ss_pred EecceeEEEcCCCCCCCCEEEEEEcCccccCccc-ccCceEec-CCCCEEEEEecCC
Confidence 3667888999999999988888776654 44444 345666 5 4899999987654
No 87
>PLN02868 acyl-CoA thioesterase family protein
Probab=43.78 E-value=81 Score=31.79 Aligned_cols=55 Identities=11% Similarity=-0.042 Sum_probs=46.4
Q ss_pred EEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEE
Q 019267 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVM 253 (343)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~ 253 (343)
.+..+++.|.++......|++++...+-||.+..|.-..+. +|++++++...+..
T Consensus 182 ~~~s~~~~Fl~~~~~~~pv~~~V~~lr~Grs~~~r~v~~~Q--~g~~~~~~~~sf~~ 236 (413)
T PLN02868 182 LVHSLHAYFLLVGDINLPIIYQVERIRDGHNFATRRVDAIQ--KGKVIFTLFASFQK 236 (413)
T ss_pred CceEeeeeecCCCCCCCCEEEEEEEEcCCCceEeeEEEEEE--CCeeEEEEeecccc
Confidence 46789999999998888899999999999999999888876 68888877765443
No 88
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=43.43 E-value=1.5e+02 Score=27.77 Aligned_cols=55 Identities=7% Similarity=-0.097 Sum_probs=40.8
Q ss_pred EEEEeEEEEcccCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 019267 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (343)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~wV 252 (343)
.-..+.|.|+++...+|=+..+++....+.-...-+-+|+|. +|+++|.+...-+
T Consensus 215 aSldhtv~fh~~~~~~~W~l~~~~s~~~~~Grg~~~~~l~d~-~G~lvAs~~Qe~l 269 (271)
T TIGR00189 215 ASLDHSIWFHRPFRADDWLLYKCSSPSASGSRGLVEGKIFTR-DGVLIASTVQEGL 269 (271)
T ss_pred EeeeeeEEEeCCCCCCeeEEEEEEeccccCCceEEEEEEECC-CCCEEEEEEeeee
Confidence 456788999998788898888888776543333334588996 9999999877654
No 89
>PRK05174 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Validated
Probab=33.34 E-value=3.5e+02 Score=24.11 Aligned_cols=81 Identities=12% Similarity=-0.157 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCE-EEEEEEEEEeC---CcEEEEEEE
Q 019267 159 ETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDV-VNVETWVSASG---KNGMRRDWL 234 (343)
Q Consensus 159 ~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~-V~VeTwv~~~g---r~~~~R~f~ 234 (343)
.-.++.|-++...++...+ ..+.+..+.--+.+|+++..-+|+ +++++.+.... +.....+-.
T Consensus 81 ~L~iEamAQ~~~~~~~~~~-------------~~~~g~l~g~~~~kfr~~v~Pgd~~l~l~v~i~~~~~~~~~~~~~~~~ 147 (172)
T PRK05174 81 CLGLDAMWQLVGFYLGWLG-------------GPGKGRALGVGEVKFTGQVLPTAKKVTYEIDIKRVINRKLVMGIADGR 147 (172)
T ss_pred HHHHHHHHHHHHHHHhccc-------------ccCceEEeeccEEEECccCcCCCEEEEEEEEEEEEecCCCCEEEEEEE
Confidence 4456677776665553221 112345566678999999999998 89999888862 233444556
Q ss_pred EEECCCCcEEEEEEEEEEEE
Q 019267 235 IRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 235 I~d~~~Gevia~A~S~wV~i 254 (343)
++- +|+++++|+-.-+-+
T Consensus 148 i~v--~g~~va~a~~~~l~~ 165 (172)
T PRK05174 148 VLV--DGEEIYTAKDLKVGL 165 (172)
T ss_pred EEE--CCEEEEEEEeeEEEE
Confidence 665 789998886655443
No 90
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=33.00 E-value=3.3e+02 Score=23.73 Aligned_cols=90 Identities=16% Similarity=0.100 Sum_probs=56.3
Q ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhC--CceEEEEEeEEEEcccCCCCCEEEEEEEEE----
Q 019267 149 EIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKK--NLIWVVTRMQVVVDRYPTWNDVVNVETWVS---- 222 (343)
Q Consensus 149 D~D~~GhV~~~~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~--g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~---- 222 (343)
.++..|.++=..+...+--+.+-.+.-. +.+. +---||.+.+|+|.+|..-. ++.++...
