Query 019273
Match_columns 343
No_of_seqs 376 out of 1715
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 08:07:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019273.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019273hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK09481 sspA stringent starva 99.9 4.8E-26 1E-30 206.9 13.0 177 133-338 9-193 (211)
2 PRK13972 GSH-dependent disulfi 99.9 3.5E-25 7.5E-30 201.5 13.2 183 134-338 1-196 (215)
3 PRK11752 putative S-transferas 99.9 8.1E-25 1.7E-29 206.1 15.3 208 101-338 19-249 (264)
4 COG0625 Gst Glutathione S-tran 99.9 2.3E-24 5.1E-29 195.3 13.0 185 135-338 1-195 (211)
5 PRK15113 glutathione S-transfe 99.9 5.4E-24 1.2E-28 193.8 13.9 182 133-338 4-199 (214)
6 PLN02473 glutathione S-transfe 99.9 4.8E-24 1E-28 193.3 12.5 184 134-338 2-202 (214)
7 KOG0868 Glutathione S-transfer 99.9 1.1E-23 2.4E-28 182.8 10.8 176 134-336 5-196 (217)
8 PRK10542 glutathionine S-trans 99.9 2.7E-23 5.9E-28 186.3 11.9 181 135-338 1-188 (201)
9 PLN02395 glutathione S-transfe 99.9 6.2E-23 1.3E-27 186.0 11.9 182 134-338 2-201 (215)
10 TIGR01262 maiA maleylacetoacet 99.9 3.3E-22 7.1E-27 180.5 11.6 182 136-338 1-195 (210)
11 KOG0867 Glutathione S-transfer 99.9 5.1E-22 1.1E-26 183.1 12.8 184 134-338 2-200 (226)
12 PRK10357 putative glutathione 99.9 9.5E-22 2.1E-26 176.8 11.0 182 135-338 1-191 (202)
13 PRK10387 glutaredoxin 2; Provi 99.9 1.7E-21 3.7E-26 175.8 12.0 180 135-339 1-205 (210)
14 KOG0406 Glutathione S-transfer 99.9 6.2E-21 1.3E-25 174.3 14.8 176 133-338 8-202 (231)
15 PLN02378 glutathione S-transfe 99.8 1.9E-20 4.1E-25 170.6 12.0 160 140-338 17-190 (213)
16 TIGR00862 O-ClC intracellular 99.8 6.7E-20 1.5E-24 169.9 11.3 171 140-339 16-212 (236)
17 PLN02817 glutathione dehydroge 99.8 2E-19 4.3E-24 169.7 12.2 158 142-338 72-242 (265)
18 TIGR02182 GRXB Glutaredoxin, G 99.8 4.6E-19 1E-23 161.2 12.8 177 136-340 1-205 (209)
19 cd03041 GST_N_2GST_N GST_N fam 99.8 1.1E-18 2.4E-23 134.1 8.4 77 134-216 1-77 (77)
20 PTZ00057 glutathione s-transfe 99.7 8.2E-18 1.8E-22 152.2 11.1 170 134-338 4-190 (205)
21 cd03052 GST_N_GDAP1 GST_N fami 99.7 2.5E-17 5.4E-22 125.6 8.2 73 135-213 1-73 (73)
22 COG0435 ECM4 Predicted glutath 99.7 5.2E-17 1.1E-21 149.9 11.8 212 101-337 11-276 (324)
23 cd03045 GST_N_Delta_Epsilon GS 99.7 5.7E-17 1.2E-21 122.7 8.6 74 135-214 1-74 (74)
24 cd03048 GST_N_Ure2p_like GST_N 99.7 9.9E-17 2.1E-21 123.9 9.3 80 134-218 1-81 (81)
25 PF13417 GST_N_3: Glutathione 99.7 1.4E-16 3.1E-21 121.6 9.1 74 137-219 1-74 (75)
26 cd03059 GST_N_SspA GST_N famil 99.7 2.1E-16 4.6E-21 119.1 8.5 73 135-216 1-73 (73)
27 cd03050 GST_N_Theta GST_N fami 99.7 3.6E-16 7.7E-21 119.3 8.9 76 135-216 1-76 (76)
28 cd03051 GST_N_GTT2_like GST_N 99.7 3.1E-16 6.6E-21 118.0 8.4 74 135-213 1-74 (74)
29 PF13409 GST_N_2: Glutathione 99.7 2.1E-16 4.6E-21 119.3 6.9 70 142-215 1-70 (70)
30 cd03053 GST_N_Phi GST_N family 99.7 5.3E-16 1.2E-20 118.0 9.0 75 135-215 2-76 (76)
31 cd03060 GST_N_Omega_like GST_N 99.6 6.6E-16 1.4E-20 116.5 8.5 69 136-212 2-70 (71)
32 cd03057 GST_N_Beta GST_N famil 99.6 9.3E-16 2E-20 117.2 8.7 77 135-217 1-77 (77)
33 cd03056 GST_N_4 GST_N family, 99.6 8.6E-16 1.9E-20 115.5 8.4 73 135-213 1-73 (73)
34 cd03058 GST_N_Tau GST_N family 99.6 1.1E-15 2.4E-20 116.1 8.6 73 135-216 1-74 (74)
35 cd03047 GST_N_2 GST_N family, 99.6 1.3E-15 2.9E-20 115.4 8.3 73 135-213 1-73 (73)
36 cd03061 GST_N_CLIC GST_N famil 99.6 1.4E-15 2.9E-20 120.9 8.4 70 141-219 20-89 (91)
37 cd03044 GST_N_EF1Bgamma GST_N 99.6 1.8E-15 4E-20 115.4 8.3 73 136-214 2-74 (75)
38 cd03037 GST_N_GRX2 GST_N famil 99.6 1.6E-15 3.5E-20 114.2 7.8 71 135-214 1-71 (71)
39 cd03055 GST_N_Omega GST_N fami 99.6 3.7E-15 8.1E-20 117.7 9.4 76 130-213 14-89 (89)
40 cd03040 GST_N_mPGES2 GST_N fam 99.6 3.9E-15 8.5E-20 113.7 9.0 74 134-216 1-76 (77)
41 cd03046 GST_N_GTT1_like GST_N 99.6 5.4E-15 1.2E-19 112.3 8.5 76 135-217 1-76 (76)
42 cd03076 GST_N_Pi GST_N family, 99.6 3.9E-15 8.5E-20 113.1 7.3 73 134-215 1-73 (73)
43 cd03042 GST_N_Zeta GST_N famil 99.6 6.3E-15 1.4E-19 110.9 8.1 73 135-213 1-73 (73)
44 cd03049 GST_N_3 GST_N family, 99.6 9.7E-15 2.1E-19 110.4 7.8 71 135-213 1-73 (73)
45 cd03039 GST_N_Sigma_like GST_N 99.6 6.3E-15 1.4E-19 111.3 6.5 72 135-214 1-72 (72)
46 KOG2903 Predicted glutathione 99.6 4E-14 8.7E-19 129.9 12.5 182 133-337 36-277 (319)
47 cd03080 GST_N_Metaxin_like GST 99.5 1.6E-14 3.5E-19 110.2 8.1 68 134-217 1-75 (75)
48 cd03038 GST_N_etherase_LigE GS 99.5 1.7E-14 3.7E-19 112.3 7.9 71 141-217 14-84 (84)
49 PF02798 GST_N: Glutathione S- 99.5 5.2E-14 1.1E-18 107.9 9.2 73 135-214 3-76 (76)
50 PLN02907 glutamate-tRNA ligase 99.5 6.3E-14 1.4E-18 148.0 12.7 146 135-338 3-157 (722)
51 cd03075 GST_N_Mu GST_N family, 99.5 4.8E-14 1E-18 109.8 7.7 76 136-216 2-82 (82)
52 cd03077 GST_N_Alpha GST_N fami 99.5 2.1E-13 4.5E-18 105.4 8.6 71 135-217 2-77 (79)
53 KOG4420 Uncharacterized conser 99.4 8.9E-14 1.9E-18 127.6 5.3 85 130-220 22-106 (325)
54 cd03043 GST_N_1 GST_N family, 99.4 4.5E-13 9.8E-18 101.9 7.7 67 140-213 7-73 (73)
55 cd00570 GST_N_family Glutathio 99.4 6.6E-13 1.4E-17 97.0 8.3 71 135-213 1-71 (71)
56 cd03054 GST_N_Metaxin GST_N fa 99.4 1.4E-12 3.1E-17 98.4 7.9 64 136-215 2-72 (72)
57 COG2999 GrxB Glutaredoxin 2 [P 99.3 3.6E-12 7.8E-17 111.2 8.6 182 135-338 1-204 (215)
58 KOG1695 Glutathione S-transfer 99.3 1.5E-11 3.2E-16 111.7 10.9 183 134-338 3-191 (206)
59 KOG1422 Intracellular Cl- chan 99.2 7.6E-11 1.6E-15 105.6 11.7 161 142-338 20-196 (221)
60 TIGR02190 GlrX-dom Glutaredoxi 99.1 3.1E-10 6.7E-15 87.6 8.9 74 131-213 6-79 (79)
61 cd03079 GST_N_Metaxin2 GST_N f 99.0 5.3E-10 1.2E-14 85.5 6.5 64 135-215 11-74 (74)
62 cd03029 GRX_hybridPRX5 Glutare 98.9 4.9E-09 1.1E-13 79.1 8.5 71 134-213 2-72 (72)
63 KOG3029 Glutathione S-transfer 98.9 4.4E-09 9.6E-14 97.9 9.6 68 134-212 90-157 (370)
64 PRK10638 glutaredoxin 3; Provi 98.9 6.6E-09 1.4E-13 80.7 8.2 73 134-214 3-75 (83)
65 TIGR02196 GlrX_YruB Glutaredox 98.8 3.8E-08 8.2E-13 73.0 7.8 72 134-213 1-74 (74)
66 cd03027 GRX_DEP Glutaredoxin ( 98.7 6.5E-08 1.4E-12 73.1 7.6 68 134-209 2-69 (73)
67 cd02066 GRX_family Glutaredoxi 98.7 1.2E-07 2.5E-12 69.8 7.9 70 134-211 1-70 (72)
68 PRK10329 glutaredoxin-like pro 98.6 1.5E-07 3.3E-12 73.1 8.3 73 134-213 2-74 (81)
69 COG0695 GrxC Glutaredoxin and 98.6 1.6E-07 3.5E-12 72.9 8.0 72 134-211 2-73 (80)
70 cd02976 NrdH NrdH-redoxin (Nrd 98.6 1.4E-07 3E-12 69.8 6.9 57 134-196 1-57 (73)
71 TIGR02200 GlrX_actino Glutared 98.6 2.9E-07 6.3E-12 69.3 8.7 72 135-213 2-76 (77)
72 cd03418 GRX_GRXb_1_3_like Glut 98.6 2.4E-07 5.3E-12 69.8 7.6 71 135-213 2-73 (75)
73 KOG4244 Failed axon connection 98.6 7.1E-07 1.5E-11 82.9 11.4 72 133-220 44-122 (281)
74 TIGR02183 GRXA Glutaredoxin, G 98.5 4.7E-07 1E-11 71.0 8.6 75 135-217 2-83 (86)
75 cd03419 GRX_GRXh_1_2_like Glut 98.5 9.5E-07 2.1E-11 67.6 8.9 75 135-214 2-76 (82)
76 PRK11200 grxA glutaredoxin 1; 98.5 9E-07 1.9E-11 68.9 8.8 76 134-217 2-84 (85)
77 TIGR02194 GlrX_NrdH Glutaredox 98.5 7.3E-07 1.6E-11 67.3 7.8 55 135-196 1-55 (72)
78 TIGR02189 GlrX-like_plant Glut 98.5 9.3E-07 2E-11 71.3 8.6 78 131-213 6-83 (99)
79 TIGR02181 GRX_bact Glutaredoxi 98.5 7.4E-07 1.6E-11 68.2 7.5 72 135-214 1-72 (79)
80 PHA03050 glutaredoxin; Provisi 98.4 1.1E-06 2.3E-11 72.2 8.6 74 133-211 13-89 (108)
81 cd03078 GST_N_Metaxin1_like GS 98.4 8.9E-07 1.9E-11 67.5 6.9 58 142-215 15-72 (73)
82 PF00462 Glutaredoxin: Glutare 98.4 8.4E-07 1.8E-11 64.4 5.5 59 135-201 1-59 (60)
83 TIGR00365 monothiol glutaredox 98.3 3E-06 6.5E-11 68.1 8.7 75 131-213 10-89 (97)
84 TIGR02180 GRX_euk Glutaredoxin 98.3 3.9E-06 8.5E-11 64.3 8.4 75 135-214 1-77 (84)
85 cd03028 GRX_PICOT_like Glutare 98.2 7.2E-06 1.6E-10 64.8 8.8 74 132-213 7-85 (90)
86 cd03189 GST_C_GTT1_like GST_C 97.9 6.2E-06 1.4E-10 67.4 3.2 107 222-338 1-118 (119)
87 cd03200 GST_C_JTV1 GST_C famil 97.9 9.2E-06 2E-10 65.0 3.8 90 209-337 1-95 (96)
88 PRK10824 glutaredoxin-4; Provi 97.9 7.4E-05 1.6E-09 62.0 8.7 74 132-213 14-92 (115)
89 cd03196 GST_C_5 GST_C family, 97.8 2.6E-05 5.5E-10 64.2 4.1 98 224-338 2-108 (115)
90 KOG1752 Glutaredoxin and relat 97.7 0.00019 4E-09 58.5 8.6 78 131-213 12-89 (104)
91 cd03041 GST_N_2GST_N GST_N fam 97.7 5.8E-05 1.2E-09 57.5 5.1 76 261-336 2-77 (77)
92 cd03182 GST_C_GTT2_like GST_C 97.6 7.2E-05 1.6E-09 60.7 3.7 104 225-338 1-114 (117)
93 cd03188 GST_C_Beta GST_C famil 97.5 6.8E-05 1.5E-09 60.3 2.7 54 275-338 48-107 (114)
94 cd03180 GST_C_2 GST_C family, 97.4 9.2E-05 2E-09 59.2 2.7 55 274-338 47-107 (110)
95 cd03186 GST_C_SspA GST_N famil 97.4 8.1E-05 1.8E-09 59.7 2.2 91 227-338 2-100 (107)
96 PRK12759 bifunctional gluaredo 97.4 0.00063 1.4E-08 68.3 8.2 69 134-210 3-79 (410)
97 PTZ00062 glutaredoxin; Provisi 97.3 0.0011 2.4E-08 60.5 8.9 72 133-212 113-189 (204)
98 cd03187 GST_C_Phi GST_C family 97.3 5.2E-05 1.1E-09 61.5 0.1 55 274-338 49-111 (118)
99 cd03179 GST_C_1 GST_C family, 97.3 0.00014 3E-09 57.7 2.3 53 274-335 47-104 (105)
100 cd03177 GST_C_Delta_Epsilon GS 97.3 0.00012 2.7E-09 59.9 1.9 55 274-338 42-103 (118)
101 cd03191 GST_C_Zeta GST_C famil 97.3 7.2E-05 1.6E-09 61.4 0.3 44 285-338 66-110 (121)
102 cd03031 GRX_GRX_like Glutaredo 97.2 0.0018 4E-08 56.0 8.5 70 135-212 2-81 (147)
103 cd03178 GST_C_Ure2p_like GST_C 97.2 0.00019 4.1E-09 57.9 1.9 54 275-338 45-105 (113)
104 cd02973 TRX_GRX_like Thioredox 97.0 0.0021 4.6E-08 47.1 6.0 60 134-203 2-64 (67)
105 PF00043 GST_C: Glutathione S- 97.0 0.00022 4.8E-09 55.6 0.6 46 283-338 46-94 (95)
106 cd03190 GST_C_ECM4_like GST_C 96.9 0.00051 1.1E-08 58.6 2.1 91 229-338 5-109 (142)
107 cd03185 GST_C_Tau GST_C family 96.8 0.00064 1.4E-08 55.8 1.6 94 227-338 2-106 (126)
108 cd03203 GST_C_Lambda GST_C fam 96.7 0.0014 3E-08 54.2 3.6 44 284-338 52-102 (120)
109 cd03206 GST_C_7 GST_C family, 96.7 0.00061 1.3E-08 54.0 1.2 55 274-338 37-97 (100)
110 cd03036 ArsC_like Arsenate Red 96.7 0.0018 3.9E-08 53.2 4.0 32 135-166 1-32 (111)
111 cd03195 GST_C_4 GST_C family, 96.7 0.0012 2.6E-08 54.1 2.9 94 227-338 2-104 (114)
112 cd03204 GST_C_GDAP1 GST_C fami 96.7 0.00078 1.7E-08 55.5 1.5 44 285-338 59-108 (111)
113 cd03184 GST_C_Omega GST_C fami 96.6 0.0011 2.3E-08 54.9 2.1 45 284-338 53-104 (124)
114 PRK01655 spxA transcriptional 96.6 0.0028 6E-08 53.7 4.6 33 134-166 1-33 (131)
115 cd03032 ArsC_Spx Arsenate Redu 96.6 0.005 1.1E-07 50.7 5.9 32 134-165 1-32 (115)
116 PF13410 GST_C_2: Glutathione 96.6 0.00062 1.3E-08 50.2 0.2 50 275-334 11-69 (69)
117 cd03198 GST_C_CLIC GST_C famil 96.6 0.00085 1.8E-08 57.2 1.0 45 284-338 64-115 (134)
118 cd03048 GST_N_Ure2p_like GST_N 96.5 0.0047 1E-07 47.1 4.8 75 262-337 3-80 (81)
119 cd02977 ArsC_family Arsenate R 96.5 0.0035 7.6E-08 50.6 4.3 32 135-166 1-32 (105)
120 cd03181 GST_C_EFB1gamma GST_C 96.5 0.00095 2.1E-08 54.6 1.0 94 228-337 1-106 (123)
121 PF14497 GST_C_3: Glutathione 96.5 0.0009 2E-08 53.1 0.7 41 285-336 57-98 (99)
122 PF13417 GST_N_3: Glutathione 96.4 0.0052 1.1E-07 46.3 4.6 72 264-338 2-73 (75)
123 cd03202 GST_C_etherase_LigE GS 96.3 0.0014 3.1E-08 54.6 1.1 54 274-337 62-123 (124)
124 PRK12559 transcriptional regul 96.3 0.011 2.3E-07 50.2 6.4 33 134-166 1-33 (131)
125 cd03207 GST_C_8 GST_C family, 96.2 0.0018 3.9E-08 51.4 0.9 54 275-338 35-93 (103)
126 PF10568 Tom37: Outer mitochon 96.2 0.021 4.4E-07 43.4 6.6 57 142-213 13-72 (72)
127 KOG3027 Mitochondrial outer me 96.2 0.012 2.7E-07 53.2 6.1 65 134-216 28-92 (257)
128 cd03183 GST_C_Theta GST_C fami 96.1 0.0024 5.1E-08 52.6 1.2 45 284-338 65-111 (126)
129 cd03193 GST_C_Metaxin GST_C fa 96.1 0.0022 4.8E-08 49.6 1.0 51 275-335 24-87 (88)
130 cd03040 GST_N_mPGES2 GST_N fam 96.1 0.014 3E-07 43.9 5.3 74 261-337 2-77 (77)
131 cd03201 GST_C_DHAR GST_C famil 96.1 0.0029 6.4E-08 52.6 1.6 45 284-338 50-101 (121)
132 PRK13344 spxA transcriptional 96.0 0.015 3.3E-07 49.3 5.9 33 134-166 1-33 (132)
133 cd03045 GST_N_Delta_Epsilon GS 96.0 0.0098 2.1E-07 44.2 4.0 70 262-333 2-73 (74)
134 TIGR01617 arsC_related transcr 95.9 0.01 2.2E-07 49.1 4.2 32 135-166 1-32 (117)
135 cd03197 GST_C_mPGES2 GST_C fam 95.9 0.0028 6E-08 54.9 0.7 53 275-337 88-145 (149)
136 cd03194 GST_C_3 GST_C family, 95.8 0.0067 1.4E-07 49.7 2.5 51 275-338 53-105 (114)
137 cd03209 GST_C_Mu GST_C family, 95.6 0.0054 1.2E-07 50.4 1.5 44 285-338 55-100 (121)
138 cd03059 GST_N_SspA GST_N famil 95.5 0.029 6.3E-07 41.4 5.0 71 263-336 3-73 (73)
139 cd03035 ArsC_Yffb Arsenate Red 95.5 0.032 7E-07 45.3 5.7 32 135-166 1-32 (105)
140 cd03052 GST_N_GDAP1 GST_N fami 95.4 0.023 4.9E-07 42.8 4.0 69 263-333 3-73 (73)
141 cd03058 GST_N_Tau GST_N family 95.4 0.038 8.2E-07 41.2 5.2 72 262-336 2-74 (74)
142 cd00299 GST_C_family Glutathio 95.2 0.004 8.8E-08 48.1 -0.6 51 275-335 41-100 (100)
143 cd03033 ArsC_15kD Arsenate Red 95.1 0.034 7.5E-07 45.9 4.5 31 135-165 2-32 (113)
144 TIGR00411 redox_disulf_1 small 95.0 0.17 3.7E-06 37.9 8.0 55 134-196 2-60 (82)
145 PF13409 GST_N_2: Glutathione 95.0 0.05 1.1E-06 40.5 4.9 65 269-334 2-69 (70)
146 cd03208 GST_C_Alpha GST_C fami 94.9 0.016 3.5E-07 49.1 2.1 45 284-338 60-106 (137)
147 cd03051 GST_N_GTT2_like GST_N 94.8 0.048 1E-06 40.0 4.3 71 262-333 2-74 (74)
148 cd03210 GST_C_Pi GST_C family, 94.8 0.014 3.1E-07 48.3 1.5 45 284-338 57-103 (126)
149 cd03056 GST_N_4 GST_N family, 94.7 0.049 1.1E-06 40.0 4.1 69 262-332 2-72 (73)
150 cd03053 GST_N_Phi GST_N family 94.7 0.058 1.3E-06 40.2 4.6 71 262-334 3-75 (76)
151 TIGR00412 redox_disulf_2 small 94.6 0.15 3.2E-06 38.7 6.6 54 135-202 3-60 (76)
152 PHA02125 thioredoxin-like prot 94.5 0.11 2.3E-06 39.2 5.8 52 134-195 1-52 (75)
153 cd03080 GST_N_Metaxin_like GST 94.4 0.071 1.5E-06 40.0 4.5 60 268-337 16-75 (75)
154 cd03060 GST_N_Omega_like GST_N 94.4 0.093 2E-06 38.8 5.0 68 263-332 3-70 (71)
155 cd03037 GST_N_GRX2 GST_N famil 94.3 0.12 2.6E-06 38.1 5.3 69 262-333 2-70 (71)
156 cd03050 GST_N_Theta GST_N fami 94.1 0.11 2.4E-06 38.9 5.0 72 263-336 3-76 (76)
157 PRK09481 sspA stringent starva 94.0 0.12 2.7E-06 46.6 5.9 76 260-338 10-85 (211)
158 cd03055 GST_N_Omega GST_N fami 94.0 0.11 2.3E-06 40.5 4.8 73 259-333 17-89 (89)
159 cd03192 GST_C_Sigma_like GST_C 94.0 0.021 4.6E-07 45.2 0.8 42 284-335 60-104 (104)
160 cd00570 GST_N_family Glutathio 93.9 0.081 1.8E-06 37.5 3.8 69 263-333 3-71 (71)
161 cd03211 GST_C_Metaxin2 GST_C f 93.9 0.0088 1.9E-07 50.1 -1.6 41 285-335 77-125 (126)
162 COG1393 ArsC Arsenate reductas 93.8 0.19 4.1E-06 41.8 6.1 32 134-165 2-33 (117)
163 cd01659 TRX_superfamily Thiore 93.7 0.19 4.2E-06 33.8 5.3 57 135-196 1-60 (69)
164 PRK10638 glutaredoxin 3; Provi 93.5 0.12 2.6E-06 39.6 4.3 72 261-334 4-75 (83)
165 KOG3028 Translocase of outer m 93.5 0.56 1.2E-05 45.2 9.5 87 142-244 16-104 (313)
166 PRK10853 putative reductase; P 93.4 0.11 2.4E-06 43.2 4.2 32 134-165 1-32 (118)
167 PRK10387 glutaredoxin 2; Provi 93.4 0.16 3.4E-06 45.4 5.5 72 262-338 2-75 (210)
168 cd03212 GST_C_Metaxin1_3 GST_C 93.3 0.022 4.7E-07 48.5 -0.2 43 285-337 84-134 (137)
169 PF05768 DUF836: Glutaredoxin- 93.3 0.33 7.1E-06 37.3 6.4 53 135-196 2-56 (81)
170 TIGR01616 nitro_assoc nitrogen 93.2 0.14 3.1E-06 43.1 4.6 32 134-165 2-33 (126)
171 cd03047 GST_N_2 GST_N family, 93.2 0.14 3.1E-06 37.9 4.1 68 263-332 3-72 (73)
172 PRK10026 arsenate reductase; P 93.2 0.15 3.3E-06 43.8 4.7 32 134-165 3-34 (141)
173 cd03030 GRX_SH3BGR Glutaredoxi 93.2 0.79 1.7E-05 36.4 8.5 68 135-210 2-79 (92)
174 cd03044 GST_N_EF1Bgamma GST_N 93.1 0.17 3.7E-06 37.9 4.4 71 263-335 3-75 (75)
175 cd03039 GST_N_Sigma_like GST_N 93.0 0.08 1.7E-06 39.2 2.5 70 263-334 3-72 (72)
176 cd03042 GST_N_Zeta GST_N famil 92.9 0.15 3.3E-06 37.3 4.0 69 263-333 3-73 (73)
177 cd03049 GST_N_3 GST_N family, 92.8 0.2 4.4E-06 37.0 4.6 70 262-333 2-73 (73)
178 cd03076 GST_N_Pi GST_N family, 92.8 0.11 2.3E-06 38.9 3.0 70 262-334 3-72 (73)
179 cd03057 GST_N_Beta GST_N famil 92.8 0.27 5.8E-06 36.7 5.2 64 272-336 11-76 (77)
180 cd03026 AhpF_NTD_C TRX-GRX-lik 92.6 0.37 8E-06 37.9 5.9 58 134-203 15-77 (89)
181 cd03205 GST_C_6 GST_C family, 92.5 0.033 7.2E-07 43.9 -0.1 52 274-335 41-98 (98)
182 cd03029 GRX_hybridPRX5 Glutare 92.5 0.27 5.8E-06 36.4 4.8 69 261-332 3-71 (72)
183 COG4545 Glutaredoxin-related p 92.3 0.39 8.5E-06 36.7 5.3 63 135-203 4-77 (85)
184 cd03061 GST_N_CLIC GST_N famil 92.2 0.46 1E-05 37.7 6.0 70 267-339 20-89 (91)
185 TIGR02182 GRXB Glutaredoxin, G 92.0 0.32 7E-06 43.9 5.6 71 263-338 2-74 (209)
186 TIGR02190 GlrX-dom Glutaredoxi 91.9 0.32 6.9E-06 37.0 4.7 71 259-332 8-78 (79)
187 COG0625 Gst Glutathione S-tran 91.7 0.46 1E-05 42.6 6.2 76 263-339 3-79 (211)
188 PRK15113 glutathione S-transfe 91.5 0.32 6.8E-06 44.0 5.0 77 261-339 6-86 (214)
189 cd03046 GST_N_GTT1_like GST_N 91.4 0.32 6.9E-06 36.0 4.1 65 271-337 10-76 (76)
190 cd03034 ArsC_ArsC Arsenate Red 91.3 0.31 6.7E-06 39.9 4.3 31 135-165 1-31 (112)
191 COG2999 GrxB Glutaredoxin 2 [P 91.3 0.4 8.6E-06 42.8 5.1 71 262-337 2-74 (215)
192 TIGR00014 arsC arsenate reduct 91.2 0.33 7.1E-06 40.0 4.3 31 135-165 1-31 (114)
193 TIGR01262 maiA maleylacetoacet 90.7 0.51 1.1E-05 42.1 5.6 74 263-338 2-78 (210)
194 PRK11752 putative S-transferas 90.3 0.48 1E-05 44.6 5.1 76 259-337 43-130 (264)
195 cd03027 GRX_DEP Glutaredoxin ( 90.2 0.3 6.5E-06 36.3 3.0 68 261-330 3-70 (73)
196 cd03038 GST_N_etherase_LigE GS 90.2 0.68 1.5E-05 35.3 5.1 67 268-336 15-83 (84)
197 PLN02473 glutathione S-transfe 90.1 0.51 1.1E-05 42.3 5.0 75 262-338 4-80 (214)
198 TIGR02196 GlrX_YruB Glutaredox 89.4 0.46 1E-05 34.3 3.4 69 262-332 3-73 (74)
199 COG0278 Glutaredoxin-related p 89.1 2.3 4.9E-05 34.5 7.3 75 131-212 13-92 (105)
200 cd03054 GST_N_Metaxin GST_N fa 87.7 1.2 2.5E-05 32.8 4.7 57 268-334 15-71 (72)
201 PF11287 DUF3088: Protein of u 87.6 1.7 3.7E-05 35.8 5.8 71 143-219 24-110 (112)
202 TIGR02181 GRX_bact Glutaredoxi 87.6 0.93 2E-05 34.0 4.2 69 263-333 3-71 (79)
203 cd02066 GRX_family Glutaredoxi 87.3 0.79 1.7E-05 32.7 3.5 67 263-331 4-70 (72)
204 PF09635 MetRS-N: MetRS-N bind 87.2 0.39 8.5E-06 40.1 2.0 35 184-218 30-64 (122)
205 PTZ00062 glutaredoxin; Provisi 86.6 10 0.00022 34.6 11.1 161 135-332 21-189 (204)
206 cd02976 NrdH NrdH-redoxin (Nrd 86.5 0.93 2E-05 32.6 3.5 69 263-331 4-72 (73)
207 KOG0867 Glutathione S-transfer 85.8 1.2 2.5E-05 41.1 4.6 72 262-337 4-79 (226)
208 TIGR02183 GRXA Glutaredoxin, G 85.3 1.6 3.5E-05 33.7 4.5 73 263-337 4-83 (86)
209 PRK11200 grxA glutaredoxin 1; 84.9 1.9 4.2E-05 32.9 4.8 74 262-337 4-84 (85)
210 cd03418 GRX_GRXb_1_3_like Glut 84.9 1.4 3E-05 32.5 3.8 70 262-333 3-73 (75)
211 TIGR00862 O-ClC intracellular 84.8 2.6 5.6E-05 39.3 6.4 69 267-338 17-85 (236)
212 PF13192 Thioredoxin_3: Thiore 84.8 3.2 6.9E-05 31.2 5.8 56 135-204 3-62 (76)
213 PLN02378 glutathione S-transfe 84.7 2.2 4.7E-05 38.6 5.8 70 266-338 17-86 (213)
214 PRK13972 GSH-dependent disulfi 84.0 1.5 3.3E-05 39.4 4.4 69 269-337 9-84 (215)
215 PRK10357 putative glutathione 83.3 3 6.5E-05 36.9 6.0 73 263-337 3-75 (202)
216 TIGR02194 GlrX_NrdH Glutaredox 82.9 1.4 3.1E-05 32.6 3.1 52 263-315 3-54 (72)
217 PF00462 Glutaredoxin: Glutare 82.2 1.1 2.5E-05 31.7 2.3 52 263-314 3-54 (60)
218 PTZ00057 glutathione s-transfe 82.1 1.9 4.1E-05 38.6 4.2 76 261-338 5-85 (205)
219 cd02955 SSP411 TRX domain, SSP 81.9 3.1 6.6E-05 34.8 5.1 69 133-205 16-97 (124)
220 TIGR02187 GlrX_arch Glutaredox 81.8 26 0.00056 31.7 11.6 172 133-334 21-214 (215)
221 TIGR02200 GlrX_actino Glutared 80.3 4.7 0.0001 29.4 5.2 71 263-333 4-76 (77)
222 cd02975 PfPDO_like_N Pyrococcu 80.1 3.9 8.4E-05 33.3 5.1 54 134-195 24-81 (113)
223 TIGR02187 GlrX_arch Glutaredox 79.4 9 0.0002 34.7 7.8 60 133-200 135-197 (215)
224 TIGR01295 PedC_BrcD bacterioci 79.3 8.1 0.00017 32.0 6.8 68 134-201 26-102 (122)
225 PF03960 ArsC: ArsC family; I 78.7 2.6 5.6E-05 34.1 3.6 27 138-164 1-27 (110)
226 cd03077 GST_N_Alpha GST_N fami 78.6 3.2 6.9E-05 31.4 3.9 72 263-337 4-77 (79)
227 PRK15317 alkyl hydroperoxide r 78.0 2.8 6E-05 43.3 4.4 78 132-216 117-198 (517)
228 PF02798 GST_N: Glutathione S- 77.0 2.9 6.3E-05 31.3 3.2 62 272-334 12-76 (76)
229 PLN02817 glutathione dehydroge 76.5 5.9 0.00013 37.4 5.9 69 267-338 71-139 (265)
230 TIGR03140 AhpF alkyl hydropero 75.7 2.8 6.1E-05 43.3 3.7 76 133-215 119-198 (515)
231 TIGR00365 monothiol glutaredox 75.7 4.7 0.0001 32.0 4.2 65 267-333 25-89 (97)
232 cd03419 GRX_GRXh_1_2_like Glut 75.6 6.7 0.00015 29.1 4.9 70 263-334 4-76 (82)
233 PRK10329 glutaredoxin-like pro 74.7 6.2 0.00013 30.3 4.5 71 262-333 4-74 (81)
234 PF00085 Thioredoxin: Thioredo 73.8 29 0.00064 26.3 8.4 73 134-214 20-102 (103)
235 COG0695 GrxC Glutaredoxin and 73.6 3.9 8.5E-05 31.3 3.2 54 262-315 4-59 (80)
236 cd03043 GST_N_1 GST_N family, 73.1 8.6 0.00019 28.4 4.9 63 268-332 9-72 (73)
237 cd02953 DsbDgamma DsbD gamma f 72.9 12 0.00025 29.3 5.9 57 134-194 14-77 (104)
238 cd02949 TRX_NTR TRX domain, no 72.3 18 0.00039 28.0 6.9 60 134-201 16-79 (97)
239 KOG0406 Glutathione S-transfer 71.9 8.7 0.00019 35.8 5.5 77 259-340 8-87 (231)
240 cd02947 TRX_family TRX family; 71.9 15 0.00033 26.8 6.1 57 134-200 13-74 (93)
241 TIGR03143 AhpF_homolog putativ 71.5 8.9 0.00019 40.0 6.2 53 134-196 479-536 (555)
242 PRK10542 glutathionine S-trans 71.0 9.2 0.0002 33.6 5.5 67 271-338 10-79 (201)
243 cd03028 GRX_PICOT_like Glutare 70.5 7.8 0.00017 30.1 4.3 65 267-333 21-85 (90)
244 COG3011 Predicted thiol-disulf 68.2 21 0.00045 30.6 6.6 79 130-216 6-87 (137)
245 PLN02395 glutathione S-transfe 68.1 12 0.00026 33.3 5.6 66 271-338 12-79 (215)
246 cd02984 TRX_PICOT TRX domain, 67.6 16 0.00034 27.9 5.6 59 135-201 18-80 (97)
247 TIGR02189 GlrX-like_plant Glut 67.1 12 0.00026 29.7 4.8 55 260-314 9-66 (99)
248 KOG0911 Glutaredoxin-related p 66.5 11 0.00025 34.7 5.0 74 132-213 138-216 (227)
249 cd03075 GST_N_Mu GST_N family, 65.5 9.3 0.0002 29.1 3.7 66 268-336 8-82 (82)
250 PHA03050 glutaredoxin; Provisi 64.7 11 0.00023 30.7 4.1 69 260-330 14-88 (108)
251 KOG3029 Glutathione S-transfer 62.9 11 0.00025 36.1 4.4 71 259-336 89-161 (370)
252 cd03079 GST_N_Metaxin2 GST_N f 62.0 12 0.00026 28.5 3.6 58 268-334 16-73 (74)
253 TIGR01068 thioredoxin thioredo 61.4 48 0.001 24.9 7.2 53 135-195 18-74 (101)
254 cd02989 Phd_like_TxnDC9 Phosdu 61.3 23 0.00051 28.6 5.6 62 134-203 25-89 (113)
255 PHA03075 glutaredoxin-like pro 60.7 14 0.00031 30.7 4.1 67 133-215 3-69 (123)
256 cd02963 TRX_DnaJ TRX domain, D 59.0 54 0.0012 26.2 7.3 59 134-200 27-90 (111)
257 cd02959 ERp19 Endoplasmic reti 57.7 35 0.00076 27.8 6.1 21 135-155 23-43 (117)
258 PRK10996 thioredoxin 2; Provis 57.5 87 0.0019 26.2 8.7 60 134-201 55-118 (139)
259 PRK09381 trxA thioredoxin; Pro 57.4 53 0.0011 25.7 7.0 59 135-201 25-87 (109)
260 PF04908 SH3BGR: SH3-binding, 57.2 57 0.0012 26.2 7.0 62 134-203 2-78 (99)
261 cd02994 PDI_a_TMX PDIa family, 56.9 87 0.0019 24.0 8.5 58 134-199 19-81 (101)
262 PF13098 Thioredoxin_2: Thiore 55.6 11 0.00024 29.7 2.7 21 134-154 8-28 (112)
263 cd02951 SoxW SoxW family; SoxW 55.5 59 0.0013 26.2 7.2 18 134-151 17-34 (125)
264 PRK10877 protein disulfide iso 54.6 25 0.00055 32.5 5.3 34 131-164 107-141 (232)
265 PTZ00051 thioredoxin; Provisio 54.2 73 0.0016 24.2 7.2 60 134-201 21-83 (98)
266 cd03020 DsbA_DsbC_DsbG DsbA fa 52.9 27 0.0006 30.9 5.1 24 132-155 78-101 (197)
267 cd03078 GST_N_Metaxin1_like GS 52.9 37 0.00081 25.3 5.1 57 268-334 15-71 (73)
268 PHA02278 thioredoxin-like prot 52.7 75 0.0016 25.4 7.1 64 135-202 18-85 (103)
269 cd02997 PDI_a_PDIR PDIa family 52.4 78 0.0017 24.1 7.1 61 134-200 20-86 (104)
270 cd02954 DIM1 Dim1 family; Dim1 52.4 46 0.001 27.4 5.9 58 135-200 18-79 (114)
271 cd03199 GST_C_GRX2 GST_C famil 49.8 21 0.00045 30.2 3.5 57 273-341 63-125 (128)
272 cd02993 PDI_a_APS_reductase PD 48.6 63 0.0014 25.5 6.2 55 134-194 24-83 (109)
273 cd02950 TxlA TRX-like protein 47.9 1.7E+02 0.0036 24.6 9.7 60 135-201 24-89 (142)
274 cd03023 DsbA_Com1_like DsbA fa 43.9 22 0.00048 29.2 2.9 23 133-155 7-29 (154)
275 cd02961 PDI_a_family Protein D 42.4 1.2E+02 0.0025 22.4 6.6 54 133-194 17-76 (101)
276 cd03004 PDI_a_ERdj5_C PDIa fam 42.3 67 0.0014 24.8 5.3 53 134-194 22-78 (104)
277 PRK11657 dsbG disulfide isomer 41.9 29 0.00063 32.5 3.6 23 133-155 119-141 (251)
278 cd03036 ArsC_like Arsenate Red 41.2 30 0.00066 28.0 3.2 43 263-305 3-45 (111)
279 TIGR02180 GRX_euk Glutaredoxin 40.6 69 0.0015 23.5 4.9 67 266-334 6-77 (84)
280 PF04134 DUF393: Protein of un 40.5 48 0.001 26.4 4.3 69 139-215 3-77 (114)
281 PF01323 DSBA: DSBA-like thior 40.0 45 0.00098 28.8 4.4 33 135-167 2-39 (193)
282 cd02970 PRX_like2 Peroxiredoxi 38.9 30 0.00064 28.4 2.9 57 134-196 25-88 (149)
283 cd02952 TRP14_like Human TRX-r 38.7 1.6E+02 0.0034 24.4 7.1 64 141-204 38-105 (119)
284 cd02977 ArsC_family Arsenate R 38.1 38 0.00082 26.8 3.2 43 263-305 3-45 (105)
285 cd02956 ybbN ybbN protein fami 38.1 1.7E+02 0.0037 21.9 7.3 58 135-200 16-77 (96)
286 PRK10824 glutaredoxin-4; Provi 37.2 59 0.0013 26.8 4.3 48 267-314 28-75 (115)
287 cd02996 PDI_a_ERp44 PDIa famil 36.8 1E+02 0.0023 24.0 5.7 54 134-195 21-84 (108)
288 cd03003 PDI_a_ERdj5_N PDIa fam 36.6 1.6E+02 0.0036 22.5 6.7 53 134-194 21-77 (101)
289 cd02948 TRX_NDPK TRX domain, T 36.3 59 0.0013 25.4 4.1 57 135-200 21-82 (102)
290 cd03002 PDI_a_MPD1_like PDI fa 36.1 1.7E+02 0.0036 22.6 6.7 55 134-194 21-79 (109)
291 cd02972 DsbA_family DsbA famil 35.9 60 0.0013 23.9 4.0 22 135-156 1-22 (98)
292 cd03000 PDI_a_TMX3 PDIa family 35.6 1.8E+02 0.0039 22.5 6.8 54 134-195 18-78 (104)
293 PRK03147 thiol-disulfide oxido 35.2 1.1E+02 0.0023 25.9 5.9 19 135-153 65-83 (173)
294 KOG2501 Thioredoxin, nucleored 34.6 1.1E+02 0.0024 26.8 5.7 35 133-167 34-76 (157)
295 cd02985 TRX_CDSP32 TRX family, 34.5 65 0.0014 25.2 4.1 62 135-201 19-83 (103)
296 TIGR01126 pdi_dom protein disu 34.0 68 0.0015 24.2 4.1 52 134-193 16-73 (102)
297 PRK00293 dipZ thiol:disulfide 33.7 2.3E+02 0.005 29.8 9.1 55 135-194 478-539 (571)
298 PTZ00443 Thioredoxin domain-co 33.5 2.9E+02 0.0062 25.5 8.7 77 134-218 55-141 (224)
299 PF13728 TraF: F plasmid trans 33.0 2.1E+02 0.0045 26.1 7.6 64 134-198 123-194 (215)
300 PF08534 Redoxin: Redoxin; In 32.9 2.1E+02 0.0045 23.4 7.2 49 142-196 40-93 (146)
301 cd03021 DsbA_GSTK DsbA family, 32.8 77 0.0017 28.3 4.7 34 134-167 2-39 (209)
302 PRK01655 spxA transcriptional 32.7 43 0.00094 28.0 2.9 44 262-305 3-46 (131)
303 cd03032 ArsC_Spx Arsenate Redu 32.3 46 0.001 27.0 2.9 44 262-305 3-46 (115)
304 cd02967 mauD Methylamine utili 32.0 51 0.0011 25.8 3.1 22 135-156 25-46 (114)
305 cd02962 TMX2 TMX2 family; comp 31.9 1.3E+02 0.0028 26.0 5.8 61 135-202 51-121 (152)
306 cd03024 DsbA_FrnE DsbA family, 31.1 77 0.0017 27.7 4.4 34 135-168 1-42 (201)
307 PF13462 Thioredoxin_4: Thiore 29.7 60 0.0013 27.0 3.4 24 131-154 12-35 (162)
308 KOG0868 Glutathione S-transfer 29.7 73 0.0016 28.8 3.8 73 262-338 7-84 (217)
309 PLN02309 5'-adenylylsulfate re 28.9 1.3E+02 0.0028 30.9 6.1 56 134-195 368-428 (457)
310 cd03005 PDI_a_ERp46 PDIa famil 27.8 2.3E+02 0.005 21.3 6.2 53 134-194 19-78 (102)
311 cd02998 PDI_a_ERp38 PDIa famil 27.5 99 0.0021 23.4 4.0 54 134-194 21-80 (105)
312 KOG1147 Glutamyl-tRNA syntheta 27.3 16 0.00035 38.1 -0.7 96 199-333 45-150 (712)
313 KOG1695 Glutathione S-transfer 27.1 1E+02 0.0023 28.1 4.5 65 270-337 13-77 (206)
314 cd03022 DsbA_HCCA_Iso DsbA fam 26.8 90 0.002 26.9 4.0 31 135-165 1-35 (192)
315 cd03008 TryX_like_RdCVF Trypar 26.4 4.1E+02 0.0089 22.7 7.9 45 134-181 27-84 (146)
316 PF14595 Thioredoxin_9: Thiore 26.4 25 0.00053 29.5 0.3 56 133-195 43-103 (129)
317 COG3019 Predicted metal-bindin 26.3 1E+02 0.0022 26.6 4.0 33 133-165 26-58 (149)
318 PRK13728 conjugal transfer pro 24.4 1.3E+02 0.0028 26.9 4.5 22 135-156 73-94 (181)
319 cd02966 TlpA_like_family TlpA- 23.8 1.2E+02 0.0026 22.8 3.8 23 134-156 22-44 (116)
320 PRK15412 thiol:disulfide inter 23.7 2.3E+02 0.0049 24.8 6.0 55 137-196 74-130 (185)
321 TIGR01617 arsC_related transcr 23.4 79 0.0017 25.6 2.8 43 263-305 3-45 (117)
322 cd03031 GRX_GRX_like Glutaredo 22.7 1.2E+02 0.0025 26.2 3.8 47 268-314 15-65 (147)
323 cd03001 PDI_a_P5 PDIa family, 22.6 3.4E+02 0.0073 20.4 6.6 53 134-194 21-77 (103)
324 cd02957 Phd_like Phosducin (Ph 22.5 1.4E+02 0.003 23.7 4.1 59 135-202 28-89 (113)
325 PF00578 AhpC-TSA: AhpC/TSA fa 22.5 2.4E+02 0.0052 22.0 5.5 58 133-196 26-90 (124)
326 cd02999 PDI_a_ERp44_like PDIa 22.5 93 0.002 24.4 3.0 23 134-156 21-43 (100)
327 cd03011 TlpA_like_ScsD_MtbDsbE 22.0 1.7E+02 0.0038 23.0 4.6 59 134-196 23-81 (123)
328 PF03884 DUF329: Domain of unk 21.7 36 0.00078 24.7 0.4 44 10-53 10-53 (57)
329 cd02958 UAS UAS family; UAS is 21.3 3.8E+02 0.0082 21.1 6.4 62 133-200 18-89 (114)
330 TIGR00385 dsbE periplasmic pro 21.2 2.4E+02 0.0053 24.2 5.6 32 135-166 67-99 (173)
331 cd03025 DsbA_FrnE_like DsbA fa 20.9 1.5E+02 0.0032 25.5 4.3 30 134-163 2-37 (193)
332 PF04399 Glutaredoxin2_C: Glut 20.7 59 0.0013 27.6 1.5 56 272-339 61-122 (132)
333 PF06110 DUF953: Eukaryotic pr 20.7 1.6E+02 0.0036 24.4 4.2 62 141-206 36-106 (119)
334 cd02995 PDI_a_PDI_a'_C PDIa fa 20.5 1.1E+02 0.0023 23.3 2.9 23 134-156 21-43 (104)
335 COG2143 Thioredoxin-related pr 20.4 4.8E+02 0.01 23.2 7.0 16 133-148 44-59 (182)
336 PF03190 Thioredox_DsbH: Prote 20.4 65 0.0014 28.4 1.8 65 137-202 43-116 (163)
337 cd03010 TlpA_like_DsbE TlpA-li 20.4 2.1E+02 0.0046 22.8 4.8 32 135-166 29-62 (127)
338 TIGR01130 ER_PDI_fam protein d 20.2 5.7E+02 0.012 25.1 8.8 76 134-217 21-110 (462)
No 1
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.93 E-value=4.8e-26 Score=206.86 Aligned_cols=177 Identities=19% Similarity=0.242 Sum_probs=128.9
Q ss_pred CcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHH
Q 019273 133 TRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYL 212 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL 212 (343)
.+++||+++.||+|++|+++|+|+|++||.+.||+ +++.++++ ++||.|+||+|+|+ |.+|+||.||++||
T Consensus 9 ~~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~------~~~~~~~~-~~nP~g~VPvL~~~--g~~l~ES~AIl~YL 79 (211)
T PRK09481 9 SVMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEK------DNLPQDLI-DLNPYQSVPTLVDR--ELTLYESRIIMEYL 79 (211)
T ss_pred CeeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCc------ccCCHHHH-HhCCCCCCCEEEEC--CEEeeCHHHHHHHH
Confidence 37999999999999999999999999999988774 24556777 99999999999985 89999999999999
Q ss_pred hhhcCCCCCCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhc-----cCcc
Q 019273 213 FQQYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELE-----LPYI 287 (343)
Q Consensus 213 ~~~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le-----~pyL 287 (343)
+++|+...+.|.++.+|+.+.+|+.++...+..... ..... .+ ...+ .....+.+.|..+| .+|+
T Consensus 80 ~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~~-------~~~~~l~~~l~~le~~L~~~~~l 149 (211)
T PRK09481 80 DERFPHPPLMPVYPVARGESRLMMHRIEKDWYSLMN-KIVNG-SA-SEAD-------AARKQLREELLAIAPVFGEKPYF 149 (211)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHhcC-CH-HHHH-------HHHHHHHHHHHHHHHHhccCCcc
Confidence 999987666678888999999999875443321110 00000 00 0000 01112333444443 3999
Q ss_pred cccccccCCccchhHhhhCCCeEeEEE-cCCCCCCC--CChHHHHHHHHHHhcC
Q 019273 288 LQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQI--GDYKKILSYLFQSYSA 338 (343)
Q Consensus 288 ~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l--~e~p~I~awl~r~~~~ 338 (343)
+|+++| +||++ ++|++. ....++++ .++|+|.+|++++.++
T Consensus 150 ---~G~~~t----~AD~~---l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~r 193 (211)
T PRK09481 150 ---MSEEFS----LVDCY---LAPLLWRLPVLGIELSGPGAKELKGYMTRVFER 193 (211)
T ss_pred ---cCCCcc----HHHHH---HHHHHHHHHhcCCCCCCCCChhHHHHHHHHhcc
Confidence 999999 99999 666654 22234444 5799999999999865
No 2
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.92 E-value=3.5e-25 Score=201.48 Aligned_cols=183 Identities=19% Similarity=0.257 Sum_probs=128.7
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC---CCC--eeecCHHHH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP---NTG--VSMYESGDI 208 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~---n~g--~~l~ES~aI 208 (343)
|++||+.+ +|+|++|+++|+|+||+|+.+.||+ .+++++.++++ ++||.|+||+|+|+ ++| .+|+||.||
T Consensus 1 m~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~---~~~~~~~~~~~-~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI 75 (215)
T PRK13972 1 MIDLYFAP-TPNGHKITLFLEEAELDYRLIKVDL---GKGGQFRPEFL-RISPNNKIPAIVDHSPADGGEPLSLFESGAI 75 (215)
T ss_pred CeEEEECC-CCChHHHHHHHHHcCCCcEEEEecC---cccccCCHHHH-hhCcCCCCCEEEeCCCCCCCCceeEEcHHHH
Confidence 58999887 7999999999999999999998886 34566678887 99999999999973 235 579999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHhhhhHHHhhccchhh--hhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc--
Q 019273 209 VNYLFQQYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTL--WEKARPDPPSKKLELFSYENNPYARIVREALCELEL-- 284 (343)
Q Consensus 209 ~~YL~~~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~~~--~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~-- 284 (343)
++||+++|+ .++|.++.+|+++.+|+.+....+..... .............. .......+.+.|..||.
