Query 019269
Match_columns 343
No_of_seqs 250 out of 1964
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 13:29:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019269.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019269hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 6.2E-18 2.1E-22 149.4 13.2 153 175-340 4-160 (195)
2 2nyi_A Unknown protein; protei 99.8 5.4E-18 1.8E-22 149.8 12.7 158 39-248 3-163 (195)
3 1u8s_A Glycine cleavage system 99.7 4.6E-16 1.6E-20 136.9 17.3 134 176-322 6-147 (192)
4 1u8s_A Glycine cleavage system 99.7 2E-15 6.8E-20 132.8 18.7 156 40-247 5-165 (192)
5 3p96_A Phosphoserine phosphata 98.8 4.1E-07 1.4E-11 88.5 21.4 126 39-210 10-136 (415)
6 3p96_A Phosphoserine phosphata 98.8 9.7E-08 3.3E-12 92.9 16.7 121 175-302 11-136 (415)
7 2f06_A Conserved hypothetical 98.3 1.9E-05 6.6E-10 65.3 14.6 100 177-302 7-106 (144)
8 1zpv_A ACT domain protein; str 98.2 1.2E-05 4E-10 61.1 10.1 66 40-111 4-69 (91)
9 1zpv_A ACT domain protein; str 98.2 1.9E-05 6.4E-10 59.9 10.5 65 175-246 4-68 (91)
10 2f06_A Conserved hypothetical 98.1 0.00053 1.8E-08 56.5 18.4 112 41-223 6-117 (144)
11 2ko1_A CTR148A, GTP pyrophosph 98.0 4.3E-05 1.5E-09 57.3 9.2 64 268-341 5-68 (88)
12 2ko1_A CTR148A, GTP pyrophosph 97.8 0.00014 4.7E-09 54.4 9.6 49 41-90 5-53 (88)
13 2re1_A Aspartokinase, alpha an 97.7 0.00042 1.4E-08 58.8 12.3 108 175-300 24-138 (167)
14 3n0v_A Formyltetrahydrofolate 97.7 0.0012 4E-08 61.1 15.4 73 176-254 8-80 (286)
15 3nrb_A Formyltetrahydrofolate 97.6 0.0012 4.2E-08 61.0 15.3 108 175-295 6-115 (287)
16 3obi_A Formyltetrahydrofolate 97.6 0.0019 6.6E-08 59.7 16.4 67 40-110 5-72 (288)
17 3obi_A Formyltetrahydrofolate 97.6 0.0027 9.1E-08 58.7 17.0 110 176-296 6-117 (288)
18 3nrb_A Formyltetrahydrofolate 97.6 0.003 1E-07 58.4 16.9 66 39-110 5-71 (287)
19 2re1_A Aspartokinase, alpha an 97.6 0.0058 2E-07 51.6 17.3 110 39-206 23-136 (167)
20 3o1l_A Formyltetrahydrofolate 97.6 0.003 1E-07 58.8 16.5 67 175-245 21-87 (302)
21 3n0v_A Formyltetrahydrofolate 97.5 0.004 1.4E-07 57.5 16.8 66 40-110 7-73 (286)
22 3o1l_A Formyltetrahydrofolate 97.5 0.00055 1.9E-08 63.7 10.9 68 39-110 20-88 (302)
23 3lou_A Formyltetrahydrofolate 97.5 0.0055 1.9E-07 56.7 17.1 45 175-219 9-53 (292)
24 3lou_A Formyltetrahydrofolate 97.5 0.0049 1.7E-07 57.1 16.7 70 39-110 8-78 (292)
25 2dt9_A Aspartokinase; protein- 97.4 0.0018 6E-08 54.9 11.7 111 174-300 14-130 (167)
26 2dtj_A Aspartokinase; protein- 97.3 0.0031 1.1E-07 54.0 12.8 109 175-300 14-130 (178)
27 2f1f_A Acetolactate synthase i 97.2 0.0018 6.2E-08 54.9 9.7 64 41-110 3-67 (164)
28 2f1f_A Acetolactate synthase i 97.1 0.0019 6.3E-08 54.8 9.0 64 176-246 3-67 (164)
29 3l76_A Aspartokinase; alloster 97.1 0.089 3.1E-06 53.4 22.5 197 39-302 268-479 (600)
30 3l76_A Aspartokinase; alloster 97.0 0.16 5.4E-06 51.6 23.7 199 38-302 352-564 (600)
31 2pc6_A Probable acetolactate s 97.0 0.0028 9.4E-08 53.8 8.7 64 41-110 4-68 (165)
32 2pc6_A Probable acetolactate s 96.9 0.0021 7.2E-08 54.5 7.6 66 176-247 4-69 (165)
33 2dtj_A Aspartokinase; protein- 96.9 0.028 9.4E-07 48.0 14.1 110 39-206 13-128 (178)
34 2dt9_A Aspartokinase; protein- 96.8 0.026 8.9E-07 47.5 13.3 106 39-205 14-127 (167)
35 3s1t_A Aspartokinase; ACT doma 96.7 0.19 6.4E-06 42.9 18.5 112 39-208 14-131 (181)
36 3s1t_A Aspartokinase; ACT doma 96.5 0.031 1.1E-06 47.9 12.1 113 175-302 15-133 (181)
37 2fgc_A Acetolactate synthase, 96.4 0.014 4.6E-07 50.6 9.2 66 40-111 28-94 (193)
38 2fgc_A Acetolactate synthase, 96.4 0.01 3.5E-07 51.4 8.1 65 176-246 29-93 (193)
39 2jhe_A Transcription regulator 96.4 0.0042 1.4E-07 52.2 5.6 36 270-307 2-37 (190)
40 4go7_X Aspartokinase; transfer 96.4 0.028 9.6E-07 49.0 10.9 115 174-302 33-152 (200)
41 1y7p_A Hypothetical protein AF 96.2 0.013 4.6E-07 51.4 7.7 62 41-110 4-69 (223)
42 4go7_X Aspartokinase; transfer 96.0 0.1 3.5E-06 45.4 12.7 109 38-206 32-148 (200)
43 3ab4_A Aspartokinase; aspartat 96.0 0.093 3.2E-06 50.8 13.5 108 175-300 263-379 (421)
44 1y7p_A Hypothetical protein AF 95.9 0.011 3.7E-07 52.1 5.9 39 270-308 6-44 (223)
45 3ab4_A Aspartokinase; aspartat 95.5 1.2 4E-05 43.0 19.3 109 39-205 262-376 (421)
46 2jhe_A Transcription regulator 95.3 0.064 2.2E-06 44.7 8.5 59 43-110 2-60 (190)
47 3c1m_A Probable aspartokinase; 94.9 0.21 7E-06 49.2 12.0 105 175-299 317-438 (473)
48 1ygy_A PGDH, D-3-phosphoglycer 93.5 0.26 8.9E-06 49.1 9.4 52 174-225 452-503 (529)
49 3tvi_A Aspartokinase; structur 92.6 0.58 2E-05 45.6 10.1 104 175-300 297-409 (446)
50 1ygy_A PGDH, D-3-phosphoglycer 92.0 0.51 1.8E-05 47.0 9.2 62 269-337 455-516 (529)
51 1sc6_A PGDH, D-3-phosphoglycer 91.9 0.46 1.6E-05 45.7 8.4 49 175-225 330-378 (404)
52 3c1m_A Probable aspartokinase; 91.9 5 0.00017 39.2 16.1 115 39-205 316-436 (473)
53 1sc6_A PGDH, D-3-phosphoglycer 91.8 1.1 3.7E-05 43.1 10.9 50 40-90 330-379 (404)
54 3tvi_A Aspartokinase; structur 91.7 6.8 0.00023 38.0 16.6 105 41-207 298-408 (446)
55 3k5p_A D-3-phosphoglycerate de 91.6 1.2 4.1E-05 43.0 11.0 51 38-89 340-390 (416)
56 2qmx_A Prephenate dehydratase; 91.1 0.41 1.4E-05 43.9 6.8 52 270-325 202-253 (283)
57 2qmx_A Prephenate dehydratase; 90.2 0.89 3.1E-05 41.6 8.1 64 175-245 199-263 (283)
58 3mwb_A Prephenate dehydratase; 90.1 0.56 1.9E-05 43.6 6.8 52 270-325 203-255 (313)
59 3luy_A Probable chorismate mut 89.8 1.2 4.1E-05 41.6 8.9 47 277-327 217-263 (329)
60 2qmw_A PDT, prephenate dehydra 89.8 0.79 2.7E-05 41.6 7.4 49 270-321 188-239 (267)
61 3luy_A Probable chorismate mut 89.3 2.7 9.3E-05 39.2 10.9 65 175-246 205-272 (329)
62 3mah_A Aspartokinase; aspartat 88.9 0.73 2.5E-05 38.0 6.1 99 175-300 17-121 (157)
63 2cdq_A Aspartokinase; aspartat 88.6 9.9 0.00034 37.5 15.0 108 40-206 340-452 (510)
64 2cdq_A Aspartokinase; aspartat 88.6 1 3.6E-05 44.6 7.9 108 175-300 340-454 (510)
65 3mwb_A Prephenate dehydratase; 87.9 1.2 3.9E-05 41.4 7.3 54 174-229 199-254 (313)
66 2qmw_A PDT, prephenate dehydra 87.8 1.3 4.5E-05 40.1 7.5 51 175-227 185-239 (267)
67 3mah_A Aspartokinase; aspartat 87.5 5.7 0.0002 32.4 10.7 47 39-90 16-65 (157)
68 3k5p_A D-3-phosphoglycerate de 85.2 2.2 7.6E-05 41.1 7.9 49 174-224 341-389 (416)
69 3mtj_A Homoserine dehydrogenas 84.7 3.4 0.00011 40.2 9.0 38 265-302 356-393 (444)
70 3mtj_A Homoserine dehydrogenas 73.9 3.3 0.00011 40.2 5.0 34 175-208 358-391 (444)
71 1phz_A Protein (phenylalanine 68.5 5.1 0.00017 38.6 4.8 53 173-227 31-84 (429)
72 1phz_A Protein (phenylalanine 67.3 4 0.00014 39.3 3.9 47 270-319 36-82 (429)
73 1zhv_A Hypothetical protein AT 43.9 13 0.00046 29.8 2.7 40 39-80 60-102 (134)
74 1zvp_A Hypothetical protein VC 43.3 54 0.0018 26.1 6.2 43 36-80 66-111 (133)
75 3r6a_A Uncharacterized protein 39.6 54 0.0018 25.6 5.8 46 271-327 69-114 (144)
76 2j0w_A Lysine-sensitive aspart 39.3 26 0.0009 33.8 4.5 105 175-299 307-418 (449)
77 1ib8_A Conserved protein SP14. 38.6 1.1E+02 0.0037 25.1 7.6 91 189-296 14-107 (164)
78 3kol_A Oxidoreductase, glyoxal 34.0 44 0.0015 25.6 4.4 39 282-327 109-147 (156)
79 3rri_A Glyoxalase/bleomycin re 31.8 44 0.0015 25.1 3.9 44 280-327 79-124 (135)
80 1zvp_A Hypothetical protein VC 31.7 50 0.0017 26.3 4.3 28 275-302 81-108 (133)
81 1zhv_A Hypothetical protein AT 30.5 40 0.0014 26.9 3.5 33 270-302 64-99 (134)
82 2hza_A Nickel-responsive regul 29.9 2E+02 0.0068 22.5 9.7 62 43-110 55-117 (133)
83 4g6x_A Glyoxalase/bleomycin re 26.8 73 0.0025 24.8 4.5 39 282-327 109-147 (155)
84 2rbb_A Glyoxalase/bleomycin re 25.7 95 0.0033 23.5 5.0 50 271-327 79-128 (141)
85 2bj7_A Nickel responsive regul 25.7 2.4E+02 0.0083 22.1 9.8 62 43-110 58-119 (138)
86 2l48_A N-acetylmuramoyl-L-alan 25.5 2E+02 0.0068 21.0 7.0 56 45-110 22-77 (85)
87 3g12_A Putative lactoylglutath 25.3 2.1E+02 0.0072 21.3 7.3 50 38-95 64-114 (128)
88 1ecs_A Bleomycin resistance pr 24.7 1.7E+02 0.0058 21.5 6.2 40 282-327 69-115 (126)
89 1f9z_A Glyoxalase I; beta-alph 24.2 1.8E+02 0.0063 21.1 6.3 47 271-327 75-122 (135)
90 3sk2_A EHPR; antibiotic resist 24.0 90 0.0031 23.3 4.5 49 271-327 76-127 (132)
91 3g12_A Putative lactoylglutath 23.4 1.6E+02 0.0053 22.0 5.8 47 270-327 69-116 (128)
92 3ey7_A Biphenyl-2,3-DIOL 1,2-d 23.0 63 0.0021 23.8 3.3 42 282-327 84-126 (133)
93 3zw5_A Glyoxalase domain-conta 23.0 61 0.0021 25.0 3.3 42 282-327 101-143 (147)
94 2a4x_A Mitomycin-binding prote 22.6 1.2E+02 0.0041 22.8 4.9 50 271-327 75-124 (138)
95 3hdp_A Glyoxalase-I; glutathio 22.6 1E+02 0.0034 22.8 4.4 41 282-327 88-129 (133)
96 2wvf_A Hpnikr, putative nickel 22.1 3E+02 0.01 21.9 10.9 62 43-110 67-129 (148)
97 3ghj_A Putative integron gene 22.1 84 0.0029 24.0 4.0 40 282-327 98-137 (141)
98 1vq3_A Phosphoribosylformylgly 21.1 1.3E+02 0.0044 22.4 4.5 61 272-343 19-84 (94)
99 3rhe_A NAD-dependent benzaldeh 20.9 98 0.0033 24.1 4.2 49 271-327 71-119 (148)
100 3r4q_A Lactoylglutathione lyas 20.6 69 0.0024 25.2 3.2 50 270-327 79-128 (160)
101 3e5d_A Putative glyoxalase I; 20.2 1.2E+02 0.0041 22.0 4.4 49 271-326 75-123 (127)
102 3vw9_A Lactoylglutathione lyas 20.1 71 0.0024 25.6 3.3 47 270-327 130-176 (187)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.75 E-value=6.2e-18 Score=149.42 Aligned_cols=153 Identities=15% Similarity=0.118 Sum_probs=106.3
Q ss_pred CeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcce
Q 019269 175 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRV 254 (343)
Q Consensus 175 ~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~~ 254 (343)
..++|+|+|+|||||+++|+++|+++|+||.+|++++ ..|+.++ .|.+..... ..+.+++.|++.|...+.+ ...
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~-~~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~-~~~ 78 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMAC-LGGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQIS-TRR 78 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ETTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEE-EEE
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEE-ECCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHh-cCC
Confidence 3579999999999999999999999999999999996 4554444 677763221 2233556666665433221 111
Q ss_pred e--eecCCCCceeeeeeeEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccC--ceEeeeeEEEEEcCCCCCCCchH
Q 019269 255 T--VVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIG--DREWEVYRVLLDEGDGLSVPRNK 330 (343)
Q Consensus 255 ~--~~~~~~~~~v~~~~~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g--~~~~dv~~F~v~~~~g~~l~~~~ 330 (343)
. +.. .....-.-.+.|+|.|+|||||+++|+++|+++|+||..+++. |.+ ++..|. ||++..-+.+ +..
T Consensus 79 ~~~~~~-~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~--t~~~~~~~~~~--F~m~~~~~~~--~~~ 151 (195)
T 2nyi_A 79 ASSVAE-RHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETE--TLPAPFAGFTL--FRMGSRVAFP--FPL 151 (195)
T ss_dssp CCCC-----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEE--EEECSSTTCEE--EEEEEEEEEE--GGG
T ss_pred eEEEEe-CCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceee--ecccccCCCCe--EEEEEEEEcC--CCc
Confidence 1 111 0000011235899999999999999999999999999999999 888 788899 9997754433 222
Q ss_pred HHHHHHHHHc
Q 019269 331 IEEGVWKLLM 340 (343)
Q Consensus 331 ~~~~l~~~L~ 340 (343)
. ++|+++|.
T Consensus 152 ~-~~l~~~l~ 160 (195)
T 2nyi_A 152 Y-QEVVTALS 160 (195)
T ss_dssp H-HHHHHHHH
T ss_pred c-HHHHHHHH
Confidence 3 55555553
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.75 E-value=5.4e-18 Score=149.83 Aligned_cols=158 Identities=13% Similarity=0.079 Sum_probs=108.7
Q ss_pred CCEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhcccccc
Q 019269 39 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMIS 118 (343)
Q Consensus 39 ~~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~~~ 118 (343)
...++|+|+|+|||||+++|+++|+.+|+||++|++++..+++++ .|.|..+.. ..+.+++.|++.|...+...
