Query 019274
Match_columns 343
No_of_seqs 153 out of 1631
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 13:33:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019274.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019274hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 2E-29 6.9E-34 237.8 28.9 278 6-298 146-425 (425)
2 3nrn_A Uncharacterized protein 99.9 2.6E-25 8.8E-30 209.7 29.7 272 5-306 138-409 (421)
3 1s3e_A Amine oxidase [flavin-c 99.9 1.4E-26 4.9E-31 224.1 18.6 313 7-338 157-489 (520)
4 3nks_A Protoporphyrinogen oxid 99.9 1.3E-25 4.3E-30 215.0 19.1 282 5-299 153-473 (477)
5 4dgk_A Phytoene dehydrogenase; 99.9 7.6E-24 2.6E-28 203.9 26.1 244 52-304 213-495 (501)
6 2yg5_A Putrescine oxidase; oxi 99.9 3.4E-24 1.2E-28 203.8 16.8 278 7-301 157-452 (453)
7 2ivd_A PPO, PPOX, protoporphyr 99.9 1.3E-23 4.5E-28 201.1 20.7 280 5-302 158-475 (478)
8 3i6d_A Protoporphyrinogen oxid 99.9 2E-23 6.8E-28 199.1 16.6 279 4-300 158-468 (470)
9 3lov_A Protoporphyrinogen oxid 99.9 3E-23 1E-27 198.4 15.5 278 5-302 157-467 (475)
10 2vvm_A Monoamine oxidase N; FA 99.9 1.6E-22 5.4E-27 194.5 18.1 277 6-302 199-487 (495)
11 1sez_A Protoporphyrinogen oxid 99.9 8E-23 2.7E-27 196.9 16.0 282 5-302 159-495 (504)
12 1b37_A Protein (polyamine oxid 99.9 3.1E-22 1.1E-26 191.4 15.3 280 12-304 159-462 (472)
13 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 1.2E-20 4.1E-25 172.8 21.2 228 54-299 106-341 (342)
14 4gde_A UDP-galactopyranose mut 99.8 9.7E-21 3.3E-25 182.5 12.9 284 4-299 151-478 (513)
15 4dsg_A UDP-galactopyranose mut 99.8 1.1E-20 3.7E-25 181.0 12.3 280 5-297 146-452 (484)
16 2jae_A L-amino acid oxidase; o 99.8 5.7E-19 1.9E-23 169.4 15.1 235 51-301 230-486 (489)
17 2xag_A Lysine-specific histone 99.8 5.9E-18 2E-22 170.6 20.9 228 53-302 565-831 (852)
18 2z3y_A Lysine-specific histone 99.8 3.7E-18 1.3E-22 169.3 19.0 227 53-301 394-659 (662)
19 2iid_A L-amino-acid oxidase; f 99.8 7.5E-18 2.6E-22 161.9 17.7 234 52-302 233-486 (498)
20 3k7m_X 6-hydroxy-L-nicotine ox 99.8 8.3E-17 2.8E-21 151.7 23.1 258 9-299 154-425 (431)
21 4gut_A Lysine-specific histone 99.7 7.6E-17 2.6E-21 161.5 14.7 229 53-298 527-775 (776)
22 1rsg_A FMS1 protein; FAD bindi 99.7 2.5E-15 8.4E-20 145.1 18.9 240 53-302 196-509 (516)
23 2b9w_A Putative aminooxidase; 99.6 9.3E-16 3.2E-20 144.2 11.0 259 9-297 156-423 (424)
24 3ayj_A Pro-enzyme of L-phenyla 99.6 6E-15 2.1E-19 145.2 15.5 270 28-310 320-689 (721)
25 1yvv_A Amine oxidase, flavin-c 99.6 6.2E-14 2.1E-18 127.4 19.3 218 57-301 107-328 (336)
26 2bcg_G Secretory pathway GDP d 99.3 6.6E-10 2.3E-14 105.3 21.8 66 50-118 232-299 (453)
27 1d5t_A Guanine nucleotide diss 99.1 7.1E-09 2.4E-13 97.6 22.4 91 26-119 198-290 (433)
28 1i8t_A UDP-galactopyranose mut 99.1 2.3E-11 7.7E-16 112.2 4.1 121 5-157 138-260 (367)
29 2bi7_A UDP-galactopyranose mut 99.1 5.9E-11 2E-15 110.0 5.8 116 5-154 142-260 (384)
30 1v0j_A UDP-galactopyranose mut 99.1 4E-12 1.4E-16 118.6 -3.2 123 5-156 148-273 (399)
31 3p1w_A Rabgdi protein; GDI RAB 99.0 6.2E-10 2.1E-14 105.2 9.9 113 2-118 197-313 (475)
32 2e1m_C L-glutamate oxidase; L- 98.8 1.5E-09 5.1E-14 89.5 2.9 97 202-302 48-154 (181)
33 1vg0_A RAB proteins geranylger 98.7 2.1E-07 7.3E-12 90.6 13.3 138 1-158 321-461 (650)
34 3hdq_A UDP-galactopyranose mut 98.6 5.7E-08 2E-12 89.9 5.7 122 4-158 165-289 (397)
35 3dje_A Fructosyl amine: oxygen 98.5 3.4E-06 1.1E-10 79.1 16.9 58 61-120 161-222 (438)
36 1y56_B Sarcosine oxidase; dehy 98.5 2.5E-05 8.5E-10 71.6 21.0 206 61-299 149-355 (382)
37 1ryi_A Glycine oxidase; flavop 98.4 7.3E-06 2.5E-10 75.2 16.7 196 61-298 164-361 (382)
38 3nyc_A D-arginine dehydrogenas 98.4 3.3E-05 1.1E-09 70.6 20.8 57 61-120 154-210 (381)
39 3dme_A Conserved exported prot 98.4 1.1E-05 3.6E-10 73.5 16.9 206 61-296 150-367 (369)
40 2gag_B Heterotetrameric sarcos 98.4 2.4E-05 8.2E-10 72.3 18.9 199 62-299 175-375 (405)
41 3axb_A Putative oxidoreductase 98.3 2.9E-05 1E-09 72.9 17.5 206 62-298 182-417 (448)
42 2gf3_A MSOX, monomeric sarcosi 98.1 0.00027 9.2E-09 64.7 19.4 204 61-299 150-364 (389)
43 3ps9_A TRNA 5-methylaminomethy 98.1 7.9E-05 2.7E-09 73.9 16.2 57 61-120 417-474 (676)
44 3pvc_A TRNA 5-methylaminomethy 98.1 0.00017 5.7E-09 71.7 18.2 56 61-119 412-469 (689)
45 2oln_A NIKD protein; flavoprot 98.0 0.00076 2.6E-08 62.0 20.4 56 62-120 154-209 (397)
46 3da1_A Glycerol-3-phosphate de 98.0 0.00042 1.4E-08 67.1 19.2 220 61-313 170-407 (561)
47 2rgh_A Alpha-glycerophosphate 98.0 0.0013 4.6E-08 63.6 21.8 58 61-120 188-251 (571)
48 3cgv_A Geranylgeranyl reductas 97.8 0.0025 8.7E-08 58.2 20.4 57 62-120 103-163 (397)
49 3atr_A Conserved archaeal prot 97.7 0.0057 2E-07 57.3 21.6 57 62-120 101-163 (453)
50 3oz2_A Digeranylgeranylglycero 97.7 0.0051 1.7E-07 56.0 19.9 57 62-120 103-163 (397)
51 2qcu_A Aerobic glycerol-3-phos 97.7 0.01 3.5E-07 56.4 22.3 57 61-120 149-211 (501)
52 2gmh_A Electron transfer flavo 97.4 0.029 1E-06 54.4 21.5 58 62-120 145-218 (584)
53 3nix_A Flavoprotein/dehydrogen 97.4 0.0079 2.7E-07 55.5 16.8 58 62-120 107-167 (421)
54 3kkj_A Amine oxidase, flavin-c 97.3 0.00062 2.1E-08 58.2 8.3 86 208-302 244-329 (336)
55 3ihg_A RDME; flavoenzyme, anth 97.2 0.013 4.6E-07 56.1 16.9 62 61-124 120-189 (535)
56 2e1m_B L-glutamate oxidase; L- 97.1 0.0003 1E-08 53.9 3.6 113 104-235 4-118 (130)
57 3rp8_A Flavoprotein monooxygen 97.1 0.0053 1.8E-07 56.6 12.5 58 62-124 128-187 (407)
58 2i0z_A NAD(FAD)-utilizing dehy 97.0 0.0014 4.7E-08 61.5 8.1 65 53-119 126-191 (447)
59 3e1t_A Halogenase; flavoprotei 97.0 0.018 6.2E-07 54.8 15.8 57 62-120 112-173 (512)
60 1k0i_A P-hydroxybenzoate hydro 97.0 0.033 1.1E-06 50.9 16.9 57 62-120 104-164 (394)
61 3g3e_A D-amino-acid oxidase; F 97.0 0.0051 1.7E-07 55.4 10.8 188 61-301 142-335 (351)
62 3i3l_A Alkylhalidase CMLS; fla 96.9 0.0054 1.8E-07 59.6 10.7 58 61-120 128-189 (591)
63 1pj5_A N,N-dimethylglycine oxi 96.9 0.0022 7.6E-08 65.0 8.3 57 62-120 152-208 (830)
64 3nlc_A Uncharacterized protein 96.8 0.0029 9.8E-08 60.9 7.8 57 61-119 220-277 (549)
65 3lxd_A FAD-dependent pyridine 96.7 0.0043 1.5E-07 57.4 8.1 58 60-119 193-251 (415)
66 3fg2_P Putative rubredoxin red 96.7 0.0046 1.6E-07 57.0 8.3 58 60-119 183-241 (404)
67 2uzz_A N-methyl-L-tryptophan o 96.6 0.0033 1.1E-07 57.0 7.0 56 62-120 150-205 (372)
68 3v76_A Flavoprotein; structura 96.5 0.0054 1.9E-07 56.9 7.9 63 53-119 125-187 (417)
69 4at0_A 3-ketosteroid-delta4-5a 96.5 0.0042 1.4E-07 59.3 7.3 57 62-119 203-264 (510)
70 1y0p_A Fumarate reductase flav 96.5 0.0067 2.3E-07 58.7 8.6 58 61-119 255-317 (571)
71 1qo8_A Flavocytochrome C3 fuma 96.4 0.0065 2.2E-07 58.7 7.5 58 61-119 250-312 (566)
72 2qa2_A CABE, polyketide oxygen 96.3 0.2 6.7E-06 47.5 17.3 60 62-124 108-172 (499)
73 1c0p_A D-amino acid oxidase; a 96.3 0.053 1.8E-06 48.9 12.8 45 61-120 142-186 (363)
74 1d4d_A Flavocytochrome C fumar 96.3 0.01 3.6E-07 57.4 8.3 58 61-119 255-317 (572)
75 2qa1_A PGAE, polyketide oxygen 96.3 0.22 7.7E-06 47.1 17.4 60 62-124 107-171 (500)
76 2cdu_A NADPH oxidase; flavoenz 96.2 0.0084 2.9E-07 56.2 7.3 58 60-119 190-247 (452)
77 3fmw_A Oxygenase; mithramycin, 96.0 0.082 2.8E-06 51.0 13.4 60 62-124 149-213 (570)
78 2gqf_A Hypothetical protein HI 96.0 0.016 5.5E-07 53.4 8.1 62 54-119 103-168 (401)
79 2cul_A Glucose-inhibited divis 95.9 0.016 5.4E-07 49.0 6.9 55 62-119 69-125 (232)
80 3c4n_A Uncharacterized protein 95.9 0.0049 1.7E-07 56.9 3.9 56 61-119 172-236 (405)
81 2dkh_A 3-hydroxybenzoate hydro 95.9 0.84 2.9E-05 44.6 20.0 64 62-125 142-218 (639)
82 3oc4_A Oxidoreductase, pyridin 95.8 0.016 5.5E-07 54.2 7.1 56 60-118 188-243 (452)
83 1q1r_A Putidaredoxin reductase 95.7 0.028 9.5E-07 52.3 8.0 57 60-118 190-249 (431)
84 3iwa_A FAD-dependent pyridine 95.6 0.034 1.2E-06 52.3 8.5 58 59-119 200-258 (472)
85 1n4w_A CHOD, cholesterol oxida 95.5 0.024 8.2E-07 53.9 7.0 62 63-124 223-293 (504)
86 2wdq_A Succinate dehydrogenase 95.5 0.026 8.9E-07 54.8 7.4 58 61-119 143-206 (588)
87 2bs2_A Quinol-fumarate reducta 95.5 0.029 9.8E-07 55.2 7.6 57 61-119 158-220 (660)
88 1mo9_A ORF3; nucleotide bindin 95.4 0.043 1.5E-06 52.4 8.5 59 60-119 254-316 (523)
89 1trb_A Thioredoxin reductase; 95.4 0.033 1.1E-06 49.1 7.2 55 61-117 184-245 (320)
90 2ywl_A Thioredoxin reductase r 95.4 0.028 9.4E-07 45.2 6.2 55 61-119 56-110 (180)
91 2e4g_A Tryptophan halogenase; 95.4 0.032 1.1E-06 53.6 7.6 57 62-120 195-253 (550)
92 2h88_A Succinate dehydrogenase 95.4 0.024 8.3E-07 55.3 6.7 58 61-120 155-218 (621)
93 2weu_A Tryptophan 5-halogenase 95.2 0.041 1.4E-06 52.3 7.8 58 61-120 173-231 (511)
94 1coy_A Cholesterol oxidase; ox 95.2 0.035 1.2E-06 52.8 7.1 61 63-124 228-298 (507)
95 1rp0_A ARA6, thiazole biosynth 95.1 0.046 1.6E-06 47.6 7.2 56 62-119 120-191 (284)
96 3ef6_A Toluene 1,2-dioxygenase 95.1 0.03 1E-06 51.7 6.3 56 61-119 185-241 (410)
97 4a9w_A Monooxygenase; baeyer-v 95.1 0.038 1.3E-06 49.3 6.7 57 61-119 76-132 (357)
98 2x3n_A Probable FAD-dependent 95.0 0.032 1.1E-06 51.0 6.2 61 62-124 108-172 (399)
99 4dna_A Probable glutathione re 95.0 0.042 1.4E-06 51.6 7.0 57 60-119 210-268 (463)
100 2wpf_A Trypanothione reductase 95.0 0.047 1.6E-06 51.7 7.4 57 60-118 234-291 (495)
101 2bc0_A NADH oxidase; flavoprot 95.0 0.038 1.3E-06 52.3 6.7 56 60-118 235-290 (490)
102 1zk7_A HGII, reductase, mercur 95.0 0.055 1.9E-06 50.8 7.7 56 61-119 216-271 (467)
103 1fec_A Trypanothione reductase 95.0 0.045 1.5E-06 51.8 7.1 58 60-119 230-288 (490)
104 2hqm_A GR, grase, glutathione 94.9 0.055 1.9E-06 51.0 7.6 57 60-117 225-283 (479)
105 1xdi_A RV3303C-LPDA; reductase 94.9 0.049 1.7E-06 51.6 7.3 57 60-119 222-279 (499)
106 1m6i_A Programmed cell death p 94.9 0.058 2E-06 51.1 7.6 56 61-119 226-282 (493)
107 2v3a_A Rubredoxin reductase; a 94.7 0.06 2E-06 49.1 7.1 56 61-119 187-243 (384)
108 3o0h_A Glutathione reductase; 94.7 0.053 1.8E-06 51.2 6.8 56 60-118 231-287 (484)
109 2aqj_A Tryptophan halogenase, 94.6 0.069 2.4E-06 51.1 7.6 58 61-120 165-223 (538)
110 2e5v_A L-aspartate oxidase; ar 94.6 0.058 2E-06 50.8 6.9 57 61-120 119-177 (472)
111 3cgb_A Pyridine nucleotide-dis 94.6 0.1 3.4E-06 49.2 8.4 57 60-119 226-282 (480)
112 2zxi_A TRNA uridine 5-carboxym 94.5 0.062 2.1E-06 52.3 6.9 55 62-119 124-180 (637)
113 1ges_A Glutathione reductase; 94.5 0.074 2.5E-06 49.7 7.3 57 60-118 207-264 (450)
114 1kf6_A Fumarate reductase flav 94.5 0.068 2.3E-06 52.0 7.1 58 61-120 134-198 (602)
115 3ces_A MNMG, tRNA uridine 5-ca 94.3 0.069 2.4E-06 52.1 6.6 55 62-119 125-181 (651)
116 3itj_A Thioredoxin reductase 1 94.2 0.093 3.2E-06 46.4 7.0 52 64-117 211-269 (338)
117 3ab1_A Ferredoxin--NADP reduct 94.2 0.088 3E-06 47.3 6.9 55 62-118 203-262 (360)
118 2yqu_A 2-oxoglutarate dehydrog 94.1 0.086 2.9E-06 49.2 6.9 57 60-119 207-264 (455)
119 1nhp_A NADH peroxidase; oxidor 94.1 0.075 2.6E-06 49.5 6.4 57 60-119 190-246 (447)
120 1chu_A Protein (L-aspartate ox 94.0 0.06 2.1E-06 51.6 5.7 58 61-119 138-208 (540)
121 2pyx_A Tryptophan halogenase; 94.0 0.12 4.2E-06 49.2 7.7 58 61-120 175-234 (526)
122 3cty_A Thioredoxin reductase; 93.9 0.14 4.9E-06 45.0 7.7 51 65-117 194-250 (319)
123 3d1c_A Flavin-containing putat 93.9 0.093 3.2E-06 47.2 6.5 55 62-119 89-143 (369)
124 1onf_A GR, grase, glutathione 93.8 0.13 4.4E-06 48.8 7.4 57 60-118 216-274 (500)
125 2r9z_A Glutathione amide reduc 93.7 0.16 5.4E-06 47.6 7.8 56 60-118 206-263 (463)
126 2e1m_A L-glutamate oxidase; L- 93.6 0.18 6.1E-06 45.9 7.6 60 51-116 311-370 (376)
127 3alj_A 2-methyl-3-hydroxypyrid 93.5 0.16 5.5E-06 46.0 7.4 57 62-124 108-166 (379)
128 3lad_A Dihydrolipoamide dehydr 93.5 0.19 6.5E-06 47.1 8.0 56 60-118 220-279 (476)
129 1jnr_A Adenylylsulfate reducta 93.5 0.15 5.2E-06 49.9 7.5 57 61-119 151-218 (643)
130 3lzw_A Ferredoxin--NADP reduct 93.5 0.12 4.2E-06 45.4 6.3 56 61-118 67-122 (332)
131 1zmd_A Dihydrolipoyl dehydroge 93.4 0.18 6.2E-06 47.3 7.8 57 60-118 219-281 (474)
132 3ntd_A FAD-dependent pyridine 93.3 0.17 5.7E-06 48.7 7.3 57 60-118 191-266 (565)
133 2gqw_A Ferredoxin reductase; f 93.2 0.19 6.4E-06 46.2 7.3 52 60-118 186-238 (408)
134 3r9u_A Thioredoxin reductase; 93.2 0.17 5.7E-06 44.2 6.7 49 67-117 189-242 (315)
135 3nlc_A Uncharacterized protein 93.2 0.28 9.7E-06 47.0 8.7 79 214-301 463-543 (549)
136 2bry_A NEDD9 interacting prote 93.1 0.083 2.8E-06 50.1 4.9 60 61-120 166-231 (497)
137 3dk9_A Grase, GR, glutathione 93.1 0.31 1.1E-05 45.7 8.9 58 60-118 227-292 (478)
138 2zbw_A Thioredoxin reductase; 93.1 0.29 9.8E-06 43.2 8.2 53 62-117 192-250 (335)
139 2eq6_A Pyruvate dehydrogenase 93.0 0.25 8.6E-06 46.2 8.0 56 60-118 209-270 (464)
140 2qae_A Lipoamide, dihydrolipoy 92.9 0.27 9.4E-06 45.9 8.1 57 60-119 214-276 (468)
141 2a8x_A Dihydrolipoyl dehydroge 92.6 0.32 1.1E-05 45.4 8.2 56 60-118 211-270 (464)
142 3gwf_A Cyclohexanone monooxyge 92.6 0.18 6.3E-06 48.2 6.5 57 62-119 88-147 (540)
143 4ap3_A Steroid monooxygenase; 92.5 0.2 6.9E-06 48.1 6.7 56 62-118 100-158 (549)
144 1ebd_A E3BD, dihydrolipoamide 92.5 0.28 9.7E-06 45.6 7.5 57 60-119 210-270 (455)
145 3gyx_A Adenylylsulfate reducta 92.3 0.2 7E-06 49.2 6.4 56 62-119 167-233 (662)
146 1ojt_A Surface protein; redox- 92.2 0.2 6.9E-06 47.1 6.2 57 60-119 225-286 (482)
147 3cp8_A TRNA uridine 5-carboxym 92.1 0.21 7E-06 48.7 6.2 55 62-119 118-174 (641)
148 3dgh_A TRXR-1, thioredoxin red 92.1 0.28 9.7E-06 46.1 7.1 57 60-118 226-288 (483)
149 3ics_A Coenzyme A-disulfide re 92.1 0.28 9.7E-06 47.3 7.2 54 60-118 227-281 (588)
150 2xve_A Flavin-containing monoo 92.0 0.26 8.8E-06 46.2 6.6 58 61-119 101-166 (464)
151 3ab1_A Ferredoxin--NADP reduct 92.0 0.27 9.3E-06 44.0 6.6 57 61-119 74-131 (360)
152 3urh_A Dihydrolipoyl dehydroge 92.0 0.43 1.5E-05 44.9 8.2 56 60-118 238-299 (491)
153 1v59_A Dihydrolipoamide dehydr 91.9 0.34 1.2E-05 45.4 7.4 56 60-118 223-286 (478)
154 1fl2_A Alkyl hydroperoxide red 91.9 0.32 1.1E-05 42.4 6.8 51 65-117 183-240 (310)
155 1fl2_A Alkyl hydroperoxide red 91.8 0.28 9.5E-06 42.8 6.2 57 62-118 57-114 (310)
156 1kdg_A CDH, cellobiose dehydro 91.6 0.28 9.7E-06 46.9 6.6 59 65-125 199-267 (546)
157 2zbw_A Thioredoxin reductase; 91.6 0.33 1.1E-05 42.8 6.6 55 61-118 65-120 (335)
158 3k30_A Histamine dehydrogenase 91.5 0.14 4.8E-06 50.6 4.4 54 63-118 569-623 (690)
159 1dxl_A Dihydrolipoamide dehydr 91.5 0.41 1.4E-05 44.7 7.4 57 60-119 217-279 (470)
160 4g6h_A Rotenone-insensitive NA 91.2 0.33 1.1E-05 46.0 6.4 57 58-117 269-330 (502)
161 3uox_A Otemo; baeyer-villiger 91.0 0.31 1.1E-05 46.7 6.1 58 61-119 87-147 (545)
162 1vdc_A NTR, NADPH dependent th 91.0 0.31 1.1E-05 43.0 5.7 54 62-119 71-124 (333)
163 3jsk_A Cypbp37 protein; octame 90.8 0.61 2.1E-05 41.8 7.4 58 62-119 161-251 (344)
164 4b1b_A TRXR, thioredoxin reduc 90.7 0.46 1.6E-05 45.4 6.9 56 60-118 262-318 (542)
165 2jbv_A Choline oxidase; alcoho 90.5 0.25 8.7E-06 47.3 5.0 51 73-124 221-278 (546)
166 3h8l_A NADH oxidase; membrane 90.3 0.41 1.4E-05 43.8 6.1 51 61-118 218-269 (409)
167 2q0l_A TRXR, thioredoxin reduc 90.1 0.81 2.8E-05 39.7 7.7 51 65-117 182-239 (311)
168 3lzw_A Ferredoxin--NADP reduct 90.0 0.52 1.8E-05 41.3 6.3 50 65-117 193-248 (332)
169 1y56_A Hypothetical protein PH 89.8 0.29 9.9E-06 46.2 4.7 50 67-119 263-313 (493)
170 2vou_A 2,6-dihydroxypyridine h 89.7 0.6 2E-05 42.5 6.7 58 63-125 101-160 (397)
171 3h28_A Sulfide-quinone reducta 89.7 0.19 6.4E-06 46.5 3.3 50 63-117 202-254 (430)
172 1w4x_A Phenylacetone monooxyge 89.6 0.55 1.9E-05 44.8 6.6 56 63-119 96-154 (542)
173 2gv8_A Monooxygenase; FMO, FAD 89.5 0.52 1.8E-05 43.7 6.2 56 62-120 116-178 (447)
174 3fpz_A Thiazole biosynthetic e 89.4 0.26 8.9E-06 43.6 3.9 42 259-300 279-324 (326)
175 2gjc_A Thiazole biosynthetic e 89.4 0.95 3.2E-05 40.2 7.4 40 62-101 147-191 (326)
176 3dgz_A Thioredoxin reductase 2 89.4 0.9 3.1E-05 42.7 7.8 57 60-118 224-286 (488)
177 3f8d_A Thioredoxin reductase ( 89.3 0.56 1.9E-05 40.9 5.9 54 61-118 70-124 (323)