T Consensus 76 ~~YL~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~le~~L 148 (215)
T PRK13972 76 LLYLAEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYA-----IERYQVETQRLYHVLNKRL 148 (215)
T ss_pred HHHHHHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchH-----HHHHHHHHHHHHHHHHHHh
Confidence 999999985 35577889999999999876554432110 00000000000000 00112234555555543
Q ss_pred ---CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 285 ---PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 ---pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|+ +||++| +|||+ +++++. ....+..+.+||+|.+|++++.++
T Consensus 149 ~~~~~l---~Gd~~t----~ADi~---l~~~~~~~~~~~~~~~~~P~l~~w~~r~~~r 196 (215)
T PRK13972 149 ENSPWL---GGENYS----IADIA---CWPWVNAWTRQRIDLAMYPAVKNWHERIRSR 196 (215)
T ss_pred ccCccc---cCCCCC----HHHHH---HHHHHHHHhhcCCcchhCHHHHHHHHHHHhC
Confidence 899 999999 99999 545432 112345578899999999999764
No 3
>PRK11752 putative S-transferase; Provisional
Probab=99.92 E-value=8.1e-25 Score=206.08 Aligned_cols=208 Identities=19% Similarity=0.250 Sum_probs=145.1
Q ss_pred hhhhcccCCCCCCcccccCCCCccccCCCCCCCcEEEEEeCCChhHHHHHHHHHHc------CCCeEEEEeeeecCCCCC
Q 019273 101 TSSLSTLARLPWGSRSLSEGSDTQEISNSDSPTRLQLFEFEACPFCRRVREAITEL------DLSVEWMYEQVFPCPKGS 174 (343)
Q Consensus 101 ~~~la~~~r~~~G~~~~~~~~~~~~~~~~~~~~~l~LY~~~~~P~~~rvr~~L~el------gl~ye~~~vdl~~~~~~~ 174 (343)
++++|.+.|...|..... ..+...++|+||+.. ||+|+||+++|+|+ |++|+.+.|++. +++
T Consensus 19 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~---~~~ 86 (264)
T PRK11752 19 GGAFANINRPVAGATHEK--------TLPVGKHPLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIG---EGD 86 (264)
T ss_pred CCcccccCCCCCCcchhc--------ccCCCCCCeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCc---ccc
Confidence 577888888888876655 334566789999976 99999999999997 999999988863 455
Q ss_pred cccHHHHHhhCCCceeeEEEcCC--CCeeecCHHHHHHHHhhhcCCCCCCCCCHHHHHHHHhhhhHHHhhccch-hhhhh
Q 019273 175 IRHREMVRRLGGKEQFPFLIDPN--TGVSMYESGDIVNYLFQQYGKGRSPSTGLLESTLITGWMPTIFRAGRGM-TLWEK 251 (343)
Q Consensus 175 ~~~~~~l~~~np~~~VP~Lvd~n--~g~~l~ES~aI~~YL~~~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~-~~~~~ 251 (343)
+..++++ ++||.|+||+|+|++ +|++|+||.||++||+++|+. +.|.++.+|+++++|+.+........ ..+..
T Consensus 87 ~~~~e~~-~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~~--L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~ 163 (264)
T PRK11752 87 QFSSGFV-EINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGA--FLPKDLAARTETLNWLFWQQGSAPFLGGGFGH 163 (264)
T ss_pred ccCHHHH-hhCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcCC--cCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 6677887 999999999999863 247899999999999999973 45678889999999998754432100 00000
Q ss_pred -cCCCCCcchhhhhccCCChHHHHHHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE---c-----CC
Q 019273 252 -ARPDPPSKKLELFSYENNPYARIVREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI---D-----PN 317 (343)
Q Consensus 252 -~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~---~-----~~ 317 (343)
... .+...... ...+...+.+.|..||. +|+ +||++| +|||+ +++++. . ..
T Consensus 164 ~~~~-~~~~~~~~----~~~~~~~~~~~L~~le~~L~~~~fl---~Gd~~T----lADi~---l~~~l~~l~~~~~~~~~ 228 (264)
T PRK11752 164 FYAY-APEKIEYA----INRFTMEAKRQLDVLDKQLAEHEYI---AGDEYT----IADIA---IWPWYGNLVLGNLYDAA 228 (264)
T ss_pred HHHh-CCccchHH----HHHHHHHHHHHHHHHHHHhccCCCC---CCCccC----HHHHH---HHHHHHHHhhccccccc
Confidence 000 01000000 01122235555655543 899 999999 99999 444321 1 11
Q ss_pred CCCCCCChHHHHHHHHHHhcC
Q 019273 318 TSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 318 ~g~~l~e~p~I~awl~r~~~~ 338 (343)
...++.+||+|.+|++++.++
T Consensus 229 ~~~~~~~~P~L~~w~~rv~~r 249 (264)
T PRK11752 229 EFLDVGSYKHVQRWAKEIAER 249 (264)
T ss_pred cccCcccCHHHHHHHHHHHhC
Confidence 123467899999999999764
No 4
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=2.3e-24 Score=195.33 Aligned_cols=185 Identities=22% Similarity=0.310 Sum_probs=129.0
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+.+.||+|+||+++|.|+|++|+.+.|++. . ++..++++ ++||.|+||+|+++ +|.+|+||.||++||++
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~---~-~~~~~~~~-~~nP~gkVPvL~~~-~~~~l~ES~AI~~YL~~ 74 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLD---A-EQKPPDFL-ALNPLGKVPALVDD-DGEVLTESGAILEYLAE 74 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCcc---c-ccCCHHHH-hcCCCCCCCEEeeC-CCCeeecHHHHHHHHHh
Confidence 5799999999999999999999999999999863 2 45667777 99999999999997 34489999999999999
Q ss_pred hcCCCCCCCCCHH---HHHHHHhhhhHHHhhccchhh-hhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc-----C
Q 019273 215 QYGKGRSPSTGLL---ESTLITGWMPTIFRAGRGMTL-WEKARPDPPSKKLELFSYENNPYARIVREALCELEL-----P 285 (343)
Q Consensus 215 ~y~~~~~~p~~~~---era~v~~Wl~~~~~~~~g~~~-~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~-----p 285 (343)
+|++..+.|.++. +|+.+..|+.+....+..... ..... ....... ..-........+...+..+|. +
T Consensus 75 ~~~~~~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~~~ 151 (211)
T COG0625 75 RYPGPPLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRAL-LGSEPEL--LEAALEAARAEIRALLALLEALLADGP 151 (211)
T ss_pred hCCCCCcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhh-ccccccc--cHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 9998645566653 789999999887554442110 00000 0000000 000000112235555555543 8
Q ss_pred cccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 286 YILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 286 yL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
|+ +||++| +||++ ..+.+. ....+....++|+|.+|++|+.++
T Consensus 152 ~l---~G~~~t----iAD~~---~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~r 195 (211)
T COG0625 152 YL---AGDRFT----IADIA---LAPLLWRLALLGEELADYPALKAWYERVLAR 195 (211)
T ss_pred cc---cCCCCC----HHHHH---HHHHHHHhhhcCcccccChHHHHHHHHHHcC
Confidence 99 999999 99999 443333 233344457899999999999743
No 5
>PRK15113 glutathione S-transferase; Provisional
Probab=99.91 E-value=5.4e-24 Score=193.77 Aligned_cols=182 Identities=13% Similarity=0.102 Sum_probs=126.2
Q ss_pred CcEEEEEeC--CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHH
Q 019273 133 TRLQLFEFE--ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVN 210 (343)
Q Consensus 133 ~~l~LY~~~--~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~ 210 (343)
.+++||+.+ .||+|++|+++|+|+||+|+.+.+|+ .++++..++++ ++||.|+||+|+|+ |.+|+||.||++
T Consensus 4 ~~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~---~~~~~~~~~~~-~~nP~g~VP~L~~~--~~~l~ES~aI~~ 77 (214)
T PRK15113 4 PAITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDL---DAGEHLQPTYQ-GYSLTRRVPTLQHD--DFELSESSAIAE 77 (214)
T ss_pred CeEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCC---CCccccCHHHH-hcCCCCCCCEEEEC--CEEEecHHHHHH
Confidence 368999975 69999999999999999999998886 34566677887 99999999999985 889999999999
Q ss_pred HHhhhcCCCC---CCCCCHHHHHHHHhhhhHHHhhccchhhhhhc-C-CCCCcchhhhhccCCChHHHHHHHHHHHhcc-
Q 019273 211 YLFQQYGKGR---SPSTGLLESTLITGWMPTIFRAGRGMTLWEKA-R-PDPPSKKLELFSYENNPYARIVREALCELEL- 284 (343)
Q Consensus 211 YL~~~y~~~~---~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~-~-~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~- 284 (343)
||+++|++.. +.|.++.+|+++.+|+.+....+.... .... . ...+... .-........+.+.|..+|.
T Consensus 78 YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~le~~ 152 (214)
T PRK15113 78 YLEERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLR-EERPTDVVFAGAKK----APLSEAGKAAAEKLFAVAERL 152 (214)
T ss_pred HHHHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHh-ccCccchhccCCCC----CcccHHHHHHHHHHHHHHHHH
Confidence 9999998654 667899999999999987755443110 0000 0 0000000 00000111223444444332
Q ss_pred -----CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 285 -----PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 -----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|+ +|+ +| +|||+ +++++. ....+..+. |+|.+|.+|+.++
T Consensus 153 L~~~~~~l---~G~-~T----lADi~---l~~~l~~~~~~~~~~~--p~l~~~~~r~~~r 199 (214)
T PRK15113 153 LAPGQPNL---FGE-WC----IADTD---LALMLNRLVLHGDEVP--ERLADYATFQWQR 199 (214)
T ss_pred HhcCCCEe---eCC-cc----HHHHH---HHHHHHHHHHcCCCCC--HHHHHHHHHHhcC
Confidence 699 996 99 99999 555442 122334342 9999999998753
No 6
>PLN02473 glutathione S-transferase
Probab=99.91 E-value=4.8e-24 Score=193.34 Aligned_cols=184 Identities=15% Similarity=0.142 Sum_probs=129.8
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
.++||+++.||+|+||+++|+|+|++|+.+.+|+. ++++..++++ ++||.|+||+|+|+ |.+|+||.||++||+
T Consensus 2 ~~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~---~~~~~~~~~~-~~nP~g~vP~L~~~--g~~l~ES~aI~~YL~ 75 (214)
T PLN02473 2 VVKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLD---KLEQKKPEHL-LRQPFGQVPAIEDG--DLKLFESRAIARYYA 75 (214)
T ss_pred ceEEecCCCCCchHHHHHHHHHcCCCceEEEecCc---ccccCCHHHH-hhCCCCCCCeEEEC--CEEEEehHHHHHHHH
Confidence 47999999999999999999999999999988863 4556778888 89999999999985 889999999999999
Q ss_pred hhcCCC--CCCCCCHHHHHHHHhhhhHHHhhccch---hhhhh-cC--CCCCcchhhhhccCCChHHHHHHHHHHHhcc-
Q 019273 214 QQYGKG--RSPSTGLLESTLITGWMPTIFRAGRGM---TLWEK-AR--PDPPSKKLELFSYENNPYARIVREALCELEL- 284 (343)
Q Consensus 214 ~~y~~~--~~~p~~~~era~v~~Wl~~~~~~~~g~---~~~~~-~~--~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~- 284 (343)
++|++. .+.|.++.+|+++.+|+.+....+... ..+.. .. ...+... .. .......+.+.|..||.
T Consensus 76 ~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~l~~le~~ 150 (214)
T PLN02473 76 TKYADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDV-AL----VEELKVKFDKVLDVYENR 150 (214)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCCh-HH----HHHHHHHHHHHHHHHHHH
Confidence 999753 355778889999999998765544321 00000 00 0000000 00 00011234555555543
Q ss_pred ----CcccccccccCCccchhHhhhCCCeEeEEE--cC--CCCCCCCChHHHHHHHHHHhcC
Q 019273 285 ----PYILQNVGDGSSRTKLLVDITGSKEVPYLI--DP--NTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 ----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~--~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|+ +||++| +||++ .++.+. .. .....+.++|+|.+|++++.++
T Consensus 151 L~~~~~l---~Gd~~t----~ADi~---~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~ 202 (214)
T PLN02473 151 LATNRYL---GGDEFT----LADLT---HMPGMRYIMNETSLSGLVTSRENLNRWWNEISAR 202 (214)
T ss_pred hccCCcc---cCCCCC----HHHHH---HHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcC
Confidence 899 999999 99998 444431 11 1111257899999999999764
No 7
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.1e-23 Score=182.75 Aligned_cols=176 Identities=18% Similarity=0.242 Sum_probs=135.4
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
..+||++..|.+++|||++|..+||+||.+.|++.. .+++...+|. ++||.+|||+|+++ |.+|+||.||++||+
T Consensus 5 KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk--~~~q~~~ef~-~iNPm~kVP~L~i~--g~tl~eS~AII~YLe 79 (217)
T KOG0868|consen 5 KPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLK--EEDQSDSEFK-EINPMEKVPTLVID--GLTLTESLAIIEYLE 79 (217)
T ss_pred cchhhhhhcccchHHHHHHHHHcCCCcceeehhhhc--chhhhhhHHh-hcCchhhCCeEEEC--CEEeehHHHHHHHHH
Confidence 467999988889999999999999999999999852 2244455665 99999999999995 999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhcc---C----CChHHH-HHHHHHHHhcc-
Q 019273 214 QQYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSY---E----NNPYAR-IVREALCELEL- 284 (343)
Q Consensus 214 ~~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~---~----~~p~~~-~Vr~~L~~Le~- 284 (343)
++|+++.++|.|+..|+...+-...+...+ .|.+.+.++.+ + +..++. .+.+.|..||.
T Consensus 80 Et~P~ppLLP~d~~KRA~~r~i~~~i~sgI------------QPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEkl 147 (217)
T KOG0868|consen 80 ETYPDPPLLPKDPHKRAKARAISLLIASGI------------QPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKL 147 (217)
T ss_pred hcCCCCCCCCcCHHHHHHHHHHHHHHHhCC------------CcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHH
Confidence 999999888999999998887665543322 23333332211 0 123332 24455555543
Q ss_pred ------CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHh
Q 019273 285 ------PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 285 ------pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~ 336 (343)
.|. +||++| +||++ +.|.+. +..+.++|..||.|.+.-++..
T Consensus 148 L~~~aGkyc---vGDevt----iADl~---L~pqv~nA~rf~vdl~PYPti~ri~e~l~ 196 (217)
T KOG0868|consen 148 LKSHAGKYC---VGDEVT----IADLC---LPPQVYNANRFHVDLTPYPTITRINEELA 196 (217)
T ss_pred HHHccCCcc---cCceee----hhhhc---cchhhhhhhhccccCCcCchHHHHHHHHH
Confidence 999 999999 99999 777766 6678899999999998877653
No 8
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.90 E-value=2.7e-23 Score=186.27 Aligned_cols=181 Identities=14% Similarity=0.141 Sum_probs=127.4
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
|+||+... +++++|+++|+++||+|+.+.|++.. +.....+++. ++||.|+||+|+++ +|.+|+||.+|++||++
T Consensus 1 m~l~~~~~-s~~~~~~~~L~~~gi~~e~~~v~~~~--~~~~~~~~~~-~~nP~g~vPvL~~~-~g~~l~eS~aI~~YL~~ 75 (201)
T PRK10542 1 MKLFYKPG-ACSLASHITLRESGLDFTLVSVDLAK--KRLENGDDYL-AINPKGQVPALLLD-DGTLLTEGVAIMQYLAD 75 (201)
T ss_pred Cceeeccc-HHHHHHHHHHHHcCCCceEEEeeccc--ccccCChHHH-HhCcCCCCCeEEeC-CCcEeecHHHHHHHHHH
Confidence 57999885 47999999999999999999888632 1123456777 99999999999853 58899999999999999
Q ss_pred hcCCCC-CCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc-----Cccc
Q 019273 215 QYGKGR-SPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELEL-----PYIL 288 (343)
Q Consensus 215 ~y~~~~-~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~-----pyL~ 288 (343)
+|++.. .+|.++.+|+++.+|+.+....+.... ..... +...-.. .......+.+.|..+|. +|+
T Consensus 76 ~~~~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~----~~~~~~~~~~~l~~le~~L~~~~~l- 146 (201)
T PRK10542 76 SVPDRQLLAPVGSLSRYHTIEWLNYIATELHKGF--TPLFR--PDTPEEY----KPTVRAQLEKKFQYVDEALADEQWI- 146 (201)
T ss_pred hCcccccCCCCCcHHHHHHHHHHHHHHhhhhhhh--hhccC--CCChHHH----HHHHHHHHHHHHHHHHHHhcCCCee-
Confidence 998754 346678889999999987655443210 00000 0000000 00112235555555543 899
Q ss_pred ccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 289 QNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 289 ~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|+++| +|||+ +++++. ....+.++..+|+|.+|++++..+
T Consensus 147 --~G~~~s----~ADi~---l~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 188 (201)
T PRK10542 147 --CGQRFT----IADAY---LFTVLRWAYAVKLNLEGLEHIAAYMQRVAER 188 (201)
T ss_pred --eCCCCc----HHhHH---HHHHHHHhhccCCCcccchHHHHHHHHHHcC
Confidence 999999 99999 555543 233455567899999999998764
No 9
>PLN02395 glutathione S-transferase
Probab=99.89 E-value=6.2e-23 Score=186.01 Aligned_cols=182 Identities=17% Similarity=0.222 Sum_probs=127.8
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
.++||+.+.| +++||+++|+|+|++|+.+.+++. .++.+.++++ ++||.|+||+|+|+ |.+|+||.+|++||+
T Consensus 2 ~~~ly~~~~~-~~~rv~~~L~e~gl~~e~~~v~~~---~~~~~~~~~~-~~nP~g~vP~L~~~--~~~l~ES~aI~~YL~ 74 (215)
T PLN02395 2 VLKVYGPAFA-SPKRALVTLIEKGVEFETVPVDLM---KGEHKQPEYL-ALQPFGVVPVIVDG--DYKIFESRAIMRYYA 74 (215)
T ss_pred eEEEEcCCcC-cHHHHHHHHHHcCCCceEEEeccc---cCCcCCHHHH-hhCCCCCCCEEEEC--CEEEEcHHHHHHHHH
Confidence 4799997754 689999999999999999988863 3456667777 89999999999985 789999999999999
Q ss_pred hhcCCC--CCCCCCHHHHHHHHhhhhHHHhhccch-h--h----hhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc
Q 019273 214 QQYGKG--RSPSTGLLESTLITGWMPTIFRAGRGM-T--L----WEKARPDPPSKKLELFSYENNPYARIVREALCELEL 284 (343)
Q Consensus 214 ~~y~~~--~~~p~~~~era~v~~Wl~~~~~~~~g~-~--~----~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~ 284 (343)
++|+.. .+.|.++.+++++++|+.+....++.. . . +.. ....+... .. .......+.+.|..||.
T Consensus 75 ~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~----~~~~~~~~~~~l~~le~ 148 (215)
T PLN02395 75 EKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFAS-KMGFPADE-KV----IKESEEKLAKVLDVYEA 148 (215)
T ss_pred HHcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhh-hccCCCcH-HH----HHHHHHHHHHHHHHHHH
Confidence 999752 356778889999999998765544311 0 0 100 00000000 00 00112235555555553
Q ss_pred -----CcccccccccCCccchhHhhhCCCeEeEEE--cCCCC--CCCCChHHHHHHHHHHhcC
Q 019273 285 -----PYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTS--TQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 -----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g--~~l~e~p~I~awl~r~~~~ 338 (343)
+|+ +|+++| +||++ +++++. ....+ ..+.++|+|.+|++++.++
T Consensus 149 ~L~~~~~l---~G~~~s----~ADi~---l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~r 201 (215)
T PLN02395 149 RLSKSKYL---AGDFVS----LADLA---HLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSR 201 (215)
T ss_pred HhcCCccc---cCCCcC----HHHHH---HHHHHHHHhcccchhhhhccCchHHHHHHHHHcC
Confidence 899 999999 99999 566542 11111 2367899999999999764
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.87 E-value=3.3e-22 Score=180.46 Aligned_cols=182 Identities=17% Similarity=0.221 Sum_probs=127.3
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhh
Q 019273 136 QLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQ 215 (343)
Q Consensus 136 ~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~ 215 (343)
+||++..||+|++||++|+++||+|+.+.++.. ..+++..+++. ++||+++||+|+|+ |.+|+||.+|++||+++
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~--~~~~~~~~~~~-~~nP~g~vP~L~~~--g~~l~ES~aI~~yl~~~ 75 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLL--RDGEQRSPEFL-ALNPQGLVPTLDID--GEVLTQSLAIIEYLEET 75 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccc--cccccCChhhh-hcCCCCcCCEEEEC--CEEeecHHHHHHHHHHh
Confidence 489888899999999999999999998877642 11244456666 89999999999984 89999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHhhhhHHHhhccch-----hhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc------
Q 019273 216 YGKGRSPSTGLLESTLITGWMPTIFRAGRGM-----TLWEKARPDPPSKKLELFSYENNPYARIVREALCELEL------ 284 (343)
Q Consensus 216 y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~-----~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~------ 284 (343)
|++..+.|.++.+++.+.+|+.+....++.+ ..+............ ..-..+.+.+.|..||.
T Consensus 76 ~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~le~~L~~~~ 149 (210)
T TIGR01262 76 YPDPPLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEAR------NRWYQHWISKGFAALEALLQPHA 149 (210)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHH------HHHHHHHHHHHHHHHHHHHhcCC
Confidence 9876566778889999999988765433311 000000000000000 00011224455555543
Q ss_pred -CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 285 -PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 -pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|+ +|+++| +|||+ +++++. ....+..+.+||+|.+|++++.++
T Consensus 150 ~~~l---~G~~~T----~ADi~---~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~r 195 (210)
T TIGR01262 150 GAFC---VGDTPT----LADLC---LVPQVYNAERFGVDLTPYPTLRRIAAALAAL 195 (210)
T ss_pred CCEe---eCCCCC----HHHHH---HHHHHHHHHHcCCCcccchHHHHHHHHHhcC
Confidence 599 999999 99999 555543 222344568899999999998764
No 11
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=5.1e-22 Score=183.13 Aligned_cols=184 Identities=26% Similarity=0.344 Sum_probs=137.5
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
.++||+++.+|.|++|.++++++|++|+.+.||+ .+++++.++|+ ++||.++||+|+|+ |..++||.||+.||+
T Consensus 2 ~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~---~~ge~~~pefl-~~nP~~kVP~l~d~--~~~l~eS~AI~~Yl~ 75 (226)
T KOG0867|consen 2 KLKLYGHLGSPPARAVLIAAKELGLEVELKPVDL---VKGEQKSPEFL-KLNPLGKVPALEDG--GLTLWESHAILRYLA 75 (226)
T ss_pred CceEeecCCCcchHHHHHHHHHcCCceeEEEeec---cccccCCHHHH-hcCcCCCCCeEecC--CeEEeeHHHHHHHHH
Confidence 4789999999999999999999999999998887 36889999999 99999999999996 999999999999999
Q ss_pred hhcC-CCC-CCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhh-ccC---CChHHHHHHHHHHHhcc---
Q 019273 214 QQYG-KGR-SPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELF-SYE---NNPYARIVREALCELEL--- 284 (343)
Q Consensus 214 ~~y~-~~~-~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~-~~~---~~p~~~~Vr~~L~~Le~--- 284 (343)
++|. .+. ++|.++.+|+.+++|+++....+.....+. ....++.+. .+. .......++..+..+|.
T Consensus 76 ~ky~~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~-----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~ 150 (226)
T KOG0867|consen 76 EKYGPLGGILLPKDLKERAIVDQWLEFENGVLDPVTFER-----PILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLK 150 (226)
T ss_pred HHcCCCCcccCCcCHHHHHHHHHHHHhhhcccccccccc-----eeeecceecccCcchhhHHHHHHHHHHHHHHHHHHc
Confidence 9997 333 678899999999999987665544221100 000110000 000 01123357777777765
Q ss_pred --CcccccccccCCccchhHhhhCCCeEeEEEc---CC-CCCCCCChHHHHHHHHHHhcC
Q 019273 285 --PYILQNVGDGSSRTKLLVDITGSKEVPYLID---PN-TSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 --pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~---~~-~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|+ +|+++| +||+. +++.+.. .. ......++|++.+|++++...
T Consensus 151 ~~~yl---~g~~~t----lADl~---~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~ 200 (226)
T KOG0867|consen 151 TQVYL---AGDQLT----LADLS---LASTLSQFQGKFATEKDFEKYPKVARWYERIQKR 200 (226)
T ss_pred cCCcc---cCCccc----HHHHH---HhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhC
Confidence 999 999999 99999 4443221 11 134578999999999998754
No 12
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.86 E-value=9.5e-22 Score=176.75 Aligned_cols=182 Identities=13% Similarity=0.111 Sum_probs=122.2
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||++..||++++|+++|+++|++|+.+.++.. .+ ..++. ++||.|+||+|+++ +|.+|+||.+|++||++
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~---~~---~~~~~-~~nP~g~vP~L~~~-~g~~l~eS~aI~~yL~~ 72 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPY---NA---DNGVA-QYNPLGKVPALVTE-EGECWFDSPIIAEYIEL 72 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCC---CC---chhhh-hcCCccCCCeEEeC-CCCeeecHHHHHHHHHH
Confidence 5899999999999999999999999998776642 12 23444 78999999999843 48899999999999999
Q ss_pred hcCCCCCCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc-----Ccccc
Q 019273 215 QYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELEL-----PYILQ 289 (343)
Q Consensus 215 ~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~-----pyL~~ 289 (343)
+|++..+.|.++.+++++++|+.+....+............+....... . .......+++.|..||. + +
T Consensus 73 ~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~l~~~l~~le~~L~~~~-l-- 146 (202)
T PRK10357 73 LNVAPAMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSED-E--LLRQREKINRSLDALEGYLVDGT-L-- 146 (202)
T ss_pred hCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHH-H--HHHHHHHHHHHHHHHHHhhccCc-c--
Confidence 9876556678888899999997765443321110000000000000000 0 00112245666666654 6 8
Q ss_pred cccccCCccchhHhhhCCCeEeEEE---cCCCCCC-CCChHHHHHHHHHHhcC
Q 019273 290 NVGDGSSRTKLLVDITGSKEVPYLI---DPNTSTQ-IGDYKKILSYLFQSYSA 338 (343)
Q Consensus 290 ~vGd~~T~~~~lADi~g~~~~p~L~---~~~~g~~-l~e~p~I~awl~r~~~~ 338 (343)
+||++| +|||+ +++.+. ....+.. ..++|+|.+|++++.++
T Consensus 147 -~Gd~~t----~ADi~---l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~r 191 (202)
T PRK10357 147 -KTDTVN----LATIA---IACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQR 191 (202)
T ss_pred -cCCCcC----HHHHH---HHHHHHHHHhcccCcchhhcChHHHHHHHHHhcC
Confidence 999999 99999 444332 1111111 36799999999999874
No 13
>PRK10387 glutaredoxin 2; Provisional
Probab=99.86 E-value=1.7e-21 Score=175.76 Aligned_cols=180 Identities=23% Similarity=0.321 Sum_probs=117.9
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
|+||++..||+|+||+++|+++|++|+.+.++. +++.. .. ++||.++||+|+.+ +|.+|+||.||++||++
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~-----~~~~~--~~-~~~p~~~VPvL~~~-~g~~l~eS~aI~~yL~~ 71 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLAN-----DDEAT--PI-RMIGQKQVPILQKD-DGSYMPESLDIVHYIDE 71 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCC-----Cchhh--HH-HhcCCcccceEEec-CCeEecCHHHHHHHHHH
Confidence 589999999999999999999999999876642 22222 24 78999999999532 48999999999999999
Q ss_pred hcCCCCCCCCCHHHHHHHHhhhhHHHhhccch--hhhhhcCCCCC---cchhhhh------ccC-------CC-hHHHHH
Q 019273 215 QYGKGRSPSTGLLESTLITGWMPTIFRAGRGM--TLWEKARPDPP---SKKLELF------SYE-------NN-PYARIV 275 (343)
Q Consensus 215 ~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~--~~~~~~~~~~p---~~~l~l~------~~~-------~~-p~~~~V 275 (343)
+|++..+. + .+++.+.+|+.++...+... ..|.. ...+. ......+ .+. .. .....+
T Consensus 72 ~~~~~~l~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (210)
T PRK10387 72 LDGKPLLT--G-KRSPAIEEWLRKVFGYLNKLLYPRFAK-ADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEI 147 (210)
T ss_pred hCCCccCC--C-cccHHHHHHHHHHHHHhhcchhccccc-CCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHH
Confidence 99875443 1 25678899988765444321 11111 00000 0000000 000 00 112245
Q ss_pred HHHHHHhcc----CcccccccccCCccchhHhhhCCCeEeEEE--cCCCCCCCCChHHHHHHHHHHhcCC
Q 019273 276 REALCELEL----PYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTSTQIGDYKKILSYLFQSYSAS 339 (343)
Q Consensus 276 r~~L~~Le~----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~~l~e~p~I~awl~r~~~~~ 339 (343)
++.|+.||. +|+ +||++| +||++ +++++. ....++ ..+|+|.+|++|+.++.
T Consensus 148 ~~~l~~le~~L~~~~l---~G~~~s----~ADi~---l~~~l~~~~~~~~~--~~~p~l~~w~~r~~~r~ 205 (210)
T PRK10387 148 NADLRALDPLIVKPNA---VNGELS----TDDIH---LFPILRNLTLVKGI--EWPPRVADYRDNMSKKT 205 (210)
T ss_pred HHHHHHHHHHhcCccc---cCCCCC----HHHHH---HHHHHhcceeecCC--CCCHHHHHHHHHHHHHh
Confidence 566665554 999 999999 99999 555543 111233 34699999999997643
No 14
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=6.2e-21 Score=174.32 Aligned_cols=176 Identities=20% Similarity=0.213 Sum_probs=131.1
Q ss_pred CcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhC-CCceeeEEEcCCCCeeecCHHHHHHH
Q 019273 133 TRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLG-GKEQFPFLIDPNTGVSMYESGDIVNY 211 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~n-p~~~VP~Lvd~n~g~~l~ES~aI~~Y 211 (343)
..++||++..|||++||+++|++|||+||.+.+|+. ++. +.+.+.| +.+|||||++. |..+.||..|++|
T Consensus 8 ~~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~------~Ks-~~ll~~np~hkKVPvL~Hn--~k~i~ESliiveY 78 (231)
T KOG0406|consen 8 GTVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLT------NKS-EWLLEKNPVHKKVPVLEHN--GKPICESLIIVEY 78 (231)
T ss_pred CeEEEEEeecChHHHHHHHHHHhcCCceEEEecCCC------CCC-HHHHHhccccccCCEEEEC--CceehhhHHHHHH
Confidence 569999999999999999999999999999988873 244 4445999 79999999994 8889999999999
Q ss_pred HhhhcCC-CCCCCCCHHHHHHHHhhhhHHHhhcc--chhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc----
Q 019273 212 LFQQYGK-GRSPSTGLLESTLITGWMPTIFRAGR--GMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELEL---- 284 (343)
Q Consensus 212 L~~~y~~-~~~~p~~~~era~v~~Wl~~~~~~~~--g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~---- 284 (343)
|++.|++ ...+|.||.+|++..-|+.++...+. +...|..... . +.......+++.|..||.
T Consensus 79 iDe~w~~~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~--e---------~~~~~~~e~~e~l~~lE~el~k 147 (231)
T KOG0406|consen 79 IDETWPSGPPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGG--E---------EQEAAKEELREALKVLEEELGK 147 (231)
T ss_pred HHhhccCCCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCc--h---------HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999995 66779999999999999998875433 1112221000 0 011112235666665553
Q ss_pred --CcccccccccCCccchhHhhhCCCeEeEEE------cCCCC---CCCCChHHHHHHHHHHhcC
Q 019273 285 --PYILQNVGDGSSRTKLLVDITGSKEVPYLI------DPNTS---TQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 --pyL~~~vGd~~T~~~~lADi~g~~~~p~L~------~~~~g---~~l~e~p~I~awl~r~~~~ 338 (343)
+|. .|++++ +.||+ .+|++. ....| ..-.++|.|.+|++++.+.
T Consensus 148 ~k~~f---gG~~~G----~vDi~---~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~ 202 (231)
T KOG0406|consen 148 GKDFF---GGETIG----FVDIA---IGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKED 202 (231)
T ss_pred CCCCC---CCCCcC----Hhhhh---HHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcC
Confidence 888 999999 99999 555433 11122 2246899999999998764
No 15
>PLN02378 glutathione S-transferase DHAR1
Probab=99.83 E-value=1.9e-20 Score=170.64 Aligned_cols=160 Identities=18% Similarity=0.205 Sum_probs=109.9
Q ss_pred eCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhhcCCC
Q 019273 140 FEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQYGKG 219 (343)
Q Consensus 140 ~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~y~~~ 219 (343)
+..||||+||+++|+++|++|+.+.||+. .+.++|+ ++||.|+||+|+|+ |.+|+||.+|++||+++|+..
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~~v~~~------~~~~~~l-~inP~G~VPvL~~~--~~~l~ES~aI~~YL~~~~~~~ 87 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIHLINLS------DKPQWFL-DISPQGKVPVLKID--DKWVTDSDVIVGILEEKYPDP 87 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEEEeCcc------cCCHHHH-HhCCCCCCCEEEEC--CEEecCHHHHHHHHHHhCCCC
Confidence 34599999999999999999999998863 2345777 99999999999985 789999999999999999864
Q ss_pred CCCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHH----hc---cCccccccc
Q 019273 220 RSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCE----LE---LPYILQNVG 292 (343)
Q Consensus 220 ~~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~----Le---~pyL~~~vG 292 (343)
.+ .++.+++.+.+++..... .+.. .. ... ......+.+.|.. |+ .+|+ +|
T Consensus 88 ~l--~~~~~~a~i~~~~~~~~~------~~~~-~~-~~~----------~~~~~~~~~~l~~le~~L~~~~~~fl---~G 144 (213)
T PLN02378 88 PL--KTPAEFASVGSNIFGTFG------TFLK-SK-DSN----------DGSEHALLVELEALENHLKSHDGPFI---AG 144 (213)
T ss_pred CC--CCHHHHHHHHHHHHHHHH------HHHh-cC-Chh----------hHHHHHHHHHHHHHHHHHhcCCCCCc---CC
Confidence 32 356778877776543211 0101 00 000 0011122233333 32 3899 99
Q ss_pred ccCCccchhHhhhCCCeEeEEE---c--C-CCCCC-CCChHHHHHHHHHHhcC
Q 019273 293 DGSSRTKLLVDITGSKEVPYLI---D--P-NTSTQ-IGDYKKILSYLFQSYSA 338 (343)
Q Consensus 293 d~~T~~~~lADi~g~~~~p~L~---~--~-~~g~~-l~e~p~I~awl~r~~~~ 338 (343)
|++| +||++ .+|++. . . ..+.. ..++|+|.+|++++.++
T Consensus 145 d~~T----~ADi~---l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~r 190 (213)
T PLN02378 145 ERVS----AVDLS---LAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSL 190 (213)
T ss_pred CCCc----hhhHH---HHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcC
Confidence 9999 99999 666532 0 1 11222 36799999999999864
No 16
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.82 E-value=6.7e-20 Score=169.93 Aligned_cols=171 Identities=15% Similarity=0.146 Sum_probs=111.4
Q ss_pred eCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhhcCCC
Q 019273 140 FEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQYGKG 219 (343)
Q Consensus 140 ~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~y~~~ 219 (343)
...||+|+||+++|.++||+|+.+.||+. .+.++|+ ++||.|+||+|+|+ |.+|+||.+|++||+++|+++
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~------~~~~~fl-~inP~g~vPvL~~~--g~~l~ES~aI~eYL~e~~~~~ 86 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLK------RKPEDLQ-NLAPGTHPPFLTYN--TEVKTDVNKIEEFLEETLCPP 86 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCC------CCCHHHH-HHCcCCCCCEEEEC--CEEeecHHHHHHHHHHHcCCC
Confidence 45799999999999999999999999863 2356777 99999999999984 899999999999999999763
Q ss_pred C---CCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHh--------------
Q 019273 220 R---SPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCEL-------------- 282 (343)
Q Consensus 220 ~---~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~L-------------- 282 (343)
. ..+.++..++....+..... .+.... .+........ +.......++..|..+
T Consensus 87 ~~p~l~p~~~~~~~~~~~l~~~~~-------~~~~~~--~~~~~~~~~~-~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~ 156 (236)
T TIGR00862 87 RYPKLSPKHPESNTAGLDIFAKFS-------AYIKNS--NPEANDNLEK-GLLKALKKLDDYLNSPLPEEIDEDSAEDEK 156 (236)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHH-------HHHHcC--CHHHHHHHHH-HHHHHHHHHHHHHhcccccccccccccccc
Confidence 2 33445544443222222111 111101 0100000000 0000011233333321
Q ss_pred --ccCcccccccccCCccchhHhhhCCCeEeEEE-c-----CCCCCC-CCChHHHHHHHHHHhcCC
Q 019273 283 --ELPYILQNVGDGSSRTKLLVDITGSKEVPYLI-D-----PNTSTQ-IGDYKKILSYLFQSYSAS 339 (343)
Q Consensus 283 --e~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~-----~~~g~~-l~e~p~I~awl~r~~~~~ 339 (343)
+.+|+ +||++| +|||+ ++|++. . ...|++ ..++|+|.+|+++++++.
T Consensus 157 ~~~~~f~---~Gd~~t----laD~~---l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~ 212 (236)
T TIGR00862 157 VSRRKFL---DGDELT----LADCN---LLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYARE 212 (236)
T ss_pred ccCCCcc---cCCccc----hhhHH---HHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccc
Confidence 24899 999999 99999 777764 1 123666 589999999999998753
No 17
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.81 E-value=2e-19 Score=169.65 Aligned_cols=158 Identities=18% Similarity=0.262 Sum_probs=110.8
Q ss_pred CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhhcCCCCC
Q 019273 142 ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQYGKGRS 221 (343)
Q Consensus 142 ~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~y~~~~~ 221 (343)
.||||+||+++|+|+||+|+.+.||+. .+.++++ ++||.|+||+|+++ |.+|+||.+|++||+++|+...+
T Consensus 72 ~cp~s~rV~i~L~ekgi~ye~~~vdl~------~~~~~fl-~iNP~GkVPvL~~d--~~~L~ES~aI~~YL~e~~p~~~L 142 (265)
T PLN02817 72 DCPFCQRVLLTLEEKHLPYDMKLVDLT------NKPEWFL-KISPEGKVPVVKLD--EKWVADSDVITQALEEKYPDPPL 142 (265)
T ss_pred CCcHHHHHHHHHHHcCCCCEEEEeCcC------cCCHHHH-hhCCCCCCCEEEEC--CEEEecHHHHHHHHHHHCCCCCC
Confidence 499999999999999999999988862 2345676 99999999999985 67899999999999999987543
Q ss_pred CCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhc------cCcccccccccC
Q 019273 222 PSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELE------LPYILQNVGDGS 295 (343)
Q Consensus 222 ~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le------~pyL~~~vGd~~ 295 (343)
.++.+++.+.+|+..... . +.. .. .+.. .....+.+.|..|| .+|+ +|+++
T Consensus 143 --~~~~era~i~~~l~~~~~---~---~~~-~~-~~~~----------~~~~~l~~~l~~LE~~L~~~g~yl---~Gd~~ 199 (265)
T PLN02817 143 --ATPPEKASVGSKIFSTFI---G---FLK-SK-DPGD----------GTEQALLDELTSFDDYIKENGPFI---NGEKI 199 (265)
T ss_pred --CCHHHHHHHHHHHHHHHH---H---Hhc-cC-Ccch----------HHHHHHHHHHHHHHHHHhcCCCee---CCCCC
Confidence 356788999888753211 1 100 00 0100 00111223333332 3899 99999
Q ss_pred CccchhHhhhCCCeEeEEE--c----CCCCCC-CCChHHHHHHHHHHhcC
Q 019273 296 SRTKLLVDITGSKEVPYLI--D----PNTSTQ-IGDYKKILSYLFQSYSA 338 (343)
Q Consensus 296 T~~~~lADi~g~~~~p~L~--~----~~~g~~-l~e~p~I~awl~r~~~~ 338 (343)
| +|||+ ++|++. . ...+.+ ..++|+|.+|++++..+
T Consensus 200 S----lADi~---l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~r 242 (265)
T PLN02817 200 S----AADLS---LGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSM 242 (265)
T ss_pred C----HHHHH---HHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcc
Confidence 9 99999 666542 1 111233 36899999999999764
No 18
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.80 E-value=4.6e-19 Score=161.16 Aligned_cols=177 Identities=24% Similarity=0.313 Sum_probs=113.2
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhh
Q 019273 136 QLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQ 215 (343)
Q Consensus 136 ~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~ 215 (343)
+||.+..||||+|||++|+++|++|+.+.++ .+++. ..+ ++||.++||+|+++ +|.+|+||.+|++||+++
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~-----~~~~~--~~~-~~np~g~vP~l~~~-~g~~l~es~~I~~yL~~~ 71 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLL-----NDDEE--TPI-RMIGAKQVPILQKD-DGRAMPESLDIVAYFDKL 71 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECC-----CCcch--hHH-HhcCCCCcceEEee-CCeEeccHHHHHHHHHHh
Confidence 5899999999999999999999999975443 23322 234 89999999999832 488999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHhhhhHHHhhccch--hhhhhcCCCCCcc----hhhhh------ccC--------CChHHHHH
Q 019273 216 YGKGRSPSTGLLESTLITGWMPTIFRAGRGM--TLWEKARPDPPSK----KLELF------SYE--------NNPYARIV 275 (343)
Q Consensus 216 y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~--~~~~~~~~~~p~~----~l~l~------~~~--------~~p~~~~V 275 (343)
|+.+...+ .+++++.+|+.++...+... ..|.. ...+.. ..+.+ ... .......+
T Consensus 72 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 146 (209)
T TIGR02182 72 DGEPLLTG---KVSPEIEAWLRKVTGYANKLLLPRFAK--SDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEI 146 (209)
T ss_pred CCCccCCC---CChHHHHHHHHHHHHHhhhhhcccccc--CCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHH
Confidence 97643322 24567888887755544321 11111 000000 00000 000 01122346
Q ss_pred HHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE-cCC-CCCCCCChH-HHHHHHHHHhcCCC
Q 019273 276 REALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPN-TSTQIGDYK-KILSYLFQSYSASP 340 (343)
Q Consensus 276 r~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~-~g~~l~e~p-~I~awl~r~~~~~~ 340 (343)
++.|+.+|. +|+ .| ++| +|||+ .++++. ... .+. ++| +|.+|++|+.++..
T Consensus 147 ~~~l~~le~~L~~~~~l---~g-~~T----iADi~---l~~~l~~~~~~~~~---~~p~~l~~w~~Ri~ar~~ 205 (209)
T TIGR02182 147 NADLEELDKLIDGPNAV---NG-ELS----EDDIL---VFPLLRNLTLVAGI---NWPSRVADYLDNMSKKSK 205 (209)
T ss_pred HHHHHHHHHHHhCcccc---CC-CCC----HHHHH---HHHHhcCeeeecCC---CCChHHHHHHHHHHHHhC
Confidence 666666654 898 76 599 99999 555443 111 122 356 99999999986543
No 19
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.77 E-value=1.1e-18 Score=134.09 Aligned_cols=77 Identities=55% Similarity=0.954 Sum_probs=66.2
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
|++||+++.||||+||+++|+++||+|+.+.++ ++++..+++. ++||.++||+|+|+++|..++||.+|++||+
T Consensus 1 ~~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~-----~~~~~~~~~~-~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~ 74 (77)
T cd03041 1 PLELYEFEGSPFCRLVREVLTELELDVILYPCP-----KGSPKRDKFL-EKGGKVQVPYLVDPNTGVQMFESADIVKYLF 74 (77)
T ss_pred CceEecCCCCchHHHHHHHHHHcCCcEEEEECC-----CChHHHHHHH-HhCCCCcccEEEeCCCCeEEEcHHHHHHHHH
Confidence 589999999999999999999999999976543 3444556766 8999999999998645789999999999999
Q ss_pred hhc
Q 019273 214 QQY 216 (343)
Q Consensus 214 ~~y 216 (343)
++|
T Consensus 75 ~~~ 77 (77)
T cd03041 75 KTY 77 (77)
T ss_pred HhC
Confidence 875
No 20
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.74 E-value=8.2e-18 Score=152.24 Aligned_cols=170 Identities=14% Similarity=0.072 Sum_probs=107.4
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHH-----H--hhCCCceeeEEEcCCCCeeecCHH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMV-----R--RLGGKEQFPFLIDPNTGVSMYESG 206 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l-----~--~~np~~~VP~Lvd~n~g~~l~ES~ 206 (343)
.++||+++.++++++||++|+++|++|+.+.++ ++. .+++ . ++||.|+||+|+|+ |.+|+||.
T Consensus 4 ~~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~-------~~~-~~~~~~~~~~~~~~nP~g~vP~L~~~--~~~l~eS~ 73 (205)
T PTZ00057 4 EIVLYYFDARGKAELIRLIFAYLGIEYTDKRFG-------ENG-DAFIEFKNFKKEKDTPFEQVPILEMD--NIIFAQSQ 73 (205)
T ss_pred ceEEEecCCCcchHHHHHHHHHcCCCeEEEecc-------ccc-hHHHHHHhccccCCCCCCCCCEEEEC--CEEEecHH
Confidence 489999999999999999999999999976442 111 1332 1 47999999999995 78999999
Q ss_pred HHHHHHhhhcCCCCCCCCCHHHHHHHHhhhhHHH-hhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhc--
Q 019273 207 DIVNYLFQQYGKGRSPSTGLLESTLITGWMPTIF-RAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELE-- 283 (343)
Q Consensus 207 aI~~YL~~~y~~~~~~p~~~~era~v~~Wl~~~~-~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le-- 283 (343)
||++||+++|+.. +.+ +++++..|+.+.. ..++. ....... ........ ....+.+.|..||
T Consensus 74 AI~~YLa~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~-------~~~~~~~~l~~le~~ 138 (205)
T PTZ00057 74 AIVRYLSKKYKIC---GES--ELNEFYADMIFCGVQDIHY--KFNNTNL-FKQNETTF-------LNEELPKWSGYFENI 138 (205)
T ss_pred HHHHHHHHHcCCC---CCC--HHHHHHHHHHHHHHHHHHH--HHhhhHH-HHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 9999999999742 223 2344444543321 11110 0000000 00000000 0112333333332
Q ss_pred -----cCcccccccccCCccchhHhhhCCCeEeEEE--cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 284 -----LPYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 284 -----~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
.+|+ +||++| +||++ +++++. ....+.++..||+|.+|.+|+.+.
T Consensus 139 L~~~~~~~l---~Gd~~T----~AD~~---l~~~~~~~~~~~~~~l~~~P~l~~~~~r~~~~ 190 (205)
T PTZ00057 139 LKKNHCNYF---VGDNLT----YADLA---VFNLYDDIETKYPNSLKNFPLLKAHNEFISNL 190 (205)
T ss_pred HHhCCCCee---eCCccc----HHHHH---HHHHHHHHHHhChhhhccChhHHHHHHHHHhC
Confidence 2799 999999 99999 555443 112355678999999999998653
No 21
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.71 E-value=2.5e-17 Score=125.59 Aligned_cols=73 Identities=23% Similarity=0.316 Sum_probs=64.9
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
++||+++.||+|+||+++|+|+|++|+.+.+++ .+++++.+++. ++||.++||+|+|+ |.+|+||.||++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~---~~~~~~~~~~~-~inP~g~vP~L~~~--g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSL---PLSEHNEPWFM-RLNPTGEVPVLIHG--DNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecC---CcCccCCHHHH-HhCcCCCCCEEEEC--CEEEEcHHHHHHHhC
Confidence 479999999999999999999999999998875 34556667777 99999999999984 899999999999995
No 22
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=5.2e-17 Score=149.94 Aligned_cols=212 Identities=20% Similarity=0.194 Sum_probs=147.3
Q ss_pred hhhhcccCCCCCCcccccCCCCccccC---------CCCCCCcEEEEEeCCChhHHHHHHHHHHcCCCeEE--EEeeeec
Q 019273 101 TSSLSTLARLPWGSRSLSEGSDTQEIS---------NSDSPTRLQLFEFEACPFCRRVREAITELDLSVEW--MYEQVFP 169 (343)
Q Consensus 101 ~~~la~~~r~~~G~~~~~~~~~~~~~~---------~~~~~~~l~LY~~~~~P~~~rvr~~L~elgl~ye~--~~vdl~~ 169 (343)
++...+ +...|.+.|..+++++++. .+....++.||..-.|||++|+.++-++|||+-.+ ..|+-..
T Consensus 11 ~~~~d~--~~~~G~F~R~~s~fR~~i~~d~~~g~~~f~~e~GRYhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m 88 (324)
T COG0435 11 DSWYDT--KSTDGEFKRSSSQFRNWITADGPPGTGGFKAEKGRYHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLM 88 (324)
T ss_pred hhcccc--ccCCCcEEeccchhhceeecCCCCCcCCcCCCCCeEEEEEEecCchHHHHHHHHHHhcccccceEEEecccc
Confidence 455555 6677889999999887662 33455789999999999999999999999996432 2222111
Q ss_pred CCCCCc------------------ccHHHH---HhhCCCceeeEEEcCCCCee-ecCHHHHHHHHhhhcCC--CCCCCCC
Q 019273 170 CPKGSI------------------RHREMV---RRLGGKEQFPFLIDPNTGVS-MYESGDIVNYLFQQYGK--GRSPSTG 225 (343)
Q Consensus 170 ~~~~~~------------------~~~~~l---~~~np~~~VP~Lvd~n~g~~-l~ES~aI~~YL~~~y~~--~~~~p~~ 225 (343)
..+|.. ..+-+. ...+++.+||||+|..+.++ -+||.+|++.|+..|.+ .......
T Consensus 89 ~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dly 168 (324)
T COG0435 89 DENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLY 168 (324)
T ss_pred cCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccC
Confidence 112211 111122 12467889999999866654 89999999999977754 1233334
Q ss_pred HHH-HHHHHhhhhHHHhhcc-chhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHh---cc-----CcccccccccC
Q 019273 226 LLE-STLITGWMPTIFRAGR-GMTLWEKARPDPPSKKLELFSYENNPYARIVREALCEL---EL-----PYILQNVGDGS 295 (343)
Q Consensus 226 ~~e-ra~v~~Wl~~~~~~~~-g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~L---e~-----pyL~~~vGd~~ 295 (343)
|.+ |.+++.|...+...++ |+++.+++.. ...|.+.++++++.| |. .|+ +||++
T Consensus 169 P~~Lr~eId~~n~~Iy~~vNNGVYk~GFA~t-------------q~aYeea~~~lF~~Ld~lE~~L~~~ryl---~Gd~l 232 (324)
T COG0435 169 PEALRTEIDELNKWIYDTVNNGVYKAGFATT-------------QEAYEEAVKKLFEALDKLEQILSERRYL---TGDQL 232 (324)
T ss_pred CHHHHHHHHHHHhhhcccccCceeeecccch-------------HHHHHHHHHHHHHHHHHHHHHhhcCeee---ccccc
Confidence 555 8899999998888887 7777665433 223444455544444 32 899 99999
Q ss_pred CccchhHhhhCCCeEeEEE--c----CCCCCC---CCChHHHHHHHHHHhc
Q 019273 296 SRTKLLVDITGSKEVPYLI--D----PNTSTQ---IGDYKKILSYLFQSYS 337 (343)
Q Consensus 296 T~~~~lADi~g~~~~p~L~--~----~~~g~~---l~e~p~I~awl~r~~~ 337 (343)
| -||+. +++.|+ | ..+.+. +.+||+|..|+..+|.
T Consensus 233 T----EAD~R---LftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq 276 (324)
T COG0435 233 T----EADIR---LFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQ 276 (324)
T ss_pred h----Hhhhh---hhheeEeecceEEeeeecccchhhcCchHHHHHHHHhc
Confidence 9 99999 888776 3 334454 5789999999999997
No 23
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.70 E-value=5.7e-17 Score=122.69 Aligned_cols=74 Identities=27% Similarity=0.486 Sum_probs=65.5
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+++.||+|++++++|+++|++|+.+.+++. ++++..+++. ++||.++||+|+++ |.+|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~---~~~~~~~~~~-~~~p~~~vP~l~~~--~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLM---KGEHLKPEFL-KLNPQHTVPTLVDN--GFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCc---cCCcCCHHHH-hhCcCCCCCEEEEC--CEEEEcHHHHHHHHhC
Confidence 5899999999999999999999999999888762 3455667777 89999999999985 7899999999999975
No 24
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.69 E-value=9.9e-17 Score=123.93 Aligned_cols=80 Identities=28% Similarity=0.478 Sum_probs=68.8
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCC-CCeeecCHHHHHHHH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPN-TGVSMYESGDIVNYL 212 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n-~g~~l~ES~aI~~YL 212 (343)
|++||+++. |+|++|+++|+++|++|+.+.+++. ++++..+++. ++||.++||+|+|++ +|..|+||.||++||
T Consensus 1 ~~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~---~~~~~~~~~~-~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL 75 (81)
T cd03048 1 MITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDIS---KGEQKKPEFL-KINPNGRIPAIVDHNGTPLTVFESGAILLYL 75 (81)
T ss_pred CeEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCc---CCcccCHHHH-HhCcCCCCCEEEeCCCCceEEEcHHHHHHHH
Confidence 589999995 9999999999999999999888752 3455667777 899999999999852 278999999999999
Q ss_pred hhhcCC
Q 019273 213 FQQYGK 218 (343)
Q Consensus 213 ~~~y~~ 218 (343)
+++|+.