T Consensus 3 ~~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~--- 76 (195)
T 2nyi_A 3 TQSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQIST--- 76 (195)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEEE---
T ss_pred ceEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHhc---
Confidence 346899999999999999999999999999999999998776666 777765321 11235666666665432211
Q ss_pred cccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEECCcccHHHHHHHHHH
Q 019269 119 CDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQDHKGLLYDIMRTLK 198 (343)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~DrpGLl~~i~~~L~ 198 (343)
... .... . .+ . ......++|+|.|+|||||+++|+++|+
T Consensus 77 --------~~~------~~~~---------------------~-~~----~-~~~~~~~iltv~g~DrpGiva~Vt~~La 115 (195)
T 2nyi_A 77 --------RRA------SSVA---------------------E-RH----V-SPDTREYELYVEGPDSEGIVEAVTAVLA 115 (195)
T ss_dssp --------EEC------CCC------------------------------C-CTTEEEEEEEEEEECCTTHHHHHHHHHH
T ss_pred --------CCe------EEEE---------------------e-CC----c-CCCCcEEEEEEEeCCCcCHHHHHHHHHH
Confidence 010 0000 0 00 1 2334568999999999999999999999
Q ss_pred hCCeeEEEEEEEEeecC--CEEEEEEEEe-cCCCCCCChHHHHHHHHHHHHHH
Q 019269 199 DYNIQVSYGRFSRRQRG--NCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMEL 248 (343)
Q Consensus 199 ~~glnI~~A~i~t~t~g--~~~~d~F~v~-~~g~~i~~~~~~~~l~~~L~~~L 248 (343)
++|+||.+++..+ .+ ++..+.|++. ..+.+ +... +.|+++|....
T Consensus 116 ~~g~nI~~~~~~t--~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a 163 (195)
T 2nyi_A 116 KKGANIVELETET--LPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVE 163 (195)
T ss_dssp HTTCEEEEEEEEE--EECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHH
T ss_pred HcCCCEEEceeee--cccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHH
Confidence 9999999999984 43 3345778774 22222 1234 67888876543
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.70 E-value=4.6e-16 Score=136.86 Aligned_cols=134 Identities=13% Similarity=0.098 Sum_probs=98.1
Q ss_pred eEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcce-
Q 019269 176 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRV- 254 (343)
Q Consensus 176 ~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~~- 254 (343)
.++|+|+|+||||++++|+++|+++|+||.++++++ +. +.+.-.|.+... ....+.|++.|.+.. ++...
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~-~~-~~f~~~~~v~~~------~~~~~~l~~~L~~~~-~~~~~~ 76 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM-FG-KEFTLLMLISGS------PSNITRVETTLPLLG-QQHDLI 76 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ET-TEEEEEEEEEEC------HHHHHHHHHHHHHHH-HHHTCE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeee-cC-CceEEEEEEecC------CCCHHHHHHHHHHHH-HhcCCE
Confidence 478999999999999999999999999999999985 44 455546777521 135678888887655 22222
Q ss_pred -eee--cCCCCceeeeeeeEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCc----eEeeeeEEEEEcCC
Q 019269 255 -TVV--SRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGD----REWEVYRVLLDEGD 322 (343)
Q Consensus 255 -~~~--~~~~~~~v~~~~~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~----~~~dv~~F~v~~~~ 322 (343)
.+. .+.....-...++|+|.++||||++++|+.+|+++|+||..++.. |.++ +..|. ||++..-
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~--t~~~~~~~~~~~~--F~~~~~~ 147 (192)
T 1u8s_A 77 TMMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQ--TISKDKLHSEQNQ--FHIAISA 147 (192)
T ss_dssp EEEEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEE--EEC--------CE--EEEEEEE
T ss_pred EEEEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhh--cccCCccCCCCCE--EEEEEEE
Confidence 111 111111111235899999999999999999999999999999999 8885 68899 9987653
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.68 E-value=2e-15 Score=132.78 Aligned_cols=156 Identities=10% Similarity=0.052 Sum_probs=107.2
Q ss_pred CEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhccccccc
Q 019269 40 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMISC 119 (343)
Q Consensus 40 ~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~~~~ 119 (343)
..+.|+|+|+||||++++++++|+.+|+||+++++++..++++ -.|.|..+ +..++.|++.|........
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~-~~~~v~~~------~~~~~~l~~~L~~~~~~~~--- 74 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFT-LLMLISGS------PSNITRVETTLPLLGQQHD--- 74 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEE-EEEEEEEC------HHHHHHHHHHHHHHHHHHT---
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceE-EEEEEecC------CCCHHHHHHHHHHHHHhcC---
Confidence 4578999999999999999999999999999999999754444 47777642 2467788888887552211
Q ss_pred ccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEECCcccHHHHHHHHHHh
Q 019269 120 DVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKD 199 (343)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~DrpGLl~~i~~~L~~ 199 (343)
.... .. +. + .++ +..+...++|+|.++||||++++|+++|++
T Consensus 75 ------~~~~--------~~-~~--------~----------~~~-----~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~ 116 (192)
T 1u8s_A 75 ------LITM--------MK-RT--------S----------PHD-----HQTHAYTVEVYVESDDKLGLTEKFTQFFAQ 116 (192)
T ss_dssp ------CEEE--------EE-EE--------C----------CCC-----CCCCSEEEEEEEEESCCTTHHHHHHHHHHH
T ss_pred ------CEEE--------EE-eC--------C----------CCC-----CccCCceEEEEEEeCCCccHHHHHHHHHHH
Confidence 0110 00 00 0 011 233446789999999999999999999999
Q ss_pred CCeeEEEEEEEEeecCC----EEEEEEEEe-cCCCCCCChHHHHHHHHHHHHH
Q 019269 200 YNIQVSYGRFSRRQRGN----CEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWME 247 (343)
Q Consensus 200 ~glnI~~A~i~t~t~g~----~~~d~F~v~-~~g~~i~~~~~~~~l~~~L~~~ 247 (343)
+|+||.+++.. +.+. +..+.|++. ..+.+ +....+.|+++|.+.
T Consensus 117 ~~~nI~~~~~~--t~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~~ 165 (192)
T 1u8s_A 117 RQIGMASLSAQ--TISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDAL 165 (192)
T ss_dssp TTCCEEEEEEE--EEC--------CEEEEEEEEEEC--TTSCHHHHHHHHHHH
T ss_pred cCCcHHHhhhh--cccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHHH
Confidence 99999999988 4442 466778774 22111 122356777877653
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.82 E-value=4.1e-07 Score=88.46 Aligned_cols=126 Identities=9% Similarity=0.092 Sum_probs=86.6
Q ss_pred CCEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhcccccc
Q 019269 39 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMIS 118 (343)
Q Consensus 39 ~~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~~~ 118 (343)
...++|+|.|+||||+.+.++++|+.+|+||++.+.+.. .|++.-...+..+.+ ....+.|++.|.. +..+.
T Consensus 10 ~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~-~~~f~~~~~~~~~~~----~~~~~~l~~~l~~-~~~~~-- 81 (415)
T 3p96_A 10 KVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVI-RHRLTLGVLVCCPAD----VADGPALRHDVEA-AIRKV-- 81 (415)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEE-TTEEEEEEEEEECHH----HHTSHHHHHHHHH-HHHHT--
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEE-CCEeEEEEEEEecCC----cCCHHHHHHHHHH-HHHHc--
Confidence 356899999999999999999999999999999999886 566644444432211 0123577777765 32211
Q ss_pred cccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEECC-cccHHHHHHHHH
Q 019269 119 CDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQD-HKGLLYDIMRTL 197 (343)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~D-rpGLl~~i~~~L 197 (343)
+-+.. +... . ..+ ......+..+++.++| ++|++.+|+.++
T Consensus 82 ------~~~~~--------~~~~---------~----------~~~-----~~~~~~~~~~~llg~~~~~~~~~~i~~~l 123 (415)
T 3p96_A 82 ------GLDVS--------IERS---------D----------DVP-----IIREPSTHTIFVLGRPITAAAFGAVAREV 123 (415)
T ss_dssp ------TCEEE--------EEEC---------S----------SSC-----SSCCCCSEEEEEEESSCCHHHHHHHHHHH
T ss_pred ------CeEEE--------EEEC---------C----------ccc-----ccCCCCcEEEEEEeCCCCHHHHHHHHHHH
Confidence 01110 0000 0 000 0123457899999999 999999999999
Q ss_pred HhCCeeEEEEEEE
Q 019269 198 KDYNIQVSYGRFS 210 (343)
Q Consensus 198 ~~~glnI~~A~i~ 210 (343)
+++|+||.+.+-.
T Consensus 124 ~~~~~Ni~~l~~~ 136 (415)
T 3p96_A 124 AALGVNIDLIRGV 136 (415)
T ss_dssp HHTTCEEEEEEEE
T ss_pred HHcCCCccceeec
Confidence 9999999987765
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.82 E-value=9.7e-08 Score=92.92 Aligned_cols=121 Identities=7% Similarity=0.029 Sum_probs=83.8
Q ss_pred CeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcce
Q 019269 175 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRV 254 (343)
Q Consensus 175 ~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~~ 254 (343)
..++|+|.|+|||||++.|+++|+++|+||.+++-+ ..++.+.-...+..+... ...+.|++.|.. +..+..+
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~--~~~~~f~~~~~~~~~~~~----~~~~~l~~~l~~-~~~~~~~ 83 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQV--VIRHRLTLGVLVCCPADV----ADGPALRHDVEA-AIRKVGL 83 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEE--EETTEEEEEEEEEECHHH----HTSHHHHHHHHH-HHHHTTC
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeE--EECCEeEEEEEEEecCCc----CCHHHHHHHHHH-HHHHcCe
Confidence 457899999999999999999999999999999887 455565433334321110 022567777643 4433333
Q ss_pred e--eecCCCCcee--eeeeeEEEEeCC-CccHHHHHHHHHHhCCceEEEEEee
Q 019269 255 T--VVSRGPDTEL--LVANPVELSGKG-RPLVFHDITLALKMLDICIFSAEIG 302 (343)
Q Consensus 255 ~--~~~~~~~~~v--~~~~~ieV~~~D-rpGLL~~I~~~l~~~gi~I~~AkI~ 302 (343)
+ +......++. .-...+++.+.| +||++.+|+.+|+++|+||...+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~ 136 (415)
T 3p96_A 84 DVSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGV 136 (415)
T ss_dssp EEEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeec
Confidence 2 2211111111 112478999999 9999999999999999999998887
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.30 E-value=1.9e-05 Score=65.32 Aligned_cols=100 Identities=16% Similarity=0.076 Sum_probs=67.7
Q ss_pred EEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcceee
Q 019269 177 TLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRVTV 256 (343)
Q Consensus 177 t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~~~~ 256 (343)
..|+|..+|+||.++++++.|++.|+||....+.. +. +... +.+.. .+++ +.++.|.+ . +- .
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~-~~-~~~~--~~~~~-----~d~~---~a~~~L~~-~-G~-~--- 68 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE-NA-DFGI--LRGIV-----SDPD---KAYKALKD-N-HF-A--- 68 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE-CS-SCEE--EEEEE-----SCHH---HHHHHHHH-T-TC-C---
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe-cC-CCCE--EEEEe-----CCHH---HHHHHHHH-c-CC-e---
Confidence 57888999999999999999999999999765542 22 2111 22221 2232 33344432 1 11 1
Q ss_pred ecCCCCceeeeeeeEEEEeCCCccHHHHHHHHHHhCCceEEEEEee
Q 019269 257 VSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDICIFSAEIG 302 (343)
Q Consensus 257 ~~~~~~~~v~~~~~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~ 302 (343)
+.....+-+..+|+||.+++|+++|++.|+||.+....
T Consensus 69 --------v~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~ 106 (144)
T 2f06_A 69 --------VNITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSF 106 (144)
T ss_dssp --------EEEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred --------EeeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEE
Confidence 11123567778899999999999999999999776654
No 8
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.19 E-value=1.2e-05 Score=61.09 Aligned_cols=66 Identities=12% Similarity=0.199 Sum_probs=52.1
Q ss_pred CEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHH
Q 019269 40 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTI 111 (343)
Q Consensus 40 ~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~ 111 (343)
..+.|+|.++||||++++++++|+.+|+||.+.+.++.. |.+.-.+.+..++ ...++.|.+.|.+.
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~-~~~~~~i~v~~~~-----~~~l~~l~~~L~~~ 69 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLD-EYFTMMAVVSSDE-----KQDFTYLRNEFEAF 69 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEET-TEEEEEEEEEESS-----CCCHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEc-CEEEEEEEEEeCC-----CCCHHHHHHHHHHH
Confidence 457899999999999999999999999999999998864 7766666664322 22456777777763
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.15 E-value=1.9e-05 Score=59.90 Aligned_cols=65 Identities=9% Similarity=0.146 Sum_probs=47.8
Q ss_pred CeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHH
Q 019269 175 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWM 246 (343)
Q Consensus 175 ~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~ 246 (343)
..+.|+|.++||||++++|+++|+++|+||.+....+ .++.+.-.+.+...+. ..++.|.+.|.+
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~--~~~~~~~~i~v~~~~~-----~~l~~l~~~L~~ 68 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTV--LDEYFTMMAVVSSDEK-----QDFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTEEEEEEEEEESSC-----CCHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEE--EcCEEEEEEEEEeCCC-----CCHHHHHHHHHH
Confidence 3578999999999999999999999999999988874 3355555555542221 134567777654
No 10
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.06 E-value=0.00053 Score=56.49 Aligned_cols=112 Identities=21% Similarity=0.232 Sum_probs=72.8
Q ss_pred EEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhcccccccc
Q 019269 41 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMISCD 120 (343)
Q Consensus 41 ~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~~~~~ 120 (343)
...|+|..+|+||.++++++.|+..|+||..-.+....+. .+-.|.+. ++ ++.++.|++ . +.
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~-~~~~~~~~-------d~---~~a~~~L~~-~-G~----- 67 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADF-GILRGIVS-------DP---DKAYKALKD-N-HF----- 67 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSC-EEEEEEES-------CH---HHHHHHHHH-T-TC-----
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCC-CEEEEEeC-------CH---HHHHHHHHH-c-CC-----
Confidence 3578899999999999999999999999997665543332 11123322 12 233333433 1 10
Q ss_pred cccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEECCcccHHHHHHHHHHhC
Q 019269 121 VEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKDY 200 (343)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~DrpGLl~~i~~~L~~~ 200 (343)
... . ..++.+..+|+||.+++++++|++.
T Consensus 68 ------------------------------------------~v~--~-------~svv~v~~~d~pGvla~i~~~L~~~ 96 (144)
T 2f06_A 68 ------------------------------------------AVN--I-------TDVVGISCPNVPGALAKVLGFLSAE 96 (144)
T ss_dssp ------------------------------------------CEE--E-------EEEEEEEEESSTTHHHHHHHHHHHT
T ss_pred ------------------------------------------eEe--e-------eeEEEEEeCCCCcHHHHHHHHHHHC
Confidence 000 0 1357778899999999999999999
Q ss_pred CeeEEEEEEEEeecCCEEEEEEE
Q 019269 201 NIQVSYGRFSRRQRGNCEIDLFI 223 (343)
Q Consensus 201 glnI~~A~i~t~t~g~~~~d~F~ 223 (343)
|+||.....+. .+....-.|.
T Consensus 97 ~InI~~~~~~~--~~~~~~~~i~ 117 (144)
T 2f06_A 97 GVFIEYMYSFA--NNNVANVVIR 117 (144)
T ss_dssp TCCEEEEEEEE--ETTEEEEEEE
T ss_pred CCCEEEEEEEc--cCCcEEEEEE
Confidence 99998655441 3345543343
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.97 E-value=4.3e-05 Score=57.25 Aligned_cols=64 Identities=9% Similarity=0.006 Sum_probs=47.5
Q ss_pred eeeEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCCchHHHHHHHHHHcC
Q 019269 268 ANPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRNKIEEGVWKLLMG 341 (343)
Q Consensus 268 ~~~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~~~~~~~~l~~~L~~ 341 (343)
.+.+.|.+.||||+|++|+.+|++.|+||.++++. +.++.+..+ |.+...+ .+ ..+++.++|..
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~--~~~~~~~~~--i~v~~~~-----~~-~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLN--AKDGIFTCN--LMIFVKN-----TD-KLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEE--ECSSEEEEE--EEEEESS-----HH-HHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEE--EcCCEEEEE--EEEEECC-----HH-HHHHHHHHHhc
Confidence 45789999999999999999999999999999998 666544444 4444332 22 34666666653
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.81 E-value=0.00014 Score=54.39 Aligned_cols=49 Identities=12% Similarity=0.274 Sum_probs=40.5
Q ss_pred EEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEec
Q 019269 41 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTD 90 (343)
Q Consensus 41 ~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~ 90 (343)
.+.|.|.++||||++++|+++|+..|+||.+..+.+.. +.+...|.+..
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~-~~~~~~i~v~~ 53 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKD-GIFTCNLMIFV 53 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECS-SEEEEEEEEEE
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcC-CEEEEEEEEEE
Confidence 45788999999999999999999999999999998854 46555565543
No 13
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.72 E-value=0.00042 Score=58.81 Aligned_cols=108 Identities=17% Similarity=0.078 Sum_probs=70.0
Q ss_pred CeEEEEEEE-CCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcc
Q 019269 175 GHTLVQIVC-QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLR 253 (343)
Q Consensus 175 ~~t~i~V~~-~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~ 253 (343)
+.+.|+|.+ +|+||.++++.++|+++|+||....... +.++...-.|.+..+ ..++..+.|.+ +..++.
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~-~~~g~~~isf~v~~~--------~~~~a~~~l~~-~~~~l~ 93 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNV-GSEGTTDFSFTVPRG--------DYKQTLEILSE-RQDSIG 93 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECGG--------GHHHHHHHHHH-SSTTTT
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCC-CCCCeeEEEEEEech--------HHHHHHHHHHH-HHHHcC
Confidence 457888884 9999999999999999999998543321 112333334666421 11233344433 333222
Q ss_pred eeeecCCCCceeee---eeeEEEEeCC---CccHHHHHHHHHHhCCceEEEEE
Q 019269 254 VTVVSRGPDTELLV---ANPVELSGKG---RPLVFHDITLALKMLDICIFSAE 300 (343)
Q Consensus 254 ~~~~~~~~~~~v~~---~~~ieV~~~D---rpGLL~~I~~~l~~~gi~I~~Ak 300 (343)
. ..+.. -..+.|.+.+ +||+++++..+|.+.||||....