178 1vdc_A NTR, NADPH dependent th 89.1 0.86 3E-05 40.0 7.1 51 65-117 198-257 (333)
179 3kd9_A Coenzyme A disulfide re 89.0 0.66 2.2E-05 43.1 6.5 56 59-118 188-243 (449)
180 3ic9_A Dihydrolipoamide dehydr 89.0 0.96 3.3E-05 42.6 7.7 55 60-118 214-273 (492)
181 3klj_A NAD(FAD)-dependent dehy 89.0 0.62 2.1E-05 42.4 6.1 50 63-117 64-114 (385)
182 1hyu_A AHPF, alkyl hydroperoxi 88.7 0.62 2.1E-05 44.3 6.1 57 62-118 268-325 (521)
183 1pn0_A Phenol 2-monooxygenase; 88.6 19 0.00065 35.1 19.7 38 263-300 350-389 (665)
184 3s5w_A L-ornithine 5-monooxyge 88.3 0.58 2E-05 43.5 5.6 56 62-117 128-190 (463)
185 3s5w_A L-ornithine 5-monooxyge 87.9 1.8 6.1E-05 40.1 8.7 42 74-118 329-376 (463)
186 2q0l_A TRXR, thioredoxin reduc 87.7 0.91 3.1E-05 39.4 6.2 54 61-118 59-113 (311)
187 2q7v_A Thioredoxin reductase; 87.7 1.4 4.9E-05 38.5 7.5 50 65-117 191-247 (325)
188 3c96_A Flavin-containing monoo 87.6 1.1 3.9E-05 40.7 7.0 59 62-124 108-175 (410)
189 3itj_A Thioredoxin reductase 1 87.5 0.9 3.1E-05 39.8 6.1 53 62-118 85-141 (338)
190 4eqs_A Coenzyme A disulfide re 87.4 1.1 3.7E-05 41.5 6.8 52 60-118 187-239 (437)
191 3f8d_A Thioredoxin reductase ( 87.4 1.2 4.1E-05 38.6 6.8 50 66-118 194-250 (323)
192 1xhc_A NADH oxidase /nitrite r 87.4 1.1 3.8E-05 40.4 6.7 52 60-118 182-233 (367)
193 1lvl_A Dihydrolipoamide dehydr 86.9 0.73 2.5E-05 42.9 5.3 54 60-118 211-267 (458)
194 3cty_A Thioredoxin reductase; 86.7 1.2 4E-05 39.0 6.3 53 62-118 73-125 (319)
195 3qvp_A Glucose oxidase; oxidor 86.0 0.98 3.3E-05 43.6 5.8 53 72-125 238-299 (583)
196 3pl8_A Pyranose 2-oxidase; sub 85.9 0.81 2.8E-05 44.6 5.2 53 74-126 273-331 (623)
197 1ju2_A HydroxynitrIle lyase; f 85.6 0.49 1.7E-05 45.2 3.5 59 67-125 200-267 (536)
198 3hyw_A Sulfide-quinone reducta 85.2 0.55 1.9E-05 43.4 3.5 53 61-118 200-255 (430)
199 2xdo_A TETX2 protein; tetracyc 85.0 0.61 2.1E-05 42.4 3.7 53 63-120 130-183 (398)
200 3sx6_A Sulfide-quinone reducta 84.7 1.3 4.6E-05 40.8 6.0 50 63-117 210-267 (437)
201 3d1c_A Flavin-containing putat 84.5 1.3 4.5E-05 39.4 5.7 54 62-118 215-271 (369)
202 1hyu_A AHPF, alkyl hydroperoxi 84.5 1.5 5.1E-05 41.6 6.3 51 65-117 394-451 (521)
203 1trb_A Thioredoxin reductase; 84.2 1.9 6.6E-05 37.4 6.5 54 61-118 62-115 (320)
204 4gcm_A TRXR, thioredoxin reduc 84.0 1.3 4.4E-05 38.5 5.3 52 63-118 64-115 (312)
205 1cjc_A Protein (adrenodoxin re 83.9 1.8 6.2E-05 40.3 6.5 43 74-117 270-331 (460)
206 3q9t_A Choline dehydrogenase a 83.1 1 3.4E-05 43.5 4.4 53 72-124 217-275 (577)
207 3fim_B ARYL-alcohol oxidase; A 82.1 0.86 2.9E-05 43.8 3.5 53 72-125 219-282 (566)
208 2q7v_A Thioredoxin reductase; 82.0 2.6 8.8E-05 36.8 6.4 54 62-118 66-122 (325)
209 2a87_A TRXR, TR, thioredoxin r 81.5 2.4 8.1E-05 37.3 6.1 53 61-118 71-125 (335)
210 3fbs_A Oxidoreductase; structu 81.4 2.4 8.1E-05 36.2 5.9 53 62-118 57-111 (297)
211 2r0c_A REBC; flavin adenine di 81.1 3 0.0001 39.8 6.9 56 63-124 140-202 (549)
212 2gag_A Heterotetrameric sarcos 81.0 2.4 8.3E-05 43.5 6.6 49 68-117 323-381 (965)
213 1xhc_A NADH oxidase /nitrite r 80.8 2.2 7.6E-05 38.3 5.7 47 67-118 66-112 (367)
214 2cul_A Glucose-inhibited divis 80.7 1.6 5.3E-05 36.4 4.3 36 261-300 196-231 (232)
215 1gpe_A Protein (glucose oxidas 80.4 1.6 5.3E-05 42.2 4.7 53 72-124 242-302 (587)
216 1ps9_A 2,4-dienoyl-COA reducta 79.9 5 0.00017 39.3 8.3 51 63-118 575-627 (671)
217 3qfa_A Thioredoxin reductase 1 79.6 5.1 0.00017 37.9 8.0 58 60-118 249-314 (519)
218 3vrd_B FCCB subunit, flavocyto 79.3 0.54 1.8E-05 42.8 1.0 44 71-117 212-256 (401)
219 2a87_A TRXR, TR, thioredoxin r 79.2 1.9 6.5E-05 37.9 4.6 45 70-117 200-250 (335)
220 3ces_A MNMG, tRNA uridine 5-ca 78.6 4.5 0.00015 39.4 7.2 84 215-310 340-426 (651)
221 3t37_A Probable dehydrogenase; 78.6 1.9 6.6E-05 40.7 4.7 50 74-125 224-277 (526)
222 2zxi_A TRNA uridine 5-carboxym 78.1 5.1 0.00018 38.9 7.5 85 215-311 345-432 (637)
223 3r9u_A Thioredoxin reductase; 78.1 3.4 0.00012 35.5 5.9 53 61-117 62-116 (315)
224 3fbs_A Oxidoreductase; structu 77.8 2.7 9.2E-05 35.9 5.1 40 259-301 253-292 (297)
225 4fk1_A Putative thioredoxin re 77.7 3 0.0001 36.1 5.4 51 62-115 181-232 (304)
226 1q1r_A Putidaredoxin reductase 77.3 3.4 0.00012 38.0 5.9 46 68-118 67-113 (431)
227 4hb9_A Similarities with proba 77.1 2.6 8.8E-05 37.9 4.9 47 73-121 121-168 (412)
228 1o94_A Tmadh, trimethylamine d 75.6 2.4 8.3E-05 42.0 4.6 49 65-118 575-645 (729)
229 4a5l_A Thioredoxin reductase; 75.4 3.4 0.00012 35.7 5.1 53 62-118 67-120 (314)
230 1gte_A Dihydropyrimidine dehyd 75.0 7.9 0.00027 40.0 8.3 49 67-117 376-440 (1025)
231 2v3a_A Rubredoxin reductase; a 75.0 4.7 0.00016 36.3 6.0 46 68-118 67-112 (384)
232 2ywl_A Thioredoxin reductase r 74.0 4.7 0.00016 31.7 5.2 40 260-301 132-171 (180)
233 4fk1_A Putative thioredoxin re 73.2 5.1 0.00017 34.6 5.7 54 63-118 62-116 (304)
234 3ef6_A Toluene 1,2-dioxygenase 73.0 4.6 0.00016 36.8 5.5 45 69-118 65-110 (410)
235 4a9w_A Monooxygenase; baeyer-v 72.9 4.8 0.00016 35.2 5.5 41 259-301 310-352 (357)
236 2x8g_A Thioredoxin glutathione 72.2 10 0.00035 36.3 8.0 59 60-118 325-394 (598)
237 4b63_A L-ornithine N5 monooxyg 71.4 5.1 0.00017 37.7 5.5 56 62-117 146-212 (501)
238 3l8k_A Dihydrolipoyl dehydroge 71.2 5.8 0.0002 36.7 5.8 53 61-118 214-271 (466)
239 3h8l_A NADH oxidase; membrane 70.8 6 0.00021 35.8 5.8 40 262-302 298-337 (409)
240 3ntd_A FAD-dependent pyridine 69.7 5.5 0.00019 37.9 5.4 50 65-117 62-115 (565)
241 4eqs_A Coenzyme A disulfide re 69.6 7.1 0.00024 35.9 6.0 47 69-118 65-115 (437)
242 3ics_A Coenzyme A-disulfide re 69.6 5.8 0.0002 38.0 5.6 52 63-117 95-150 (588)
243 1lqt_A FPRA; NADP+ derivative, 69.0 4.6 0.00016 37.5 4.6 50 65-117 250-324 (456)
244 2vdc_G Glutamate synthase [NAD 68.9 2.9 9.8E-05 38.9 3.1 38 261-301 407-444 (456)
245 2bc0_A NADH oxidase; flavoprot 68.5 7 0.00024 36.5 5.8 49 67-118 98-148 (490)
246 1nhp_A NADH peroxidase; oxidor 67.4 12 0.0004 34.4 7.0 50 66-118 61-114 (447)
247 2cdu_A NADPH oxidase; flavoenz 67.0 8.8 0.0003 35.3 6.1 50 66-118 63-116 (452)
248 3hyw_A Sulfide-quinone reducta 66.7 5.5 0.00019 36.5 4.6 46 67-118 62-108 (430)
249 3lxd_A FAD-dependent pyridine 66.6 5.6 0.00019 36.2 4.6 50 63-117 67-117 (415)
250 2gqw_A Ferredoxin reductase; f 65.8 4.1 0.00014 37.1 3.5 43 71-118 69-112 (408)
251 3g5s_A Methylenetetrahydrofola 65.2 3.2 0.00011 38.1 2.5 77 215-300 283-361 (443)
252 3oc4_A Oxidoreductase, pyridin 65.0 9.4 0.00032 35.1 5.9 48 67-117 64-113 (452)
253 1chu_A Protein (L-aspartate ox 63.3 5.4 0.00018 37.9 3.9 43 259-301 363-411 (540)
254 3sx6_A Sulfide-quinone reducta 63.0 8.9 0.00031 35.1 5.3 51 63-119 61-112 (437)
255 2i0z_A NAD(FAD)-utilizing dehy 62.9 6.6 0.00023 36.2 4.4 39 262-300 403-443 (447)
256 3cgb_A Pyridine nucleotide-dis 61.7 9.6 0.00033 35.4 5.3 48 68-118 99-151 (480)
257 3iwa_A FAD-dependent pyridine 61.1 11 0.00037 34.9 5.5 44 72-118 77-124 (472)
258 4a5l_A Thioredoxin reductase; 60.7 15 0.00053 31.3 6.2 40 259-300 272-311 (314)
259 2vdc_G Glutamate synthase [NAD 60.0 9.7 0.00033 35.3 4.9 47 61-118 172-218 (456)
260 1ebd_A E3BD, dihydrolipoamide 59.3 17 0.00059 33.3 6.5 50 63-118 93-144 (455)
261 3kd9_A Coenzyme A disulfide re 58.7 10 0.00036 34.8 4.9 42 72-118 70-113 (449)
262 2gjc_A Thiazole biosynthetic e 57.8 8.1 0.00028 34.1 3.8 40 262-301 282-325 (326)
263 3uox_A Otemo; baeyer-villiger 56.2 8.8 0.0003 36.5 4.0 46 67-120 344-392 (545)
264 2a8x_A Dihydrolipoyl dehydroge 56.1 18 0.00062 33.3 6.1 51 63-119 93-146 (464)
265 3fg2_P Putative rubredoxin red 55.9 17 0.0006 32.7 5.9 47 65-117 61-108 (404)
266 1m6i_A Programmed cell death p 54.6 8.6 0.0003 36.0 3.6 41 73-118 102-143 (493)
267 2gqf_A Hypothetical protein HI 54.3 8.1 0.00028 35.1 3.3 36 262-297 362-399 (401)
268 3v76_A Flavoprotein; structura 54.2 5.2 0.00018 36.6 2.0 34 262-295 381-416 (417)
269 3dgh_A TRXR-1, thioredoxin red 54.0 13 0.00045 34.5 4.8 39 259-299 314-352 (483)
270 3dgz_A Thioredoxin reductase 2 53.3 14 0.00049 34.3 4.9 39 259-299 314-352 (488)
271 1kf6_A Fumarate reductase flav 52.7 11 0.00038 36.3 4.1 42 259-300 368-415 (602)
272 3jsk_A Cypbp37 protein; octame 52.7 8 0.00027 34.4 2.9 40 263-302 293-336 (344)
273 3cp8_A TRNA uridine 5-carboxym 52.2 13 0.00044 36.2 4.4 45 262-311 377-421 (641)
274 3vrd_B FCCB subunit, flavocyto 51.6 17 0.00058 32.6 5.0 43 71-119 65-108 (401)
275 3qfa_A Thioredoxin reductase 1 51.0 16 0.00055 34.3 4.9 39 259-299 342-380 (519)
276 3h28_A Sulfide-quinone reducta 50.8 20 0.0007 32.5 5.5 48 65-118 60-108 (430)
277 4gcm_A TRXR, thioredoxin reduc 50.3 26 0.0009 29.9 5.9 41 258-300 265-305 (312)
278 3gwf_A Cyclohexanone monooxyge 49.5 9 0.00031 36.4 2.9 43 71-120 340-385 (540)
279 1y56_A Hypothetical protein PH 49.0 11 0.00039 35.1 3.5 37 262-302 342-378 (493)
280 2vog_B BCL-2-modifying factor; 48.5 11 0.00038 19.2 1.7 16 319-334 11-26 (27)
281 1lvl_A Dihydrolipoamide dehydr 48.4 39 0.0013 31.0 7.0 44 67-118 102-145 (458)
282 2uzz_A N-methyl-L-tryptophan o 48.4 16 0.00053 32.3 4.2 74 212-298 283-356 (372)
283 1ojt_A Surface protein; redox- 48.1 27 0.00091 32.3 5.9 37 259-298 312-348 (482)
284 2eq6_A Pyruvate dehydrogenase 47.4 32 0.0011 31.7 6.3 37 259-298 297-333 (464)
285 3c4a_A Probable tryptophan hyd 47.3 5.9 0.0002 35.5 1.2 46 63-122 100-145 (381)
286 1dxl_A Dihydrolipoamide dehydr 47.0 28 0.00096 32.0 5.8 49 64-118 99-150 (470)
287 3l8k_A Dihydrolipoyl dehydroge 46.7 19 0.00065 33.2 4.6 38 259-299 296-333 (466)
288 2x8g_A Thioredoxin glutathione 46.3 21 0.00073 34.1 5.0 38 260-299 422-459 (598)
289 1qo8_A Flavocytochrome C3 fuma 46.0 11 0.00039 35.8 3.0 40 261-300 519-563 (566)
290 3lad_A Dihydrolipoamide dehydr 46.0 23 0.00077 32.7 5.0 39 259-300 306-344 (476)
291 1v59_A Dihydrolipoamide dehydr 45.5 23 0.00077 32.7 4.9 38 259-299 313-350 (478)
292 3ic9_A Dihydrolipoamide dehydr 44.4 23 0.00078 33.0 4.8 38 259-299 301-338 (492)
293 4dna_A Probable glutathione re 44.2 23 0.00078 32.6 4.7 38 259-299 294-331 (463)
294 3urh_A Dihydrolipoyl dehydroge 44.0 20 0.00069 33.3 4.3 38 259-299 326-363 (491)
295 3dk9_A Grase, GR, glutathione 43.8 28 0.00095 32.1 5.3 38 259-299 319-356 (478)
296 3o0h_A Glutathione reductase; 43.8 27 0.00091 32.4 5.1 38 259-299 314-351 (484)
297 1d4d_A Flavocytochrome C fumar 43.4 13 0.00043 35.6 2.9 39 261-299 525-568 (572)
298 1y0p_A Fumarate reductase flav 42.9 13 0.00043 35.5 2.8 39 261-299 524-567 (571)
299 3klj_A NAD(FAD)-dependent dehy 42.8 19 0.00066 32.3 3.9 40 259-299 253-294 (385)
300 2bs2_A Quinol-fumarate reducta 42.8 19 0.00066 35.1 4.1 42 259-300 381-428 (660)
301 2qae_A Lipoamide, dihydrolipoy 42.4 40 0.0014 30.9 6.1 39 259-299 302-340 (468)
302 4b1b_A TRXR, thioredoxin reduc 41.6 26 0.00089 33.2 4.7 40 259-300 346-385 (542)
303 1ges_A Glutathione reductase; 40.3 27 0.00093 32.0 4.6 37 260-299 292-328 (450)
304 2hqm_A GR, grase, glutathione 40.0 29 0.00099 32.1 4.7 37 260-299 311-347 (479)
305 1zmd_A Dihydrolipoyl dehydroge 39.3 26 0.00091 32.2 4.3 38 259-299 308-345 (474)
306 4at0_A 3-ketosteroid-delta4-5a 38.3 14 0.00048 34.6 2.2 38 261-298 466-508 (510)
307 1jnr_A Adenylylsulfate reducta 38.1 29 0.001 33.6 4.6 40 260-300 428-467 (643)
308 1rp0_A ARA6, thiazole biosynth 38.1 27 0.00094 29.6 4.0 42 262-304 232-278 (284)
309 1lqt_A FPRA; NADP+ derivative, 37.0 25 0.00085 32.4 3.7 39 261-301 349-387 (456)
310 1xdi_A RV3303C-LPDA; reductase 36.4 31 0.001 32.1 4.3 38 259-299 305-342 (499)
311 4ap3_A Steroid monooxygenase; 35.8 18 0.0006 34.4 2.5 42 71-120 353-397 (549)
312 1mo9_A ORF3; nucleotide bindin 35.6 30 0.001 32.4 4.1 37 259-298 341-377 (523)
313 2r9z_A Glutathione amide reduc 35.1 38 0.0013 31.1 4.7 36 260-298 291-326 (463)
314 4fay_A Microcompartments prote 34.7 50 0.0017 27.8 4.7 42 257-305 206-250 (258)
315 2h88_A Succinate dehydrogenase 34.6 19 0.00066 34.8 2.6 41 261-301 387-433 (621)
316 1gte_A Dihydropyrimidine dehyd 33.6 40 0.0014 34.7 4.9 39 259-300 469-507 (1025)
317 1fec_A Trypanothione reductase 33.5 41 0.0014 31.2 4.7 37 259-298 314-350 (490)
318 2wpf_A Trypanothione reductase 33.4 41 0.0014 31.2 4.7 37 259-298 318-354 (495)
319 1zk7_A HGII, reductase, mercur 32.9 37 0.0013 31.1 4.2 38 259-299 297-334 (467)
320 4g6h_A Rotenone-insensitive NA 32.6 42 0.0014 31.4 4.5 37 262-299 363-399 (502)
321 2e5v_A L-aspartate oxidase; ar 31.2 17 0.00059 33.7 1.6 41 258-298 324-370 (472)
322 1cjc_A Protein (adrenodoxin re 31.2 33 0.0011 31.7 3.5 38 263-302 359-396 (460)
323 2yqu_A 2-oxoglutarate dehydrog 30.4 71 0.0024 29.1 5.7 37 260-299 291-327 (455)
324 3k30_A Histamine dehydrogenase 30.2 22 0.00076 34.7 2.3 37 261-301 639-675 (690)
325 1pj5_A N,N-dimethylglycine oxi 30.1 99 0.0034 30.8 7.1 75 211-299 305-379 (830)
326 2wdq_A Succinate dehydrogenase 30.0 20 0.00068 34.4 1.8 39 262-300 379-423 (588)
327 2gag_A Heterotetrameric sarcos 29.9 46 0.0016 34.0 4.6 38 261-302 408-445 (965)
328 3c4n_A Uncharacterized protein 28.4 78 0.0027 28.2 5.5 75 211-301 315-399 (405)
329 2xve_A Flavin-containing monoo 28.3 61 0.0021 29.7 4.9 34 261-298 305-338 (464)
330 1onf_A GR, grase, glutathione 27.1 56 0.0019 30.3 4.4 48 65-118 93-152 (500)
331 1kdg_A CDH, cellobiose dehydro 25.5 71 0.0024 30.0 4.8 40 262-301 504-544 (546)
332 1o94_A Tmadh, trimethylamine d 24.7 32 0.0011 33.9 2.2 37 261-301 664-700 (729)
333 4b63_A L-ornithine N5 monooxyg 22.7 97 0.0033 28.8 5.1 42 77-118 355-408 (501)
334 3gyx_A Adenylylsulfate reducta 22.4 72 0.0025 31.0 4.2 40 259-300 448-488 (662)
335 1n4w_A CHOD, cholesterol oxida 20.9 1.1E+02 0.0038 28.3 5.1 41 261-301 460-501 (504)
336 4hb9_A Similarities with proba 20.7 71 0.0024 28.1 3.6 39 263-301 310-350 (412)
337 3ihm_A Styrene monooxygenase A 20.3 95 0.0032 28.0 4.4 88 209-299 251-345 (430)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.97 E-value=2e-29 Score=237.84 Aligned_cols=278 Identities=12% Similarity=0.069 Sum_probs=210.6
Q ss_pred CCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHHHhcCCCceeEeecCCCchhhhHHHHHHHHHcCCeEEcceeee
Q 019274 6 CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVT 85 (343)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~ 85 (343)
++++.++.++++++...++.+++++|+..++..+...... . ...+++||+ +.|+++|++.++++|++|+++++|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~--~~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~ 220 (425)
T 3ka7_A 146 VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRF--G--GTGIPEGGC-KGIIDALETVISANGGKIHTGQEVS 220 (425)
T ss_dssp CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH--C--SCEEETTSH-HHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhc--C--CccccCCCH-HHHHHHHHHHHHHcCCEEEECCcee
Confidence 5788899999999999999999999999888887765311 1 235789995 6799999999999999999999999
Q ss_pred EEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhc-cc-CchhHHhhccCcccceEEEEEEeccCCCCCCCc
Q 019274 86 DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSI-LC-NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVS 163 (343)
Q Consensus 86 ~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~-~~-~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~ 163 (343)
+|..++ +++++|+++|++++||.||+|+|++.+.+|+++.. ++ +..+.+.+.++.+.+.+++++++++++. . .+
T Consensus 221 ~i~~~~--~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~-~-~~ 296 (425)
T 3ka7_A 221 KILIEN--GKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLV-G-HT 296 (425)
T ss_dssp EEEEET--TEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSS-C-SS
T ss_pred EEEEEC--CEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCcc-C-cC
Confidence 999987 78888999888999999999999999999987532 10 2345567778888888899999998864 2 34
Q ss_pred ceeecCCCCccceEeeccccccccCCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCC
Q 019274 164 NACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPK 243 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~ 243 (343)
+.+++.+......+...+...+.+++++.+++.+.++...+..+. .++.++.++++|++++|+.. .....+.+|+.