T Consensus 76 ~~~~~~ 81 (81)
T cd03048 76 AEKYDK 81 (81)
T ss_pred HHHhCC
Confidence 999863
No 25
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.68 E-value=1.4e-16 Score=121.64 Aligned_cols=74 Identities=27% Similarity=0.504 Sum_probs=65.0
Q ss_pred EEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhhc
Q 019273 137 LFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQY 216 (343)
Q Consensus 137 LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~y 216 (343)
||+++.||||+|||++|+++||+|+.+.++. + ....++. ++||.++||+|+++ |.+++||.+|++||+++|
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~-----~-~~~~~~~-~~~p~~~vPvL~~~--g~~l~dS~~I~~yL~~~~ 71 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDP-----E-EKRPEFL-KLNPKGKVPVLVDD--GEVLTDSAAIIEYLEERY 71 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBT-----T-STSHHHH-HHSTTSBSSEEEET--TEEEESHHHHHHHHHHHS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCc-----c-cchhHHH-hhcccccceEEEEC--CEEEeCHHHHHHHHHHHc
Confidence 8999999999999999999999999887763 1 2345655 99999999999974 899999999999999999
Q ss_pred CCC
Q 019273 217 GKG 219 (343)
Q Consensus 217 ~~~ 219 (343)
++.
T Consensus 72 ~~~ 74 (75)
T PF13417_consen 72 PGP 74 (75)
T ss_dssp TSS
T ss_pred CCC
Confidence 863
No 26
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.67 E-value=2.1e-16 Score=119.06 Aligned_cols=73 Identities=25% Similarity=0.372 Sum_probs=64.1
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
|+||+.+.||+|++++++|+++|++|+.+.++. .+..+++. ++||.++||+|+++ |..++||.+|++||++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~------~~~~~~~~-~~~p~~~vP~l~~~--~~~l~es~aI~~yL~~ 71 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDP------DNPPEDLA-ELNPYGTVPTLVDR--DLVLYESRIIMEYLDE 71 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCC------CCCCHHHH-hhCCCCCCCEEEEC--CEEEEcHHHHHHHHHh
Confidence 589999999999999999999999999887764 13445666 89999999999985 7899999999999998
Q ss_pred hc
Q 019273 215 QY 216 (343)
Q Consensus 215 ~y 216 (343)
+|
T Consensus 72 ~~ 73 (73)
T cd03059 72 RF 73 (73)
T ss_pred hC
Confidence 75
No 27
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.66 E-value=3.6e-16 Score=119.35 Aligned_cols=76 Identities=20% Similarity=0.205 Sum_probs=66.2
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+++.|++|++|+++|+++|++|+.+.++.. +++...+++. ++||.++||+|+++ |.+++||.||++||++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~---~~~~~~~~~~-~~~p~~~vP~L~~~--~~~l~eS~aI~~Yl~~ 74 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLR---KGEQLTPEFK-KINPFGKVPAIVDG--DFTLAESVAILRYLAR 74 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCC---CCCcCCHHHH-HhCcCCCCCEEEEC--CEEEEcHHHHHHHHHh
Confidence 5799999999999999999999999999888752 3444556666 89999999999985 7899999999999998
Q ss_pred hc
Q 019273 215 QY 216 (343)
Q Consensus 215 ~y 216 (343)
+|
T Consensus 75 ~~ 76 (76)
T cd03050 75 KF 76 (76)
T ss_pred hC
Confidence 75
No 28
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.66 E-value=3.1e-16 Score=117.98 Aligned_cols=74 Identities=26% Similarity=0.324 Sum_probs=63.8
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
++||+++.||+|+|+|++|+++|++|+.+.++.. ++++..+++. ++||.++||+|+++ +|..++||.||++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~---~~~~~~~~~~-~~~p~~~vP~l~~~-~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLA---AGEQRSPEFL-AKNPAGTVPVLELD-DGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecc---cCccCCHHHH-hhCCCCCCCEEEeC-CCCEEecHHHHHHHhC
Confidence 5899999999999999999999999999888752 3344556666 99999999999864 4789999999999985
No 29
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.66 E-value=2.1e-16 Score=119.35 Aligned_cols=70 Identities=36% Similarity=0.556 Sum_probs=57.8
Q ss_pred CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhh
Q 019273 142 ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQ 215 (343)
Q Consensus 142 ~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~ 215 (343)
.||||+||+++|+++||+|+...++.. +++..+.+++. ++||.++||+|+|+ +|.+++||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~--~~~~~~~~~~~-~~~p~~~VP~L~~~-~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLI--PKGEQKPPEFL-ALNPRGKVPVLVDP-DGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETT--TTBCTTCHBHH-HHSTT-SSSEEEET-TTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeee--cCccccChhhh-ccCcCeEEEEEEEC-CCCEeeCHHHHHHHHhcC
Confidence 499999999999999999999887532 34444556666 99999999999997 689999999999999974
No 30
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.65 E-value=5.3e-16 Score=118.04 Aligned_cols=75 Identities=25% Similarity=0.331 Sum_probs=65.4
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+++.||+|+++|++|+++|++|+.+.++.. .++++.+++. ++||.++||+|+++ |..++||.||++||++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~---~~~~~~~~~~-~~~P~~~vP~l~~~--g~~l~es~aI~~yL~~ 75 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLT---KGEHKSPEHL-ARNPFGQIPALEDG--DLKLFESRAITRYLAE 75 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCcc---ccccCCHHHH-hhCCCCCCCEEEEC--CEEEEcHHHHHHHHhh
Confidence 7899999999999999999999999999887752 2344556666 99999999999985 8899999999999986
Q ss_pred h
Q 019273 215 Q 215 (343)
Q Consensus 215 ~ 215 (343)
+
T Consensus 76 ~ 76 (76)
T cd03053 76 K 76 (76)
T ss_pred C
Confidence 3
No 31
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.64 E-value=6.6e-16 Score=116.50 Aligned_cols=69 Identities=28% Similarity=0.419 Sum_probs=60.9
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHH
Q 019273 136 QLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYL 212 (343)
Q Consensus 136 ~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL 212 (343)
+||+++.||||+||+++|+++|++|+.+.++.. ...+++. ++||.++||+|+++ +|..|+||.+|++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~------~~~~~~~-~~np~~~vP~L~~~-~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELREVELK------NKPAEML-AASPKGTVPVLVLG-NGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCC------CCCHHHH-HHCCCCCCCEEEEC-CCcEEecHHHHHHhh
Confidence 799999999999999999999999999888752 2235666 89999999999985 588999999999997
No 32
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.64 E-value=9.3e-16 Score=117.22 Aligned_cols=77 Identities=21% Similarity=0.264 Sum_probs=66.2
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+++.| +|++|+++|+++|++|+.+.++. .+++++.+++. ++||.++||+|+++ +|..++||.+|++||++
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~---~~~~~~~~~~~-~~np~~~vP~l~~~-~g~~l~eS~aI~~yL~~ 74 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDL---RTKTQKGADYL-AINPKGQVPALVLD-DGEVLTESAAILQYLAD 74 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEec---ccCccCCHhHH-HhCCCCCCCEEEEC-CCcEEEcHHHHHHHHHH
Confidence 579999966 68999999999999999988875 24455667777 89999999999985 47899999999999999
Q ss_pred hcC
Q 019273 215 QYG 217 (343)
Q Consensus 215 ~y~ 217 (343)
+|+
T Consensus 75 ~~p 77 (77)
T cd03057 75 LHP 77 (77)
T ss_pred hCc
Confidence 875
No 33
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.64 E-value=8.6e-16 Score=115.49 Aligned_cols=73 Identities=29% Similarity=0.498 Sum_probs=64.2
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
++||+++.||+|++++++|+++|++|+.+.+++. +++++.+++. ++||.++||+|+++ |.+++||.||++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~---~~~~~~~~~~-~~~p~~~vP~l~~~--~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDIL---KGETRTPEFL-ALNPNGEVPVLELD--GRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCC---CcccCCHHHH-HhCCCCCCCEEEEC--CEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999888752 3445666776 89999999999985 889999999999984
No 34
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.63 E-value=1.1e-15 Score=116.05 Aligned_cols=73 Identities=25% Similarity=0.347 Sum_probs=63.4
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCC-ceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGK-EQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~-~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
|+||+++.||+|+|++++|+++|++|+.+.++.. ++.+++. ++||. ++||+|+++ |.+++||.||++||+
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~------~~~~~~~-~~~p~~~~vP~l~~~--~~~l~eS~aI~~yL~ 71 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLG------NKSELLL-ASNPVHKKIPVLLHN--GKPICESLIIVEYID 71 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc------cCCHHHH-HhCCCCCCCCEEEEC--CEEeehHHHHHHHHH
Confidence 5899999999999999999999999998876641 3445666 89995 999999985 789999999999999
Q ss_pred hhc
Q 019273 214 QQY 216 (343)
Q Consensus 214 ~~y 216 (343)
+++
T Consensus 72 ~~~ 74 (74)
T cd03058 72 EAW 74 (74)
T ss_pred hhC
Confidence 864
No 35
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.62 E-value=1.3e-15 Score=115.39 Aligned_cols=73 Identities=22% Similarity=0.310 Sum_probs=63.7
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
++||+++.||+|++|+++|+++|++|+.+.++. ..++++.+++. ++||.++||+|+|+ |..|+||.||++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~---~~~~~~~~~~~-~~nP~~~vP~L~~~--~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGG---QFGGLDTPEFL-AMNPNGRVPVLEDG--DFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEecc---ccccccCHHHH-hhCCCCCCCEEEEC--CEEEECHHHHHHHhC
Confidence 479999999999999999999999999887764 23445567777 89999999999995 789999999999985
No 36
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.62 E-value=1.4e-15 Score=120.92 Aligned_cols=70 Identities=19% Similarity=0.287 Sum_probs=60.8
Q ss_pred CCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhhcCCC
Q 019273 141 EACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQYGKG 219 (343)
Q Consensus 141 ~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~y~~~ 219 (343)
..||||||||++|++|||+|+.+.||+. .+.++++ ++||.|+||+|+|+ |.+++||.+|++||+++|...
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~------~~p~~~~-~~nP~g~vPvL~~~--~~~i~eS~~I~eYLde~~~~~ 89 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMK------RKPEDLK-DLAPGTQPPFLLYN--GEVKTDNNKIEEFLEETLCPP 89 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCC------CCCHHHH-HhCCCCCCCEEEEC--CEEecCHHHHHHHHHHHccCC
Confidence 4699999999999999999999888852 2335666 99999999999995 899999999999999998753
No 37
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.61 E-value=1.8e-15 Score=115.37 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=64.5
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 136 QLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 136 ~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
+||+++.||+|++++++|+++|++|+.+.+++. + +++.+++. ++||.++||+|+++ +|.+++||.||++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~---~-~~~~~~~~-~~nP~~~vP~L~~~-~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPG---K-ENKTPEFL-KKFPLGKVPAFEGA-DGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccc---c-ccCCHHHH-HhCCCCCCCEEEcC-CCCEEeeHHHHHHHHhh
Confidence 699999999999999999999999999988852 2 35667777 99999999999975 47899999999999986
No 38
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.61 E-value=1.6e-15 Score=114.21 Aligned_cols=71 Identities=31% Similarity=0.510 Sum_probs=59.5
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+++.||+|+|||++|.++|++|+.+.++. .. ....+ +.+|.++||+|+++ +|..++||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~-----~~--~~~~~-~~~~~~~vP~L~~~-~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQN-----DD--EATPI-RMIGAKQVPILEKD-DGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCC-----Cc--hHHHH-HhcCCCccCEEEeC-CCeEeehHHHHHHHHhC
Confidence 579999999999999999999999999876552 21 12334 78999999999975 47899999999999975
No 39
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.60 E-value=3.7e-15 Score=117.68 Aligned_cols=76 Identities=21% Similarity=0.322 Sum_probs=64.6
Q ss_pred CCCCcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHH
Q 019273 130 DSPTRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIV 209 (343)
Q Consensus 130 ~~~~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~ 209 (343)
.-+++++||+++.||||++|+++|+++|++|+.+.+++. ...+++. ++||.++||+|+++ +|..|+||.||+
T Consensus 14 ~~~~~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~------~~~~~~~-~~np~~~vPvL~~~-~g~~l~eS~aI~ 85 (89)
T cd03055 14 PVPGIIRLYSMRFCPYAQRARLVLAAKNIPHEVININLK------DKPDWFL-EKNPQGKVPALEID-EGKVVYESLIIC 85 (89)
T ss_pred CCCCcEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCC------CCcHHHH-hhCCCCCcCEEEEC-CCCEEECHHHHH
Confidence 345689999999999999999999999999998877742 1234555 89999999999974 478999999999
Q ss_pred HHHh
Q 019273 210 NYLF 213 (343)
Q Consensus 210 ~YL~ 213 (343)
+||+
T Consensus 86 ~yLe 89 (89)
T cd03055 86 EYLD 89 (89)
T ss_pred HhhC
Confidence 9995
No 40
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.60 E-value=3.9e-15 Score=113.75 Aligned_cols=74 Identities=20% Similarity=0.451 Sum_probs=61.5
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCC--CCeeecCHHHHHHH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPN--TGVSMYESGDIVNY 211 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n--~g~~l~ES~aI~~Y 211 (343)
.++||+++.||||++|+++|.++|++|+.+.++.. ...+ + +.||.++||+|++++ +|.+|+||.+|++|
T Consensus 1 ~i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~-------~~~~-~-~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~y 71 (77)
T cd03040 1 KITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPV-------SRKE-I-KWSSYKKVPILRVESGGDGQQLVDSSVIIST 71 (77)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCceEEEECCch-------hHHH-H-HHhCCCccCEEEECCCCCccEEEcHHHHHHH
Confidence 37899999999999999999999999998766531 1223 4 679999999999752 47899999999999
Q ss_pred Hhhhc
Q 019273 212 LFQQY 216 (343)
Q Consensus 212 L~~~y 216 (343)
|+++.
T Consensus 72 L~~~~ 76 (77)
T cd03040 72 LKTYL 76 (77)
T ss_pred HHHHc
Confidence 99864
No 41
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.59 E-value=5.4e-15 Score=112.25 Aligned_cols=76 Identities=24% Similarity=0.368 Sum_probs=65.5
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+++. ++|++|+++|+++|++|+.+.++. .+++.+.+++. ++||.++||+|+++ |..|+||.||++||++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~---~~~~~~~~~~~-~~~p~~~vP~l~~~--g~~l~es~aI~~yL~~ 73 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDR---GPGEQAPPEYL-AINPLGKVPVLVDG--DLVLTESAAIILYLAE 73 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCC---CCCccCCHHHH-hcCCCCCCCEEEEC--CEEEEcHHHHHHHHHH
Confidence 47999885 689999999999999999988875 23455667776 89999999999985 8899999999999999
Q ss_pred hcC
Q 019273 215 QYG 217 (343)
Q Consensus 215 ~y~ 217 (343)
+|+
T Consensus 74 ~~~ 76 (76)
T cd03046 74 KYG 76 (76)
T ss_pred hCc
Confidence 875
No 42
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.58 E-value=3.9e-15 Score=113.11 Aligned_cols=73 Identities=15% Similarity=0.069 Sum_probs=62.9
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
+++||+++.|++|+++|++|+++|++|+.+.++. ++..+++. ++||.++||+|+|+ |.+|+||.||++||+
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~------~~~~~~~~-~~~p~~~vP~l~~~--~~~l~es~aI~~yL~ 71 (73)
T cd03076 1 PYTLTYFPVRGRAEAIRLLLADQGISWEEERVTY------EEWQESLK-PKMLFGQLPCFKDG--DLTLVQSNAILRHLG 71 (73)
T ss_pred CcEEEEeCCcchHHHHHHHHHHcCCCCEEEEecH------HHhhhhhh-ccCCCCCCCEEEEC--CEEEEcHHHHHHHHh
Confidence 3799999999999999999999999999888764 12334555 89999999999985 789999999999998
Q ss_pred hh
Q 019273 214 QQ 215 (343)
Q Consensus 214 ~~ 215 (343)
++
T Consensus 72 ~~ 73 (73)
T cd03076 72 RK 73 (73)
T ss_pred cC
Confidence 63
No 43
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.58 E-value=6.3e-15 Score=110.87 Aligned_cols=73 Identities=23% Similarity=0.300 Sum_probs=64.1
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
++||++..|++|+++|++|+++|++|+.+.+++. ++++..+++. ++||.++||+|+|+ |..++||.||++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~---~~~~~~~~~~-~~~p~~~vP~l~~~--~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLL---KGEQLSPAYR-ALNPQGLVPTLVID--GLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCc---cCCcCChHHH-HhCCCCCCCEEEEC--CEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999988863 3445566776 89999999999995 789999999999985
No 44
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.56 E-value=9.7e-15 Score=110.40 Aligned_cols=71 Identities=24% Similarity=0.359 Sum_probs=61.2
Q ss_pred EEEEEeCCChhHHHHHHHHHH--cCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHH
Q 019273 135 LQLFEFEACPFCRRVREAITE--LDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYL 212 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~e--lgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL 212 (343)
++||+++.||+|+|+|++|++ +|++|+.+.++. ..+.+++. ++||.++||+|+++ +|..++||.||++||
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~------~~~~~~~~-~~~p~~~vP~l~~~-~g~~l~es~aI~~yL 72 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNP------WSDDESLL-AVNPLGKIPALVLD-DGEALFDSRVICEYL 72 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCc------ccCChHHH-HhCCCCCCCEEEEC-CCCEEECHHHHHhhh
Confidence 589999999999999999999 899999887763 23445666 89999999999864 478999999999998
Q ss_pred h
Q 019273 213 F 213 (343)
Q Consensus 213 ~ 213 (343)
+
T Consensus 73 e 73 (73)
T cd03049 73 D 73 (73)
T ss_pred C
Confidence 5
No 45
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.56 E-value=6.3e-15 Score=111.26 Aligned_cols=72 Identities=17% Similarity=0.103 Sum_probs=61.2
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+++.|++|++||++|+++|++|+.+.++.. +....++. ++||.++||+|+|+ |..++||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~-----~~~~~~~~-~~~p~~~vP~L~~~--~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYE-----EWPELDLK-PTLPFGQLPVLEID--GKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHH-----Hhhhhhhc-cCCcCCCCCEEEEC--CEEEEecHHHHHHhhC
Confidence 5899999999999999999999999998887742 12223455 89999999999985 7899999999999974
No 46
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=4e-14 Score=129.87 Aligned_cols=182 Identities=20% Similarity=0.222 Sum_probs=122.6
Q ss_pred CcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeec--CCCCC-------------------------cccHHHHHh--
Q 019273 133 TRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFP--CPKGS-------------------------IRHREMVRR-- 183 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~--~~~~~-------------------------~~~~~~l~~-- 183 (343)
.++.||..-.|||++|..++++.|||+-.+-...+.. ..+|. ..-+++...
T Consensus 36 gryhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~ 115 (319)
T KOG2903|consen 36 GRYHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIAS 115 (319)
T ss_pred ceEEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcC
Confidence 7899999999999999999999999864322211111 01111 011222211
Q ss_pred --hCCCceeeEEEcCCCCe-eecCHHHHHHHHhhhcCC----CCCC--CCCHHH-HHHHHhhhhHHHhhcc-chhhhhhc
Q 019273 184 --LGGKEQFPFLIDPNTGV-SMYESGDIVNYLFQQYGK----GRSP--STGLLE-STLITGWMPTIFRAGR-GMTLWEKA 252 (343)
Q Consensus 184 --~np~~~VP~Lvd~n~g~-~l~ES~aI~~YL~~~y~~----~~~~--p~~~~e-ra~v~~Wl~~~~~~~~-g~~~~~~~ 252 (343)
.+++.+||||+|-.+.. +-+||.+|++.++..|.+ ...+ ...|.+ +++++.|..++...++ |+++++++
T Consensus 116 p~Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~L~~~Ide~N~wvy~~INNGVYk~GFA 195 (319)
T KOG2903|consen 116 PNYTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSSLRAQIDETNSWVYDKINNGVYKCGFA 195 (319)
T ss_pred CCCCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHHHHHHHhhhhceecccccCceeeeccc
Confidence 24577999999975443 589999999999954432 1111 223333 7888888877766666 77777765
Q ss_pred CCCCCcchhhhhccCCChHHHHHHHHHHHhcc----------CcccccccccCCccchhHhhhCCCeEeEEE--cC----
Q 019273 253 RPDPPSKKLELFSYENNPYARIVREALCELEL----------PYILQNVGDGSSRTKLLVDITGSKEVPYLI--DP---- 316 (343)
Q Consensus 253 ~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~----------pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~---- 316 (343)
.. ..+|..+|+.+++.||. .|+ ||+++| .|||. +++.++ |+
T Consensus 196 ~~-------------~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~---~G~~LT----eaDir---Ly~TiIRFD~VY~~ 252 (319)
T KOG2903|consen 196 EK-------------QEAYEEEVNQLFEALDRCEDVLGKNRKYFL---CGDTLT----EADIR---LYTTIIRFDEVYVQ 252 (319)
T ss_pred cc-------------cchHHHHHHHHHHHHHHHHHHHhcccceEe---eccccc----hhhee---eeeeEEeehhhhhe
Confidence 43 34566666666655553 589 999999 99999 888776 32
Q ss_pred CCCCC----CCChHHHHHHHHHHhc
Q 019273 317 NTSTQ----IGDYKKILSYLFQSYS 337 (343)
Q Consensus 317 ~~g~~----l~e~p~I~awl~r~~~ 337 (343)
.+.+. ..+||+|..|+.++|.
T Consensus 253 hFKCn~~~ir~~Yp~l~~~lk~iY~ 277 (319)
T KOG2903|consen 253 HFKCNKKTIRDEYPNLHNWLKNIYW 277 (319)
T ss_pred eeecchhhhhccCcHHHHHHHHHHh
Confidence 33333 3589999999999987
No 47
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.55 E-value=1.6e-14 Score=110.18 Aligned_cols=68 Identities=24% Similarity=0.470 Sum_probs=59.8
Q ss_pred cEEEEEeC-------CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHH
Q 019273 134 RLQLFEFE-------ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESG 206 (343)
Q Consensus 134 ~l~LY~~~-------~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~ 206 (343)
|++||.++ .||+|+||+++|+++|++|+.+.++. . ++||.++||+|+++ |.+++||.
T Consensus 1 m~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~-------------~-~~~p~g~vPvl~~~--g~~l~eS~ 64 (75)
T cd03080 1 MITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL-------------A-KRSPKGKLPFIELN--GEKIADSE 64 (75)
T ss_pred CEEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc-------------c-cCCCCCCCCEEEEC--CEEEcCHH
Confidence 57899998 57999999999999999999765542 1 68999999999985 88999999
Q ss_pred HHHHHHhhhcC
Q 019273 207 DIVNYLFQQYG 217 (343)
Q Consensus 207 aI~~YL~~~y~ 217 (343)
+|++||+++|+
T Consensus 65 ~I~~yL~~~~~ 75 (75)
T cd03080 65 LIIDHLEEKYG 75 (75)
T ss_pred HHHHHHHHHcC
Confidence 99999999875
No 48
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.54 E-value=1.7e-14 Score=112.28 Aligned_cols=71 Identities=20% Similarity=0.184 Sum_probs=58.5
Q ss_pred CCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhhcC
Q 019273 141 EACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQYG 217 (343)
Q Consensus 141 ~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~y~ 217 (343)
..||+|+|||++|.++|++|+.+.++.. +.++.. +.+ ++||.++||+|+|+ +|..|+||.+|++||+++|+
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~---~~~~~~-~~~-~~~p~~~vP~L~~~-~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFP---DIPPIL-GEL-TSGGFYTVPVIVDG-SGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCC---Cccccc-ccc-cCCCCceeCeEEEC-CCCEEeCHHHHHHHHHHhCc
Confidence 4699999999999999999999887752 222222 334 78999999999984 47889999999999999875
No 49
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.53 E-value=5.2e-14 Score=107.94 Aligned_cols=73 Identities=25% Similarity=0.341 Sum_probs=60.8
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCC-ceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGK-EQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~-~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
++||.+++ +|.++|++|+++|++|+.+.+|+ .+++++.+++. +.||. |+||+|+|+ +|..++||.||++||+
T Consensus 3 l~l~~~~~--~~~~~r~~l~~~gv~~e~~~v~~---~~~~~~~~e~~-~~~p~~g~vP~l~~~-~~~~l~es~AI~~YLa 75 (76)
T PF02798_consen 3 LTLYNGRG--RSERIRLLLAEKGVEYEDVRVDF---EKGEHKSPEFL-AINPMFGKVPALEDG-DGFVLTESNAILRYLA 75 (76)
T ss_dssp EEEESSST--TTHHHHHHHHHTT--EEEEEEET---TTTGGGSHHHH-HHTTTSSSSSEEEET-TTEEEESHHHHHHHHH
T ss_pred EEEECCCC--chHHHHHHHHHhcccCceEEEec---ccccccchhhh-hcccccceeeEEEEC-CCCEEEcHHHHHHHhC
Confidence 45555554 89999999999999999998886 35666677877 99999 999999996 6999999999999998
Q ss_pred h
Q 019273 214 Q 214 (343)
Q Consensus 214 ~ 214 (343)
+
T Consensus 76 ~ 76 (76)
T PF02798_consen 76 R 76 (76)
T ss_dssp H
T ss_pred C
Confidence 5
No 50
>PLN02907 glutamate-tRNA ligase
Probab=99.52 E-value=6.3e-14 Score=147.99 Aligned_cols=146 Identities=13% Similarity=0.098 Sum_probs=107.2
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+.+.++ +.++.++|+++|++|+.+. .+|.++||+|+++ +|..|+||.||++||++
T Consensus 3 ~kLy~~~~S~-~~~v~~~L~~lgv~~e~~~-------------------~~p~GkVPvLv~d-dG~~L~ES~AIl~YLa~ 61 (722)
T PLN02907 3 AKLSFPPDSP-PLAVIAAAKVAGVPLTIDP-------------------SLKSGSAPTLLFS-SGEKLTGTNVLLRYIAR 61 (722)
T ss_pred EEEEECCCCC-hHHHHHHHHHcCCCcEEee-------------------cCCCCCCcEEEEC-CCCEEECHHHHHHHHHH
Confidence 7899988654 6779999999999999421 2589999999964 58899999999999999
Q ss_pred hcCCCCCCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhc-----cCcccc
Q 019273 215 QYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELE-----LPYILQ 289 (343)
Q Consensus 215 ~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le-----~pyL~~ 289 (343)
.|+...+.|.++.+++++.+|+.+..... .. ..+.+.|+.|| .+|+
T Consensus 62 ~~p~~~L~p~d~~erAqV~qWL~~~~~~~-------------~~--------------~~l~~~L~~LE~~L~~rtYL-- 112 (722)
T PLN02907 62 SASLPGFYGQDAFESSQVDEWLDYAPTFS-------------SG--------------SEFENACEYVDGYLASRTFL-- 112 (722)
T ss_pred hCCCcCCCCCCHHHHHHHHHHHHHHhhcc-------------cH--------------HHHHHHHHHHHHHhccCCee--
Confidence 99876666788999999999997642210 00 01223333333 3899
Q ss_pred cccccCCccchhHhhhCCCeEeEEEc---CCCCC-CCCChHHHHHHHHHHhcC
Q 019273 290 NVGDGSSRTKLLVDITGSKEVPYLID---PNTST-QIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 290 ~vGd~~T~~~~lADi~g~~~~p~L~~---~~~g~-~l~e~p~I~awl~r~~~~ 338 (343)
+|+++| +|||+ +++.+.. ...+. .+.++|+|.+|++++.++
T Consensus 113 -vGd~lT----LADIa---L~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~ar 157 (722)
T PLN02907 113 -VGYSLT----IADIA---IWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAE 157 (722)
T ss_pred -cCCCCC----HHHHH---HHHHHHhhhhhhhcccccccCHHHHHHHHHHHhC
Confidence 999999 99999 4443210 01111 257899999999999764
No 51
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.51 E-value=4.8e-14 Score=109.82 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=61.9
Q ss_pred EEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcc-cHHHHHhh----CCCceeeEEEcCCCCeeecCHHHHHH
Q 019273 136 QLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIR-HREMVRRL----GGKEQFPFLIDPNTGVSMYESGDIVN 210 (343)
Q Consensus 136 ~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~-~~~~l~~~----np~~~VP~Lvd~n~g~~l~ES~aI~~ 210 (343)
+||++..+++|++++++|+++|++|+.+.+++. ++++. .+++.... +|.++||+|+|+ |.+|+||.||++
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~---~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~--g~~l~ES~AIl~ 76 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELG---DAPDYDRSQWLNEKFKLGLDFPNLPYYIDG--DVKLTQSNAILR 76 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEEEeccC---CccccchHhhhccchhcCCcCCCCCEEEEC--CEEEeehHHHHH
Confidence 689999899999999999999999999988863 33332 23444222 299999999985 889999999999
Q ss_pred HHhhhc
Q 019273 211 YLFQQY 216 (343)
Q Consensus 211 YL~~~y 216 (343)
||+++|
T Consensus 77 YLa~~~ 82 (82)
T cd03075 77 YIARKH 82 (82)
T ss_pred HHhhcC
Confidence 999875
No 52
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.47 E-value=2.1e-13 Score=105.37 Aligned_cols=71 Identities=17% Similarity=0.236 Sum_probs=59.6
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhh-----CCCceeeEEEcCCCCeeecCHHHHH
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRL-----GGKEQFPFLIDPNTGVSMYESGDIV 209 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~-----np~~~VP~Lvd~n~g~~l~ES~aI~ 209 (343)
++||+++.+++|++++++|+++|++|+.+.+++. +++. +. .|.++||+|+|+ |.+|+||.||+
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~---------~~~~-~~~~~~~~~~g~vP~L~~~--g~~l~ES~AI~ 69 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA---------EDLE-KLKKDGSLMFQQVPMVEID--GMKLVQTRAIL 69 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH---------HHHH-hhccccCCCCCCCCEEEEC--CEEEeeHHHHH
Confidence 5799999999999999999999999998877641 1222 23 358999999984 78999999999
Q ss_pred HHHhhhcC
Q 019273 210 NYLFQQYG 217 (343)
Q Consensus 210 ~YL~~~y~ 217 (343)
+||+++|+
T Consensus 70 ~YL~~~~~ 77 (79)
T cd03077 70 NYIAGKYN 77 (79)
T ss_pred HHHHHHcC
Confidence 99999886
No 53
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.44 E-value=8.9e-14 Score=127.59 Aligned_cols=85 Identities=20% Similarity=0.275 Sum_probs=75.7
Q ss_pred CCCCcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHH
Q 019273 130 DSPTRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIV 209 (343)
Q Consensus 130 ~~~~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~ 209 (343)
.++..+.||+++.+--++|||+++.||||+|+...|++ +.|++..+.|+ .+||.+.||||+++ ..+|.++..|+
T Consensus 22 ~~~e~~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l---~~geh~epwFm-rlNp~gevPVl~~g--~~II~d~tqII 95 (325)
T KOG4420|consen 22 WPRESLVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSL---PQGEHKEPWFM-RLNPGGEVPVLIHG--DNIISDYTQII 95 (325)
T ss_pred CchhcceeeecCcccccceeeeehhhcccccceeeccC---ccccccCchhe-ecCCCCCCceEecC--CeecccHHHHH
Confidence 34445999999999889999999999999999999887 57888888888 99999999999996 67899999999
Q ss_pred HHHhhhcCCCC
Q 019273 210 NYLFQQYGKGR 220 (343)
Q Consensus 210 ~YL~~~y~~~~ 220 (343)
+||+++|-+..
T Consensus 96 dYvErtf~ger 106 (325)
T KOG4420|consen 96 DYVERTFTGER 106 (325)
T ss_pred HHHHHhhcccc
Confidence 99999997653
No 54
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.43 E-value=4.5e-13 Score=101.85 Aligned_cols=67 Identities=15% Similarity=0.283 Sum_probs=57.1
Q ss_pred eCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 140 FEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 140 ~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
...||+|++|+++|+++|++|+.+.++.. + ++..+++. ++||.++||+|+++ |.+++||.+|++||+
T Consensus 7 ~~~s~~s~~v~~~L~~~gl~~e~~~v~~~---~-~~~~~~~~-~~nP~g~vP~L~~~--g~~l~eS~aI~~YL~ 73 (73)
T cd03043 7 KNYSSWSLRPWLLLKAAGIPFEEILVPLY---T-PDTRARIL-EFSPTGKVPVLVDG--GIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCHHHHHHHHHHHHcCCCCEEEEeCCC---C-ccccHHHH-hhCCCCcCCEEEEC--CEEEEcHHHHHHHhC
Confidence 45799999999999999999999888752 2 23456666 99999999999985 889999999999984
No 55
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.43 E-value=6.6e-13 Score=97.02 Aligned_cols=71 Identities=32% Similarity=0.441 Sum_probs=59.8
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
++||+++.||+|++++++|+++|++|+.+.++.. .. ...++. +++|.+++|+|+++ |..++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~---~~--~~~~~~-~~~~~~~~P~l~~~--~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLG---EG--EQEEFL-ALNPLGKVPVLEDG--GLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCC---CC--CCHHHH-hcCCCCCCCEEEEC--CEEEEcHHHHHHHhC
Confidence 4799999999999999999999999998877642 11 112444 89999999999996 889999999999985
No 56
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.38 E-value=1.4e-12 Score=98.37 Aligned_cols=64 Identities=20% Similarity=0.392 Sum_probs=54.9
Q ss_pred EEEEeC-------CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHH
Q 019273 136 QLFEFE-------ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDI 208 (343)
Q Consensus 136 ~LY~~~-------~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI 208 (343)
+||.++ .||+|++++++|+++|++|+.+.++. . .+||.++||+|+++ |..++||.+|
T Consensus 2 ~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~-------------~-~~~p~g~vP~l~~~--g~~l~es~~I 65 (72)
T cd03054 2 ELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSN-------------P-WRSPTGKLPFLELN--GEKIADSEKI 65 (72)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCC-------------c-ccCCCcccCEEEEC--CEEEcCHHHH
Confidence 566665 89999999999999999999776652 0 27899999999985 8899999999
Q ss_pred HHHHhhh
Q 019273 209 VNYLFQQ 215 (343)
Q Consensus 209 ~~YL~~~ 215 (343)
++||+++
T Consensus 66 ~~yL~~~ 72 (72)
T cd03054 66 IEYLKKK 72 (72)
T ss_pred HHHHhhC
Confidence 9999874
No 57
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=3.6e-12 Score=111.20 Aligned_cols=182 Identities=23% Similarity=0.278 Sum_probs=114.6
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
|+||.|..||||.|+|++.-.+|+|++.+.++ .+++.++- .+-+..+||+|+-. +|..|.||.+|+.|+++
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~-----nDDe~Tp~---rmiG~KqVPiL~Ke-dg~~m~ESlDIV~y~d~ 71 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLL-----NDDEETPI---RMIGQKQVPILQKE-DGRAMPESLDIVHYVDE 71 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheec-----cCcccChh---hhhcccccceEEcc-ccccchhhhHHHHHHHH
Confidence 58999999999999999999999999987765 22333332 45679999999875 79999999999999999
Q ss_pred hcCCCCCCCCCHHHHHHHHhhhhHHHhhcc--chhhhhhcCCCCCcc--hhhhh---------cc-----CCChHHHHHH
Q 019273 215 QYGKGRSPSTGLLESTLITGWMPTIFRAGR--GMTLWEKARPDPPSK--KLELF---------SY-----ENNPYARIVR 276 (343)
Q Consensus 215 ~y~~~~~~p~~~~era~v~~Wl~~~~~~~~--g~~~~~~~~~~~p~~--~l~l~---------~~-----~~~p~~~~Vr 276 (343)
.++.+.+- ..-+.++..|+..+....+ ++++|.+........ ....+ .| ....+...+.
T Consensus 72 ~~~~~~lt---~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~ 148 (215)
T COG2999 72 LDGKPLLT---GKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQ 148 (215)
T ss_pred hcCchhhc---cCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHH
Confidence 98865321 1225678999988776665 456665422210000 01111 01 1112333455
Q ss_pred HHHHHhccCcc-ccc-ccccCCccchhHhhhCCCeEeEEE--cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 277 EALCELELPYI-LQN-VGDGSSRTKLLVDITGSKEVPYLI--DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 277 ~~L~~Le~pyL-~~~-vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
.-|+.|+. -+ .++ +-..++ +=||. .||.|. .-..|+.. -..+..|+.++...
T Consensus 149 ~dl~~l~~-Li~~~s~~n~~l~----~ddi~---vFplLRnlt~v~gi~w--ps~v~dy~~~msek 204 (215)
T COG2999 149 ADLRALDK-LIVGPSAVNGELS----EDDIL---VFPLLRNLTLVAGIQW--PSRVADYRDNMSEK 204 (215)
T ss_pred HHHHHHHH-HhcCcchhccccc----hhhhh---hhHHhccceecccCCC--cHHHHHHHHHHHHh
Confidence 55555543 22 011 233467 88898 788765 11223321 13688999887653
No 58
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=1.5e-11 Score=111.68 Aligned_cols=183 Identities=16% Similarity=0.172 Sum_probs=112.8
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
.++|+++....++..+|+++...|++||.+.+.. ++. ..+ ++...|.||+|+|..+ |..|.+|.||++||+
T Consensus 3 ~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~-----~~~-w~~-~K~~~pfgqlP~l~vD--g~~i~QS~AI~RyLA 73 (206)
T KOG1695|consen 3 PYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITM-----EDA-WEE-LKDKMPFGQLPVLEVD--GKKLVQSRAILRYLA 73 (206)
T ss_pred ceEEEecCcchhHHHHHHHHHhcCCCcceeeecc-----ccc-hhh-hcccCCCCCCCEEeEC--CEeeccHHHHHHHHH
Confidence 4799999999999999999999999999877653 221 223 2245799999999774 999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHhhhhHHHhhccchhhhh-hc-CCCCCcchhh-hhccCCChHHHHHHHHHHHhccCccccc
Q 019273 214 QQYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTLWE-KA-RPDPPSKKLE-LFSYENNPYARIVREALCELELPYILQN 290 (343)
Q Consensus 214 ~~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~~~~~-~~-~~~~p~~~l~-l~~~~~~p~~~~Vr~~L~~Le~pyL~~~ 290 (343)
++|+= -..++.|.+.++...+........+.++. .+ ...-....+. .+.-....+-..+.+.|..-...|+
T Consensus 74 rk~gl---~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgfl--- 147 (206)
T KOG1695|consen 74 RKFGL---AGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFL--- 147 (206)
T ss_pred HHhCc---CCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCee---
Confidence 99983 24567777776665543322111111110 00 0000000000 1100111222234444444344899
Q ss_pred ccccCCccchhHhhhCCCeEeEEE--cC-CCCCCCCChHHHHHHHHHHhcC
Q 019273 291 VGDGSSRTKLLVDITGSKEVPYLI--DP-NTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 291 vGd~~T~~~~lADi~g~~~~p~L~--~~-~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+||++| .||+. .+-.+. .. ...-....+|++.++.+|+++.
T Consensus 148 vGd~lT----~aDl~---i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~ 191 (206)
T KOG1695|consen 148 VGDKLT----WADLV---IAEHLDTLEELLDPSALDHFPKLKAFKERVSSI 191 (206)
T ss_pred ecCccc----HHHHH---HHHHHHHHHHhcCchhhccChHHHHHHHHHhcC
Confidence 999999 99998 333221 11 1111245678999999988764
No 59
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.24 E-value=7.6e-11 Score=105.60 Aligned_cols=161 Identities=18% Similarity=0.219 Sum_probs=106.8
Q ss_pred CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhhcCCCCC
Q 019273 142 ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQYGKGRS 221 (343)
Q Consensus 142 ~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~y~~~~~ 221 (343)
.||||+|+.+.|.+++++|.+..||+. +.++.+..+.|.+++|+|..+ +....||..|.+.|.++|+.+..
T Consensus 20 dcpf~qr~~m~L~~k~~~f~vttVd~~-------~kp~~f~~~sp~~~~P~l~~d--~~~~tDs~~Ie~~Lee~l~~p~~ 90 (221)
T KOG1422|consen 20 DCPFCQRLFMTLELKGVPFKVTTVDLS-------RKPEWFLDISPGGKPPVLKFD--EKWVTDSDKIEEFLEEKLPPPKL 90 (221)
T ss_pred CChhHHHHHHHHHHcCCCceEEEeecC-------CCcHHHHhhCCCCCCCeEEeC--CceeccHHHHHHHHHHhcCCCCC
Confidence 599999999999999999999999972 233444499999999999984 78899999999999999998765
Q ss_pred CCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhc--------cCcccccccc
Q 019273 222 PSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELE--------LPYILQNVGD 293 (343)
Q Consensus 222 ~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le--------~pyL~~~vGd 293 (343)
+..++.|.+.+..=+- ..+ ..|-.... .. .+....+.+-..|..|| .+|| .||
T Consensus 91 ~~~~~~E~asag~diF---~kF---~~fi~ksk-~~---------~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl---~Gd 151 (221)
T KOG1422|consen 91 PTLAPPESASAGSDIF---AKF---SAFIKKSK-DA---------ANDGLEKALLKELEKLDDYLKSPSRRKFL---DGD 151 (221)
T ss_pred cccCCHHHHhhHHHHH---HHH---HHHHhCch-hh---------ccchHHHHHHHHHHHHHHHhcCccCCccc---cCC
Confidence 4333455443322110 000 01100000 00 01111222222223333 3899 999
Q ss_pred cCCccchhHhhhCCCeEeEEE--------cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 294 GSSRTKLLVDITGSKEVPYLI--------DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 294 ~~T~~~~lADi~g~~~~p~L~--------~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
++| +||+. ++|-|. ..++.+ -++.+.|.+|+...|+.
T Consensus 152 ~lt----~aDcs---LlPKL~~i~va~k~yk~~~I-P~~lt~V~rYl~~~ya~ 196 (221)
T KOG1422|consen 152 KLT----LADCS---LLPKLHHIKVAAKHYKNFEI-PASLTGVWRYLKNAYAR 196 (221)
T ss_pred eee----eehhh---hchhHHHHHHHHHHhcCCCC-chhhhHHHHHHHHHHhH
Confidence 999 99999 788654 122222 46789999999999874
No 60
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.13 E-value=3.1e-10 Score=87.57 Aligned_cols=74 Identities=22% Similarity=0.405 Sum_probs=61.0
Q ss_pred CCCcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHH
Q 019273 131 SPTRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVN 210 (343)
Q Consensus 131 ~~~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~ 210 (343)
...+++||+.++||+|++++.+|+++|++|+.+.++ +. ....++. .+++..+||+++.+ |..+.++.+|++
T Consensus 6 ~~~~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~-----~~-~~~~~~~-~~~g~~~vP~i~i~--g~~igG~~~l~~ 76 (79)
T TIGR02190 6 KPESVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLG-----ND-ARGRSLR-AVTGATTVPQVFIG--GKLIGGSDELEA 76 (79)
T ss_pred CCCCEEEEECCCCHhHHHHHHHHHHcCCCcEEEECC-----CC-hHHHHHH-HHHCCCCcCeEEEC--CEEEcCHHHHHH
Confidence 445799999999999999999999999999976554 22 2233443 67889999999884 889999999999
Q ss_pred HHh
Q 019273 211 YLF 213 (343)
Q Consensus 211 YL~ 213 (343)
||+
T Consensus 77 ~l~ 79 (79)
T TIGR02190 77 YLA 79 (79)
T ss_pred HhC
Confidence 985
No 61
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.04 E-value=5.3e-10 Score=85.52 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=50.4
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
..|+. .+++|.|++++|+++|++|+.+ ++ ..+ + ..+|.|+||+|+++ |.+|.||.||+.||++
T Consensus 11 ~~~~~--~~~~~~kv~~~L~elglpye~~--~~---~~~-----~---~~~P~GkVP~L~~d--g~vI~eS~aIl~yL~~ 73 (74)
T cd03079 11 QILLP--DNASCLAVQTFLKMCNLPFNVR--CR---ANA-----E---FMSPSGKVPFIRVG--NQIVSEFGPIVQFVEA 73 (74)
T ss_pred eeecC--CCCCHHHHHHHHHHcCCCcEEE--ec---CCc-----c---ccCCCCcccEEEEC--CEEEeCHHHHHHHHhc
Confidence 45553 4678999999999999999965 22 111 1 25678999999994 8899999999999986
Q ss_pred h
Q 019273 215 Q 215 (343)
Q Consensus 215 ~ 215 (343)
+
T Consensus 74 ~ 74 (74)
T cd03079 74 K 74 (74)
T ss_pred C
Confidence 4
No 62
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.94 E-value=4.9e-09 Score=79.07 Aligned_cols=71 Identities=25% Similarity=0.392 Sum_probs=58.6
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
+++||+.++||+|.+++.+|+++|++|+.+.++- .. .. +.+....+..+||+++.+ |..+.++.+|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~-----~~-~~-~~~~~~~g~~~vP~ifi~--g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGK-----DI-TG-RSLRAVTGAMTVPQVFID--GELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCC-----Ch-hH-HHHHHHhCCCCcCeEEEC--CEEEeCHHHHHHHhC
Confidence 5899999999999999999999999999766552 22 22 334467788999999885 888999999999985
No 63
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=98.93 E-value=4.4e-09 Score=97.95 Aligned_cols=68 Identities=25% Similarity=0.499 Sum_probs=57.6
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYL 212 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL 212 (343)
.++||.|+.||||.+||.+|...||+|++++||- +.+ ... +.+-..|||+|... |..|.||..|+.-|
T Consensus 90 ~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnp--V~r------~eI-k~SsykKVPil~~~--Geqm~dSsvIIs~l 157 (370)
T KOG3029|consen 90 DLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNP--VLR------QEI-KWSSYKKVPILLIR--GEQMVDSSVIISLL 157 (370)
T ss_pred eEEEEeeccCchHHHHHHHHhhcCCceEEEEecc--hhh------hhc-cccccccccEEEec--cceechhHHHHHHH
Confidence 6899999999999999999999999999999873 222 223 56778899999874 77899999999877
No 64
>PRK10638 glutaredoxin 3; Provisional
Probab=98.90 E-value=6.6e-09 Score=80.75 Aligned_cols=73 Identities=14% Similarity=0.332 Sum_probs=59.3
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
.++||+.++||||++++.+|+++|++|+.+.|+ .......+ +.+++|..+||+|+.+ |..+....++..+-.
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~-----~~~~~~~~-l~~~~g~~~vP~i~~~--g~~igG~~~~~~~~~ 74 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGVSFQEIPID-----GDAAKREE-MIKRSGRTTVPQIFID--AQHIGGCDDLYALDA 74 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCCCcEEEECC-----CCHHHHHH-HHHHhCCCCcCEEEEC--CEEEeCHHHHHHHHH
Confidence 589999999999999999999999999977665 22223344 4489999999999874 888999988887755
Q ss_pred h
Q 019273 214 Q 214 (343)
Q Consensus 214 ~ 214 (343)
+
T Consensus 75 ~ 75 (83)
T PRK10638 75 R 75 (83)
T ss_pred c
Confidence 3
No 65
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.76 E-value=3.8e-08 Score=72.97 Aligned_cols=72 Identities=17% Similarity=0.387 Sum_probs=56.0
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeee--cCHHHHHHH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSM--YESGDIVNY 211 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l--~ES~aI~~Y 211 (343)
+++||+.++||+|++++.+|++++++|+.+.++ +..+..+++. +.++...||+|+++ |..+ ++..+|-++
T Consensus 1 ~i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~-----~~~~~~~~~~-~~~~~~~vP~~~~~--~~~~~g~~~~~i~~~ 72 (74)
T TIGR02196 1 KVKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVE-----KDSAAREEVL-KVLGQRGVPVIVIG--HKIIVGFDPEKLDQL 72 (74)
T ss_pred CEEEEcCCCChhHHHHHHHHHHCCCeEEEEecc-----CCHHHHHHHH-HHhCCCcccEEEEC--CEEEeeCCHHHHHHH
Confidence 589999999999999999999999999865443 2223334444 77889999999985 6666 788888777
Q ss_pred Hh
Q 019273 212 LF 213 (343)
Q Consensus 212 L~ 213 (343)
|+
T Consensus 73 i~ 74 (74)
T TIGR02196 73 LE 74 (74)
T ss_pred hC
Confidence 63
No 66
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.70 E-value=6.5e-08 Score=73.13 Aligned_cols=68 Identities=18% Similarity=0.157 Sum_probs=52.8
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIV 209 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~ 209 (343)
.++||+.++||+|++++.+|+++|++|+.+.++ +.....++ +.++++..+||+++.+ |..+..-.++.
T Consensus 2 ~v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~-----~~~~~~~e-l~~~~g~~~vP~v~i~--~~~iGg~~~~~ 69 (73)
T cd03027 2 RVTIYSRLGCEDCTAVRLFLREKGLPYVEINID-----IFPERKAE-LEERTGSSVVPQIFFN--EKLVGGLTDLK 69 (73)
T ss_pred EEEEEecCCChhHHHHHHHHHHCCCceEEEECC-----CCHHHHHH-HHHHhCCCCcCEEEEC--CEEEeCHHHHH
Confidence 589999999999999999999999999966554 33333444 4488999999999885 66666554443
No 67
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.66 E-value=1.2e-07 Score=69.80 Aligned_cols=70 Identities=20% Similarity=0.393 Sum_probs=56.1
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNY 211 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~Y 211 (343)
+++||..++||+|++++.+|++++++|+.+.++ +..+ ..+.+.++++..++|+++.+ |..+.++..|.+.
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~-----~~~~-~~~~l~~~~~~~~~P~~~~~--~~~igg~~~~~~~ 70 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDIL-----EDGE-LREELKELSGWPTVPQIFIN--GEFIGGYDDLKAL 70 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECC-----CCHH-HHHHHHHHhCCCCcCEEEEC--CEEEecHHHHHHh
Confidence 478999999999999999999999999855443 2333 33445578999999999884 8889999888764
No 68
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.64 E-value=1.5e-07 Score=73.12 Aligned_cols=73 Identities=18% Similarity=0.287 Sum_probs=52.6
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
+++||..++||+|++++.+|+++|++|+.+.++ .. ....+.+ ..+|..+||+++.++.-..-|+-..|-+...
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~-----~~-~~~~~~~-~~~g~~~vPvv~i~~~~~~Gf~~~~l~~~~~ 74 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEMINVD-----RV-PEAAETL-RAQGFRQLPVVIAGDLSWSGFRPDMINRLHP 74 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEEEECC-----CC-HHHHHHH-HHcCCCCcCEEEECCEEEecCCHHHHHHHHH
Confidence 589999999999999999999999999976655 22 2233444 4468899999998622223555555555443
No 69
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=1.6e-07 Score=72.85 Aligned_cols=72 Identities=19% Similarity=0.381 Sum_probs=54.5
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNY 211 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~Y 211 (343)
.+++|..++||||.+++-+|.++|++|+.+.++. ......+++....+|..+||+++.+ |..+.-...+-++
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~----~~~~~~~~~~~~~~g~~tvP~I~i~--~~~igg~~d~~~~ 73 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDD----DEPEEAREMVKRGKGQRTVPQIFIG--GKHVGGCDDLDAL 73 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEEEEecC----CcHHHHHHHHHHhCCCCCcCEEEEC--CEEEeCcccHHHH
Confidence 5899999999999999999999999999877763 1112445677566799999999985 5555544444444
No 70
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.60 E-value=1.4e-07 Score=69.82 Aligned_cols=57 Identities=16% Similarity=0.432 Sum_probs=46.0
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
.+++|+.++||+|++++.+|++++++|..+.++ .+.+..+++ .++||.++||+|+++
T Consensus 1 ~v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~-----~~~~~~~~~-~~~~~~~~vP~i~~~ 57 (73)
T cd02976 1 EVTVYTKPDCPYCKATKRFLDERGIPFEEVDVD-----EDPEALEEL-KKLNGYRSVPVVVIG 57 (73)
T ss_pred CEEEEeCCCChhHHHHHHHHHHCCCCeEEEeCC-----CCHHHHHHH-HHHcCCcccCEEEEC
Confidence 378999999999999999999999999976554 222333344 488999999999986
No 71
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.60 E-value=2.9e-07 Score=69.30 Aligned_cols=72 Identities=14% Similarity=0.300 Sum_probs=54.1
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhC-CCceeeEEEcCCCCee--ecCHHHHHHH
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLG-GKEQFPFLIDPNTGVS--MYESGDIVNY 211 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~n-p~~~VP~Lvd~n~g~~--l~ES~aI~~Y 211 (343)
++||+.++||+|++++.+|++++++|+.+.++ ++. ...+++.++| +..+||+++.+ +|.. -.++..|..+
T Consensus 2 v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~-----~~~-~~~~~~~~~~~~~~~vP~i~~~-~g~~l~~~~~~~~~~~ 74 (77)
T TIGR02200 2 ITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIE-----EDE-GAADRVVSVNNGNMTVPTVKFA-DGSFLTNPSAAQVKAK 74 (77)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCceEEEeCc-----CCH-hHHHHHHHHhCCCceeCEEEEC-CCeEecCCCHHHHHHH
Confidence 78999999999999999999999999865443 232 2334555777 89999999754 4665 4456677777
Q ss_pred Hh
Q 019273 212 LF 213 (343)
Q Consensus 212 L~ 213 (343)
|.