T Consensus 94 ~--------~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 94 A--------ASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp C--------SEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE
T ss_pred C--------ceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE
Confidence 2 11111 1378888886 99999999999999999999843
No 14
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.67 E-value=0.0012 Score=61.13 Aligned_cols=73 Identities=11% Similarity=0.072 Sum_probs=49.8
Q ss_pred eEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcce
Q 019269 176 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRV 254 (343)
Q Consensus 176 ~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~~ 254 (343)
.++|+|.|+||||++++|+++|+++|+||.+++-++....+.+.-...+.... .. ..+.|+++|. .+..+...
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-~~----~~~~L~~~f~-~la~~l~m 80 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-DF----DEAGFRAGLA-ERSEAFGM 80 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-SC----CHHHHHHHHH-HHHGGGTC
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-CC----CHHHHHHHHH-HHHHHcCC
Confidence 47899999999999999999999999999998876433344543222233211 11 2467878774 34555443
No 15
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.65 E-value=0.0012 Score=60.96 Aligned_cols=108 Identities=9% Similarity=0.097 Sum_probs=66.0
Q ss_pred CeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcce
Q 019269 175 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRV 254 (343)
Q Consensus 175 ~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~~ 254 (343)
..++|+|.|+|||||+++|+++|+++|+||.+++-++....+.+.-...+..++ . ..+.|+++|. .+..+...
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~--~----~~~~L~~~f~-~la~~~~m 78 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPV--A----GVNDFNSAFG-KVVEKYNA 78 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC---------CHHHHHHH-HHHGGGTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCC--C----CHHHHHHHHH-HHHHHcCC
Confidence 457999999999999999999999999999999876433344544222222211 1 1236777764 34555444
Q ss_pred e--eecCCCCceeeeeeeEEEEeCCCccHHHHHHHHHHhCCce
Q 019269 255 T--VVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDIC 295 (343)
Q Consensus 255 ~--~~~~~~~~~v~~~~~ieV~~~DrpGLL~~I~~~l~~~gi~ 295 (343)
+ +.....+. .|-|.+.-+..-|.++-....+-.++
T Consensus 79 ~~~l~~~~~~~------ri~vl~Sg~g~nl~~ll~~~~~g~l~ 115 (287)
T 3nrb_A 79 EWWFRPRTDRK------KVVIMVSKFDHCLGDLLYRHRLGELD 115 (287)
T ss_dssp EEEEEETTCCC------EEEEEECSCCHHHHHHHHHHHHTSSC
T ss_pred eeEeeccCCCc------EEEEEEeCCCcCHHHHHHHHHCCCCC
Confidence 3 22222112 33444445556777777777665553
No 16
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.63 E-value=0.0019 Score=59.68 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=50.0
Q ss_pred CEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEec-CCCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 40 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTT-PDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 40 ~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~-~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
..+.|+|.|+||||+.+++++.|+.+|+||.+.+.++. .+|++.-...+..+.+. ...+.|++.|..
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~----~~~~~L~~~f~~ 72 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV----IPLASLRTGFGV 72 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC----CCHHHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC----CCHHHHHHHHHH
Confidence 45789999999999999999999999999999999853 36776555545432221 124677777765
No 17
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.61 E-value=0.0027 Score=58.74 Aligned_cols=110 Identities=13% Similarity=0.158 Sum_probs=68.0
Q ss_pred eEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCccee
Q 019269 176 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRVT 255 (343)
Q Consensus 176 ~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~~~ 255 (343)
.++|+|.|+||||++++|+++|+++|+||.+++-++....+.+.-...+....... ..+.|+++|.. +..+...+
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~----~~~~L~~~f~~-la~~~~m~ 80 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVI----PLASLRTGFGV-IAAKFTMG 80 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCC----CHHHHHHHHHH-HHHHTTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCC----CHHHHHHHHHH-HHHHcCCE
Confidence 47899999999999999999999999999999876433445544333333221111 24567777643 44443333
Q ss_pred --eecCCCCceeeeeeeEEEEeCCCccHHHHHHHHHHhCCceE
Q 019269 256 --VVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDICI 296 (343)
Q Consensus 256 --~~~~~~~~~v~~~~~ieV~~~DrpGLL~~I~~~l~~~gi~I 296 (343)
+.....+. .|-|....+..-|.++-....+-.+++
T Consensus 81 ~~l~~~~~~~------ri~vl~Sg~g~nl~~ll~~~~~g~l~~ 117 (288)
T 3obi_A 81 WHMRDRETRR------KVMLLVSQSDHCLADILYRWRVGDLHM 117 (288)
T ss_dssp EEEEETTSCE------EEEEEECSCCHHHHHHHHHHHTTSSCE
T ss_pred EEeeccCCCc------EEEEEEcCCCCCHHHHHHHHHCCCCCe
Confidence 22221111 344555555567777777776655543
No 18
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.59 E-value=0.003 Score=58.41 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=47.6
Q ss_pred CCEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEec-CCCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 39 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTT-PDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 39 ~~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~-~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
...+.|+|.|+||||+.+++++.|+.+|+||.+++.++. ..|++.-...+..+. ...+.|++.|..
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~------~~~~~L~~~f~~ 71 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPV------AGVNDFNSAFGK 71 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC---------CHHHHHHHH
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCC------CCHHHHHHHHHH
Confidence 346899999999999999999999999999999999853 367665444443221 123366666654
No 19
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.57 E-value=0.0058 Score=51.63 Aligned_cols=110 Identities=18% Similarity=0.256 Sum_probs=72.4
Q ss_pred CCEEEEEEEE-cCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhccccc
Q 019269 39 SDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMI 117 (343)
Q Consensus 39 ~~~~~I~V~~-~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~~ 117 (343)
.+...|+|.+ +|+||.++++..+|+.+|+||.--......+|..--.|.|.. ...++..+.|++ +..+.
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~--------~~~~~a~~~l~~-~~~~l- 92 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPR--------GDYKQTLEILSE-RQDSI- 92 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECG--------GGHHHHHHHHHH-SSTTT-
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEec--------hHHHHHHHHHHH-HHHHc-
Confidence 4567888885 999999999999999999999844332222454434566643 112333344444 21110
Q ss_pred ccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEECC---cccHHHHHH
Q 019269 118 SCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQD---HKGLLYDIM 194 (343)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~D---rpGLl~~i~ 194 (343)
. ...+.+. .+...+.|.+.+ +||+++++.
T Consensus 93 ---------------------~-----------------------~~~i~~~----~~~a~vsvvG~~m~~~~Gv~a~i~ 124 (167)
T 2re1_A 93 ---------------------G-----------------------AASIDGD----DTVCKVSAVGLGMRSHVGVAAKIF 124 (167)
T ss_dssp ---------------------T-----------------------CSEEEEE----SSEEEEEEECSSCTTCCCHHHHHH
T ss_pred ---------------------C-----------------------CceEEec----CCEEEEEEECCCcCCCcCHHHHHH
Confidence 0 0122322 356789999977 999999999
Q ss_pred HHHHhCCeeEEE
Q 019269 195 RTLKDYNIQVSY 206 (343)
Q Consensus 195 ~~L~~~glnI~~ 206 (343)
.+|++.|+||..
T Consensus 125 ~aL~~~~InI~~ 136 (167)
T 2re1_A 125 RTLAEEGINIQM 136 (167)
T ss_dssp HHHHHTTCCCCE
T ss_pred HHHHHCCCcEEE
Confidence 999999999986
No 20
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.56 E-value=0.003 Score=58.80 Aligned_cols=67 Identities=13% Similarity=0.132 Sum_probs=46.3
Q ss_pred CeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHH
Q 019269 175 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLW 245 (343)
Q Consensus 175 ~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~ 245 (343)
..++|+|.|+|||||+++|+++|+++|+||.+++-++....+.+.-...+..++... ..+.|+++|.
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~----~~~~L~~~l~ 87 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPF----DLDGFREAFT 87 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSS----CHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCC----CHHHHHHHHH
Confidence 457899999999999999999999999999999877422245544333333211111 2356777664
No 21
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.52 E-value=0.004 Score=57.49 Aligned_cols=66 Identities=15% Similarity=0.119 Sum_probs=49.5
Q ss_pred CEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEec-CCCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 40 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTT-PDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 40 ~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~-~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
..+.|+|.|+||||+.+++++.|+++|+||.+.+.++. ..|++.-...+..+. ....+.|++.|..
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-----~~~~~~L~~~f~~ 73 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-----DFDEAGFRAGLAE 73 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-----SCCHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-----CCCHHHHHHHHHH
Confidence 45789999999999999999999999999999999853 256664444444322 1235677777765
No 22
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.51 E-value=0.00055 Score=63.74 Aligned_cols=68 Identities=16% Similarity=0.158 Sum_probs=50.2
Q ss_pred CCEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecC-CCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 39 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP-DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 39 ~~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~-~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
...++|+|.|+||||+.+++++.|+.+|+||.+++.++.. .|++.-...+..+.+ ....+.|++.|..
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~----~~~~~~L~~~l~~ 88 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL----PFDLDGFREAFTP 88 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS----SSCHHHHHHHHHH
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC----CCCHHHHHHHHHH
Confidence 3457899999999999999999999999999999998743 576655444443211 1235677777755
No 23
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.48 E-value=0.0055 Score=56.73 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=37.4
Q ss_pred CeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEE
Q 019269 175 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEI 219 (343)
Q Consensus 175 ~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~ 219 (343)
..++|++.|+||||++++|+++|+++|+||.+++-++....+.+.
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ff 53 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFF 53 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceE
Confidence 357899999999999999999999999999998876433344544
No 24
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.47 E-value=0.0049 Score=57.07 Aligned_cols=70 Identities=14% Similarity=0.221 Sum_probs=48.9
Q ss_pred CCEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEec-CCCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 39 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTT-PDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 39 ~~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~-~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
...++|+|.|+||||+.+++++.|+++|+||.+++.++. ..|++.-...+..+... .....+.|++.|..
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~--~~~~~~~L~~~f~~ 78 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDA--DALRVDALRREFEP 78 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC------CCHHHHHHHHHH
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcc--cCCCHHHHHHHHHH
Confidence 446799999999999999999999999999999999853 25666444333322000 01234677777755
No 25
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.39 E-value=0.0018 Score=54.86 Aligned_cols=111 Identities=14% Similarity=0.133 Sum_probs=69.6
Q ss_pred CCeEEEEEEE-CCcccHHHHHHHHHHhCCeeEEEEEEEEee--cCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcC
Q 019269 174 PGHTLVQIVC-QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQ--RGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ 250 (343)
Q Consensus 174 ~~~t~i~V~~-~DrpGLl~~i~~~L~~~glnI~~A~i~t~t--~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~ 250 (343)
.+.+.|+|.+ +|+||.++++.++|++.|+||....... + +.+...-.|.+..+ +.++..++-+++...+..
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~-~~~~~g~~~isf~V~~~-----d~~~a~~~L~~~~~~~~~ 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGV-PGHDPSRQQMAFTVKKD-----FAQEALEALEPVLAEIGG 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCC-CCSCTTEEEEEEEEEGG-----GHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCC-CCCCCCceEEEEEEehH-----HHHHHHHHHHHHHHHhCC
Confidence 3567777776 8999999999999999999998433211 1 01233345776531 111222222223333331
Q ss_pred CcceeeecCCCCceeeeeeeEEEEeCC---CccHHHHHHHHHHhCCceEEEEE
Q 019269 251 PLRVTVVSRGPDTELLVANPVELSGKG---RPLVFHDITLALKMLDICIFSAE 300 (343)
Q Consensus 251 ~~~~~~~~~~~~~~v~~~~~ieV~~~D---rpGLL~~I~~~l~~~gi~I~~Ak 300 (343)
.+.+ ... + ..+.|.|.+ +||+++++.++|++.||||....
T Consensus 88 --~v~~-~~~----~---a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is 130 (167)
T 2dt9_A 88 --EAIL-RPD----I---AKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA 130 (167)
T ss_dssp --EEEE-ECS----E---EEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE
T ss_pred --cEEE-eCC----E---EEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE
Confidence 2211 111 1 368888885 99999999999999999997654
No 26
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.34 E-value=0.0031 Score=53.98 Aligned_cols=109 Identities=19% Similarity=0.148 Sum_probs=68.4
Q ss_pred CeEEEEEE-ECCcccHHHHHHHHHHhCCeeEEEEEEEEee-cCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCc
Q 019269 175 GHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQ-RGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPL 252 (343)
Q Consensus 175 ~~t~i~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t-~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~ 252 (343)
+.+.|+|. .+|+||.+++|.+.|++.|+||......+.. .++...-.|.+.. +..++..+.|.+ +..+.
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~-~~~~~ 84 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR--------SDGRRAMEILKK-LQVQG 84 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH--------HHHHHHHHHHHT-TTTTT
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc--------ccHHHHHHHHHH-HHHhc
Confidence 46777774 6999999999999999999999844322100 0112222366542 122333333332 22222
Q ss_pred ceeeecCCCCceeeee---eeEEEEeC---CCccHHHHHHHHHHhCCceEEEEE
Q 019269 253 RVTVVSRGPDTELLVA---NPVELSGK---GRPLVFHDITLALKMLDICIFSAE 300 (343)
Q Consensus 253 ~~~~~~~~~~~~v~~~---~~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~Ak 300 (343)
.. ..+.+. ..|.|.|. ++||+++++.++|++.||||....
T Consensus 85 ~~--------~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is 130 (178)
T 2dtj_A 85 NW--------TNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 130 (178)
T ss_dssp TC--------SEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CC--------CeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 21 111111 36777776 899999999999999999998854
No 27
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.21 E-value=0.0018 Score=54.85 Aligned_cols=64 Identities=17% Similarity=0.158 Sum_probs=51.8
Q ss_pred EEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCC-CEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 41 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD-GKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 41 ~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~-g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
...|.|.+.|+||+|++++++|+..|+||.+..+....+ |...-+|.|.. +...++++.+.|.+
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~------d~~~leqI~kqL~K 67 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG------DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec------cHHHHHHHHHHHcC
Confidence 357899999999999999999999999999999986654 77766777762 24566777777776
No 28
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.13 E-value=0.0019 Score=54.80 Aligned_cols=64 Identities=6% Similarity=0.094 Sum_probs=49.1
Q ss_pred eEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeec-CCEEEEEEEEecCCCCCCChHHHHHHHHHHHH
Q 019269 176 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR-GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWM 246 (343)
Q Consensus 176 ~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~-g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~ 246 (343)
...|+|.+.|+||+|++|+++|++.|+||.+..+.. +. .+...-+|.+.. ++..+++|.+.|.+
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~-t~d~~~sriti~V~~------d~~~leqI~kqL~K 67 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAP-TDDPTLSRMTIQTVG------DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEE-CSCSSEEEEEEEEES------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeee-cCCCCEEEEEEEEec------cHHHHHHHHHHHcC
Confidence 357899999999999999999999999999888864 33 355555566651 24567788877754
No 29
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.08 E-value=0.089 Score=53.40 Aligned_cols=197 Identities=13% Similarity=0.112 Sum_probs=113.7
Q ss_pred CCEEEEEEEE-cCCCcHHHHHHHHHHhCCCeEEEEEEEec--CCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhccc
Q 019269 39 SDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTT--PDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 115 (343)
Q Consensus 39 ~~~~~I~V~~-~Dr~GLl~~i~~~L~~~glnI~~A~i~T~--~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~ 115 (343)
.+.+.|+|.. ++.+|.++++...|+.+|+||. -|.+. .+|..--.|.|.. ...++..+.|++ +..+
T Consensus 268 ~~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd--~I~qs~~~~~~~~Isftv~~--------~~~~~a~~~l~~-~~~e 336 (600)
T 3l76_A 268 ADQAKVALLRVPDRPGVASKLFRDIAQQQVDID--LIIQSIHDGNSNDIAFTVVK--------DLLNTAEAVTSA-IAPA 336 (600)
T ss_dssp CCCEEEEEEEEECSTTHHHHHHHHHHHTTCCCC--CEEBCCCBTTEEEEEEEECG--------GGHHHHHHHHHH-HGGG
T ss_pred CCEEEEEEeCCCCcccHHHHHHHHHHHcCCCEE--EEEeeccCCCCceEEEEEeH--------HHHHHHHHHHHH-HHHH
Confidence 3445566654 8999999999999999999996 33332 2454444566643 122333333443 2211
Q ss_pred ccccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEEC---CcccHHHH
Q 019269 116 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYD 192 (343)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~---DrpGLl~~ 192 (343)
. . ..+.. .....|.++ .+...|.|.+. .+||+.++
T Consensus 337 l------------~-------~~~~~-------------------~~~~~v~~~----~~~a~VsvVG~gm~~~~Gv~a~ 374 (600)
T 3l76_A 337 L------------R-------SYPEA-------------------DQEAEIIVE----KGIAKIAIAGAGMIGRPGIAAK 374 (600)
T ss_dssp G------------S-------SSTTC-------------------SSSSEEEEE----CSEEEEEEECGGGTTCTTHHHH
T ss_pred h------------h-------ccccc-------------------cCcceeEec----CCeEEEEEECCCcccCccHHHH
Confidence 1 0 00000 001234443 35678899886 78999999
Q ss_pred HHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcceee-----ecCCCCceeee
Q 019269 193 IMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRVTV-----VSRGPDTELLV 267 (343)
Q Consensus 193 i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~~~~-----~~~~~~~~v~~ 267 (343)
+..+|++.|+||... .+ .. . --.|.+.. +..++..+.|.+.+........ .....-+-+..