T Consensus 39 N~N~~~T~FgGSl~slatLaGW~lv~l~------------l~e~~~~~~IVi~~~~i~Y~~Pv~~d--~~A~~~~~~~~~ 104 (144)
T PF09500_consen 39 NINHHGTMFGGSLYSLATLAGWGLVWLQ------------LKEAGLNGDIVIADSNIRYLKPVTGD--FTARCSLPEPED 104 (144)
T ss_dssp GB-TTSSB-HHHHHHHHHHHHHHHHHHH------------HHHHT---EEEEEEEEEEE-S---S----EEEEE------
T ss_pred CcCCCCCcchHHHHHHHHHHHHHHHHHH------------HHHhCCCCcEEEEeCceEEcCCCCCC--cEEEEeccccch
Confidence 6778888998888888888877655421 1122 24678999999999998754 44444444
Q ss_pred ---------EeCCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019267 223 ---------ASGKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 223 ---------~~gr~~~~R~f~I~d~~~Gevia~A~S~wV~i 254 (343)
.-||..+...-.|++ +|+.+++-+..+|.+
T Consensus 105 ~~~~~~~l~~~grari~l~~~i~~--~~~~~a~f~G~yv~l 143 (144)
T PF09500_consen 105 WERFLQTLARGGRARITLEVEIYS--GGELAAEFTGRYVAL 143 (144)
T ss_dssp -S---GGGGCTS-EEEEEEEEEEE--TTEEEEEEEEEEEEE
T ss_pred hHHHHHHHHcCCcEEEEEEEEEEE--CCEEEEEEEEEEEEE
Confidence 125667777778887 688999999988875
No 91
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=32.08 E-value=5e+02 Score=25.48 Aligned_cols=133 Identities=17% Similarity=0.150 Sum_probs=82.3
Q ss_pred HHHHHHhhhhhhcccCCCCCCCcccCcccccccccCCeeEEEEEEeecCCCCCCCCcCHHHHHHHHHHHHHHHHHH--cC
Q 019267 100 TTIFLAAEKQWMMLDWKPRRSDMLVDPFGIGKIVQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMT--AG 177 (343)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~vf~~~~~VR~~D~D~~GhV~~~~yl~~lqeAa~~h~~~--lG 177 (343)
...+..+|+.|++ |+--..+|+.. +...=.+.+-||...-=++-..-+..++-|+.+.-.-...- .|
T Consensus 148 ~~~~~~~~~pie~------R~~~~~~~~~~-----~k~~~~~~vWira~~~~pdd~~~~~~lLay~SD~~ll~tal~~Hg 216 (289)
T COG1946 148 VRAKFELERPIEI------RPVNLTNPFSG-----DKSSPQQQVWIRARGELPDDPRLHQALLAYLSDFTLLDTALQPHG 216 (289)
T ss_pred hhhhhccccceeE------EecccCCcccc-----ccCCcceeEEEEcCCCCCCCHHHHHHHHHHhccchhhhhhhccCC
Confidence 3444455666642 34445566665 22223456677776655666666777777777765322221 12
Q ss_pred CCccCCCCcHHHhhCCceEEEEEeEEEEcccCCCCCEEEEEEEEEEe-CCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019267 178 LLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS-GKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 178 l~~dGfg~~~~l~~~g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~-gr~~~~R~f~I~d~~~Gevia~A~S~wV~i 254 (343)
+ +| -..+..-+=..+.|.|+||.+.+|=+.-.+..... +...+.| =.|++. +|+++|......++-
T Consensus 217 ~---~~------~~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~sp~A~~~rgl~~-G~lf~r-~G~LiA~~~QEG~~r 283 (289)
T COG1946 217 L---GF------LTPGIQVASLDHSMWFHRPFRLDDWLLYAQESPSASGGRGLVR-GQLFDR-DGQLIASVVQEGLIR 283 (289)
T ss_pred C---cc------ccCcceEeeccceEEEeccccCCCEEEEEeeCCcccCCcceee-eEEEcC-CCCEEEEEeeeEEEe
Confidence 1 11 13455556667899999999999987777766654 4444545 456674 999999988877764
No 92
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A.