T Consensus 297 ~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~~~---~~~~~v~~~~~ 372 (425)
T 3ka7_A 297 GVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPGKR---YEVLLIQSYHD 372 (425)
T ss_dssp SEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTTCC---EEEEEEEEEBT
T ss_pred EEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCCCc---eEEEEEEEECC
Confidence 555543322111233344455666656777776654432222222 34667999999999999843 33346788999
Q ss_pred CccccCCCCCCCCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 244 SLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 244 ~~~~~~~g~~~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
++|.+.+++. .++...+|++|||+||||+.+.+| .+|++|+.||+.||++|+.
T Consensus 373 ~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg-~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 373 EWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGG-IEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp TBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTC-CHHHHHHHHHHHHHHC---
T ss_pred CccccccccC-CCCCCCCCcCCeEEeCCccCCCCC-CccHHHHHHHHHHHHHhhC
Confidence 9999998853 457777899999999999987666 5999999999999999874
No 2
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.95 E-value=2.6e-25 Score=209.66 Aligned_cols=272 Identities=12% Similarity=0.066 Sum_probs=192.2
Q ss_pred CCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHHHhcCCCceeEeecCCCchhhhHHHHHHHHHcCCeEEcceee
Q 019274 5 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRV 84 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V 84 (343)
+++++.++.++++++...++.+++++|+..++..+...... . ...+|+||+ +.|+++|++.++++|++|+++++|
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--g~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V 212 (421)
T 3nrn_A 138 IGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRW--G--GPGLIRGGC-KAVIDELERIIMENKGKILTRKEV 212 (421)
T ss_dssp TCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH--C--SCEEETTCH-HHHHHHHHHHHHTTTCEEESSCCE
T ss_pred cCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhc--C--CcceecCCH-HHHHHHHHHHHHHCCCEEEcCCeE
Confidence 47888899999999999999999999999888887765311 1 235789994 779999999999999999999999
Q ss_pred eEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCCCCCCCcc
Q 019274 85 TDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSN 164 (343)
Q Consensus 85 ~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~ 164 (343)
++|..++ +++ |.++|++++||.||+|+|++.+.+|++...++ ....+.+.++.+.+.++++++++++.. . .++
T Consensus 213 ~~i~~~~--~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~v~l~~~~~~~-~-~~~ 285 (421)
T 3nrn_A 213 VEINIEE--KKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFD-RDYLKQVDSIEPSEGIKFNLAVPGEPR-I-GNT 285 (421)
T ss_dssp EEEETTT--TEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSC-HHHHHHHHTCCCCCEEEEEEEEESSCS-S-CSS
T ss_pred EEEEEEC--CEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCC-HHHHHHHhCCCCCceEEEEEEEcCCcc-c-CCe
Confidence 9999877 665 76667899999999999999999998743332 345567788888888999999998753 2 345
Q ss_pred eeecCCCCccceEeeccccccccCCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCC
Q 019274 165 ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS 244 (343)
Q Consensus 165 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~ 244 (343)
.+++.+... ..+...+...+...+++.+++.+..+.. ..+.++.++.++++|++++| . .+++ .+.+|+.+
T Consensus 286 ~~~~~~~~~-~~i~~~s~~~p~~ap~G~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~~p--~-~~~~--~~~~~~~~ 355 (421)
T 3nrn_A 286 IVFTPGLMI-NGFNEPSALDKSLAREGYTLIMAHMALK----NGNVKKAIEKGWEELLEIFP--E-GEPL--LAQVYRDG 355 (421)
T ss_dssp EEECTTSSS-CEEECGGGTCGGGSCTTEEEEEEEEECT----TCCHHHHHHHHHHHHHHHCT--T-CEEE--EEEEC---
T ss_pred EEEcCCcce-eeEeccCCCCCCcCCCCceEEEEEEeec----cccHHHHHHHHHHHHHHHcC--C-CeEE--EeeeccCC
Confidence 555443221 1222333333444534556655544321 22345669999999999999 2 2443 45678888
Q ss_pred ccccCCCCCCCCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCCCCcc
Q 019274 245 LTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFS 306 (343)
Q Consensus 245 ~~~~~~g~~~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~~~~~ 306 (343)
+|.+.+......+ .++ +|||+||||+.++++ .+|++|+.||.+||+.| +.|+++
T Consensus 356 ~p~~~~~~~~~~~--~~~-~gl~laGd~~~~~~g-~~~~ga~~sg~~aA~~l----~~~~~~ 409 (421)
T 3nrn_A 356 NPVNRTRAGLHIE--WPL-NEVLVVGDGYRPPGG-IEVDGIALGVMKALEKL----NLGSFS 409 (421)
T ss_dssp ----------CCC--CCC-SSEEECSTTCCCTTC-CHHHHHHHHHHHHHHHT----TSCCCC
T ss_pred CCcccccCCCCCC--CCC-CcEEEECCcccCCCc-eeeehHHHHHHHHHHHh----CcCchh
Confidence 8877433211222 567 999999999985434 36799999999999999 666766
No 3
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.94 E-value=1.4e-26 Score=224.07 Aligned_cols=313 Identities=16% Similarity=0.086 Sum_probs=216.0
Q ss_pred CHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHH-----HHhcCCCceeEeecCCCchhhhHHHHHHHHHcCCeEEcc
Q 019274 7 SERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-----ILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDG 81 (343)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~-----~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~ 81 (343)
.++.++.++++++.+.++.+++++|+..++..+... ++....+....+++||+ +.|+++|++.+ |++|++|
T Consensus 157 ~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~ 232 (520)
T 1s3e_A 157 WTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGS-GQVSERIMDLL---GDRVKLE 232 (520)
T ss_dssp SSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCT-HHHHHHHHHHH---GGGEESS
T ss_pred CCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCH-HHHHHHHHHHc---CCcEEcC
Confidence 345668899999999999999999999887665421 01111222345678995 67999998776 7899999
Q ss_pred eeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCCCCC
Q 019274 82 RRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP 160 (343)
Q Consensus 82 ~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~ 160 (343)
++|++|..++ +++. |++. |++++||+||+|+|+..+.+|+..+.++ ....+.++++.+.++.++++.|++++|..
T Consensus 233 ~~V~~i~~~~--~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp-~~~~~~i~~~~~~~~~kv~l~~~~~~w~~ 308 (520)
T 1s3e_A 233 RPVIYIDQTR--ENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLP-MMRNQMITRVPLGSVIKCIVYYKEPFWRK 308 (520)
T ss_dssp CCEEEEECSS--SSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCC-HHHHHHTTSCCBCCEEEEEEECSSCGGGG
T ss_pred CeeEEEEECC--CeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCC-HHHHHHHHhCCCcceEEEEEEeCCCcccC
Confidence 9999999877 5554 7775 6689999999999999988876444342 34456778888989999999999987643
Q ss_pred CCc-ceee--cCCCCccceEeeccccccccCCCC-CeEEEEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCCcee
Q 019274 161 NVS-NACS--GFGDSLAWTFFDLNKIYDEHKDDS-ATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 234 (343)
Q Consensus 161 ~~~-~~~~--~~~~~~~~~~~d~~~~~~~~~~~~-~~~i~~~~~--~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~ 234 (343)
... ...+ ..+.... .++|.+.. ++ ..++..... .+..|.+++++++.+.++++|+++||......++
T Consensus 309 ~~~~g~~~~~~~~~~~~-~~~d~~~~------~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~~~~p~ 381 (520)
T 1s3e_A 309 KDYCGTMIIDGEEAPVA-YTLDDTKP------EGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEALEPV 381 (520)
T ss_dssp GTEEEEEEECSTTCSCS-EEEECCCT------TSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGGGGCCS
T ss_pred CCCCceeeccCCCCceE-EEeeCCCC------CCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCccccCCcc
Confidence 221 1111 1111222 23453321 22 244433222 2245677889999999999999999864112455
Q ss_pred eeEEEecCCCcc-------ccCCCCCC-CCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCCCCcc
Q 019274 235 DHKIRRFPKSLT-------HFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFS 306 (343)
Q Consensus 235 ~~~~~r~~~~~~-------~~~~g~~~-~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~~~~~ 306 (343)
.....+|....+ .+.||... .++...++++||||||+++...++ ++|+||+.||++||++|++.++....+
T Consensus 382 ~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~-g~v~GAi~SG~~aA~~i~~~l~~~~~~ 460 (520)
T 1s3e_A 382 HYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWS-GYMEGAVEAGERAAREILHAMGKIPED 460 (520)
T ss_dssp EEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSST-TSHHHHHHHHHHHHHHHHHHTTSSCGG
T ss_pred EEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCc-EEhHHHHHHHHHHHHHHHHHHhcCccc
Confidence 666777853211 23445321 234456788999999999976777 699999999999999999999888888
Q ss_pred cccccCCCchhhhHHHHHHHHHHhhhcCCCCC
Q 019274 307 KIIPVEEDEPHIEALRTVNRRFNEIRAQLPLS 338 (343)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (343)
.+|..++ +......+.+.+. ++.+.||+-
T Consensus 461 ~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~ 489 (520)
T 1s3e_A 461 EIWQSEP-ESVDVPAQPITTT--FLERHLPSV 489 (520)
T ss_dssp GSSCCCC-CCSSSCCCCCCCC--HHHHHSCCH
T ss_pred cccccCC-ccccCCccccccc--hHhhcCCCc
Confidence 9998777 5455555555555 445566653
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.94 E-value=1.3e-25 Score=214.98 Aligned_cols=282 Identities=13% Similarity=0.089 Sum_probs=203.4
Q ss_pred CCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHHHhc--------------------------CCCceeEeecCC
Q 019274 5 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH--------------------------QKNFDLVWCRGT 58 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~--------------------------~~~~~~~~~~gG 58 (343)
++++++.+++++|++.++|+.+++++|+..+++.+....... .....+.+++||
T Consensus 153 ~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG 232 (477)
T 3nks_A 153 RLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGG 232 (477)
T ss_dssp HHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTC
T ss_pred hhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCC
Confidence 567899999999999999999999999998877654421000 012245678999
Q ss_pred CchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhh
Q 019274 59 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKV 138 (343)
Q Consensus 59 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~ 138 (343)
+ +.|+++|++.+++.|++|+++++|++|..++ ++++.|++++++++||+||+|+|++.+.+|+++.. ++..+.+
T Consensus 233 ~-~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~--~~~~~v~~~~~~~~ad~vv~a~p~~~~~~ll~~~~---~~~~~~l 306 (477)
T 3nks_A 233 L-EMLPQALETHLTSRGVSVLRGQPVCGLSLQA--EGRWKVSLRDSSLEADHVISAIPASVLSELLPAEA---APLARAL 306 (477)
T ss_dssp T-THHHHHHHHHHHHTTCEEECSCCCCEEEECG--GGCEEEECSSCEEEESEEEECSCHHHHHHHSCGGG---HHHHHHH
T ss_pred H-HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcC--CceEEEEECCeEEEcCEEEECCCHHHHHHhccccC---HHHHHHH
Confidence 6 6799999999999999999999999999877 44457877777899999999999999999987642 3455677
Q ss_pred ccCcccceEEEEEEeccCCCCCCCcceeecCCCC---ccceEeeccccccccCCCCCeEEEEEeeCC------CCCCCCC
Q 019274 139 LNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDS---LAWTFFDLNKIYDEHKDDSATVIQADFYHA------NELMPLK 209 (343)
Q Consensus 139 ~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~ 209 (343)
.++.+.++.++++.|+++++....+..+...... .++ +|+.+.......+++..++.+.+... .....++
T Consensus 307 ~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~ 385 (477)
T 3nks_A 307 SAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGI-VYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLS 385 (477)
T ss_dssp HTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEE-ECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCC
T ss_pred hcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEE-EEeccccCCCCCCCCceEEEEEECCccccccccccCCCC
Confidence 8889999999999999987633333333322111 122 45533221111123456654433211 1112468
Q ss_pred HHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCC----CCCCCCeEEeeccccCCCCCccchHH
Q 019274 210 DDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG----FTSFPNLFMAGDWITTRHGSWSQERS 285 (343)
Q Consensus 210 ~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~----~~~~~~L~laGd~~~~g~~~~~~ega 285 (343)
++++.+.++++|+++++... ++....+.+|+++++.|++|+...+... ....+|||+||||+. | .+|++|
T Consensus 386 ~~~~~~~~~~~L~~~~g~~~--~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~-G---~gv~~a 459 (477)
T 3nks_A 386 QELFQQRAQEAAATQLGLKE--MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYE-G---VAVNDC 459 (477)
T ss_dssp HHHHHHHHHHHHHHHHCCCS--CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTS-C---CSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCC--CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCC-C---CcHHHH
Confidence 99999999999999997533 5667788999999999999875322111 112468999999974 3 478999
Q ss_pred HHHHHHHHHHHHHH
Q 019274 286 YVTGLEAANRVVDY 299 (343)
Q Consensus 286 ~~Sg~~aA~~il~~ 299 (343)
+.||+.||+.|+++
T Consensus 460 ~~sg~~aA~~il~~ 473 (477)
T 3nks_A 460 IESGRQAAVSVLGT 473 (477)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.93 E-value=7.6e-24 Score=203.92 Aligned_cols=244 Identities=11% Similarity=0.078 Sum_probs=138.1
Q ss_pred eEeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHH-Hhhhhhcc
Q 019274 52 LVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ-ELIKNSIL 129 (343)
Q Consensus 52 ~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~-~Ll~~~~~ 129 (343)
..+|+||+ +.|+++|++.++++|++|++|++|++|..++ +++++|+++ |++++||.||+|+++..+. +|++....
T Consensus 213 ~~~p~GG~-~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~ 289 (501)
T 4dgk_A 213 VWFPRGGT-GALVQGMIKLFQDLGGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPA 289 (501)
T ss_dssp EEEETTHH-HHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC--------------
T ss_pred eEEeCCCC-cchHHHHHHHHHHhCCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcccccc
Confidence 45799995 6799999999999999999999999999998 889999997 6899999999999988765 56666433
Q ss_pred cCchhHHhhccCccc-ceEEEEEEeccCCCCCCCcceeecCCCC--------------ccceEee-ccccccccCCCCCe
Q 019274 130 CNREEFLKVLNLASI-DVVSVKLWFDKKVTVPNVSNACSGFGDS--------------LAWTFFD-LNKIYDEHKDDSAT 193 (343)
Q Consensus 130 ~~~~~~~~~~~l~~~-~~~~v~l~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~d-~~~~~~~~~~~~~~ 193 (343)
+ ....+.+++.++. +.++++++++.+......++.+++.+.. ....+.. .+...+.+++++.+
T Consensus 290 ~-~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~ 368 (501)
T 4dgk_A 290 A-VKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCG 368 (501)
T ss_dssp --------------CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCE
T ss_pred c-hhhhhhhhccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCc
Confidence 2 2333455555554 5778899999876533334444332100 0011111 11222344545555
Q ss_pred EEEEE-eeCCCCCCCC----CHHHHHHHHHHHHhhh-cccCCCCceeeeEEEecCCCccc-----------cCCC---CC
Q 019274 194 VIQAD-FYHANELMPL----KDDQVVAKAVSYLSKC-IKDFSTATVMDHKIRRFPKSLTH-----------FFPG---SY 253 (343)
Q Consensus 194 ~i~~~-~~~~~~~~~~----~~~e~~~~~~~~L~~~-~p~~~~~~~~~~~~~r~~~~~~~-----------~~~g---~~ 253 (343)
.+.+. ..+...+... .++++.+++++.|++. +|++++ .++...+. +|.++.. ..+. ..
T Consensus 369 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~~~-~i~~~~~~-tP~~~~~~~~~~~G~~~g~~~~~~q~~ 446 (501)
T 4dgk_A 369 SYYVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQHYMPGLRS-QLVTHRMF-TPFDFRDQLNAYHGSAFSVEPVLTQSA 446 (501)
T ss_dssp EEEEEEEECCTTTSCCCHHHHHHHHHHHHHHHHHHHTCTTHHH-HEEEEEEE-CTTTTC---------------------
T ss_pred eEEEEEecCccccccccHHHHHHHHHHHHHHHHHHhhCCChHH-ceEEEEEC-CHHHHHHHcCCCCccccChhcchhhcc
Confidence 54332 2222222221 2567788999999875 599986 66665554 4443322 2111 11
Q ss_pred CCCCCCC-CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCCCC
Q 019274 254 KYMMRGF-TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGS 304 (343)
Q Consensus 254 ~~~p~~~-~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~~~ 304 (343)
..||... ++++|||+||+++++| ++++||+.||++||+.|++++.-|.
T Consensus 447 ~~RP~~~~t~i~gLyl~G~~t~pG---~Gv~ga~~SG~~aA~~il~dL~gG~ 495 (501)
T 4dgk_A 447 WFRPHNRDKTITNLYLVGAGTHPG---AGIPGVIGSAKATAGLMLEDLIGGS 495 (501)
T ss_dssp ---------CCTTEEECCCH---------HHHHHHHHHHHHHHHHHHHC---
T ss_pred ccCCCCCCCCCCCEEEECCCCCCc---ccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2466543 6899999999998765 5789999999999999999997654
No 6
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.91 E-value=3.4e-24 Score=203.79 Aligned_cols=278 Identities=12% Similarity=0.093 Sum_probs=189.3
Q ss_pred CHHHHHHhHHHHHHhhhcCCcc-cccHHHHHHHHHHH-----HHhcCCCceeEeecCCCchhhhHHHHHHHHHcCCeEEc
Q 019274 7 SERLYRNVIGPLVQVGLFAPAE-QCSAAATLGILYFI-----ILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLD 80 (343)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~~sa~~~~~~l~~~-----~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~ 80 (343)
.++.++.++++++.+.++.+++ ++|+..++..+... ++. ..+....+++||+ +.|+++|++.+ |++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~ 231 (453)
T 2yg5_A 157 DDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGGM-QQVSIRMAEAL---GDDVFL 231 (453)
T ss_dssp SCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTCT-HHHHHHHHHHH---GGGEEC
T ss_pred CCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCCh-HHHHHHHHHhc---CCcEEc
Confidence 3455667889998888999999 99998877665431 000 0011235688995 67999998766 789999
Q ss_pred ceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCCCCC
Q 019274 81 GRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP 160 (343)
Q Consensus 81 ~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~ 160 (343)
|++|++|..++ ++.+.|++++++++||+||+|+|+..+.+|+..+.++ ....+.++++.+.++.++++.|++++|..
T Consensus 232 ~~~V~~i~~~~--~~~v~v~~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp-~~~~~~i~~~~~~~~~kv~l~~~~~~w~~ 308 (453)
T 2yg5_A 232 NAPVRTVKWNE--SGATVLADGDIRVEASRVILAVPPNLYSRISYDPPLP-RRQHQMHQHQSLGLVIKVHAVYETPFWRE 308 (453)
T ss_dssp SCCEEEEEEET--TEEEEEETTTEEEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHGGGEEECCEEEEEEEESSCGGGG
T ss_pred CCceEEEEEeC--CceEEEEECCeEEEcCEEEEcCCHHHHhcCEeCCCCC-HHHHHHHhcCCCcceEEEEEEECCCCCCC
Confidence 99999999877 5523477778889999999999999988876444332 34456678888888999999999987633
Q ss_pred CCc-ceeecCCCCccceEeeccccccccCCCC-CeEEEEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeee
Q 019274 161 NVS-NACSGFGDSLAWTFFDLNKIYDEHKDDS-ATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDH 236 (343)
Q Consensus 161 ~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~i~~~~~--~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~ 236 (343)
... ...+..+....+ +++.+. + ++ ..++.+... .+..|..++++++.+.++++|+++||.... +++..
T Consensus 309 ~~~~g~~~~~~~~~~~-~~~~~~--~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~-~p~~~ 380 (453)
T 2yg5_A 309 DGLSGTGFGASEVVQE-VYDNTN--H----EDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKAE-EPVVY 380 (453)
T ss_dssp GTEEEEEECTTSSSCE-EEECCC--T----TCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGGG-CCSEE
T ss_pred CCCCceeecCCCCeEE-EEeCCC--C----CCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccCC-CccEE
Confidence 221 111211222222 345331 1 22 234433222 223455678899999999999999975322 45565
Q ss_pred EEEecCCCc-------cccCCCCCC-CCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 237 KIRRFPKSL-------THFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 237 ~~~r~~~~~-------~~~~~g~~~-~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
.+.+|.... +.+.||... .++...++++||||||+++...++ ++|+||+.||++||++|++.++
T Consensus 381 ~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~-g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 381 YESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGY-QHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp EECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTT-TSHHHHHHHHHHHHHHHHHHC-
T ss_pred EEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccc-cchHHHHHHHHHHHHHHHHHhc
Confidence 667785321 234555321 234456789999999999976677 5899999999999999998764
No 7
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.91 E-value=1.3e-23 Score=201.08 Aligned_cols=280 Identities=15% Similarity=0.109 Sum_probs=193.1
Q ss_pred CCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHHHh---------------------cCCC----ceeEeecCCC
Q 019274 5 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA---------------------HQKN----FDLVWCRGTL 59 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~---------------------~~~~----~~~~~~~gG~ 59 (343)
++++++++.++.|++.++++.+++++|+.+++..+..+... .... ....+++||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~ 237 (478)
T 2ivd_A 158 HLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGL 237 (478)
T ss_dssp HTCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCT
T ss_pred hhCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCH
Confidence 47889999999999999999999999998776655432100 0011 3456789995
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE---C-CeEEecCEEEEeeChhhHHHhhhhhcccCchhH
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-KETYSAGAVVLAVGISTLQELIKNSILCNREEF 135 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~-g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~ 135 (343)
+.|+++|++.+ |++|+++++|++|..++ ++ +.|++ . |++++||+||+|+|++.+.+|+++ + +....