T Consensus 375 if~aL~~~~Ini~~i--st--Se-~-~Is~vI~~--------~d~~~Av~aLh~~f~~~~t~~~~~~~~~~~~~v~Gia~ 440 (600)
T 3l76_A 375 MFKTLADVGVNIEMI--ST--SE-V-KVSCVIDQ--------RDADRAIAALSNAFGVTLSPPKNQTDTSHLPAVRGVAL 440 (600)
T ss_dssp HHHHHHHTTCCCCEE--EE--CS-S-EEEEEEEG--------GGHHHHHHHHHHHTTCCBCCCCCCCC---CCSCCEEEE
T ss_pred HHHHHHhCCCcEEEE--ec--CC-C-EEEEEEcH--------HHHHHHHHHHHHhhcccCCCccccccccccCceEEEEe
Confidence 999999999999843 33 22 2 22255542 2234444566666643211000 00000022222
Q ss_pred e---eeEEEE-eCCCccHHHHHHHHHHhCCceEEEEEee
Q 019269 268 A---NPVELS-GKGRPLVFHDITLALKMLDICIFSAEIG 302 (343)
Q Consensus 268 ~---~~ieV~-~~DrpGLL~~I~~~l~~~gi~I~~AkI~ 302 (343)
+ ..|.|. .+|+||+.++|-..|++.||||....-+
T Consensus 441 ~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~ 479 (600)
T 3l76_A 441 DQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQS 479 (600)
T ss_dssp ECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEE
T ss_pred eCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEec
Confidence 2 244443 4799999999999999999999766554
No 30
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.02 E-value=0.16 Score=51.57 Aligned_cols=199 Identities=18% Similarity=0.218 Sum_probs=117.4
Q ss_pred CCCEEEEEEEEc---CCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhcc
Q 019269 38 PSDVFLLKLSCY---DRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGN 114 (343)
Q Consensus 38 ~~~~~~I~V~~~---Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~ 114 (343)
..+...|.|++. +.||+.+++..+|...|+||. -|++. ..- -.|.|. ++..++.-+.|.+.+..
T Consensus 352 ~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~--~istS--e~~-Is~vI~--------~~d~~~Av~aLh~~f~~ 418 (600)
T 3l76_A 352 EKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIE--MISTS--EVK-VSCVID--------QRDADRAIAALSNAFGV 418 (600)
T ss_dssp ECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCC--EEEEC--SSE-EEEEEE--------GGGHHHHHHHHHHHTTC
T ss_pred cCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEE--EEecC--CCE-EEEEEc--------HHHHHHHHHHHHHhhcc
Confidence 467789999985 789999999999999999998 33453 222 224443 33344555566666632
Q ss_pred cccccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEE-ECCcccHHHHH
Q 019269 115 AMISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIV-CQDHKGLLYDI 193 (343)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~-~~DrpGLl~~i 193 (343)
... + .. . .....+ ...=.-|..+ .+.+.|+|. .+|+||+.++|
T Consensus 419 ~~t-~-------~~-------~--~~~~~~---------------~~~v~Gia~~----~~~a~i~i~~~~~~~g~~~~i 462 (600)
T 3l76_A 419 TLS-P-------PK-------N--QTDTSH---------------LPAVRGVALD----QDQAQIAIRHVPDRPGMAAQL 462 (600)
T ss_dssp CBC-C-------CC-------C--CCC------------------CCSCCEEEEE----CSEEEEEEEEEESSTTHHHHH
T ss_pred cCC-C-------cc-------c--cccccc---------------cCceEEEEee----CCEEEEEEecCCCCccHHHHH
Confidence 110 0 00 0 000000 0011234443 345666664 59999999999
Q ss_pred HHHHHhCCeeEEEEEEEEeec--CC--EEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcceeeecCCCCceeeee-
Q 019269 194 MRTLKDYNIQVSYGRFSRRQR--GN--CEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRVTVVSRGPDTELLVA- 268 (343)
Q Consensus 194 ~~~L~~~glnI~~A~i~t~t~--g~--~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~~~~~~~~~~~~~~v~~~- 268 (343)
.+.|++.|+||-.-....... .+ ...-+|.+.. +..++..+.|.+ +...+.. .++.+.
T Consensus 463 f~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~--------~d~~~a~~~l~~-~~~~~~~--------~~v~~~~ 525 (600)
T 3l76_A 463 FTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE--------GDSSQAEAILQP-LIKDWLD--------AAIVVNK 525 (600)
T ss_dssp HHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH--------HHHHHHHHHHHH-HTTTSTT--------CEEEEEC
T ss_pred HHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH--------HHHHHHHHHHHH-HHHhcCC--------ceEEEeC
Confidence 999999999996332221111 12 2233466642 123333344433 3332221 112211
Q ss_pred --eeEEEEeC---CCccHHHHHHHHHHhCCceEEEEEee
Q 019269 269 --NPVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 302 (343)
Q Consensus 269 --~~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~AkI~ 302 (343)
..|.|.+. .+||+.+++-++|++.||||.....+
T Consensus 526 ~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mistS 564 (600)
T 3l76_A 526 AIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIATS 564 (600)
T ss_dssp CEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEEEC
T ss_pred CeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEEcC
Confidence 36788874 99999999999999999999887755
No 31
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.99 E-value=0.0028 Score=53.75 Aligned_cols=64 Identities=14% Similarity=0.164 Sum_probs=51.7
Q ss_pred EEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecC-CCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 41 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP-DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 41 ~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~-~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
...|.|...|+||.|++++++|+..|+||.+..+.... .|..--+|.|.. ++..+++|.+.|.+
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~------d~~~leql~kQL~K 68 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG------PDEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec------cHHHHHHHHHHhcC
Confidence 35789999999999999999999999999999987655 477766777753 24566777777776
No 32
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.94 E-value=0.0021 Score=54.47 Aligned_cols=66 Identities=5% Similarity=0.072 Sum_probs=49.4
Q ss_pred eEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHH
Q 019269 176 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWME 247 (343)
Q Consensus 176 ~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~ 247 (343)
...|+|...|+||+|++|+++|+++|+||.+..+......+...-+|.+.. ++..+++|.+.|.+.
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~------d~~~leql~kQL~Kl 69 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG------PDEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec------cHHHHHHHHHHhcCC
Confidence 357899999999999999999999999999888864222355655566652 245677787777543
No 33
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=96.85 E-value=0.028 Score=47.96 Aligned_cols=110 Identities=22% Similarity=0.241 Sum_probs=70.8
Q ss_pred CCEEEEEEE-EcCCCcHHHHHHHHHHhCCCeEEEEEEEecC--CCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhccc
Q 019269 39 SDVFLLKLS-CYDRKGLLYDVTAVLCELELTIEKVKISTTP--DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 115 (343)
Q Consensus 39 ~~~~~I~V~-~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~--~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~ 115 (343)
.+.+.|+|. .+|+||.++++...|+.+|+||.---..+.. +|..--.|.+.. ...++..+.|++ +..+
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~-~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR--------SDGRRAMEILKK-LQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH--------HHHHHHHHHHHT-TTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc--------ccHHHHHHHHHH-HHHh
Confidence 466778884 5999999999999999999999843333221 332222365542 222333333433 2111
Q ss_pred ccccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEEC---CcccHHHH
Q 019269 116 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYD 192 (343)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~---DrpGLl~~ 192 (343)
. . ...+.+. .+...|.|.|. ++||++++
T Consensus 84 ~----------------------~-----------------------~~~v~~~----~~~a~VsvVG~gm~~~~Gv~ar 114 (178)
T 2dtj_A 84 G----------------------N-----------------------WTNVLYD----DQVGKVSLVGAGMKSHPGVTAE 114 (178)
T ss_dssp T----------------------T-----------------------CSEEEEE----SCEEEEEEEEECCTTCHHHHHH
T ss_pred c----------------------C-----------------------CCeEEEe----CCeEEEEEEcCCcccCccHHHH
Confidence 0 0 0123332 34678888886 89999999
Q ss_pred HHHHHHhCCeeEEE
Q 019269 193 IMRTLKDYNIQVSY 206 (343)
Q Consensus 193 i~~~L~~~glnI~~ 206 (343)
+.++|++.|+||..
T Consensus 115 if~aLa~~~InI~~ 128 (178)
T 2dtj_A 115 FMEALRDVNVNIEL 128 (178)
T ss_dssp HHHHHHHTTCCCCE
T ss_pred HHHHHHHCCCCEEE
Confidence 99999999999985
No 34
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.80 E-value=0.026 Score=47.51 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=70.9
Q ss_pred CCEEEEEEEE-cCCCcHHHHHHHHHHhCCCeEEEEEEEecC----CCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhc
Q 019269 39 SDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTTP----DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILG 113 (343)
Q Consensus 39 ~~~~~I~V~~-~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~----~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~ 113 (343)
.+...|+|.+ +|+||.++++..+|+..|+||.- |.+.. +|..--.|.|... ..++..+.|.+..
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~--I~q~~~~~~~g~~~isf~V~~~--------d~~~a~~~L~~~~- 82 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDM--IIQGVPGHDPSRQQMAFTVKKD--------FAQEALEALEPVL- 82 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSC--EEBCCCCSCTTEEEEEEEEEGG--------GHHHHHHHHHHHH-
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEE--EEcCCCCCCCCceEEEEEEehH--------HHHHHHHHHHHHH-
Confidence 5667888887 89999999999999999999983 33321 2344345666531 1223333343311
Q ss_pred ccccccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEECC---cccHH
Q 019269 114 NAMISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQD---HKGLL 190 (343)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~D---rpGLl 190 (343)
.+. . - .+.++ .+...+.|.|.+ +||++
T Consensus 83 ~~~--------------------------------------------~-~-~v~~~----~~~a~vsvVG~gm~~~~Gv~ 112 (167)
T 2dt9_A 83 AEI--------------------------------------------G-G-EAILR----PDIAKVSIVGVGLASTPEVP 112 (167)
T ss_dssp HHH--------------------------------------------C-C-EEEEE----CSEEEEEEEESSGGGSTHHH
T ss_pred HHh--------------------------------------------C-C-cEEEe----CCEEEEEEECCCcccCcCHH
Confidence 100 0 0 22222 356788999876 99999
Q ss_pred HHHHHHHHhCCeeEE
Q 019269 191 YDIMRTLKDYNIQVS 205 (343)
Q Consensus 191 ~~i~~~L~~~glnI~ 205 (343)
+++..+|++.|+||.
T Consensus 113 a~~f~aL~~~~InI~ 127 (167)
T 2dt9_A 113 AKMFQAVASTGANIE 127 (167)
T ss_dssp HHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHCCCCEE
Confidence 999999999999996
No 35
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.74 E-value=0.19 Score=42.90 Aligned_cols=112 Identities=16% Similarity=0.178 Sum_probs=71.2
Q ss_pred CCEEEEEEEE-cCCCcHHHHHHHHHHhCCCeEEEEEEEecC--CCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhccc
Q 019269 39 SDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTTP--DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 115 (343)
Q Consensus 39 ~~~~~I~V~~-~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~--~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~ 115 (343)
.+...|+|.+ +|+||.++++...|+.+|+||.--...... +|..--.|.|...+ .++..+.|++ +..+
T Consensus 14 ~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~--------~~~a~~~L~~-~~~e 84 (181)
T 3s1t_A 14 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV--------GPAAVEKLDS-LRNE 84 (181)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT--------HHHHHHHHHH-THHH
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH--------HHHHHHHHHH-HHHh
Confidence 4556677754 899999999999999999999732211122 45554567775421 1233333333 1110
Q ss_pred ccccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEEC---CcccHHHH
Q 019269 116 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYD 192 (343)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~---DrpGLl~~ 192 (343)
. ....|.++ .+...|.|.|. ++||+.++
T Consensus 85 l---------------------------------------------~~~~v~~~----~~va~VsvVG~gm~~~~Gvaa~ 115 (181)
T 3s1t_A 85 I---------------------------------------------GFSQLLYD----DHIGKVSLIGAGMRSHPGVTAT 115 (181)
T ss_dssp H---------------------------------------------CCSEEEEE----SCEEEEEEEEECCTTCHHHHHH
T ss_pred c---------------------------------------------CcceEEEe----CCEEEEEEEecccccCchHHHH
Confidence 0 00123332 24567888775 89999999
Q ss_pred HHHHHHhCCeeEEEEE
Q 019269 193 IMRTLKDYNIQVSYGR 208 (343)
Q Consensus 193 i~~~L~~~glnI~~A~ 208 (343)
+.++|++.|+||....
T Consensus 116 ~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 116 FCEALAAVGVNIELIS 131 (181)
T ss_dssp HHHHHHHTTCCCCEEE
T ss_pred HHHHHHHCCCcEEEEE
Confidence 9999999999998443
No 36
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.53 E-value=0.031 Score=47.89 Aligned_cols=113 Identities=17% Similarity=0.114 Sum_probs=68.7
Q ss_pred CeEEEEEE-ECCcccHHHHHHHHHHhCCeeEEEEEEEEeec--CCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCC
Q 019269 175 GHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR--GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 251 (343)
Q Consensus 175 ~~t~i~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~--g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~ 251 (343)
+.+.|+|. .+|+||.+++|..+|++.|+||..-.-.. .. .+...-+|.+..+. .++..++-+.+.+.+. .
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~-s~~~~g~~~isftv~~~~-----~~~a~~~L~~~~~el~-~ 87 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNV-SKVEDGKTDITFTCSRDV-----GPAAVEKLDSLRNEIG-F 87 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECC-CCTTTCEEEEEEEEETTT-----HHHHHHHHHHTHHHHC-C
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecC-CcccCCccEEEEEEehhH-----HHHHHHHHHHHHHhcC-c
Confidence 34555553 58999999999999999999997332111 11 34444557776321 1122222222222231 1
Q ss_pred cceeeecCCCCceeeeeeeEEEEeC---CCccHHHHHHHHHHhCCceEEEEEee
Q 019269 252 LRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 302 (343)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~AkI~ 302 (343)
..+.. .. .+ ..+.|.|. ++||+.+++.++|++.||||.....+
T Consensus 88 ~~v~~-~~----~v---a~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~IstS 133 (181)
T 3s1t_A 88 SQLLY-DD----HI---GKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS 133 (181)
T ss_dssp SEEEE-ES----CE---EEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred ceEEE-eC----CE---EEEEEEecccccCchHHHHHHHHHHHCCCcEEEEEcC
Confidence 11111 01 11 25677766 89999999999999999999887643
No 37
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.45 E-value=0.014 Score=50.59 Aligned_cols=66 Identities=12% Similarity=0.233 Sum_probs=50.7
Q ss_pred CEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCC-CEEEEEEEEecCCCcccchhHHHHHHHHHHHH
Q 019269 40 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD-GKVMDLFFVTDTRELLHTRKRKEDTYEHLKTI 111 (343)
Q Consensus 40 ~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~-g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~ 111 (343)
....|+|...|+||.|++++++|+..|+||.+-.+..+.+ |..--++.|... +..+++|.+.|.+.
T Consensus 28 m~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~KL 94 (193)
T 2fgc_A 28 REHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYKL 94 (193)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTTS
T ss_pred eEEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcCc
Confidence 3568999999999999999999999999999877764444 666666777532 33466777777663
No 38
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.41 E-value=0.01 Score=51.39 Aligned_cols=65 Identities=8% Similarity=0.194 Sum_probs=46.8
Q ss_pred eEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHH
Q 019269 176 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWM 246 (343)
Q Consensus 176 ~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~ 246 (343)
...|+|...|+||.|++|+++|++.|+||.+..+......+...-++.+..+ +...++|.+.|.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcC
Confidence 4689999999999999999999999999998777531233455545566522 2245667666543
No 39
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.37 E-value=0.0042 Score=52.24 Aligned_cols=36 Identities=22% Similarity=0.177 Sum_probs=33.3
Q ss_pred eEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccC
Q 019269 270 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIG 307 (343)
Q Consensus 270 ~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g 307 (343)
.|+|.|.||+|+|++|+.+|+++++||..+.+. +.|
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~--~~g 37 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEID--PIG 37 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEE--TTT
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEe--cCC
Confidence 478999999999999999999999999999998 553
No 40
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.36 E-value=0.028 Score=49.03 Aligned_cols=115 Identities=17% Similarity=0.119 Sum_probs=68.9
Q ss_pred CCeEEEEEE-ECCcccHHHHHHHHHHhCCeeEEEEEEEEee-cCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCC
Q 019269 174 PGHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQ-RGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 251 (343)
Q Consensus 174 ~~~t~i~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t-~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~ 251 (343)
.+.+.|+|. .+|+||+.++|...|++.|+||-.-.-..+. ..+...-.|.+..+ +.++...+.+.+...+...