Probab=28.32 E-value=3.7e+02 Score=24.82 Aligned_cols=54 Identities=17% Similarity=0.175 Sum_probs=40.6
Q ss_pred EEEEEeEEEEcc-cCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEE
Q 019267 196 WVVTRMQVVVDR-YPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSL 250 (343)
Q Consensus 196 WVV~r~~Iey~r-~p~~gD~V~VeTwv~~~gr~~~~R~f~I~d~~~Gevia~A~S~ 250 (343)
.++.=-.+.+.+ +...++.+.+.+.....+...+.-+..++|+ +|+++++....
T Consensus 230 lP~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~v~d~-~G~~~~~~~gl 284 (295)
T PF14765_consen 230 LPVSIERIRIFRAPPPPGDRLYVYARLVKSDDDTITGDVTVFDE-DGRVVAELEGL 284 (295)
T ss_dssp EEEEEEEEEESSS--SSTSEEEEEEEEESTTTTEEEEEEEEEET-TSBEEEEEEEE
T ss_pred cccEeCEEEEEeccCCCCCEEEEEEEEecccceEEEEEEEEECC-CCCEEEEEccE
Confidence 333335677774 6788999999999977777778888999996 99999887654
No 93
>PF11456 DUF3019: Protein of unknown function (DUF3019); InterPro: IPR021559 This is a bacterial family of uncharacterised proteins.
Probab=27.49 E-value=1.7e+02 Score=23.95 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=26.4
Q ss_pred EEEEEEECCCCcEEEEEEEEEEEEecCCCcccCCC
Q 019267 231 RDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMP 265 (343)
Q Consensus 231 R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp~rIP 265 (343)
-.|.++|.+++..+|.+......+..++||-.|-|
T Consensus 65 ~~f~L~~~~~~~~la~~~v~V~~~~~k~Rrr~r~p 99 (102)
T PF11456_consen 65 TQFSLRDSDTGQPLAQVKVKVTWVSPKVRRRRRNP 99 (102)
T ss_pred eEEEEEeCCCCcEEEEEEEEEEEeccCcCCccCCC
Confidence 35788888788889988877777767777766654
No 94
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=27.41 E-value=2.9e+02 Score=26.49 Aligned_cols=57 Identities=12% Similarity=0.021 Sum_probs=43.3
Q ss_pred EEEEEeEEEEcccCCCCCEEEEEEEEEEeC-CcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 019267 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASG-KNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (343)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~VeTwv~~~g-r~~~~R~f~I~d~~~Gevia~A~S~wV~i 254 (343)
-.-..+.|.|+++.+..|=+..+++....+ ...+.+ =.|++. +|+++|.+....++-
T Consensus 226 ~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a~~gr~~~~-g~i~~~-~G~LvAs~~Qegl~r 283 (286)
T PRK10526 226 IATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVR-GEFYTQ-DGVLVASTVQEGVMR 283 (286)
T ss_pred EEeeeEeEEEeCCCCCCceEEEEEECCcccCCceEEE-EEEECC-CCCEEEEEEeeEEEE
Confidence 346678899999999999888888877553 333333 478886 999999998887663