T Consensus 238 -~~l~~~l~~~l---g~~i~~~~~V~~i~~~~--~~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~--l-~~~~~ 307 (478)
T 2ivd_A 238 -QVLIDALAASL---GDAAHVGARVEGLARED--GG-WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRP--L-DDALA 307 (478)
T ss_dssp -HHHHHHHHHHH---GGGEESSEEEEEEECC----C-CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTT--T-CHHHH
T ss_pred -HHHHHHHHHHh---hhhEEcCCEEEEEEecC--Ce-EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhc--c-CHHHH
Confidence 67999999887 68999999999999877 44 46776 4 668999999999999999988864 2 23445
Q ss_pred HhhccCcccceEEEEEEeccCCCCC-CCcceeecC--CCCccceEeeccccccccCCCCCeEEEEEeeC--CCCCCCCCH
Q 019274 136 LKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGF--GDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKD 210 (343)
Q Consensus 136 ~~~~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~ 210 (343)
+.++++.+.++.++++.++++++.. ..+..+... +....+.+++... .+...+++..++.+.+.. +..+...++
T Consensus 308 ~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~p~g~~~l~~~~~~~~~~~~~~~~~ 386 (478)
T 2ivd_A 308 ALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTT-FPFRAEGGRVLYSCMVGGARQPGLVEQDE 386 (478)
T ss_dssp HHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHH-CGGGBSTTCEEEEEEEECTTCGGGGGSCH
T ss_pred HHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEccc-CCCcCCCCCEEEEEEeCCcCCccccCCCH
Confidence 6778888999999999999886532 122222211 1111222343221 122222344555443332 233456789
Q ss_pred HHHHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCC----CCCCCCCCCeEEeeccccCCCCCccchHHH
Q 019274 211 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYM----MRGFTSFPNLFMAGDWITTRHGSWSQERSY 286 (343)
Q Consensus 211 ~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~----p~~~~~~~~L~laGd~~~~g~~~~~~ega~ 286 (343)
+++.+.+++.|+++||... .+....+.+|+.+.+.+.+|+.... +...+ ++||||||+++. | .+|+||+
T Consensus 387 ~~~~~~~~~~l~~~~~~~~--~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~-g---~gv~gA~ 459 (478)
T 2ivd_A 387 DALAALAREELKALAGVTA--RPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAYK-G---VGLNDCI 459 (478)
T ss_dssp HHHHHHHHHHHHHHHCCCS--CCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTTS-C---CSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCC--CCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCCC-C---CCHHHHH
Confidence 9999999999999998754 4666667889999888888853211 11112 689999999973 2 3699999
Q ss_pred HHHHHHHHHHHHHhCC
Q 019274 287 VTGLEAANRVVDYLGD 302 (343)
Q Consensus 287 ~Sg~~aA~~il~~~~~ 302 (343)
.||++||+.|++.++.
T Consensus 460 ~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 460 RNAAQLADALVAGNTS 475 (478)
T ss_dssp HHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhcc
Confidence 9999999999887653
No 8
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.90 E-value=2e-23 Score=199.09 Aligned_cols=279 Identities=15% Similarity=0.184 Sum_probs=195.7
Q ss_pred CCCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHHH------hc---------------CCCceeEeecCCCchh
Q 019274 4 FGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIIL------AH---------------QKNFDLVWCRGTLREK 62 (343)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~------~~---------------~~~~~~~~~~gG~~~~ 62 (343)
.+++.+..+.+++|++.++|+.+++++|+...+..+..+.. .. .....+.+++||+ +.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~ 236 (470)
T 3i6d_A 158 RRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGL-QT 236 (470)
T ss_dssp HHSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEETTCT-HH
T ss_pred HhcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChH-HH
Confidence 35788999999999999999999999999877665422100 00 0012455678995 67
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccC
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 141 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l 141 (343)
|+++|++.+++ ++|+++++|++|..++ ++ +.|++. |++++||+||+|+|++.+.+|+.+. +..+.+.++
T Consensus 237 l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~-----~~~~~~~~~ 306 (470)
T 3i6d_A 237 LVEEIEKQLKL--TKVYKGTKVTKLSHSG--SC-YSLELDNGVTLDADSVIVTAPHKAAAGMLSEL-----PAISHLKNM 306 (470)
T ss_dssp HHHHHHHTCCS--EEEECSCCEEEEEECS--SS-EEEEESSSCEEEESEEEECSCHHHHHHHTTTS-----TTHHHHHTC
T ss_pred HHHHHHHhcCC--CEEEeCCceEEEEEcC--Ce-EEEEECCCCEEECCEEEECCCHHHHHHHcCCc-----hhhHHHhcC
Confidence 99999887744 7999999999999887 44 457776 5689999999999999999887653 224567888
Q ss_pred cccceEEEEEEeccCCCCCCC--cceeecCCCCc--cceEeeccccccccCCCCCeEEEEEee--CCCCCCCCCHHHHHH
Q 019274 142 ASIDVVSVKLWFDKKVTVPNV--SNACSGFGDSL--AWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVA 215 (343)
Q Consensus 142 ~~~~~~~v~l~~~~~~~~~~~--~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~e~~~ 215 (343)
.+.++.++++.++++++.... ...+....... ....++ +...+...+++..++.+.+. .+..+..++++++.+
T Consensus 307 ~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 385 (470)
T 3i6d_A 307 HSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWT-NKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIIN 385 (470)
T ss_dssp EEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEH-HHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHH
T ss_pred CCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEE-cCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHH
Confidence 899999999999998763321 12222211111 011222 11112223234455544332 223455778999999
Q ss_pred HHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCC----CCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHH
Q 019274 216 KAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 291 (343)
Q Consensus 216 ~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~----~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~ 291 (343)
.++++|+++||... ++....+.+|+++++.|.+|+... ++...++.+|||+||+++. | .+|++|+.||++
T Consensus 386 ~~~~~l~~~~g~~~--~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~-g---~gv~~a~~sG~~ 459 (470)
T 3i6d_A 386 IVLEDLKKVMNING--EPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFE-G---VGIPDCIDQGKA 459 (470)
T ss_dssp HHHHHHGGGSCCCS--CCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTS-C---CSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC--CceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCC-C---CCHHHHHHHHHH
Confidence 99999999998653 566778899999999999886432 1222245789999999875 2 369999999999
Q ss_pred HHHHHHHHh
Q 019274 292 AANRVVDYL 300 (343)
Q Consensus 292 aA~~il~~~ 300 (343)
+|++|++.+
T Consensus 460 aA~~i~~~l 468 (470)
T 3i6d_A 460 AVSDALTYL 468 (470)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999876
No 9
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.90 E-value=3e-23 Score=198.43 Aligned_cols=278 Identities=13% Similarity=0.085 Sum_probs=194.0
Q ss_pred CCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHH----------HhcC--------------CCceeEeecCCCc
Q 019274 5 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------LAHQ--------------KNFDLVWCRGTLR 60 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~----------~~~~--------------~~~~~~~~~gG~~ 60 (343)
++++++.+++++|++.++|+.+++++|+..++..+..+. .... ....+.+++||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~- 235 (475)
T 3lov_A 157 RLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGL- 235 (475)
T ss_dssp HHCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCH-
T ss_pred HhCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChH-
Confidence 467899999999999999999999999876655543321 0000 123456788995
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhcc
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 140 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~ 140 (343)
+.|+++|++.+.+ ++|+++++|++|..++ ++ +.|++.+++++||+||+|+|++.+.+|+++.. . +.+.+
T Consensus 236 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~-~~v~~~~g~~~ad~vV~a~p~~~~~~ll~~~~---~---~~~~~ 304 (475)
T 3lov_A 236 ESLIERLEEVLER--SEIRLETPLLAISRED--GR-YRLKTDHGPEYADYVLLTIPHPQVVQLLPDAH---L---PELEQ 304 (475)
T ss_dssp HHHHHHHHHHCSS--CEEESSCCCCEEEEET--TE-EEEECTTCCEEESEEEECSCHHHHHHHCTTSC---C---HHHHT
T ss_pred HHHHHHHHhhccC--CEEEcCCeeeEEEEeC--CE-EEEEECCCeEECCEEEECCCHHHHHHHcCccC---H---HHHhc
Confidence 6699999888754 7999999999999887 55 45777644899999999999999999887642 1 56678
Q ss_pred CcccceEEEEEEeccCCCCCCC-cceeecCCCCcc--ceEeeccccccccCCCCCeEEEEEee--CCCCCCCCCHHHHHH
Q 019274 141 LASIDVVSVKLWFDKKVTVPNV-SNACSGFGDSLA--WTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVA 215 (343)
Q Consensus 141 l~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~e~~~ 215 (343)
+.+.++.++++.|++++..+.. ...+.+.+.... ...++ +...+... |+..++.+.+. .+..+...+++++.+
T Consensus 305 ~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~-p~~~~l~~~~~~~~~~~~~~~~~e~~~~ 382 (475)
T 3lov_A 305 LTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSA-PDHTVLRAFVGRPGNDHLVHESDEVLQQ 382 (475)
T ss_dssp CCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTC-TTEEEEEEEECBTTBCGGGGSCHHHHHH
T ss_pred CCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCC-CCcEEEEEEeCCCCCCcccCCCHHHHHH
Confidence 8899999999999998732211 122222221110 11222 11112222 33333333332 223455678999999
Q ss_pred HHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCC----CCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHH
Q 019274 216 KAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 291 (343)
Q Consensus 216 ~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~----~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~ 291 (343)
.++++|+++||... +++...+.+|+.+++.|.+|+... ++...++.+||||||+++. + .+|++|+.||+.
T Consensus 383 ~~~~~L~~~~g~~~--~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~-g---~g~~~a~~sG~~ 456 (475)
T 3lov_A 383 AVLQDLEKICGRTL--EPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYD-G---VGLPDCVASAKT 456 (475)
T ss_dssp HHHHHHHHHHSSCC--CCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTS-C---SSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC--CCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCC-C---CCHHHHHHHHHH
Confidence 99999999998643 567778899999999999886421 1222246789999999975 2 479999999999
Q ss_pred HHHHHHHHhCC
Q 019274 292 AANRVVDYLGD 302 (343)
Q Consensus 292 aA~~il~~~~~ 302 (343)
+|++|++.++.
T Consensus 457 aA~~i~~~l~~ 467 (475)
T 3lov_A 457 MIESIELEQSH 467 (475)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHHhhc
Confidence 99999998763
No 10
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.89 E-value=1.6e-22 Score=194.49 Aligned_cols=277 Identities=12% Similarity=0.039 Sum_probs=189.4
Q ss_pred CCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHH--Hhc-CCCceeEeecCCCchhhhHHHHHHHHHcC-CeEEcc
Q 019274 6 CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAH-QKNFDLVWCRGTLREKIFEPWMDSMRTRG-CEFLDG 81 (343)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~--~~~-~~~~~~~~~~gG~~~~l~~~l~~~l~~~G-~~i~~~ 81 (343)
+++. .+.++++++...++.+++++|+..++..+.... +.. ........++||+ +.|+++|++.+++.| ++|+++
T Consensus 199 ~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~g~~~i~~~ 276 (495)
T 2vvm_A 199 LSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQ-SAFARRFWEEAAGTGRLGYVFG 276 (495)
T ss_dssp CCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCH-HHHHHHHHHHHHTTTCEEEESS
T ss_pred CCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCH-HHHHHHHHHHhhhcCceEEEeC
Confidence 4544 467999999999999999999988876654210 000 0011233568995 679999999999998 999999
Q ss_pred eeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCCCCC
Q 019274 82 RRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP 160 (343)
Q Consensus 82 ~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~ 160 (343)
++|++|..++ +.+ .|++. |++++||+||+|+|+..+.+|...+.++ ....+.++.+.+.++.++++.|+++++ .
T Consensus 277 ~~V~~i~~~~--~~v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp-~~~~~ai~~~~~~~~~kv~l~~~~~~~-~ 351 (495)
T 2vvm_A 277 CPVRSVVNER--DAA-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALS-TERISAMQAGHVSMCTKVHAEVDNKDM-R 351 (495)
T ss_dssp CCEEEEEECS--SSE-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCC-HHHHHHHHHCCCCCCEEEEEEESCGGG-G
T ss_pred CEEEEEEEcC--CEE-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCC-HHHHHHHHhcCCCceeEEEEEECCccC-C
Confidence 9999999876 444 57776 5689999999999999998875333332 344567788888899999999998765 2
Q ss_pred CCcceeecCCCCccceEeeccccccccCCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEe
Q 019274 161 NVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRR 240 (343)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r 240 (343)
.+..+...+....+ +++.... + ++..++.. +..... .+++++..+.+++.|++++|+.. ++....+.+
T Consensus 352 -~~~g~~~~~~~~~~-~~~~~~~-~----~~~~vl~~-~~~~~~--~~~~~e~~~~~~~~L~~~~~~~~--~~~~~~~~~ 419 (495)
T 2vvm_A 352 -SWTGIAYPFNKLCY-AIGDGTT-P----AGNTHLVC-FGNSAN--HIQPDEDVRETLKAVGQLAPGTF--GVKRLVFHN 419 (495)
T ss_dssp -GEEEEECSSCSSCE-EEEEEEC-T----TSCEEEEE-EECSTT--CCCTTTCHHHHHHHHHTTSTTSC--CEEEEEECC
T ss_pred -CceeEecCCCCcEE-EecCCCC-C----CCCeEEEE-EeCccc--cCCCHHHHHHHHHHHHHhcCCCC--CceEEEEeE
Confidence 22111111222222 3332211 1 23345443 433221 13455677889999999998743 566666778
Q ss_pred cCC------CccccCCCCCC-CCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCC
Q 019274 241 FPK------SLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 241 ~~~------~~~~~~~g~~~-~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
|.. ++..+.||... .++...++.+||||||+++.+.++ ++|+||+.||++||++|++.++.
T Consensus 420 W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~-g~veGAi~SG~raA~~i~~~l~~ 487 (495)
T 2vvm_A 420 WVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWR-SFIDGAIEEGTRAARVVLEELGT 487 (495)
T ss_dssp TTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSST-TSHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCc-eEEEhHHHHHHHHHHHHHHHhcc
Confidence 853 33334555431 223334578999999999986677 69999999999999999998864
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.89 E-value=8e-23 Score=196.94 Aligned_cols=282 Identities=13% Similarity=0.112 Sum_probs=191.0
Q ss_pred CCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHH--------------HhcC---------------CCceeEee
Q 019274 5 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--------------LAHQ---------------KNFDLVWC 55 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~--------------~~~~---------------~~~~~~~~ 55 (343)
++++++++++++|++.++++.+++++|+.++++.+.... +... ......++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (504)
T 1sez_A 159 HFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSF 238 (504)
T ss_dssp HHCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEE
T ss_pred HcCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEee
Confidence 478899999999999999999999999987655443321 0000 01124567
Q ss_pred cCCCchhhhHHHHHHHHHcC-CeEEcceeeeEEEecCCCCe----EEEEEEC---C---eEEecCEEEEeeChhhHHHhh
Q 019274 56 RGTLREKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCC----ISDVVCG---K---ETYSAGAVVLAVGISTLQELI 124 (343)
Q Consensus 56 ~gG~~~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~g~----v~~V~~~---g---~~~~ad~VV~a~p~~~~~~Ll 124 (343)
+||+ +.|+++|++.+ | ++|++|++|++|..+++ +. ++.|++. | ++++||+||+|+|+..+.+|+
T Consensus 239 ~GG~-~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~~-~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 239 LGGM-QTLTDAICKDL---REDELRLNSRVLELSCSCT-EDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMK 313 (504)
T ss_dssp TTCT-HHHHHHHHTTS---CTTTEETTCCEEEEEEECS-SSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSE
T ss_pred CcHH-HHHHHHHHhhc---ccceEEcCCeEEEEEecCC-CCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHh
Confidence 8995 67999998765 4 79999999999998773 31 2456553 3 478999999999999999887
Q ss_pred hh---hcccCchhHHhhccCcccceEEEEEEeccCCCCCC--CcceeecCCC-----CccceEeeccccccccCCCCCeE
Q 019274 125 KN---SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN--VSNACSGFGD-----SLAWTFFDLNKIYDEHKDDSATV 194 (343)
Q Consensus 125 ~~---~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~ 194 (343)
.. ..++ + ..+.++.+.++.++++.|+++++... .+..++.... .....+++ +...+...+++..+
T Consensus 314 ~~~~~~~~~-~---~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~-s~~~~~~~p~g~~~ 388 (504)
T 1sez_A 314 IAKRGNPFL-L---NFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFS-SMMFPDRAPNNVYL 388 (504)
T ss_dssp EESSSSBCC-C---TTSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEH-HHHCGGGSCTTEEE
T ss_pred hcccCCccc-H---HHHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEee-ccccCCcCCCCCEE
Confidence 42 1121 1 12566778889999999998765321 1222222110 00111222 22223233223334
Q ss_pred EEEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCC---CCCCCCCCeEEe
Q 019274 195 IQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMM---RGFTSFPNLFMA 269 (343)
Q Consensus 195 i~~~~~--~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p---~~~~~~~~L~la 269 (343)
+.+... .+..+..++++++.+.++++|++++|... +++...+.+|+.+++.|.+|+....+ ...++++|||||
T Consensus 389 l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~--~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~a 466 (504)
T 1sez_A 389 YTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEG--EPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYA 466 (504)
T ss_dssp EEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCS--CCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEEC
T ss_pred EEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCC--CCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEE
Confidence 333222 22346678899999999999999998743 56677788999998989888632211 122467999999
Q ss_pred eccccCCCCCccchHHHHHHHHHHHHHHHHhCC
Q 019274 270 GDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 270 Gd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
|+++. + .+|++|+.||++||++|++.++.
T Consensus 467 G~~~~---g-~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 467 GNHRG---G-LSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp CSSSS---C-SSHHHHHHHHHHHHHHHHHHHSS
T ss_pred eecCC---C-CCHHHHHHHHHHHHHHHHHHHhh
Confidence 99975 2 48999999999999999998864
No 12
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.88 E-value=3.1e-22 Score=191.36 Aligned_cols=280 Identities=12% Similarity=0.099 Sum_probs=178.0
Q ss_pred HHhHHHHHH-hhhcCCcccccHHHHHHHHHHHHHhcCCCceeEeecCCCchhhhHHHHHHHHHc--------CCeEEcce
Q 019274 12 RNVIGPLVQ-VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR--------GCEFLDGR 82 (343)
Q Consensus 12 ~~~~~~~~~-~~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~--------G~~i~~~~ 82 (343)
+.++++++. ..++.+++..|+..+... ..+. .......+.+++||+ +.|+++|++.+.+. |++|++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~-~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~ 235 (472)
T 1b37_A 159 DMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATFS-DFGDDVYFVADQRGY-EAVVYYLAGQYLKTDDKSGKIVDPRLQLNK 235 (472)
T ss_dssp HHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHHH-HHCSEEEEECCTTCT-THHHHHHHHTTSCBCTTTCCBCCTTEESSC
T ss_pred HHHHHHHHHhhhhcccccccchhhcccc-cccc-ccCCceeeeecCCcH-HHHHHHHHHhccccccccccccccEEEcCC
Confidence 445555553 334556666664322111 0010 111112233347895 67999999888665 78999999
Q ss_pred eeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHHHhhh--hhcccCchhHHhhccCcccceEEEEEEeccCCCC
Q 019274 83 RVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIK--NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTV 159 (343)
Q Consensus 83 ~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~~Ll~--~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~ 159 (343)
+|++|..++ +++. |++. |++++||+||+|+|+..+.+++. .+.++ ....+.++++.+.++.++++.|++++|.
T Consensus 236 ~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp-~~~~~ai~~~~~~~~~kv~l~~~~~~w~ 311 (472)
T 1b37_A 236 VVREIKYSP--GGVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLP-TWKVRAIYQFDMAVYTKIFLKFPRKFWP 311 (472)
T ss_dssp CEEEEEECS--SCEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCC-HHHHHHHHHSEEECEEEEEEECSSCCSC
T ss_pred EEEEEEEcC--CcEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCC-HHHHHHHHhcCCcceeEEEEECCCcCCC
Confidence 999999887 5554 7776 56899999999999999987542 22232 3445777888888889999999998874
Q ss_pred CCC-cceee-cCCC-CccceEeeccccccccCCCCCeEEEEEeeC--CCCCCCCCHHHHHHHHHHHHhhhcccCCCCcee
Q 019274 160 PNV-SNACS-GFGD-SLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 234 (343)
Q Consensus 160 ~~~-~~~~~-~~~~-~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~ 234 (343)
..+ ...+. .... .... ++.. ..+. . +++.++.+.+.. +..|..++++++.+.+++.|+++||+....+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~-p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~ 386 (472)
T 1b37_A 312 EGKGREFFLYASSRRGYYG-VWQE--FEKQ-Y-PDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDAT 386 (472)
T ss_dssp CSTTCSEEEECCSSTTSSC-EEEE--CTTT-S-TTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCS
T ss_pred CCCCcceEEecccCCccce-eeec--ccCC-C-CCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCc
Confidence 322 11111 1111 1111 2221 0111 1 344554443322 123556789999999999999999885322455
Q ss_pred eeEEEecC------CCccccCCCCCC-CCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCCCC
Q 019274 235 DHKIRRFP------KSLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGS 304 (343)
Q Consensus 235 ~~~~~r~~------~~~~~~~~g~~~-~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~~~ 304 (343)
...+.+|. .++..+.||... .++...+|++||||||++++++++ ++|+||+.||++||++|++.++.++
T Consensus 387 ~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~-g~v~GA~~SG~~aA~~i~~~l~~~~ 462 (472)
T 1b37_A 387 DILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYN-GYVHGAYLSGIDSAEILINCAQKKM 462 (472)
T ss_dssp EEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTT-TSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCC-CchhHHHHHHHHHHHHHHHHHHhCc
Confidence 55566672 233334555432 233445788999999999987666 6999999999999999999876433
No 13
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.87 E-value=1.2e-20 Score=172.84 Aligned_cols=228 Identities=11% Similarity=0.098 Sum_probs=158.8
Q ss_pred eecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhh--ccc
Q 019274 54 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNS--ILC 130 (343)
Q Consensus 54 ~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~~Ll~~~--~~~ 130 (343)
...+|+ +.++++|++.+ |++|+++++|++|..++ ++ +.|+++ |++++||.||+|+|++.+.+|+.+. .+
T Consensus 106 ~~~~g~-~~l~~~l~~~~---g~~i~~~~~V~~i~~~~--~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l- 177 (342)
T 3qj4_A 106 VAPQGI-SSIIKHYLKES---GAEVYFRHRVTQINLRD--DK-WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI- 177 (342)
T ss_dssp ECTTCT-THHHHHHHHHH---TCEEESSCCEEEEEECS--SS-EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS-
T ss_pred ecCCCH-HHHHHHHHHhc---CCEEEeCCEEEEEEEcC--CE-EEEEECCCCEEEcCEEEECCCHHHHHHHhccccccc-
Confidence 346785 56888888765 89999999999999877 44 457776 5568999999999999999888642 22
Q ss_pred CchhHHhhccCcccceEEEEEEeccCCCCCCCcceeecCC-CCccceEeeccccccccCCCCCeEEEEEee--CCCCCCC
Q 019274 131 NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG-DSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMP 207 (343)
Q Consensus 131 ~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~--~~~~~~~ 207 (343)
++...+.+.++.|.++.++++.|+++++.+.+...++..+ ....|.+++ +.......++++..+.+... .+.++.+
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~k~~r~~~~~~~~~v~~~~~~~~~~~~~ 256 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSID-NKKRNIESSEIGPSLVIHTTVPFGVTYLE 256 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEH-HHHTTCCCC-CCCEEEEEECHHHHHHTTT
T ss_pred CHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEcc-ccCCCCCCCCCCceEEEECCHHHHHHhhc
Confidence 2344677889999999999999998755444432222112 223443333 32211111123333322222 2234667
Q ss_pred CCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCCC--CCCCCeEEeeccccCCCCCccchHH
Q 019274 208 LKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF--TSFPNLFMAGDWITTRHGSWSQERS 285 (343)
Q Consensus 208 ~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~~--~~~~~L~laGd~~~~g~~~~~~ega 285 (343)
.+++++.+.++++|++++|... ++++..++||+.++|.+... .++... ...+||++||||+.+ .++|+|
T Consensus 257 ~~~~~~~~~~~~~l~~~~g~~~--~p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g----~~v~~a 327 (342)
T 3qj4_A 257 HSIEDVQELVFQQLENILPGLP--QPIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ----SNFDGC 327 (342)
T ss_dssp SCHHHHHHHHHHHHHHHSCSCC--CCSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC----SSHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCCC--CCceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC----CCccHH
Confidence 8899999999999999999554 57788899999999877542 123222 356899999999863 589999
Q ss_pred HHHHHHHHHHHHHH
Q 019274 286 YVTGLEAANRVVDY 299 (343)
Q Consensus 286 ~~Sg~~aA~~il~~ 299 (343)
+.||+.||+.|+..