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~-----d~~~~~~~l~~~~~~~~~~ 107 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-----VGPAAVEKLDSLRNEIGFS 107 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG-----GHHHHHHHHHTTHHHHCCS
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh-----hHHHHHHHHHHHHhhhcee
Confidence 356777776 5999999999999999999999833211101 12244445666521 1112222222222333211
Q ss_pred cceeeecCCCCceeeeeeeEEEEeC---CCccHHHHHHHHHHhCCceEEEEEee
Q 019269 252 LRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 302 (343)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~AkI~ 302 (343)
.+.. . ..+ ..+.|.+. .+||+.+++-.+|++.||||.....+
T Consensus 108 -~v~~-~----~~i---akVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIstS 152 (200)
T 4go7_X 108 -QLLY-D----DHI---GKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS 152 (200)
T ss_dssp -EEEE-E----CCE---EEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEEEC
T ss_pred -eEEE-e----cCe---eeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEEcc
Confidence 1100 0 111 24556554 89999999999999999999987644
No 41
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.16 E-value=0.013 Score=51.44 Aligned_cols=62 Identities=23% Similarity=0.269 Sum_probs=44.1
Q ss_pred EEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecC----CCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 41 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP----DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 41 ~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~----~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
...|.|.+.||||+|++++.+|++++.||...+..+.. +|.+.-.+.+.+. .++++-+.|++
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~--------~Le~LL~kLrk 69 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGG--------DFEKILERVKT 69 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSS--------CHHHHHHHHHT
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCC--------CHHHHHHHHhC
Confidence 45789999999999999999999999999999998866 6776655555431 34555555554
No 42
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.02 E-value=0.1 Score=45.41 Aligned_cols=109 Identities=15% Similarity=0.192 Sum_probs=69.2
Q ss_pred CCCEEEEEEEE-cCCCcHHHHHHHHHHhCCCeEEEEEEEec----CCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHh
Q 019269 38 PSDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTT----PDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTIL 112 (343)
Q Consensus 38 ~~~~~~I~V~~-~Dr~GLl~~i~~~L~~~glnI~~A~i~T~----~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l 112 (343)
..+...|+|.+ +|+||+.+++.+.|++.|+||- -|.+. .++.....|.+... ..++....|.+..
T Consensus 32 ~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVD--mI~Qs~s~~~~~~~~~sftv~~~--------d~~~~~~~l~~~~ 101 (200)
T 4go7_X 32 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNID--MVLQNVSKVEDGKTDITFTCSRD--------VGPAAVEKLDSLR 101 (200)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCC--CEECCCCC--CCEEEEEEEEEGG--------GHHHHHHHHHTTH
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceE--EEeeccccccccceEEEEecchh--------hHHHHHHHHHHHH
Confidence 45567788875 9999999999999999999997 34332 23455445766531 1223322232211
Q ss_pred cccccccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEE---CCcccH
Q 019269 113 GNAMISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVC---QDHKGL 189 (343)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~---~DrpGL 189 (343)
.+. ....+.++ .+...|.|.+ +.+||+
T Consensus 102 -~~~---------------------------------------------~~~~v~~~----~~iakVSvVG~GM~~~~GV 131 (200)
T 4go7_X 102 -NEI---------------------------------------------GFSQLLYD----DHIGKVSLIGAGMRSHPGV 131 (200)
T ss_dssp -HHH---------------------------------------------CCSEEEEE----CCEEEEEEEEESCTTCHHH
T ss_pred -hhh---------------------------------------------ceeeEEEe----cCeeeeeeeccccccCCCc
Confidence 000 00122222 2344566655 788999
Q ss_pred HHHHHHHHHhCCeeEEE
Q 019269 190 LYDIMRTLKDYNIQVSY 206 (343)
Q Consensus 190 l~~i~~~L~~~glnI~~ 206 (343)
.+++..+|++.|+||..
T Consensus 132 aak~F~aLa~~~INI~m 148 (200)
T 4go7_X 132 TATFCEALAAVGVNIEL 148 (200)
T ss_dssp HHHHHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHCCCCEEE
Confidence 99999999999999993
No 43
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.97 E-value=0.093 Score=50.84 Aligned_cols=108 Identities=19% Similarity=0.155 Sum_probs=69.2
Q ss_pred CeEEEEEE-ECCcccHHHHHHHHHHhCCeeEEEEEEEEeec--CCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCC
Q 019269 175 GHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR--GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 251 (343)
Q Consensus 175 ~~t~i~V~-~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~--g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~ 251 (343)
+.+.|+|. .+|+||.+++|.+.|+++|+||......+ .. .+...-.|.+..+ +.++ ..+.|.+ +..+
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~-s~~~~g~~~isf~v~~~-----~~~~---a~~~l~~-~~~~ 332 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV-FSVEDGTTDITFTCPRS-----DGRR---AMEILKK-LQVQ 332 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECC-CC--CCEEEEEEEEETT-----THHH---HHHHHHH-HHTT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccC-ccccCCcceEEEEEech-----hHHH---HHHHHHH-HHHH
Confidence 45678887 58999999999999999999998543222 21 2333444666531 1222 2233322 2222
Q ss_pred cceeeecCCCCceeeee---eeEEEEeC---CCccHHHHHHHHHHhCCceEEEEE
Q 019269 252 LRVTVVSRGPDTELLVA---NPVELSGK---GRPLVFHDITLALKMLDICIFSAE 300 (343)
Q Consensus 252 ~~~~~~~~~~~~~v~~~---~~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~Ak 300 (343)
+.. ..+.+. ..+.|.+. ++||+++++..+|.+.||||....
T Consensus 333 ~~~--------~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is 379 (421)
T 3ab4_A 333 GNW--------TNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 379 (421)
T ss_dssp TTC--------SEEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEE
T ss_pred cCC--------ceEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 221 111111 26788876 899999999999999999998654
No 44
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.91 E-value=0.011 Score=52.07 Aligned_cols=39 Identities=15% Similarity=0.031 Sum_probs=30.2
Q ss_pred eEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCc
Q 019269 270 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGD 308 (343)
Q Consensus 270 ~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~ 308 (343)
.|.|.+.||||+|++|+.+|+++++||...+..++..|+
T Consensus 6 tL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~ 44 (223)
T 1y7p_A 6 GLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGE 44 (223)
T ss_dssp EEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSST
T ss_pred EEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCC
Confidence 689999999999999999999999999999999333333
No 45
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.50 E-value=1.2 Score=43.03 Aligned_cols=109 Identities=22% Similarity=0.237 Sum_probs=71.0
Q ss_pred CCEEEEEEE-EcCCCcHHHHHHHHHHhCCCeEEEEEEEecC--CCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhccc
Q 019269 39 SDVFLLKLS-CYDRKGLLYDVTAVLCELELTIEKVKISTTP--DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 115 (343)
Q Consensus 39 ~~~~~I~V~-~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~--~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~ 115 (343)
.+.+.|+|. .+|+||.++++...|+.+|+||.--...+.. +|..--.|.|... +. ++..+.|++ +..+
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-----~~---~~a~~~l~~-~~~~ 332 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-----DG---RRAMEILKK-LQVQ 332 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-----TH---HHHHHHHHH-HHTT
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-----hH---HHHHHHHHH-HHHH
Confidence 345678887 5999999999999999999999843322322 3544445766542 11 222333433 2111
Q ss_pred ccccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEEC---CcccHHHH
Q 019269 116 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYD 192 (343)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~---DrpGLl~~ 192 (343)
. . ...|.++ .+...+.|.+. +.||++++
T Consensus 333 ~----------------------~-----------------------~~~v~~~----~~~a~vsvVG~gm~~~~Gv~a~ 363 (421)
T 3ab4_A 333 G----------------------N-----------------------WTNVLYD----DQVGKVSLVGAGMKSHPGVTAE 363 (421)
T ss_dssp T----------------------T-----------------------CSEEEEE----CCEEEEEEECGGGTSCTTHHHH
T ss_pred c----------------------C-----------------------CceEEEe----CCeEEEEEEccCcccCccHHHH
Confidence 0 0 0123332 34678888885 78999999
Q ss_pred HHHHHHhCCeeEE
Q 019269 193 IMRTLKDYNIQVS 205 (343)
Q Consensus 193 i~~~L~~~glnI~ 205 (343)
+..+|++.|+||.
T Consensus 364 ~f~aL~~~~InI~ 376 (421)
T 3ab4_A 364 FMEALRDVNVNIE 376 (421)
T ss_dssp HHHHHHHTTCCCC
T ss_pred HHHHHHHCCCCEE
Confidence 9999999999999
No 46
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.30 E-value=0.064 Score=44.75 Aligned_cols=59 Identities=15% Similarity=0.303 Sum_probs=43.1
Q ss_pred EEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 43 LLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 43 ~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
.|.|.|.||+|++++|+.+|+.+++||....+.+. |. +++.-+. .+.+.+..+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~--g~----i~~~~~~---~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI--GR----IYLNFAE---LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT--TE----EEEEECC---CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC--CE----EEEEEEe---CCHHHHHHHHHHHHc
Confidence 58899999999999999999999999999998663 64 2232221 234445666665555
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.92 E-value=0.21 Score=49.19 Aligned_cols=105 Identities=14% Similarity=0.105 Sum_probs=68.7
Q ss_pred CeEEEEEEE---CCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHH---
Q 019269 175 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMEL--- 248 (343)
Q Consensus 175 ~~t~i~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L--- 248 (343)
+.+.|+|.+ .++||+++++..+|+++|+||......+ +. ..-+|.|..+ ..++..+.|.+.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~t---se-~~Is~~V~~~--------d~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGS---SE-TNISLVVSEE--------DVDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECC---TT-CCEEEEEEGG--------GHHHHHHHHHHHHCC-
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecC---CC-CEEEEEEech--------HHHHHHHHHHHHHhhh
Confidence 467888886 6788999999999999999998443222 12 2223666521 1234445555555
Q ss_pred -----cCCcceeeecCCCCceeeee---eeEEEEeC---CCccHHHHHHHHHHhCCceEEEE
Q 019269 249 -----LQPLRVTVVSRGPDTELLVA---NPVELSGK---GRPLVFHDITLALKMLDICIFSA 299 (343)
Q Consensus 249 -----~~~~~~~~~~~~~~~~v~~~---~~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~A 299 (343)
..+... ..+.+. ..+.|.+. ++||+++++..+|.+.||||...
T Consensus 385 ~~~~~~~~~~~--------~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mi 438 (473)
T 3c1m_A 385 GKKSFLNNNLI--------RDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMI 438 (473)
T ss_dssp ---CTTSCCCE--------EEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEE
T ss_pred ccccccccccc--------ceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEE
Confidence 221101 112221 36788886 69999999999999999999554
No 48
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=93.48 E-value=0.26 Score=49.13 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=43.1
Q ss_pred CCeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEe
Q 019269 174 PGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ 225 (343)
Q Consensus 174 ~~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~ 225 (343)
..+..|.+.-+|+||.+..|+..|.++|+||.+.++.....|+.++-.+.++
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd 503 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLD 503 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEES
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEEC
Confidence 4567888899999999999999999999999999998544567777555554
No 49
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=92.56 E-value=0.58 Score=45.62 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=68.5
Q ss_pred CeEEEEEEE---CCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCC
Q 019269 175 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 251 (343)
Q Consensus 175 ~~t~i~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~ 251 (343)
+.+.|+|.+ .+.||++++|..+|+++|+||.. |.+ .. . .-+|.+..+.. . +..+.+.+.|...+..
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~--i~~-~~-~--~is~~V~~~d~--~--~~~~~~~~el~~~~~~- 365 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEH--MPS-GV-D--SVSLVIEDCKL--D--GKCDKIIEEIKKQCNP- 365 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEE--BCE-ET-T--EEEEEEEHHHH--T--TTHHHHHHHHHHHSCC-
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEE--Eec-CC-C--EEEEEEecchH--H--HHHHHHHHHHHHhcCC-
Confidence 456788886 68999999999999999999983 332 12 1 22366652111 0 0223444444443321
Q ss_pred cceeeecCCCCceeeee---eeEEEEeC---CCccHHHHHHHHHHhCCceEEEEE
Q 019269 252 LRVTVVSRGPDTELLVA---NPVELSGK---GRPLVFHDITLALKMLDICIFSAE 300 (343)
Q Consensus 252 ~~~~~~~~~~~~~v~~~---~~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~Ak 300 (343)
.++.+. ..|.|.|. .+||+.+++..+|++.||||....
T Consensus 366 -----------~~v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 366 -----------DSIEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp -----------SEEEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred -----------CcEEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 111111 36788876 699999999999999999998865
No 50
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=92.00 E-value=0.51 Score=46.98 Aligned_cols=62 Identities=16% Similarity=0.167 Sum_probs=46.6
Q ss_pred eeEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCCchHHHHHHHH
Q 019269 269 NPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRNKIEEGVWK 337 (343)
Q Consensus 269 ~~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~~~~~~~~l~~ 337 (343)
+.+-+.-.|+||.+..|+..|.++||||.+.++.+...|+.+.=+ +.+ ..+++++ ..++|++
T Consensus 455 ~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~--i~v----d~~~~~~-~l~~l~~ 516 (529)
T 1ygy_A 455 INLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATIL--LRL----DQDVPDD-VRTAIAA 516 (529)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEE--EEE----SSCCCHH-HHHHHHH
T ss_pred cEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEE--EEE----CCCCCHH-HHHHHhc
Confidence 367788899999999999999999999999999965666665433 322 2345555 5677765
No 51
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.90 E-value=0.46 Score=45.73 Aligned_cols=49 Identities=6% Similarity=0.186 Sum_probs=41.7
Q ss_pred CeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEe
Q 019269 175 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ 225 (343)
Q Consensus 175 ~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~ 225 (343)
+...|.+.-.|+||.+..|+.+|.++|+||...+.. +.|+.+.-++.++
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~--r~g~~A~~vidvD 378 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQ--TSAQMGYVVIDIE 378 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEE--ECSSEEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhcc--CCCCEEEEEEEcC
Confidence 355688899999999999999999999999998887 5788887666665
No 52
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=91.89 E-value=5 Score=39.19 Aligned_cols=115 Identities=14% Similarity=0.199 Sum_probs=69.6
Q ss_pred CCEEEEEEEE---cCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhccc
Q 019269 39 SDVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 115 (343)
Q Consensus 39 ~~~~~I~V~~---~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~ 115 (343)
.+...|+|.+ .++||+.+++..+|+.+|+||.--...+.... -.|.|... ..++..+.|.+.+.+.
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~~---Is~~V~~~--------d~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSETN---ISLVVSEE--------DVDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTCC---EEEEEEGG--------GHHHHHHHHHHHHCC-
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCCE---EEEEEech--------HHHHHHHHHHHHHhhh
Confidence 4556788886 67789999999999999999983332243222 23666531 1234444444434110
Q ss_pred ccccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEEC---CcccHHHH
Q 019269 116 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYD 192 (343)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~---DrpGLl~~ 192 (343)
.+ +.|..+ . .-..|.++ .+...+.|.+. ++||..++
T Consensus 385 -----------------------~~---~~~~~~----------~-~~~~v~~~----~~~a~vsvVG~gm~~~~Gvaak 423 (473)
T 3c1m_A 385 -----------------------GK---KSFLNN----------N-LIRDVSVD----KDVCVISVVGAGMRGAKGIAGK 423 (473)
T ss_dssp -----------------------------CTTSC----------C-CEEEEEEE----EEEEEEEEECTTTTTCTTHHHH
T ss_pred -----------------------cc---cccccc----------c-ccceEEEe----CCcEEEEEEecCCCCChhHHHH
Confidence 00 000000 0 00123333 24567888885 58999999
Q ss_pred HHHHHHhCCeeEE
Q 019269 193 IMRTLKDYNIQVS 205 (343)
Q Consensus 193 i~~~L~~~glnI~ 205 (343)
+..+|++.|+||.
T Consensus 424 ~f~aL~~~~InI~ 436 (473)
T 3c1m_A 424 IFTAVSESGANIK 436 (473)
T ss_dssp HHHHHHHHTCCCC
T ss_pred HHHHHHHCCCCEE
Confidence 9999999999995
No 53
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.77 E-value=1.1 Score=43.13 Aligned_cols=50 Identities=14% Similarity=0.080 Sum_probs=43.9
Q ss_pred CEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEec
Q 019269 40 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTD 90 (343)
Q Consensus 40 ~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~ 90 (343)
+...|.+.-.|+||.+++++.+|.++|+||..-...+ .++.++-++.+..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r-~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT-SAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE-CSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC-CCCEEEEEEEcCC
Confidence 4557888999999999999999999999999999988 7888877777754
No 54
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=91.72 E-value=6.8 Score=38.04 Aligned_cols=105 Identities=16% Similarity=0.225 Sum_probs=65.8
Q ss_pred EEEEEEEE---cCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhccccc
Q 019269 41 VFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMI 117 (343)
Q Consensus 41 ~~~I~V~~---~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~~ 117 (343)
.+.|+|.+ .+.||..+++..+|+.+|+||. -|.+..+. -.|.|...+-. .....+.+.|...+.
T Consensus 298 ~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd--~i~~~~~~---is~~V~~~d~~----~~~~~~~~el~~~~~---- 364 (446)
T 3tvi_A 298 FTVIAIEKALLNSEVGFCRKILSILEMYGVSFE--HMPSGVDS---VSLVIEDCKLD----GKCDKIIEEIKKQCN---- 364 (446)
T ss_dssp EEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEE--EBCEETTE---EEEEEEHHHHT----TTHHHHHHHHHHHSC----
T ss_pred EEEEEEEecCCCccHHHHHHHHHHHHHcCCcEE--EEecCCCE---EEEEEecchHH----HHHHHHHHHHHHhcC----
Confidence 45677775 6899999999999999999997 33343232 23555431000 012222222222111
Q ss_pred ccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEEC---CcccHHHHHH
Q 019269 118 SCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYDIM 194 (343)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~---DrpGLl~~i~ 194 (343)
...|.++. +...|.|.|. ..||+.+++.