T Consensus 75 l~ 76 (77)
T TIGR02200 75 LQ 76 (77)
T ss_pred hh
Confidence 64
No 72
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.57 E-value=2.4e-07 Score=69.84 Aligned_cols=71 Identities=15% Similarity=0.301 Sum_probs=54.9
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCc-eeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKE-QFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~-~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
++||+.+.||+|.+++.+|+++|++|+.+.|+. ..+..+++. +..+.. +||+++.+ |..+....++.++-.
T Consensus 2 i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~-----~~~~~~~~~-~~~~~~~~vP~v~i~--g~~igg~~~~~~~~~ 73 (75)
T cd03418 2 VEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDG-----DPALREEMI-NRSGGRRTVPQIFIG--DVHIGGCDDLYALER 73 (75)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCcEEEEECCC-----CHHHHHHHH-HHhCCCCccCEEEEC--CEEEeChHHHHHHHh
Confidence 789999999999999999999999999766552 222333444 454544 99999884 888999988887743
No 73
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=98.55 E-value=7.1e-07 Score=82.94 Aligned_cols=72 Identities=24% Similarity=0.463 Sum_probs=59.1
Q ss_pred CcEEEEEeC-------CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCH
Q 019273 133 TRLQLFEFE-------ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYES 205 (343)
Q Consensus 133 ~~l~LY~~~-------~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES 205 (343)
+.+-||.++ .||||.+|...|...+||||. .++ . +...+.+|++|.++- +|..+.+|
T Consensus 44 D~VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~-----~~~---~------~~~rSr~G~lPFIEL--NGe~iaDS 107 (281)
T KOG4244|consen 44 DTVYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEI-----VDC---S------LKRRSRNGTLPFIEL--NGEHIADS 107 (281)
T ss_pred CeEEEEeccccCCCCCCChHHHHHHHHHHHhCCCcee-----ccc---c------ceeeccCCCcceEEe--CCeecccc
Confidence 457799986 589999999999999999993 221 1 114678999999987 49999999
Q ss_pred HHHHHHHhhhcCCCC
Q 019273 206 GDIVNYLFQQYGKGR 220 (343)
Q Consensus 206 ~aI~~YL~~~y~~~~ 220 (343)
.-|+.+|.+.|.-+.
T Consensus 108 ~~I~~~L~~hf~~~~ 122 (281)
T KOG4244|consen 108 DLIEDRLRKHFKIPD 122 (281)
T ss_pred HHHHHHHHHHcCCCC
Confidence 999999999988654
No 74
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.54 E-value=4.7e-07 Score=70.99 Aligned_cols=75 Identities=16% Similarity=0.383 Sum_probs=55.9
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCC-----CeEEEEeeeecCCCCCcccHHHHHhhCCC--ceeeEEEcCCCCeeecCHHH
Q 019273 135 LQLFEFEACPFCRRVREAITELDL-----SVEWMYEQVFPCPKGSIRHREMVRRLGGK--EQFPFLIDPNTGVSMYESGD 207 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl-----~ye~~~vdl~~~~~~~~~~~~~l~~~np~--~~VP~Lvd~n~g~~l~ES~a 207 (343)
+++|+.++||+|.+++.+|+++++ +|+.+.++ .......+ +.+..+. .+||+++.+ |..+.++.+
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~-----~~~~~~~~-l~~~~g~~~~tVP~ifi~--g~~igG~~d 73 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIH-----AEGISKAD-LEKTVGKPVETVPQIFVD--EKHVGGCTD 73 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECC-----CCHHHHHH-HHHHhCCCCCCcCeEEEC--CEEecCHHH
Confidence 689999999999999999999954 55543332 11111223 3355554 699999874 889999999
Q ss_pred HHHHHhhhcC
Q 019273 208 IVNYLFQQYG 217 (343)
Q Consensus 208 I~~YL~~~y~ 217 (343)
|..|+.+.++
T Consensus 74 l~~~~~~~~~ 83 (86)
T TIGR02183 74 FEQLVKENFD 83 (86)
T ss_pred HHHHHHhccc
Confidence 9999998765
No 75
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.49 E-value=9.5e-07 Score=67.57 Aligned_cols=75 Identities=16% Similarity=0.329 Sum_probs=61.0
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
+++|+.++||+|.+++.+|++++++|+.+.++... ......+.+.++++..++|++..+ |..+.+...|+++..+
T Consensus 2 v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~g~~~~P~v~~~--g~~igg~~~~~~~~~~ 76 (82)
T cd03419 2 VVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHE---DGSEIQDYLQELTGQRTVPNVFIG--GKFIGGCDDLMALHKS 76 (82)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCC---ChHHHHHHHHHHhCCCCCCeEEEC--CEEEcCHHHHHHHHHc
Confidence 78999999999999999999999999988877421 112223445578888899999884 8889999999998765
No 76
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.48 E-value=9e-07 Score=68.93 Aligned_cols=76 Identities=20% Similarity=0.389 Sum_probs=59.0
Q ss_pred cEEEEEeCCChhHHHHHHHHHH-----cCCCeEEEEeeeecCCCCCcccHHHHHhhCCC--ceeeEEEcCCCCeeecCHH
Q 019273 134 RLQLFEFEACPFCRRVREAITE-----LDLSVEWMYEQVFPCPKGSIRHREMVRRLGGK--EQFPFLIDPNTGVSMYESG 206 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~e-----lgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~--~~VP~Lvd~n~g~~l~ES~ 206 (343)
.+++|+.++||+|.+++-+|++ .|++|+.+.++. ......+ +....+. .+||+++.+ |..+....
T Consensus 2 ~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~-----~~~~~~e-l~~~~~~~~~~vP~ifi~--g~~igg~~ 73 (85)
T PRK11200 2 FVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHA-----EGISKAD-LEKTVGKPVETVPQIFVD--QKHIGGCT 73 (85)
T ss_pred EEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCC-----ChHHHHH-HHHHHCCCCCcCCEEEEC--CEEEcCHH
Confidence 4899999999999999999999 789999665542 1111223 3344443 689999874 89999999
Q ss_pred HHHHHHhhhcC
Q 019273 207 DIVNYLFQQYG 217 (343)
Q Consensus 207 aI~~YL~~~y~ 217 (343)
+|.+++.+.|+
T Consensus 74 ~~~~~~~~~~~ 84 (85)
T PRK11200 74 DFEAYVKENLG 84 (85)
T ss_pred HHHHHHHHhcc
Confidence 99999998775
No 77
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.47 E-value=7.3e-07 Score=67.29 Aligned_cols=55 Identities=16% Similarity=0.368 Sum_probs=43.3
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
++||+.++||+|++++.+|+++|++|+.+.++ +. ....+.+ +..+..+||+++.+
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~-----~~-~~~~~~~-~~~g~~~vP~v~~~ 55 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINID-----EQ-PEAIDYV-KAQGFRQVPVIVAD 55 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECC-----CC-HHHHHHH-HHcCCcccCEEEEC
Confidence 57999999999999999999999999976654 22 2334445 34578899999884
No 78
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.46 E-value=9.3e-07 Score=71.30 Aligned_cols=78 Identities=17% Similarity=0.248 Sum_probs=59.3
Q ss_pred CCCcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHH
Q 019273 131 SPTRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVN 210 (343)
Q Consensus 131 ~~~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~ 210 (343)
...++++|+.++||||++++.+|+.+|++|+.+.||.. +.+ ....+.+.++++..+||++..+ |..+....++..
T Consensus 6 ~~~~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~--~~~-~~~~~~l~~~tg~~tvP~Vfi~--g~~iGG~ddl~~ 80 (99)
T TIGR02189 6 SEKAVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKE--PAG-KDIENALSRLGCSPAVPAVFVG--GKLVGGLENVMA 80 (99)
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCC--ccH-HHHHHHHHHhcCCCCcCeEEEC--CEEEcCHHHHHH
Confidence 34579999999999999999999999999998777632 111 1122344467889999999875 788888877777
Q ss_pred HHh
Q 019273 211 YLF 213 (343)
Q Consensus 211 YL~ 213 (343)
...
T Consensus 81 l~~ 83 (99)
T TIGR02189 81 LHI 83 (99)
T ss_pred HHH
Confidence 543
No 79
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.45 E-value=7.4e-07 Score=68.15 Aligned_cols=72 Identities=14% Similarity=0.284 Sum_probs=56.9
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhh
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQ 214 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~ 214 (343)
++||+.++||+|.+++.+|+++|++|+.+.++. ......++ .+.++..+||+++.+ |..+....++..+-.+
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~-----~~~~~~~~-~~~~g~~~vP~i~i~--g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDG-----DPALRDEM-MQRSGRRTVPQIFIG--DVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecC-----CHHHHHHH-HHHhCCCCcCEEEEC--CEEEcChHHHHHHHHc
Confidence 579999999999999999999999999776652 22233344 477788999999885 7888888888777654
No 80
>PHA03050 glutaredoxin; Provisional
Probab=98.44 E-value=1.1e-06 Score=72.19 Aligned_cols=74 Identities=19% Similarity=0.386 Sum_probs=57.7
Q ss_pred CcEEEEEeCCChhHHHHHHHHHHcCC---CeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHH
Q 019273 133 TRLQLFEFEACPFCRRVREAITELDL---SVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIV 209 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~elgl---~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~ 209 (343)
..+++|..++||||.+++-+|+++++ +|+.+.++-. ..+...++.+.++++..+||.++.+ |..+....++.
T Consensus 13 ~~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~---~~~~~~~~~l~~~tG~~tVP~IfI~--g~~iGG~ddl~ 87 (108)
T PHA03050 13 NKVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEF---KPENELRDYFEQITGGRTVPRIFFG--KTSIGGYSDLL 87 (108)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCC---CCCHHHHHHHHHHcCCCCcCEEEEC--CEEEeChHHHH
Confidence 46999999999999999999999999 7887666521 1122335566688999999999885 78887777776
Q ss_pred HH
Q 019273 210 NY 211 (343)
Q Consensus 210 ~Y 211 (343)
..
T Consensus 88 ~l 89 (108)
T PHA03050 88 EI 89 (108)
T ss_pred HH
Confidence 63
No 81
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.41 E-value=8.9e-07 Score=67.45 Aligned_cols=58 Identities=17% Similarity=0.248 Sum_probs=48.3
Q ss_pred CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhh
Q 019273 142 ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQ 215 (343)
Q Consensus 142 ~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~ 215 (343)
.+|+|.++...|+..|++|+++... . ...+|.|++|+|+++ |+.+.+|..|++||.++
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~~~~-------n-------~~~sp~gkLP~l~~~--~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVVPSN-------N-------PWRSPTGKLPALLTS--GTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEecC-------C-------CCCCCCCccCEEEEC--CEEecChHHHHHHHHHc
Confidence 5799999999999999999954211 1 145689999999985 89999999999999874
No 82
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.36 E-value=8.4e-07 Score=64.39 Aligned_cols=59 Identities=20% Similarity=0.420 Sum_probs=47.4
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS 201 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~ 201 (343)
++||+.++||+|.+++.+|+++|++|+.+.|+. . ....+.+.+..+..++|+++.+ |..
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~-----~-~~~~~~l~~~~g~~~~P~v~i~--g~~ 59 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDE-----D-EEAREELKELSGVRTVPQVFID--GKF 59 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGG-----S-HHHHHHHHHHHSSSSSSEEEET--TEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEccccc-----c-hhHHHHHHHHcCCCccCEEEEC--CEE
Confidence 579999999999999999999999999777663 2 2344555577789999999874 654
No 83
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=98.33 E-value=3e-06 Score=68.09 Aligned_cols=75 Identities=12% Similarity=0.156 Sum_probs=57.7
Q ss_pred CCCcEEEEEe-----CCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCH
Q 019273 131 SPTRLQLFEF-----EACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYES 205 (343)
Q Consensus 131 ~~~~l~LY~~-----~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES 205 (343)
.++++.||.. ++||||.+++.+|.++|++|+.+.|+ +. ....+.+.++++..+||.+..+ |..+...
T Consensus 10 ~~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~-----~~-~~~~~~l~~~tg~~tvP~vfi~--g~~iGG~ 81 (97)
T TIGR00365 10 KENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVL-----ED-PEIRQGIKEYSNWPTIPQLYVK--GEFVGGC 81 (97)
T ss_pred ccCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECC-----CC-HHHHHHHHHHhCCCCCCEEEEC--CEEEeCh
Confidence 3457899976 88999999999999999999965543 22 3344556688889999999885 7877777
Q ss_pred HHHHHHHh
Q 019273 206 GDIVNYLF 213 (343)
Q Consensus 206 ~aI~~YL~ 213 (343)
.++.....
T Consensus 82 ddl~~l~~ 89 (97)
T TIGR00365 82 DIIMEMYQ 89 (97)
T ss_pred HHHHHHHH
Confidence 77776543
No 84
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=98.30 E-value=3.9e-06 Score=64.26 Aligned_cols=75 Identities=15% Similarity=0.378 Sum_probs=59.0
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCC--eEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHH
Q 019273 135 LQLFEFEACPFCRRVREAITELDLS--VEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYL 212 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~--ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL 212 (343)
+++|+.++||+|++++-+|++++++ |+.+.|+.. +......+++.+..+..+||.+..+ |..+..+.+++++.
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~---~~~~~~~~~l~~~~g~~~vP~v~i~--g~~igg~~~~~~~~ 75 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQL---SNGSEIQDYLEEITGQRTVPNIFIN--GKFIGGCSDLLALY 75 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCC---CChHHHHHHHHHHhCCCCCCeEEEC--CEEEcCHHHHHHHH
Confidence 4789999999999999999999999 887777642 1122233445577788899999874 88899999999887
Q ss_pred hh
Q 019273 213 FQ 214 (343)
Q Consensus 213 ~~ 214 (343)
.+
T Consensus 76 ~~ 77 (84)
T TIGR02180 76 KS 77 (84)
T ss_pred Hc
Confidence 65
No 85
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=98.24 E-value=7.2e-06 Score=64.77 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=58.3
Q ss_pred CCcEEEEEe-----CCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHH
Q 019273 132 PTRLQLFEF-----EACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESG 206 (343)
Q Consensus 132 ~~~l~LY~~-----~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~ 206 (343)
.+++.+|.. ++||||.+++.+|+++|++|+.+.++ .. ...++.+.+.++..+||+++.+ |..+....
T Consensus 7 ~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~-----~~-~~~~~~l~~~~g~~tvP~vfi~--g~~iGG~~ 78 (90)
T cd03028 7 ENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDIL-----ED-EEVRQGLKEYSNWPTFPQLYVN--GELVGGCD 78 (90)
T ss_pred cCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcC-----CC-HHHHHHHHHHhCCCCCCEEEEC--CEEEeCHH
Confidence 357899976 68999999999999999999977654 22 3344556688899999999884 88888888
Q ss_pred HHHHHHh
Q 019273 207 DIVNYLF 213 (343)
Q Consensus 207 aI~~YL~ 213 (343)
.+.++-.
T Consensus 79 ~l~~l~~ 85 (90)
T cd03028 79 IVKEMHE 85 (90)
T ss_pred HHHHHHH
Confidence 8877543
No 86
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=97.95 E-value=6.2e-06 Score=67.37 Aligned_cols=107 Identities=17% Similarity=0.055 Sum_probs=60.3
Q ss_pred CCCCHHHHHHHHhhhhHHHhhccchh--hhhhcCCCCCcch----hhhhccCCChHHHHHHHHHHHhcc-----Cccccc
Q 019273 222 PSTGLLESTLITGWMPTIFRAGRGMT--LWEKARPDPPSKK----LELFSYENNPYARIVREALCELEL-----PYILQN 290 (343)
Q Consensus 222 ~p~~~~era~v~~Wl~~~~~~~~g~~--~~~~~~~~~p~~~----l~l~~~~~~p~~~~Vr~~L~~Le~-----pyL~~~ 290 (343)
||.++.+|+++.+|+.+....+.... .........+..+ ...-. ........+.+.|..||. +|+
T Consensus 1 ~~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~le~~L~~~~~l--- 76 (119)
T cd03189 1 PPPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKV-LAGFINPELKKHLDFLEDRLAKKGYF--- 76 (119)
T ss_pred CCCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHH-HHHHHhHHHHHHHHHHHHHHccCCCC---
Confidence 35688899999999998777665211 0000011110000 00000 000011235566666654 999
Q ss_pred ccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 291 VGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 291 vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+||++| +|||+....+.++ ...+..+.++|+|.+|++++.++
T Consensus 77 ~Gd~~t----~ADi~l~~~~~~~--~~~~~~~~~~p~l~~w~~~~~~~ 118 (119)
T cd03189 77 VGDKLT----AADIMMSFPLEAA--LARGPLLEKYPNIAAYLERIEAR 118 (119)
T ss_pred CCCCCC----HHHHHHHHHHHHH--HHcCcccccCchHHHHHHHHhcC
Confidence 999999 9999933222222 12233578899999999998764
No 87
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=97.93 E-value=9.2e-06 Score=64.95 Aligned_cols=90 Identities=17% Similarity=0.222 Sum_probs=57.7
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhc-----
Q 019273 209 VNYLFQQYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELE----- 283 (343)
Q Consensus 209 ~~YL~~~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le----- 283 (343)
++||.+. . .+.|.++.+.++++.|+++....+. . . + .+.+.+.+..+|
T Consensus 1 ~r~~~~~-~--~~~~~~~~~~~~vd~~~d~~~~~l~------~--~--------------~--~~~~~~~l~~le~~L~~ 53 (96)
T cd03200 1 ARFLYRL-L--GPAPNAPNAATNIDSWVDTAIFQLA------E--G--------------S--SKEKAAVLRALNSALGR 53 (96)
T ss_pred CchHHHH-h--cccCCCchHHHHHHHHHHHHHHHHh------c--C--------------C--HHHHHHHHHHHHHHHcC
Confidence 3688887 2 3456888899999999986432211 0 0 0 011223333332
Q ss_pred cCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhc
Q 019273 284 LPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 284 ~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~ 337 (343)
.+|+ +|+++| +|||+ +.+.+.. .+.....+|+|.+|++|+.+
T Consensus 54 ~~fl---~Gd~~t----iADi~---l~~~l~~--~~~~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 54 SPWL---VGSEFT----VADIV---SWCALLQ--TGLASAAPANVQRWLKSCEN 95 (96)
T ss_pred CCcc---CCCCCC----HHHHH---HHHHHHH--cccccccChHHHHHHHHHHh
Confidence 3999 999999 99999 4433321 23445689999999999865
No 88
>PRK10824 glutaredoxin-4; Provisional
Probab=97.89 E-value=7.4e-05 Score=61.99 Aligned_cols=74 Identities=12% Similarity=0.142 Sum_probs=58.8
Q ss_pred CCcEEEEEe-----CCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHH
Q 019273 132 PTRLQLFEF-----EACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESG 206 (343)
Q Consensus 132 ~~~l~LY~~-----~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~ 206 (343)
..++.+|.. +.||||+++..+|..+|++|..+.++- . ...++.+.++++..+||.+..+ |..+....
T Consensus 14 ~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~-----d-~~~~~~l~~~sg~~TVPQIFI~--G~~IGG~d 85 (115)
T PRK10824 14 ENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ-----N-PDIRAELPKYANWPTFPQLWVD--GELVGGCD 85 (115)
T ss_pred cCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC-----C-HHHHHHHHHHhCCCCCCeEEEC--CEEEcChH
Confidence 357889987 589999999999999999999766542 2 2345567688999999999874 88888888
Q ss_pred HHHHHHh
Q 019273 207 DIVNYLF 213 (343)
Q Consensus 207 aI~~YL~ 213 (343)
++.....
T Consensus 86 dl~~l~~ 92 (115)
T PRK10824 86 IVIEMYQ 92 (115)
T ss_pred HHHHHHH
Confidence 8877644
No 89
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.77 E-value=2.6e-05 Score=64.23 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=58.7
Q ss_pred CCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc-----CcccccccccCCcc
Q 019273 224 TGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELEL-----PYILQNVGDGSSRT 298 (343)
Q Consensus 224 ~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~-----pyL~~~vGd~~T~~ 298 (343)
.|+.+++++++|+.+....+................. .......+.+.|..||. +|+ +||++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~l~~le~~L~~~~yl---~Gd~~t-- 69 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEES-------EEEYRQQAEAFLKDLEARLQQHSYL---LGDKPS-- 69 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCccc-------HHHHHHHHHHHHHHHHHHHccCCcc---CCCCcc--
Confidence 3678899999999987765542211100000000000 01112245556655554 899 999999
Q ss_pred chhHhhhCCCeEeEEE--c--CCCCCCCCChHHHHHHHHHHhcC
Q 019273 299 KLLVDITGSKEVPYLI--D--PNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 299 ~~lADi~g~~~~p~L~--~--~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|||+ +++++. . ...+..+.++|+|.+|++++.++
T Consensus 70 --lADi~---l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~r 108 (115)
T cd03196 70 --LADWA---IFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLAS 108 (115)
T ss_pred --HHHHH---HHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcC
Confidence 99999 444432 1 11233468999999999999764
No 90
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.74 E-value=0.00019 Score=58.54 Aligned_cols=78 Identities=19% Similarity=0.392 Sum_probs=63.1
Q ss_pred CCCcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHH
Q 019273 131 SPTRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVN 210 (343)
Q Consensus 131 ~~~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~ 210 (343)
.+.++.+|+..+||+|++++.+|..+++.+.++++|-. +.+. .-++.+.++.+..+||.+..+ |..+....+|+.
T Consensus 12 ~~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~--~~g~-eiq~~l~~~tg~~tvP~vFI~--Gk~iGG~~dl~~ 86 (104)
T KOG1752|consen 12 SENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDED--EDGS-EIQKALKKLTGQRTVPNVFIG--GKFIGGASDLMA 86 (104)
T ss_pred hcCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCC--CCcH-HHHHHHHHhcCCCCCCEEEEC--CEEEcCHHHHHH
Confidence 44679999999999999999999999999999998864 2333 344556688889999999885 888888888877
Q ss_pred HHh
Q 019273 211 YLF 213 (343)
Q Consensus 211 YL~ 213 (343)
+-.
T Consensus 87 lh~ 89 (104)
T KOG1752|consen 87 LHK 89 (104)
T ss_pred HHH
Confidence 644
No 91
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=97.72 E-value=5.8e-05 Score=57.53 Aligned_cols=76 Identities=43% Similarity=0.798 Sum_probs=61.1
Q ss_pred hhhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 261 LELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 261 l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
+.+|.+..+|+|++++.+|.+++.+|-.+++..+..+.+++..+.+...+|.|.+...|..+.++..|.+|+++.|
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 4567777899999999999999999987777654434556777778889999986545677999999999999864
No 92
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=97.56 E-value=7.2e-05 Score=60.73 Aligned_cols=104 Identities=15% Similarity=0.105 Sum_probs=56.9
Q ss_pred CHHHHHHHHhhhhHHHhhccch-hhhhhcCC-CCC-cchhhhhccCCChHHHHHHHHHHHhcc-----CcccccccccCC
Q 019273 225 GLLESTLITGWMPTIFRAGRGM-TLWEKARP-DPP-SKKLELFSYENNPYARIVREALCELEL-----PYILQNVGDGSS 296 (343)
Q Consensus 225 ~~~era~v~~Wl~~~~~~~~g~-~~~~~~~~-~~p-~~~l~l~~~~~~p~~~~Vr~~L~~Le~-----pyL~~~vGd~~T 296 (343)
|+.+|+.+.+|+.+....+... ........ ..+ .................+.+.|..||. +|+ +||++|
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l---~gd~~t 77 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYV---AGDRFT 77 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcc---cCCCCC
Confidence 4678999999999876554421 10000000 000 000000000000111235556666544 899 999999
Q ss_pred ccchhHhhhCCCeEeEEE-cCCCCCCC-CChHHHHHHHHHHhcC
Q 019273 297 RTKLLVDITGSKEVPYLI-DPNTSTQI-GDYKKILSYLFQSYSA 338 (343)
Q Consensus 297 ~~~~lADi~g~~~~p~L~-~~~~g~~l-~e~p~I~awl~r~~~~ 338 (343)
+|||+ +++++. ....+.++ ..+|+|.+|++++.++
T Consensus 78 ----~aDi~---l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 114 (117)
T cd03182 78 ----IADIT---AFVGLDFAKVVKLRVPEELTHLRAWYDRMAAR 114 (117)
T ss_pred ----HHHHH---HHHHhHHHHhcCCCCccccHHHHHHHHHHHhc
Confidence 99999 444432 22234444 5899999999998764
No 93
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=97.49 E-value=6.8e-05 Score=60.33 Aligned_cols=54 Identities=24% Similarity=0.423 Sum_probs=38.0
Q ss_pred HHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 275 VREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 275 Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+.+.|..||. +|+ +||++| +|||+ .++.+. ....+.++.++|+|.+|++++.+.
T Consensus 48 ~~~~l~~le~~l~~~~~l---~G~~~t----~aDi~---~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 107 (114)
T cd03188 48 LAARLAYLDAQLAGGPYL---LGDRFS----VADAY---LFVVLRWAPGVGLDLSDWPNLAAYLARVAAR 107 (114)
T ss_pred HHHHHHHHHHHhcCCCee---eCCCcc----hHHHH---HHHHHHHHhhcCCChhhChHHHHHHHHHHhC
Confidence 4555555543 899 999999 99999 444332 222345567899999999998653
No 94
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.43 E-value=9.2e-05 Score=59.17 Aligned_cols=55 Identities=15% Similarity=0.102 Sum_probs=39.8
Q ss_pred HHHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 274 IVREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 274 ~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
.+.+.|..+|. +|+ +|+++| +|||+ +++++. ....+..+.++|+|.+|++++.++
T Consensus 47 ~~~~~l~~lE~~L~~~~~l---~g~~~t----~aDi~---~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 107 (110)
T cd03180 47 AWAKLMAILDAQLAGRPYL---AGDRFT----LADIP---LGCSAYRWFELPIERPPLPHLERWYARLRAR 107 (110)
T ss_pred HHHHHHHHHHHHhCCCCcc---cCCCCC----HHHHH---HHHHHHHHHHcccccccCchHHHHHHHHHhC
Confidence 45666666653 999 999999 99999 555432 112233468899999999999864
No 95
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=97.41 E-value=8.1e-05 Score=59.69 Aligned_cols=91 Identities=21% Similarity=0.241 Sum_probs=54.9
Q ss_pred HHHHHHHhhhhHHHhhccch-hhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhc-----cCcccccccccCCccch
Q 019273 227 LESTLITGWMPTIFRAGRGM-TLWEKARPDPPSKKLELFSYENNPYARIVREALCELE-----LPYILQNVGDGSSRTKL 300 (343)
Q Consensus 227 ~era~v~~Wl~~~~~~~~g~-~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le-----~pyL~~~vGd~~T~~~~ 300 (343)
.+|+++..|+.++...+... ..+.. . .+. .. ......+.+.|..|| .+|+ +||++|
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~--~-~~~-~~-------~~~~~~~~~~l~~le~~L~~~~~l---~G~~~t---- 63 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEK--G-RKK-EA-------EKARKELRESLLALAPVFAHKPYF---MSEEFS---- 63 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh--C-cHH-HH-------HHHHHHHHHHHHHHHHHHcCCCcc---cCCCCc----
Confidence 57899999999887655421 11111 0 010 00 001123444554444 3999 999999
Q ss_pred hHhhhCCCeEeEEE-cCCCCCCC-CChHHHHHHHHHHhcC
Q 019273 301 LVDITGSKEVPYLI-DPNTSTQI-GDYKKILSYLFQSYSA 338 (343)
Q Consensus 301 lADi~g~~~~p~L~-~~~~g~~l-~e~p~I~awl~r~~~~ 338 (343)
+|||+ ++|++. ....|.++ ..+|+|.+|++++.++
T Consensus 64 ~aDi~---~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~r 100 (107)
T cd03186 64 LVDCA---LAPLLWRLPALGIELPKQAKPLKDYMERVFAR 100 (107)
T ss_pred HHHHH---HHHHHHHHHHcCCCCcccchHHHHHHHHHHCC
Confidence 99999 555433 12245433 4799999999999764
No 96
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.35 E-value=0.00063 Score=68.35 Aligned_cols=69 Identities=12% Similarity=0.255 Sum_probs=49.3
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHh--------hCCCceeeEEEcCCCCeeecCH
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRR--------LGGKEQFPFLIDPNTGVSMYES 205 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~--------~np~~~VP~Lvd~n~g~~l~ES 205 (343)
.+++|+.++||+|++++.+|+.+|++|+.+.|+ +.. ...++..+ ..+..+||+++.+ |..+..-
T Consensus 3 ~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~-----~~~-~~~~~~~~~~~~~~~~~~g~~tvP~ifi~--~~~igGf 74 (410)
T PRK12759 3 EVRIYTKTNCPFCDLAKSWFGANDIPFTQISLD-----DDV-KRAEFYAEVNKNILLVEEHIRTVPQIFVG--DVHIGGY 74 (410)
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECC-----CCh-hHHHHHHHHhhccccccCCCCccCeEEEC--CEEEeCc
Confidence 589999999999999999999999999976665 221 12232222 2567899999875 5555555
Q ss_pred HHHHH
Q 019273 206 GDIVN 210 (343)
Q Consensus 206 ~aI~~ 210 (343)
.++..
T Consensus 75 ~~l~~ 79 (410)
T PRK12759 75 DNLMA 79 (410)
T ss_pred hHHHH
Confidence 44444
No 97
>PTZ00062 glutaredoxin; Provisional
Probab=97.34 E-value=0.0011 Score=60.47 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=55.8
Q ss_pred CcEEEEEe-----CCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHH
Q 019273 133 TRLQLFEF-----EACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGD 207 (343)
Q Consensus 133 ~~l~LY~~-----~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~a 207 (343)
+++.||.. +.||||+++..+|+++|++|+...|+ ++ ...++.+.+.++..+||.+..+ |..+.....
T Consensus 113 ~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~-----~d-~~~~~~l~~~sg~~TvPqVfI~--G~~IGG~d~ 184 (204)
T PTZ00062 113 HKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIF-----ED-PDLREELKVYSNWPTYPQLYVN--GELIGGHDI 184 (204)
T ss_pred CCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcC-----CC-HHHHHHHHHHhCCCCCCeEEEC--CEEEcChHH
Confidence 56889976 68999999999999999999965443 23 3345566688889999999874 787877777
Q ss_pred HHHHH
Q 019273 208 IVNYL 212 (343)
Q Consensus 208 I~~YL 212 (343)
+.+..
T Consensus 185 l~~l~ 189 (204)
T PTZ00062 185 IKELY 189 (204)
T ss_pred HHHHH
Confidence 76643
No 98
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=97.32 E-value=5.2e-05 Score=61.52 Aligned_cols=55 Identities=18% Similarity=0.310 Sum_probs=38.9
Q ss_pred HHHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE--c-CCCCCCCCChHHHHHHHHHHhcC
Q 019273 274 IVREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI--D-PNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 274 ~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~-~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
.+.+.|..||. +|+ +||++| +|||+ +++++. . ...+..+.++|+|.+|++++.++
T Consensus 49 ~~~~~l~~le~~L~~~~~l---~G~~~t----~aDi~---l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 111 (118)
T cd03187 49 KLKKVLDVYEARLSKSKYL---AGDSFT----LADLS---HLPYLQYLMATPFAKLFDSRPHVKAWWEDISAR 111 (118)
T ss_pred HHHHHHHHHHHHcccCccc---CCCCcc----HHHHH---HHHHHHHHHHccchhhhhcCchHHHHHHHHHhC
Confidence 35566666654 899 999999 99999 554432 1 11222356899999999998764
No 99
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.29 E-value=0.00014 Score=57.67 Aligned_cols=53 Identities=25% Similarity=0.308 Sum_probs=37.6
Q ss_pred HHHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHH
Q 019273 274 IVREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQS 335 (343)
Q Consensus 274 ~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~ 335 (343)
.+++.++.||. +|+ +||++| +|||+....+.++. ..+.++.++|+|.+|++++
T Consensus 47 ~~~~~l~~le~~L~~~~~l---~g~~~s----laDi~~~~~~~~~~--~~~~~~~~~p~l~~~~~~~ 104 (105)
T cd03179 47 RGHAALAVLEAHLAGRDFL---VGDALT----IADIALAAYTHVAD--EGGFDLADYPAIRAWLARI 104 (105)
T ss_pred HHHHHHHHHHHHHccCccc---cCCCCC----HHHHHHHHHHHhcc--ccCCChHhCccHHHHHHhh
Confidence 35556665653 899 999999 99999433333332 2345567899999999986
No 100
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=97.29 E-value=0.00012 Score=59.87 Aligned_cols=55 Identities=22% Similarity=0.300 Sum_probs=40.0
Q ss_pred HHHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE-cCC-CCCCCCChHHHHHHHHHHhcC
Q 019273 274 IVREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPN-TSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 274 ~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~-~g~~l~e~p~I~awl~r~~~~ 338 (343)
.+.+.|..||. +|+ +|+++| +||++ .++++. ... .++++.++|+|.+|++++.++
T Consensus 42 ~~~~~l~~le~~L~~~~~l---~G~~~s----~aDi~---l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 103 (118)
T cd03177 42 KLEEALDFLETFLEGSDYV---AGDQLT----IADLS---LVATVSTLEALLPLDLSKYPNVRAWLERLKAL 103 (118)
T ss_pred HHHHHHHHHHHHHccCCee---CCCCcC----HHHHH---HHHHHHHHHHhcCCChhhCchHHHHHHHHHcc
Confidence 45556665543 899 999999 99999 555442 112 455567899999999998764
No 101
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=97.26 E-value=7.2e-05 Score=61.37 Aligned_cols=44 Identities=20% Similarity=0.287 Sum_probs=33.9
Q ss_pred CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 285 PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|+ +||++| +|||+ +++++. ....++++..+|+|.+|++++.++
T Consensus 66 ~~l---~G~~~t----~ADi~---~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 110 (121)
T cd03191 66 KFC---FGDEPT----LADIC---LVPQVYNARRFGVDLSPYPTIARINEACLEL 110 (121)
T ss_pred Cee---cCCcCC----HHHHH---HHHHHHHHHHhCCCcccCcHHHHHHHHHHhC
Confidence 799 999999 99999 555433 222355568899999999999753
No 102
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.21 E-value=0.0018 Score=55.98 Aligned_cols=70 Identities=17% Similarity=0.218 Sum_probs=52.1
Q ss_pred EEEEEeC------CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCC----ceeeEEEcCCCCeeecC
Q 019273 135 LQLFEFE------ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGK----EQFPFLIDPNTGVSMYE 204 (343)
Q Consensus 135 l~LY~~~------~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~----~~VP~Lvd~n~g~~l~E 204 (343)
++||... .||+|++|+.+|+.++++|+.+.|+. .... .+.+.++.+. .+||.+..+ |..|..
T Consensus 2 VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~-----~~~~-~~EL~~~~g~~~~~~tvPqVFI~--G~~IGG 73 (147)
T cd03031 2 VVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSM-----DSGF-REELRELLGAELKAVSLPRVFVD--GRYLGG 73 (147)
T ss_pred EEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCC-----CHHH-HHHHHHHhCCCCCCCCCCEEEEC--CEEEec
Confidence 6899988 89999999999999999999665542 2222 3334455443 799999874 787877
Q ss_pred HHHHHHHH
Q 019273 205 SGDIVNYL 212 (343)
Q Consensus 205 S~aI~~YL 212 (343)
..++.+.-
T Consensus 74 ~del~~L~ 81 (147)
T cd03031 74 AEEVLRLN 81 (147)
T ss_pred HHHHHHHH
Confidence 77777643
No 103
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=97.17 E-value=0.00019 Score=57.86 Aligned_cols=54 Identities=19% Similarity=0.319 Sum_probs=37.4
Q ss_pred HHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCC-CCChHHHHHHHHHHhcC
Q 019273 275 VREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQ-IGDYKKILSYLFQSYSA 338 (343)
Q Consensus 275 Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~-l~e~p~I~awl~r~~~~ 338 (343)
+.+.|..+|. +|+ +||++| +|||+ +++++. ....+.. +.++|+|.+|++++.++
T Consensus 45 ~~~~l~~le~~L~~~~~l---~G~~~t----~aDi~---l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 105 (113)
T cd03178 45 AKRLYGVLDKRLAGRDYL---AGDEYS----IADIA---IFPWVRRLEWIGIDDLDDFPNVKRWLDRIAAR 105 (113)
T ss_pred HHHHHHHHHHHHccCCcc---cCCCCC----eeeee---HHHHHHHHHhccccchhhchHHHHHHHHHhhC
Confidence 4445555543 999 999999 99999 555443 1112232 56899999999998653
No 104
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=97.00 E-value=0.0021 Score=47.09 Aligned_cols=60 Identities=13% Similarity=0.318 Sum_probs=39.8
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCC---CeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeec
Q 019273 134 RLQLFEFEACPFCRRVREAITELDL---SVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMY 203 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl---~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ 203 (343)
.+++|..++||+|.+++.+|+++.. .++...+|+. + .++.. +..+...+|+++.+ |..++
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~---~----~~~l~-~~~~i~~vPti~i~--~~~~~ 64 (67)
T cd02973 2 NIEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDAA---E----FPDLA-DEYGVMSVPAIVIN--GKVEF 64 (67)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEcc---c----CHhHH-HHcCCcccCEEEEC--CEEEE
Confidence 4789999999999999999998722 1333344431 1 23333 45556789999874 66554
No 105
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=96.99 E-value=0.00022 Score=55.64 Aligned_cols=46 Identities=22% Similarity=0.393 Sum_probs=33.4
Q ss_pred ccCcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCC--CCChHHHHHHHHHHhcC
Q 019273 283 ELPYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQ--IGDYKKILSYLFQSYSA 338 (343)
Q Consensus 283 e~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~--l~e~p~I~awl~r~~~~ 338 (343)
+.+|+ +||++| +||++ +++.+. ....+.. ..++|+|.+|++++.++
T Consensus 46 ~~~~l---~G~~~t----~ADi~---~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~ 94 (95)
T PF00043_consen 46 GGPYL---VGDKLT----IADIA---LFPMLDWLERLGPDFLFEKFPKLKKWYERMFAR 94 (95)
T ss_dssp TSSSS---SBSS-C----HHHHH---HHHHHHHHHHHTTTTTHTTSHHHHHHHHHHHTS
T ss_pred CCCee---eccCCc----hhHHH---HHHHHHHHHHhCCCcccccCHHHHHHHHHHHcC
Confidence 34999 999999 99999 666654 1112222 38999999999998764
No 106
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=96.90 E-value=0.00051 Score=58.58 Aligned_cols=91 Identities=22% Similarity=0.248 Sum_probs=51.6
Q ss_pred HHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc-----CcccccccccCCccchhHh
Q 019273 229 STLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELEL-----PYILQNVGDGSSRTKLLVD 303 (343)
Q Consensus 229 ra~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lAD 303 (343)
|+++++|+++....+.... +..... ..... .......+.+.|+.||. +|+ +||++| +||
T Consensus 5 ~a~i~~~~~~~~~~~~~~~-~~~~~~-~~~~~-------~~~~~~~l~~~l~~LE~~L~~~~yl---~Gd~~T----lAD 68 (142)
T cd03190 5 RSEIDELNEWIYDNINNGV-YKAGFA-TTQEA-------YDEAVDELFEALDRLEELLSDRRYL---LGDRLT----EAD 68 (142)
T ss_pred HHHHHHHHHHHHHHHhhHH-HHHhhc-cCHHH-------HHHHHHHHHHHHHHHHHHHccCCee---eCCCcc----HHH
Confidence 7889999988766544211 111000 00000 00111234555555543 899 999999 999
Q ss_pred hhCCCeEeEEE-c-----CCC--C-CCCCChHHHHHHHHHHhcC
Q 019273 304 ITGSKEVPYLI-D-----PNT--S-TQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 304 i~g~~~~p~L~-~-----~~~--g-~~l~e~p~I~awl~r~~~~ 338 (343)
|+ +++++. . ... + ..+.++|+|.+|++++.++
T Consensus 69 i~---l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~ 109 (142)
T cd03190 69 IR---LFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQN 109 (142)
T ss_pred HH---HHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcC
Confidence 99 554432 0 111 1 1256899999999998763
No 107
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=96.76 E-value=0.00064 Score=55.84 Aligned_cols=94 Identities=15% Similarity=0.053 Sum_probs=53.5
Q ss_pred HHHHHHHhhhhHHHhhccch-hhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc-----CcccccccccCCccch
Q 019273 227 LESTLITGWMPTIFRAGRGM-TLWEKARPDPPSKKLELFSYENNPYARIVREALCELEL-----PYILQNVGDGSSRTKL 300 (343)
Q Consensus 227 ~era~v~~Wl~~~~~~~~g~-~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~ 300 (343)
.+|+++.+|+.+....+... ..... . .. .. .......+.+.|+.||. +|+ +|+++|
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~--~--~~-~~------~~~~~~~~~~~l~~le~~L~~~~~l---~G~~~t---- 63 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLA--A--KG-EE------REKAKEEALEALKVLEEELGGKPFF---GGDTIG---- 63 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHc--c--ch-HH------HHHHHHHHHHHHHHHHHHhcCCCCC---CCCCcc----
Confidence 46889999998876655421 11100 0 00 00 01112234555555543 999 999999
Q ss_pred hHhhhCCCeEeEEE--cCCCCC---CCCChHHHHHHHHHHhcC
Q 019273 301 LVDITGSKEVPYLI--DPNTST---QIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 301 lADi~g~~~~p~L~--~~~~g~---~l~e~p~I~awl~r~~~~ 338 (343)
+|||+....+.++. ....+. +..++|++.+|++++..+
T Consensus 64 ~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 106 (126)
T cd03185 64 YVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLEL 106 (126)
T ss_pred hHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhc
Confidence 99999322222221 111122 356799999999998763
No 108
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=96.75 E-value=0.0014 Score=54.19 Aligned_cols=44 Identities=23% Similarity=0.357 Sum_probs=33.3
Q ss_pred cCcccccccccCCccchhHhhhCCCeEeEEE--c----CCCCCCC-CChHHHHHHHHHHhcC
Q 019273 284 LPYILQNVGDGSSRTKLLVDITGSKEVPYLI--D----PNTSTQI-GDYKKILSYLFQSYSA 338 (343)
Q Consensus 284 ~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~----~~~g~~l-~e~p~I~awl~r~~~~ 338 (343)
.+|+ +| ++| +|||+ ++|++. . ...|+++ .++|+|.+|++++.++
T Consensus 52 ~~fl---~G-~~t----lADi~---l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~r 102 (120)
T cd03203 52 GPFF---LG-QFS----LVDIA---YVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKI 102 (120)
T ss_pred CCCc---CC-Ccc----HHHHH---HHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcc
Confidence 5999 99 999 99999 656542 1 1245554 5899999999999764
No 109
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=96.73 E-value=0.00061 Score=54.05 Aligned_cols=55 Identities=24% Similarity=0.430 Sum_probs=39.8
Q ss_pred HHHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 274 IVREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 274 ~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
.+++.|+.+|. +|+ +|+++| +|||+ +++++. ....+..+.++|+|.+|++++.++
T Consensus 37 ~~~~~l~~le~~L~~~~~l---~G~~~t----~aDi~---~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 97 (100)
T cd03206 37 RAHRLLRLLEEHLAGRDWL---AGDRPT----IADVA---VYPYVALAPEGGVDLEDYPAIRRWLARIEAL 97 (100)
T ss_pred HHHHHHHHHHHHHccCCcc---CCCCCC----HHHHH---HHHHHHHHhccCCChhhCcHHHHHHHHHHhC
Confidence 35555655543 999 999999 99998 555442 222344567899999999999764
No 110
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.73 E-value=0.0018 Score=53.16 Aligned_cols=32 Identities=19% Similarity=0.490 Sum_probs=29.0
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEee
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQ 166 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vd 166 (343)
++||+.++||+|++++-.|++.|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIV 32 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEeccc
Confidence 57999999999999999999999999966554
No 111
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=96.72 E-value=0.0012 Score=54.11 Aligned_cols=94 Identities=7% Similarity=-0.046 Sum_probs=53.1
Q ss_pred HHHHHHHhhhhHHHhhccchhhh-hhcCCCCCcchhhhhccCCC-hHHHHHHHHHH----Hh-cc-CcccccccccCCcc
Q 019273 227 LESTLITGWMPTIFRAGRGMTLW-EKARPDPPSKKLELFSYENN-PYARIVREALC----EL-EL-PYILQNVGDGSSRT 298 (343)
Q Consensus 227 ~era~v~~Wl~~~~~~~~g~~~~-~~~~~~~p~~~l~l~~~~~~-p~~~~Vr~~L~----~L-e~-pyL~~~vGd~~T~~ 298 (343)
.+|+++.+|+.++...++....+ .+......... . ... ...+.+++.+. .| +. +|+ +| ++|
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~le~~l~~~~~~l---~G-~fS-- 70 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKA-E----PLSEAAQAAAEKLIAVAEALLPPGAANL---FG-EWC-- 70 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCC-C----CCCHHHHHHHHHHHHHHHHHHhcCCCcc---cC-Ccc--
Confidence 56899999999988776632100 00000000000 0 000 11112333333 22 24 899 99 599
Q ss_pred chhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 299 KLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 299 ~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+||++ +++.+. ....|+++. |+|.+|++|+.++
T Consensus 71 --iAD~~---l~~~~~~~~~~g~~l~--p~l~ay~~r~~~r 104 (114)
T cd03195 71 --IADTD---LALMLNRLVLNGDPVP--ERLRDYARRQWQR 104 (114)
T ss_pred --HHHHH---HHHHHHHHHHcCCCCC--HHHHHHHHHHHCC
Confidence 99999 554433 445677774 9999999999865
No 112
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=96.66 E-value=0.00078 Score=55.53 Aligned_cols=44 Identities=18% Similarity=0.153 Sum_probs=32.1
Q ss_pred CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCC-----CCChHHHHHHHHHHhcC
Q 019273 285 PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQ-----IGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~-----l~e~p~I~awl~r~~~~ 338 (343)
+|+ +|+++| +|||+ +++++. ....+++ +.++|+|.+|++|+.++
T Consensus 59 ~yL---~Gd~~T----lADi~---l~~~l~~~~~~~~~~~~~~~~~~P~l~~w~~rv~aR 108 (111)
T cd03204 59 LWL---CGDTFT----LADIS---LGVTLHRLKFLGLSRRYWGNGKRPNLEAYFERVLQR 108 (111)
T ss_pred Ccc---CCCCCC----HHHHH---HHHHHHHHHHcCccccccccccChHHHHHHHHHHcC
Confidence 399 999999 99999 555432 1112333 35799999999999874
No 113
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=96.63 E-value=0.0011 Score=54.94 Aligned_cols=45 Identities=16% Similarity=0.285 Sum_probs=33.6
Q ss_pred cCcccccccccCCccchhHhhhCCCeEeEEE-----cCCC--CCCCCChHHHHHHHHHHhcC
Q 019273 284 LPYILQNVGDGSSRTKLLVDITGSKEVPYLI-----DPNT--STQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 284 ~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-----~~~~--g~~l~e~p~I~awl~r~~~~ 338 (343)
.+|+ +|+++| +|||+ .+|++. .... ...+.++|+|.+|++++.++
T Consensus 53 ~~yl---~G~~~t----~aDi~---~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~ 104 (124)
T cd03184 53 TPFF---GGDSPG----MVDYM---IWPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKED 104 (124)
T ss_pred CCCc---CCCCcc----HHHHH---hhHHHHHHHHHHhhccccCCcccChHHHHHHHHhccC
Confidence 5899 999999 99999 555542 1111 23468899999999998763
No 114
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.62 E-value=0.0028 Score=53.71 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=29.9
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEee
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQ 166 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vd 166 (343)
|++||+.+.||+|++++-.|++.|++|+.+.+.
T Consensus 1 mi~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 1 MVTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 589999999999999999999999999966553
No 115
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.60 E-value=0.005 Score=50.74 Aligned_cols=32 Identities=19% Similarity=0.421 Sum_probs=29.3
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEe
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYE 165 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~v 165 (343)
|++||+.+.|++|++++-.|++.|++|+.+.+
T Consensus 1 mi~iY~~~~C~~c~ka~~~L~~~gi~~~~idi 32 (115)
T cd03032 1 MIKLYTSPSCSSCRKAKQWLEEHQIPFEERNL 32 (115)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCceEEEec
Confidence 58999999999999999999999999996654
No 116
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=96.56 E-value=0.00062 Score=50.21 Aligned_cols=50 Identities=28% Similarity=0.448 Sum_probs=33.3
Q ss_pred HHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE---cCCCCC-CCCChHHHHHHHHH
Q 019273 275 VREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI---DPNTST-QIGDYKKILSYLFQ 334 (343)
Q Consensus 275 Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~---~~~~g~-~l~e~p~I~awl~r 334 (343)
+.+.|+.||. +|+ +|+++| +||++ ++|++. ....+. ....+|+|.+|++|
T Consensus 11 ~~~~l~~le~~L~~~~fl---~G~~~s----~aD~~---l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 11 LEAALDALEDHLADGPFL---FGDRPS----LADIA---LAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHTTSSBT---TBSS------HHHHH---HHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCC---CCCCCC----HHHHH---HHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 4455555543 899 999999 99999 667654 111111 24789999999986
No 117
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=96.55 E-value=0.00085 Score=57.17 Aligned_cols=45 Identities=24% Similarity=0.369 Sum_probs=35.2
Q ss_pred cCcccccccccCCccchhHhhhCCCeEeEEE-c-----CCCCCCC-CChHHHHHHHHHHhcC
Q 019273 284 LPYILQNVGDGSSRTKLLVDITGSKEVPYLI-D-----PNTSTQI-GDYKKILSYLFQSYSA 338 (343)
Q Consensus 284 ~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~-----~~~g~~l-~e~p~I~awl~r~~~~ 338 (343)
.+|+ +||++| +|||+ ++|++. . ...++.+ .++|+|.+|+++++++
T Consensus 64 ~~fL---~Gd~fT----lADi~---l~p~L~~~~~~~~~~~g~~i~~~~P~L~aw~~ri~aR 115 (134)
T cd03198 64 RKFL---DGDELT----LADCN---LLPKLHIVKVVAKKYRNFEIPADLTGLWRYLKNAYQR 115 (134)
T ss_pred CCCC---CCCCCC----HHHHH---HHHHHHHHHHHHHhhcCCCccccCHHHHHHHHHHHCC
Confidence 3699 999999 99999 777654 1 1125554 7899999999999875
No 118
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=96.51 E-value=0.0047 Score=47.07 Aligned_cols=75 Identities=28% Similarity=0.448 Sum_probs=56.8
Q ss_pred hhhccCCChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCC-CCCCCCChHHHHHHHHHHhc
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPN-TSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~-~g~~l~e~p~I~awl~r~~~ 337 (343)
.+|.+.. +++++++.+|.+++.+|-.+.+. +.-.+.+++.++.+...+|+|.+.. .|..+.++.+|.+|+++.++
T Consensus 3 ~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 3 TLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred EEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 4565554 88999999999999987654443 2223456788888888999998642 25678999999999999875
No 119
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.51 E-value=0.0035 Score=50.62 Aligned_cols=32 Identities=13% Similarity=0.278 Sum_probs=29.0
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEee
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQ 166 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vd 166 (343)
++||+.+.||+|++++..|++.|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 57999999999999999999999999976654
No 120
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=96.51 E-value=0.00095 Score=54.58 Aligned_cols=94 Identities=17% Similarity=0.147 Sum_probs=51.9
Q ss_pred HHHHHHhhhhHHHhhccch---hhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhcc-----CcccccccccCCccc
Q 019273 228 ESTLITGWMPTIFRAGRGM---TLWEKARPDPPSKKLELFSYENNPYARIVREALCELEL-----PYILQNVGDGSSRTK 299 (343)
Q Consensus 228 era~v~~Wl~~~~~~~~g~---~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~-----pyL~~~vGd~~T~~~ 299 (343)
+|+++.+|+.++...++.. .........+..... .......+.+.|+.||. +|+ +|+++|
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~le~~l~~~~~l---~G~~~s--- 68 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKS------VEAALEELDRVLGVLEERLLKRTYL---VGERLT--- 68 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHH------HHHHHHHHHHHHHHHHHHHccCcee---ccCCcc---
Confidence 3678899998876665521 111110000000000 00112235555555543 899 999999
Q ss_pred hhHhhhCCCeEeEEE-cCCCCCC---CCChHHHHHHHHHHhc
Q 019273 300 LLVDITGSKEVPYLI-DPNTSTQ---IGDYKKILSYLFQSYS 337 (343)
Q Consensus 300 ~lADi~g~~~~p~L~-~~~~g~~---l~e~p~I~awl~r~~~ 337 (343)
+|||+ +++++. ....+.+ +.++|+|.+|++++.+
T Consensus 69 -iaDi~---l~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 106 (123)
T cd03181 69 -LADIF---VAGALLLGFTYVFDKEWRAKYPNVTRWFNTVVN 106 (123)
T ss_pred -HHHHH---HHHHHHHHHHHHcCHHHHHhChHHHHHHHHHHc
Confidence 99999 554432 1001111 3579999999999865
No 121
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=96.48 E-value=0.0009 Score=53.11 Aligned_cols=41 Identities=22% Similarity=0.425 Sum_probs=29.6
Q ss_pred CcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCC-CChHHHHHHHHHHh
Q 019273 285 PYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQI-GDYKKILSYLFQSY 336 (343)
Q Consensus 285 pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l-~e~p~I~awl~r~~ 336 (343)
+|+ +|+++| +||++ ++++|...... .+ .++|+|.+|++|+.