T Consensus 328 i~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 328 ITSALCVLEALKNY 341 (342)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999764
No 14
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.84 E-value=9.7e-21 Score=182.55 Aligned_cols=284 Identities=12% Similarity=0.072 Sum_probs=185.9
Q ss_pred CCCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHH---------HHHHHHhcCC-----CceeEe-ecCCCchhhhHHHH
Q 019274 4 FGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGI---------LYFIILAHQK-----NFDLVW-CRGTLREKIFEPWM 68 (343)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~---------l~~~~~~~~~-----~~~~~~-~~gG~~~~l~~~l~ 68 (343)
+++++++++.++.|++.++++.+++++++.++... +......... ...+.+ ++||+ +.|+++|+
T Consensus 151 ~~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~ 229 (513)
T 4gde_A 151 RMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGT-GGIWIAVA 229 (513)
T ss_dssp HHHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHH-HHHHHHHH
T ss_pred HhhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCH-HHHHHHHH
Confidence 45678999999999999999999999997654321 1111111111 122333 47995 67999999
Q ss_pred HHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEE
Q 019274 69 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVS 148 (343)
Q Consensus 69 ~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~ 148 (343)
+.|++.|++|++|++|++|..++ +++ +..+|++++||+||+|+|++.+.+++.+. ........+.|.++.+
T Consensus 230 ~~l~~~g~~i~~~~~V~~I~~~~--~~v--~~~~G~~~~ad~vI~t~P~~~l~~~l~~~-----~~~~~~~~l~y~~~~~ 300 (513)
T 4gde_A 230 NTLPKEKTRFGEKGKVTKVNANN--KTV--TLQDGTTIGYKKLVSTMAVDFLAEAMNDQ-----ELVGLTKQLFYSSTHV 300 (513)
T ss_dssp HTSCGGGEEESGGGCEEEEETTT--TEE--EETTSCEEEEEEEEECSCHHHHHHHTTCH-----HHHHHHTTCCEEEEEE
T ss_pred HHHHhcCeeeecceEEEEEEccC--CEE--EEcCCCEEECCEEEECCCHHHHHHhcCch-----hhHhhhhcccCCceEE
Confidence 99999999999999999999876 543 23347899999999999999999888753 2234557788999988
Q ss_pred EEEEeccCCCCCCCcceeecC-CCCc-cceEeeccccccccCCCC---------------------CeEEEEEe--eCCC
Q 019274 149 VKLWFDKKVTVPNVSNACSGF-GDSL-AWTFFDLNKIYDEHKDDS---------------------ATVIQADF--YHAN 203 (343)
Q Consensus 149 v~l~~~~~~~~~~~~~~~~~~-~~~~-~~~~~d~~~~~~~~~~~~---------------------~~~i~~~~--~~~~ 203 (343)
+.+.++...........++-+ +... ...+...++..+...+++ ...+.+.+ ....
T Consensus 301 v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (513)
T 4gde_A 301 IGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSES 380 (513)
T ss_dssp EEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEB
T ss_pred EEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccch
Confidence 999887754321111111111 1110 000111111111111111 11111111 1223
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCC----CCCCCCCCCCeEEeeccccCCCCC
Q 019274 204 ELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRHGS 279 (343)
Q Consensus 204 ~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~----~p~~~~~~~~L~laGd~~~~g~~~ 279 (343)
++..++++++++.++++|.++.+-....+++...+.||++++|.|+.|+... ++..+ -+|||++|-+-.-.|..
T Consensus 381 ~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~--~~~l~~~GR~g~~~Y~~ 458 (513)
T 4gde_A 381 SMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQ--DKDIWSRGRFGSWRYEV 458 (513)
T ss_dssp TTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH--HTTEEECSTTTTCCGGG
T ss_pred hccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHh--hcCcEEecCCcccCcCC
Confidence 4556789999999999999998755444788888999999999999886532 12222 26999999652112221
Q ss_pred ccchHHHHHHHHHHHHHHHH
Q 019274 280 WSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 280 ~~~ega~~Sg~~aA~~il~~ 299 (343)
+.|+.|++||+.||+.|+..
T Consensus 459 ~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 459 GNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp CSHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHcC
Confidence 47999999999999999973
No 15
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.83 E-value=1.1e-20 Score=181.02 Aligned_cols=280 Identities=11% Similarity=0.036 Sum_probs=184.9
Q ss_pred CCCHHHHHHhHHHHHHhhhcCCcccccHHHHH---------HHHHHHHHhcC------CCceeEeec-CCCchhhhHHHH
Q 019274 5 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATL---------GILYFIILAHQ------KNFDLVWCR-GTLREKIFEPWM 68 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~---------~~l~~~~~~~~------~~~~~~~~~-gG~~~~l~~~l~ 68 (343)
++++++++++++|++.++|+.+++++|+.+++ .++...+ ... ....+.||. ||+ +.|+++|+
T Consensus 146 ~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~-~~~~~~~~~~~~~f~yp~~gG~-~~l~~~la 223 (484)
T 4dsg_A 146 QFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQ-ENRDDLGWGPNATFRFPQRGGT-GIIYQAIK 223 (484)
T ss_dssp HHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHH-HTCCCCCCSTTSEEEEESSSCT-HHHHHHHH
T ss_pred HhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHh-hcccccCCCccceEEeecCCCH-HHHHHHHH
Confidence 46788899999999999999999999986432 2222222 211 122356665 885 67999999
Q ss_pred HHHHHcCCeEEcc--eeeeEEEecCCCCeEEEEEE-CCeEEecCEEEEeeChhhHHHhhhhh--cccCchhHHhhccCcc
Q 019274 69 DSMRTRGCEFLDG--RRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNS--ILCNREEFLKVLNLAS 143 (343)
Q Consensus 69 ~~l~~~G~~i~~~--~~V~~I~~~~~~g~v~~V~~-~g~~~~ad~VV~a~p~~~~~~Ll~~~--~~~~~~~~~~~~~l~~ 143 (343)
+.+.+ .+|+++ ++|++|..++ ++| ++ +|++++||+||+|+|++.+.+++.+. .+ ++...+.+.++.|
T Consensus 224 ~~l~~--~~i~~~~~~~V~~I~~~~--~~v---~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~-~~~~~~~l~~l~y 295 (484)
T 4dsg_A 224 EKLPS--EKLTFNSGFQAIAIDADA--KTI---TFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKG-YDEWPAIADKMVY 295 (484)
T ss_dssp HHSCG--GGEEECGGGCEEEEETTT--TEE---EETTSCEEECSEEEECSCHHHHHHHEECSSCTT-GGGHHHHHHHCCE
T ss_pred hhhhh--CeEEECCCceeEEEEecC--CEE---EECCCCEEECCEEEECCCHHHHHHHhhccCCCC-CHHHHHHHhCCCc
Confidence 98854 289999 5699999877 543 34 46789999999999999999988641 12 1344566788999
Q ss_pred cceEEEEEEeccCCCC--CCCcceeecCCCCccceEeeccccccccCCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHHH
Q 019274 144 IDVVSVKLWFDKKVTV--PNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYL 221 (343)
Q Consensus 144 ~~~~~v~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~L 221 (343)
.++.++++.++++... ...+..++.........+...++..+...+++.+++.+.+... .....+++++++.++++|
T Consensus 296 ~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~-~~~~~~d~~l~~~a~~~L 374 (484)
T 4dsg_A 296 SSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES-KYKPVNHSTLIEDCIVGC 374 (484)
T ss_dssp EEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB-TTBCCCTTSHHHHHHHHH
T ss_pred CceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC-cCCcCCHHHHHHHHHHHH
Confidence 9999999999987431 1122333321111111122223333433323445544444333 334568899999999999
Q ss_pred hhhcccCCCCceeeeEEEecCCCccccCCCCCCCC----CCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHH
Q 019274 222 SKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYM----MRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 297 (343)
Q Consensus 222 ~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~----p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il 297 (343)
.++..--.+..++...+.||+.++|.|++|+.... .... .. ||+++|.+-.-.|++.+|+.|+.||..||+.|+
T Consensus 375 ~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~-~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 375 LASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELM-SR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH-HT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred HHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHH-hC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 99853212213555678899999999999865321 1111 23 999999963212321479999999999999997
No 16
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.80 E-value=5.7e-19 Score=169.39 Aligned_cols=235 Identities=11% Similarity=0.104 Sum_probs=154.4
Q ss_pred eeEeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C---eEEecCEEEEeeChhhHHHhhhh
Q 019274 51 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K---ETYSAGAVVLAVGISTLQELIKN 126 (343)
Q Consensus 51 ~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g---~~~~ad~VV~a~p~~~~~~Ll~~ 126 (343)
.+.+++||+ +.|+++|++.+.+ ++|++|++|++|..++ ++|. |++. | ++++||+||+|+|+..+.+|..
T Consensus 230 ~~~~~~gG~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~- 302 (489)
T 2jae_A 230 MMFTPVGGM-DRIYYAFQDRIGT--DNIVFGAEVTSMKNVS--EGVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQN- 302 (489)
T ss_dssp SEEEETTCT-THHHHHHHHHHCG--GGEETTCEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEE-
T ss_pred cEEeecCCH-HHHHHHHHHhcCC--CeEEECCEEEEEEEcC--CeEE-EEEecCCeEEEEECCEEEECCCHHHHHhCcc-
Confidence 456688995 6799999988743 7899999999999887 5554 6553 4 5789999999999998877755
Q ss_pred hcccCchhHHhhccCcccceEEEEEEeccCCCCCC-C-cceeecCCCCccceEeeccccccccCCCCCeEEEEEee--CC
Q 019274 127 SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-V-SNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HA 202 (343)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~--~~ 202 (343)
.+ +....+.++++.+.++.++++.|++++|... . ++.+...+..... ++..+.. +..+.+.++.+... ..
T Consensus 303 -~l-~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~-~~~~s~~---~~~~~~~l~~~~~~g~~~ 376 (489)
T 2jae_A 303 -NL-PGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQ-IMFPYDH---YNSDRGVVVAYYSSGKRQ 376 (489)
T ss_dssp -CC-CHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCE-EECCSSS---TTSSCEEEEEEEEETHHH
T ss_pred -CC-CHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceE-EEeCCCC---CCCCCCEEEEEeeCCchh
Confidence 22 2345567788889999999999999875322 1 1011111111111 2221211 11123333322222 12
Q ss_pred CCCCCCCHHHHHHHHHHHHhhhccc-CCCCceeeeEEEecCCCcc------ccC------CCCCC-CCCCCCCCCCCeEE
Q 019274 203 NELMPLKDDQVVAKAVSYLSKCIKD-FSTATVMDHKIRRFPKSLT------HFF------PGSYK-YMMRGFTSFPNLFM 268 (343)
Q Consensus 203 ~~~~~~~~~e~~~~~~~~L~~~~p~-~~~~~~~~~~~~r~~~~~~------~~~------~g~~~-~~p~~~~~~~~L~l 268 (343)
..|..++++++.+.+++.|++++|+ +.. ++....+.+|....+ .+. |+... .++...++.+||||
T Consensus 377 ~~~~~~~~~~~~~~~l~~L~~~~~~~~~~-~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f 455 (489)
T 2jae_A 377 EAFESLTHRQRLAKAIAEGSEIHGEKYTR-DISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYF 455 (489)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHCGGGGS-SEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHHHcCcchhh-hccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEE
Confidence 3456678999999999999999997 554 566666777855421 111 33211 12223457899999
Q ss_pred eeccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 269 AGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 269 aGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
||+++.. ++ ++|+||+.||++||++|++.+.
T Consensus 456 aG~~~~~-~~-~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 456 AGDHLSN-AI-AWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp CSGGGBS-ST-TSHHHHHHHHHHHHHHHHHHHH
T ss_pred eEHHhcc-Cc-cHHHHHHHHHHHHHHHHHHHHh
Confidence 9999852 44 6999999999999999998754
No 17
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.79 E-value=5.9e-18 Score=170.62 Aligned_cols=228 Identities=18% Similarity=0.195 Sum_probs=155.3
Q ss_pred EeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-------CeEEecCEEEEeeChhhHHHhhh
Q 019274 53 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-------KETYSAGAVVLAVGISTLQELIK 125 (343)
Q Consensus 53 ~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-------g~~~~ad~VV~a~p~~~~~~Ll~ 125 (343)
..++||+ +.|+++|++ +.+|++|++|++|..++ +.| .|++. +++++||+||+|+|+..+.+++.
T Consensus 565 ~~~~gG~-~~L~~aLa~-----~l~I~Lnt~V~~I~~~~--~gV-~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~ 635 (852)
T 2xag_A 565 LTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTA--SGC-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 635 (852)
T ss_dssp EEETTCT-THHHHHHTT-----TCCEECSEEEEEEEEET--TEE-EEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred EEecCcH-HHHHHHHHh-----CCCEEeCCeEEEEEEcC--CcE-EEEEeecccCCCCeEEECCEEEECCCHHHHHhhhc
Confidence 4567995 668888875 34799999999999987 444 45542 35799999999999999987422
Q ss_pred ----hhcccCchhHHhhccCcccceEEEEEEeccCCCCCCCcceeecCC------CCccceEeeccccccccCCCCCeEE
Q 019274 126 ----NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG------DSLAWTFFDLNKIYDEHKDDSATVI 195 (343)
Q Consensus 126 ----~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~i 195 (343)
.+.++ ....+.++++.+.++.+++|.|++++|.. ... .+|+. ......+++.. +..++
T Consensus 636 ~I~F~P~LP-~~k~~AI~~l~~g~v~KV~L~F~~~fW~~-~~~-~fG~l~~~~~~~~~l~~~~~~~---------~~pvL 703 (852)
T 2xag_A 636 AVQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY---------KAPIL 703 (852)
T ss_dssp SSEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCT-TCC-EEEECCSSSTTTTTTCEEEECS---------SSSEE
T ss_pred ccccCCCCC-HHHHHHHHcCCccceEEEEEEcCCcccCC-CCC-eeeeeccccCCCCceEEEecCC---------CCCEE
Confidence 12232 33456788899999999999999998843 212 22211 01112234321 11243
Q ss_pred EEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCC------ccccCCCCCCC------CC----
Q 019274 196 QADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS------LTHFFPGSYKY------MM---- 257 (343)
Q Consensus 196 ~~~~~--~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~------~~~~~~g~~~~------~p---- 257 (343)
.+.+. .+..+..++++++.+.++++|+++|+.....+++...+.+|... +..+.||.... .|
T Consensus 704 l~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~ 783 (852)
T 2xag_A 704 LALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPG 783 (852)
T ss_dssp EEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCC
T ss_pred EEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccc
Confidence 33222 23345678899999999999999998643225677778889653 22234554211 11
Q ss_pred ----CCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCC
Q 019274 258 ----RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 258 ----~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
....+.++|||||+++...++ ++|+||+.||.+||++|+..+..
T Consensus 784 ~~~p~~~~~~grL~FAGE~Ts~~~~-gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 784 PSIPGAPQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CSSTTCCCCCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccccCCCCcEEEEehhHhCCCC-cCHHHHHHHHHHHHHHHHHHhhC
Confidence 123456899999999987677 79999999999999999998864
No 18
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.78 E-value=3.7e-18 Score=169.29 Aligned_cols=227 Identities=19% Similarity=0.211 Sum_probs=152.4
Q ss_pred EeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-------CeEEecCEEEEeeChhhHHHhh-
Q 019274 53 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-------KETYSAGAVVLAVGISTLQELI- 124 (343)
Q Consensus 53 ~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-------g~~~~ad~VV~a~p~~~~~~Ll- 124 (343)
..++||+ +.|+++|++ +.+|++|++|++|..++ +.| .|++. +++++||+||+|+|+..+.++.
T Consensus 394 ~~~~gG~-~~l~~~La~-----~l~I~l~~~V~~I~~~~--~~v-~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~ 464 (662)
T 2z3y_A 394 LTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTA--SGC-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 464 (662)
T ss_dssp EEETTCT-THHHHHHTT-----TCEEETTEEEEEEEEET--TEE-EEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred eeecCcH-HHHHHHHHh-----cCceecCCeEEEEEECC--CcE-EEEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence 4567995 678888875 45899999999999987 444 45542 3579999999999999998742
Q ss_pred ---hhhcccCchhHHhhccCcccceEEEEEEeccCCCCCCCcceeecC-CC---Cc--cceEeeccccccccCCCCCeEE
Q 019274 125 ---KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGF-GD---SL--AWTFFDLNKIYDEHKDDSATVI 195 (343)
Q Consensus 125 ---~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~-~~---~~--~~~~~d~~~~~~~~~~~~~~~i 195 (343)
-.+.++ ....++++++.+.++.++++.|++++|.. ... .++. .. .. ...+++.+ +..++
T Consensus 465 ~i~f~P~LP-~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~-~~~-~~G~l~~~~~~~~~~~~~~~~~---------~~~vL 532 (662)
T 2z3y_A 465 AVQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY---------KAPIL 532 (662)
T ss_dssp SSEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCT-TCS-EEEECCSSSTTTTEEEEEECCS---------SSSEE
T ss_pred ceEEcCCCC-HHHHHHHHhCCccceeEEEEEcCcccccC-CCC-ceeeecCCCCCCCceeEEEeCC---------CCCEE
Confidence 112232 33457788999999999999999999843 212 2221 11 11 11122211 12344
Q ss_pred EEEee--CCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCC------ccccCCCCCCC------CC----
Q 019274 196 QADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS------LTHFFPGSYKY------MM---- 257 (343)
Q Consensus 196 ~~~~~--~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~------~~~~~~g~~~~------~p---- 257 (343)
...+. .+..+..++++++.+.++++|+++|+.....+++...+.+|... +..+.||.... .|
T Consensus 533 ~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~ 612 (662)
T 2z3y_A 533 LALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPG 612 (662)
T ss_dssp EEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC-
T ss_pred EEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccc
Confidence 33222 22345678999999999999999998643225667778889654 22234453210 11
Q ss_pred ----CCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 258 ----RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 258 ----~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
....+.++|||||+++...++ ++|+||+.||++||++|++.++
T Consensus 613 ~~~~~~~~~~grl~FAGe~ts~~~~-g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 613 PSIPGAPQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp --------CCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCcEEEEeccccCCCC-cCHHHHHHHHHHHHHHHHHHcc
Confidence 122356899999999987677 7999999999999999998765
No 19
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.77 E-value=7.5e-18 Score=161.93 Aligned_cols=234 Identities=13% Similarity=0.064 Sum_probs=152.7
Q ss_pred eEeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-Ce----EEecCEEEEeeChhhHHHhhhh
Q 019274 52 LVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE----TYSAGAVVLAVGISTLQELIKN 126 (343)
Q Consensus 52 ~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~----~~~ad~VV~a~p~~~~~~Ll~~ 126 (343)
+..++||+ +.|+++|++.+.+ +|++|++|++|..++ ++| .|++. ++ +++||+||+|+|+..+.++.-.
T Consensus 233 ~~~~~gG~-~~l~~~l~~~l~~---~i~~~~~V~~I~~~~--~~v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~ 305 (498)
T 2iid_A 233 FDEIVDGM-DKLPTAMYRDIQD---KVHFNAQVIKIQQND--QKV-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFN 305 (498)
T ss_dssp EEEETTCT-THHHHHHHHHTGG---GEESSCEEEEEEECS--SCE-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEE
T ss_pred eEEeCCcH-HHHHHHHHHhccc---ccccCCEEEEEEECC--CeE-EEEEecCCcccceEEeCEEEECCChHHHhheecC
Confidence 45678995 6799999988753 899999999999887 554 46553 33 4799999999999987766433
Q ss_pred hcccCchhHHhhccCcccceEEEEEEeccCCCCCCCc-ceeecCCCCccceEeeccccccccCCCCCeEEEEEee--CCC
Q 019274 127 SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVS-NACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HAN 203 (343)
Q Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~--~~~ 203 (343)
+.++ ....+.++++.+.+..++++.|++++|..... ......+....+.+++ +.. .+ ++..++..... .+.
T Consensus 306 p~Lp-~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-s~~---~p-~g~~~L~~~~~g~~a~ 379 (498)
T 2iid_A 306 PPLL-PKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYP-NHN---FT-NGVGVIIAYGIGDDAN 379 (498)
T ss_dssp SCCC-HHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEECC-SSC---CT-TSCEEEEEEEEHHHHH
T ss_pred CCCC-HHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCCcccCCCCcceEEEC-CCC---CC-CCCcEEEEEeCCccHh
Confidence 3342 34567788899999999999999998743210 0110011111122222 111 11 23445443222 234
Q ss_pred CCCCCCHHHHHHHHHHHHhhhcccCCC---CceeeeEEEecCCCccccCCCCCC---------CCCCCCCCCCCeEEeec
Q 019274 204 ELMPLKDDQVVAKAVSYLSKCIKDFST---ATVMDHKIRRFPKSLTHFFPGSYK---------YMMRGFTSFPNLFMAGD 271 (343)
Q Consensus 204 ~~~~~~~~e~~~~~~~~L~~~~p~~~~---~~~~~~~~~r~~~~~~~~~~g~~~---------~~p~~~~~~~~L~laGd 271 (343)
.+..++++++.+.++++|+++++...+ .......+.+|... .|..|++. ..+....+.+||||||+
T Consensus 380 ~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~~~~~~~~~~W~~~--p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe 457 (498)
T 2iid_A 380 FFQALDFKDCADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLD--KYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGE 457 (498)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHHTCCHHHHHHHEEEEEEEEGGGC--TTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSG
T ss_pred hhhcCCHHHHHHHHHHHHHHHcCCChhhhhhhcCccEEEecCCC--CCCCceeeecCCcchHHHHHHHhCCCCcEEEEEc
Confidence 566788999999999999999973211 01123456678542 22333321 11222356889999999
Q ss_pred cccCCCCCccchHHHHHHHHHHHHHHHHhCC
Q 019274 272 WITTRHGSWSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 272 ~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
++...+ ++|+||+.||++||++|++.++.