T Consensus 365 ---------------------------------------------~~~v~v~~----~vA~VSvVG~gM~~~~Gvaarif 395 (446)
T 3tvi_A 365 ---------------------------------------------PDSIEIHP----NMALVATVGTGMAKTKGIANKIF 395 (446)
T ss_dssp ---------------------------------------------CSEEEEEE----EEEEEEEECGGGSSCTTHHHHHH
T ss_pred ---------------------------------------------CCcEEEeC----CeEEEEEECCCccCChhHHHHHH
Confidence 11233332 3568888875 5899999999
Q ss_pred HHHHhCCeeEEEE
Q 019269 195 RTLKDYNIQVSYG 207 (343)
Q Consensus 195 ~~L~~~glnI~~A 207 (343)
.+|++.|+||...
T Consensus 396 ~aLa~~~InI~mI 408 (446)
T 3tvi_A 396 TALSKENVNIRMI 408 (446)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHCCCCEEEE
Confidence 9999999999843
No 55
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=91.62 E-value=1.2 Score=43.00 Aligned_cols=51 Identities=12% Similarity=0.046 Sum_probs=42.3
Q ss_pred CCCEEEEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEe
Q 019269 38 PSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVT 89 (343)
Q Consensus 38 ~~~~~~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~ 89 (343)
.++...|.+.-+|.||.+.+|..+|+++|+||..-...| .+++++-+.-|.
T Consensus 340 ~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~-~~~~~y~~~d~~ 390 (416)
T 3k5p_A 340 RPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT-DGEVGYLVMEAD 390 (416)
T ss_dssp CSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE-CSSCEEEEEEEC
T ss_pred CCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC-CCceEEEEEEec
Confidence 356789999999999999999999999999999766666 577875555553
No 56
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=91.14 E-value=0.41 Score=43.88 Aligned_cols=52 Identities=10% Similarity=-0.074 Sum_probs=38.7
Q ss_pred eEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCC
Q 019269 270 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLS 325 (343)
Q Consensus 270 ~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~ 325 (343)
.|-+..+|+||-|+++-..|+.+|||+.+.... |+.+..-+ |.|||. -+|..
T Consensus 202 sl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESR-P~~~~~~~--Y~FfvD-~eg~~ 253 (283)
T 2qmx_A 202 SIVFALPNEQGSLFRALATFALRGIDLTKIESR-PSRKKAFE--YLFYAD-FIGHR 253 (283)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEE-ECSSSTTE--EEEEEE-EESCT
T ss_pred EEEEEcCCCCchHHHHHHHHHHcCCCeeEEEee-EcCCCCcc--eEEEEE-EecCC
Confidence 444455699999999999999999999998876 44444433 448884 55654
No 57
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=90.15 E-value=0.89 Score=41.57 Aligned_cols=64 Identities=17% Similarity=0.216 Sum_probs=45.4
Q ss_pred CeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCE-EEEEEEEecCCCCCCChHHHHHHHHHHH
Q 019269 175 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNC-EIDLFIMQADGKKIVDPSKQNGLSSRLW 245 (343)
Q Consensus 175 ~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~-~~d~F~v~~~g~~i~~~~~~~~l~~~L~ 245 (343)
..|.|.+..+|+||-|+++-+.|+.+|+|+. +|.++...+. ..-.|+|+-+|.. .++ .++++|.
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfvD~eg~~-~d~----~v~~aL~ 263 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLT--KIESRPSRKKAFEYLFYADFIGHR-EDQ----NVHNALE 263 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTEEEEEEEEESCT-TSH----HHHHHHH
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCee--EEEeeEcCCCCcceEEEEEEecCC-CcH----HHHHHHH
Confidence 3577777778999999999999999999999 7766644333 3345888855543 333 4555553
No 58
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=90.12 E-value=0.56 Score=43.57 Aligned_cols=52 Identities=15% Similarity=0.074 Sum_probs=38.5
Q ss_pred eEEEEeC-CCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCC
Q 019269 270 PVELSGK-GRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLS 325 (343)
Q Consensus 270 ~ieV~~~-DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~ 325 (343)
.|-+..+ |+||-|+++-..|+.+|||+.+..-. |+.+..-+ |.|||. -+|..
T Consensus 203 Sl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESR-P~~~~~~~--Y~FfiD-~eg~~ 255 (313)
T 3mwb_A 203 TVVVPLPEDHPGALMEILDQFASRGVNLSRIESR-PTGQYLGH--YFFSID-ADGHA 255 (313)
T ss_dssp EEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEE-ECSSSTTS--EEEEEE-EESCT
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEe-ecCCCCcc--EEEEEE-EeCCC
Confidence 4555564 99999999999999999999988876 44443333 459884 55654
No 59
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=89.84 E-value=1.2 Score=41.59 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=35.7
Q ss_pred CCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 277 GRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 277 DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
|+||-||++-..|+.+|||+.+.... |+.+..-+ |.||| |-+|..-+
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESR-P~~~~~~~--Y~Ffi-D~eg~~~d 263 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISR-PIKGRTGT--YSFIV-TLDAAPWE 263 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEE-EETTEEEE--EEEEE-EESSCTTS
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEee-ECCCCCcc--EEEEE-EEeCCcCC
Confidence 89999999999999999999998876 44443333 45887 46676533
No 60
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=89.82 E-value=0.79 Score=41.57 Aligned_cols=49 Identities=10% Similarity=0.175 Sum_probs=36.8
Q ss_pred eEEEEe---CCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcC
Q 019269 270 PVELSG---KGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEG 321 (343)
Q Consensus 270 ~ieV~~---~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~ 321 (343)
.+-+.. .|+||-|+++-..|+.+|||+.+.... |+.+..-+ |.|||.=.
T Consensus 188 sl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESR-P~~~~~~~--Y~FfiD~e 239 (267)
T 2qmw_A 188 SLMFLITPMHDKPGLLASVLNTFALFNINLSWIESR-PLKTQLGM--YRFFVQAD 239 (267)
T ss_dssp EEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEE-ECSSSTTC--EEEEEEES
T ss_pred EEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEe-ecCCCCcc--EEEEEEEe
Confidence 344555 799999999999999999999998876 44444333 45998533
No 61
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=89.31 E-value=2.7 Score=39.17 Aligned_cols=65 Identities=15% Similarity=0.207 Sum_probs=43.5
Q ss_pred CeEEEEEEEC--CcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEE-EEEEEEecCCCCCCChHHHHHHHHHHHH
Q 019269 175 GHTLVQIVCQ--DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCE-IDLFIMQADGKKIVDPSKQNGLSSRLWM 246 (343)
Q Consensus 175 ~~t~i~V~~~--DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~-~d~F~v~~~g~~i~~~~~~~~l~~~L~~ 246 (343)
..+.+.+..+ |+||-|+++-..|+.+|+|+. +|.++...+.. .=.|+|+-+|.. .++ .++++|.+
T Consensus 205 ~kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~eg~~-~d~----~v~~AL~~ 272 (329)
T 3luy_A 205 EYESVLTLIPLVTGPGVLANLLDVFRDAGLNMT--SFISRPIKGRTGTYSFIVTLDAAP-WEE----RFRDALVE 272 (329)
T ss_dssp CEEEEEEEECSCCSTTHHHHHHHHHHHTTCCEE--EEEEEEETTEEEEEEEEEEESSCT-TSH----HHHHHHHH
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHCCcceE--EEEeeECCCCCccEEEEEEEeCCc-CCH----HHHHHHHH
Confidence 3455444454 799999999999999999999 77666544443 345788866643 333 34455433
No 62
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=88.93 E-value=0.73 Score=37.99 Aligned_cols=99 Identities=14% Similarity=0.085 Sum_probs=59.7
Q ss_pred CeEEEEEEE---CCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCC
Q 019269 175 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 251 (343)
Q Consensus 175 ~~t~i~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~~i~~~~~~~~l~~~L~~~L~~~ 251 (343)
+.+.|+|.+ +++||..+++..+|+++|+||. -|.+ .. . .-+|.+.... ..+++.++ +...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd--~I~~-s~-~--~Isf~v~~~~-------~~~~il~~----l~~~ 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVD--MVAT-SE-V--GVSLTIDNDK-------NLPDIVRA----LSDI 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCS--CEEC-CS-S--EEEEEESCCT-------THHHHHHH----HTTT
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEE--EEEe-cC-C--EEEEEECChH-------HHHHHHHH----Hhcc
Confidence 456788875 5789999999999999999997 3432 12 1 2236665211 22333333 2221
Q ss_pred cceeeecCCCCceeeeeeeEEEEeC---CCccHHHHHHHHHHhCCceEEEEE
Q 019269 252 LRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAE 300 (343)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~Ak 300 (343)
..+... ..+ ..+.|.|. ++||+..++..+|+ |+||....
T Consensus 80 ~~v~~~-----~~~---a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is 121 (157)
T 3mah_A 80 GDVTVD-----KDM---VIICIVGDMEWDNVGFEARIINALK--GVPVRMIS 121 (157)
T ss_dssp EEEEEE-----EEE---EEEEEEC------CCHHHHHHHTTT--TSCCSEEE
T ss_pred CeEEEe-----CCe---EEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe
Confidence 111110 001 26777765 78999999999999 99988765
No 63
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=88.58 E-value=9.9 Score=37.54 Aligned_cols=108 Identities=13% Similarity=0.234 Sum_probs=65.6
Q ss_pred CEEEEEEEE---cCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHHHhcccc
Q 019269 40 DVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAM 116 (343)
Q Consensus 40 ~~~~I~V~~---~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~ 116 (343)
+.+.|+|.+ .+++|..+++..+|+.+|+||. -|.|..... .|.|...+....+. ..+.++..+.+ +..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd--~I~sse~si---s~~v~~~~~~~~~~-~~~~l~~~~~e-l~~-- 410 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVD--VVATSEVSI---SLTLDPSKLWSREL-IQQELDHVVEE-LEK-- 410 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEE--EEEEETTEE---EEEECCGGGSSSCC-CHHHHHHHHHH-HTT--
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEE--EEEeCCCeE---EEEEechHhhhhhH-HHHHHHHHHHH-hCC--
Confidence 446678875 6789999999999999999998 444533332 25554321110000 01111111111 110
Q ss_pred cccccccccceeecccCCCCCCchHHHhhhcccCCCCCCCCCCCCCccEEEEEeCCCCCeEEEEEEEC--CcccHHHHHH
Q 019269 117 ISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ--DHKGLLYDIM 194 (343)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~t~i~V~~~--DrpGLl~~i~ 194 (343)
-..|.++. +...|.|.|. ..||+.+++.
T Consensus 411 ----------------------------------------------~~~v~~~~----~~a~VsiVG~m~~~~Gvaa~~f 440 (510)
T 2cdq_A 411 ----------------------------------------------IAVVNLLK----GRAIISLIGNVQHSSLILERAF 440 (510)
T ss_dssp ----------------------------------------------TSEEEEEE----EEEEEEEEECGGGHHHHHHHHH
T ss_pred ----------------------------------------------CCeEEEeC----CcEEEEEEEECCCChhHHHHHH
Confidence 01233321 3467778876 7789999999
Q ss_pred HHHHhCCeeEEE
Q 019269 195 RTLKDYNIQVSY 206 (343)
Q Consensus 195 ~~L~~~glnI~~ 206 (343)
.+|++.|+||..
T Consensus 441 ~aL~~~~InI~m 452 (510)
T 2cdq_A 441 HVLYTKGVNVQM 452 (510)
T ss_dssp HHHHHHTCCCSE
T ss_pred HHHHHCCCCEEE
Confidence 999999999983
No 64
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=88.57 E-value=1 Score=44.59 Aligned_cols=108 Identities=12% Similarity=0.132 Sum_probs=67.1
Q ss_pred CeEEEEEEE---CCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCC-CCC-CChHHHHHHHHHHHHHHc
Q 019269 175 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADG-KKI-VDPSKQNGLSSRLWMELL 249 (343)
Q Consensus 175 ~~t~i~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g-~~i-~~~~~~~~l~~~L~~~L~ 249 (343)
+.+.|+|.+ .++||++++|..+|+++|+||.. |.+ .. . --+|.+.... ... ...+.++++. +.+.
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~--I~s-se-~--sis~~v~~~~~~~~~~~~~~l~~~~----~el~ 409 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDV--VAT-SE-V--SISLTLDPSKLWSRELIQQELDHVV----EELE 409 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEE--EEE-ET-T--EEEEEECCGGGSSSCCCHHHHHHHH----HHHT
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEE--EEe-CC-C--eEEEEEechHhhhhhHHHHHHHHHH----HHhC
Confidence 467888886 67899999999999999999994 443 22 1 2236665221 110 0122223322 3333
Q ss_pred CCcceeeecCCCCceeeeeeeEEEEeC--CCccHHHHHHHHHHhCCceEEEEE
Q 019269 250 QPLRVTVVSRGPDTELLVANPVELSGK--GRPLVFHDITLALKMLDICIFSAE 300 (343)
Q Consensus 250 ~~~~~~~~~~~~~~~v~~~~~ieV~~~--DrpGLL~~I~~~l~~~gi~I~~Ak 300 (343)
.-..+.+. ..+ ..|.|.+. ..||+..++..+|.+.||||....
T Consensus 410 ~~~~v~~~-----~~~---a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs 454 (510)
T 2cdq_A 410 KIAVVNLL-----KGR---AIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS 454 (510)
T ss_dssp TTSEEEEE-----EEE---EEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE
T ss_pred CCCeEEEe-----CCc---EEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE
Confidence 21111110 111 25777777 889999999999999999998764
No 65
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=87.95 E-value=1.2 Score=41.44 Aligned_cols=54 Identities=28% Similarity=0.474 Sum_probs=40.1
Q ss_pred CCeEEEEEEEC-CcccHHHHHHHHHHhCCeeEEEEEEEEeecCCE-EEEEEEEecCCC
Q 019269 174 PGHTLVQIVCQ-DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNC-EIDLFIMQADGK 229 (343)
Q Consensus 174 ~~~t~i~V~~~-DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~-~~d~F~v~~~g~ 229 (343)
...|.|.+..+ |+||-|+++-+.|+.+|+|+. +|.++...+. ..=.|+|+-+|.
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~eg~ 254 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLS--RIESRPTGQYLGHYFFSIDADGH 254 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTSEEEEEEEESC
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEE--EEEEeecCCCCccEEEEEEEeCC
Confidence 35678878886 999999999999999999998 6766543322 223488885554
No 66
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=87.81 E-value=1.3 Score=40.06 Aligned_cols=51 Identities=27% Similarity=0.393 Sum_probs=38.7
Q ss_pred CeEEEEEEE---CCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCE-EEEEEEEecC
Q 019269 175 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNC-EIDLFIMQAD 227 (343)
Q Consensus 175 ~~t~i~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~-~~d~F~v~~~ 227 (343)
..|.|.+.. +|+||-|+++-+.|+.+|+|+. +|.++...+. ..-.|+++-+
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLS--WIESRPLKTQLGMYRFFVQAD 239 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTCEEEEEEES
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCee--EEEEeecCCCCccEEEEEEEe
Confidence 456676777 8999999999999999999999 7766544332 2334888844
No 67
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=87.46 E-value=5.7 Score=32.43 Aligned_cols=47 Identities=6% Similarity=0.132 Sum_probs=33.8
Q ss_pred CCEEEEEEEE---cCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEec
Q 019269 39 SDVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTD 90 (343)
Q Consensus 39 ~~~~~I~V~~---~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~ 90 (343)
.+...|+|.+ ++.||..+++..+|+.+|+||. -|.+..+. -.|.|..
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd--~I~~s~~~---Isf~v~~ 65 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVD--MVATSEVG---VSLTIDN 65 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCS--CEECCSSE---EEEEESC
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEE--EEEecCCE---EEEEECC
Confidence 3456788885 5788999999999999999997 44454332 2366653
No 68
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.17 E-value=2.2 Score=41.10 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=39.8
Q ss_pred CCeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEE
Q 019269 174 PGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIM 224 (343)
Q Consensus 174 ~~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v 224 (343)
.+...|.+.-+|+||.+.+|..+|+++|+||..-... +.|+.+.-+.-+
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~--~~~~~~y~~~d~ 389 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQ--TDGEVGYLVMEA 389 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEE--ECSSCEEEEEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhcc--CCCceEEEEEEe
Confidence 3568999999999999999999999999999976655 677766533333
No 69
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=84.69 E-value=3.4 Score=40.20 Aligned_cols=38 Identities=29% Similarity=0.174 Sum_probs=31.2
Q ss_pred eeeeeeEEEEeCCCccHHHHHHHHHHhCCceEEEEEee
Q 019269 265 LLVANPVELSGKGRPLVFHDITLALKMLDICIFSAEIG 302 (343)
Q Consensus 265 v~~~~~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~ 302 (343)
+.-.+.+.+...|+||.|.+|+.+|.++||+|.+..=.
T Consensus 356 ~~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~ 393 (444)
T 3mtj_A 356 VRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQK 393 (444)
T ss_dssp CEEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeec
Confidence 33445788999999999999999999999999886543
No 70
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=73.89 E-value=3.3 Score=40.20 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=28.8
Q ss_pred CeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEE
Q 019269 175 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGR 208 (343)
Q Consensus 175 ~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~ 208 (343)
..+-+.+...|+||.|++|+++|.++|++|.+..