T Consensus 57 ~~l---~G~~~T----~AD~~---v~~~l~~~~~~-~~~~~~p~L~~w~~ri~ 98 (99)
T PF14497_consen 57 DFL---VGDKPT----LADIA---VFGFLASLRWA-DFPKDYPNLVRWYERIE 98 (99)
T ss_dssp SSS---SSSS------HHHHH---HHHHHHHHHCC-HHTTTCHHHHHHHHHHH
T ss_pred eee---cCCCCC----HHHHH---HHHHHHHHhhc-ccccccHHHHHHHHhhc
Confidence 499 999999 99999 77766311122 33 48999999999985
No 122
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=96.44 E-value=0.0052 Score=46.32 Aligned_cols=72 Identities=28% Similarity=0.510 Sum_probs=57.8
Q ss_pred hccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 264 FSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 264 ~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
|.+..+|++++++.+|++.+.+|-.+++.... +++++.++.+...+|.|.++ |..+.++.+|.+|+++.|+.
T Consensus 2 y~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~-~~~~~~~~~p~~~vPvL~~~--g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 2 YGFPGSPYSQKVRLALEEKGIPYELVPVDPEE-KRPEFLKLNPKGKVPVLVDD--GEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp EEETTSHHHHHHHHHHHHHTEEEEEEEEBTTS-TSHHHHHHSTTSBSSEEEET--TEEEESHHHHHHHHHHHSTS
T ss_pred CCcCCChHHHHHHHHHHHcCCeEEEeccCccc-chhHHHhhcccccceEEEEC--CEEEeCHHHHHHHHHHHcCC
Confidence 45678999999999999999977766553221 35668888888899999844 66799999999999999875
No 123
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=96.34 E-value=0.0014 Score=54.56 Aligned_cols=54 Identities=13% Similarity=0.179 Sum_probs=38.3
Q ss_pred HHHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE--cCCCCCC-CCChHHHHHHHHHHhc
Q 019273 274 IVREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTSTQ-IGDYKKILSYLFQSYS 337 (343)
Q Consensus 274 ~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~~-l~e~p~I~awl~r~~~ 337 (343)
.+++.|..+|. +|+ +||++| +||++ .++++. ....+.+ +.++|+|.+|++|+.+
T Consensus 62 ~~~~~l~~l~~~L~~~~fl---~Gd~~t----~AD~~---l~~~l~~~~~~~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 62 NFRAALEPLRATLKGQPFL---GGAAPN----YADYI---VFGGFQWARIVSPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHcCCCcc---CCCCCc----hhHHH---HHHHHHHHHHcCcccccccCChHHHHHHHHhc
Confidence 35555655543 899 999999 99999 545433 2122344 5789999999999864
No 124
>PRK12559 transcriptional regulator Spx; Provisional
Probab=96.32 E-value=0.011 Score=50.15 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=30.3
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEee
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQ 166 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vd 166 (343)
|+++|+.+.|+.|++++..|++.|++|+.+.+.
T Consensus 1 mi~iY~~~~C~~crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 1 MVVLYTTASCASCRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCeEEEEee
Confidence 589999999999999999999999999977654
No 125
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=96.20 E-value=0.0018 Score=51.43 Aligned_cols=54 Identities=15% Similarity=0.289 Sum_probs=36.7
Q ss_pred HHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 275 VREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 275 Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+.+.++.||. +|+ +||++| +|||+....+.++. ..+. +.++|+|.+|++++.++
T Consensus 35 ~~~~l~~le~~l~~~~~l---~g~~~t----~aDi~~~~~~~~~~--~~~~-~~~~p~l~~w~~~~~~~ 93 (103)
T cd03207 35 YDDVLAALEQALAKGPYL---LGERFT----AADVLVGSPLGWGL--QFGL-LPERPAFDAYIARITDR 93 (103)
T ss_pred HHHHHHHHHHHHccCCcc---cCCccC----HHHHHHHHHHHHHH--HcCC-CCCChHHHHHHHHHHcC
Confidence 4555555543 999 999999 99999322222221 1232 57899999999998754
No 126
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=96.19 E-value=0.021 Score=43.41 Aligned_cols=57 Identities=23% Similarity=0.243 Sum_probs=46.3
Q ss_pred CChhHHHHHHHHHHcCCC---eEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 142 ACPFCRRVREAITELDLS---VEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 142 ~~P~~~rvr~~L~elgl~---ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
.+|-|..+.+.|+..+.+ ++++..+ . ..++|.+++|+|++. +++.+.+-..|++||.
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~-----n---------~~~Sptg~LP~L~~~-~~~~vsg~~~Iv~yL~ 72 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSN-----N---------PWLSPTGELPALIDS-GGTWVSGFRNIVEYLR 72 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcC-----C---------CCcCCCCCCCEEEEC-CCcEEECHHHHHHhhC
Confidence 478999999999999999 7754322 1 146899999999993 4888999999999983
No 127
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.16 E-value=0.012 Score=53.25 Aligned_cols=65 Identities=15% Similarity=0.157 Sum_probs=49.2
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHh
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLF 213 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~ 213 (343)
.+-|+.+. -|..|...|...+||+.++ -++.. || ++|.|+||.|..+ .+++.|-..|+.++.
T Consensus 28 QiLl~d~a---scLAVqtfLrMcnLPf~v~-----~~~Na-----ef---mSP~G~vPllr~g--~~~~aef~pIV~fVe 89 (257)
T KOG3027|consen 28 QILLPDNA---SCLAVQTFLRMCNLPFNVR-----QRANA-----EF---MSPGGKVPLLRIG--KTLFAEFEPIVDFVE 89 (257)
T ss_pred ccccccch---hHHHHHHHHHHcCCCceee-----ecCCc-----cc---cCCCCCCceeeec--chhhhhhhHHHHHHH
Confidence 35566554 4689999999999999943 22221 33 6899999999885 567999999999998
Q ss_pred hhc
Q 019273 214 QQY 216 (343)
Q Consensus 214 ~~y 216 (343)
.+-
T Consensus 90 ak~ 92 (257)
T KOG3027|consen 90 AKG 92 (257)
T ss_pred Hhc
Confidence 873
No 128
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=96.10 E-value=0.0024 Score=52.64 Aligned_cols=45 Identities=18% Similarity=0.306 Sum_probs=33.7
Q ss_pred cCcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCC-CCChHHHHHHHHHHhcC
Q 019273 284 LPYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQ-IGDYKKILSYLFQSYSA 338 (343)
Q Consensus 284 ~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~-l~e~p~I~awl~r~~~~ 338 (343)
.+|+ +||++| +|||+ +++++. ....+.+ +..+|+|.+|++++.+.
T Consensus 65 ~~~l---~Gd~~t----~ADi~---l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 111 (126)
T cd03183 65 KPFL---AGDEIS----IADLS---AVCEIMQPEAAGYDVFEGRPKLAAWRKRVKEA 111 (126)
T ss_pred CCcc---cCCCCC----HHHHH---HHHHHHHHHhcCCcccccCchHHHHHHHHHHh
Confidence 3899 999999 99998 544332 2223443 47899999999999874
No 129
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=96.10 E-value=0.0022 Score=49.63 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=35.0
Q ss_pred HHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE-cC--CCC-----CCCCChHHHHHHHHHH
Q 019273 275 VREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DP--NTS-----TQIGDYKKILSYLFQS 335 (343)
Q Consensus 275 Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~--~~g-----~~l~e~p~I~awl~r~ 335 (343)
+++.|+.+|. +|+ +||++| +|||+ +++++. .. ..+ ..+.++|+|.+|++++
T Consensus 24 ~~~~l~~le~~L~~~~yl---~Gd~~t----~aDi~---l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~ 87 (88)
T cd03193 24 AKKDLKALSDLLGDKKFF---FGDKPT----SLDAT---VFGHLASILYAPLPNSALQLILKEYPNLVEYCERI 87 (88)
T ss_pred HHHHHHHHHHHhCCCCcc---CCCCCC----HHHHH---HHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHh
Confidence 4555555543 899 999999 99999 555432 11 111 1256799999999986
No 130
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=96.06 E-value=0.014 Score=43.86 Aligned_cols=74 Identities=26% Similarity=0.335 Sum_probs=54.1
Q ss_pred hhhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCC--CCCCCCChHHHHHHHHHHhc
Q 019273 261 LELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPN--TSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 261 l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~--~g~~l~e~p~I~awl~r~~~ 337 (343)
+++|.+..+|+|++++..|.+++.+|-.+++.. . .++++ ...+...+|.+.+.. .|..+.++..|.+|+++..+
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~-~-~~~~~-~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~~ 77 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNP-V-SRKEI-KWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYLG 77 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCceEEEECCc-h-hHHHH-HHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHcC
Confidence 345667789999999999999999888655532 1 12234 335677899998442 35668999999999998753
No 131
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=96.05 E-value=0.0029 Score=52.59 Aligned_cols=45 Identities=24% Similarity=0.324 Sum_probs=32.8
Q ss_pred cCcccccccccCCccchhHhhhCCCeEeEEE------cCCCCCC-CCChHHHHHHHHHHhcC
Q 019273 284 LPYILQNVGDGSSRTKLLVDITGSKEVPYLI------DPNTSTQ-IGDYKKILSYLFQSYSA 338 (343)
Q Consensus 284 ~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~------~~~~g~~-l~e~p~I~awl~r~~~~ 338 (343)
.+|+ +||++| +|||+ +.|++. ....++. ..++|+|.+|++++.++
T Consensus 50 ~~fl---~Gd~~T----lADi~---l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~r 101 (121)
T cd03201 50 GPFI---NGEKIS----AVDLS---LAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSR 101 (121)
T ss_pred CCcc---CCCCCC----HHhHH---HHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCC
Confidence 4899 999999 99999 555321 1111333 37899999999999864
No 132
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=96.05 E-value=0.015 Score=49.31 Aligned_cols=33 Identities=12% Similarity=0.361 Sum_probs=29.9
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEee
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQ 166 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vd 166 (343)
|++||+.+.|+.|++++-.|++.|++|+.+.+.
T Consensus 1 Mi~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 1 MIKIYTISSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 589999999999999999999999999966554
No 133
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=95.98 E-value=0.0098 Score=44.19 Aligned_cols=70 Identities=24% Similarity=0.342 Sum_probs=53.6
Q ss_pred hhhccCCChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
++|.+..++++++++.+|.+++.+|-.+.+. ++-.+++++.++.+...+|.|.+. |..+.++.+|..|+.
T Consensus 2 ~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~--~~~l~es~aI~~yL~ 73 (74)
T cd03045 2 DLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDN--GFVLWESHAILIYLV 73 (74)
T ss_pred EEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEEC--CEEEEcHHHHHHHHh
Confidence 3556677899999999999999987655443 222345678888888899999854 566899999999986
No 134
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=95.93 E-value=0.01 Score=49.06 Aligned_cols=32 Identities=9% Similarity=0.394 Sum_probs=28.5
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEee
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQ 166 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vd 166 (343)
++||+.+.||+|++++-.|++.|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 47999999999999999999999999966543
No 135
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=95.88 E-value=0.0028 Score=54.94 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=39.1
Q ss_pred HHHHHHHhc--cCcccccccccCCccchhHhhhCCCeEeEEE--cCCCCC-CCCChHHHHHHHHHHhc
Q 019273 275 VREALCELE--LPYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTST-QIGDYKKILSYLFQSYS 337 (343)
Q Consensus 275 Vr~~L~~Le--~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~-~l~e~p~I~awl~r~~~ 337 (343)
+.+-.+.+. .+|+ +|+++| ||||+ +++++. ....++ ++.++|+|.+|++|+..
T Consensus 88 ~~~w~~~~~~~~~Fl---aGd~pt----IADis---vyg~l~s~e~~~~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 88 LNTWVAALGKDRQFH---GGSKPN----LADLA---VYGVLRSVEGHPAFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHhcCCCCcc---CCCCCC----HHHHH---HHHHHHHHHHhccccchhhCcCHHHHHHHHHH
Confidence 344444443 3899 999999 99999 777654 222255 78899999999999865
No 136
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=95.77 E-value=0.0067 Score=49.73 Aligned_cols=51 Identities=18% Similarity=0.206 Sum_probs=35.1
Q ss_pred HHHHHHHh-ccCcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 275 VREALCEL-ELPYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 275 Vr~~L~~L-e~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
++..+..+ +.+|+ +|| +| +||++ +++++. ....+.++ .|+|.+|++++.+.
T Consensus 53 le~~l~~~~~~~yl---~Gd-~T----~ADi~---l~~~~~~~~~~~~~~--~P~l~~~~~rv~~r 105 (114)
T cd03194 53 WAECLARFQGGPFL---FGD-FS----IADAF---FAPVVTRFRTYGLPL--SPAAQAYVDALLAH 105 (114)
T ss_pred HHHHHHHcCCCCCC---CCC-Cc----HHHHH---HHHHHHHHHHcCCCC--CHHHHHHHHHHHCC
Confidence 44445545 45899 999 99 99999 555443 22234443 39999999999763
No 137
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=95.63 E-value=0.0054 Score=50.42 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=31.6
Q ss_pred CcccccccccCCccchhHhhhCCCeEeEEE--cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 285 PYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 285 pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|+ +|+++| +||++ +++.+. .......+..+|+|.+|++++.++
T Consensus 55 ~~l---~G~~~T----~aDi~---l~~~~~~~~~~~~~~~~~~P~l~~~~~rv~~~ 100 (121)
T cd03209 55 PWF---AGDKIT----YVDFL---LYEALDQHRIFEPDCLDAFPNLKDFLERFEAL 100 (121)
T ss_pred CCc---CCCCcc----HHHHH---HHHHHHHHHHhCccccccChHHHHHHHHHHHC
Confidence 899 999999 99998 444332 111112367899999999998653
No 138
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=95.52 E-value=0.029 Score=41.39 Aligned_cols=71 Identities=23% Similarity=0.345 Sum_probs=54.0
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
+|....+|++++++.+|.+++.+|-.+++.-. .+.+++.++.+...+|.+.+. |..+.++.+|.+|+++.+
T Consensus 3 ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~-~~~~~~~~~~p~~~vP~l~~~--~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 3 LYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD-NPPEDLAELNPYGTVPTLVDR--DLVLYESRIIMEYLDERF 73 (73)
T ss_pred EEECCCChhHHHHHHHHHHcCCccEEEEcCCC-CCCHHHHhhCCCCCCCEEEEC--CEEEEcHHHHHHHHHhhC
Confidence 45556789999999999999998875554321 234567788888899988753 356899999999998764
No 139
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=95.52 E-value=0.032 Score=45.35 Aligned_cols=32 Identities=9% Similarity=0.314 Sum_probs=28.9
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEee
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQ 166 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vd 166 (343)
+++|+.+.|+.|++++..|++.|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 57999999999999999999999999966553
No 140
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=95.37 E-value=0.023 Score=42.82 Aligned_cols=69 Identities=23% Similarity=0.297 Sum_probs=52.2
Q ss_pred hhccCCChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
+|.+..++++++++-+|.+++.+|-.+.+. ..-.+.+++.++.+...+|.|.+ .|..+.|+..|..|++
T Consensus 3 ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~--~g~~l~Es~aI~~yLe 73 (73)
T cd03052 3 LYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIH--GDNIICDPTQIIDYLE 73 (73)
T ss_pred EecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEE--CCEEEEcHHHHHHHhC
Confidence 556667888889999999999977654432 22223456889999889999985 3566899999999985
No 141
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=95.35 E-value=0.038 Score=41.20 Aligned_cols=72 Identities=24% Similarity=0.378 Sum_probs=52.9
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCC-CeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGS-KEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~-~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
++|.+..+|++++++-.|.+++.+|-....... .+.+++..+.+. ..+|.+.+. |..+.++.+|.+|+++.+
T Consensus 2 ~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~-~~~~~~~~~~p~~~~vP~l~~~--~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 2 KLLGAWASPFVLRVRIALALKGVPYEYVEEDLG-NKSELLLASNPVHKKIPVLLHN--GKPICESLIIVEYIDEAW 74 (74)
T ss_pred EEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc-cCCHHHHHhCCCCCCCCEEEEC--CEEeehHHHHHHHHHhhC
Confidence 356667889999999999999988864443322 233456677664 689998863 556899999999998753
No 142
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=95.22 E-value=0.004 Score=48.06 Aligned_cols=51 Identities=29% Similarity=0.453 Sum_probs=34.8
Q ss_pred HHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEE-cCCCCCC---CCChHHHHHHHHHH
Q 019273 275 VREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTSTQ---IGDYKKILSYLFQS 335 (343)
Q Consensus 275 Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g~~---l~e~p~I~awl~r~ 335 (343)
+++.++.||. +|+ +|+++| +||++ .++++. ....+.. ...+|++.+|++++
T Consensus 41 ~~~~~~~l~~~L~~~~~~---~g~~~t----~aDi~---~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 41 LAAALAALEKLLAGRPYL---AGDRFS----LADIA---LAPVLARLDLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHccCCCC---CCCCcC----HHHHH---HHHHHHHHHHhhhhhhhhccCccHHHHHHhC
Confidence 4455555543 899 999999 99999 666553 1111222 46799999999874
No 143
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.06 E-value=0.034 Score=45.87 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=28.6
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEe
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYE 165 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~v 165 (343)
++||+.+.|+-|++++-.|++.|++|+.+.+
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~ 32 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVRDL 32 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEeeh
Confidence 7899999999999999999999999996554
No 144
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=95.03 E-value=0.17 Score=37.92 Aligned_cols=55 Identities=22% Similarity=0.451 Sum_probs=37.8
Q ss_pred cEEEEEeCCChhHHHHHHHHHH----cCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 134 RLQLFEFEACPFCRRVREAITE----LDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~e----lgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
.++||..++||+|..+.-.|++ .+..+.+..||.. ..++.. +..+...+|+++.+
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~-------~~~~~~-~~~~v~~vPt~~~~ 60 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVM-------ENPQKA-MEYGIMAVPAIVIN 60 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCc-------cCHHHH-HHcCCccCCEEEEC
Confidence 4789999999999999888765 3544666666641 122333 34556689999873
No 145
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=95.00 E-value=0.05 Score=40.46 Aligned_cols=65 Identities=35% Similarity=0.552 Sum_probs=49.4
Q ss_pred ChHHHHHHHHHHHhccCcccccc---cccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 269 NPYARIVREALCELELPYILQNV---GDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 269 ~p~~~~Vr~~L~~Le~pyL~~~v---Gd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
|||+++++-+|.+++.+|-...+ .+...+.+++.++.+...+|.|.++ .|..+.|+..|.+|+++
T Consensus 2 sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~-~g~vi~eS~~I~~yL~~ 69 (70)
T PF13409_consen 2 SPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDP-DGTVINESLAILEYLEE 69 (70)
T ss_dssp -HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEET-TTEEEESHHHHHHHHHH
T ss_pred chHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEEC-CCCEeeCHHHHHHHHhc
Confidence 78999999999999987764443 2333344679999999999999975 44568899999999986
No 146
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=94.89 E-value=0.016 Score=49.13 Aligned_cols=45 Identities=13% Similarity=0.264 Sum_probs=32.5
Q ss_pred cCcccccccccCCccchhHhhhCCCeEeEEE--cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 284 LPYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 284 ~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
.+|+ +|+++| +||++ +++.+. .......+.++|+|.+|++++.+.
T Consensus 60 ~~~l---~G~~~T----~ADi~---l~~~l~~~~~~~~~~l~~~P~l~~~~~rv~~~ 106 (137)
T cd03208 60 QDFL---VGNKLS----RADIH---LLEAILMVEELDPSLLSDFPLLQAFKTRISNL 106 (137)
T ss_pred CCee---eCCCCC----HHHHH---HHHHHHHHHHhchhhhccChHHHHHHHHHHcC
Confidence 4799 999999 99999 444332 111122367899999999998753
No 147
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=94.78 E-value=0.048 Score=40.02 Aligned_cols=71 Identities=27% Similarity=0.294 Sum_probs=51.6
Q ss_pred hhhccCCChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
++|.+..++++++++.+|.+++.+|-.+.+. +...+.+++..+.+...+|.+.... |..+.++.+|.+|++
T Consensus 2 ~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~-~~~l~es~aI~~yLe 74 (74)
T cd03051 2 KLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDD-GTVITESVAICRYLE 74 (74)
T ss_pred EEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCC-CCEEecHHHHHHHhC
Confidence 3566677899999999999999877544332 1222345677888888899987432 456899999999985
No 148
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=94.78 E-value=0.014 Score=48.32 Aligned_cols=45 Identities=16% Similarity=0.145 Sum_probs=32.6
Q ss_pred cCcccccccccCCccchhHhhhCCCeEeEEE--cCCCCCCCCChHHHHHHHHHHhcC
Q 019273 284 LPYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 284 ~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
.+|+ +|+++| +||++ +++.+. ....+..+.++|+|.+|++++.++
T Consensus 57 ~~~l---~G~~~T----~ADi~---l~~~~~~~~~~~~~~~~~~P~l~~~~~rv~~~ 103 (126)
T cd03210 57 KGFI---VGDKIS----FADYN---LFDLLDIHLVLAPGCLDAFPLLKAFVERLSAR 103 (126)
T ss_pred CCee---eCCCcc----HHHHH---HHHHHHHHHHhChHhhhcChHHHHHHHHHHhC
Confidence 3799 999999 99998 444332 111222367899999999998764
No 149
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=94.71 E-value=0.049 Score=40.01 Aligned_cols=69 Identities=28% Similarity=0.403 Sum_probs=51.5
Q ss_pred hhhccCCChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYL 332 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl 332 (343)
++|.+..++++++++.+|.+.+.+|-.+.+. +...+.+++.++.+...+|.+.+. |..+.++.+|.+|+
T Consensus 2 ~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~--~~~i~es~aI~~yl 72 (73)
T cd03056 2 KLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELD--GRVLAESNAILVYL 72 (73)
T ss_pred EEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEEC--CEEEEcHHHHHHHh
Confidence 3455667888999999999999877655443 222344567788887889999864 56689999999997
No 150
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=94.70 E-value=0.058 Score=40.21 Aligned_cols=71 Identities=21% Similarity=0.220 Sum_probs=53.4
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccc--cCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGD--GSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd--~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
++|.+..++++++++-+|.+++.+|-.+.+.. .-.+.+++.++.+...+|.+.+. |..+.++.+|.+|+++
T Consensus 3 ~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~--g~~l~es~aI~~yL~~ 75 (76)
T cd03053 3 KLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDG--DLKLFESRAITRYLAE 75 (76)
T ss_pred EEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEEC--CEEEEcHHHHHHHHhh
Confidence 45666678999999999999998776543331 11233568888888899998864 5568999999999975
No 151
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=94.59 E-value=0.15 Score=38.69 Aligned_cols=54 Identities=19% Similarity=0.358 Sum_probs=38.2
Q ss_pred EEEEEeCCChhHHHH----HHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeee
Q 019273 135 LQLFEFEACPFCRRV----REAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSM 202 (343)
Q Consensus 135 l~LY~~~~~P~~~rv----r~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l 202 (343)
+.+|. ++||+|..+ ..+++++|.+++++.||- .+...+ -+-..+|+|+. +|..+
T Consensus 3 i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~----------~~~a~~-~~v~~vPti~i--~G~~~ 60 (76)
T TIGR00412 3 IQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVTD----------MNEILE-AGVTATPGVAV--DGELV 60 (76)
T ss_pred EEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC----------HHHHHH-cCCCcCCEEEE--CCEEE
Confidence 67777 999999998 668888898888766651 112323 35679999987 36554
No 152
>PHA02125 thioredoxin-like protein
Probab=94.55 E-value=0.11 Score=39.21 Aligned_cols=52 Identities=17% Similarity=0.345 Sum_probs=37.3
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEc
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLID 195 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd 195 (343)
|+.+|+.++|+.|+++.-.|+. ++++...||. + ..++.. +...-..+|++++
T Consensus 1 ~iv~f~a~wC~~Ck~~~~~l~~--~~~~~~~vd~-----~--~~~~l~-~~~~v~~~PT~~~ 52 (75)
T PHA02125 1 MIYLFGAEWCANCKMVKPMLAN--VEYTYVDVDT-----D--EGVELT-AKHHIRSLPTLVN 52 (75)
T ss_pred CEEEEECCCCHhHHHHHHHHHH--HhheEEeeeC-----C--CCHHHH-HHcCCceeCeEEC
Confidence 5789999999999999988875 4566555553 1 133544 4555779999995
No 153
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=94.45 E-value=0.071 Score=40.01 Aligned_cols=60 Identities=20% Similarity=0.276 Sum_probs=47.1
Q ss_pred CChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhc
Q 019273 268 NNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 268 ~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~ 337 (343)
.+|++.+++..|.+.+.+|-...+ . ..++.+...+|.+.+. |..+.++..|.+|+++.|+
T Consensus 16 ~sp~~~~v~~~L~~~gi~~~~~~~----~----~~~~~p~g~vPvl~~~--g~~l~eS~~I~~yL~~~~~ 75 (75)
T cd03080 16 LSPFCLKVETFLRMAGIPYENKFG----G----LAKRSPKGKLPFIELN--GEKIADSELIIDHLEEKYG 75 (75)
T ss_pred CCHHHHHHHHHHHHCCCCcEEeec----C----cccCCCCCCCCEEEEC--CEEEcCHHHHHHHHHHHcC
Confidence 578999999999999998873332 2 3356677789998863 5668999999999999874
No 154
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=94.40 E-value=0.093 Score=38.82 Aligned_cols=68 Identities=24% Similarity=0.310 Sum_probs=51.6
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYL 332 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl 332 (343)
+|.+..+|++++++.+|.+++.+|-.+.+.-. .+.+++.++.+...+|.|.+. .|..+.|+..|.+|+
T Consensus 3 ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~-~~~~~~~~~np~~~vP~L~~~-~g~~l~eS~aI~~y~ 70 (71)
T cd03060 3 LYSFRRCPYAMRARMALLLAGITVELREVELK-NKPAEMLAASPKGTVPVLVLG-NGTVIEESLDIMRWA 70 (71)
T ss_pred EEecCCCcHHHHHHHHHHHcCCCcEEEEeCCC-CCCHHHHHHCCCCCCCEEEEC-CCcEEecHHHHHHhh
Confidence 45567899999999999999987764444321 234568888888899999753 255689999999986
No 155
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=94.25 E-value=0.12 Score=38.13 Aligned_cols=69 Identities=17% Similarity=0.319 Sum_probs=49.2
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
++|.+..+|++++++.+|.+.+.+|-.+.+.... ........+...+|.|.+.. |..+.++.+|.+|++
T Consensus 2 ~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~--~~~~~~~~~~~~vP~L~~~~-~~~l~es~aI~~yL~ 70 (71)
T cd03037 2 KLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD--EATPIRMIGAKQVPILEKDD-GSFMAESLDIVAFID 70 (71)
T ss_pred ceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc--hHHHHHhcCCCccCEEEeCC-CeEeehHHHHHHHHh
Confidence 3566778999999999999999988755444221 11133345666899987532 456899999999986
No 156
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=94.12 E-value=0.11 Score=38.87 Aligned_cols=72 Identities=21% Similarity=0.245 Sum_probs=52.6
Q ss_pred hhccCCChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
+|.+..+++++.+..+|.+++.+|-.+.+. +.-...+++.++.+...+|.|.+. |..+.++.+|.+|+++.|
T Consensus 3 ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~--~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 3 LYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDG--DFTLAESVAILRYLARKF 76 (76)
T ss_pred EeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEEC--CEEEEcHHHHHHHHHhhC
Confidence 455567888888999999999877644442 211223467788888899998753 456899999999998764
No 157
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=93.98 E-value=0.12 Score=46.56 Aligned_cols=76 Identities=24% Similarity=0.370 Sum_probs=60.5
Q ss_pred hhhhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 260 KLELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 260 ~l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
++++|.+..++++..++-+|.+++.+|-.+.+.-. .+.+++.++.+...+|.|.+. |..+.|+.+|..|+.+.++.
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~-~~~~~~~~~nP~g~VPvL~~~--g~~l~ES~AIl~YL~~~~~~ 85 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKD-NLPQDLIDLNPYQSVPTLVDR--ELTLYESRIIMEYLDERFPH 85 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcc-cCCHHHHHhCCCCCCCEEEEC--CEEeeCHHHHHHHHHHhCCC
Confidence 45678878899999999999999998875555321 233578889988899999853 56799999999999999864
No 158
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=93.97 E-value=0.11 Score=40.53 Aligned_cols=73 Identities=21% Similarity=0.250 Sum_probs=55.3
Q ss_pred chhhhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 259 KKLELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 259 ~~l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
..+++|.+..+|++++++.+|.+.+.+|-.+++...- ..+++..+.+...+|.|.+.. |..+.++..|.+|++
T Consensus 17 ~~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~-~~~~~~~~np~~~vPvL~~~~-g~~l~eS~aI~~yLe 89 (89)
T cd03055 17 GIIRLYSMRFCPYAQRARLVLAAKNIPHEVININLKD-KPDWFLEKNPQGKVPALEIDE-GKVVYESLIICEYLD 89 (89)
T ss_pred CcEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCC-CcHHHHhhCCCCCcCEEEECC-CCEEECHHHHHHhhC
Confidence 4567777888999999999999999988755554221 234577787778899988432 456899999999985
No 159
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=93.96 E-value=0.021 Score=45.18 Aligned_cols=42 Identities=19% Similarity=0.160 Sum_probs=30.7
Q ss_pred cCcccccccccCCccchhHhhhCCCeEeEEE-cCCCC-CC-CCChHHHHHHHHHH
Q 019273 284 LPYILQNVGDGSSRTKLLVDITGSKEVPYLI-DPNTS-TQ-IGDYKKILSYLFQS 335 (343)
Q Consensus 284 ~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~-~~~~g-~~-l~e~p~I~awl~r~ 335 (343)
.+|+ +|+++| +||++ +++++. ....+ .. +..+|+|.+|++++
T Consensus 60 ~~~~---~G~~~s----~aDi~---l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 60 GGYL---VGDKLT----WADLV---VFDVLDYLLYLDPKLLLKKYPKLKALRERV 104 (104)
T ss_pred CCee---eCCCcc----HHHHH---HHHHHHHHHhhCchhhHHhChhHHHHHHhC
Confidence 4899 999999 99999 555543 11222 22 56899999999874
No 160
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=93.91 E-value=0.081 Score=37.45 Aligned_cols=69 Identities=30% Similarity=0.394 Sum_probs=49.0
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
++.+..+|+|++++..|...+.+|-.+.+........++-.+.+...+|.+... |..+.++.+|.+|++
T Consensus 3 ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~--~~~~~es~~I~~yl~ 71 (71)
T cd00570 3 LYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPLGKVPVLEDG--GLVLTESLAILEYLA 71 (71)
T ss_pred EEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCCCCCCEEEEC--CEEEEcHHHHHHHhC
Confidence 455567899999999999999887755553221111124556677789998865 566889999999973
No 161
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=93.90 E-value=0.0088 Score=50.09 Aligned_cols=41 Identities=22% Similarity=0.434 Sum_probs=30.5
Q ss_pred CcccccccccCCccchhHhhhCCCeEeEEE---cC---CCCC--CCCChHHHHHHHHHH
Q 019273 285 PYILQNVGDGSSRTKLLVDITGSKEVPYLI---DP---NTST--QIGDYKKILSYLFQS 335 (343)
Q Consensus 285 pyL~~~vGd~~T~~~~lADi~g~~~~p~L~---~~---~~g~--~l~e~p~I~awl~r~ 335 (343)
+|+ +||++| .||++ .++++. .. ...+ .+.++|+|.+|.+|+
T Consensus 77 ~~l---~Gd~pT----~~Da~---vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri 125 (126)
T cd03211 77 PYF---FGDQPT----ELDAL---VFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRI 125 (126)
T ss_pred CCC---CCCCCc----HHHHH---HHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhc
Confidence 999 999999 99999 555532 11 1122 267899999999986
No 162
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=93.76 E-value=0.19 Score=41.79 Aligned_cols=32 Identities=13% Similarity=0.357 Sum_probs=29.6
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEe
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYE 165 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~v 165 (343)
+++||+.+.|.-|++++..|++.|++|+.+.+
T Consensus 2 ~itiy~~p~C~t~rka~~~L~~~gi~~~~~~y 33 (117)
T COG1393 2 MITIYGNPNCSTCRKALAWLEEHGIEYTFIDY 33 (117)
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCCCcEEEEe
Confidence 69999999999999999999999999996654
No 163
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=93.71 E-value=0.19 Score=33.83 Aligned_cols=57 Identities=26% Similarity=0.384 Sum_probs=35.2
Q ss_pred EEEEEeCCChhHHHHHHHHHHc---CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 135 LQLFEFEACPFCRRVREAITEL---DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~el---gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
+.+|...+|++|++++..+..+ +-.+.+..++.. .. ....+.. ...+...+|+++..
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~-~~~~~~~~P~~~~~ 60 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVD---ED-PALEKEL-KRYGVGGVPTLVVF 60 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcC---CC-hHHhhHH-HhCCCccccEEEEE
Confidence 3577888999999999999942 333444444431 11 1111222 45678899999764
No 164
>PRK10638 glutaredoxin 3; Provisional
Probab=93.51 E-value=0.12 Score=39.62 Aligned_cols=72 Identities=11% Similarity=0.295 Sum_probs=55.0
Q ss_pred hhhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 261 LELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 261 l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
+.+|....||+|+.++..|.+.+.+|-.+++.+....++++.++.+...+|.++.. |..+..+..|.+|.++
T Consensus 4 v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~~~vP~i~~~--g~~igG~~~~~~~~~~ 75 (83)
T PRK10638 4 VEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGRTTVPQIFID--AQHIGGCDDLYALDAR 75 (83)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEEC--CEEEeCHHHHHHHHHc
Confidence 44666678999999999999999999988886554445678888888899998632 3446677777777553
No 165
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.46 E-value=0.56 Score=45.15 Aligned_cols=87 Identities=11% Similarity=0.074 Sum_probs=59.2
Q ss_pred CChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHHhhhcCCCCC
Q 019273 142 ACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQYGKGRS 221 (343)
Q Consensus 142 ~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~y~~~~~ 221 (343)
.||-|..+.+.++..+-+.+++..+ . .-.+|.|++|+|+++ +|..+..-..|+.+|.+. .++..
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~~ss-----N---------~~~s~sg~LP~l~~~-ng~~va~~~~iv~~L~k~-~~ky~ 79 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVVVSS-----N---------PWRSPSGKLPYLITD-NGTKVAGPVKIVQFLKKN-TKKYN 79 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeEeec-----C---------CCCCCCCCCCeEEec-CCceeccHHHHHHHHHHh-cccCC
Confidence 4889999999999998665543222 1 125688999999997 578899999999999873 11111
Q ss_pred CCCC--HHHHHHHHhhhhHHHhhcc
Q 019273 222 PSTG--LLESTLITGWMPTIFRAGR 244 (343)
Q Consensus 222 ~p~~--~~era~v~~Wl~~~~~~~~ 244 (343)
...+ ..+++....|+..+...+.
T Consensus 80 ~d~dl~~kq~a~~~a~~sll~~~l~ 104 (313)
T KOG3028|consen 80 LDADLSAKQLADTLAFMSLLEENLE 104 (313)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHH
Confidence 1222 3446777777776655444
No 166
>PRK10853 putative reductase; Provisional
Probab=93.40 E-value=0.11 Score=43.21 Aligned_cols=32 Identities=9% Similarity=0.266 Sum_probs=28.9
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEe
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYE 165 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~v 165 (343)
|++||+.+.|.-|++++-.|++.|++|+.+.+
T Consensus 1 Mi~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~ 32 (118)
T PRK10853 1 MVTLYGIKNCDTIKKARRWLEAQGIDYRFHDY 32 (118)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHcCCCcEEeeh
Confidence 58999999999999999999999999995543
No 167
>PRK10387 glutaredoxin 2; Provisional
Probab=93.38 E-value=0.16 Score=45.37 Aligned_cols=72 Identities=19% Similarity=0.351 Sum_probs=53.6
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccc--cccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNV--GDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~v--Gd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
++|.+..+|++++++-+|.+++.+|-.+++ ++..+ ..++.+...+|.|... .|..+.|+..|..|+++.|+.
T Consensus 2 ~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~~~~----~~~~~p~~~VPvL~~~-~g~~l~eS~aI~~yL~~~~~~ 75 (210)
T PRK10387 2 KLYIYDHCPFCVKARMIFGLKNIPVELIVLANDDEAT----PIRMIGQKQVPILQKD-DGSYMPESLDIVHYIDELDGK 75 (210)
T ss_pred EEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCchhh----HHHhcCCcccceEEec-CCeEecCHHHHHHHHHHhCCC
Confidence 356667899999999999999998875544 33332 3455566689998522 356699999999999999864
No 168
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=93.34 E-value=0.022 Score=48.55 Aligned_cols=43 Identities=14% Similarity=0.258 Sum_probs=31.8
Q ss_pred CcccccccccCCccchhHhhhCCCeEeEEE---cCCCC-----CCCCChHHHHHHHHHHhc
Q 019273 285 PYILQNVGDGSSRTKLLVDITGSKEVPYLI---DPNTS-----TQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 285 pyL~~~vGd~~T~~~~lADi~g~~~~p~L~---~~~~g-----~~l~e~p~I~awl~r~~~ 337 (343)
+|+ +||++| ++|++ .++++. ....+ ..+..+|+|.+|++|+.+
T Consensus 84 ~~~---~Gd~~t----~~D~~---~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 84 QFF---FGDTPT----SLDAL---VFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred CcC---CCCCCc----HHHHH---HHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 999 999999 99999 555432 11121 236789999999999864
No 169
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=93.30 E-value=0.33 Score=37.28 Aligned_cols=53 Identities=21% Similarity=0.423 Sum_probs=38.8
Q ss_pred EEEEEeCCChhHHHHHHHHHHcC--CCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 135 LQLFEFEACPFCRRVREAITELD--LSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elg--l~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
++||+.++|+.|..+..+|+... .++++..||+. + .++...+.+ -.||||..+
T Consensus 2 l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~---~----d~~l~~~Y~--~~IPVl~~~ 56 (81)
T PF05768_consen 2 LTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDID---E----DPELFEKYG--YRIPVLHID 56 (81)
T ss_dssp EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETT---T----THHHHHHSC--TSTSEEEET
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECC---C----CHHHHHHhc--CCCCEEEEc
Confidence 78999999999999999999764 56778888762 1 234443444 489999875
No 170
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=93.22 E-value=0.14 Score=43.09 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=29.1
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEe
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYE 165 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~v 165 (343)
.++||+.+.|.=|++++-.|++.|++|+.+.+
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~ 33 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQDI 33 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEEec
Confidence 58999999999999999999999999996544
No 171
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=93.17 E-value=0.14 Score=37.94 Aligned_cols=68 Identities=25% Similarity=0.278 Sum_probs=50.6
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccC--CccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGS--SRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYL 332 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~--T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl 332 (343)
+|.+..++++++++-+|.+++.+|-.+.++... .+.+++.++.+...+|.|.+. +..+.++.+|.+|+
T Consensus 3 l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~--~~~l~eS~aI~~YL 72 (73)
T cd03047 3 IWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDG--DFVLWESNAILRYL 72 (73)
T ss_pred EEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEEC--CEEEECHHHHHHHh
Confidence 455567788888999999999988655443211 234567788888899999864 45689999999997
No 172
>PRK10026 arsenate reductase; Provisional
Probab=93.15 E-value=0.15 Score=43.79 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=29.5
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEe
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYE 165 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~v 165 (343)
+++||+++.|.=|++++..|++.|++|+.+.+
T Consensus 3 ~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~ 34 (141)
T PRK10026 3 NITIYHNPACGTSRNTLEMIRNSGTEPTIIHY 34 (141)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHCCCCcEEEee
Confidence 68999999999999999999999999996654
No 173
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=93.15 E-value=0.79 Score=36.40 Aligned_cols=68 Identities=9% Similarity=0.027 Sum_probs=45.6
Q ss_pred EEEEEeCCCh------hHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCC----CceeeEEEcCCCCeeecC
Q 019273 135 LQLFEFEACP------FCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGG----KEQFPFLIDPNTGVSMYE 204 (343)
Q Consensus 135 l~LY~~~~~P------~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np----~~~VP~Lvd~n~g~~l~E 204 (343)
++||....+. .|++|+.+|+.++|+|+.+.|+. +.. .++++.+..+ ..+||-+..+ +..+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~-----d~~-~r~em~~~~~~~~g~~tvPQIFi~--~~~iGg 73 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISM-----NEE-NRQWMRENVPNENGKPLPPQIFNG--DEYCGD 73 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCC-----CHH-HHHHHHHhcCCCCCCCCCCEEEEC--CEEeeC
Confidence 5677654332 67889999999999999776652 223 3344435543 5899988764 677777
Q ss_pred HHHHHH
Q 019273 205 SGDIVN 210 (343)
Q Consensus 205 S~aI~~ 210 (343)
..++..
T Consensus 74 ~ddl~~ 79 (92)
T cd03030 74 YEAFFE 79 (92)
T ss_pred HHHHHH
Confidence 766655
No 174
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=93.08 E-value=0.17 Score=37.87 Aligned_cols=71 Identities=17% Similarity=0.181 Sum_probs=52.4
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccc--cccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNV--GDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQS 335 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~v--Gd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~ 335 (343)
+|.+..++++++++-+|.+++.+|-.+.+ +++ .+.+++.++.+...+|.|..+. |..+.++.+|.+|+.++
T Consensus 3 Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~nP~~~vP~L~~~~-g~~l~es~aI~~yL~~~ 75 (75)
T cd03044 3 LYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKE-NKTPEFLKKFPLGKVPAFEGAD-GFCLFESNAIAYYVANL 75 (75)
T ss_pred EecCCCCccHHHHHHHHHHcCCceEEEecccccc-cCCHHHHHhCCCCCCCEEEcCC-CCEEeeHHHHHHHHhhC
Confidence 44556678888899999999887654433 222 2345688888888999998542 55689999999999763
No 175
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=93.00 E-value=0.08 Score=39.18 Aligned_cols=70 Identities=16% Similarity=0.096 Sum_probs=49.2
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
+|.+..++.+++++-+|.+++.+|-.+.+...-...+++.++.+...+|.|.+. |..+.++.+|.+|+.+
T Consensus 3 Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p~~~vP~L~~~--~~~l~es~aI~~yL~~ 72 (72)
T cd03039 3 LTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLPFGQLPVLEID--GKKLTQSNAILRYLAR 72 (72)
T ss_pred EEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCcCCCCCEEEEC--CEEEEecHHHHHHhhC
Confidence 344456677888999999999877655443211111236677788889999864 5668999999999864
No 176
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=92.91 E-value=0.15 Score=37.33 Aligned_cols=69 Identities=25% Similarity=0.234 Sum_probs=50.1
Q ss_pred hhccCCChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
+|.+..+++++.++.+|.+++.+|-.+.+. ++..+.+++.++.+...+|.+.+. +..+.++.+|.+|++
T Consensus 3 L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~--~~~l~es~aI~~yL~ 73 (73)
T cd03042 3 LYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVID--GLVLTQSLAIIEYLD 73 (73)
T ss_pred EecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEEC--CEEEEcHHHHHHHhC
Confidence 444556777888999999999877654443 122234567788888899998864 456899999999984
No 177
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=92.83 E-value=0.2 Score=36.98 Aligned_cols=70 Identities=27% Similarity=0.260 Sum_probs=51.0
Q ss_pred hhhccCCChHHHHHHHHHHH--hccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCE--LELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~--Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
++|.+..++++++++-+|.+ ++.+|-.+.+... .+.+++.++.+...+|.+..+ .|..+.++.+|.+|++
T Consensus 2 ~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~~vP~l~~~-~g~~l~es~aI~~yLe 73 (73)
T cd03049 2 KLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPW-SDDESLLAVNPLGKIPALVLD-DGEALFDSRVICEYLD 73 (73)
T ss_pred EEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcc-cCChHHHHhCCCCCCCEEEEC-CCCEEECHHHHHhhhC
Confidence 34556678999999999999 7777765555421 234557778888899998743 3566899999999985
No 178
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=92.81 E-value=0.11 Score=38.89 Aligned_cols=70 Identities=16% Similarity=0.088 Sum_probs=51.0
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
++|.+..++.++.++-+|.+++.+|-.+.+.-. ...+++.++.+...+|.+.+. |..+.++.+|.+|+.+
T Consensus 3 ~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~-~~~~~~~~~~p~~~vP~l~~~--~~~l~es~aI~~yL~~ 72 (73)
T cd03076 3 TLTYFPVRGRAEAIRLLLADQGISWEEERVTYE-EWQESLKPKMLFGQLPCFKDG--DLTLVQSNAILRHLGR 72 (73)
T ss_pred EEEEeCCcchHHHHHHHHHHcCCCCEEEEecHH-HhhhhhhccCCCCCCCEEEEC--CEEEEcHHHHHHHHhc
Confidence 455555677888999999999998875555311 122346677777789999863 4568999999999975
No 179
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=92.75 E-value=0.27 Score=36.74 Aligned_cols=64 Identities=25% Similarity=0.292 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 272 ARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 272 ~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
+++++.+|.+++.+|-.+.+. +.-.+.+++.++.+...+|.+.+.. |..+.++.+|.+|+++.+
T Consensus 11 ~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~-g~~l~eS~aI~~yL~~~~ 76 (77)
T cd03057 11 SLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDD-GEVLTESAAILQYLADLH 76 (77)
T ss_pred hHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECC-CcEEEcHHHHHHHHHHhC
Confidence 557888999988877644332 2223456788999888999987532 566899999999999876
No 180
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=92.58 E-value=0.37 Score=37.86 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=38.2
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc-----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeec
Q 019273 134 RLQLFEFEACPFCRRVREAITEL-----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMY 203 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el-----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ 203 (343)
.+.+|..++||+|..+..+++++ ++.++ .+|+ ...++.. +..+-..||.++.+ |..++
T Consensus 15 ~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~--~vd~-------~~~~e~a-~~~~V~~vPt~vid--G~~~~ 77 (89)
T cd03026 15 NFETYVSLSCHNCPDVVQALNLMAVLNPNIEHE--MIDG-------ALFQDEV-EERGIMSVPAIFLN--GELFG 77 (89)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHHCCCceEE--EEEh-------HhCHHHH-HHcCCccCCEEEEC--CEEEE
Confidence 58899999999999998888776 34444 3332 1123444 34446689999873 66544
No 181
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=92.53 E-value=0.033 Score=43.89 Aligned_cols=52 Identities=21% Similarity=0.200 Sum_probs=32.1
Q ss_pred HHHHHHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEEcCCCCCC-CCChHHHHHHHHHH
Q 019273 274 IVREALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQ-IGDYKKILSYLFQS 335 (343)
Q Consensus 274 ~Vr~~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~-l~e~p~I~awl~r~ 335 (343)
.+.+.|..+|. +| |++| +|||+....+.++.....+.. +.++|+|.+|++++
T Consensus 41 ~~~~~l~~le~~L~~~~~------d~~T----lADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 41 KIERALDALEAELAKLPL------DPLD----LADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHhhhhCCC------CCCC----HHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 35566666654 33 7899 999993222222211122333 57899999999875
No 182
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=92.50 E-value=0.27 Score=36.43 Aligned_cols=69 Identities=23% Similarity=0.368 Sum_probs=51.0
Q ss_pred hhhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHH
Q 019273 261 LELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYL 332 (343)
Q Consensus 261 l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl 332 (343)
+.+|....||+|..+++.|+.++.+|-.+++.+.. ...++..+.+...+|.++.. |..+..+..|.+|+
T Consensus 3 v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~-~~~~~~~~~g~~~vP~ifi~--g~~igg~~~l~~~l 71 (72)
T cd03029 3 VSLFTKPGCPFCARAKAALQENGISYEEIPLGKDI-TGRSLRAVTGAMTVPQVFID--GELIGGSDDLEKYF 71 (72)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCCh-hHHHHHHHhCCCCcCeEEEC--CEEEeCHHHHHHHh
Confidence 34556678999999999999999899877776544 23345556677789988732 33467889999987
No 183
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=92.29 E-value=0.39 Score=36.74 Aligned_cols=63 Identities=19% Similarity=0.315 Sum_probs=45.0
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCC----------cccHHHH-HhhCCCceeeEEEcCCCCeeec
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGS----------IRHREMV-RRLGGKEQFPFLIDPNTGVSMY 203 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~----------~~~~~~l-~~~np~~~VP~Lvd~n~g~~l~ 203 (343)
.+||+...||-|......|+.++++|+.+.|. ... ...++|- .+-|+.--+|+|..+ +|.++.
T Consensus 4 p~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt-----~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~-d~~vVl 77 (85)
T COG4545 4 PKLFGSNLCPDCAPAVEYLERLNVDYDFVEIT-----ESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTD-DGKVVL 77 (85)
T ss_pred ceeeccccCcchHHHHHHHHHcCCCceeeehh-----hhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeC-CCcEEE
Confidence 38999999999999999999999999987763 111 1122332 145777889999765 465543
No 184
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=92.21 E-value=0.46 Score=37.72 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=54.8
Q ss_pred CCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcCC
Q 019273 267 ENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSAS 339 (343)
Q Consensus 267 ~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~~ 339 (343)
..+||+++++-+|.+.+.+|-...+.-. .+.+.+.++.+...+|.|.+. +..+.++..|.+|+++.+...
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~-~~p~~~~~~nP~g~vPvL~~~--~~~i~eS~~I~eYLde~~~~~ 89 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMK-RKPEDLKDLAPGTQPPFLLYN--GEVKTDNNKIEEFLEETLCPP 89 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCC-CCCHHHHHhCCCCCCCEEEEC--CEEecCHHHHHHHHHHHccCC
Confidence 3689999999999999998864444321 123568899988899998863 567899999999999988754
No 185
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=92.02 E-value=0.32 Score=43.92 Aligned_cols=71 Identities=18% Similarity=0.316 Sum_probs=53.6
Q ss_pred hhccCCChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+|.+..+|+|++|+-.|.+++.+|-.+++. +..+ ..++.+...+|.+... .|..+.++..|.+|+++.|+.
T Consensus 2 Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~~~~~----~~~~np~g~vP~l~~~-~g~~l~es~~I~~yL~~~~~~ 74 (209)
T TIGR02182 2 LYIYDHCPFCVRARMIFGLKNIPVEKHVLLNDDEET----PIRMIGAKQVPILQKD-DGRAMPESLDIVAYFDKLDGE 74 (209)
T ss_pred eecCCCCChHHHHHHHHHHcCCCeEEEECCCCcchh----HHHhcCCCCcceEEee-CCeEeccHHHHHHHHHHhCCC
Confidence 455567999999999999999988755542 3223 4677777789998622 355689999999999999864
No 186
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=91.89 E-value=0.32 Score=36.98 Aligned_cols=71 Identities=20% Similarity=0.353 Sum_probs=54.4
Q ss_pred chhhhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHH
Q 019273 259 KKLELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYL 332 (343)
Q Consensus 259 ~~l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl 332 (343)
..+.+|....||+|+.+++.|+.++.+|-.+++.+... ..++..+.+...+|.++. .|..+..+..|.+|+
T Consensus 8 ~~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~~~-~~~~~~~~g~~~vP~i~i--~g~~igG~~~l~~~l 78 (79)
T TIGR02190 8 ESVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGNDAR-GRSLRAVTGATTVPQVFI--GGKLIGGSDELEAYL 78 (79)
T ss_pred CCEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCChH-HHHHHHHHCCCCcCeEEE--CCEEEcCHHHHHHHh
Confidence 34567777899999999999999999999888865533 234666667788998873 244578899999987
No 187
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=91.65 E-value=0.46 Score=42.62 Aligned_cols=76 Identities=29% Similarity=0.450 Sum_probs=57.1
Q ss_pred hhccCCChHHHHHHHHHHHhccCccccccccc-CCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcCC
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDG-SSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSAS 339 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~-~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~~ 339 (343)
++....+|++++++-.+.+++.+|-.+.+.-. ..+.+++..+.+...+|.|.++... .+.|+..|..|+++.|+..