T Consensus 458 ~t~~~~--g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 458 YTAQAH--GWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp GGSSSS--SCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccCC--cCHHHHHHHHHHHHHHHHHHhcC
Confidence 986444 58999999999999999998864
No 20
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.76 E-value=8.3e-17 Score=151.73 Aligned_cols=258 Identities=12% Similarity=0.080 Sum_probs=167.3
Q ss_pred HHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHH------HhcCCCceeEeecCCCchhhhHHHHHHHHHcCCeEEcce
Q 019274 9 RLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII------LAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGR 82 (343)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~------~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~ 82 (343)
+....++.+++...++.+++++|+..++.++.... +.. ... .+.+|+ ..+++.++ ++.| +|++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~g~-~~l~~~~~---~~~g-~i~~~~ 224 (431)
T 3k7m_X 154 PVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLS---LDE-VFSNGS-ADLVDAMS---QEIP-EIRLQT 224 (431)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHT---CCE-EETTCT-HHHHHHHH---TTCS-CEESSC
T ss_pred HHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecc---hhh-hcCCcH-HHHHHHHH---hhCC-ceEeCC
Confidence 34455778889999999999999998877665320 011 111 457885 45666654 3446 999999
Q ss_pred eeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCCCCCC
Q 019274 83 RVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN 161 (343)
Q Consensus 83 ~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~ 161 (343)
+|++|..++ ++| .|++. |++++||+||+|+|+..+.++.-.+.++ ....+.+..+.+...+++.+.++++++
T Consensus 225 ~V~~i~~~~--~~v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~-~~~~~~~~~~~~~~~~kv~~~~~~~~~--- 297 (431)
T 3k7m_X 225 VVTGIDQSG--DVV-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP-ERRRSVIEEGHGGQGLKILIHVRGAEA--- 297 (431)
T ss_dssp CEEEEECSS--SSE-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHHHHCCCCCEEEEEEEEESCCT---
T ss_pred EEEEEEEcC--CeE-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCC-HHHHHHHHhCCCcceEEEEEEECCCCc---
Confidence 999999877 444 47776 5679999999999999988764333332 334466666777778899999998763
Q ss_pred CcceeecCCCCccceEeeccccccccCCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEec
Q 019274 162 VSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRF 241 (343)
Q Consensus 162 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~ 241 (343)
+ +++.+......+++.... . .++.++ +.+.....+...+. +.+.+.|++++|+. .++.....+|
T Consensus 298 --~-i~~~~d~~~~~~~~~~~~----~-~~~~~l-~~~~~g~~~~~~~~----~~~~~~l~~~~~~~---~~~~~~~~~W 361 (431)
T 3k7m_X 298 --G-IECVGDGIFPTLYDYCEV----S-ESERLL-VAFTDSGSFDPTDI----GAVKDAVLYYLPEV---EVLGIDYHDW 361 (431)
T ss_dssp --T-EEEEBSSSSSEEEEEEEC----S-SSEEEE-EEEEETTTCCTTCH----HHHHHHHHHHCTTC---EEEEEECCCT
T ss_pred --C-ceEcCCCCEEEEEeCcCC----C-CCCeEE-EEEeccccCCCCCH----HHHHHHHHHhcCCC---CccEeEeccc
Confidence 1 222222222223443321 0 123333 33333333333332 34667888889875 3555555678
Q ss_pred CC------CccccCCCCC-CCCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 242 PK------SLTHFFPGSY-KYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 242 ~~------~~~~~~~g~~-~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.. ++..+.||.. ..++....|.++|||||..+...++ ++|+||+.||++||++|+..
T Consensus 362 ~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~-g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 362 IADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFP-GYIEGALETAECAVNAILHS 425 (431)
T ss_dssp TTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSST-TSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCC-eEehHHHHHHHHHHHHHHhh
Confidence 43 2223445653 3345555688999999998887777 79999999999999999874
No 21
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.71 E-value=7.6e-17 Score=161.50 Aligned_cols=229 Identities=17% Similarity=0.176 Sum_probs=148.4
Q ss_pred EeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHHHh-h-hhhcc
Q 019274 53 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQEL-I-KNSIL 129 (343)
Q Consensus 53 ~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~~L-l-~~~~~ 129 (343)
....+|+ +.++++|++ |++|+++++|++|..++ ++| .|++. |++++||+||+|+|+..+.+. + -.+.+
T Consensus 527 ~~~~~G~-~~l~~aLa~-----gl~I~l~t~V~~I~~~~--~~v-~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~L 597 (776)
T 4gut_A 527 TLLTPGY-SVIIEKLAE-----GLDIQLKSPVQCIDYSG--DEV-QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPL 597 (776)
T ss_dssp EECTTCT-HHHHHHHHT-----TSCEESSCCEEEEECSS--SSE-EEEETTCCEEEESEEEECCCHHHHHTTCSEEESCC
T ss_pred EEECChH-HHHHHHHHh-----CCcEEcCCeeEEEEEcC--CEE-EEEECCCcEEEcCEEEECCCHHHHhhcccccCCCC
Confidence 3456774 557766653 77999999999999887 444 47765 668999999999999998752 1 11223
Q ss_pred cCchhHHhhccCcccceEEEEEEeccCCCCCC-CcceeecCCC------CccceEeeccccccccCCCCCeEEEEEeeC-
Q 019274 130 CNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-VSNACSGFGD------SLAWTFFDLNKIYDEHKDDSATVIQADFYH- 201 (343)
Q Consensus 130 ~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~-~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~- 201 (343)
+ ....+.+.++.+.++.++.+.|++++|... ....+++... .....+++.+ + ..+..++...+..
T Consensus 598 p-~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~---p---~g~~~vL~~~i~G~ 670 (776)
T 4gut_A 598 S-EKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMD---P---QKKHSVLMSVIAGE 670 (776)
T ss_dssp C-HHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESC---T---TSCSCEEEEEECTH
T ss_pred C-HHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCC---C---CCCceEEEEEecch
Confidence 2 344577788888889999999999988431 0111222211 0111123321 1 0122344333322
Q ss_pred -CCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCCcc------ccCCCCCC-CCCCCCCC-CCCeEEeecc
Q 019274 202 -ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLT------HFFPGSYK-YMMRGFTS-FPNLFMAGDW 272 (343)
Q Consensus 202 -~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~------~~~~g~~~-~~p~~~~~-~~~L~laGd~ 272 (343)
+..+..++++++.+.++++|+++||.....+++...+.+|....+ .+.||... ..+....+ .++|||||++
T Consensus 671 ~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~ 750 (776)
T 4gut_A 671 AVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEA 750 (776)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGG
T ss_pred hHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehh
Confidence 234567899999999999999999864322566667778854321 12233221 11111224 3789999999
Q ss_pred ccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 273 ITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 273 ~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
++..++ ++|+||+.||.+||++|++
T Consensus 751 Ts~~~~-gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 751 TNRHFP-QTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp GCSSSC-SSHHHHHHHHHHHHHHHHC
T ss_pred hcCCCC-cCHHHHHHHHHHHHHHHHh
Confidence 997788 6999999999999999975
No 22
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.66 E-value=2.5e-15 Score=145.07 Aligned_cols=240 Identities=13% Similarity=0.123 Sum_probs=140.4
Q ss_pred EeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHHHh--------
Q 019274 53 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQEL-------- 123 (343)
Q Consensus 53 ~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~~L-------- 123 (343)
.+++| .+.|+++|++.+. +++|++|++|++|..+++ +. +.|++. |++++||+||+|+|+..+...
T Consensus 196 ~~~~g--~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~-~~-v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~ 269 (516)
T 1rsg_A 196 AFALN--YDSVVQRIAQSFP--QNWLKLSCEVKSITREPS-KN-VTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLR 269 (516)
T ss_dssp EEESC--HHHHHHHHHTTSC--GGGEETTCCEEEEEECTT-SC-EEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCST
T ss_pred hhhhC--HHHHHHHHHHhCC--CCEEEECCEEEEEEEcCC-Ce-EEEEECCCcEEECCEEEECCCHHHhhhccccccccc
Confidence 35565 4678898887764 368999999999998642 33 467776 568999999999999998643
Q ss_pred --hh-hhcccCchhHHhhccCcccceEEEEEEeccCCCCCCCcceeecCCCCcc--ceEeecc-----------------
Q 019274 124 --IK-NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLA--WTFFDLN----------------- 181 (343)
Q Consensus 124 --l~-~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~----------------- 181 (343)
+. .+.+ +....+.++++.+.++.++++.|++++|..... .+.+...... ...++.+
T Consensus 270 ~~i~f~P~L-p~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (516)
T 1rsg_A 270 GRIEFQPPL-KPVIQDAFDKIHFGALGKVIFEFEECCWSNESS-KIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQK 347 (516)
T ss_dssp TCCEEESCC-CHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCS-EEEECCCCCHHHHHHHHHCCSHHHHHHHC-------
T ss_pred cceEecCCC-CHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCC-cEEEeCCCCccchhhcccCcccchhhhccccccccc
Confidence 11 1123 234567888999999999999999999854322 2221111000 0000000
Q ss_pred ----c--cccc-----cCCCCCeEEEEEeeCC---CCCCCC--CHHHHHHH---HHHHHhhhcc------cCCCC-----
Q 019274 182 ----K--IYDE-----HKDDSATVIQADFYHA---NELMPL--KDDQVVAK---AVSYLSKCIK------DFSTA----- 231 (343)
Q Consensus 182 ----~--~~~~-----~~~~~~~~i~~~~~~~---~~~~~~--~~~e~~~~---~~~~L~~~~p------~~~~~----- 231 (343)
. ..+. +...+..++.. +..+ ..+..+ +++++.+. +++.+.++|+ ++...
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~ 426 (516)
T 1rsg_A 348 HTSVTCWSQPLFFVNLSKSTGVASFMM-LMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIAN 426 (516)
T ss_dssp --CCCTTSSCEEEEEHHHHTSCSEEEE-EECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------
T ss_pred ccccccccCceeEEEeeecCCCcEEEE-EecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccc
Confidence 0 0000 00012334332 3222 123344 67777654 5555555553 33210
Q ss_pred --cee--eeEEEecCCCc------cccCCCCCCC--CCCC-CCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 232 --TVM--DHKIRRFPKSL------THFFPGSYKY--MMRG-FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 232 --~~~--~~~~~r~~~~~------~~~~~g~~~~--~p~~-~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
.++ ...+++|...- ..+.||.... .... ..+.++|||||++|...++ ++|+||+.||.+||++|++
T Consensus 427 a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~-g~v~GA~~SG~raA~~i~~ 505 (516)
T 1rsg_A 427 ANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGA-GCAYGAWESGRREATRISD 505 (516)
T ss_dssp CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTB-TSHHHHHHHHHHHHHHHHH
T ss_pred cCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCC-ccchhHHHHHHHHHHHHHH
Confidence 122 45556774321 1223443210 0111 1356789999999987677 7999999999999999998
Q ss_pred HhCC
Q 019274 299 YLGD 302 (343)
Q Consensus 299 ~~~~ 302 (343)
.+..
T Consensus 506 ~~~~ 509 (516)
T 1rsg_A 506 LLKL 509 (516)
T ss_dssp HHHG
T ss_pred Hhhh
Confidence 7763
No 23
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.63 E-value=9.3e-16 Score=144.24 Aligned_cols=259 Identities=12% Similarity=0.137 Sum_probs=149.7
Q ss_pred HHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHH-HHhcCCCceeEeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEE
Q 019274 9 RLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-ILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDF 87 (343)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~-~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I 87 (343)
++.+.++.|++...++ +++++|+.+++.++... ++....+. ...+.||+ +.++++|.+.+ +.+|++|++|++|
T Consensus 156 ~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~-~~l~~~l~~~l---~~~v~~~~~V~~i 229 (424)
T 2b9w_A 156 AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGD-LWTWADGT-QAMFEHLNATL---EHPAERNVDITRI 229 (424)
T ss_dssp GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTC-CBCCTTCH-HHHHHHHHHHS---SSCCBCSCCEEEE
T ss_pred HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCc-eEEeCChH-HHHHHHHHHhh---cceEEcCCEEEEE
Confidence 4666677788776664 67889988775443321 11100111 12457884 67999988766 5689999999999
Q ss_pred EecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCCCCCCCcceee
Q 019274 88 IYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACS 167 (343)
Q Consensus 88 ~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~ 167 (343)
..++ +++. |++++++++||+||+|+|++.+.++++.. +...+.+.++.+.++. +.+.+....+ . ...++
T Consensus 230 ~~~~--~~v~-v~~~~g~~~ad~Vv~a~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~--~-~~~~~ 298 (424)
T 2b9w_A 230 TRED--GKVH-IHTTDWDRESDVLVLTVPLEKFLDYSDAD----DDEREYFSKIIHQQYM-VDACLVKEYP--T-ISGYV 298 (424)
T ss_dssp ECCT--TCEE-EEESSCEEEESEEEECSCHHHHTTSBCCC----HHHHHHHTTCEEEEEE-EEEEEESSCC--S-SEEEC
T ss_pred EEEC--CEEE-EEECCCeEEcCEEEECCCHHHHhhccCCC----HHHHHHHhcCCcceeE-EEEEEeccCC--c-ccccc
Confidence 9877 5554 77775568999999999999887665431 2233344566665533 2223333322 1 11222
Q ss_pred cCC--C-CccceEeeccccccccCCCCCeEEEEE-eeCCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCC
Q 019274 168 GFG--D-SLAWTFFDLNKIYDEHKDDSATVIQAD-FYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPK 243 (343)
Q Consensus 168 ~~~--~-~~~~~~~d~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~ 243 (343)
+.. . ..++.+++.... ++.+..++.+. ......+...+++++.+.++++|.++.+... +++.. ..|..
T Consensus 299 ~~~~~~~~~g~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~~~--~~~~~--~~w~~ 370 (424)
T 2b9w_A 299 PDNMRPERLGHVMVYYHRW----ADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHPVE--KIIEE--QTWYY 370 (424)
T ss_dssp GGGGSGGGTTSCCEEEECC----TTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCCEE--EEEEE--EEEEE
T ss_pred cCCCCCcCCCcceEEeeec----CCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCccc--ccccc--cceee
Confidence 211 0 112223332222 11122333222 2223345567789999999999999654332 22221 22321
Q ss_pred ----CccccCCCCCCCCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHH
Q 019274 244 ----SLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 297 (343)
Q Consensus 244 ----~~~~~~~g~~~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il 297 (343)
+...+..|+.. +.....+.+||||||+|+. + +.+|+|+.||..||+.|+
T Consensus 371 ~p~~~~~~~~~G~~~-~~~~~~~~~~l~~aG~~~~--~--g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 371 FPHVSSEDYKAGWYE-KVEGMQGRRNTFYAGEIMS--F--GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EEECCHHHHHTTHHH-HHHHTTTGGGEEECSGGGS--C--SSHHHHHHHHHHHHHHHT
T ss_pred eeccCHHHHhccHHH-HHHHHhCCCCceEeccccc--c--ccHHHHHHHHHHHHHHhc
Confidence 11223333221 1111235689999999974 3 478999999999999885
No 24
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.61 E-value=6e-15 Score=145.22 Aligned_cols=270 Identities=11% Similarity=0.036 Sum_probs=159.9
Q ss_pred ccccHHHHHHHHHHHHHhcCCCceeEeecCCCchhhhHHHHHHHHHcCCeEEcceeee--EEEecCCCC------eEEEE
Q 019274 28 EQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVT--DFIYDEERC------CISDV 99 (343)
Q Consensus 28 ~~~sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~--~I~~~~~~g------~v~~V 99 (343)
...|...++... . .. ...+...+.|| ++.|+++|++.+.. |+.|+++++|+ +|..+++ + .| .|
T Consensus 320 ~~~S~le~L~~~---~-~~-~~~~~~~i~GG-~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~-g~~~~~~~V-~V 390 (721)
T 3ayj_A 320 YNISLVEMMRLI---L-WD-YSNEYTLPVTE-NVEFIRNLFLKAQN-VGAGKLVVQVRQERVANACH-SGTASARAQ-LL 390 (721)
T ss_dssp TTBBHHHHHHHH---H-TT-TTCEECCSSSS-THHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEE-CSSSSCCEE-EE
T ss_pred cchhHHHHHHHH---h-cC-CccceeEECCc-HHHHHHHHHHhccc-CCceEeCCEEEeeeEEECCC-CCccccceE-EE
Confidence 456665544443 1 21 23345567899 57899999998753 67899999999 9998753 3 23 35
Q ss_pred -EEC-Ce--EEecCEEEEeeChhhHHHhh-----h----------------------hhc-ccC-------chhHHhhcc
Q 019274 100 -VCG-KE--TYSAGAVVLAVGISTLQELI-----K----------------------NSI-LCN-------REEFLKVLN 140 (343)
Q Consensus 100 -~~~-g~--~~~ad~VV~a~p~~~~~~Ll-----~----------------------~~~-~~~-------~~~~~~~~~ 140 (343)
.+. |+ +++||+||+|+|+..+..++ . .+. +-+ ....+++++
T Consensus 391 ~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~ 470 (721)
T 3ayj_A 391 SYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQ 470 (721)
T ss_dssp EEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHT
T ss_pred EEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHh
Confidence 333 55 78999999999999985411 1 111 101 234577889
Q ss_pred CcccceEEEEEEe-----ccCCCCCCCccee--ec-CCCCccce-EeeccccccccCCCCCeEEEEEeeC---CCCC---
Q 019274 141 LASIDVVSVKLWF-----DKKVTVPNVSNAC--SG-FGDSLAWT-FFDLNKIYDEHKDDSATVIQADFYH---ANEL--- 205 (343)
Q Consensus 141 l~~~~~~~v~l~~-----~~~~~~~~~~~~~--~~-~~~~~~~~-~~d~~~~~~~~~~~~~~~i~~~~~~---~~~~--- 205 (343)
+.+.+..++.+.+ ++++|... .+.. .. .+...... ++...+. ..+..++..++.+.|.. +..+
T Consensus 471 l~~~~s~Kv~l~~~~~~~~~~fW~~~-~g~~i~~s~TD~~~r~~~~~p~p~~-~d~~~~~~gvlL~sYtwg~dA~~~~~~ 548 (721)
T 3ayj_A 471 LHMARSSKVFATVKTAALDQPWVPQW-RGEPIKAVVSDSGLAASYVVPSPIV-EDGQAPEYSSLLASYTWEDDSTRLRHD 548 (721)
T ss_dssp CCEECEEEEEEEEEGGGGGSTTSCEE-TTEECCEEEETTTTEEEEEEECSCC-----CCSEEEEEEEEEETHHHHHHHTT
T ss_pred cCcccceEEEEEEccccCCCCccccc-CCCCceeeecCCCcceEEEeccCcc-cccCCCCCcEEEEEEeCccchhhhhcc
Confidence 9999999999999 88887432 1111 11 11111111 1110000 01111233444333321 1123
Q ss_pred ---CCCCHH-------HHHHHHHHHHh--hhcccCC-----------C-CceeeeEEEecCC--Cc---cccCCCCC---
Q 019274 206 ---MPLKDD-------QVVAKAVSYLS--KCIKDFS-----------T-ATVMDHKIRRFPK--SL---THFFPGSY--- 253 (343)
Q Consensus 206 ---~~~~~~-------e~~~~~~~~L~--~~~p~~~-----------~-~~~~~~~~~r~~~--~~---~~~~~g~~--- 253 (343)
..++++ ++.+.++++|. +++|+.. . ....+.....|.. +. ..+.||..
T Consensus 549 ~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~ 628 (721)
T 3ayj_A 549 FGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQS 628 (721)
T ss_dssp CCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHH
T ss_pred ccccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhh
Confidence 223333 44999999999 8898754 1 0112334566732 22 12345541
Q ss_pred ----CCC--CCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCCCCcccccc
Q 019274 254 ----KYM--MRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIP 310 (343)
Q Consensus 254 ----~~~--p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~~~~~~~~~ 310 (343)
.+. .....+..++||||+++. .++ +.+|||+.||.+||..|...++.+...|+.+
T Consensus 629 ~l~~~~~~~~~~~~~~gri~fAGe~~S-~~~-GWieGAl~Sa~~Aa~~i~~~~~~~~~~~~~~ 689 (721)
T 3ayj_A 629 NLCFRYHTHALAASLDNRFFIASDSYS-HLG-GWLEGAFMSALNAVAGLIVRANRGDVSALST 689 (721)
T ss_dssp HHHHHGGGGGGCTTTCCCEEECSGGGS-SCT-TSHHHHHHHHHHHHHHHHHHHTTTCGGGBCT
T ss_pred hhhhhhhhhccccCCCCCEEEeehhhc-cCC-ceehHHHHHHHHHHHHHHHHhcCCCCcccCc
Confidence 111 111234578999999997 566 6899999999999999999999877666554
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.59 E-value=6.2e-14 Score=127.39 Aligned_cols=218 Identities=15% Similarity=0.134 Sum_probs=143.5
Q ss_pred CCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEE-ecCEEEEeeChhhHHHhhhhhcccCchh
Q 019274 57 GTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETY-SAGAVVLAVGISTLQELIKNSILCNREE 134 (343)
Q Consensus 57 gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~-~ad~VV~a~p~~~~~~Ll~~~~~~~~~~ 134 (343)
+|+ +.+.++|.+ |++|+++++|++|..++ +. +.|+++ |..+ +||.||+|+|+.++.++++.. +..
T Consensus 107 ~~~-~~l~~~l~~-----g~~i~~~~~v~~i~~~~--~~-~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~----~~l 173 (336)
T 1yvv_A 107 PGM-SAITRAMRG-----DMPVSFSCRITEVFRGE--EH-WNLLDAEGQNHGPFSHVIIATPAPQASTLLAAA----PKL 173 (336)
T ss_dssp SCT-HHHHHHHHT-----TCCEECSCCEEEEEECS--SC-EEEEETTSCEEEEESEEEECSCHHHHGGGGTTC----HHH
T ss_pred ccH-HHHHHHHHc-----cCcEEecCEEEEEEEeC--CE-EEEEeCCCcCccccCEEEEcCCHHHHHHhhccC----HHH
Confidence 453 345544433 88999999999999887 44 457776 5554 599999999999988877542 233
Q ss_pred HHhhccCcccceEEEEEEeccCCCCCCCcceeecCCCCccceEeeccccccccCCCCCeEEEEEee--CCCCCCCCCHHH
Q 019274 135 FLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQ 212 (343)
Q Consensus 135 ~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~e 212 (343)
...+..+.|.++.++++.++++.+.+ ...++..+....| +++.+.. +. .++.+..+.+... .+..+.++++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-l~~~~~~-p~-~~~~~~~~v~~~~~~~~~~~~~~~~~~ 248 (336)
T 1yvv_A 174 ASVVAGVKMDPTWAVALAFETPLQTP--MQGCFVQDSPLDW-LARNRSK-PE-RDDTLDTWILHATSQWSRQNLDASREQ 248 (336)
T ss_dssp HHHHTTCCEEEEEEEEEEESSCCSCC--CCEEEECSSSEEE-EEEGGGS-TT-CCCSSEEEEEEECHHHHHHTTTSCHHH
T ss_pred HHHHhhcCccceeEEEEEecCCCCCC--CCeEEeCCCceeE-EEecCcC-CC-CCCCCcEEEEEeCHHHHHHHHhCCHHH
Confidence 45567788889999999999886533 2222212223334 4554432 21 1111122222221 133456778999
Q ss_pred HHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHH
Q 019274 213 VVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEA 292 (343)
Q Consensus 213 ~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~a 292 (343)
+.+.+++.+.++++.... .+....+.||..+.+.+..+... .....++|+||||++++ +++++|+.||..+
T Consensus 249 ~~~~l~~~l~~~lg~~~~-~p~~~~~~rw~~a~~~~~~~~~~----~~~~~~rl~laGDa~~g----~gv~~a~~sg~~l 319 (336)
T 1yvv_A 249 VIEHLHGAFAELIDCTMP-APVFSLAHRWLYARPAGAHEWGA----LSDADLGIYVCGDWCLS----GRVEGAWLSGQEA 319 (336)
T ss_dssp HHHHHHHHHHTTCSSCCC-CCSEEEEEEEEEEEESSCCCCSC----EEETTTTEEECCGGGTT----SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCC-CCcEEEccccCccCCCCCCCCCe----eecCCCCEEEEecCCCC----CCHHHHHHHHHHH
Confidence 999999999999974321 34455678888776665544321 11245899999999863 4899999999999
Q ss_pred HHHHHHHhC
Q 019274 293 ANRVVDYLG 301 (343)
Q Consensus 293 A~~il~~~~ 301 (343)
|+.|.+.+.