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~ 391 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMV 391 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEE
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEe
Confidence 3567788899999999999999999999998643
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=68.46 E-value=5.1 Score=38.61 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=39.3
Q ss_pred CCCeEEEEEEECCcccHHHHHHHHHHhCCeeEEEEEEEEeecCC-EEEEEEEEecC
Q 019269 173 SPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGN-CEIDLFIMQAD 227 (343)
Q Consensus 173 ~~~~t~i~V~~~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~-~~~d~F~v~~~ 227 (343)
....|.|.+..+|+||-|+++-+.|+.+|+|+. +|.++...+ ...=.|+|+-+
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLT--kIESRPsk~~~~eY~FfVD~e 84 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLT--HIESRPSRLNKDEYEFFTYLD 84 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTT--SEEEEECSSCTTEEEEEECBC
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceE--EEEeeecCCCCccEEEEEEEe
Confidence 345677778889999999999999999999998 665554322 22334888744
No 72
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=67.35 E-value=4 Score=39.31 Aligned_cols=47 Identities=13% Similarity=0.015 Sum_probs=35.5
Q ss_pred eEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEE
Q 019269 270 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLD 319 (343)
Q Consensus 270 ~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~ 319 (343)
.|-+..+|+||-|+++-..|+.+|||+.+.... |+.+..-+ |.|||.
T Consensus 36 SLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESR-Psk~~~~e--Y~FfVD 82 (429)
T 1phz_A 36 SLIFSLKEEVGALAKVLRLFEENDINLTHIESR-PSRLNKDE--YEFFTY 82 (429)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEE-ECSSCTTE--EEEEEC
T ss_pred EEEEEeCCCccHHHHHHHHHHHcCCceEEEEee-ecCCCCcc--EEEEEE
Confidence 444555799999999999999999999887765 44444433 459884
No 73
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=43.93 E-value=13 Score=29.77 Aligned_cols=40 Identities=20% Similarity=0.171 Sum_probs=31.2
Q ss_pred CCEEEEEEEEc---CCCcHHHHHHHHHHhCCCeEEEEEEEecCCC
Q 019269 39 SDVFLLKLSCY---DRKGLLYDVTAVLCELELTIEKVKISTTPDG 80 (343)
Q Consensus 39 ~~~~~I~V~~~---Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g 80 (343)
.+...|+|.++ |-.|+++.+++.|+..|++|. -|+|...+
T Consensus 60 ~~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif--~iSty~tD 102 (134)
T 1zhv_A 60 PGWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIF--VVSTFDGD 102 (134)
T ss_dssp EEEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCE--EEECSSCE
T ss_pred CCeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeE--EEEecccc
Confidence 34446777654 778999999999999999998 67776543
No 74
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=43.26 E-value=54 Score=26.11 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=33.4
Q ss_pred CCCCCEEEEEEEE---cCCCcHHHHHHHHHHhCCCeEEEEEEEecCCC
Q 019269 36 PKPSDVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDG 80 (343)
Q Consensus 36 ~~~~~~~~I~V~~---~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g 80 (343)
..+.+...|+|.+ -|-.|+++.+++.|+..|+.|. -|+|...+
T Consensus 66 ~~~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif--~iSty~tD 111 (133)
T 1zvp_A 66 ESSALFSLITLTVHSSLEAVGLTAAFATKLAEHGISAN--VIAGYYHD 111 (133)
T ss_dssp CCCSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCE--EEECSSCE
T ss_pred ccCCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcE--EEEecccc
Confidence 3445666777765 6888999999999999999998 67776543
No 75
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=39.63 E-value=54 Score=25.59 Aligned_cols=46 Identities=9% Similarity=0.045 Sum_probs=33.1
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 271 VELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 271 ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+.+...| +.++.+.|.+.|+.+...-.. ...+ -. ||+.||+|..+.
T Consensus 69 l~f~V~d----~d~~~~~l~~~G~~v~~~p~~--~~~G---~~--~~~~DPdG~~ie 114 (144)
T 3r6a_A 69 ATFLVDS----LDKFKTFLEENGAEIIRGPSK--VPTG---RN--MTVRHSDGSVIE 114 (144)
T ss_dssp EEEEESC----HHHHHHHHHHTTCEEEEEEEE--ETTE---EE--EEEECTTSCEEE
T ss_pred EEEEeCC----HHHHHHHHHHcCCEEecCCcc--CCCc---eE--EEEECCCCCEEE
Confidence 3444455 677888899999998776554 3333 34 899999999776
No 76
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=39.34 E-value=26 Score=33.82 Aligned_cols=105 Identities=20% Similarity=0.170 Sum_probs=63.8
Q ss_pred CeEEEEEEE---CCcccHHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEecCCC-CCCChHHHHHHHHHHHHHHcC
Q 019269 175 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGK-KIVDPSKQNGLSSRLWMELLQ 250 (343)
Q Consensus 175 ~~t~i~V~~---~DrpGLl~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~~~g~-~i~~~~~~~~l~~~L~~~L~~ 250 (343)
+.+.|+|.+ .+.+|.+++|..+|+++|+||. .|.+ .. .--+|.+..... .-......+++...|.. + .
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd--~i~s-s~---~sis~~v~~~~~~~~~~~~~~~~~~~el~~-~-~ 378 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVD--LITT-SE---VSVALTLDTTGSTSTGDTLLTQSLLMELSA-L-C 378 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCS--EEEE-ET---TEEEEEECCCCCSSTTCCSSCHHHHHHHHH-H-S
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEE--EEEe-CC---CeEEEEEeccccchhhHHHHHHHHHHHhcc-C-C
Confidence 457778876 4778999999999999999998 3433 21 122366653211 10011234456556543 2 1
Q ss_pred CcceeeecCCCCceeeeeeeEEEEeC---CCccHHHHHHHHHHhCCceEEEE
Q 019269 251 PLRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSA 299 (343)
Q Consensus 251 ~~~~~~~~~~~~~~v~~~~~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~A 299 (343)
+..+ . ..+ ..|.|.+. ..||+..++..+|.+ +||...
T Consensus 379 ~v~~--~-----~~~---a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mI 418 (449)
T 2j0w_A 379 RVEV--E-----EGL---ALVALIGNDLSKACGVGKEVFGVLEP--FNIRMI 418 (449)
T ss_dssp CEEE--E-----EEE---EEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEE
T ss_pred eEEE--e-----CCe---EEEEEECCCccccccHHHHHHHHHhC--CCeEEE
Confidence 1111 0 011 26788887 689999999999966 777654
No 77
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=38.60 E-value=1.1e+02 Score=25.14 Aligned_cols=91 Identities=12% Similarity=0.089 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhCCeeEEEEEEEEeecCCEEEEEEEEe-cCCCCCCChHHHHHHHHHHHHHHcCCcceeeecCCCCceeee
Q 019269 189 LLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMELLQPLRVTVVSRGPDTELLV 267 (343)
Q Consensus 189 Ll~~i~~~L~~~glnI~~A~i~t~t~g~~~~d~F~v~-~~g~~i~~~~~~~~l~~~L~~~L~~~~~~~~~~~~~~~~v~~ 267 (343)
+..-+..++.. |+.+.+..+. ..|..-.-..+++ +.| ++ -+..+.+-+.|.+.|++... ..+.-
T Consensus 14 v~~li~p~~~~-g~eLvdve~~--~~g~~~~LrV~ID~~~g--i~-lddC~~vSr~is~~LD~~~~---------d~i~~ 78 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYG--KIGSDMILSIFVDKPEG--IT-LNDTADLTEMISPVLDTIKP---------DPFPE 78 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEE--EETTEEEEEEEEECSSC--CC-HHHHHHHHHHHGGGTTTCCS---------CCCCS
T ss_pred HHHHHHHHHcC-CcEEEEEEEE--ecCCCcEEEEEEECCCC--CC-HHHHHHHHHHHHHHhccccc---------cCCCC
Confidence 44455666777 9999999986 4444433234555 433 33 44777888887777762100 00122
Q ss_pred eeeEEEEeC--CCccHHHHHHHHHHhCCceE
Q 019269 268 ANPVELSGK--GRPLVFHDITLALKMLDICI 296 (343)
Q Consensus 268 ~~~ieV~~~--DrpGLL~~I~~~l~~~gi~I 296 (343)
.+.+||+++ |||= ..-...-+-.|-.|
T Consensus 79 ~Y~LEVSSPGldRpL--~~~~df~r~~G~~V 107 (164)
T 1ib8_A 79 QYFLEITSPGLERPL--KTKDAVAGAVGKYI 107 (164)
T ss_dssp CEEEEEECCSSSSCC--SSHHHHHHHCSEEE
T ss_pred CeEEEEeCCCCCCCC--CCHHHHHHhCCcEE
Confidence 357888877 6663 33333334444433
No 78
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=34.01 E-value=44 Score=25.55 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 282 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 282 L~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+..+.+.|.+.|+.+...-.. ..+++ . ||+.|++|..++
T Consensus 109 ~~~~~~~l~~~G~~~~~~~~~--~~~g~---~--~~~~DPdG~~ie 147 (156)
T 3kol_A 109 FDRAVTVIGENKIAIAHGPVT--RPTGR---G--VYFYDPDGFMIE 147 (156)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE--C-CCE---E--EEEECTTSCEEE
T ss_pred HHHHHHHHHHCCCccccCcee--cCCcc---E--EEEECCCCCEEE
Confidence 667778889999999776555 33332 5 899999998765
No 79
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=31.75 E-value=44 Score=25.12 Aligned_cols=44 Identities=16% Similarity=0.066 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHhCCceEEEEEeeccc-cCc-eEeeeeEEEEEcCCCCCCC
Q 019269 280 LVFHDITLALKMLDICIFSAEIGRHM-IGD-REWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 280 GLL~~I~~~l~~~gi~I~~AkI~~~T-~g~-~~~dv~~F~v~~~~g~~l~ 327 (343)
.=+..+.+.|.+.|+.+...-.. . .|. ...-. ||+.||+|..++
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~--~~~~~~~~~~~--~~~~DPdGn~ie 124 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSR--RFEGLIEEHET--FFLIDPSNNLLE 124 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEE--ESTTSTTCEEE--EEEECTTCCEEE
T ss_pred HhHHHHHHHHHHcCCceecCccc--ccCCCCCceEE--EEEECCCCCEEE
Confidence 34677888899999998766554 2 221 11124 999999999775
No 80
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=31.73 E-value=50 Score=26.28 Aligned_cols=28 Identities=7% Similarity=-0.249 Sum_probs=23.5
Q ss_pred eCCCccHHHHHHHHHHhCCceEEEEEee
Q 019269 275 GKGRPLVFHDITLALKMLDICIFSAEIG 302 (343)
Q Consensus 275 ~~DrpGLL~~I~~~l~~~gi~I~~AkI~ 302 (343)
+.|-.|+++.|+..|++.||+|.....-
T Consensus 81 ~l~~vGi~a~is~~LA~agIsif~iSty 108 (133)
T 1zvp_A 81 SLEAVGLTAAFATKLAEHGISANVIAGY 108 (133)
T ss_dssp --CCSCHHHHHHHHHHHTTCCCEEEECS
T ss_pred CccHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 3599999999999999999999876643
No 81
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=30.53 E-value=40 Score=26.89 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=27.0
Q ss_pred eEEEEeC---CCccHHHHHHHHHHhCCceEEEEEee
Q 019269 270 PVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 302 (343)
Q Consensus 270 ~ieV~~~---DrpGLL~~I~~~l~~~gi~I~~AkI~ 302 (343)
.|.|.+. |-.|+++.|+..|++.||+|.....-
T Consensus 64 ~i~v~~~l~~~~vGilA~is~pLA~agIsif~iSty 99 (134)
T 1zhv_A 64 CFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVSTF 99 (134)
T ss_dssp EEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEECS
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 4555554 88999999999999999999876643
No 82
>2hza_A Nickel-responsive regulator; nickel-binding, ribbon-helix-helix, transcription factor, ME binding protein; HET: 3CM; 2.10A {Escherichia coli} SCOP: a.43.1.3 d.58.18.4 PDB: 1q5v_A* 2hzv_A 3od2_A*
Probab=29.92 E-value=2e+02 Score=22.47 Aligned_cols=62 Identities=3% Similarity=0.003 Sum_probs=45.0
Q ss_pred EEEEEE-cCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 43 LLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 43 ~I~V~~-~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
.|+++- ....++-.+++.+..++.=-|.+.-=.-+.++.++.++.|.- +.+++..|...|..
T Consensus 55 vi~ivydh~~~~l~~~l~~iqh~~~d~I~s~~hvhl~~~~clevivv~G------~~~~I~~l~~~l~~ 117 (133)
T 2hza_A 55 VLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKG------DMGDVQHFADDVIA 117 (133)
T ss_dssp EEEEEEESSTTSHHHHHHHHHHHTTTTEEEEEEEECSSSEEEEEEEEEE------EHHHHHHHHHHHHH
T ss_pred EEEEEecCCchhHHHHHHHHHHhccCeEEEEeeEEcCCCcEEEEEEEEc------CHHHHHHHHHHHhc
Confidence 444444 444789999999999999877754444446799999999975 25667777777766
No 83
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=26.85 E-value=73 Score=24.83 Aligned_cols=39 Identities=15% Similarity=0.054 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 282 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 282 L~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+....+.|.+.|+.+...-.. ..+++ . +|++||+|..|.
T Consensus 109 vda~~~~l~~~Gv~~~~~p~~--~~~g~---~--~~f~DPdGn~ie 147 (155)
T 4g6x_A 109 IAAEYERLSALGVRFTQEPTD--MGPVV---T--AILDDTCGNLIQ 147 (155)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE--CSSCE---E--EEEECSSSCEEE
T ss_pred hhhhhhHHhcCCcEEeeCCEE--cCCeE---E--EEEECCCCCEEE
Confidence 667778889999999877666 44443 3 789999998765
No 84
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=25.71 E-value=95 Score=23.46 Aligned_cols=50 Identities=6% Similarity=0.048 Sum_probs=31.7
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 271 VELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 271 ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+.+...|+.. +.++.+.|.+.|+.+...-.. ...+ ... ||+.||+|..+.
T Consensus 79 ~~f~v~~~~d-v~~~~~~l~~~G~~~~~~~~~--~~~g--~~~--~~~~DPdG~~ie 128 (141)
T 2rbb_A 79 LNFDVDTKEA-VDKLVPVAIAAGATLIKAPYE--TYYH--WYQ--AVLLDPERNVFR 128 (141)
T ss_dssp EEEECSCHHH-HHHHHHHHHHTTCEEEEEEEE--CTTS--EEE--EEEECTTSCEEE
T ss_pred EEEEcCCHHH-HHHHHHHHHHcCCeEecCccc--cCCc--cEE--EEEECCCCCEEE
Confidence 4444444333 556677888999988665444 2221 234 899999998765
No 85
>2bj7_A Nickel responsive regulator; transcription, repressor, NIKR, DNA- binding, metal-binding, transcription regulation; HET: PG4; 2.1A {Pyrococcus horikoshii} SCOP: a.43.1.3 d.58.18.4 PDB: 2bj1_A 2bj3_A* 2bj8_A* 2bj9_A*
Probab=25.69 E-value=2.4e+02 Score=22.09 Aligned_cols=62 Identities=10% Similarity=0.052 Sum_probs=44.2
Q ss_pred EEEEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 43 LLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 43 ~I~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
...|+-....++-.+++.+..++.=-|.+.-=.-+.++.++.++.|.- +.+++..|...|..
T Consensus 58 I~ivydh~~~~l~~~l~~iqh~~~d~I~s~~hvhl~~~~clevivv~G------~~~~I~~l~~~l~~ 119 (138)
T 2bj7_A 58 ITIVYNHDEGDVVKALLDLQHEYLDEIISSLHVHMDEHNCLEVIVVKG------EAKKIKMIADKLLS 119 (138)
T ss_dssp EEEEEETTSTTHHHHHHHHHHHTTTTEEEEEEEECSSSEEEEEEEEEE------EHHHHHHHHHHHHT
T ss_pred EEEEecCcchhHHHHHHHHHHhccCeEEEEeeEEcCCCCEEEEEEEEc------CHHHHHHHHHHHhc
Confidence 333344455688999999999998777754444445799999999975 25667777777765
No 86
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=25.48 E-value=2e+02 Score=21.01 Aligned_cols=56 Identities=18% Similarity=0.162 Sum_probs=39.8
Q ss_pred EEEEcCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 45 KLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 45 ~V~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
...+-=-+.++.++.++|.++|+ .|+|..-++|.+ |.+++. .+..+++.+..-|.+
T Consensus 22 V~TGgfg~~~v~ev~~am~~~g~---~gkii~~~dGl~---y~~T~~----~s~~eLdk~t~wLD~ 77 (85)
T 2l48_A 22 IQSGAFSPYETPDVMGALTSLKM---TADFILQSDGLT---YFISKP----TSDAQLKAMKEYLDR 77 (85)
T ss_dssp EEECCBCTTTHHHHHHHHHHTTC---CEEEEECTTSCE---EEEECC----CCHHHHHHHHHHHHH
T ss_pred EEecccCHHHHHHHHHHHHHcCc---eEEEEECCCceE---EEEeCC----CCHHHHHHHHHHHhc
Confidence 33444457789999999999998 588888778876 667763 234566776655544
No 87
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=25.33 E-value=2.1e+02 Score=21.26 Aligned_cols=50 Identities=20% Similarity=0.117 Sum_probs=36.6
Q ss_pred CCCEEEEEEEEcCCCcHHHHHHHHHHhCCCe-EEEEEEEecCCCEEEEEEEEecCCCcc
Q 019269 38 PSDVFLLKLSCYDRKGLLYDVTAVLCELELT-IEKVKISTTPDGKVMDLFFVTDTRELL 95 (343)
Q Consensus 38 ~~~~~~I~V~~~Dr~GLl~~i~~~L~~~gln-I~~A~i~T~~~g~~~d~f~V~~~~g~~ 95 (343)
..++..+.+.+.| +......|..+|.. +...-. ....|.. |++.|++|+.