T Consensus 3 L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~gkVPvL~~~~~~-~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 3 LYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPLGKVPALVDDDGE-VLTESGAILEYLAERYPGP 79 (211)
T ss_pred eecCCCCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCCCCCCEEeeCCCC-eeecHHHHHHHHHhhCCCC
Confidence 34444568999999999999876665444322 3455678888888899999865433 5899999999999999754
No 188
>PRK15113 glutathione S-transferase; Provisional
Probab=91.53 E-value=0.32 Score=43.96 Aligned_cols=77 Identities=23% Similarity=0.347 Sum_probs=57.9
Q ss_pred hhhhccC--CChHHHHHHHHHHHhccCcccccc--cccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 261 LELFSYE--NNPYARIVREALCELELPYILQNV--GDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 261 l~l~~~~--~~p~~~~Vr~~L~~Le~pyL~~~v--Gd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
++||... .++++++++-+|.+++.+|-.+.+ .++-.+.+++.++.+...+|.|.+. |..+.|+.+|.+|+++.+
T Consensus 6 ~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~--~~~l~ES~aI~~YL~~~~ 83 (214)
T PRK15113 6 ITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHD--DFELSESSAIAEYLEERF 83 (214)
T ss_pred EEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEEC--CEEEecHHHHHHHHHHHc
Confidence 4566543 588999999999999987754333 2222344678889998999999864 567899999999999998
Q ss_pred cCC
Q 019273 337 SAS 339 (343)
Q Consensus 337 ~~~ 339 (343)
+..
T Consensus 84 ~~~ 86 (214)
T PRK15113 84 APP 86 (214)
T ss_pred CCC
Confidence 743
No 189
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=91.37 E-value=0.32 Score=35.96 Aligned_cols=65 Identities=26% Similarity=0.314 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhccCcccccccc--cCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhc
Q 019273 271 YARIVREALCELELPYILQNVGD--GSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 271 ~~~~Vr~~L~~Le~pyL~~~vGd--~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~ 337 (343)
.+.+++-+|.+.+.+|-.+.+.- ...+.+++.++.+...+|.+.+. |..+.++.+|.+|+++.|+
T Consensus 10 ~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~--g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 10 RSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDG--DLVLTESAAIILYLAEKYG 76 (76)
T ss_pred ChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEEC--CEEEEcHHHHHHHHHHhCc
Confidence 45678888998888776444331 22345667888888899998753 5568999999999998763
No 190
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=91.31 E-value=0.31 Score=39.95 Aligned_cols=31 Identities=13% Similarity=0.235 Sum_probs=27.9
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEe
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYE 165 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~v 165 (343)
++||+.+.|.-|++++-.|++.|++|+.+.+
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di 31 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEY 31 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEec
Confidence 5799999999999999999999999995543
No 191
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=91.28 E-value=0.4 Score=42.76 Aligned_cols=71 Identities=20% Similarity=0.368 Sum_probs=53.3
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccc--cccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhc
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNV--GDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~v--Gd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~ 337 (343)
++|.|+.||||.++|-.+..++.|.-++-+ .|+-| =..+.|..++|.|.- ..|..|.|+-.|..|+++.++
T Consensus 2 kLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe~T----p~rmiG~KqVPiL~K-edg~~m~ESlDIV~y~d~~~~ 74 (215)
T COG2999 2 KLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDEET----PIRMIGQKQVPILQK-EDGRAMPESLDIVHYVDELDG 74 (215)
T ss_pred ceeEeccChHHHHHHHHhhccCCChhhheeccCcccC----hhhhhcccccceEEc-cccccchhhhHHHHHHHHhcC
Confidence 567889999999999999999986653333 35556 677889999999872 234557778788888877765
No 192
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=91.15 E-value=0.33 Score=39.95 Aligned_cols=31 Identities=10% Similarity=0.202 Sum_probs=28.1
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCeEEEEe
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSVEWMYE 165 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~ye~~~v 165 (343)
++||+.+.|+-|++++-.|++.|++|+.+.+
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di 31 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKY 31 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEec
Confidence 5799999999999999999999999996544
No 193
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=90.75 E-value=0.51 Score=42.06 Aligned_cols=74 Identities=24% Similarity=0.306 Sum_probs=55.8
Q ss_pred hhccCCChHHHHHHHHHHHhccCccccccc--c-cCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVG--D-GSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vG--d-~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
||.+..++++++++-+|.+++.+|-.+.+. + .-.+.+++.++.+...+|.|.+ .|..+.++.+|..|+.+.+..
T Consensus 2 Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~--~g~~l~ES~aI~~yl~~~~~~ 78 (210)
T TIGR01262 2 LYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDI--DGEVLTQSLAIIEYLEETYPD 78 (210)
T ss_pred cccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEE--CCEEeecHHHHHHHHHHhCCC
Confidence 455556788999999999999877654443 1 1112356888888889999986 356799999999999998864
No 194
>PRK11752 putative S-transferase; Provisional
Probab=90.29 E-value=0.48 Score=44.62 Aligned_cols=76 Identities=26% Similarity=0.385 Sum_probs=55.9
Q ss_pred chhhhhccCCChHHHHHHHHHHHh------ccCcccc--c--ccccCCccchhHhhhCCCeEeEEEcCC--CCCCCCChH
Q 019273 259 KKLELFSYENNPYARIVREALCEL------ELPYILQ--N--VGDGSSRTKLLVDITGSKEVPYLIDPN--TSTQIGDYK 326 (343)
Q Consensus 259 ~~l~l~~~~~~p~~~~Vr~~L~~L------e~pyL~~--~--vGd~~T~~~~lADi~g~~~~p~L~~~~--~g~~l~e~p 326 (343)
.++++|.. .++++++|+-+|.++ +.+|-.+ + .+++. .+++.++.+...+|.|++.. .++.+.|+.
T Consensus 43 ~~~~Ly~~-~s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~--~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~ 119 (264)
T PRK11752 43 HPLQLYSL-GTPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQF--SSGFVEINPNSKIPALLDRSGNPPIRVFESG 119 (264)
T ss_pred CCeEEecC-CCCchHHHHHHHHHHHhccCCCCceEEEEecCcccccc--CHHHHhhCCCCCCCEEEeCCCCCCeEEEcHH
Confidence 35677765 488999999999987 5555321 1 23333 46788999988999998543 246689999
Q ss_pred HHHHHHHHHhc
Q 019273 327 KILSYLFQSYS 337 (343)
Q Consensus 327 ~I~awl~r~~~ 337 (343)
.|..|+++.|+
T Consensus 120 AIl~YL~~~~~ 130 (264)
T PRK11752 120 AILLYLAEKFG 130 (264)
T ss_pred HHHHHHHHhcC
Confidence 99999999875
No 195
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=90.20 E-value=0.3 Score=36.35 Aligned_cols=68 Identities=26% Similarity=0.281 Sum_probs=50.5
Q ss_pred hhhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHH
Q 019273 261 LELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILS 330 (343)
Q Consensus 261 l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~a 330 (343)
+.+|....||+|+.+++.|++++.+|-.+++.++...++++.++.+...+|.++.. |..+..+..+.+
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~~~vP~v~i~--~~~iGg~~~~~~ 70 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGSSVVPQIFFN--EKLVGGLTDLKS 70 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCcCEEEEC--CEEEeCHHHHHh
Confidence 34566678999999999999999999988887766667778888888889988732 222445555443
No 196
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=90.15 E-value=0.68 Score=35.28 Aligned_cols=67 Identities=30% Similarity=0.295 Sum_probs=47.7
Q ss_pred CChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 268 NNPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 268 ~~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
.++++++++-+|.+++.+|-.+.+. +.-...+++ ++.+...+|.|.+. .|..+.++.+|.+|+++.|
T Consensus 15 ~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~-~~~~l~eS~aI~~yL~~~~ 83 (84)
T cd03038 15 FSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDG-SGEVIGDSFAIAEYLEEAY 83 (84)
T ss_pred cCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCceeCeEEEC-CCCEEeCHHHHHHHHHHhC
Confidence 5789999999999999877644332 111111223 55667789999864 2456899999999999876
No 197
>PLN02473 glutathione S-transferase
Probab=90.10 E-value=0.51 Score=42.29 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=55.3
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccc--cccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNV--GDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~v--Gd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+||....++++++++-+|.+++.+|-.+.+ .+.-.+.+++..+.+...+|.|.+. |..+.++-+|..|+++.++.
T Consensus 4 kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~--g~~l~ES~aI~~YL~~~~~~ 80 (214)
T PLN02473 4 KVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDG--DLKLFESRAIARYYATKYAD 80 (214)
T ss_pred EEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEEC--CEEEEehHHHHHHHHHHcCC
Confidence 456556678888999999999987754322 2222234567778888899999863 46689999999999999864
No 198
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=89.35 E-value=0.46 Score=34.27 Aligned_cols=69 Identities=17% Similarity=0.245 Sum_probs=47.1
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCC--CChHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQI--GDYKKILSYL 332 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l--~e~p~I~awl 332 (343)
.+|....|++|+.++..|...+.+|..+++.+.-...+++.+..+...+|.++.. |..+ .+...|.+|+
T Consensus 3 ~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~~~vP~~~~~--~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 3 KVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQRGVPVIVIG--HKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEcCCCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCCCcccEEEEC--CEEEeeCCHHHHHHHh
Confidence 3455567999999999999888888877776544333445666777789988743 2223 3456677765
No 199
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=89.14 E-value=2.3 Score=34.46 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=50.6
Q ss_pred CCCcEEEEE-----eCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCH
Q 019273 131 SPTRLQLFE-----FEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYES 205 (343)
Q Consensus 131 ~~~~l~LY~-----~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES 205 (343)
.+.++.||- +|.|.|+.++--+|...|. .+...||+. .+.+ -++-+++.+..-++|-|... |..+..|
T Consensus 13 ~~n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~-v~~~~vnVL---~d~e-iR~~lk~~s~WPT~PQLyi~--GEfvGG~ 85 (105)
T COG0278 13 KENPVVLFMKGTPEFPQCGFSAQAVQILSACGV-VDFAYVDVL---QDPE-IRQGLKEYSNWPTFPQLYVN--GEFVGGC 85 (105)
T ss_pred hcCceEEEecCCCCCCCCCccHHHHHHHHHcCC-cceeEEeec---cCHH-HHhccHhhcCCCCCceeeEC--CEEeccH
Confidence 345677774 5689999999999999994 333444442 2222 33445578889999999773 7777666
Q ss_pred HHHHHHH
Q 019273 206 GDIVNYL 212 (343)
Q Consensus 206 ~aI~~YL 212 (343)
.-|.+..
T Consensus 86 DIv~Em~ 92 (105)
T COG0278 86 DIVREMY 92 (105)
T ss_pred HHHHHHH
Confidence 6555543
No 200
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=87.73 E-value=1.2 Score=32.82 Aligned_cols=57 Identities=23% Similarity=0.272 Sum_probs=43.8
Q ss_pred CChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 268 NNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 268 ~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
.+|+|++++..|...+.+|-.+++... .+.+...+|.+.+. |..+.++.+|.+|+++
T Consensus 15 ~sp~~~~v~~~L~~~~i~~~~~~~~~~--------~~~p~g~vP~l~~~--g~~l~es~~I~~yL~~ 71 (72)
T cd03054 15 LSPECLKVETYLRMAGIPYEVVFSSNP--------WRSPTGKLPFLELN--GEKIADSEKIIEYLKK 71 (72)
T ss_pred CCHHHHHHHHHHHhCCCceEEEecCCc--------ccCCCcccCEEEEC--CEEEcCHHHHHHHHhh
Confidence 679999999999999999885554321 14455689998753 5568899999999986
No 201
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=87.63 E-value=1.7 Score=35.80 Aligned_cols=71 Identities=18% Similarity=0.434 Sum_probs=45.7
Q ss_pred ChhHHHHHHHHHHc---CCCeEEEEeeeecCCCCCcccHHHHHhhCC-CceeeEEEcCCC-----------C-eeecCHH
Q 019273 143 CPFCRRVREAITEL---DLSVEWMYEQVFPCPKGSIRHREMVRRLGG-KEQFPFLIDPNT-----------G-VSMYESG 206 (343)
Q Consensus 143 ~P~~~rvr~~L~el---gl~ye~~~vdl~~~~~~~~~~~~~l~~~np-~~~VP~Lvd~n~-----------g-~~l~ES~ 206 (343)
||.|..+.=+|..- .-..+++.|++ ++ -..+....+.. +...|+||-+++ | ..|.+..
T Consensus 24 Cp~c~~iEGlLa~~P~l~~~ldV~rV~f---~R---PR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~ 97 (112)
T PF11287_consen 24 CPHCAAIEGLLASFPDLRERLDVRRVDF---PR---PRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPR 97 (112)
T ss_pred CCchHHHHhHHhhChhhhhcccEEEeCC---CC---chHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHH
Confidence 99998888777653 22344445554 22 12233323343 567999986521 2 2599999
Q ss_pred HHHHHHhhhcCCC
Q 019273 207 DIVNYLFQQYGKG 219 (343)
Q Consensus 207 aI~~YL~~~y~~~ 219 (343)
.|+.||.++|+-+
T Consensus 98 ~I~~~La~r~g~p 110 (112)
T PF11287_consen 98 RILRYLAERHGFP 110 (112)
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999853
No 202
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=87.56 E-value=0.93 Score=34.02 Aligned_cols=69 Identities=12% Similarity=0.254 Sum_probs=50.0
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
+|....||+|..+++.|..++.+|-.+++......++++.++.+...+|.++.. |..+..+..+.+..+
T Consensus 3 ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~~~vP~i~i~--g~~igg~~~~~~~~~ 71 (79)
T TIGR02181 3 IYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGRRTVPQIFIG--DVHVGGCDDLYALDR 71 (79)
T ss_pred EEecCCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCCCCcCEEEEC--CEEEcChHHHHHHHH
Confidence 345568999999999999999999888877655556678888888889988732 223455555555443
No 203
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=87.25 E-value=0.79 Score=32.71 Aligned_cols=67 Identities=19% Similarity=0.350 Sum_probs=48.1
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSY 331 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~aw 331 (343)
+|....+|+|+.++..|..++.+|...++.+....++++..+.+...+|.++.. |..+..+..|.+.
T Consensus 4 ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~~~P~~~~~--~~~igg~~~~~~~ 70 (72)
T cd02066 4 VFSKSTCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGWPTVPQIFIN--GEFIGGYDDLKAL 70 (72)
T ss_pred EEECCCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCCCCcCEEEEC--CEEEecHHHHHHh
Confidence 455568999999999999999999877776554445667777787789988732 3335556555543
No 204
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=87.20 E-value=0.39 Score=40.10 Aligned_cols=35 Identities=29% Similarity=0.565 Sum_probs=17.0
Q ss_pred hCCCceeeEEEcCCCCeeecCHHHHHHHHhhhcCC
Q 019273 184 LGGKEQFPFLIDPNTGVSMYESGDIVNYLFQQYGK 218 (343)
Q Consensus 184 ~np~~~VP~Lvd~n~g~~l~ES~aI~~YL~~~y~~ 218 (343)
+|....-|-|.+..+|+.++|..||++||..-|..
T Consensus 30 v~ed~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~~ 64 (122)
T PF09635_consen 30 VNEDESGPLLKDKKSGFELFEPNAIVRYLANDFEG 64 (122)
T ss_dssp E-SS--S--EEE-S--S----HHHHHHHHTT--TT
T ss_pred eCCccccceeeecCCceEEecccHHHHHHHhhcCC
Confidence 34444558887777899999999999999988765
No 205
>PTZ00062 glutaredoxin; Provisional
Probab=86.64 E-value=10 Score=34.56 Aligned_cols=161 Identities=12% Similarity=0.089 Sum_probs=91.6
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCCe---EEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee-----ecCHH
Q 019273 135 LQLFEFEACPFCRRVREAITELDLSV---EWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS-----MYESG 206 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~y---e~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~-----l~ES~ 206 (343)
+..+..+|||-|+.+.-++.++--+| ....|| . + + . -..||.++-=.+|.. -.+-.
T Consensus 21 vl~f~a~w~~~C~~m~~vl~~l~~~~~~~~F~~V~-----~------d-~-~---V~~vPtfv~~~~g~~i~r~~G~~~~ 84 (204)
T PTZ00062 21 VLYVKSSKEPEYEQLMDVCNALVEDFPSLEFYVVN-----L------A-D-A---NNEYGVFEFYQNSQLINSLEGCNTS 84 (204)
T ss_pred EEEEeCCCCcchHHHHHHHHHHHHHCCCcEEEEEc-----c------c-c-C---cccceEEEEEECCEEEeeeeCCCHH
Confidence 33444688999999988888875543 333333 1 1 2 2 346786643223432 44678
Q ss_pred HHHHHHhhhcCCCCCCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHHHHHhccCc
Q 019273 207 DIVNYLFQQYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREALCELELPY 286 (343)
Q Consensus 207 aI~~YL~~~y~~~~~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~L~~Le~py 286 (343)
.+..+|.+.++... . ..+..++..+... +.+..+.+... ..+.||||+.+++.|.....+|
T Consensus 85 ~~~~~~~~~~~~~~----~----~~~~~~v~~li~~-~~Vvvf~Kg~~----------~~p~C~~C~~~k~~L~~~~i~y 145 (204)
T PTZ00062 85 TLVSFIRGWAQKGS----S----EDTVEKIERLIRN-HKILLFMKGSK----------TFPFCRFSNAVVNMLNSSGVKY 145 (204)
T ss_pred HHHHHHHHHcCCCC----H----HHHHHHHHHHHhc-CCEEEEEccCC----------CCCCChhHHHHHHHHHHcCCCE
Confidence 88899988766422 1 1233333322111 01111111000 1137999999999999998888
Q ss_pred ccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHH
Q 019273 287 ILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYL 332 (343)
Q Consensus 287 L~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl 332 (343)
...++-++-..++++....+...+|.++-. |..+..+..|.+..
T Consensus 146 ~~~DI~~d~~~~~~l~~~sg~~TvPqVfI~--G~~IGG~d~l~~l~ 189 (204)
T PTZ00062 146 ETYNIFEDPDLREELKVYSNWPTYPQLYVN--GELIGGHDIIKELY 189 (204)
T ss_pred EEEEcCCCHHHHHHHHHHhCCCCCCeEEEC--CEEEcChHHHHHHH
Confidence 877776554445556667777789987721 22244555555544
No 206
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=86.48 E-value=0.93 Score=32.58 Aligned_cols=69 Identities=16% Similarity=0.275 Sum_probs=42.8
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSY 331 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~aw 331 (343)
+|....|++|..++..|.+++.+|...++.......+++.++.+...+|.++....-+.-.+-..|.+|
T Consensus 4 l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~i~~~~~~i~g~~~~~l~~~ 72 (73)
T cd02976 4 VYTKPDCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGYRSVPVVVIGDEHLSGFRPDKLRAL 72 (73)
T ss_pred EEeCCCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCCcccCEEEECCEEEecCCHHHHHhh
Confidence 444567899999999999988888866665433323345555566789988743221111233455554
No 207
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=85.82 E-value=1.2 Score=41.10 Aligned_cols=72 Identities=29% Similarity=0.341 Sum_probs=57.1
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccc----cccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhc
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQ----NVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~----~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~ 337 (343)
.+|....++.++.+...+.+++.+|-.. ..|++.+ +++.++.+...+|.|.+. |..++++-+|..|+.+.|+
T Consensus 4 ~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~--pefl~~nP~~kVP~l~d~--~~~l~eS~AI~~Yl~~ky~ 79 (226)
T KOG0867|consen 4 KLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKS--PEFLKLNPLGKVPALEDG--GLTLWESHAILRYLAEKYG 79 (226)
T ss_pred eEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCC--HHHHhcCcCCCCCeEecC--CeEEeeHHHHHHHHHHHcC
Confidence 4555567777888888888888744332 1577766 888899999999999876 7779999999999999887
No 208
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=85.27 E-value=1.6 Score=33.72 Aligned_cols=73 Identities=12% Similarity=0.263 Sum_probs=51.4
Q ss_pred hhccCCChHHHHHHHHHHHhc-----cCcccccccccCCccchhHhhhCC--CeEeEEEcCCCCCCCCChHHHHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELE-----LPYILQNVGDGSSRTKLLVDITGS--KEVPYLIDPNTSTQIGDYKKILSYLFQS 335 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le-----~pyL~~~vGd~~T~~~~lADi~g~--~~~p~L~~~~~g~~l~e~p~I~awl~r~ 335 (343)
+|....||+|..+++.|+.+. .+|...++.+.-..++++.+..+. ..+|.++.. |..+..+..|.+|+++.
T Consensus 4 vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~~~tVP~ifi~--g~~igG~~dl~~~~~~~ 81 (86)
T TIGR02183 4 IFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKPVETVPQIFVD--EKHVGGCTDFEQLVKEN 81 (86)
T ss_pred EEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCCCCCcCeEEEC--CEEecCHHHHHHHHHhc
Confidence 455678999999999999984 367665654322224457777764 678988632 34478899999999886
Q ss_pred hc
Q 019273 336 YS 337 (343)
Q Consensus 336 ~~ 337 (343)
++
T Consensus 82 ~~ 83 (86)
T TIGR02183 82 FD 83 (86)
T ss_pred cc
Confidence 54
No 209
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=84.95 E-value=1.9 Score=32.93 Aligned_cols=74 Identities=18% Similarity=0.308 Sum_probs=51.7
Q ss_pred hhhccCCChHHHHHHHHHHHh-----ccCcccccccccCCccchhHhhhCC--CeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCEL-----ELPYILQNVGDGSSRTKLLVDITGS--KEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~L-----e~pyL~~~vGd~~T~~~~lADi~g~--~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
.+|....||+|+.+++.|++| +.+|...++.++-..++++..+.+. ..+|.++. .|..+..+..|.+|++.
T Consensus 4 ~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~~~~vP~ifi--~g~~igg~~~~~~~~~~ 81 (85)
T PRK11200 4 VIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKPVETVPQIFV--DQKHIGGCTDFEAYVKE 81 (85)
T ss_pred EEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCCCCcCCEEEE--CCEEEcCHHHHHHHHHH
Confidence 345557899999999999995 4477766665433224446555553 57898773 24447889999999998
Q ss_pred Hhc
Q 019273 335 SYS 337 (343)
Q Consensus 335 ~~~ 337 (343)
.++
T Consensus 82 ~~~ 84 (85)
T PRK11200 82 NLG 84 (85)
T ss_pred hcc
Confidence 765
No 210
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=84.87 E-value=1.4 Score=32.49 Aligned_cols=70 Identities=17% Similarity=0.310 Sum_probs=47.8
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCC-eEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSK-EVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~-~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
.+|....||+|..+++.|+.++.+|...++-+....++++.+..+.. .+|.++.. |..+..+..+.++.+
T Consensus 3 ~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~~~~vP~v~i~--g~~igg~~~~~~~~~ 73 (75)
T cd03418 3 EIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGGRRTVPQIFIG--DVHIGGCDDLYALER 73 (75)
T ss_pred EEEeCCCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCccCEEEEC--CEEEeChHHHHHHHh
Confidence 35566789999999999999999888777765433233455556655 79988732 233556667766654
No 211
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=84.83 E-value=2.6 Score=39.26 Aligned_cols=69 Identities=16% Similarity=0.220 Sum_probs=53.8
Q ss_pred CCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 267 ENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 267 ~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
..||++++|+.+|.+.+.+|-...+.- ..+.+++..+.+...+|.|.+ .|..+.++..|.+|++..|+.
T Consensus 17 ~~cp~~~rv~i~L~ekgi~~e~~~vd~-~~~~~~fl~inP~g~vPvL~~--~g~~l~ES~aI~eYL~e~~~~ 85 (236)
T TIGR00862 17 GNCPFSQRLFMILWLKGVVFNVTTVDL-KRKPEDLQNLAPGTHPPFLTY--NTEVKTDVNKIEEFLEETLCP 85 (236)
T ss_pred CCCHhHHHHHHHHHHcCCCcEEEEECC-CCCCHHHHHHCcCCCCCEEEE--CCEEeecHHHHHHHHHHHcCC
Confidence 578999999999999888665333321 123467889998889999986 356789999999999999864
No 212
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=84.76 E-value=3.2 Score=31.22 Aligned_cols=56 Identities=23% Similarity=0.408 Sum_probs=33.3
Q ss_pred EEEEEeCCChhHHHHHH----HHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecC
Q 019273 135 LQLFEFEACPFCRRVRE----AITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYE 204 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~----~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~E 204 (343)
+++ ..++||+|.++.. ++++.|+.++++.+ ...++ . ...+-..||+|+.+ |.+.+.
T Consensus 3 I~v-~~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~---------~~~~~-~-~~ygv~~vPalvIn--g~~~~~ 62 (76)
T PF13192_consen 3 IKV-FSPGCPYCPELVQLLKEAAEELGIEVEIIDI---------EDFEE-I-EKYGVMSVPALVIN--GKVVFV 62 (76)
T ss_dssp EEE-ECSSCTTHHHHHHHHHHHHHHTTEEEEEEET---------TTHHH-H-HHTT-SSSSEEEET--TEEEEE
T ss_pred EEE-eCCCCCCcHHHHHHHHHHHHhcCCeEEEEEc---------cCHHH-H-HHcCCCCCCEEEEC--CEEEEE
Confidence 567 4667999986665 55566766653221 11223 3 44557799999874 665443
No 213
>PLN02378 glutathione S-transferase DHAR1
Probab=84.75 E-value=2.2 Score=38.57 Aligned_cols=70 Identities=21% Similarity=0.308 Sum_probs=53.9
Q ss_pred cCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 266 YENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 266 ~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
+..||++++++-+|.+++.+|-.+.+.- ..+.+++.++.+...+|.|.+. |..+.|+..|..|+++.|+.
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~~v~~-~~~~~~~l~inP~G~VPvL~~~--~~~l~ES~aI~~YL~~~~~~ 86 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIHLINL-SDKPQWFLDISPQGKVPVLKID--DKWVTDSDVIVGILEEKYPD 86 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEEEeCc-ccCCHHHHHhCCCCCCCEEEEC--CEEecCHHHHHHHHHHhCCC
Confidence 3568999999999999998776444421 1233468889999999998753 34589999999999998864
No 214
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=84.03 E-value=1.5 Score=39.39 Aligned_cols=69 Identities=23% Similarity=0.329 Sum_probs=51.2
Q ss_pred ChHHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcC---CCC--CCCCChHHHHHHHHHHhc
Q 019273 269 NPYARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDP---NTS--TQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 269 ~p~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~---~~g--~~l~e~p~I~awl~r~~~ 337 (343)
++++++|+-+|.+++.+|-.+.+. ++-.+.+++.++.+...+|.|.+. ..| ..+.|+.+|..|++..++
T Consensus 9 ~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~ 84 (215)
T PRK13972 9 TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTG 84 (215)
T ss_pred CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcC
Confidence 567888999999999977644432 222234568889988899999853 234 358999999999999875
No 215
>PRK10357 putative glutathione S-transferase; Provisional
Probab=83.26 E-value=3 Score=36.91 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=52.3
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhc
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~ 337 (343)
+|.+..++++++++-+|.+++.+|-.+.+.. ..+.+++.++.+...+|.|+.. .|..+.++..|.+|+++.+.
T Consensus 3 Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~-~~~~~~~~~~nP~g~vP~L~~~-~g~~l~eS~aI~~yL~~~~~ 75 (202)
T PRK10357 3 LIGSYTSPFVRKISILLLEKGITFEFVNELP-YNADNGVAQYNPLGKVPALVTE-EGECWFDSPIIAEYIELLNV 75 (202)
T ss_pred eecCCCCchHHHHHHHHHHcCCCCeEEecCC-CCCchhhhhcCCccCCCeEEeC-CCCeeecHHHHHHHHHHhCC
Confidence 4555678899899999999999886433321 1122335567777899999732 35668999999999998764
No 216
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=82.86 E-value=1.4 Score=32.61 Aligned_cols=52 Identities=17% Similarity=0.342 Sum_probs=38.0
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEc
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLID 315 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~ 315 (343)
+|....||+|+.+++.|++.+.+|-.+++.++...++++.. .|...+|.++.
T Consensus 3 ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~-~g~~~vP~v~~ 54 (72)
T TIGR02194 3 VYSKNNCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKA-QGFRQVPVIVA 54 (72)
T ss_pred EEeCCCCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHH-cCCcccCEEEE
Confidence 45567899999999999999999988888765442222332 26678998873
No 217
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=82.20 E-value=1.1 Score=31.75 Aligned_cols=52 Identities=23% Similarity=0.474 Sum_probs=41.9
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEE
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLI 314 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~ 314 (343)
+|....+|+|..+++.|+..+.+|-.+++.+.-..++++.+..+...+|.++
T Consensus 3 vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~~~~P~v~ 54 (60)
T PF00462_consen 3 VYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGVRTVPQVF 54 (60)
T ss_dssp EEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSSSSSSEEE
T ss_pred EEEcCCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCCCccCEEE
Confidence 3445689999999999999999998888877655566777777777899876
No 218
>PTZ00057 glutathione s-transferase; Provisional
Probab=82.07 E-value=1.9 Score=38.60 Aligned_cols=76 Identities=20% Similarity=0.307 Sum_probs=53.4
Q ss_pred hhhhccCCChHHHHHHHHHHHhccCcccccccccCCc---cchhH--hhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHH
Q 019273 261 LELFSYENNPYARIVREALCELELPYILQNVGDGSSR---TKLLV--DITGSKEVPYLIDPNTSTQIGDYKKILSYLFQS 335 (343)
Q Consensus 261 l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~---~~~lA--Di~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~ 335 (343)
++++.+.....++.++-+|.+++.+|-.+..|++.+. .+++- .+.+...+|.|.+. |..+.++.+|.+|+.+.
T Consensus 5 ~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~~nP~g~vP~L~~~--~~~l~eS~AI~~YLa~~ 82 (205)
T PTZ00057 5 IVLYYFDARGKAELIRLIFAYLGIEYTDKRFGENGDAFIEFKNFKKEKDTPFEQVPILEMD--NIIFAQSQAIVRYLSKK 82 (205)
T ss_pred eEEEecCCCcchHHHHHHHHHcCCCeEEEeccccchHHHHHHhccccCCCCCCCCCEEEEC--CEEEecHHHHHHHHHHH
Confidence 3455444556677899999999999986666643220 00111 35677899999863 46799999999999999
Q ss_pred hcC
Q 019273 336 YSA 338 (343)
Q Consensus 336 ~~~ 338 (343)
++.
T Consensus 83 ~~~ 85 (205)
T PTZ00057 83 YKI 85 (205)
T ss_pred cCC
Confidence 864
No 219
>cd02955 SSP411 TRX domain, SSP411 protein family; members of this family are highly conserved proteins present in eukaryotes, bacteria and archaea, about 600-800 amino acids in length, which contain a TRX domain with a redox active CXXC motif. The human/rat protein, called SSP411, is specifically expressed in the testis in an age-dependent manner. The SSP411 mRNA is increased during spermiogenesis and is localized in round and elongated spermatids, suggesting a function in fertility regulation.
Probab=81.86 E-value=3.1 Score=34.82 Aligned_cols=69 Identities=12% Similarity=0.272 Sum_probs=40.2
Q ss_pred CcEEE-EEeCCChhHHHHH-------HHHHHcCCCeEEEEeeeecCCCCCcccH---HHHHhhCCCceeeEEE--cCCCC
Q 019273 133 TRLQL-FEFEACPFCRRVR-------EAITELDLSVEWMYEQVFPCPKGSIRHR---EMVRRLGGKEQFPFLI--DPNTG 199 (343)
Q Consensus 133 ~~l~L-Y~~~~~P~~~rvr-------~~L~elgl~ye~~~vdl~~~~~~~~~~~---~~l~~~np~~~VP~Lv--d~n~g 199 (343)
+++-| ++..+|++|++.. .+.+.++-.|..+.+|.. +..+... +......+..-+|+++ ++ +|
T Consensus 16 KpVll~f~a~WC~~Ck~me~~~f~~~~V~~~l~~~fv~VkvD~~---~~~~~~~~~~~~~~~~~~~~G~Pt~vfl~~-~G 91 (124)
T cd02955 16 KPIFLSIGYSTCHWCHVMEHESFEDEEVAAILNENFVPIKVDRE---ERPDVDKIYMNAAQAMTGQGGWPLNVFLTP-DL 91 (124)
T ss_pred CeEEEEEccCCCHhHHHHHHHccCCHHHHHHHhCCEEEEEEeCC---cCcHHHHHHHHHHHHhcCCCCCCEEEEECC-CC
Confidence 34444 5567999998763 344445557888888852 2111111 1121234566789884 44 68
Q ss_pred eeecCH
Q 019273 200 VSMYES 205 (343)
Q Consensus 200 ~~l~ES 205 (343)
..++.+
T Consensus 92 ~~~~~~ 97 (124)
T cd02955 92 KPFFGG 97 (124)
T ss_pred CEEeee
Confidence 888776
No 220
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=81.79 E-value=26 Score=31.70 Aligned_cols=172 Identities=16% Similarity=0.209 Sum_probs=82.9
Q ss_pred CcEEEEEe---CCChhHHHHHHHHHHcCCCe---EEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeec---
Q 019273 133 TRLQLFEF---EACPFCRRVREAITELDLSV---EWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMY--- 203 (343)
Q Consensus 133 ~~l~LY~~---~~~P~~~rvr~~L~elgl~y---e~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~--- 203 (343)
..+.+|.. +|||.|+.+.-+++++.-.| ++..+++ .. ...++.. +...-..+|+++--++|..+.
T Consensus 21 ~~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~v---d~--~~~~~l~-~~~~V~~~Pt~~~f~~g~~~~~~~ 94 (215)
T TIGR02187 21 VEIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDF---DT--PEDKEEA-EKYGVERVPTTIILEEGKDGGIRY 94 (215)
T ss_pred eEEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEec---CC--cccHHHH-HHcCCCccCEEEEEeCCeeeEEEE
Confidence 35778877 89999999988888774333 2223332 11 1233444 444577899986422343211
Q ss_pred -C---HHHHHHHHhhhcCCCCC-CCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHHH
Q 019273 204 -E---SGDIVNYLFQQYGKGRS-PSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVREA 278 (343)
Q Consensus 204 -E---S~aI~~YL~~~y~~~~~-~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~~ 278 (343)
. -..+..+|...+.-... ...+...+..+.. ...|.. +.++.-..|++|..+...
T Consensus 95 ~G~~~~~~l~~~i~~~~~~~~~~~~L~~~~~~~l~~-------------------~~~pv~-I~~F~a~~C~~C~~~~~~ 154 (215)
T TIGR02187 95 TGIPAGYEFAALIEDIVRVSQGEPGLSEKTVELLQS-------------------LDEPVR-IEVFVTPTCPYCPYAVLM 154 (215)
T ss_pred eecCCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHh-------------------cCCCcE-EEEEECCCCCCcHHHHHH
Confidence 1 23444555444321100 0011111111111 001111 111222457777777777
Q ss_pred HHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEEcCCCCC---CCCChHHHHHHHHH
Q 019273 279 LCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTST---QIGDYKKILSYLFQ 334 (343)
Q Consensus 279 L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~---~l~e~p~I~awl~r 334 (343)
+..+.. .+...+.. ..+++++-++...+|.++-...+. ....-..+..|+.+
T Consensus 155 l~~l~~~~~~i~~~~vD~~----~~~~~~~~~~V~~vPtl~i~~~~~~~~G~~~~~~l~~~l~~ 214 (215)
T TIGR02187 155 AHKFALANDKILGEMIEAN----ENPDLAEKYGVMSVPKIVINKGVEEFVGAYPEEQFLEYILS 214 (215)
T ss_pred HHHHHHhcCceEEEEEeCC----CCHHHHHHhCCccCCEEEEecCCEEEECCCCHHHHHHHHHh
Confidence 766643 22212222 234488877777889876222222 12344567777765
No 221
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=80.33 E-value=4.7 Score=29.42 Aligned_cols=71 Identities=13% Similarity=0.171 Sum_probs=44.2
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhh-CCCeEeEEE-cCCCCCCCCChHHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDIT-GSKEVPYLI-DPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~-g~~~~p~L~-~~~~g~~l~e~p~I~awl~ 333 (343)
+|....|++|+.++..|..++.+|-..++.+.-...+.+.++. +...+|.++ +...-+.......|.+.++
T Consensus 4 ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~~~~~~~~l~ 76 (77)
T TIGR02200 4 VYGTTWCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGNMTVPTVKFADGSFLTNPSAAQVKAKLQ 76 (77)
T ss_pred EEECCCChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCCceeCEEEECCCeEecCCCHHHHHHHhh
Confidence 3445689999999999999998887666655444223344443 666899886 2222222334556665553
No 222
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=80.14 E-value=3.9 Score=33.25 Aligned_cols=54 Identities=22% Similarity=0.345 Sum_probs=34.5
Q ss_pred cEEEE-EeCCChhHHHHHHHHHHcCCCe---EEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEc
Q 019273 134 RLQLF-EFEACPFCRRVREAITELDLSV---EWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLID 195 (343)
Q Consensus 134 ~l~LY-~~~~~P~~~rvr~~L~elgl~y---e~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd 195 (343)
.+.+| +.++||+|+.++-+++++.-.+ ++..+|. . ..++.. ..-+-..||+++.
T Consensus 24 ~vvv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~---d----~~~~l~-~~~~v~~vPt~~i 81 (113)
T cd02975 24 DLVVFSSKEGCQYCEVTKQLLEELSELSDKLKLEIYDF---D----EDKEKA-EKYGVERVPTTIF 81 (113)
T ss_pred EEEEEeCCCCCCChHHHHHHHHHHHHhcCceEEEEEeC---C----cCHHHH-HHcCCCcCCEEEE
Confidence 46666 4579999999988888765332 3444443 1 234444 4455778999965
No 223
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=79.36 E-value=9 Score=34.70 Aligned_cols=60 Identities=13% Similarity=0.239 Sum_probs=38.1
Q ss_pred CcEEEEEeCCChhHHHHHHHHHHcCCC---eEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCe
Q 019273 133 TRLQLFEFEACPFCRRVREAITELDLS---VEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGV 200 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~elgl~---ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~ 200 (343)
-.+.+|+.++||+|..+..+++++--. .....+|. ...++.. ...+-..||+++...+|.
T Consensus 135 v~I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~-------~~~~~~~-~~~~V~~vPtl~i~~~~~ 197 (215)
T TIGR02187 135 VRIEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEA-------NENPDLA-EKYGVMSVPKIVINKGVE 197 (215)
T ss_pred cEEEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeC-------CCCHHHH-HHhCCccCCEEEEecCCE
Confidence 357788999999999988888875322 33333442 1234444 445566899997653453
No 224
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=79.25 E-value=8.1 Score=31.99 Aligned_cols=68 Identities=13% Similarity=0.239 Sum_probs=35.5
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcC--CCeEEEEeeeecCCCCCc----ccHHHHHhhC---CCceeeEEEcCCCCee
Q 019273 134 RLQLFEFEACPFCRRVREAITELD--LSVEWMYEQVFPCPKGSI----RHREMVRRLG---GKEQFPFLIDPNTGVS 201 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elg--l~ye~~~vdl~~~~~~~~----~~~~~l~~~n---p~~~VP~Lvd~n~g~~ 201 (343)
.+..|+.++||+|+.+.-.|+++- -...+..||+......+. ...++....+ .-..+|+++.=++|..
T Consensus 26 ~iv~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~i~~~i~~~PT~v~~k~Gk~ 102 (122)
T TIGR01295 26 ATFFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSENNGSFEMSSLNDLTAFRSRFGIPTSFMGTPTFVHITDGKQ 102 (122)
T ss_pred EEEEEECCCChhHHHHhHHHHHHHHhcCCcEEEEECCCccCcCcccHHHHHHHHHHcCCcccCCCCCEEEEEeCCeE
Confidence 466678899999999776665542 123344455421000011 1234442222 2345999975445643
No 225
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=78.67 E-value=2.6 Score=34.14 Aligned_cols=27 Identities=19% Similarity=0.454 Sum_probs=20.8
Q ss_pred EEeCCChhHHHHHHHHHHcCCCeEEEE
Q 019273 138 FEFEACPFCRRVREAITELDLSVEWMY 164 (343)
Q Consensus 138 Y~~~~~P~~~rvr~~L~elgl~ye~~~ 164 (343)
|+.+.|.-|++++..|++.|++|+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d 27 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFID 27 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEE
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeeh
Confidence 888999999999999999999999543
No 226
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=78.62 E-value=3.2 Score=31.36 Aligned_cols=72 Identities=14% Similarity=0.177 Sum_probs=44.8
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccc--cccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhc
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNV--GDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~v--Gd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~ 337 (343)
++.+..++.++.++-+|.+++.+|-.+.+ ++++.+.. -.+......+|.|.+. |..+.++.+|.+|+.+.++
T Consensus 4 Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~-~~~~~~~g~vP~L~~~--g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 4 LHYFNGRGRMESIRWLLAAAGVEFEEKFIESAEDLEKLK-KDGSLMFQQVPMVEID--GMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCcEEEEeccHHHHHhhc-cccCCCCCCCCEEEEC--CEEEeeHHHHHHHHHHHcC
Confidence 34444555667788999999887753332 33211000 0011124488998752 4568999999999999876
No 227
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=78.01 E-value=2.8 Score=43.31 Aligned_cols=78 Identities=12% Similarity=0.109 Sum_probs=48.5
Q ss_pred CCcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecC----HHH
Q 019273 132 PTRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYE----SGD 207 (343)
Q Consensus 132 ~~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~E----S~a 207 (343)
+-.+++|..+.||||..+..++.++-+....+..+.++ ....++...+. .-..||.++.. |..+++ -..
T Consensus 117 ~~~i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id----~~~~~~~~~~~-~v~~VP~~~i~--~~~~~~g~~~~~~ 189 (517)
T PRK15317 117 DFHFETYVSLSCHNCPDVVQALNLMAVLNPNITHTMID----GALFQDEVEAR-NIMAVPTVFLN--GEEFGQGRMTLEE 189 (517)
T ss_pred CeEEEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEE----chhCHhHHHhc-CCcccCEEEEC--CcEEEecCCCHHH
Confidence 34689999999999999887777664432222222221 24456776444 46699999874 433333 456
Q ss_pred HHHHHhhhc
Q 019273 208 IVNYLFQQY 216 (343)
Q Consensus 208 I~~YL~~~y 216 (343)
|++.|.+..
T Consensus 190 ~~~~~~~~~ 198 (517)
T PRK15317 190 ILAKLDTGA 198 (517)
T ss_pred HHHHHhccc
Confidence 777776543
No 228
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=77.05 E-value=2.9 Score=31.33 Aligned_cols=62 Identities=24% Similarity=0.305 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhccCcccccc--cccCCccchhHhhhCC-CeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 272 ARIVREALCELELPYILQNV--GDGSSRTKLLVDITGS-KEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 272 ~~~Vr~~L~~Le~pyL~~~v--Gd~~T~~~~lADi~g~-~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
+..++-+|++.+.+|-...+ ..+..+.+++..+... ..+|.|.+. .|..+.++.+|.+|+.+
T Consensus 12 ~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~-~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 12 SERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDG-DGFVLTESNAILRYLAR 76 (76)
T ss_dssp THHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEET-TTEEEESHHHHHHHHHH
T ss_pred hHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEEC-CCCEEEcHHHHHHHhCC
Confidence 44678888888876654433 2333334778888877 899999875 57779999999999975
No 229
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=76.55 E-value=5.9 Score=37.44 Aligned_cols=69 Identities=22% Similarity=0.291 Sum_probs=53.3
Q ss_pred CCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 267 ENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 267 ~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
..||++++++-+|.+++.+|-.+.+.-. .+.+++.++.+...+|.|.+. +..+.|+..|..|+++.++.
T Consensus 71 g~cp~s~rV~i~L~ekgi~ye~~~vdl~-~~~~~fl~iNP~GkVPvL~~d--~~~L~ES~aI~~YL~e~~p~ 139 (265)
T PLN02817 71 GDCPFCQRVLLTLEEKHLPYDMKLVDLT-NKPEWFLKISPEGKVPVVKLD--EKWVADSDVITQALEEKYPD 139 (265)
T ss_pred CCCcHHHHHHHHHHHcCCCCEEEEeCcC-cCCHHHHhhCCCCCCCEEEEC--CEEEecHHHHHHHHHHHCCC
Confidence 4689999999999999998764433211 134558889988899999854 34589999999999999875
No 230
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=75.73 E-value=2.8 Score=43.26 Aligned_cols=76 Identities=14% Similarity=0.250 Sum_probs=47.3
Q ss_pred CcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecC----HHHH
Q 019273 133 TRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYE----SGDI 208 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~E----S~aI 208 (343)
-.+++|..+.||||..+..++.++-+....+..+..+ ....++...+.+ -..||.++.. |..+++ -.++
T Consensus 119 ~~i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id----~~~~~~~~~~~~-v~~VP~~~i~--~~~~~~g~~~~~~~ 191 (515)
T TIGR03140 119 LHFETYVSLTCQNCPDVVQALNQMALLNPNISHTMID----GALFQDEVEALG-IQGVPAVFLN--GEEFHNGRMDLAEL 191 (515)
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEE----chhCHHHHHhcC-CcccCEEEEC--CcEEEecCCCHHHH
Confidence 4588999999999999888887765432222222221 244567774444 5699999863 444333 3455
Q ss_pred HHHHhhh
Q 019273 209 VNYLFQQ 215 (343)
Q Consensus 209 ~~YL~~~ 215 (343)
++.|.+.
T Consensus 192 ~~~l~~~ 198 (515)
T TIGR03140 192 LEKLEET 198 (515)
T ss_pred HHHHhhc
Confidence 6666554
No 231
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=75.68 E-value=4.7 Score=32.00 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=47.6
Q ss_pred CCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 267 ENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 267 ~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
+.||||..+++.|..++.+|...++.+....+.++..+.+...+|.++.. |..+..+..+.++.+
T Consensus 25 ~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~~tvP~vfi~--g~~iGG~ddl~~l~~ 89 (97)
T TIGR00365 25 PQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNWPTIPQLYVK--GEFVGGCDIIMEMYQ 89 (97)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCCCCCCEEEEC--CEEEeChHHHHHHHH
Confidence 57999999999999999999988886655445567777788889988732 233555666666543
No 232
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=75.59 E-value=6.7 Score=29.12 Aligned_cols=70 Identities=20% Similarity=0.327 Sum_probs=47.8
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCC---ccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSS---RTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T---~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
+|....||+|..+++.|..++.+|-..++...-. .+.++.++.+...+|.++.. |..+..+..|.++.+.
T Consensus 4 ~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~--g~~igg~~~~~~~~~~ 76 (82)
T cd03419 4 VFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIG--GKFIGGCDDLMALHKS 76 (82)
T ss_pred EEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEEC--CEEEcCHHHHHHHHHc
Confidence 3444689999999999999998776555543221 12346677777789987732 3446777888877664
No 233
>PRK10329 glutaredoxin-like protein; Provisional
Probab=74.67 E-value=6.2 Score=30.25 Aligned_cols=71 Identities=13% Similarity=0.101 Sum_probs=44.1
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
.+|....||+|..+++.|++.+.+|-..++.+.....+++ ...|...+|.++....-+.-++-..|.++..
T Consensus 4 ~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~-~~~g~~~vPvv~i~~~~~~Gf~~~~l~~~~~ 74 (81)
T PRK10329 4 TIYTRNDCVQCHATKRAMESRGFDFEMINVDRVPEAAETL-RAQGFRQLPVVIAGDLSWSGFRPDMINRLHP 74 (81)
T ss_pred EEEeCCCCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHH-HHcCCCCcCEEEECCEEEecCCHHHHHHHHH
Confidence 4566678999999999999999999877776543311111 1236678998873322122234445555443
No 234
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=73.84 E-value=29 Score=26.32 Aligned_cols=73 Identities=15% Similarity=0.318 Sum_probs=43.4
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee------ec
Q 019273 134 RLQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS------MY 203 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~------l~ 203 (343)
-+..|+.++|+.|+...-.++++ +-++....||. . ..++.. +.-.-..+|.++--.+|.. ..
T Consensus 20 vvv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~---~----~~~~l~-~~~~v~~~Pt~~~~~~g~~~~~~~g~~ 91 (103)
T PF00085_consen 20 VVVYFYAPWCPPCKAFKPILEKLAKEYKDNVKFAKVDC---D----ENKELC-KKYGVKSVPTIIFFKNGKEVKRYNGPR 91 (103)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHHHHTTTTSEEEEEET---T----TSHHHH-HHTTCSSSSEEEEEETTEEEEEEESSS
T ss_pred EEEEEeCCCCCccccccceecccccccccccccchhhh---h----ccchhh-hccCCCCCCEEEEEECCcEEEEEECCC
Confidence 35566678999999888655444 22566666663 1 224445 4444678998854323433 23
Q ss_pred CHHHHHHHHhh
Q 019273 204 ESGDIVNYLFQ 214 (343)
Q Consensus 204 ES~aI~~YL~~ 214 (343)
+...|..+|.+
T Consensus 92 ~~~~l~~~i~~ 102 (103)
T PF00085_consen 92 NAESLIEFIEK 102 (103)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHHc
Confidence 55667776654
No 235
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=73.61 E-value=3.9 Score=31.31 Aligned_cols=54 Identities=19% Similarity=0.353 Sum_probs=39.1
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccccC-CccchhHhhh-CCCeEeEEEc
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGDGS-SRTKLLVDIT-GSKEVPYLID 315 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~-T~~~~lADi~-g~~~~p~L~~ 315 (343)
.+|....||||..++++|...+.+|-++++.+.- +.+.+.+... |...+|.++.
T Consensus 4 ~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~tvP~I~i 59 (80)
T COG0695 4 TIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQRTVPQIFI 59 (80)
T ss_pred EEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCCCcCEEEE
Confidence 3455578999999999999999888877777654 2222333333 7889999883
No 236
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=73.08 E-value=8.6 Score=28.44 Aligned_cols=63 Identities=17% Similarity=0.182 Sum_probs=46.3
Q ss_pred CChHHHHHHHHHHHhccCcccccccc-cCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHH
Q 019273 268 NNPYARIVREALCELELPYILQNVGD-GSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYL 332 (343)
Q Consensus 268 ~~p~~~~Vr~~L~~Le~pyL~~~vGd-~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl 332 (343)
.++++++++-+|.+++.+|-.+.+.- +-.+.+++.++.+...+|.|.+. |..+.++..|.+|+
T Consensus 9 ~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~g~vP~L~~~--g~~l~eS~aI~~YL 72 (73)
T cd03043 9 YSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPTGKVPVLVDG--GIVVWDSLAICEYL 72 (73)
T ss_pred CCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCCCcCCEEEEC--CEEEEcHHHHHHHh
Confidence 57888899999999988776443321 11123567788888899999753 45689999999997
No 237
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=72.86 E-value=12 Score=29.34 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=32.3
Q ss_pred cEEEEEeCCChhHHHHHHHH-------HHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 134 RLQLFEFEACPFCRRVREAI-------TELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L-------~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
.+..|+.++|++|++....+ ++.+=.+....||. .+.+....++. +...-..+|+++
T Consensus 14 vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~---~~~~~~~~~~~-~~~~i~~~Pti~ 77 (104)
T cd02953 14 VFVDFTADWCVTCKVNEKVVFSDPEVQAALKKDVVLLRADW---TKNDPEITALL-KRFGVFGPPTYL 77 (104)
T ss_pred EEEEEEcchhHHHHHHHHHhcCCHHHHHHHhCCeEEEEEec---CCCCHHHHHHH-HHcCCCCCCEEE
Confidence 45677789999998876433 22221456556664 22222234555 444456799884
No 238
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=72.35 E-value=18 Score=27.98 Aligned_cols=60 Identities=17% Similarity=0.260 Sum_probs=35.0
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee
Q 019273 134 RLQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS 201 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~ 201 (343)
.+.+|..++|+.|+...-.++++ +-.+....+|. . ..++.. ....-..+|+++.-++|.+
T Consensus 16 vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~---d----~~~~l~-~~~~v~~vPt~~i~~~g~~ 79 (97)
T cd02949 16 ILVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDI---D----EDQEIA-EAAGIMGTPTVQFFKDKEL 79 (97)
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEEC---C----CCHHHH-HHCCCeeccEEEEEECCeE
Confidence 45677779999999888777653 21344455553 1 123444 3334568998743224543
No 239
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=71.95 E-value=8.7 Score=35.75 Aligned_cols=77 Identities=22% Similarity=0.386 Sum_probs=57.0
Q ss_pred chhhhhccCCChHHHHHHHHHHHhcc--CcccccccccCCccchhHhhh-CCCeEeEEEcCCCCCCCCChHHHHHHHHHH
Q 019273 259 KKLELFSYENNPYARIVREALCELEL--PYILQNVGDGSSRTKLLVDIT-GSKEVPYLIDPNTSTQIGDYKKILSYLFQS 335 (343)
Q Consensus 259 ~~l~l~~~~~~p~~~~Vr~~L~~Le~--pyL~~~vGd~~T~~~~lADi~-g~~~~p~L~~~~~g~~l~e~p~I~awl~r~ 335 (343)
..+++++.-.|||+++++-+|..-+. .|+..++.+ +.+-+.-.. ....+|.|+. .|..+.|+-.|..|++.+
T Consensus 8 ~~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~~---Ks~~ll~~np~hkKVPvL~H--n~k~i~ESliiveYiDe~ 82 (231)
T KOG0406|consen 8 GTVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLTN---KSEWLLEKNPVHKKVPVLEH--NGKPICESLIIVEYIDET 82 (231)
T ss_pred CeEEEEEeecChHHHHHHHHHHhcCCceEEEecCCCC---CCHHHHHhccccccCCEEEE--CCceehhhHHHHHHHHhh
Confidence 34566766689999999999988877 555444444 334466666 5678999874 345589999999999999
Q ss_pred hcCCC
Q 019273 336 YSASP 340 (343)
Q Consensus 336 ~~~~~ 340 (343)
+.+++
T Consensus 83 w~~~~ 87 (231)
T KOG0406|consen 83 WPSGP 87 (231)
T ss_pred ccCCC
Confidence 98744
No 240
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=71.87 E-value=15 Score=26.78 Aligned_cols=57 Identities=16% Similarity=0.194 Sum_probs=33.8
Q ss_pred cEEEEEeCCChhHHHHHHHHHH-----cCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCe
Q 019273 134 RLQLFEFEACPFCRRVREAITE-----LDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGV 200 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~e-----lgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~ 200 (343)
-+.+|+.++|++|+.....+++ .++.+- .+|. .+ ..+.. ..-+...+|+++--+.|.