T Consensus 320 A~~l~~~~~ 328 (336)
T 1yvv_A 320 ARRLLEHLQ 328 (336)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 999999865
No 26
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.26 E-value=6.6e-10 Score=105.26 Aligned_cols=66 Identities=11% Similarity=0.083 Sum_probs=59.3
Q ss_pred ceeEeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEec--CCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 50 FDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 50 ~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~--~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
..+.+|+||+ +.|+++|++.+++.|++|+++++|++|..+ + +++++|+++|++++||+||+|++++
T Consensus 232 ~~~~~p~gG~-~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~~~V~~~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 232 SPYLYPMYGL-GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--GKFEGVKTKLGTFKAPLVIADPTYF 299 (453)
T ss_dssp CSEEEETTCT-THHHHHHHHHHHHTTCEEECSCCCCEEEEETTT--TEEEEEEETTEEEECSCEEECGGGC
T ss_pred CceEeeCCCH-HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC--CeEEEEEECCeEEECCEEEECCCcc
Confidence 3466899996 579999999999999999999999999988 6 7888899888899999999999986
No 27
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.15 E-value=7.1e-09 Score=97.57 Aligned_cols=91 Identities=10% Similarity=0.042 Sum_probs=69.5
Q ss_pred CcccccHHHHHHHHHHHHH--hcCCCceeEeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECC
Q 019274 26 PAEQCSAAATLGILYFIIL--AHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK 103 (343)
Q Consensus 26 ~~~~~sa~~~~~~l~~~~~--~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g 103 (343)
++.+.++...+..+..+.. .......+.+|+||+ +.|+++|++.+++.|++|+++++|++|..++ +++++|+++|
T Consensus 198 ~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~--~~v~~v~~~g 274 (433)
T 1d5t_A 198 DYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGL-GELPQGFARLSAIYGGTYMLNKPVDDIIMEN--GKVVGVKSEG 274 (433)
T ss_dssp GGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCT-THHHHHHHHHHHHHTCCCBCSCCCCEEEEET--TEEEEEEETT
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCH-HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC--CEEEEEEECC
Confidence 4556666544443333321 111223467899995 6799999999999999999999999999887 7888888888
Q ss_pred eEEecCEEEEeeChhh
Q 019274 104 ETYSAGAVVLAVGIST 119 (343)
Q Consensus 104 ~~~~ad~VV~a~p~~~ 119 (343)
++++||+||+|++++.
T Consensus 275 ~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 275 EVARCKQLICDPSYVP 290 (433)
T ss_dssp EEEECSEEEECGGGCG
T ss_pred eEEECCEEEECCCCCc
Confidence 8999999999999874
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.12 E-value=2.3e-11 Score=112.16 Aligned_cols=121 Identities=12% Similarity=0.026 Sum_probs=85.6
Q ss_pred CCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHHHhcCC-Ccee-EeecCCCchhhhHHHHHHHHHcCCeEEcce
Q 019274 5 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCRGTLREKIFEPWMDSMRTRGCEFLDGR 82 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~-~~~~-~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~ 82 (343)
+++++++++++.|++.++|+.+++++|+..+..+.......+.. ...+ ++|+|| ++.|+++|++ |++|++|+
T Consensus 138 ~~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~-----g~~i~l~~ 211 (367)
T 1i8t_A 138 LVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGG-YTKLIEKMLE-----GVDVKLGI 211 (367)
T ss_dssp HHHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTC-HHHHHHHHHT-----TSEEECSC
T ss_pred HHhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCC-HHHHHHHHhc-----CCEEEeCC
Confidence 37889999999999999999999999987542110000000100 1123 489999 4678888876 68999999
Q ss_pred eeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCC
Q 019274 83 RVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKV 157 (343)
Q Consensus 83 ~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~ 157 (343)
+|++|. . . + ...||+||+|+|++.+.++ .+.+++|.+...+.+.++++.
T Consensus 212 ~V~~i~--~--~-v--------~~~~D~VV~a~p~~~~~~~-------------~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 212 DFLKDK--D--S-L--------ASKAHRIIYTGPIDQYFDY-------------RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp CGGGSH--H--H-H--------HTTEEEEEECSCHHHHTTT-------------TTCCCCEEEEEEEEEEESSSC
T ss_pred ceeeec--h--h-h--------hccCCEEEEeccHHHHHHH-------------hhCCCCCceEEEEEEEecccc
Confidence 999884 2 2 2 2469999999999876532 134577888888888888764
No 29
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.10 E-value=5.9e-11 Score=110.01 Aligned_cols=116 Identities=7% Similarity=-0.060 Sum_probs=83.2
Q ss_pred CCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHHHhcC-CCcee-EeecCCCchhhhHHHHHHHHHcCCeEEcce
Q 019274 5 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQ-KNFDL-VWCRGTLREKIFEPWMDSMRTRGCEFLDGR 82 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~-~~~~~-~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~ 82 (343)
.++++++++++.|++.++|+.+++++|+..+..+...+...+. ....+ .+|+|| ++.|+++|++ +.|++|++|+
T Consensus 142 ~~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~~I~l~~ 217 (384)
T 2bi7_A 142 FIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCG-YTQMIKSILN---HENIKVDLQR 217 (384)
T ss_dssp HHCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTH-HHHHHHHHHC---STTEEEEESC
T ss_pred hhcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcC-HHHHHHHHHh---cCCCEEEECC
Confidence 3789999999999999999999999998764211000000110 01123 389999 5679998876 3588999999
Q ss_pred eee-EEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEec
Q 019274 83 RVT-DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFD 154 (343)
Q Consensus 83 ~V~-~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~ 154 (343)
+|+ +|.. +||+||+|+|++.+.+++ +.++.|.+...+.+.++
T Consensus 218 ~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~-------------lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 218 EFIVEERT-----------------HYDHVFYSGPLDAFYGYQ-------------YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp CCCGGGGG-----------------GSSEEEECSCHHHHTTTT-------------TCCCCEEEEEEEEEEEE
T ss_pred eeehhhhc-----------------cCCEEEEcCCHHHHHHhh-------------cCCCCcceEEEEEEEeC
Confidence 998 7631 299999999999876541 23467888777777777
No 30
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.08 E-value=4e-12 Score=118.55 Aligned_cols=123 Identities=8% Similarity=-0.111 Sum_probs=87.4
Q ss_pred CCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHHHhcCC-Ccee-EeecCCCchhhhHHHHHHHHHcCCeEEcce
Q 019274 5 GCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCRGTLREKIFEPWMDSMRTRGCEFLDGR 82 (343)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~-~~~~-~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~ 82 (343)
++++++++.++.|++.++|+.+++++|+.++..+...+...+.. ...+ .+|+|| ++.|+++|++ +.|++|++|+
T Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~---~~g~~I~l~~ 223 (399)
T 1v0j_A 148 LIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDG-YTAWLQNMAA---DHRIEVRLNT 223 (399)
T ss_dssp HHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTH-HHHHHHHHTC---STTEEEECSC
T ss_pred HHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhccccccc-HHHHHHHHHh---cCCeEEEECC
Confidence 57899999999999999999999999987652111000001110 1123 388999 4679998876 4588999999
Q ss_pred eeeEEEecCCCCeEEEEEECCeEE-ecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccC
Q 019274 83 RVTDFIYDEERCCISDVVCGKETY-SAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKK 156 (343)
Q Consensus 83 ~V~~I~~~~~~g~v~~V~~~g~~~-~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~ 156 (343)
+|++|.. . | . ++ +||+||+|+|++.+.++ .+.++.|.++..+.+.++.+
T Consensus 224 ~V~~I~~----~-v-----~--~~~~aD~VI~t~p~~~l~~~-------------~l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 224 DWFDVRG----Q-L-----R--PGSPAAPVVYTGPLDRYFDY-------------AEGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp CHHHHHH----H-H-----T--TTSTTCCEEECSCHHHHTTT-------------TTCCCCEEEEEEEEEEESSS
T ss_pred chhhhhh----h-h-----h--hcccCCEEEECCcHHHHHhh-------------hhCCCCcceEEEEEEEEccc
Confidence 9999852 2 2 1 34 69999999999987654 12456788777788888764
No 31
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.03 E-value=6.2e-10 Score=105.16 Aligned_cols=113 Identities=13% Similarity=0.092 Sum_probs=82.9
Q ss_pred ccCCCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHH--HhcCCCceeEeecCCCchhhhHHHHHHHHHcCCeEE
Q 019274 2 IQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFL 79 (343)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~--~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~ 79 (343)
+++++++++.+.++.+++... ..+..+.++...+..+..+. +...+.+.+.||+||+ ..|+++|++.+++.|++|+
T Consensus 197 ~~~gls~~l~~fl~~alaL~~-~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~-~~L~~aL~r~~~~~Gg~i~ 274 (475)
T 3p1w_A 197 KHFNLCQLTIDFLGHAVALYL-NDDYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGL-GGIPEGFSRMCAINGGTFM 274 (475)
T ss_dssp HHTTCCHHHHHHHHHHTSCCS-SSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCT-THHHHHHHHHHHHC--CEE
T ss_pred HHcCCCHHHHHHHHHHHHhhc-CCCcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCH-HHHHHHHHHHHHHcCCEEE
Confidence 567888888876555543322 12344567777766555443 2223456788999996 5699999999999999999
Q ss_pred cceeeeEEEe-cCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 80 DGRRVTDFIY-DEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 80 ~~~~V~~I~~-~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
++++|++|.. ++ |++++|++. |++++||+||+|++..
T Consensus 275 l~t~V~~I~~d~~--g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 275 LNKNVVDFVFDDD--NKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp SSCCEEEEEECTT--SCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred eCCeEEEEEEecC--CeEEEEEECCCcEEECCEEEECCCcc
Confidence 9999999998 55 788999997 5789999999999764
No 32
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.80 E-value=1.5e-09 Score=89.50 Aligned_cols=97 Identities=12% Similarity=0.116 Sum_probs=70.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhc-ccCCCCceeee--EEEecCCCcc------ccCCCCCC-CCCCCCCCCCCeEEeec
Q 019274 202 ANELMPLKDDQVVAKAVSYLSKCI-KDFSTATVMDH--KIRRFPKSLT------HFFPGSYK-YMMRGFTSFPNLFMAGD 271 (343)
Q Consensus 202 ~~~~~~~~~~e~~~~~~~~L~~~~-p~~~~~~~~~~--~~~r~~~~~~------~~~~g~~~-~~p~~~~~~~~L~laGd 271 (343)
+..+..++++++++.++++|.++| |+. . .+... .+++|...-+ .+.||... +.+....+.++|||||+
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~-~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe 125 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRI-E-VFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGE 125 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGG-G-GTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCc-H-hhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEH
Confidence 344667788999999999999999 665 3 44445 6677854322 12344321 12233356789999999
Q ss_pred cccCCCCCccchHHHHHHHHHHHHHHHHhCC
Q 019274 272 WITTRHGSWSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 272 ~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
++.. ++ ++|+||+.||++||++|+..++.
T Consensus 126 ~ts~-~~-g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 126 HVSL-KH-AWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp GGTT-ST-TSHHHHHHHHHHHHHHHHTCCC-
T ss_pred HHcC-Cc-cCHHHHHHHHHHHHHHHHHHhcc
Confidence 9985 77 69999999999999999998764
No 33
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.66 E-value=2.1e-07 Score=90.65 Aligned_cols=138 Identities=9% Similarity=0.007 Sum_probs=87.7
Q ss_pred CccCCCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHH--HhcCCCceeEeecCCCchhhhHHHHHHHHHcCCeE
Q 019274 1 MIQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEF 78 (343)
Q Consensus 1 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~--~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i 78 (343)
|++.++++++.+.+...+ ++... +..++...+..+..++ ++..+...+.||+||+ ..|+++|.+.++..||+|
T Consensus 321 L~~~~ls~~L~~~L~~~l--al~~~--~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~-g~L~qaL~r~~~~~Gg~i 395 (650)
T 1vg0_A 321 LKTQKLTPNLQYFVLHSI--AMTSE--TTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQ-GELPQCFCRMCAVFGGIY 395 (650)
T ss_dssp HTTSSSCHHHHHHHHHHT--TC--C--CSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCT-THHHHHHHHHHHHTTCEE
T ss_pred HHHhCCCHHHHHHHHHHH--hccCC--CCCchhHHHHHHHHHHHHHHhhccCceEEeCCch-hHHHHHHHHHHHHcCCEE
Confidence 356667777666554322 23222 2235555443333332 1222334678999996 569999999999999999
Q ss_pred EcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCC
Q 019274 79 LDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKV 157 (343)
Q Consensus 79 ~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~ 157 (343)
+++++|++|..++++|++++|++. |++++||+||++.. . ++... ..++.+..+..+.+.+++++
T Consensus 396 ~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~--~----lp~~~---------~~~~~~~~v~R~i~i~~~pi 460 (650)
T 1vg0_A 396 CLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS--Y----LSENT---------CSRVQYRQISRAVLITDGSV 460 (650)
T ss_dssp ESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG--G----BCTTT---------TTTCCCEEEEEEEEEESSCS
T ss_pred EeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh--h----cCHhH---------hccccccceEEEEEEecCCC
Confidence 999999999987633578888865 78999999999332 1 11110 11223445666777788765
Q ss_pred C
Q 019274 158 T 158 (343)
Q Consensus 158 ~ 158 (343)
.
T Consensus 461 ~ 461 (650)
T 1vg0_A 461 L 461 (650)
T ss_dssp S
T ss_pred C
Confidence 4
No 34
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.55 E-value=5.7e-08 Score=89.90 Aligned_cols=122 Identities=6% Similarity=-0.035 Sum_probs=85.5
Q ss_pred CCCCHHHHHHhHHHHHHhhhcCCcccccHHHHHHHHHHHHHhcCC--Ccee-EeecCCCchhhhHHHHHHHHHcCCeEEc
Q 019274 4 FGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK--NFDL-VWCRGTLREKIFEPWMDSMRTRGCEFLD 80 (343)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~--~~~~-~~~~gG~~~~l~~~l~~~l~~~G~~i~~ 80 (343)
+++|++++++|++|++.++|+.+++++|+.++.. +......... ...+ ++|+||. ..|+++|++ +.|++|++
T Consensus 165 ~~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~R-vp~~~~~d~~yf~~~~qg~P~gGy-~~l~e~l~~---~~g~~V~l 239 (397)
T 3hdq_A 165 SKVGRDLYNKFFRGYTRKQWGLDPSELDASVTAR-VPTRTNRDNRYFADTYQAMPLHGY-TRMFQNMLS---SPNIKVML 239 (397)
T ss_dssp HHHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGG-SCCCSSCCCBSCCCSEEEEETTCH-HHHHHHHTC---STTEEEEE
T ss_pred HhcCHHHHHHHHHHHhCchhCCCHHHHHHHHHHh-cCcccccCccchhhhheeccCCCH-HHHHHHHHh---ccCCEEEE
Confidence 4678999999999999999999999999875421 1100000000 1123 4799994 678888754 56999999
Q ss_pred ceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCCC
Q 019274 81 GRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVT 158 (343)
Q Consensus 81 ~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~ 158 (343)
|++|+++ + . ++.+|+||+|+|++.+... ...+|.|.+...+.+.++....
T Consensus 240 ~~~v~~~---~--~----------~~~~d~vI~T~P~d~~~~~-------------~~g~L~yrsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 240 NTDYREI---A--D----------FIPFQHMIYTGPVDAFFDF-------------CYGKLPYRSLEFRHETHDTEQL 289 (397)
T ss_dssp SCCGGGT---T--T----------TSCEEEEEECSCHHHHTTT-------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred CCeEEec---c--c----------cccCCEEEEcCCHHHHHHH-------------hcCCCCCceEEEEEEEeccccC
Confidence 9999843 1 1 3358999999998766311 1346788888888888886543
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.52 E-value=3.4e-06 Score=79.13 Aligned_cols=58 Identities=19% Similarity=0.324 Sum_probs=51.6
Q ss_pred hhhhHHHHHHHHHcCCeEEcce---eeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGR---RVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~---~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
..++++|.+.+++.|++|++++ +|++|..++ +++++|++. |++++||.||+|+++++.
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCChh
Confidence 4588999999999999999999 999999887 788889987 558999999999999864
No 36
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.46 E-value=2.5e-05 Score=71.63 Aligned_cols=206 Identities=10% Similarity=0.070 Sum_probs=111.3
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhcc
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 140 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~ 140 (343)
..++++|.+.+++.|++|+.+++|++|..++ +++.+|++.+++++||.||+|++.+... |.+..... ..
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~g~i~a~~VV~A~G~~s~~-l~~~~g~~--------~~ 217 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNKGIIKTGIVVNATNAWANL-INAMAGIK--------TK 217 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTEEEECSEEEECCGGGHHH-HHHHHTCC--------SC
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECCcEEECCEEEECcchhHHH-HHHHcCCC--------cC
Confidence 4578889999999999999999999999887 6777788876689999999999998532 32211000 00
Q ss_pred CcccceEEEEEEeccCCCCCCCcceeecCCCCccceEeeccccccccCCCCCeEEEEE-eeCCCCCCCCCHHHHHHHHHH
Q 019274 141 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD-FYHANELMPLKDDQVVAKAVS 219 (343)
Q Consensus 141 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~e~~~~~~~ 219 (343)
+...+.-...+.++...... ....++..+. ...++- + . +++-++... ......+....+++..+.+++
T Consensus 218 ~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~--~~~y~~-----p-~--~~g~~iG~~~~~~~~~~~~~~~~~~~~~l~~ 286 (382)
T 1y56_B 218 IPIEPYKHQAVITQPIKRGT-INPMVISFKY--GHAYLT-----Q-T--FHGGIIGGIGYEIGPTYDLTPTYEFLREVSY 286 (382)
T ss_dssp CCCEEEEEEEEEECCCSTTS-SCSEEEESTT--TTEEEE-----C-C--SSSCCEEECSCCBSSCCCCCCCHHHHHHHHH
T ss_pred cCCCeeEeEEEEEccCCccc-CCCeEEecCC--CeEEEE-----E-e--CCeEEEecCCCCCCCCCCCCCCHHHHHHHHH
Confidence 11112212222233211100 0011211110 011111 1 0 123222211 111111222345677888999
Q ss_pred HHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 220 YLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 220 ~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.+.++||.+.+.+++.. |.. ....+++..... ......+|+|++..+. | .++.-|..+|+.+|+.|.+.
T Consensus 287 ~~~~~~p~l~~~~~~~~----~~g-~r~~t~d~~p~i-g~~~~~~~~~~~~G~~--g---~G~~~a~~~g~~la~~i~~~ 355 (382)
T 1y56_B 287 YFTKIIPALKNLLILRT----WAG-YYAKTPDSNPAI-GRIEELNDYYIAAGFS--G---HGFMMAPAVGEMVAELITKG 355 (382)
T ss_dssp HHHHHCGGGGGSEEEEE----EEE-EEEECTTSCCEE-EEESSSBTEEEEECCT--T---CHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhCCCcCCCCceEE----EEe-ccccCCCCCcEe-ccCCCCCCEEEEEecC--c---chHhhhHHHHHHHHHHHhCC
Confidence 99999998865344332 211 112233322110 0012367999886542 3 35667889999999999864
No 37
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.43 E-value=7.3e-06 Score=75.21 Aligned_cols=196 Identities=12% Similarity=0.034 Sum_probs=109.9
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhcc
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 140 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~ 140 (343)
..+.+.|.+.+++.|++|+++++|++|..++ +++ .|++++++++||.||+|++.+.. .+++.... .
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~s~-~l~~~~~~----------~ 229 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EAL-FIKTPSGDVWANHVVVASGVWSG-MFFKQLGL----------N 229 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSE-EEEETTEEEEEEEEEECCGGGTH-HHHHHTTC----------C
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEE-EEEcCCceEEcCEEEECCChhHH-HHHHhcCC----------C
Confidence 4588999999999999999999999999877 555 78787668999999999999754 23332110 0
Q ss_pred CcccceEEEEEEeccCCCCCCCcceeecCCCCccceEeeccccccccCCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHH
Q 019274 141 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSY 220 (343)
Q Consensus 141 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~ 220 (343)
+...+.-...+.++.+.... . ..++. ...+ ++ +. +++.++.........+....+++..+.+++.
T Consensus 230 ~~~~~~~g~~~~~~~~~~~~-~-~~~~~---~~~~-~~------p~---~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~ 294 (382)
T 1ryi_A 230 NAFLPVKGECLSVWNDDIPL-T-KTLYH---DHCY-IV------PR---KSGRLVVGATMKPGDWSETPDLGGLESVMKK 294 (382)
T ss_dssp CCCEEEEEEEEEEECCSSCC-C-SEEEE---TTEE-EE------EC---TTSEEEEECCCEETCCCCSCCHHHHHHHHHH
T ss_pred CceeccceEEEEECCCCCCc-c-ceEEc---CCEE-EE------Ec---CCCeEEEeecccccCCCCCCCHHHHHHHHHH
Confidence 11122222333343321100 1 11111 0011 11 10 1233321111111122333456778899999
Q ss_pred HhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCCC--CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 221 LSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF--TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 221 L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~~--~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
+.+++|.+.+.++... |.. ...++++.. |..- ...+|+|+++.+. |+ ++..|..+|+.+|+.|++
T Consensus 295 ~~~~~p~l~~~~~~~~----w~g-~~~~t~d~~---p~ig~~~~~~~l~~~~G~~--g~---G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 295 AKTMLPAIQNMKVDRF----WAG-LRPGTKDGK---PYIGRHPEDSRILFAAGHF--RN---GILLAPATGALISDLIMN 361 (382)
T ss_dssp HHHHCGGGGGSEEEEE----EEE-EEEECSSSC---CEEEEETTEEEEEEEECCS--SC---TTTTHHHHHHHHHHHHTT
T ss_pred HHHhCCCcCCCceeeE----EEE-ecccCCCCC---cEeccCCCcCCEEEEEcCC--cc---hHHHhHHHHHHHHHHHhC
Confidence 9999998865333322 211 112233321 2111 1357999987663 33 345589999999999864
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.42 E-value=3.3e-05 Score=70.59 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=50.2
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~ 120 (343)
..++++|.+.+++.|++|+++++|++|..++ ++ +.|++++++++||+||+|++++..
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~-~~V~t~~g~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GA-WEVRCDAGSYRAAVLVNAAGAWCD 210 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEET--TE-EEEECSSEEEEESEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--Ce-EEEEeCCCEEEcCEEEECCChhHH
Confidence 4688999999999999999999999999887 55 678887668999999999999864
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.41 E-value=1.1e-05 Score=73.49 Aligned_cols=206 Identities=10% Similarity=-0.034 Sum_probs=107.5
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C--eEEecCEEEEeeChhhHHHhhhhh-cccCchhHH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K--ETYSAGAVVLAVGISTLQELIKNS-ILCNREEFL 136 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g--~~~~ad~VV~a~p~~~~~~Ll~~~-~~~~~~~~~ 136 (343)
..++++|.+.+++.|++|+++++|++|..+++ + ++.|.++ | .+++||.||+|++++.. +|++.. -++ ..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~-~~~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~~g~~-~~--- 222 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPE-G-GFELDFGGAEPMTLSCRVLINAAGLHAP-GLARRIEGIP-RD--- 222 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-S-SEEEEECTTSCEEEEEEEEEECCGGGHH-HHHHTEETSC-GG---
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-c-eEEEEECCCceeEEEeCEEEECCCcchH-HHHHHhcCCC-cc---
Confidence 45889999999999999999999999998863 3 3457776 4 38999999999999853 243321 110 00
Q ss_pred hhccCcccceEEEEEEeccCCCCCCCcceeecCCC--CccceEeeccccccccCCCCCeE-EEEEeeCCCCCCCCCHHHH
Q 019274 137 KVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD--SLAWTFFDLNKIYDEHKDDSATV-IQADFYHANELMPLKDDQV 213 (343)
Q Consensus 137 ~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~e~ 213 (343)
......+.-..++.++.+... . ..++.... ..... +.. + .++.+ +.........+....+++.