T Consensus 64 ~~~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~-~~~~G~~---~~~~DPdGn~ 114 (128)
T 3g12_A 64 QIPSLQLGFQITD----LEKTVQELVKIPGAMCILDPT-DMPDGKK---AIVLDPDGHS 114 (128)
T ss_dssp CCCSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEE-ECC-CEE---EEEECTTCCE
T ss_pred CCCceEEEEEeCC----HHHHHHHHHHCCCceeccCce-eCCCccE---EEEECCCCCE
Confidence 3456778888888 88888999999999 775433 3345654 8899999974
No 88
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=24.67 E-value=1.7e+02 Score=21.48 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=27.2
Q ss_pred HHHHHHHHHhCCceE-------EEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 282 FHDITLALKMLDICI-------FSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 282 L~~I~~~l~~~gi~I-------~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+.++.+.|.+.|+.+ ...-.. ...|.+ . ||+.||+|..+.
T Consensus 69 v~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~g~~---~--~~~~DPdG~~ie 115 (126)
T 1ecs_A 69 LAEFYRQCKSVGIQETSSGYPRIHAPEL-QGWGGT---M--AALVDPDGTLLR 115 (126)
T ss_dssp HHHHHHHHHHTTCCBCSSSSSEEEEEEE-CTTSSE---E--EEEECTTSCEEE
T ss_pred HHHHHHHHHHCCCccccccCccccCCcc-cCcccE---E--EEEECCCCCEEE
Confidence 777888899999984 332222 023433 4 899999999765
No 89
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=24.20 E-value=1.8e+02 Score=21.15 Aligned_cols=47 Identities=11% Similarity=0.109 Sum_probs=32.6
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccc-cCceEeeeeEEEEEcCCCCCCC
Q 019269 271 VELSGKGRPLVFHDITLALKMLDICIFSAEIGRHM-IGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 271 ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T-~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+-+...| +.++.+.|.+.|+.+..--.. . .|. .-. ||++|++|..+.
T Consensus 75 ~~~~v~d----~~~~~~~l~~~G~~~~~~~~~--~~~g~--~~~--~~~~DPdG~~ie 122 (135)
T 1f9z_A 75 IALSVDN----AAEACEKIRQNGGNVTREAGP--VKGGT--TVI--AFVEDPDGYKIE 122 (135)
T ss_dssp EEEECSC----HHHHHHHHHHTTCEEEEEEEE--CTTSC--CEE--EEEECTTSCEEE
T ss_pred EEEEeCC----HHHHHHHHHHCCCEEecCCcc--CCCCc--eeE--EEEECCCCCEEE
Confidence 4455566 678888899999998765433 2 232 123 889999999765
No 90
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=23.96 E-value=90 Score=23.33 Aligned_cols=49 Identities=10% Similarity=0.146 Sum_probs=30.8
Q ss_pred EEEEeCCCccHHHHHHHHHHh---CCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 271 VELSGKGRPLVFHDITLALKM---LDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 271 ieV~~~DrpGLL~~I~~~l~~---~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+-+...|+. =+..+.+.|.+ .|+.+...-... ..| -. ||+.||+|..+.
T Consensus 76 ~~~~v~~~~-dv~~~~~~l~~~~~~G~~~~~~p~~~-~~g----~~--~~~~DPdGn~ie 127 (132)
T 3sk2_A 76 IGIMLPTGE-DVDKLFNEWTKQKSHQIIVIKEPYTD-VFG----RT--FLISDPDGHIIR 127 (132)
T ss_dssp EEEEESSHH-HHHHHHHHHHHCSSSCCEEEEEEEEE-TTE----EE--EEEECTTCCEEE
T ss_pred EEEEeCCHH-HHHHHHHHHHhhhcCCCEEeeCCccc-Cce----EE--EEEECCCCCEEE
Confidence 344444443 34556666778 999987654440 233 34 899999998654
No 91
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=23.45 E-value=1.6e+02 Score=22.05 Aligned_cols=47 Identities=11% Similarity=0.093 Sum_probs=32.7
Q ss_pred eEEEEeCCCccHHHHHHHHHHhCCce-EEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 270 PVELSGKGRPLVFHDITLALKMLDIC-IFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 270 ~ieV~~~DrpGLL~~I~~~l~~~gi~-I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
.+.+...| +.+..+.+.+.|+. +...-... ..|. +||+.|++|..+.
T Consensus 69 ~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~-~~G~------~~~~~DPdGn~ie 116 (128)
T 3g12_A 69 QLGFQITD----LEKTVQELVKIPGAMCILDPTDM-PDGK------KAIVLDPDGHSIE 116 (128)
T ss_dssp EEEEEESC----HHHHHHHHTTSTTCEEEEEEEEC-C-CE------EEEEECTTCCEEE
T ss_pred EEEEEeCC----HHHHHHHHHHCCCceeccCceeC-CCcc------EEEEECCCCCEEE
Confidence 35666677 88888999999999 66543330 2232 2689999999775
No 92
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=23.05 E-value=63 Score=23.83 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=29.6
Q ss_pred HHHHHHHHHhCCceEEEEEeeccccCc-eEeeeeEEEEEcCCCCCCC
Q 019269 282 FHDITLALKMLDICIFSAEIGRHMIGD-REWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 282 L~~I~~~l~~~gi~I~~AkI~~~T~g~-~~~dv~~F~v~~~~g~~l~ 327 (343)
+.++.+.|.+.|+.+...-.. ..+. ...-. ||+.||+|..+.
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~--~~~~~g~~~~--~~~~DPdG~~ie 126 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVK--RTGAQGAITS--FYFRDPDGNLIE 126 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEE--EEETTEEEEE--EEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCccccCCcc--ccCCCCCeEE--EEEECCCCCEEE
Confidence 777888899999998765544 2222 22234 899999998664
No 93
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=23.01 E-value=61 Score=25.01 Aligned_cols=42 Identities=14% Similarity=0.197 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCceEEEEEeeccccCce-EeeeeEEEEEcCCCCCCC
Q 019269 282 FHDITLALKMLDICIFSAEIGRHMIGDR-EWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 282 L~~I~~~l~~~gi~I~~AkI~~~T~g~~-~~dv~~F~v~~~~g~~l~ 327 (343)
+.++.+.|.+.|+.+...-.. ..|.. .... ||+.||+|..++
T Consensus 101 l~~~~~~l~~~G~~~~~~p~~--~~~~~g~~~~--~~~~DPdGn~iE 143 (147)
T 3zw5_A 101 LEEMIQHLKACDVPIEEGPVP--RTGAKGPIMS--IYFRDPDRNLIE 143 (147)
T ss_dssp HHHHHHHHHHTTCCCCEEEEE--EEETTEEEEE--EEEECTTCCEEE
T ss_pred HHHHHHHHHHcCCceeeCccc--ccCCCCceEE--EEEECCCCCEEE
Confidence 566777889999998765544 33322 2235 899999998654
No 94
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=22.62 E-value=1.2e+02 Score=22.78 Aligned_cols=50 Identities=10% Similarity=0.018 Sum_probs=31.0
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 271 VELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 271 ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+.+...++. =+..+.+.|.+.|+.+...-... ..|. -. ||+.|++|..+.
T Consensus 75 l~f~v~~~~-dv~~~~~~l~~~G~~~~~~~~~~-~~g~---~~--~~~~DPdG~~ie 124 (138)
T 2a4x_A 75 IAFEFPDTA-SVDKKYAELVDAGYEGHLKPWNA-VWGQ---RY--AIVKDPDGNVVD 124 (138)
T ss_dssp EEEECSSHH-HHHHHHHHHHHTTCCEEEEEEEE-TTTE---EE--EEEECTTCCEEE
T ss_pred EEEEeCCHH-HHHHHHHHHHHCCCceeeCCccc-CCCc---EE--EEEECCCCCEEE
Confidence 444444322 25667778889999987543330 2232 24 899999998764
No 95
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=22.56 E-value=1e+02 Score=22.84 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=27.6
Q ss_pred HHHHHHHHHhCCceEEEEEeecc-ccCceEeeeeEEEEEcCCCCCCC
Q 019269 282 FHDITLALKMLDICIFSAEIGRH-MIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 282 L~~I~~~l~~~gi~I~~AkI~~~-T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+....+.|.+.|+.+...-..+. ..|. -+ +|+.|++|..++
T Consensus 88 i~~~~~~l~~~G~~~~~~p~~~~~~~g~---~~--~~~~dPdG~~iE 129 (133)
T 3hdp_A 88 IQKSIEEMSQIGYTLFKKAEIAPAIDNR---KV--AFLFSTDIGLIE 129 (133)
T ss_dssp HHHHHHHHTTTTEEEEEEEEEEGGGTTE---EE--EEEEETTTEEEE
T ss_pred HHHHHHHHHHcCCccccCCeecccCCCc---eE--EEEECCCceEEE
Confidence 67788889999999876522100 2232 34 899999997553
No 96
>2wvf_A Hpnikr, putative nickel-responsive regulator; transcription factor, transcription regulation, RHH, DNA-binding, transcription, metal-binding; 1.60A {Helicobacter pylori} PDB: 2wvc_A 3pht_A 2ca9_A 2cad_A* 2caj_A 3lgh_A 2wvd_A 2wve_A* 2wvb_A 2y3y_A* 3qsi_B
Probab=22.10 E-value=3e+02 Score=21.92 Aligned_cols=62 Identities=3% Similarity=-0.037 Sum_probs=44.0
Q ss_pred EEEEEE-cCCCcHHHHHHHHHHhCCCeEEEEEEEecCCCEEEEEEEEecCCCcccchhHHHHHHHHHHH
Q 019269 43 LLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 110 (343)
Q Consensus 43 ~I~V~~-~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~g~~~~~~~~~~l~~~L~~ 110 (343)
.|+++- ....++-.+++.+..++.=-|.+.-=.-+.++.++.++.|.-+ ..++..|...|..
T Consensus 67 vi~ivydh~~~~l~~~l~~iqh~~~d~Iis~~Hvhld~~~clEvivv~G~------~~~I~~l~~kl~~ 129 (148)
T 2wvf_A 67 VLVVIYDGGQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGN------SFEIQRLQLEIGG 129 (148)
T ss_dssp EEEEEEETTSTTHHHHHHHHHHHCSSEEEEEEEEECSSSEEEEEEEEEEC------HHHHHHHHHHHHT
T ss_pred EEEEEEcCCchhHHHHHHHHHHhccCeEEEEeeEEcCCCCEEEEEEEEcC------HHHHHHHHHHHhc
Confidence 444443 4457888999999999997777544444457999999999752 5566777666655
No 97
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=22.07 E-value=84 Score=24.03 Aligned_cols=40 Identities=8% Similarity=0.068 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 282 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 282 L~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+.++.+.|.+.|+.+...... ..++ ... ||+.||+|..++
T Consensus 98 ld~~~~~l~~~G~~~~~~~~~--~~~~--~~~--~~~~DPdG~~ie 137 (141)
T 3ghj_A 98 IEPLKKALESKGVSVHGPVNQ--EWMQ--AVS--LYFADPNGHALE 137 (141)
T ss_dssp HHHHHHHHHHTTCCCEEEEEE--GGGT--EEE--EEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCeEeCCccc--CCCC--ceE--EEEECCCCCEEE
Confidence 677888899999998843333 3332 234 899999998653
No 98
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=21.06 E-value=1.3e+02 Score=22.36 Aligned_cols=61 Identities=13% Similarity=0.011 Sum_probs=38.4
Q ss_pred EEEeCCCccHH----HHHHHHHHhCCce-EEEEEeeccccCceEeeeeEEEEEcCCCCCCCchHHHHHHHHHHcCCC
Q 019269 272 ELSGKGRPLVF----HDITLALKMLDIC-IFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRNKIEEGVWKLLMGWE 343 (343)
Q Consensus 272 eV~~~DrpGLL----~~I~~~l~~~gi~-I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~~~~~~~~l~~~L~~~~ 343 (343)
.|.-.-|||+| ..|.++|..+|++ |.+.++. -+|.+.-....+=..++..+++.+.|+.|.
T Consensus 19 ~V~V~lKpgVlDPqG~aV~~aL~~LG~~~V~~VR~G-----------K~~el~~~~~~~~~a~~~v~~mc~kLLaNp 84 (94)
T 1vq3_A 19 AIDVQYRSNVRDPRGETIERVLREEKGLPVKKLRLG-----------KSIHLEVEAENKEKAYEIVKKACEELLVNP 84 (94)
T ss_dssp EEEEEECTTSCCHHHHHHHHHHHHTTCCCEEEEEEE-----------EEEEEEEECSSHHHHHHHHHHHHHHTTSCT
T ss_pred EEEEEECCCCcCcHHHHHHHHHHHcCCCccceeeee-----------eEEEEEecCCCHHHHHHHHHHHHHHHcCCC
Confidence 34444477776 4588999999996 9999887 335554321111011335688888888763
No 99
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=20.94 E-value=98 Score=24.05 Aligned_cols=49 Identities=10% Similarity=0.011 Sum_probs=32.1
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 271 VELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 271 ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
+.+...|+ -=+..+.+.|.+.|+.|...-.. ...+ -. ||+.||+|..+.
T Consensus 71 l~f~v~d~-~dvd~~~~~l~~~G~~i~~~p~~--~~~G---~~--~~~~DPdG~~ie 119 (148)
T 3rhe_A 71 LSFQVNSN-EMVDEIHRQWSDKEISIIQPPTQ--MDFG---YT--FVGVDPDEHRLR 119 (148)
T ss_dssp EEEECSCH-HHHHHHHHHHHHTTCCEEEEEEE--ETTE---EE--EEEECTTCCEEE
T ss_pred EEEEcCCH-HHHHHHHHHHHhCCCEEEeCCee--cCCC---cE--EEEECCCCCEEE
Confidence 44444443 33566677788999998765443 2222 34 899999999776
No 100
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=20.63 E-value=69 Score=25.18 Aligned_cols=50 Identities=14% Similarity=0.079 Sum_probs=31.9
Q ss_pred eEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 270 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 270 ~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
.+-+...++.. +.++.+.|.+.|+.+...... ..|. -. ||+.|++|..+.
T Consensus 79 hi~f~V~~~~d-ld~~~~~l~~~G~~~~~~~~~--~~g~---~~--~~~~DPdG~~ie 128 (160)
T 3r4q_A 79 HFCFYADDKAE-VDEWKTRFEALEIPVEHYHRW--PNGS---YS--VYIRDPAGNSVE 128 (160)
T ss_dssp EEEEEESSHHH-HHHHHHHHHTTTCCCCEEEEC--TTSC---EE--EEEECTTCCEEE
T ss_pred EEEEEeCCHHH-HHHHHHHHHHCCCEEeccccc--cCCc---EE--EEEECCCCCEEE
Confidence 34444544333 566777788999998743322 2243 34 899999999775
No 101
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=20.24 E-value=1.2e+02 Score=21.96 Aligned_cols=49 Identities=10% Similarity=0.104 Sum_probs=30.1
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCC
Q 019269 271 VELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSV 326 (343)
Q Consensus 271 ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l 326 (343)
+.+...|.- =+..+.+.|.+.|+.+...-.. ...+ .-. ||+.||+|..+
T Consensus 75 i~~~v~d~~-~v~~~~~~l~~~G~~~~~~~~~--~~~g--~~~--~~~~DPdG~~i 123 (127)
T 3e5d_A 75 IAISTGTKE-AVDELTEKLRQDGFAIAGEPRM--TGDG--YYE--SVVLDPEGNRI 123 (127)
T ss_dssp EEEECSSHH-HHHHHHHHHHHTTCCEEEEEEE--CTTS--CEE--EEEECTTSCEE
T ss_pred EEEEcCCHH-HHHHHHHHHHHcCCeEecCccc--CCCC--cEE--EEEECCCCCEE
Confidence 344444432 2456777788999998775433 2111 123 88999999865
No 102
>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*
Probab=20.11 E-value=71 Score=25.62 Aligned_cols=47 Identities=6% Similarity=0.058 Sum_probs=33.3
Q ss_pred eEEEEeCCCccHHHHHHHHHHhCCceEEEEEeeccccCceEeeeeEEEEEcCCCCCCC
Q 019269 270 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 327 (343)
Q Consensus 270 ~ieV~~~DrpGLL~~I~~~l~~~gi~I~~AkI~~~T~g~~~~dv~~F~v~~~~g~~l~ 327 (343)
.+-+...| +..+.+-|.+.|+.+...... ..+. .. ||+.|++|..++
T Consensus 130 hl~f~v~d----v~~~~~~l~~~G~~~~~~~~~--~~~~---~~--~~~~DPdG~~ie 176 (187)
T 3vw9_A 130 HIGIAVPD----VYSACKRFEELGVKFVKKPDD--GKMK---GL--AFIQDPDGYWIE 176 (187)
T ss_dssp EEEEECSC----HHHHHHHHHHTTCCEEECTTS--SSST---TC--EEEECTTCCEEE
T ss_pred EEEEEECC----HHHHHHHHHHCCCeEeeCCcc--CCcc---eE--EEEECCCCCEEE
Confidence 45566667 888889999999998763222 2222 25 899999999775
Done!