T Consensus 13 ~ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~--~i~~---~~----~~~~~-~~~~v~~~P~~~~~~~g~ 74 (93)
T cd02947 13 VVVDFWAPWCGPCKAIAPVLEELAEEYPKVKFV--KVDV---DE----NPELA-EEYGVRSIPTFLFFKNGK 74 (93)
T ss_pred EEEEEECCCChhHHHhhHHHHHHHHHCCCceEE--EEEC---CC----ChhHH-HhcCcccccEEEEEECCE
Confidence 3667777899999999988877 444333 3332 11 23444 333456789875322354
No 241
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=71.48 E-value=8.9 Score=40.02 Aligned_cols=53 Identities=13% Similarity=0.173 Sum_probs=35.4
Q ss_pred cEEEEEeCCChhHHHHHHHH----HHc-CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 134 RLQLFEFEACPFCRRVREAI----TEL-DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L----~el-gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
.+++|..++||+|..+..++ .+. +|.++++.+. ..++.. +.-.-..||.++.+
T Consensus 479 ~i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~---------~~~~~~-~~~~v~~vP~~~i~ 536 (555)
T TIGR03143 479 NIKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVS---------HFPDLK-DEYGIMSVPAIVVD 536 (555)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECc---------ccHHHH-HhCCceecCEEEEC
Confidence 47899999999997766544 444 5777744332 234555 34457799999874
No 242
>PRK10542 glutathionine S-transferase; Provisional
Probab=71.03 E-value=9.2 Score=33.58 Aligned_cols=67 Identities=21% Similarity=0.177 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhccCcccccccc--c-CCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 271 YARIVREALCELELPYILQNVGD--G-SSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 271 ~~~~Vr~~L~~Le~pyL~~~vGd--~-~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
.+..++-+|.+++.+|-.+.+.- . ..+.+++.++.+...+|.|... .|..+.++..|.+|+++.++.
T Consensus 10 ~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~-~g~~l~eS~aI~~YL~~~~~~ 79 (201)
T PRK10542 10 CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLD-DGTLLTEGVAIMQYLADSVPD 79 (201)
T ss_pred HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeC-CCcEeecHHHHHHHHHHhCcc
Confidence 35567888999888776444321 1 1123568888888899998732 356799999999999998864
No 243
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=70.53 E-value=7.8 Score=30.11 Aligned_cols=65 Identities=12% Similarity=0.108 Sum_probs=47.9
Q ss_pred CCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHH
Q 019273 267 ENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLF 333 (343)
Q Consensus 267 ~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~ 333 (343)
+.||+|..+++.|+.+..+|...++.++...+.++..+.+...+|.++.. |..+..+..+.++.+
T Consensus 21 ~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~~tvP~vfi~--g~~iGG~~~l~~l~~ 85 (90)
T cd03028 21 PRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWPTFPQLYVN--GELVGGCDIVKEMHE 85 (90)
T ss_pred CCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCCCCCCEEEEC--CEEEeCHHHHHHHHH
Confidence 47899999999999999999988876554434556666788889988732 334667777777654
No 244
>COG3011 Predicted thiol-disulfide oxidoreductase [General function prediction only]
Probab=68.22 E-value=21 Score=30.57 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=51.2
Q ss_pred CCCCcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCce---eeEEEcCCCCeeecCHH
Q 019273 130 DSPTRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQ---FPFLIDPNTGVSMYESG 206 (343)
Q Consensus 130 ~~~~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~---VP~Lvd~n~g~~l~ES~ 206 (343)
.+++.+.||... ||.|-...-.|...+..-.+...++. + +.....+ +..+... .=++.+. +|....+|.
T Consensus 6 ~~p~~vvlyDG~-C~lC~~~vrfLi~~D~~~~i~f~~~q----~-e~g~~~l-~~~~l~~~~~~s~~~~~-~g~~~~~sd 77 (137)
T COG3011 6 KKPDLVVLYDGV-CPLCDGWVRFLIRRDQGGRIRFAALQ----S-EPGQALL-EAAGLDPEDVDSVLLVE-AGQLLVGSD 77 (137)
T ss_pred CCCCEEEEECCc-chhHHHHHHHHHHhccCCcEEEEecc----C-chhhhHH-hhcCCChhhhheeeEec-CCceEeccH
Confidence 344556677665 99998888888888888777766652 2 2233444 3333221 1222222 488999999
Q ss_pred HHHHHHhhhc
Q 019273 207 DIVNYLFQQY 216 (343)
Q Consensus 207 aI~~YL~~~y 216 (343)
|+++-+....
T Consensus 78 A~~~i~~~L~ 87 (137)
T COG3011 78 AAIRILRLLP 87 (137)
T ss_pred HHHHHHHHCC
Confidence 9999998765
No 245
>PLN02395 glutathione S-transferase
Probab=68.09 E-value=12 Score=33.32 Aligned_cols=66 Identities=17% Similarity=0.250 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhccCccccccc--ccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhcC
Q 019273 271 YARIVREALCELELPYILQNVG--DGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYSA 338 (343)
Q Consensus 271 ~~~~Vr~~L~~Le~pyL~~~vG--d~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~~ 338 (343)
.+++++-+|.+++.+|-.+.+. ..-.+.+++..+.+...+|.|.+. |..+.|+..|.+|+++.+..
T Consensus 12 ~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~--~~~l~ES~aI~~YL~~~~~~ 79 (215)
T PLN02395 12 SPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDG--DYKIFESRAIMRYYAEKYRS 79 (215)
T ss_pred cHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEEC--CEEEEcHHHHHHHHHHHcCC
Confidence 3567888888888877644332 111233568888888899999853 45689999999999998864
No 246
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=67.65 E-value=16 Score=27.88 Aligned_cols=59 Identities=15% Similarity=0.161 Sum_probs=35.3
Q ss_pred EEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee
Q 019273 135 LQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS 201 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~ 201 (343)
+..|+.++|+.|++..-.|+++ ...+....+|. ...++...+.+ -..+|+++--++|..
T Consensus 18 ~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~-------~~~~~~~~~~~-i~~~Pt~~~~~~g~~ 80 (97)
T cd02984 18 VLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEA-------EELPEISEKFE-ITAVPTFVFFRNGTI 80 (97)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEcc-------ccCHHHHHhcC-CccccEEEEEECCEE
Confidence 4566678999999988777654 33455555553 12334443444 457998754334653
No 247
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=67.11 E-value=12 Score=29.72 Aligned_cols=55 Identities=16% Similarity=0.246 Sum_probs=40.1
Q ss_pred hhhhhccCCChHHHHHHHHHHHhccCcccccccccCCcc---chhHhhhCCCeEeEEE
Q 019273 260 KLELFSYENNPYARIVREALCELELPYILQNVGDGSSRT---KLLVDITGSKEVPYLI 314 (343)
Q Consensus 260 ~l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~---~~lADi~g~~~~p~L~ 314 (343)
++.+|....||+|.++++.|..++.+|-.+++.+..... +++..+.+...+|.++
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vf 66 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVF 66 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEE
Confidence 455666678999999999999999988877777543311 2344445677899877
No 248
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=66.49 E-value=11 Score=34.73 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=52.0
Q ss_pred CCcEEEEE-----eCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHH
Q 019273 132 PTRLQLFE-----FEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESG 206 (343)
Q Consensus 132 ~~~l~LY~-----~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~ 206 (343)
.+++.||- .|.|.|++.+.-.|.+.|++|+... +-.+++ -++-+++.+-.-++|-|... |..+....
T Consensus 138 a~~v~lFmKG~p~~P~CGFS~~~v~iL~~~nV~~~~fd-----IL~Dee-lRqglK~fSdWPTfPQlyI~--GEFiGGlD 209 (227)
T KOG0911|consen 138 AKPVMLFMKGTPEEPKCGFSRQLVGILQSHNVNYTIFD-----VLTDEE-LRQGLKEFSDWPTFPQLYVK--GEFIGGLD 209 (227)
T ss_pred cCeEEEEecCCCCcccccccHHHHHHHHHcCCCeeEEe-----ccCCHH-HHHHhhhhcCCCCccceeEC--CEeccCcH
Confidence 34677775 4679999999999999999999443 334443 34556688999999999763 76655555
Q ss_pred HHHHHHh
Q 019273 207 DIVNYLF 213 (343)
Q Consensus 207 aI~~YL~ 213 (343)
-|.+.+.
T Consensus 210 Il~~m~~ 216 (227)
T KOG0911|consen 210 ILKEMHE 216 (227)
T ss_pred HHHHHhh
Confidence 4444443
No 249
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=65.52 E-value=9.3 Score=29.07 Aligned_cols=66 Identities=17% Similarity=0.170 Sum_probs=41.3
Q ss_pred CChHHHHHHHHHHHhccCccccccc----ccCCccchhH-hh----hCCCeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 268 NNPYARIVREALCELELPYILQNVG----DGSSRTKLLV-DI----TGSKEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 268 ~~p~~~~Vr~~L~~Le~pyL~~~vG----d~~T~~~~lA-Di----~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
.++.++.++-+|.+++.+|-.+.++ +... .++.. .. .....+|.|.+. |..+.++.+|.+|+.+.+
T Consensus 8 ~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~-~~~~~~~~~~~~~P~g~vP~L~~~--g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 8 IRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYD-RSQWLNEKFKLGLDFPNLPYYIDG--DVKLTQSNAILRYIARKH 82 (82)
T ss_pred CccccHHHHHHHHHcCCCcEEEEeccCCccccc-hHhhhccchhcCCcCCCCCEEEEC--CEEEeehHHHHHHHhhcC
Confidence 3445667888888888866644432 1110 01111 11 155689999863 567999999999998754
No 250
>PHA03050 glutaredoxin; Provisional
Probab=64.67 E-value=11 Score=30.73 Aligned_cols=69 Identities=23% Similarity=0.454 Sum_probs=45.9
Q ss_pred hhhhhccCCChHHHHHHHHHHHhcc---Ccccccccc---cCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHH
Q 019273 260 KLELFSYENNPYARIVREALCELEL---PYILQNVGD---GSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILS 330 (343)
Q Consensus 260 ~l~l~~~~~~p~~~~Vr~~L~~Le~---pyL~~~vGd---~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~a 330 (343)
.+.+|....||||..+++.|..+.. +|-.+++-+ +.-.++++..+.+...+|.++.. |..+..+..+.+
T Consensus 14 ~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~--g~~iGG~ddl~~ 88 (108)
T PHA03050 14 KVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFG--KTSIGGYSDLLE 88 (108)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEEC--CEEEeChHHHHH
Confidence 3456666789999999999999987 676666654 22224556777788899998732 222444544544
No 251
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=62.90 E-value=11 Score=36.07 Aligned_cols=71 Identities=28% Similarity=0.335 Sum_probs=48.2
Q ss_pred chhhhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhh--CCCeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 259 KKLELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDIT--GSKEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 259 ~~l~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~--g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
..+.+|.|+.||||-+||..|+....+|-++.+- -.+ =.||- ...-+|.|... |..|.++..|..-+....
T Consensus 89 L~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVn-pV~----r~eIk~SsykKVPil~~~--Geqm~dSsvIIs~laTyL 161 (370)
T KOG3029|consen 89 LDLVLYQYETCPFCCKVRAFLDYHGISYAVVEVN-PVL----RQEIKWSSYKKVPILLIR--GEQMVDSSVIISLLATYL 161 (370)
T ss_pred ceEEEEeeccCchHHHHHHHHhhcCCceEEEEec-chh----hhhccccccccccEEEec--cceechhHHHHHHHHHHh
Confidence 4567889999999999999999999999844432 223 23332 23368887743 445888877776554433
No 252
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=62.02 E-value=12 Score=28.46 Aligned_cols=58 Identities=16% Similarity=0.285 Sum_probs=39.8
Q ss_pred CChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 268 NNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 268 ~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
..+.+.+++..|.+++.+|-.+...+.-. .+ +...+|++.+ .|..+.+++.|..|+.+
T Consensus 16 ~~~~~~kv~~~L~elglpye~~~~~~~~~----~~---P~GkVP~L~~--dg~vI~eS~aIl~yL~~ 73 (74)
T cd03079 16 DNASCLAVQTFLKMCNLPFNVRCRANAEF----MS---PSGKVPFIRV--GNQIVSEFGPIVQFVEA 73 (74)
T ss_pred CCCCHHHHHHHHHHcCCCcEEEecCCccc----cC---CCCcccEEEE--CCEEEeCHHHHHHHHhc
Confidence 45667789999999999987432211001 11 2247999876 34568999999999975
No 253
>TIGR01068 thioredoxin thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.
Probab=61.35 E-value=48 Score=24.90 Aligned_cols=53 Identities=21% Similarity=0.346 Sum_probs=30.3
Q ss_pred EEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEc
Q 019273 135 LQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLID 195 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd 195 (343)
+..|+.++|+.|+.....++.+ +-...+..+|. .+ .++...+. .-..+|+++-
T Consensus 18 vi~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~---~~----~~~~~~~~-~v~~~P~~~~ 74 (101)
T TIGR01068 18 LVDFWAPWCGPCKMIAPILEELAKEYEGKVKFVKLNV---DE----NPDIAAKY-GIRSIPTLLL 74 (101)
T ss_pred EEEEECCCCHHHHHhCHHHHHHHHHhcCCeEEEEEEC---CC----CHHHHHHc-CCCcCCEEEE
Confidence 4455567899999887666554 32355555553 11 22333233 3457998753
No 254
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=61.34 E-value=23 Score=28.62 Aligned_cols=62 Identities=11% Similarity=0.077 Sum_probs=37.2
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCC---CeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeec
Q 019273 134 RLQLFEFEACPFCRRVREAITELDL---SVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMY 203 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl---~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ 203 (343)
-+..|+.++|+.|+.+.-.++++.- ...+..||.. ..++.. +...-..+|+++-=.+|..+.
T Consensus 25 vvV~f~a~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~-------~~~~l~-~~~~v~~vPt~l~fk~G~~v~ 89 (113)
T cd02989 25 VVCHFYHPEFFRCKIMDKHLEILAKKHLETKFIKVNAE-------KAPFLV-EKLNIKVLPTVILFKNGKTVD 89 (113)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHcCCCEEEEEEcc-------cCHHHH-HHCCCccCCEEEEEECCEEEE
Confidence 3556666899999988877766432 2355555531 223333 444566899986433466543
No 255
>PHA03075 glutaredoxin-like protein; Provisional
Probab=60.70 E-value=14 Score=30.68 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=46.4
Q ss_pred CcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecCHHHHHHHH
Q 019273 133 TRLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYESGDIVNYL 212 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~ES~aI~~YL 212 (343)
+.+.|++.|.|+-|.-+..+|+++.=+|++..|++. .++ . -.++|=+|-.+.....+ ..|.+||
T Consensus 3 ~tLILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIl----------SfF-s--K~g~v~~lg~d~~y~lI---nn~~~~l 66 (123)
T PHA03075 3 KTLILFGKPLCSVCESISEALKELEDEYDILRVNIL----------SFF-S--KDGQVKVLGMDKGYTLI---NNFFKHL 66 (123)
T ss_pred ceEEEeCCcccHHHHHHHHHHHHhhccccEEEEEee----------eee-c--cCCceEEEecccceehH---HHHHHhh
Confidence 468899999999999999999999999999988863 133 2 24566667542111222 3466666
Q ss_pred hhh
Q 019273 213 FQQ 215 (343)
Q Consensus 213 ~~~ 215 (343)
...
T Consensus 67 gne 69 (123)
T PHA03075 67 GNE 69 (123)
T ss_pred ccc
Confidence 643
No 256
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=58.97 E-value=54 Score=26.17 Aligned_cols=59 Identities=19% Similarity=0.237 Sum_probs=31.7
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc-----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCe
Q 019273 134 RLQLFEFEACPFCRRVREAITEL-----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGV 200 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el-----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~ 200 (343)
-+..|+.++|+.|+...-.++++ +....+..||. .+ .++.. ...+-..+|+++--++|.
T Consensus 27 vlV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~---d~----~~~l~-~~~~V~~~Pt~~i~~~g~ 90 (111)
T cd02963 27 YLIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNA---GH----ERRLA-RKLGAHSVPAIVGIINGQ 90 (111)
T ss_pred EEEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEec---cc----cHHHH-HHcCCccCCEEEEEECCE
Confidence 35566778999997665444332 22344444543 11 12333 334567899885322454
No 257
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=57.73 E-value=35 Score=27.82 Aligned_cols=21 Identities=19% Similarity=0.471 Sum_probs=15.3
Q ss_pred EEEEEeCCChhHHHHHHHHHH
Q 019273 135 LQLFEFEACPFCRRVREAITE 155 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~e 155 (343)
+..|+.++|++|++..-.+.+
T Consensus 23 lV~F~a~WC~~C~~~~~~~~~ 43 (117)
T cd02959 23 MLLIHKTWCGACKALKPKFAE 43 (117)
T ss_pred EEEEeCCcCHHHHHHHHHHhh
Confidence 445667899999888655555
No 258
>PRK10996 thioredoxin 2; Provisional
Probab=57.52 E-value=87 Score=26.21 Aligned_cols=60 Identities=15% Similarity=0.132 Sum_probs=34.7
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee
Q 019273 134 RLQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS 201 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~ 201 (343)
.+..|+.++|+.|+...-.++++ +-.+.+..+|.. ..++.. +...-..+|.++.-.+|..
T Consensus 55 vvv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~-------~~~~l~-~~~~V~~~Ptlii~~~G~~ 118 (139)
T PRK10996 55 VVIDFWAPWCGPCRNFAPIFEDVAAERSGKVRFVKVNTE-------AERELS-ARFRIRSIPTIMIFKNGQV 118 (139)
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEeCC-------CCHHHH-HhcCCCccCEEEEEECCEE
Confidence 35566778999999865555443 334555555531 123444 3344568998854334653
No 259
>PRK09381 trxA thioredoxin; Provisional
Probab=57.39 E-value=53 Score=25.69 Aligned_cols=59 Identities=17% Similarity=0.199 Sum_probs=32.9
Q ss_pred EEEEEeCCChhHHHHHHHHHH----cCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee
Q 019273 135 LQLFEFEACPFCRRVREAITE----LDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS 201 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~e----lgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~ 201 (343)
+..|+.++||.|+...-.+++ .+-.+.+..+|. .+ .+....+. +-..+|+++--++|..
T Consensus 25 vv~f~~~~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~---~~----~~~~~~~~-~v~~~Pt~~~~~~G~~ 87 (109)
T PRK09381 25 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI---DQ----NPGTAPKY-GIRGIPTLLLFKNGEV 87 (109)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCCcEEEEEEC---CC----ChhHHHhC-CCCcCCEEEEEeCCeE
Confidence 455566899999987655544 232345555553 11 12333233 3568998854334654
No 260
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=57.23 E-value=57 Score=26.23 Aligned_cols=62 Identities=13% Similarity=0.110 Sum_probs=32.6
Q ss_pred cEEEEEeCCCh------hHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhC---------CCceeeEEEcCCC
Q 019273 134 RLQLFEFEACP------FCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLG---------GKEQFPFLIDPNT 198 (343)
Q Consensus 134 ~l~LY~~~~~P------~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~n---------p~~~VP~Lvd~n~ 198 (343)
.+++|....+. .++++..+|+.++|+|+.+ |+ ... +..+++..+.. +....|.|..+
T Consensus 2 ~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~v--DI---a~~-e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~-- 73 (99)
T PF04908_consen 2 VIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEV--DI---AMD-EEARQWMRENAGPEEKDPGNGKPLPPQIFNG-- 73 (99)
T ss_dssp SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEE--ET---TT--HHHHHHHHHHT--CCCS-TSTT--S-EEEET--
T ss_pred EEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEE--eC---cCC-HHHHHHHHHhccccccCCCCCCCCCCEEEeC--
Confidence 46788765333 5688999999999999943 33 333 34445554443 33345777654
Q ss_pred Ceeec
Q 019273 199 GVSMY 203 (343)
Q Consensus 199 g~~l~ 203 (343)
+..+.
T Consensus 74 ~~Y~G 78 (99)
T PF04908_consen 74 DEYCG 78 (99)
T ss_dssp TEEEE
T ss_pred CEEEe
Confidence 44433
No 261
>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX. TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.
Probab=56.93 E-value=87 Score=23.98 Aligned_cols=58 Identities=17% Similarity=0.268 Sum_probs=33.0
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc-----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCC
Q 019273 134 RLQLFEFEACPFCRRVREAITEL-----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTG 199 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el-----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g 199 (343)
.+..|+.++|+.|+...-.++++ +..+.+..||. .+ .++.. +.-.-..+|.++--.+|
T Consensus 19 ~lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~---~~----~~~~~-~~~~i~~~Pt~~~~~~g 81 (101)
T cd02994 19 WMIEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDV---TQ----EPGLS-GRFFVTALPTIYHAKDG 81 (101)
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHhhccCCeEEEEEEc---cC----CHhHH-HHcCCcccCEEEEeCCC
Confidence 46777788999998877655544 23344444443 11 22333 33345678888643234
No 262
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=55.65 E-value=11 Score=29.69 Aligned_cols=21 Identities=19% Similarity=0.684 Sum_probs=14.5
Q ss_pred cEEEEEeCCChhHHHHHHHHH
Q 019273 134 RLQLFEFEACPFCRRVREAIT 154 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~ 154 (343)
.+.+|..++||+|++....+.
T Consensus 8 ~v~~F~~~~C~~C~~~~~~~~ 28 (112)
T PF13098_consen 8 IVVVFTDPWCPYCKKLEKELF 28 (112)
T ss_dssp EEEEEE-TT-HHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHH
Confidence 456677899999998876655
No 263
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=55.53 E-value=59 Score=26.20 Aligned_cols=18 Identities=33% Similarity=0.958 Sum_probs=14.0
Q ss_pred cEEEEEeCCChhHHHHHH
Q 019273 134 RLQLFEFEACPFCRRVRE 151 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~ 151 (343)
.+..|+.++|++|++...
T Consensus 17 vlv~f~a~wC~~C~~~~~ 34 (125)
T cd02951 17 LLLLFSQPGCPYCDKLKR 34 (125)
T ss_pred EEEEEeCCCCHHHHHHHH
Confidence 466777889999998764
No 264
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=54.59 E-value=25 Score=32.46 Aligned_cols=34 Identities=18% Similarity=0.527 Sum_probs=23.5
Q ss_pred CCCcEEEEEeCCChhHHHHHHHHHHc-CCCeEEEE
Q 019273 131 SPTRLQLFEFEACPFCRRVREAITEL-DLSVEWMY 164 (343)
Q Consensus 131 ~~~~l~LY~~~~~P~~~rvr~~L~el-gl~ye~~~ 164 (343)
+...+.+|.-+.||||++..--+.++ ...++++.
T Consensus 107 ~k~~I~vFtDp~CpyCkkl~~~l~~~~~~~v~v~~ 141 (232)
T PRK10877 107 EKHVITVFTDITCGYCHKLHEQMKDYNALGITVRY 141 (232)
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHhcCCeEEEE
Confidence 34457788889999999998777665 33344433
No 265
>PTZ00051 thioredoxin; Provisional
Probab=54.15 E-value=73 Score=24.17 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=34.2
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCC---CeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee
Q 019273 134 RLQLFEFEACPFCRRVREAITELDL---SVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS 201 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl---~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~ 201 (343)
-+..|+.++|+.|+...-.++.+.- .+....+|. . ...+.. +.-.-..+|+++--.+|..
T Consensus 21 vli~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~---~----~~~~~~-~~~~v~~~Pt~~~~~~g~~ 83 (98)
T PTZ00051 21 VIVDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDV---D----ELSEVA-EKENITSMPTFKVFKNGSV 83 (98)
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEEC---c----chHHHH-HHCCCceeeEEEEEeCCeE
Confidence 3556677899999988776665422 233444442 1 123444 3334568998754334543
No 266
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=52.95 E-value=27 Score=30.92 Aligned_cols=24 Identities=21% Similarity=0.689 Sum_probs=20.0
Q ss_pred CCcEEEEEeCCChhHHHHHHHHHH
Q 019273 132 PTRLQLFEFEACPFCRRVREAITE 155 (343)
Q Consensus 132 ~~~l~LY~~~~~P~~~rvr~~L~e 155 (343)
+..+.+|.-+.||||++....+.+
T Consensus 78 ~~~i~~f~D~~Cp~C~~~~~~l~~ 101 (197)
T cd03020 78 KRVVYVFTDPDCPYCRKLEKELKP 101 (197)
T ss_pred CEEEEEEECCCCccHHHHHHHHhh
Confidence 346778888999999999988875
No 267
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=52.89 E-value=37 Score=25.28 Aligned_cols=57 Identities=21% Similarity=0.211 Sum_probs=40.7
Q ss_pred CChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 268 NNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 268 ~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
.+|+|-++...|+..+.+|-.+...+ .+..+...+|++.+. |..+.++..|.+|+++
T Consensus 15 ~sp~clk~~~~Lr~~~~~~~v~~~~n--------~~~sp~gkLP~l~~~--~~~i~d~~~Ii~~L~~ 71 (73)
T cd03078 15 VDPECLAVLAYLKFAGAPLKVVPSNN--------PWRSPTGKLPALLTS--GTKISGPEKIIEYLRK 71 (73)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEecCC--------CCCCCCCccCEEEEC--CEEecChHHHHHHHHH
Confidence 56899888888888777887332222 122344579998854 5668899999999986
No 268
>PHA02278 thioredoxin-like protein
Probab=52.70 E-value=75 Score=25.39 Aligned_cols=64 Identities=16% Similarity=0.282 Sum_probs=34.2
Q ss_pred EEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeee
Q 019273 135 LQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSM 202 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l 202 (343)
+.-|+.++|+.|+...-.++++ +....+..||+ .+.....++.. ..-.-..+|+++-=.+|..+
T Consensus 18 vV~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdv---d~~~~d~~~l~-~~~~I~~iPT~i~fk~G~~v 85 (103)
T PHA02278 18 IVMITQDNCGKCEILKSVIPMFQESGDIKKPILTLNL---DAEDVDREKAV-KLFDIMSTPVLIGYKDGQLV 85 (103)
T ss_pred EEEEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEEC---CccccccHHHH-HHCCCccccEEEEEECCEEE
Confidence 4445568999999887666655 22233455554 11111123333 33345688988643346543
No 269
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=52.44 E-value=78 Score=24.07 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=32.4
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc----C--CCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCe
Q 019273 134 RLQLFEFEACPFCRRVREAITEL----D--LSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGV 200 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el----g--l~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~ 200 (343)
-+.+|+.++||.|+...-.+.++ . -.+....+|. .. ....+...+. +-..+|.++.-.+|.
T Consensus 20 ~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~id~---~~--~~~~~~~~~~-~i~~~Pt~~~~~~g~ 86 (104)
T cd02997 20 VLVMFYAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDC---TK--PEHDALKEEY-NVKGFPTFKYFENGK 86 (104)
T ss_pred EEEEEECCCCHHHHHhCHHHHHHHHHHhhCCceEEEEEEC---CC--CccHHHHHhC-CCccccEEEEEeCCC
Confidence 46677788999998875333322 2 2233333442 22 1234444333 455789885433454
No 270
>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein. It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.
Probab=52.35 E-value=46 Score=27.43 Aligned_cols=58 Identities=9% Similarity=0.052 Sum_probs=34.6
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCC----eEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCe
Q 019273 135 LQLFEFEACPFCRRVREAITELDLS----VEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGV 200 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~----ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~ 200 (343)
+.-|+.+||+.|+...-+++++--. .....||+. ..++.. +.-.-..||+++-=.+|.
T Consensus 18 VV~F~A~WCgpCk~m~P~le~la~~~~~~v~f~kVDvD-------~~~~la-~~~~V~~iPTf~~fk~G~ 79 (114)
T cd02954 18 VIRFGRDWDPVCMQMDEVLAKIAEDVSNFAVIYLVDID-------EVPDFN-KMYELYDPPTVMFFFRNK 79 (114)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHccCceEEEEEECC-------CCHHHH-HHcCCCCCCEEEEEECCE
Confidence 4446778999999888777666433 234555541 233444 444456799885432354
No 271
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=49.79 E-value=21 Score=30.18 Aligned_cols=57 Identities=21% Similarity=0.075 Sum_probs=36.8
Q ss_pred HHHHHHHHHhcc----CcccccccccCCccchhHhhhCCCeEeEEE--cCCCCCCCCChHHHHHHHHHHhcCCCC
Q 019273 273 RIVREALCELEL----PYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTSTQIGDYKKILSYLFQSYSASPS 341 (343)
Q Consensus 273 ~~Vr~~L~~Le~----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~~l~e~p~I~awl~r~~~~~~~ 341 (343)
..+...|.+|+. +-- ++.+++ +-||. +||.|. .-..|+ .=-++|.+|++++-...+=
T Consensus 63 ~~l~~~L~~l~~ll~~~~~---~n~~ls----~DDi~---lFp~LR~Lt~vkgi--~~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 63 AALNALLEELDPLILSSEA---VNGQLS----TDDII---LFPILRNLTLVKGL--VFPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHcCccc---cCCcCC----HHHHH---HHHHHhhhhhhcCC--CCCHHHHHHHHHHHHHhCC
Confidence 345555555543 333 566789 99999 899876 222233 2246899999999775543
No 272
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=48.64 E-value=63 Score=25.52 Aligned_cols=55 Identities=22% Similarity=0.370 Sum_probs=31.4
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcC-----CCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 134 RLQLFEFEACPFCRRVREAITELD-----LSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elg-----l~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
-+..|+.++||.|++..-.++++. ..+.+..||. ... ...+..+..+-..+|.++
T Consensus 24 vlv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~---d~~---~~~~~~~~~~v~~~Pti~ 83 (109)
T cd02993 24 TLVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNA---DGE---QREFAKEELQLKSFPTIL 83 (109)
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEEC---Ccc---chhhHHhhcCCCcCCEEE
Confidence 467778899999988765555432 2344444442 221 112222334566899874
No 273
>cd02950 TxlA TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus. It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport.
Probab=47.91 E-value=1.7e+02 Score=24.60 Aligned_cols=60 Identities=17% Similarity=0.281 Sum_probs=32.5
Q ss_pred EEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE--cCCCCee
Q 019273 135 LQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI--DPNTGVS 201 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv--d~n~g~~ 201 (343)
+..|+.++|+.|+...-.++++ +-.+.++.|++. . ....+.. ....-..+|.++ +. +|.+
T Consensus 24 vV~F~A~WC~~C~~~~p~l~~l~~~~~~~~~~v~v~vd---~--~~~~~~~-~~~~V~~iPt~v~~~~-~G~~ 89 (142)
T cd02950 24 LVEFYADWCTVCQEMAPDVAKLKQKYGDQVNFVMLNVD---N--PKWLPEI-DRYRVDGIPHFVFLDR-EGNE 89 (142)
T ss_pred EEEEECCcCHHHHHhHHHHHHHHHHhccCeeEEEEEcC---C--cccHHHH-HHcCCCCCCEEEEECC-CCCE
Confidence 4455567999998877666554 222445555541 1 1223444 333355789774 43 4654
No 274
>cd03023 DsbA_Com1_like DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.
Probab=43.94 E-value=22 Score=29.21 Aligned_cols=23 Identities=13% Similarity=0.442 Sum_probs=17.8
Q ss_pred CcEEEEEeCCChhHHHHHHHHHH
Q 019273 133 TRLQLFEFEACPFCRRVREAITE 155 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~e 155 (343)
-.+..|.-+.||+|++..-.++.
T Consensus 7 ~~i~~f~D~~Cp~C~~~~~~l~~ 29 (154)
T cd03023 7 VTIVEFFDYNCGYCKKLAPELEK 29 (154)
T ss_pred EEEEEEECCCChhHHHhhHHHHH
Confidence 35777778899999998766655
No 275
>cd02961 PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI and PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5, PDIR, ERp46 and the transmembrane PDIs. PDI, ERp57, ERp72, P5, PDIR and ERp46 are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins usually contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and may also contain one or more redox inactive TRX-like (b) domains. Only one a domain is required for the oxidase function but multiple copies
Probab=42.36 E-value=1.2e+02 Score=22.37 Aligned_cols=54 Identities=17% Similarity=0.217 Sum_probs=31.8
Q ss_pred CcEEEEEeCCChhHHHHHHHHHHc------CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 133 TRLQLFEFEACPFCRRVREAITEL------DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~el------gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
.-+.+|..++|++|+...-.+++. +-.+.+..+|. .+ ..++. +.-+-..+|.++
T Consensus 17 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~----~~~~~-~~~~i~~~Pt~~ 76 (101)
T cd02961 17 DVLVEFYAPWCGHCKALAPEYEKLAKELKGDGKVVVAKVDC---TA----NNDLC-SEYGVRGYPTIK 76 (101)
T ss_pred cEEEEEECCCCHHHHhhhHHHHHHHHHhccCCceEEEEeec---cc----hHHHH-HhCCCCCCCEEE
Confidence 356777788999999887766553 22344444442 11 23444 333456789874
No 276
>cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is composed of the three TRX domains located at the C-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. Also included in the alignment is the single complete TRX domain of an uncharacterized protein from Tetraodon nigroviridis, which also contains a DnaJ domain at its N-terminus.
Probab=42.28 E-value=67 Score=24.80 Aligned_cols=53 Identities=11% Similarity=0.145 Sum_probs=30.3
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCC----eEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLS----VEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~----ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
-+..|+.++|+.|++..-.++++--. +.+..||. . ..++.. +..+-..+|.++
T Consensus 22 v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~---~----~~~~~~-~~~~i~~~Pt~~ 78 (104)
T cd03004 22 WLVDFYAPWCGPCQALLPELRKAARALKGKVKVGSVDC---Q----KYESLC-QQANIRAYPTIR 78 (104)
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEEC---C----chHHHH-HHcCCCcccEEE
Confidence 35566778999998876555544322 34444442 2 123433 333456889875
No 277
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=41.90 E-value=29 Score=32.48 Aligned_cols=23 Identities=17% Similarity=0.572 Sum_probs=18.1
Q ss_pred CcEEEEEeCCChhHHHHHHHHHH
Q 019273 133 TRLQLFEFEACPFCRRVREAITE 155 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~e 155 (343)
..+.+|.-+.||||++.+..+.+
T Consensus 119 ~~I~vFtDp~CpyC~kl~~~l~~ 141 (251)
T PRK11657 119 RIVYVFADPNCPYCKQFWQQARP 141 (251)
T ss_pred eEEEEEECCCChhHHHHHHHHHH
Confidence 45777778899999999876654
No 278
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=41.17 E-value=30 Score=27.95 Aligned_cols=43 Identities=14% Similarity=0.197 Sum_probs=32.4
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhh
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDIT 305 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~ 305 (343)
+|....|++|+++++.|+..+.+|-.+++-+....++++.++.
T Consensus 3 iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~~~~ 45 (111)
T cd03036 3 FYEYPKCSTCRKAKKWLDEHGVDYTAIDIVEEPPSKEELKKWL 45 (111)
T ss_pred EEECCCCHHHHHHHHHHHHcCCceEEecccCCcccHHHHHHHH
Confidence 5666789999999999999888998888765443355565555
No 279
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=40.65 E-value=69 Score=23.46 Aligned_cols=67 Identities=24% Similarity=0.387 Sum_probs=42.8
Q ss_pred cCCChHHHHHHHHHHHhccC--cccccccccCC---ccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHH
Q 019273 266 YENNPYARIVREALCELELP--YILQNVGDGSS---RTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQ 334 (343)
Q Consensus 266 ~~~~p~~~~Vr~~L~~Le~p--yL~~~vGd~~T---~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r 334 (343)
-..||+|..++..|..+..+ |-..++...-. .++.+.+..+...+|.++.. |..+..+..+.++.+.
T Consensus 6 ~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~--g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 6 KSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFIN--GKFIGGCSDLLALYKS 77 (84)
T ss_pred CCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEEC--CEEEcCHHHHHHHHHc
Confidence 35799999999999999876 65445543211 12235566677788987632 3345666677766543
No 280
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=40.48 E-value=48 Score=26.40 Aligned_cols=69 Identities=16% Similarity=0.300 Sum_probs=39.8
Q ss_pred EeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHH--hhC---CCceeeEEEcCCCCe-eecCHHHHHHHH
Q 019273 139 EFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVR--RLG---GKEQFPFLIDPNTGV-SMYESGDIVNYL 212 (343)
Q Consensus 139 ~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~--~~n---p~~~VP~Lvd~n~g~-~l~ES~aI~~YL 212 (343)
+-..||+|.+..-.++.++-.-.+..+++.. + ...+.+. .++ -...+-+ ++ +|. +...+.|+.+-+
T Consensus 3 YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~----~-~~~~~~~~~~~~~~~~~~~l~~-~~--~g~~~~~G~~A~~~l~ 74 (114)
T PF04134_consen 3 YDGDCPLCRREVRFLRRRDRGGRLRFVDIQS----E-PDQALLASYGISPEDADSRLHL-ID--DGERVYRGSDAVLRLL 74 (114)
T ss_pred ECCCCHhHHHHHHHHHhcCCCCCEEEEECCC----h-hhhhHHHhcCcCHHHHcCeeEE-ec--CCCEEEEcHHHHHHHH
Confidence 3345999999998888887655555555421 1 1111110 111 2233333 33 365 899999998887
Q ss_pred hhh
Q 019273 213 FQQ 215 (343)
Q Consensus 213 ~~~ 215 (343)
...
T Consensus 75 ~~~ 77 (114)
T PF04134_consen 75 RRL 77 (114)
T ss_pred HHc
Confidence 664
No 281
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=40.04 E-value=45 Score=28.78 Aligned_cols=33 Identities=24% Similarity=0.534 Sum_probs=23.5
Q ss_pred EEEEEeCCChhHHHHH----HHHHHc-CCCeEEEEeee
Q 019273 135 LQLFEFEACPFCRRVR----EAITEL-DLSVEWMYEQV 167 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr----~~L~el-gl~ye~~~vdl 167 (343)
+++|.-..||||.... .++++. ++.++.+.+.+
T Consensus 2 i~~~~D~~Cp~cy~~~~~l~~l~~~~~~~~i~~~p~~l 39 (193)
T PF01323_consen 2 IEFFFDFICPWCYLASPRLRKLRAEYPDVEIEWRPFPL 39 (193)
T ss_dssp EEEEEBTTBHHHHHHHHHHHHHHHHHTTCEEEEEEESS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhcCCcEEEecccc
Confidence 6788888999995544 455555 77777666654
No 282
>cd02970 PRX_like2 Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.
Probab=38.94 E-value=30 Score=28.44 Aligned_cols=57 Identities=25% Similarity=0.363 Sum_probs=29.6
Q ss_pred cEEEEE--eCCChhHHHHHHHHHHc-----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 134 RLQLFE--FEACPFCRRVREAITEL-----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 134 ~l~LY~--~~~~P~~~rvr~~L~el-----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
.+.|+. ..+||.|++-.-.|.++ +..++++.|.. ........+. +.. .-.+|++.|+
T Consensus 25 ~~vl~f~~~~~Cp~C~~~~~~l~~~~~~~~~~~v~vv~V~~----~~~~~~~~~~-~~~-~~~~p~~~D~ 88 (149)
T cd02970 25 PVVVVFYRGFGCPFCREYLRALSKLLPELDALGVELVAVGP----ESPEKLEAFD-KGK-FLPFPVYADP 88 (149)
T ss_pred CEEEEEECCCCChhHHHHHHHHHHHHHHHHhcCeEEEEEeC----CCHHHHHHHH-Hhc-CCCCeEEECC
Confidence 344444 46899998755444443 12344444432 1111222344 333 3468999986
No 283
>cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1. TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases.
Probab=38.69 E-value=1.6e+02 Score=24.41 Aligned_cols=64 Identities=17% Similarity=0.164 Sum_probs=30.1
Q ss_pred CCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeeecC
Q 019273 141 EACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSMYE 204 (343)
Q Consensus 141 ~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l~E 204 (343)
.|||.|+...-.++++ .-.+.++.||+...+.=.....++....+-...+|+++-=++|..+.|
T Consensus 38 ~WC~pCr~~~P~l~~l~~~~~~~v~fv~Vdvd~~~~w~d~~~~~~~~~~I~~~iPT~~~~~~~~~l~~ 105 (119)
T cd02952 38 SWCPDCVKAEPVVREALKAAPEDCVFIYCDVGDRPYWRDPNNPFRTDPKLTTGVPTLLRWKTPQRLVE 105 (119)
T ss_pred CCCHhHHhhchhHHHHHHHCCCCCEEEEEEcCCcccccCcchhhHhccCcccCCCEEEEEcCCceecc
Confidence 6999999776555443 323555666642100000112243322221136999864333444433
No 284
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=38.13 E-value=38 Score=26.83 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=32.9
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhh
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDIT 305 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~ 305 (343)
+|....|++|+++++.|+..+.+|..+++.+.....+++.++.
T Consensus 3 iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~~l~~~~ 45 (105)
T cd02977 3 IYGNPNCSTSRKALAWLEEHGIEYEFIDYLKEPPTKEELKELL 45 (105)
T ss_pred EEECCCCHHHHHHHHHHHHcCCCcEEEeeccCCCCHHHHHHHH
Confidence 4566789999999999999998999888866444455566665
No 285
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=38.11 E-value=1.7e+02 Score=21.95 Aligned_cols=58 Identities=10% Similarity=0.112 Sum_probs=32.7
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCC----CeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCe
Q 019273 135 LQLFEFEACPFCRRVREAITELDL----SVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGV 200 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl----~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~ 200 (343)
+..|+.++|+.|+...-.++++.- .+.+..||. . ..++...+. +-..+|+++--.+|.
T Consensus 16 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~---~----~~~~l~~~~-~i~~~Pt~~~~~~g~ 77 (96)
T cd02956 16 VVDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNC---D----AQPQIAQQF-GVQALPTVYLFAAGQ 77 (96)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEec---c----CCHHHHHHc-CCCCCCEEEEEeCCE
Confidence 445566899999988766665432 344455553 1 123444233 355789986322454
No 286
>PRK10824 glutaredoxin-4; Provisional
Probab=37.19 E-value=59 Score=26.85 Aligned_cols=48 Identities=10% Similarity=0.060 Sum_probs=35.7
Q ss_pred CCChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEE
Q 019273 267 ENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLI 314 (343)
Q Consensus 267 ~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~ 314 (343)
+.||||+.+++.|..++.+|-..++.++.--+.++-.+.+...+|-++
T Consensus 28 p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~~TVPQIF 75 (115)
T PRK10824 28 PSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANWPTFPQLW 75 (115)
T ss_pred CCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCCCCCCeEE
Confidence 379999999999999988877666654433344466666888899876
No 287
>cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol.
Probab=36.78 E-value=1e+02 Score=23.99 Aligned_cols=54 Identities=19% Similarity=0.252 Sum_probs=30.9
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcC------C----CeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEc
Q 019273 134 RLQLFEFEACPFCRRVREAITELD------L----SVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLID 195 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elg------l----~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd 195 (343)
-+..|+.++|+.|+...-.++++- . ...+..||. .+ .++.. +..+-..+|.|+-
T Consensus 21 vlv~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~---d~----~~~l~-~~~~v~~~Ptl~~ 84 (108)
T cd02996 21 VLVNFYADWCRFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDC---DK----ESDIA-DRYRINKYPTLKL 84 (108)
T ss_pred EEEEEECCCCHHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEEC---CC----CHHHH-HhCCCCcCCEEEE
Confidence 355667789999998876665431 1 133334442 21 23444 3444668898853
No 288
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=36.64 E-value=1.6e+02 Score=22.46 Aligned_cols=53 Identities=17% Similarity=0.272 Sum_probs=29.9
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCC----eEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLS----VEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~----ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
-+..|+.++|+.|+...-.++++.-. +.+..||. .+ .++.. +...-..+|.++
T Consensus 21 ~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~---~~----~~~~~-~~~~v~~~Pt~~ 77 (101)
T cd03003 21 WFVNFYSPRCSHCHDLAPTWREFAKEMDGVIRIGAVNC---GD----DRMLC-RSQGVNSYPSLY 77 (101)
T ss_pred EEEEEECCCChHHHHhHHHHHHHHHHhcCceEEEEEeC---Cc----cHHHH-HHcCCCccCEEE
Confidence 35566778999998876655544222 34444443 22 23433 333356889884
No 289
>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein. Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which
Probab=36.26 E-value=59 Score=25.40 Aligned_cols=57 Identities=11% Similarity=0.111 Sum_probs=31.3
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCC-----eEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCe
Q 019273 135 LQLFEFEACPFCRRVREAITELDLS-----VEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGV 200 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~-----ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~ 200 (343)
+..|+.++|+.|+...-.++.+--. ..+..+|. + ..+.. +...-..+|+++--.+|.
T Consensus 21 vv~F~a~wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~------d--~~~~~-~~~~v~~~Pt~~~~~~g~ 82 (102)
T cd02948 21 VVDVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEA------D--TIDTL-KRYRGKCEPTFLFYKNGE 82 (102)
T ss_pred EEEEECCcCHhHHHHhHHHHHHHHHcCCCcEEEEEEeC------C--CHHHH-HHcCCCcCcEEEEEECCE
Confidence 4566678999999887666554211 33334442 1 22333 334466788774322454
No 290
>cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein. MPD1 has been shown to suppress the maturation defect of carboxypeptidase Y caused by deletion of the yeast PDI1 gene. Other characterized members of this subfamily include the Aspergillus niger prpA protein and Giardia PDI-1. PrpA is non-essential to strain viability, however, its transcript level is induced by heterologous protein expression suggesting a possible role in oxidative protein folding during high protein production. Giardia PDI-1 has the ability to refold scrambled RNase and exhibits transglutaminase activity.
Probab=36.13 E-value=1.7e+02 Score=22.56 Aligned_cols=55 Identities=18% Similarity=0.272 Sum_probs=30.6
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 134 RLQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
.+..|+.++|+.|+...-.++++ +-.+.+..+|. ... ..++.. ....-..+|.++
T Consensus 21 ~lv~f~a~wC~~C~~~~~~~~~~a~~~~~~~~~~~v~~---~~~--~~~~~~-~~~~i~~~Pt~~ 79 (109)
T cd03002 21 TLVEFYAPWCGHCKNLKPEYAKAAKELDGLVQVAAVDC---DED--KNKPLC-GKYGVQGFPTLK 79 (109)
T ss_pred EEEEEECCCCHHHHhhChHHHHHHHHhcCCceEEEEec---Ccc--ccHHHH-HHcCCCcCCEEE
Confidence 46677778999998876555444 22233444442 221 123444 333456789875
No 291
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=35.92 E-value=60 Score=23.86 Aligned_cols=22 Identities=23% Similarity=0.531 Sum_probs=17.9
Q ss_pred EEEEEeCCChhHHHHHHHHHHc
Q 019273 135 LQLFEFEACPFCRRVREAITEL 156 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~el 156 (343)
+.+|.-+.||+|....-.++++
T Consensus 1 i~~f~d~~Cp~C~~~~~~l~~~ 22 (98)
T cd02972 1 IVEFFDPLCPYCYLFEPELEKL 22 (98)
T ss_pred CeEEECCCCHhHHhhhHHHHHH
Confidence 3577888999999988888775
No 292
>cd03000 PDI_a_TMX3 PDIa family, TMX3 subfamily; composed of eukaryotic proteins similar to human TMX3, a TRX related transmembrane protein containing one redox active TRX domain at the N-terminus and a classical ER retrieval sequence for type I transmembrane proteins at the C-terminus. The TMX3 transcript is found in a variety of tissues with the highest levels detected in skeletal muscle and the heart. In vitro, TMX3 showed oxidase activity albeit slightly lower than that of protein disulfide isomerase.
Probab=35.55 E-value=1.8e+02 Score=22.47 Aligned_cols=54 Identities=15% Similarity=0.144 Sum_probs=29.3
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc-------CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEc
Q 019273 134 RLQLFEFEACPFCRRVREAITEL-------DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLID 195 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el-------gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd 195 (343)
-+..|+.++||.|++..-.++++ +..+....+|. .. .++.. +...-..+|.++-
T Consensus 18 vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~vd~---~~----~~~~~-~~~~I~~~Pt~~l 78 (104)
T cd03000 18 WLVDFYAPWCGHCKKLEPVWNEVGAELKSSGSPVRVGKLDA---TA----YSSIA-SEFGVRGYPTIKL 78 (104)
T ss_pred EEEEEECCCCHHHHhhChHHHHHHHHHHhcCCcEEEEEEEC---cc----CHhHH-hhcCCccccEEEE
Confidence 35566678999998766444332 33344444442 11 23333 3334567898854
No 293
>PRK03147 thiol-disulfide oxidoreductase; Provisional
Probab=35.15 E-value=1.1e+02 Score=25.95 Aligned_cols=19 Identities=16% Similarity=0.162 Sum_probs=12.4
Q ss_pred EEEEEeCCChhHHHHHHHH
Q 019273 135 LQLFEFEACPFCRRVREAI 153 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L 153 (343)
+..|...+||.|+...-.+
T Consensus 65 ~l~f~a~~C~~C~~~~~~l 83 (173)
T PRK03147 65 FLNFWGTWCKPCEKEMPYM 83 (173)
T ss_pred EEEEECCcCHHHHHHHHHH
Confidence 3444567999998754433
No 294
>KOG2501 consensus Thioredoxin, nucleoredoxin and related proteins [General function prediction only]
Probab=34.58 E-value=1.1e+02 Score=26.85 Aligned_cols=35 Identities=20% Similarity=0.366 Sum_probs=24.8
Q ss_pred CcEEEEE-eCCChhHHH-------HHHHHHHcCCCeEEEEeee
Q 019273 133 TRLQLFE-FEACPFCRR-------VREAITELDLSVEWMYEQV 167 (343)
Q Consensus 133 ~~l~LY~-~~~~P~~~r-------vr~~L~elgl~ye~~~vdl 167 (343)
+-+.||. ..+||.||- +-..++..+-++|++.|+-
T Consensus 34 KvV~lyFsA~wC~pCR~FTP~Lk~fYe~l~~~~~~fEVvfVS~ 76 (157)
T KOG2501|consen 34 KVVGLYFSAHWCPPCRDFTPILKDFYEELKDNAAPFEVVFVSS 76 (157)
T ss_pred cEEEEEEEEEECCchhhCCchHHHHHHHHHhcCCceEEEEEec
Confidence 4566775 468999963 4456666677899998874
No 295
>cd02985 TRX_CDSP32 TRX family, chloroplastic drought-induced stress protein of 32 kD (CDSP32); CDSP32 is composed of two TRX domains, a C-terminal TRX domain which contains a redox active CXXC motif and an N-terminal TRX-like domain which contains an SXXS sequence instead of the redox active motif. CDSP32 is a stress-inducible TRX, i.e., it acts as a TRX by reducing protein disulfides and is induced by environmental and oxidative stress conditions. It plays a critical role in plastid defense against oxidative damage, a role related to its function as a physiological electron donor to BAS1, a plastidic 2-cys peroxiredoxin. Plants lacking CDSP32 exhibit decreased photosystem II photochemical efficiencies and chlorophyll retention compared to WT controls, as well as an increased proportion of BAS1 in its overoxidized monomeric form.
Probab=34.48 E-value=65 Score=25.24 Aligned_cols=62 Identities=11% Similarity=0.127 Sum_probs=32.6
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCC---CeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee
Q 019273 135 LQLFEFEACPFCRRVREAITELDL---SVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS 201 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl---~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~ 201 (343)
+..|+.++|+.|+...-.++++.- ...+..||. .+ .....++. +...-..+|+++--.+|..