No 95
>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]
Probab=26.47 E-value=3.2e+02 Score=27.62 Aligned_cols=108 Identities=12% Similarity=0.063 Sum_probs=64.9
Q ss_pred CCCCcCHH-HHHHHHHHHHHHHHHHcCCCccCCCCcHHHhhCCceEEEEE-eEEEEcccCCCCC-EEEEEEEEEEeCCcE
Q 019267 152 ADGTASIE-TLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTR-MQVVVDRYPTWND-VVNVETWVSASGKNG 228 (343)
Q Consensus 152 ~~GhV~~~-~yl~~lqeAa~~h~~~lGl~~dGfg~~~~l~~~g~~WVV~r-~~Iey~r~p~~gD-~V~VeTwv~~~gr~~ 228 (343)
..|..... .++.|+++...-....... . .++....-...|..+ -.|+|.+++..|+ .+.+.--|+-.++.+
T Consensus 22 ~s~~~~~~prigk~lE~ld~~a~~~hc~-----~-~~~~~~~p~~~VtAsV~~i~f~~~~~~~~~d~i~~a~Vt~a~~sS 95 (357)
T KOG2763|consen 22 HSGNTFVGPRIGKILEDLDALAVYRHCS-----E-AEEGATLPRTIVTASVDRIDFEKPSEVGQVDIIIVAKVTWAGKSS 95 (357)
T ss_pred cccceecchHHHHHHHHhhhhhheeecc-----c-ccccCccceEEEEeeEEEEEeeccccccceeEEEEEEEEeccccc
Confidence 44444444 7999999987322211100 0 001111113344443 5688899888885 445546677778888
Q ss_pred EEEEEEEEE--CCC--CcEEEEEEEEEEEEecCCCcccCCCH
Q 019267 229 MRRDWLIRN--AKT--GETLTRATSLWVMMNKLTRRLSKMPD 266 (343)
Q Consensus 229 ~~R~f~I~d--~~~--Gevia~A~S~wV~iD~~TRRp~rIPe 266 (343)
|...-.+.. ..+ ..++..|..++|--|..++ +++++.
T Consensus 96 MEv~i~V~q~~~~~~~~~~~~kA~f~fVard~~~~-~~~l~~ 136 (357)
T KOG2763|consen 96 MEVSIYVMQEDLATGEKSLVLKATFTFVARDATNG-KAPLNG 136 (357)
T ss_pred eEEEEEEEEehhccchhhheeeeEEEEEEecCCCC-ccccCC
Confidence 876555543 222 3478899999999998888 777664
No 96
>PHA02582 10 baseplate wedge subunit and tail pin; Provisional
Probab=22.22 E-value=1.7e+02 Score=31.23 Aligned_cols=72 Identities=11% Similarity=0.029 Sum_probs=48.3
Q ss_pred CceEEEEEeEEEEcccCCCCCEEEEEEEEEEeC---CcEEEEEEEEEECCCCcEEEEEEEEEEEEecCCCcccCCC
Q 019267 193 NLIWVVTRMQVVVDRYPTWNDVVNVETWVSASG---KNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMP 265 (343)
Q Consensus 193 g~~WVV~r~~Iey~r~p~~gD~V~VeTwv~~~g---r~~~~R~f~I~d~~~Gevia~A~S~wV~iD~~TRRp~rIP 265 (343)
+-.-.+--..|+.+.|...||+|.|.|...++. .++..|.-+|+|. .-....+.-..-..-|+.|.+-..+.
T Consensus 218 g~l~~LdG~~Irlr~pc~~gDtv~i~ty~dgia~~RSsY~~~~i~v~d~-~~t~~~s~pG~~~v~dl~t~~~~t~~ 292 (604)
T PHA02582 218 GELVPLDGKSIRLRQPCNAGDTVQIVTYMDGIASWRSSYNRRTIRVYDT-KLTTKTSVPGEIWVGDLSTKKSFTFA 292 (604)
T ss_pred CceeccCCceeEeecccCCCCeEEEEEeecchhhhhhhheeeeEEEEec-CcccccccCCcEEEeeccccccccHH
Confidence 334455667899999999999999999999864 3455677788885 22222233333344688887766543
Done!