T Consensus 19 vv~F~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~---d~-~~~~~~l~-~~~~V~~~Pt~~~~~~G~~ 83 (103)
T cd02985 19 VLEFALKHSGPSVKIYPTMVKLSRTCNDVVFLLVNG---DE-NDSTMELC-RREKIIEVPHFLFYKDGEK 83 (103)
T ss_pred EEEEECCCCHhHHHHhHHHHHHHHHCCCCEEEEEEC---CC-ChHHHHHH-HHcCCCcCCEEEEEeCCeE
Confidence 445566899999877766655422 233444442 11 11123444 3334556887754334653
No 296
>TIGR01126 pdi_dom protein disulfide-isomerase domain. This model describes a domain of eukaryotic protein disulfide isomerases, generally found in two copies. The high cutoff for total score reflects the expectation of finding both copies. The domain is similar to thioredoxin but the redox-active disulfide region motif is APWCGHCK.
Probab=34.01 E-value=68 Score=24.21 Aligned_cols=52 Identities=15% Similarity=0.255 Sum_probs=29.9
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCC------eEEEEeeeecCCCCCcccHHHHHhhCCCceeeEE
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLS------VEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFL 193 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~------ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~L 193 (343)
.+.+|+.++|+.|+.....++...-. +.+..+|. . ..++.. +.-+-..+|.+
T Consensus 16 ~~i~f~~~~C~~c~~~~~~~~~~~~~~~~~~~~~~~~~d~---~----~~~~~~-~~~~i~~~P~~ 73 (102)
T TIGR01126 16 VLVEFYAPWCGHCKNLAPEYEKLAKELKGDPDIVLAKVDA---T----AEKDLA-SRFGVSGFPTI 73 (102)
T ss_pred EEEEEECCCCHHHHhhChHHHHHHHHhccCCceEEEEEEc---c----chHHHH-HhCCCCcCCEE
Confidence 47788889999999866555443222 33333332 1 223444 33345679988
No 297
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=33.71 E-value=2.3e+02 Score=29.83 Aligned_cols=55 Identities=9% Similarity=0.212 Sum_probs=30.6
Q ss_pred EEEEEeCCChhHHHHHH-------HHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 135 LQLFEFEACPFCRRVRE-------AITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~-------~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
+.-|+.++|+.|+.... +.++++ .+....+|+. +.+...++...+. ...-+|+++
T Consensus 478 lVdF~A~WC~~Ck~~e~~~~~~~~v~~~l~-~~~~v~vDvt---~~~~~~~~l~~~~-~v~g~Pt~~ 539 (571)
T PRK00293 478 MLDLYADWCVACKEFEKYTFSDPQVQQALA-DTVLLQADVT---ANNAEDVALLKHY-NVLGLPTIL 539 (571)
T ss_pred EEEEECCcCHhHHHHHHHhcCCHHHHHHhc-CCEEEEEECC---CCChhhHHHHHHc-CCCCCCEEE
Confidence 33456789999987532 223333 4666667752 2222334555333 455688874
No 298
>PTZ00443 Thioredoxin domain-containing protein; Provisional
Probab=33.48 E-value=2.9e+02 Score=25.47 Aligned_cols=77 Identities=16% Similarity=0.232 Sum_probs=42.7
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeee------c
Q 019273 134 RLQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSM------Y 203 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l------~ 203 (343)
-+..|+.++|+.|+...-.++++ +-...+..+|. . ..++.. +.-.-..+|.++-=++|..+ .
T Consensus 55 vlV~FyApWC~~Ck~~~P~~e~la~~~~~~v~~~~VD~---~----~~~~l~-~~~~I~~~PTl~~f~~G~~v~~~~G~~ 126 (224)
T PTZ00443 55 WFVKFYAPWCSHCRKMAPAWERLAKALKGQVNVADLDA---T----RALNLA-KRFAIKGYPTLLLFDKGKMYQYEGGDR 126 (224)
T ss_pred EEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEecC---c----ccHHHH-HHcCCCcCCEEEEEECCEEEEeeCCCC
Confidence 35566778999998776655543 21233333332 1 123444 33345678987532235432 2
Q ss_pred CHHHHHHHHhhhcCC
Q 019273 204 ESGDIVNYLFQQYGK 218 (343)
Q Consensus 204 ES~aI~~YL~~~y~~ 218 (343)
...+|.+|+.+.|..
T Consensus 127 s~e~L~~fi~~~~~~ 141 (224)
T PTZ00443 127 STEKLAAFALGDFKK 141 (224)
T ss_pred CHHHHHHHHHHHHHh
Confidence 456778888877754
No 299
>PF13728 TraF: F plasmid transfer operon protein
Probab=33.00 E-value=2.1e+02 Score=26.11 Aligned_cols=64 Identities=27% Similarity=0.425 Sum_probs=35.1
Q ss_pred cEEEEEeCCChhHHHHH----HHHHHcCCCeEEEEeeeecCCC--CCcccHHHHHhhCCCceeeEE--EcCCC
Q 019273 134 RLQLFEFEACPFCRRVR----EAITELDLSVEWMYEQVFPCPK--GSIRHREMVRRLGGKEQFPFL--IDPNT 198 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr----~~L~elgl~ye~~~vdl~~~~~--~~~~~~~~l~~~np~~~VP~L--vd~n~ 198 (343)
.+.++.-..||+|+.-. .+-.+-|+++..+-+|=..++. ..........+++. ..+|+| +++++
T Consensus 123 gL~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp~~~~~~g~~~~l~v-~~~Pal~Lv~~~~ 194 (215)
T PF13728_consen 123 GLFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSFPNPRPDPGQAKRLGV-KVTPALFLVNPNT 194 (215)
T ss_pred EEEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCCCCCCCCHHHHHHcCC-CcCCEEEEEECCC
Confidence 46666667899997654 4445557776665555111000 00112344434554 599988 55544
No 300
>PF08534 Redoxin: Redoxin; InterPro: IPR013740 This redoxin domain is found in peroxiredoxin, thioredoxin and glutaredoxin proteins. Peroxiredoxins (Prxs) constitute a family of thiol peroxidases that reduce hydrogen peroxide, peroxinitrite, and hydroperoxides using a strictly conserved cysteine []. Chloroplast thioredoxin systems in plants regulate the enzymes involved in photosynthetic carbon assimilation []. It is thought that redoxins have a large role to play in anti-oxidant defence. Cadmium-sensitive proteins are also regulated via thioredoxin and glutaredoxin thiol redox systems [].; GO: 0016491 oxidoreductase activity; PDB: 2H30_A 1TP9_A 1Y25_A 1XVQ_A 2B1K_A 2G0F_A 2B1L_B 3K8N_A 1Z5Y_E 3OR5_A ....
Probab=32.87 E-value=2.1e+02 Score=23.43 Aligned_cols=49 Identities=31% Similarity=0.449 Sum_probs=28.6
Q ss_pred CChhHHHHHHHHHHc-----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 142 ACPFCRRVREAITEL-----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 142 ~~P~~~rvr~~L~el-----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
+||.|++-...|.++ +-.++++.|... .+....++..+ ....+|++.|+
T Consensus 40 ~Cp~C~~~~p~l~~l~~~~~~~~v~~v~v~~~----~~~~~~~~~~~--~~~~~~~~~D~ 93 (146)
T PF08534_consen 40 WCPPCRKELPYLNELQEKYKDKGVDVVGVSSD----DDPPVREFLKK--YGINFPVLSDP 93 (146)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTTTCEEEEEEES----SSHHHHHHHHH--TTTTSEEEEET
T ss_pred CCCcchhhhhhHHhhhhhhccCceEEEEeccc----CCHHHHHHHHh--hCCCceEEech
Confidence 799998776555444 334555554431 22335566633 23478999885
No 301
>cd03021 DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase Kappa (GSTK) subfamily; GSTK is a member of the GST family of enzymes which catalyzes the transfer of the thiol of GSH to electrophilic substrates. It is specifically located in the mitochondria and peroxisomes, unlike other members of the canonical GST family, which are mainly cytosolic. The biological substrates of GSTK are not yet known. It is presumed to have a protective role during respiration when large amounts of reactive oxygen species are generated. GSTK has the same general fold as DsbA, consisting of a thioredoxin domain interrupted by an alpha-helical domain and its biological unit is a homodimer. GSTK is closely related to the bacterial enzyme, 2-hydroxychromene-2-carboxylate (HCCA) isomerase. It shows little sequence similarity to the other members of the GST family.
Probab=32.79 E-value=77 Score=28.35 Aligned_cols=34 Identities=9% Similarity=0.194 Sum_probs=23.5
Q ss_pred cEEEEEeCCChhHHHH----HHHHHHcCCCeEEEEeee
Q 019273 134 RLQLFEFEACPFCRRV----REAITELDLSVEWMYEQV 167 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rv----r~~L~elgl~ye~~~vdl 167 (343)
.|.+|.-..||||... ..++...+++++.+.+.+
T Consensus 2 ~Id~~~D~vcPwcylg~~~l~~~~~~~~v~i~~~P~~L 39 (209)
T cd03021 2 KIELYYDVVSPYSYLAFEVLCRYQTAWNVDITYVPVFL 39 (209)
T ss_pred ceEEEEeCCChHHHHHHHHHHHHHHHhCCeEEEEeeeh
Confidence 4788998999999654 444455677777666554
No 302
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=32.74 E-value=43 Score=28.03 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=26.8
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhh
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDIT 305 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~ 305 (343)
.+|....|++|+++++.|+..+.+|-.+++-++...++++.++.
T Consensus 3 ~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~~~~~~~~eL~~~l 46 (131)
T PRK01655 3 TLFTSPSCTSCRKAKAWLEEHDIPFTERNIFSSPLTIDEIKQIL 46 (131)
T ss_pred EEEeCCCChHHHHHHHHHHHcCCCcEEeeccCChhhHHHHHHHH
Confidence 35556677888777777777777776666544333344444443
No 303
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=32.25 E-value=46 Score=26.97 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=31.6
Q ss_pred hhhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhh
Q 019273 262 ELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDIT 305 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~ 305 (343)
.+|....|++|+.+++.|+..+.+|-.+++.+..-.++++.++.
T Consensus 3 ~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~~~~~~~~el~~~~ 46 (115)
T cd03032 3 KLYTSPSCSSCRKAKQWLEEHQIPFEERNLFKQPLTKEELKEIL 46 (115)
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCceEEEecCCCcchHHHHHHHH
Confidence 45666789999999999988888888777755433355566655
No 304
>cd02967 mauD Methylamine utilization (mau) D family; mauD protein is the translation product of the mauD gene found in methylotrophic bacteria, which are able to use methylamine as a sole carbon source and a nitrogen source. mauD is an essential accessory protein for the biosynthesis of methylamine dehydrogenase (MADH), the enzyme that catalyzes the oxidation of methylamine and other primary amines. MADH possesses an alpha2beta2 subunit structure; the alpha subunit is also referred to as the large subunit. Each beta (small) subunit contains a tryptophan tryptophylquinone (TTQ) prosthetic group. Accessory proteins are essential for the proper transport of MADH to the periplasm, TTQ synthesis and the formation of several structural disulfide bonds. Bacterial mutants containing an insertion on the mauD gene were unable to grow on methylamine as a sole carbon source, were found to lack the MADH small subunit and had decreased amounts of the MADH large subunit.
Probab=32.03 E-value=51 Score=25.81 Aligned_cols=22 Identities=27% Similarity=0.727 Sum_probs=14.3
Q ss_pred EEEEEeCCChhHHHHHHHHHHc
Q 019273 135 LQLFEFEACPFCRRVREAITEL 156 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~el 156 (343)
+..|...+||.|+...-.++++
T Consensus 25 vl~F~~~wC~~C~~~~p~l~~~ 46 (114)
T cd02967 25 LLFFLSPTCPVCKKLLPVIRSI 46 (114)
T ss_pred EEEEECCCCcchHhHhHHHHHH
Confidence 3344567899998776555543
No 305
>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library. It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.
Probab=31.86 E-value=1.3e+02 Score=25.95 Aligned_cols=61 Identities=18% Similarity=0.257 Sum_probs=33.9
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCC-----CeEEEEeeeecCCCCCcccHHHHHhhCCC-----ceeeEEEcCCCCeee
Q 019273 135 LQLFEFEACPFCRRVREAITELDL-----SVEWMYEQVFPCPKGSIRHREMVRRLGGK-----EQFPFLIDPNTGVSM 202 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl-----~ye~~~vdl~~~~~~~~~~~~~l~~~np~-----~~VP~Lvd~n~g~~l 202 (343)
+..|+.++||.|+...-.++++-- .+.+..||. .+ .++...+.+-. .++|+++--.+|+.+
T Consensus 51 vV~Fya~wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDv---d~----~~~la~~~~V~~~~~v~~~PT~ilf~~Gk~v 121 (152)
T cd02962 51 LVEFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDI---GR----FPNVAEKFRVSTSPLSKQLPTIILFQGGKEV 121 (152)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHcccCCeEEEEEEC---CC----CHHHHHHcCceecCCcCCCCEEEEEECCEEE
Confidence 566677899999988766655532 245555654 12 22333223321 248988543346544
No 306
>cd03024 DsbA_FrnE DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=31.14 E-value=77 Score=27.65 Aligned_cols=34 Identities=26% Similarity=0.652 Sum_probs=21.3
Q ss_pred EEEEEeCCChhHHHHHH----HHHHc----CCCeEEEEeeee
Q 019273 135 LQLFEFEACPFCRRVRE----AITEL----DLSVEWMYEQVF 168 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~----~L~el----gl~ye~~~vdl~ 168 (343)
|.+|.-..||||..... ++++. ++.++.+.+.+.
T Consensus 1 I~~~~D~~cP~cyl~~~~l~~~~~~~~~~~~~~v~~~p~~L~ 42 (201)
T cd03024 1 IDIWSDVVCPWCYIGKRRLEKALAELGDEVDVEIEWRPFELN 42 (201)
T ss_pred CeEEecCcCccHHHHHHHHHHHHHhCCCCCceEEEEeeeeeC
Confidence 45788888999975544 44454 455565555443
No 307
>PF13462 Thioredoxin_4: Thioredoxin; PDB: 3FEU_A 3HZ8_A 3DVW_A 3A3T_E 3GMF_A 1Z6M_A 3GYK_C 3BCK_A 3BD2_A 3BCI_A ....
Probab=29.74 E-value=60 Score=27.02 Aligned_cols=24 Identities=25% Similarity=0.570 Sum_probs=17.6
Q ss_pred CCCcEEEEEeCCChhHHHHHHHHH
Q 019273 131 SPTRLQLFEFEACPFCRRVREAIT 154 (343)
Q Consensus 131 ~~~~l~LY~~~~~P~~~rvr~~L~ 154 (343)
.+..+++|.-..||+|++....+.
T Consensus 12 a~~~v~~f~d~~Cp~C~~~~~~~~ 35 (162)
T PF13462_consen 12 APITVTEFFDFQCPHCAKFHEELE 35 (162)
T ss_dssp TSEEEEEEE-TTSHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHh
Confidence 344688999999999998765553
No 308
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=29.67 E-value=73 Score=28.76 Aligned_cols=73 Identities=26% Similarity=0.346 Sum_probs=46.0
Q ss_pred hhhccCCChHHHHHHHHHHHhccCccc--ccc---cccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHh
Q 019273 262 ELFSYENNPYARIVREALCELELPYIL--QNV---GDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSY 336 (343)
Q Consensus 262 ~l~~~~~~p~~~~Vr~~L~~Le~pyL~--~~v---Gd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~ 336 (343)
.+|+|=.+.-..+||.+|...+.+|-. .|+ |++++ .++-.+.+...+|.|.. .|..+.++-+|..|++.+|
T Consensus 7 iLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~--~ef~~iNPm~kVP~L~i--~g~tl~eS~AII~YLeEt~ 82 (217)
T KOG0868|consen 7 ILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSD--SEFKEINPMEKVPTLVI--DGLTLTESLAIIEYLEETY 82 (217)
T ss_pred hhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhh--hHHhhcCchhhCCeEEE--CCEEeehHHHHHHHHHhcC
Confidence 455552333345677777766664432 221 24442 23555666778998874 3667899999999999988
Q ss_pred cC
Q 019273 337 SA 338 (343)
Q Consensus 337 ~~ 338 (343)
..
T Consensus 83 P~ 84 (217)
T KOG0868|consen 83 PD 84 (217)
T ss_pred CC
Confidence 64
No 309
>PLN02309 5'-adenylylsulfate reductase
Probab=28.86 E-value=1.3e+02 Score=30.89 Aligned_cols=56 Identities=21% Similarity=0.372 Sum_probs=31.5
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc-----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEc
Q 019273 134 RLQLFEFEACPFCRRVREAITEL-----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLID 195 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el-----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd 195 (343)
-+..|+.++|++|+...-.++++ +-.+.+..||. . +. ..+...+...-..+|+++.
T Consensus 368 vlV~FyApWC~~Cq~m~p~~e~LA~~~~~~~V~f~kVD~---d-~~--~~~la~~~~~I~~~PTil~ 428 (457)
T PLN02309 368 WLVVLYAPWCPFCQAMEASYEELAEKLAGSGVKVAKFRA---D-GD--QKEFAKQELQLGSFPTILL 428 (457)
T ss_pred EEEEEECCCChHHHHHHHHHHHHHHHhccCCeEEEEEEC---C-Cc--chHHHHhhCCCceeeEEEE
Confidence 46677889999998776555544 22344444442 1 11 1233312234568898854
No 310
>cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains. Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in vivo. It has been detected in many tissues, however, transcript and protein levels do not correlate in all tissues, suggesting regulation at a posttranscriptional level. An identical protein, named endoPDI, has been identified as an endothelial PDI that is highly expressed in the endothelium of tumors and hypoxic lesions. It has a protective effect on cells exposed to hypoxia.
Probab=27.76 E-value=2.3e+02 Score=21.32 Aligned_cols=53 Identities=21% Similarity=0.301 Sum_probs=29.3
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc-----C--CCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 134 RLQLFEFEACPFCRRVREAITEL-----D--LSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el-----g--l~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
.+..|+.++|+.|+...-.++++ + ..+.+..||. .+. .+.. +.-.-..+|.++
T Consensus 19 ~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~---~~~----~~~~-~~~~v~~~Pt~~ 78 (102)
T cd03005 19 HFVKFFAPWCGHCKRLAPTWEQLAKKFNNENPSVKIAKVDC---TQH----RELC-SEFQVRGYPTLL 78 (102)
T ss_pred EEEEEECCCCHHHHHhCHHHHHHHHHHhccCCcEEEEEEEC---CCC----hhhH-hhcCCCcCCEEE
Confidence 56677788999999765544333 2 1344455542 221 2333 223346789874
No 311
>cd02998 PDI_a_ERp38 PDIa family, endoplasmic reticulum protein 38 (ERp38) subfamily; composed of proteins similar to the P5-like protein first isolated from alfalfa, which contains two redox active TRX (a) domains at the N-terminus, like human P5, and a C-terminal domain with homology to the C-terminal domain of ERp29, unlike human P5. The cDNA clone of this protein (named G1) was isolated from an alfalfa cDNA library by screening with human protein disulfide isomerase (PDI) cDNA. The G1 protein is constitutively expressed in all major organs of the plant and its expression is induced by treatment with tunicamycin, indicating that it may be a glucose-regulated protein. The G1 homolog in the eukaryotic social amoeba Dictyostelium discoideum is also described as a P5-like protein, which is located in the endoplasmic reticulum (ER) despite the absence of an ER-retrieval signal. G1 homologs from Aspergillus niger and Neurospora crassa have also been characterized, and are named TIGA and ER
Probab=27.51 E-value=99 Score=23.42 Aligned_cols=54 Identities=19% Similarity=0.319 Sum_probs=30.1
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc----C--CCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 134 RLQLFEFEACPFCRRVREAITEL----D--LSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el----g--l~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
.+..|+.++|+.|+...-.++++ . -.+....+|. .+. .++...+. +-..+|+++
T Consensus 21 ~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~---~~~---~~~~~~~~-~i~~~P~~~ 80 (105)
T cd02998 21 VLVEFYAPWCGHCKNLAPEYEKLAAVFANEDDVVIAKVDA---DEA---NKDLAKKY-GVSGFPTLK 80 (105)
T ss_pred EEEEEECCCCHHHHhhChHHHHHHHHhCCCCCEEEEEEEC---CCc---chhhHHhC-CCCCcCEEE
Confidence 46677789999998665444432 2 2355555553 220 23334233 345789885
No 312
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=27.31 E-value=16 Score=38.06 Aligned_cols=96 Identities=16% Similarity=0.208 Sum_probs=54.3
Q ss_pred CeeecCHHHHHHHHhhhcCC-CCCCCCCHHHHHHHHhhhhHHHhhccchhhhhhcCCCCCcchhhhhccCCChHHHHHHH
Q 019273 199 GVSMYESGDIVNYLFQQYGK-GRSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNPYARIVRE 277 (343)
Q Consensus 199 g~~l~ES~aI~~YL~~~y~~-~~~~p~~~~era~v~~Wl~~~~~~~~g~~~~~~~~~~~p~~~l~l~~~~~~p~~~~Vr~ 277 (343)
|..+..+..++.|.+..-.. ..+.+.. .++.+++.|+.+... + . +..+..
T Consensus 45 ~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~--~---------~-----------------~~~~s~ 95 (712)
T KOG1147|consen 45 GRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSST--F---------S-----------------FDEISS 95 (712)
T ss_pred cccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhh--c---------c-----------------hHHHHH
Confidence 55666666677776532211 1122333 568999999986432 0 0 011233
Q ss_pred HHHHhcc-----CcccccccccCCccchhHhhhCCCeEeEEEcC-CCCCC---CCChHHHHHHHH
Q 019273 278 ALCELEL-----PYILQNVGDGSSRTKLLVDITGSKEVPYLIDP-NTSTQ---IGDYKKILSYLF 333 (343)
Q Consensus 278 ~L~~Le~-----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~-~~g~~---l~e~p~I~awl~ 333 (343)
.+.+|+. .|| +|..+| +||.+ ++..+... ..... ...+.+|.+|++
T Consensus 96 ~~~~ld~~l~~~t~l---vg~sls----~Ad~a---iw~~l~~n~~~~~~lk~~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 96 SLSELDKFLVLRTFL---VGNSLS----IADFA---IWGALHSNGMRQEQLKAKKDYQNVERWYD 150 (712)
T ss_pred HHHHHHhhhhHHHHh---hccchh----HHHHH---HHHHHhcccchHHHHHhhCCchhhhhhcC
Confidence 3333333 899 999999 99999 66554311 01111 346778888876
No 313
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=27.06 E-value=1e+02 Score=28.10 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHhccCcccccccccCCccchhHhhhCCCeEeEEEcCCCCCCCCChHHHHHHHHHHhc
Q 019273 270 PYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILSYLFQSYS 337 (343)
Q Consensus 270 p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~~~~p~L~~~~~g~~l~e~p~I~awl~r~~~ 337 (343)
-.+..+|-.|...+.+|-...+...-. -.++=|-.+..++|++... |..+.++.+|.+|+.|.++
T Consensus 13 G~ae~iR~lf~~a~v~fEd~r~~~~~~-w~~~K~~~pfgqlP~l~vD--g~~i~QS~AI~RyLArk~g 77 (206)
T KOG1695|consen 13 GLAEPIRLLFAYAGVSFEDKRITMEDA-WEELKDKMPFGQLPVLEVD--GKKLVQSRAILRYLARKFG 77 (206)
T ss_pred hhHHHHHHHHHhcCCCcceeeeccccc-hhhhcccCCCCCCCEEeEC--CEeeccHHHHHHHHHHHhC
Confidence 345557777777777666433321110 0012233466689987632 7779999999999999987
No 314
>cd03022 DsbA_HCCA_Iso DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway. It converts HCCA, a hemiketal formed spontaneously after ring cleavage of 1,2-dihydroxynapthalene by a dioxygenase, into cis-o-hydroxybenzylidenepyruvate (cHBPA). This is the fourth reaction in a six-step pathway that converts napthalene into salicylate. HCCA isomerase is unique to bacteria that degrade polycyclic aromatic compounds. It is closely related to the eukaryotic protein, GSH transferase kappa (GSTK).
Probab=26.77 E-value=90 Score=26.88 Aligned_cols=31 Identities=10% Similarity=0.157 Sum_probs=19.7
Q ss_pred EEEEEeCCChhHHHHHHHHH----HcCCCeEEEEe
Q 019273 135 LQLFEFEACPFCRRVREAIT----ELDLSVEWMYE 165 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~----elgl~ye~~~v 165 (343)
+.+|.-..||||......|+ +.+++++.+.+
T Consensus 1 i~~~~D~~cP~cy~~~~~l~~~~~~~~~~i~~~p~ 35 (192)
T cd03022 1 IDFYFDFSSPYSYLAHERLPALAARHGATVRYRPI 35 (192)
T ss_pred CeEEEeCCChHHHHHHHHHHHHHHHhCCeeEEeee
Confidence 45788888999976544443 45666564443
No 315
>cd03008 TryX_like_RdCVF Tryparedoxin (TryX)-like family, Rod-derived cone viability factor (RdCVF) subfamily; RdCVF is a thioredoxin (TRX)-like protein specifically expressed in photoreceptors. RdCVF was isolated and identified as a factor that supports cone survival in retinal cultures. Cone photoreceptor loss is responsible for the visual handicap resulting from the inherited disease, retinitis pigmentosa. RdCVF shows 33% similarity to TRX but does not exhibit any detectable thiol oxidoreductase activity.
Probab=26.44 E-value=4.1e+02 Score=22.70 Aligned_cols=45 Identities=13% Similarity=0.332 Sum_probs=25.8
Q ss_pred cEEEE-EeCCChhHHHHHHHHHHc------------CCCeEEEEeeeecCCCCCcccHHHH
Q 019273 134 RLQLF-EFEACPFCRRVREAITEL------------DLSVEWMYEQVFPCPKGSIRHREMV 181 (343)
Q Consensus 134 ~l~LY-~~~~~P~~~rvr~~L~el------------gl~ye~~~vdl~~~~~~~~~~~~~l 181 (343)
.+.|| ...+||.|++..-.|.++ +-.++++.|+. ....+...+|+
T Consensus 27 ~vlL~FwAsWCppCr~e~P~L~~ly~~~~~~~~~~~~~~~~vV~Vs~---D~~~~~~~~f~ 84 (146)
T cd03008 27 VLLLFFGAVVSPQCQLFAPKLKDFFVRLTDEFYVDRSAQLALVYVSM---DQSEQQQESFL 84 (146)
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHHHhhcccccCCCEEEEEEEC---CCCHHHHHHHH
Confidence 34444 456899999887666552 12467666663 22223345666
No 316
>PF14595 Thioredoxin_9: Thioredoxin; PDB: 1Z6N_A.
Probab=26.36 E-value=25 Score=29.53 Aligned_cols=56 Identities=13% Similarity=0.167 Sum_probs=27.1
Q ss_pred CcEEEEEeCCChhHHHHHHH----HHHc-CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEc
Q 019273 133 TRLQLFEFEACPFCRRVREA----ITEL-DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLID 195 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~----L~el-gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd 195 (343)
..+.++.-.|||-|++..-+ +++. ++++.++..|- .......++ . ++...||+++.
T Consensus 43 ~~ilvi~e~WCgD~~~~vP~l~kiae~~p~i~~~~i~rd~-----~~el~~~~l-t-~g~~~IP~~I~ 103 (129)
T PF14595_consen 43 YNILVITETWCGDCARNVPVLAKIAEANPNIEVRIILRDE-----NKELMDQYL-T-NGGRSIPTFIF 103 (129)
T ss_dssp EEEEEE--TT-HHHHHHHHHHHHHHHH-TTEEEEEE-HHH-----HHHHTTTTT-T--SS--SSEEEE
T ss_pred cEEEEEECCCchhHHHHHHHHHHHHHhCCCCeEEEEEecC-----ChhHHHHHH-h-CCCeecCEEEE
Confidence 35777888899999775533 3333 56666443331 111222333 3 77889999964
No 317
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=26.35 E-value=1e+02 Score=26.62 Aligned_cols=33 Identities=12% Similarity=0.303 Sum_probs=27.2
Q ss_pred CcEEEEEeCCChhHHHHHHHHHHcCCCeEEEEe
Q 019273 133 TRLQLFEFEACPFCRRVREAITELDLSVEWMYE 165 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~v 165 (343)
..+..|..|.|.+|+.-...|+.+|..+..+..
T Consensus 26 ~~~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~ 58 (149)
T COG3019 26 TEMVVYKSPNCGCCDEWAQHMKANGFEVKVVET 58 (149)
T ss_pred eeEEEEeCCCCccHHHHHHHHHhCCcEEEEeec
Confidence 358899999999999999999999977765443
No 318
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=24.38 E-value=1.3e+02 Score=26.95 Aligned_cols=22 Identities=27% Similarity=0.771 Sum_probs=15.5
Q ss_pred EEEEEeCCChhHHHHHHHHHHc
Q 019273 135 LQLFEFEACPFCRRVREAITEL 156 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~el 156 (343)
+..|...+||+|++..-.|..+
T Consensus 73 lV~FwaswCp~C~~e~P~L~~l 94 (181)
T PRK13728 73 VVLFMQGHCPYCHQFDPVLKQL 94 (181)
T ss_pred EEEEECCCCHhHHHHHHHHHHH
Confidence 6667778999999875444443
No 319
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=23.82 E-value=1.2e+02 Score=22.77 Aligned_cols=23 Identities=30% Similarity=0.407 Sum_probs=15.9
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc
Q 019273 134 RLQLFEFEACPFCRRVREAITEL 156 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el 156 (343)
.+..|...+||.|++..-.+.++
T Consensus 22 ~ll~f~~~~C~~C~~~~~~l~~~ 44 (116)
T cd02966 22 VLVNFWASWCPPCRAEMPELEAL 44 (116)
T ss_pred EEEEeecccChhHHHHhHHHHHH
Confidence 45566677999998766555554
No 320
>PRK15412 thiol:disulfide interchange protein DsbE; Provisional
Probab=23.69 E-value=2.3e+02 Score=24.78 Aligned_cols=55 Identities=15% Similarity=0.219 Sum_probs=27.6
Q ss_pred EEEeCCChhHHHHHHHHHHcC-CCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeE-EEcC
Q 019273 137 LFEFEACPFCRRVREAITELD-LSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPF-LIDP 196 (343)
Q Consensus 137 LY~~~~~P~~~rvr~~L~elg-l~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~-Lvd~ 196 (343)
.|...+||.|++-.-.|.++. ..++++-|+.. .......++. +.++. ..|+ +.|+
T Consensus 74 ~FwatwC~~C~~e~p~l~~l~~~~~~vi~v~~~---~~~~~~~~~~-~~~~~-~~~~~~~D~ 130 (185)
T PRK15412 74 NVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYK---DDRQKAISWL-KELGN-PYALSLFDG 130 (185)
T ss_pred EEECCCCHHHHHHHHHHHHHHHcCCEEEEEECC---CCHHHHHHHH-HHcCC-CCceEEEcC
Confidence 344569999988665554442 23455555431 1222344555 33332 4554 5554
No 321
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=23.44 E-value=79 Score=25.62 Aligned_cols=43 Identities=19% Similarity=0.312 Sum_probs=29.5
Q ss_pred hhccCCChHHHHHHHHHHHhccCcccccccccCCccchhHhhh
Q 019273 263 LFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDIT 305 (343)
Q Consensus 263 l~~~~~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~ 305 (343)
+|....|++|+.+++.|++.+.+|-.+++-+..-.++++.++.
T Consensus 3 iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~~l~ 45 (117)
T TIGR01617 3 VYGSPNCTTCKKARRWLEANGIEYQFIDIGEDGPTREELLDIL 45 (117)
T ss_pred EEeCCCCHHHHHHHHHHHHcCCceEEEecCCChhhHHHHHHHH
Confidence 4556789999999999988888888777654332344455444
No 322
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=22.71 E-value=1.2e+02 Score=26.20 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=37.5
Q ss_pred CChHHHHHHHHHHHhccCcccccccccCCccchhHhhhCC----CeEeEEE
Q 019273 268 NNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGS----KEVPYLI 314 (343)
Q Consensus 268 ~~p~~~~Vr~~L~~Le~pyL~~~vGd~~T~~~~lADi~g~----~~~p~L~ 314 (343)
..|++..++..|+.+..+|.++++..+...+++|.++.+. ..+|.++
T Consensus 15 t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~~tvPqVF 65 (147)
T cd03031 15 TFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVSLPRVF 65 (147)
T ss_pred cChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCCCCCCEEE
Confidence 5789999999999999999988887665556677777654 6788876
No 323
>cd03001 PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryotic proteins similar to human P5, a PDI-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain). Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. Some members of this subfamily are P5-like proteins containing only one redox active TRX domain.
Probab=22.59 E-value=3.4e+02 Score=20.37 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=28.7
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE
Q 019273 134 RLQLFEFEACPFCRRVREAITEL----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI 194 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv 194 (343)
-+.+++.++|+.|+...-.+.++ .-.+.+..+|. . ..++...+.+ -..+|+++
T Consensus 21 vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~id~---~----~~~~~~~~~~-i~~~P~~~ 77 (103)
T cd03001 21 WLVEFYAPWCGHCKNLAPEWKKAAKALKGIVKVGAVDA---D----VHQSLAQQYG-VRGFPTIK 77 (103)
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhcCCceEEEEEC---c----chHHHHHHCC-CCccCEEE
Confidence 35566678999998876544432 22244444442 1 1234443444 35689774
No 324
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=22.52 E-value=1.4e+02 Score=23.74 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=33.4
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCC---eEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCeee
Q 019273 135 LQLFEFEACPFCRRVREAITELDLS---VEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVSM 202 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~---ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~l 202 (343)
+..|+.++|+.|+...-.++++--. .....||.. .. +.. +.-.-..+|+++-=.+|..+
T Consensus 28 vv~F~a~~c~~C~~l~~~l~~la~~~~~v~f~~vd~~------~~--~l~-~~~~i~~~Pt~~~f~~G~~v 89 (113)
T cd02957 28 VVHFYEPGFPRCKILDSHLEELAAKYPETKFVKINAE------KA--FLV-NYLDIKVLPTLLVYKNGELI 89 (113)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHCCCcEEEEEEch------hh--HHH-HhcCCCcCCEEEEEECCEEE
Confidence 4556678999999887777654322 233445531 11 222 33345688988543346543
No 325
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=22.49 E-value=2.4e+02 Score=22.04 Aligned_cols=58 Identities=28% Similarity=0.520 Sum_probs=31.3
Q ss_pred CcEEEEEeC--CChhHHHHHHHHHHc-----CCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 133 TRLQLFEFE--ACPFCRRVREAITEL-----DLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 133 ~~l~LY~~~--~~P~~~rvr~~L~el-----gl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
+.+.|+.+. +||.|....-.|.++ ...+.++.|.. .......++..+.+ ..+|++.|.
T Consensus 26 k~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~----d~~~~~~~~~~~~~--~~~~~~~D~ 90 (124)
T PF00578_consen 26 KPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST----DDPEEIKQFLEEYG--LPFPVLSDP 90 (124)
T ss_dssp SEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES----SSHHHHHHHHHHHT--CSSEEEEET
T ss_pred CcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc----ccccchhhhhhhhc--cccccccCc
Confidence 344444443 699998776555543 22345554442 11122344553334 578999885
No 326
>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.
Probab=22.46 E-value=93 Score=24.36 Aligned_cols=23 Identities=30% Similarity=0.495 Sum_probs=17.1
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc
Q 019273 134 RLQLFEFEACPFCRRVREAITEL 156 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el 156 (343)
-+..|+.++|+.|+...-.++++
T Consensus 21 vlV~F~a~WC~~C~~~~p~l~~l 43 (100)
T cd02999 21 TAVLFYASWCPFSASFRPHFNAL 43 (100)
T ss_pred EEEEEECCCCHHHHhHhHHHHHH
Confidence 45666778999999887666554
No 327
>cd03011 TlpA_like_ScsD_MtbDsbE TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.
Probab=22.04 E-value=1.7e+02 Score=23.00 Aligned_cols=59 Identities=20% Similarity=0.304 Sum_probs=30.6
Q ss_pred cEEEEEeCCChhHHHHHHHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcC
Q 019273 134 RLQLFEFEACPFCRRVREAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 196 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~ 196 (343)
.+..|...+||.|+...-.|..+.-.++++.|...+ ...+...++. +..+ ..+|++.|.
T Consensus 23 ~vl~F~~~~C~~C~~~~~~l~~~~~~~~~i~i~~~~--~~~~~~~~~~-~~~~-~~~~~~~d~ 81 (123)
T cd03011 23 VLVYFWATWCPVCRFTSPTVNQLAADYPVVSVALRS--GDDGAVARFM-QKKG-YGFPVINDP 81 (123)
T ss_pred EEEEEECCcChhhhhhChHHHHHHhhCCEEEEEccC--CCHHHHHHHH-HHcC-CCccEEECC
Confidence 344555778999987755555443335544443311 1122333454 3333 367777765
No 328
>PF03884 DUF329: Domain of unknown function (DUF329); InterPro: IPR005584 The biological function of these short proteins is unknown, but they contain four conserved cysteines, suggesting that they all bind zinc. YacG (Q5X8H6 from SWISSPROT) from Escherichia coli has been shown to bind zinc and contains the structural motifs typical of zinc-binding proteins []. The conserved four cysteine motif in these proteins (-C-X(2)-C-X(15)-C-X(3)-C-) is not found in other zinc-binding proteins with known structures.; GO: 0008270 zinc ion binding; PDB: 1LV3_A.
Probab=21.72 E-value=36 Score=24.66 Aligned_cols=44 Identities=25% Similarity=0.421 Sum_probs=26.5
Q ss_pred ceeeeeccCCCCCCCCCccccccCCCccccccccccccCCCCCC
Q 019273 10 QSVLFSSTNPAHNFSSLSHRSSRNGNWVSGRNRLHAKSADPDAG 53 (343)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 53 (343)
..+..+..|+.+-|++-+=+.-.-|.|..+..||.+...+++..
T Consensus 10 k~~~~~~~n~~rPFCS~RCk~iDLg~W~~e~Y~Ip~~~~~~~~~ 53 (57)
T PF03884_consen 10 KPVEWSPENPFRPFCSERCKLIDLGRWANEEYRIPGEPDDEDED 53 (57)
T ss_dssp -EEE-SSSSS--SSSSHHHHHHHHS-SSSSS----SSS-SS-S-
T ss_pred CeecccCCCCcCCcccHhhcccCHHHHhcCCcccCCCCCCcccc
Confidence 45677788888888888888888999999999999988755543
No 329
>cd02958 UAS UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized proteins with similarity to FAS-associated factor 1 (FAF1) and ETEA because of the presence of a UAS domain N-terminal to a ubiquitin-associated UBX domain. FAF1 is a longer protein, compared to the other members of this family, having additional N-terminal domains, a ubiquitin-associated UBA domain and a nuclear targeting domain. FAF1 is an apoptotic signaling molecule that acts downstream in the Fas signal transduction pathway. It interacts with the cytoplasmic domain of Fas, but not to a Fas mutant that is deficient in signal transduction. ETEA is the protein product of a highly expressed gene in T-cells and eosinophils of atopic dermatitis patients. The presence of the ubiquitin-associated UBX domain in the proteins of this family suggests the possibility of their involvement in ubiquitination. Recently, FAF1 has been shown to interact with valosin-containing protein (VCP),
Probab=21.30 E-value=3.8e+02 Score=21.12 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=33.2
Q ss_pred CcEEEE-EeCCChhHHHHH-------HHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEE--EcCCCCe
Q 019273 133 TRLQLF-EFEACPFCRRVR-------EAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFL--IDPNTGV 200 (343)
Q Consensus 133 ~~l~LY-~~~~~P~~~rvr-------~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~L--vd~n~g~ 200 (343)
+.+-+| +.++|++|++.. .+.+.++-.|....+|+. . ....++. ..-+...+|++ +|+.+|.
T Consensus 18 K~llv~~~~~~c~~c~~~~~~vl~~~~v~~~l~~~~v~~~~d~~---~--~e~~~~~-~~~~~~~~P~~~~i~~~~g~ 89 (114)
T cd02958 18 KWLLVYLQSEDEFDSQVLNRDLWSNESVKEFIRENFIFWQCDID---S--SEGQRFL-QSYKVDKYPHIAIIDPRTGE 89 (114)
T ss_pred ceEEEEEecCCcchHHHHHHHHcCCHHHHHHHHhCEEEEEecCC---C--ccHHHHH-HHhCccCCCeEEEEeCccCc
Confidence 445555 457899997742 223333335666666642 1 2233454 44456689988 4442354
No 330
>TIGR00385 dsbE periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily. Involved in the biogenesis of c-type cytochromes as well as in disulfide bond formation in some periplasmic proteins.
Probab=21.19 E-value=2.4e+02 Score=24.22 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=19.1
Q ss_pred EEEEEeCCChhHHHHHHHHHHcC-CCeEEEEee
Q 019273 135 LQLFEFEACPFCRRVREAITELD-LSVEWMYEQ 166 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elg-l~ye~~~vd 166 (343)
+..|...+||.|++..-.++++. -.++++.|+
T Consensus 67 ll~F~a~wC~~C~~~~p~l~~l~~~~~~vi~V~ 99 (173)
T TIGR00385 67 LLNVWASWCPPCRAEHPYLNELAKDGLPIVGVD 99 (173)
T ss_pred EEEEECCcCHHHHHHHHHHHHHHHcCCEEEEEE
Confidence 33445679999988665555441 125555555
No 331
>cd03025 DsbA_FrnE_like DsbA family, FrnE-like subfamily; composed of uncharacterized proteins containing a CXXC motif with similarity to DsbA and FrnE. FrnE is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.
Probab=20.87 E-value=1.5e+02 Score=25.53 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=19.2
Q ss_pred cEEEEEeCCChhHHHHHH----HHHHc--CCCeEEE
Q 019273 134 RLQLFEFEACPFCRRVRE----AITEL--DLSVEWM 163 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~----~L~el--gl~ye~~ 163 (343)
.|.+|.-+.||||....- +.++. +++++.+
T Consensus 2 ~i~~~~D~~cp~c~~~~~~l~~l~~~~~~~~~v~~~ 37 (193)
T cd03025 2 ELYYFIDPLCGWCYGFEPLLEKLKEEYGGGIEVELH 37 (193)
T ss_pred eEEEEECCCCchhhCchHHHHHHHHHhCCCceEEEE
Confidence 377888899999955443 44444 4555544
No 332
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=20.68 E-value=59 Score=27.57 Aligned_cols=56 Identities=25% Similarity=0.173 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhcc----CcccccccccCCccchhHhhhCCCeEeEEE--cCCCCCCCCChHHHHHHHHHHhcCC
Q 019273 272 ARIVREALCELEL----PYILQNVGDGSSRTKLLVDITGSKEVPYLI--DPNTSTQIGDYKKILSYLFQSYSAS 339 (343)
Q Consensus 272 ~~~Vr~~L~~Le~----pyL~~~vGd~~T~~~~lADi~g~~~~p~L~--~~~~g~~l~e~p~I~awl~r~~~~~ 339 (343)
...+...|..|+. +.- ++.++| +-||. +||.|. .-..|+ .=-|+|.+|++++-...
T Consensus 61 i~~l~~~L~~Le~ll~~~~~---~n~~LS----~dDi~---lFp~LR~Ltivkgi--~~P~~V~~Y~~~~s~~t 122 (132)
T PF04399_consen 61 IAELNADLEELEPLLASPNA---VNGELS----IDDII---LFPILRSLTIVKGI--QWPPKVRAYMDRMSKAT 122 (132)
T ss_dssp HHHHHHHHHHHHHH-SCTTB---TTSS------HHHHH---HHHHHHHHCTCTTS-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccc---cCCCCC----HHHHH---HHHHHhhhhhccCC--cCCHHHHHHHHHHHHHc
Confidence 3346666666654 333 556899 99999 899876 222333 23468999999986543
No 333
>PF06110 DUF953: Eukaryotic protein of unknown function (DUF953); InterPro: IPR010357 This family consists of several hypothetical eukaryotic proteins of unknown function that are thioredoxin-like.; PDB: 1V9W_A 1WOU_A.
Probab=20.66 E-value=1.6e+02 Score=24.38 Aligned_cols=62 Identities=19% Similarity=0.252 Sum_probs=27.9
Q ss_pred CCChhHHHHHH----HHHHcCCCeEEEEeeeecCCCCCccc--HHHHHhhCC---CceeeEEEcCCCCeeecCHH
Q 019273 141 EACPFCRRVRE----AITELDLSVEWMYEQVFPCPKGSIRH--REMVRRLGG---KEQFPFLIDPNTGVSMYESG 206 (343)
Q Consensus 141 ~~~P~~~rvr~----~L~elgl~ye~~~vdl~~~~~~~~~~--~~~l~~~np---~~~VP~Lvd~n~g~~l~ES~ 206 (343)
.|||.|+++.- ++....-...++.+.+-+ +..-+. -.|. .+| ...||+|+--+++..|.|..
T Consensus 36 sWCPDC~~aep~v~~~f~~~~~~~~lv~v~VG~--r~~Wkdp~n~fR--~~p~~~l~~IPTLi~~~~~~rL~e~e 106 (119)
T PF06110_consen 36 SWCPDCVAAEPVVEKAFKKAPENARLVYVEVGD--RPEWKDPNNPFR--TDPDLKLKGIPTLIRWETGERLVEEE 106 (119)
T ss_dssp BSSHHHHHHHHHHHHHHHH-STTEEEEEEE-----HHHHC-TTSHHH--H--CC---SSSEEEECTSS-EEEHHH
T ss_pred cccHHHHHHHHHHHHHHHhCCCCceEEEEEcCC--HHHhCCCCCCce--EcceeeeeecceEEEECCCCccchhh
Confidence 38999998874 444433345555544310 000011 1232 222 45699998544455555543
No 334
>cd02995 PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein folding. They are oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. PDI and ERp57 have the abb'a' domain structure (where a and a' are redox active TRX domains while b and b' are redox inactive TRX-like domains). PDI also contains an acidic region (c domain) after the a' domain that is absent in ERp57. ERp72 has an additional a domain at the N-terminus (a"abb'a' domain structure). ERp57 interacts with the lectin chaperones, calnexin and calreticu
Probab=20.50 E-value=1.1e+02 Score=23.25 Aligned_cols=23 Identities=26% Similarity=0.374 Sum_probs=17.0
Q ss_pred cEEEEEeCCChhHHHHHHHHHHc
Q 019273 134 RLQLFEFEACPFCRRVREAITEL 156 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~el 156 (343)
.+.+|+.++|+.|+...-.++++
T Consensus 21 ~~v~f~~~~C~~C~~~~~~~~~~ 43 (104)
T cd02995 21 VLVEFYAPWCGHCKALAPIYEEL 43 (104)
T ss_pred EEEEEECCCCHHHHHHhhHHHHH
Confidence 45667779999998877665544
No 335
>COG2143 Thioredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=20.44 E-value=4.8e+02 Score=23.17 Aligned_cols=16 Identities=38% Similarity=0.914 Sum_probs=12.5
Q ss_pred CcEEEEEeCCChhHHH
Q 019273 133 TRLQLFEFEACPFCRR 148 (343)
Q Consensus 133 ~~l~LY~~~~~P~~~r 148 (343)
..+.++..++|+||.+
T Consensus 44 ylllmfes~~C~yC~~ 59 (182)
T COG2143 44 YLLLMFESNGCSYCER 59 (182)
T ss_pred EEEEEEcCCCChHHHH
Confidence 3567788889999965
No 336
>PF03190 Thioredox_DsbH: Protein of unknown function, DUF255; InterPro: IPR004879 This is a group of uncharacterised proteins.; PDB: 3IRA_A.
Probab=20.43 E-value=65 Score=28.39 Aligned_cols=65 Identities=15% Similarity=0.263 Sum_probs=30.6
Q ss_pred EEEeCCChhHHHHH-------HHHHHcCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEE--cCCCCeee
Q 019273 137 LFEFEACPFCRRVR-------EAITELDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLI--DPNTGVSM 202 (343)
Q Consensus 137 LY~~~~~P~~~rvr-------~~L~elgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lv--d~n~g~~l 202 (343)
-.++.+|.||+... .+.+.++-.|..+.||...-+.-+..+..+...+++.|-.|.-+ +| +|..+
T Consensus 43 ~ig~~~C~wChvM~~esf~d~eVa~~lN~~FI~VkvDree~Pdid~~y~~~~~~~~~~gGwPl~vfltP-dg~p~ 116 (163)
T PF03190_consen 43 SIGYSWCHWCHVMERESFSDPEVAEYLNRNFIPVKVDREERPDIDKIYMNAVQAMSGSGGWPLTVFLTP-DGKPF 116 (163)
T ss_dssp EEE-TT-HHHHHHHHHTTT-HHHHHHHHHH-EEEEEETTT-HHHHHHHHHHHHHHHS---SSEEEEE-T-TS-EE
T ss_pred EEEecCCcchhhhcccCcCCHHHHHHHhCCEEEEEeccccCccHHHHHHHHHHHhcCCCCCCceEEECC-CCCee
Confidence 34578899998765 35666666777777773110000122333333456777778653 45 45544
No 337
>cd03010 TlpA_like_DsbE TlpA-like family, DsbE (also known as CcmG and CycY) subfamily; DsbE is a membrane-anchored, periplasmic TRX-like reductase containing a CXXC motif that specifically donates reducing equivalents to apocytochrome c via CcmH, another cytochrome c maturation (Ccm) factor with a redox active CXXC motif. Assembly of cytochrome c requires the ligation of heme to reduced thiols of the apocytochrome. In bacteria, this assembly occurs in the periplasm. The reductase activity of DsbE in the oxidizing environment of the periplasm is crucial in the maturation of cytochrome c.
Probab=20.42 E-value=2.1e+02 Score=22.78 Aligned_cols=32 Identities=19% Similarity=0.119 Sum_probs=18.8
Q ss_pred EEEEEeCCChhHHHHHHHHHHcCCC--eEEEEee
Q 019273 135 LQLFEFEACPFCRRVREAITELDLS--VEWMYEQ 166 (343)
Q Consensus 135 l~LY~~~~~P~~~rvr~~L~elgl~--ye~~~vd 166 (343)
+..|...+||.|+...-.|+++.-. ++++.|+
T Consensus 29 vv~F~a~~C~~C~~~~~~l~~l~~~~~~~vv~v~ 62 (127)
T cd03010 29 LLNVWASWCAPCREEHPVLMALARQGRVPIYGIN 62 (127)
T ss_pred EEEEEcCcCHHHHHHHHHHHHHHHhcCcEEEEEE
Confidence 4444567899998766555554322 4444443
No 338
>TIGR01130 ER_PDI_fam protein disulfide isomerases, eukaryotic. Members of this family have at least two protein-disulfide domains, each similar to thioredoxin but with the redox-active disulfide in the motif PWCGHCK, and an ER retention signal at the extreme C-terminus (KDEL, HDEL, and similar motifs).
Probab=20.16 E-value=5.7e+02 Score=25.13 Aligned_cols=76 Identities=17% Similarity=0.309 Sum_probs=42.3
Q ss_pred cEEEEEeCCChhHHHHHHHHHH-------cCCCeEEEEeeeecCCCCCcccHHHHHhhCCCceeeEEEcCCCCee-----
Q 019273 134 RLQLFEFEACPFCRRVREAITE-------LDLSVEWMYEQVFPCPKGSIRHREMVRRLGGKEQFPFLIDPNTGVS----- 201 (343)
Q Consensus 134 ~l~LY~~~~~P~~~rvr~~L~e-------lgl~ye~~~vdl~~~~~~~~~~~~~l~~~np~~~VP~Lvd~n~g~~----- 201 (343)
.+.+|+.++|+.|++..-.+.+ .+-.+....|| |.+ ..+...+. +-..+|+++--..|..
T Consensus 21 ~~v~f~a~wC~~c~~~~~~~~~~a~~~~~~~~~v~~~~vd---~~~----~~~l~~~~-~i~~~Pt~~~~~~g~~~~~~~ 92 (462)
T TIGR01130 21 VLVEFYAPWCGHCKSLAPEYEKAADELKKKGPPIKLAKVD---ATE----EKDLAQKY-GVSGYPTLKIFRNGEDSVSDY 92 (462)
T ss_pred EEEEEECCCCHHHHhhhHHHHHHHHHHhhcCCceEEEEEE---CCC----cHHHHHhC-CCccccEEEEEeCCccceeEe
Confidence 4667778999999876543332 22234555554 222 22333233 3456887742212321
Q ss_pred --ecCHHHHHHHHhhhcC
Q 019273 202 --MYESGDIVNYLFQQYG 217 (343)
Q Consensus 202 --l~ES~aI~~YL~~~y~ 217 (343)
.....+|..++.+..+
T Consensus 93 ~g~~~~~~l~~~i~~~~~ 110 (462)
T TIGR01130 93 NGPRDADGIVKYMKKQSG 110 (462)
T ss_pred cCCCCHHHHHHHHHHhcC
Confidence 2467788999987654
Done!