T Consensus 223 --~~~~i~p~rG~~~~~~~~~~~--~-~~~~~~p~~~~~~~~-~~~----~----~~g~~~iG~t~e~~~~~~~~~~~~~ 288 (369)
T 3dme_A 223 --SIPPEYLCKGSYFTLAGRAPF--S-RLIYPVPQHAGLGVH-LTL----D----LGGQAKFGPDTEWIATEDYTLDPRR 288 (369)
T ss_dssp --GSCCCEEEEEEEEECSSSCSC--S-SEEEECTTCSSCCCC-EEE----C----TTSCEEECCCCEEESSCCCCCCGGG
T ss_pred --ccceeeecceEEEEECCCCcc--C-ceeecCCCCCCceEE-EeC----c----cCCcEEECCCcccccccccccCHHH
Confidence 001112222334445543211 1 11221110 00010 100 0 12222 2111111011222234556
Q ss_pred HHHHHHHHhhhcccCCCCceeeeEEEecCCCcccc-CCCCCCCCCCC----CCCCCCeEEeeccccCCCCCccchHHHHH
Q 019274 214 VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHF-FPGSYKYMMRG----FTSFPNLFMAGDWITTRHGSWSQERSYVT 288 (343)
Q Consensus 214 ~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~-~~g~~~~~p~~----~~~~~~L~laGd~~~~g~~~~~~ega~~S 288 (343)
.+.+++.+.+++|.+.+.+++..+. .-.+.. .++.....|.. ....+|+|++..+ +..++..+...
T Consensus 289 ~~~l~~~~~~~~P~l~~~~v~~~w~----G~Rp~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~-----~~~G~t~ap~~ 359 (369)
T 3dme_A 289 ADVFYAAVRSYWPALPDGALAPGYT----GIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGI-----ESPGLTASLAI 359 (369)
T ss_dssp GGGHHHHHHTTCTTCCTTCCEEEEE----EEEEESSCTTSCCCCCEEECHHHHCCTTEEEEECC-----CTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCChhhceecce----eccccccCCCCCcCCeEEecccccCCCCEEEEeCC-----CCchHhccHHH
Confidence 7788999999999987645544322 111110 01111122322 1246899988655 22355667788
Q ss_pred HHHHHHHH
Q 019274 289 GLEAANRV 296 (343)
Q Consensus 289 g~~aA~~i 296 (343)
|+.+|+.|
T Consensus 360 a~~~a~~i 367 (369)
T 3dme_A 360 AEETLARL 367 (369)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888766
No 40
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.38 E-value=2.4e-05 Score=72.25 Aligned_cols=199 Identities=15% Similarity=0.098 Sum_probs=109.0
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccC
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 141 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l 141 (343)
.+++.|.+.+++.|++|+++++|++|..++ +++++|++++++++||.||+|++.+.-. +...... .+
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~a~~vV~a~G~~s~~-l~~~~g~----------~~ 241 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTRGTIHAGKVALAGAGHSSV-LAEMAGF----------EL 241 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTCCEEEEEEEECCGGGHHH-HHHHHTC----------CC
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCCceEECCEEEECCchhHHH-HHHHcCC----------CC
Confidence 588899999999999999999999999877 6778888875589999999999987532 2221100 01
Q ss_pred cccceEEEEEEeccCCCCCCCcceeecCCCCccceEeeccccccccCCCCCeEE-EEEeeCCCCCCCCCHHHHHHHHHHH
Q 019274 142 ASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVI-QADFYHANELMPLKDDQVVAKAVSY 220 (343)
Q Consensus 142 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~e~~~~~~~~ 220 (343)
...+.....+.++ +.. +.....+...+ ...++. +. +++.++ ..............+++..+.+++.
T Consensus 242 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~---~~~y~~-----p~---~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~ 308 (405)
T 2gag_B 242 PIQSHPLQALVSE-LFE-PVHPTVVMSNH---IHVYVS-----QA---HKGELVMGAGIDSYNGYGQRGAFHVIQEQMAA 308 (405)
T ss_dssp CEEEEEEEEEEEE-EBC-SCCCSEEEETT---TTEEEE-----EC---TTSEEEEEEEECSSCCCSSCCCTHHHHHHHHH
T ss_pred CccccceeEEEec-CCc-cccCceEEeCC---CcEEEE-----Ec---CCCcEEEEeccCCCCccccCCCHHHHHHHHHH
Confidence 1111111112222 211 10011111111 011111 10 133333 2222111112222345677889999
Q ss_pred HhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCCC-CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 221 LSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF-TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 221 L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~~-~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
+.+++|.+.+.++...+. . ...++++.. |..- .+.+|+|++..+. |+ ++..|...|+.+|+.|.+.
T Consensus 309 ~~~~~p~l~~~~~~~~w~----g-~~~~t~d~~---p~ig~~~~~~l~~~~G~~--g~---G~~~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 309 AVELFPIFARAHVLRTWG----G-IVDTTMDAS---PIISKTPIQNLYVNCGWG--TG---GFKGTPGAGFTLAHTIAND 375 (405)
T ss_dssp HHHHCGGGGGCEECEEEE----E-EEEEETTSC---CEEEECSSBTEEEEECCG--GG---CSTTHHHHHHHHHHHHHHT
T ss_pred HHHhCCccccCCcceEEe----e-ccccCCCCC---CEecccCCCCEEEEecCC--Cc---hhhHHHHHHHHHHHHHhCC
Confidence 999999886434433221 1 112233322 2111 1267999886553 33 3445889999999999864
No 41
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.29 E-value=2.9e-05 Score=72.90 Aligned_cols=206 Identities=14% Similarity=0.057 Sum_probs=109.7
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEe---------------cCCCCeEEEEEECCeEE--ecCEEEEeeChhhHHHhh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIY---------------DEERCCISDVVCGKETY--SAGAVVLAVGISTLQELI 124 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~---------------~~~~g~v~~V~~~g~~~--~ad~VV~a~p~~~~~~Ll 124 (343)
.++++|.+.+++.|++|+.+++|++|.. ++ +++++|+++++++ +||.||+|++++.. +|+
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~-~l~ 258 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSDGTRVEVGEKLVVAAGVWSN-RLL 258 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETTSCEEEEEEEEEECCGGGHH-HHH
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCCCEEeecCCEEEECCCcCHH-HHH
Confidence 6889999999999999999999999988 44 6777888875578 99999999999853 344
Q ss_pred hhhcccCchhHHhhccCcccceEEEEEEeccCCCCCCCccee-ecCCCCc-cceEeeccc--cccccCCCC-CeEEEEEe
Q 019274 125 KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNAC-SGFGDSL-AWTFFDLNK--IYDEHKDDS-ATVIQADF 199 (343)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~-~~~~~~~-~~~~~d~~~--~~~~~~~~~-~~~i~~~~ 199 (343)
+.... .+...+.-..++.++.... ....... ..+.... ...+++... +.+. ++ +.++.-..
T Consensus 259 ~~~g~----------~~~~~p~rg~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~y~~p~---~~~g~~~iG~~ 324 (448)
T 3axb_A 259 NPLGI----------DTFSRPKKRMVFRVSASTE-GLRRIMREGDLAGAGAPPLIILPKRVLVRPA---PREGSFWVQLS 324 (448)
T ss_dssp GGGTC----------CCSEEEEEEEEEEEECCSH-HHHHHHHHCCTTSSSSCCEEEETTTEEEEEE---TTTTEEEEEEC
T ss_pred HHcCC----------CCcccccceEEEEeCCccc-ccccccccccccccCCCceEEcCCceEEeec---CCCCeEEEecC
Confidence 43111 0111222222333332210 0000000 0000000 001111100 0110 12 34432221
Q ss_pred eC---CCCCCC--CCHHHH-HHHHHHHHhhhcccCCCCceeeeEEEecCCCcccc-CCCCCCCCCCCC-CCCCCeEEeec
Q 019274 200 YH---ANELMP--LKDDQV-VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHF-FPGSYKYMMRGF-TSFPNLFMAGD 271 (343)
Q Consensus 200 ~~---~~~~~~--~~~~e~-~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~-~~g~~~~~p~~~-~~~~~L~laGd 271 (343)
.. ...+.. ..+++. .+.+++.+.++||.+.+.+++..+. .-. .. +++.. |... .+ +|||++..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~w~----G~r-~~~t~d~~---p~ig~~~-~~l~~a~G 395 (448)
T 3axb_A 325 DNLGRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWA----GHY-DISFDANP---VVFEPWE-SGIVVAAG 395 (448)
T ss_dssp CCTTSCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEEEE----EEE-EEETTSSC---EEECGGG-CSEEEEEC
T ss_pred CcccCCcccccccCCChHHHHHHHHHHHHHhCcCcccCCcccceE----EEe-ccccCCCC---cEeeecC-CCEEEEEC
Confidence 11 112222 234556 8899999999999987544443321 111 12 33322 2111 13 89998865
Q ss_pred cccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 272 WITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 272 ~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
+ .++ ++.-+...|+.+|+.|+.
T Consensus 396 ~--~g~---G~~~ap~~g~~la~~i~~ 417 (448)
T 3axb_A 396 T--SGS---GIMKSDSIGRVAAAVALG 417 (448)
T ss_dssp C--TTC---CGGGHHHHHHHHHHHHTT
T ss_pred C--Cch---hHhHhHHHHHHHHHHHcC
Confidence 5 233 345588899999988865
No 42
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.11 E-value=0.00027 Score=64.73 Aligned_cols=204 Identities=10% Similarity=0.079 Sum_probs=108.6
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhcc
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 140 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~ 140 (343)
..+++.|.+.+++.|++|+.+++|++|..++ +. +.|++++++++||.||+|++.+.- ++++.... .
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~-~~v~~~~g~~~a~~vV~A~G~~~~-~l~~~~g~----------~ 215 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISP--DS-VKIETANGSYTADKLIVSMGAWNS-KLLSKLNL----------D 215 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SC-EEEEETTEEEEEEEEEECCGGGHH-HHGGGGTE----------E
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecC--Ce-EEEEeCCCEEEeCEEEEecCccHH-HHhhhhcc----------C
Confidence 4588999999999999999999999999876 44 457777778999999999999753 34433110 0
Q ss_pred CcccceEEEEEEeccCCC-CC--CCcceeecCCCCccceEeeccccccccCCCCC-eEE-EEEee----CCCCCCCCC--
Q 019274 141 LASIDVVSVKLWFDKKVT-VP--NVSNACSGFGDSLAWTFFDLNKIYDEHKDDSA-TVI-QADFY----HANELMPLK-- 209 (343)
Q Consensus 141 l~~~~~~~v~l~~~~~~~-~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~i-~~~~~----~~~~~~~~~-- 209 (343)
+...+.-...+.++.... .. .....++..+ .... +| ..|. +++ .++ ..+.. .........
T Consensus 216 ~pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~-~y----~~p~---~~g~~~~iG~~~~~~~~~~~~~~~~~~~ 286 (389)
T 2gf3_A 216 IPLQPYRQVVGFFESDESKYSNDIDFPGFMVEV-PNGI-YY----GFPS---FGGCGLKLGYHTFGQKIDPDTINREFGV 286 (389)
T ss_dssp CCCEEEEEEEEEECCCHHHHBGGGTCCEEEEEE-TTEE-EE----EECB---STTCCEEEEESSCCEECCTTTCCCCTTS
T ss_pred CceEEEEEEEEEEecCcccccccccCCEEEEeC-CCCc-EE----EcCC---CCCCcEEEEEcCCCCccCcccccCccCC
Confidence 111222222333332210 00 0000011000 0000 11 0110 122 332 22111 111111112
Q ss_pred HHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCCCCCCCCeEEeeccccCCCCCccchHHHHHH
Q 019274 210 DDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTG 289 (343)
Q Consensus 210 ~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg 289 (343)
.++..+.+++.+.++||.+.+ .++.. |. +....+|+..... ......+|+|++..+ .|+ ++.-|..+|
T Consensus 287 ~~~~~~~l~~~~~~~~P~l~~-~~~~~----w~-g~r~~t~D~~p~i-g~~~~~~~l~~a~G~--~g~---G~~~ap~~g 354 (389)
T 2gf3_A 287 YPEDESNLRAFLEEYMPGANG-ELKRG----AV-CMYTKTLDEHFII-DLHPEHSNVVIAAGF--SGH---GFKFSSGVG 354 (389)
T ss_dssp SHHHHHHHHHHHHHHCGGGCS-CEEEE----EE-EEEEECTTSCCEE-EEETTEEEEEEEECC--TTC---CGGGHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCC-CceEE----EE-EEeccCCCCCeEE-ccCCCCCCEEEEECC--ccc---cccccHHHH
Confidence 345568999999999999865 44332 31 1122334322111 001235799988655 233 455688999
Q ss_pred HHHHHHHHHH
Q 019274 290 LEAANRVVDY 299 (343)
Q Consensus 290 ~~aA~~il~~ 299 (343)
+.+|+.|++.
T Consensus 355 ~~la~~i~~~ 364 (389)
T 2gf3_A 355 EVLSQLALTG 364 (389)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHcCC
Confidence 9999999864
No 43
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.08 E-value=7.9e-05 Score=73.88 Aligned_cols=57 Identities=14% Similarity=0.195 Sum_probs=49.3
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
..++++|.+.+++.|++|+++++|++|..++ ++ +.|++. |++++||.||+|++.+..
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~-v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DC-WLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TE-EEEEETTSCEEEESEEEECCGGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--Ce-EEEEECCCCEEECCEEEECCCcchh
Confidence 4588999999999999999999999999887 65 478875 578999999999999743
No 44
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.07 E-value=0.00017 Score=71.69 Aligned_cols=56 Identities=13% Similarity=0.117 Sum_probs=48.5
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-Ce-EEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE-TYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~-~~~ad~VV~a~p~~~ 119 (343)
..++++|.+.+++.|++|+++++|++|..++ ++ +.|+++ |+ +++||.||+|++.+.
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~-v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRID--SQ-WQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECS--SS-EEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--Ce-EEEEeCCCcEEEECCEEEECCCcch
Confidence 4588999999999999999999999999987 55 467776 45 899999999999974
No 45
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.01 E-value=0.00076 Score=62.03 Aligned_cols=56 Identities=29% Similarity=0.392 Sum_probs=47.7
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~ 120 (343)
.++++|.+.+++.|++|+++++|++|..++ +.+ .|++++++++||.||+|++.+..
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v-~v~t~~g~i~a~~VV~A~G~~s~ 209 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDA--DGV-SVTTDRGTYRAGKVVLACGPYTN 209 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEESSCEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeE-EEEECCCEEEcCEEEEcCCcChH
Confidence 578899999999999999999999999876 554 47777668999999999998753
No 46
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.00 E-value=0.00042 Score=67.08 Aligned_cols=220 Identities=17% Similarity=0.062 Sum_probs=114.6
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC----C--eEEecCEEEEeeChhhHHHhhhhhcccCchh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGISTLQELIKNSILCNREE 134 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g--~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~ 134 (343)
..++.+|++.+++.|++|+.+++|++|..++ +++++|++. | .+++||.||.|+++++-. +...... .
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~-l~~~~g~--~-- 242 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDT-LREKDRS--K-- 242 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHH-HHHTTTC--C--
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECCEEEECCCcchHH-HHHhcCC--C--
Confidence 4588899999999999999999999999987 788888763 3 378999999999998632 3221110 0
Q ss_pred HHhhccCcccceEEEEEEeccCCCCCCCcceeecCCCCccceEeeccccccccCCCCCeEEEEEe--eCCCCCCCCCHHH
Q 019274 135 FLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADF--YHANELMPLKDDQ 212 (343)
Q Consensus 135 ~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~e 212 (343)
......+.-..++.++.+.. +.....++... ..+..+|- .|. .+..++..+. +..+.......++
T Consensus 243 ----~~~~v~p~kG~~lvl~~~~~-~~~~~~~~~~~-~dgr~v~~----iP~---~g~~~iGtT~~~~~~~~~~~~~t~~ 309 (561)
T 3da1_A 243 ----HGKYLKLSKGVHLVVDQSRF-PLRQAVYFDTE-SDGRMIFA----IPR---EGKTYIGTTDTFYDKDIASPRMTVE 309 (561)
T ss_dssp ----CSSEEEEEEEEEEEEEGGGS-CCSSEEEECCS-SSCCCEEE----EEE---TTEEEECCCCEEECSCTTCCCCCHH
T ss_pred ----CCceEEeccEEEEEECCccC-CCceEEEeccC-CCCcEEEE----Eec---CCCEEEcCCCCccCCCcCCCCCCHH
Confidence 00112233345666665432 11122222210 01111111 111 1222322221 1111122223456
Q ss_pred HHHHHHHHHhhhcccCC--CCceeeeEEEecCCCccccC-CCCC---CCCCC-CCCCCCCeE-EeeccccCCCCCccchH
Q 019274 213 VVAKAVSYLSKCIKDFS--TATVMDHKIRRFPKSLTHFF-PGSY---KYMMR-GFTSFPNLF-MAGDWITTRHGSWSQER 284 (343)
Q Consensus 213 ~~~~~~~~L~~~~p~~~--~~~~~~~~~~r~~~~~~~~~-~g~~---~~~p~-~~~~~~~L~-laGd~~~~g~~~~~~eg 284 (343)
-++.+++.+.++||++. ..+++..+. +--|... ++.. ..|.. .....+||. ++|.- +..
T Consensus 310 ~i~~ll~~~~~~~P~l~~~~~~v~~~~a----GlRPl~~~~~~~~~~~sR~~~i~~~~~gli~i~Ggk---------~Tt 376 (561)
T 3da1_A 310 DRDYILAAANYMFPSLRLTADDVESSWA----GLRPLIHEEGKKASEISRKDEIFFSDSGLISIAGGK---------LTG 376 (561)
T ss_dssp HHHHHHHHHHHHCTTCCCCTTTEEEEEE----EEEEEEEC-----------CCEEECSSCCEEECCCC---------STT
T ss_pred HHHHHHHHHHHhCCCCCCChhhEEEEeE----EeccccCCCCCCccccccceEEEecCCCeEEEeCCh---------hhh
Confidence 67889999999999875 334544332 1111110 0100 01111 111235543 22321 122
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccc--cccCC
Q 019274 285 SYVTGLEAANRVVDYLGDGSFSKI--IPVEE 313 (343)
Q Consensus 285 a~~Sg~~aA~~il~~~~~~~~~~~--~~~~~ 313 (343)
+-.-|+.+++.+.+.++....|+| .|+.+
T Consensus 377 ~r~mAe~~~d~~~~~~~~~~~~~t~~~~l~g 407 (561)
T 3da1_A 377 YRKMAERTVDAVAQGLNVNEPCTTAAIRLSG 407 (561)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCTTSCCCTT
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCcCCcccCC
Confidence 456788899999998887666754 44444
No 47
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.95 E-value=0.0013 Score=63.65 Aligned_cols=58 Identities=16% Similarity=0.176 Sum_probs=49.1
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g~--~~~ad~VV~a~p~~~~ 120 (343)
..++.++++.+++.|++|+.+++|++|..++ ++|++|++ .++ +++||.||.|+++++-
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 3577888888999999999999999999887 78888875 332 7899999999999854
No 48
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.82 E-value=0.0025 Score=58.24 Aligned_cols=57 Identities=12% Similarity=0.033 Sum_probs=48.2
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC----CeEEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g~~~~ad~VV~a~p~~~~ 120 (343)
.+.+.|.+.+++.|++|+.+++|++|..++ +++.+|++. +.+++||.||.|.+.+..
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~ 163 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEcCEEEECCCcchH
Confidence 467888888888999999999999999887 777777772 358899999999998763
No 49
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.73 E-value=0.0057 Score=57.33 Aligned_cols=57 Identities=23% Similarity=0.237 Sum_probs=47.7
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g~--~~~ad~VV~a~p~~~~ 120 (343)
.+.+.|.+.+++.|++|+++++|++|..++ ++|++|++ +|+ +++||.||.|.+....
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 477888888888999999999999999877 67766655 454 7899999999998764
No 50
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.68 E-value=0.0051 Score=55.97 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC--Ce--EEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KE--TYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--g~--~~~ad~VV~a~p~~~~ 120 (343)
.+-+.|.+.+++.|++++++++|+++..++ +++.++... ++ +++||.||-|-+..+.
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccccceEEEEeEEEeCCccccH
Confidence 356778888888999999999999999887 777666543 43 6899999999998764
No 51
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.65 E-value=0.01 Score=56.38 Aligned_cols=57 Identities=18% Similarity=0.131 Sum_probs=48.1
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g~--~~~ad~VV~a~p~~~~ 120 (343)
..++.+|.+.+++.|++|+.+++|++|..++ + +++|++ +|+ +++||.||.|++++.-
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARREN--G-LWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET--T-EEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--C-EEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 4588899999999999999999999999865 3 567776 354 7899999999999864
No 52
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.36 E-value=0.029 Score=54.37 Aligned_cols=58 Identities=12% Similarity=0.218 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-------C---------eEEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-------K---------ETYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-------g---------~~~~ad~VV~a~p~~~~ 120 (343)
.|.+.|.+.+++.|++|+.+++|++|..+++ |+|++|++. | .+++||.||.|.+....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 4778899999999999999999999998765 677778764 2 57899999999999764
No 53
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.35 E-value=0.0079 Score=55.49 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-Ce--EEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE--TYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~--~~~ad~VV~a~p~~~~ 120 (343)
.+.+.|.+.+++.|++|+.+++|++|..+++ +.++.|.+. |+ +++||.||.|.+....
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~ 167 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGT-DSVTTIEDINGNKREIEARFIIDASGYGRV 167 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEEEEEEETTSCEEEEEEEEEEECCGGGCH
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEEcCCCCEEEEEcCEEEECCCCchh
Confidence 4778888888888999999999999998763 433455555 55 6899999999998764
No 54
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.32 E-value=0.00062 Score=58.15 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCCCCCCCCeEEeeccccCCCCCccchHHHH
Q 019274 208 LKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYV 287 (343)
Q Consensus 208 ~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~ 287 (343)
....+..+.....+...+..... .+....+.+|..+.+..... .+...+..+|+|+|||++.+ .++++|+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~w~~a~~~~~~~----~~~~~~~~~~v~l~GDa~~g----~gv~~A~~ 314 (336)
T 3kkj_A 244 ASREQVIEHLHGAFAELIDCTMP-APVFSLAHRWLYARPAGAHE----WGALSDADLGIYVCGDWCLS----GRVEGAWL 314 (336)
T ss_dssp SCHHHHHHHHHHHHHTTCSSCCC-CCSEEEEEEEEEEEESSCCC----CSSEEETTTTEEECCGGGTT----SSHHHHHH
T ss_pred ccchhhhhhhhhhhhhhccCCcC-cchheeccceeecccccccC----ccceeeCCCCEEEEecccCC----cCHHHHHH
Confidence 34566666777777766644332 45555667775544322111 11122456899999999752 47899999
Q ss_pred HHHHHHHHHHHHhCC
Q 019274 288 TGLEAANRVVDYLGD 302 (343)
Q Consensus 288 Sg~~aA~~il~~~~~ 302 (343)
||+.||+.|++.|..
T Consensus 315 sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 315 SGQEAARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999999875
No 55
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.19 E-value=0.013 Score=56.06 Aligned_cols=62 Identities=21% Similarity=0.233 Sum_probs=47.6
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCC---eEEEEEEC-C---eEEecCEEEEeeChhhH-HHhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC---CISDVVCG-K---ETYSAGAVVLAVGISTL-QELI 124 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g---~v~~V~~~-g---~~~~ad~VV~a~p~~~~-~~Ll 124 (343)
..|.+.|.+.+++.|++|+++++|++|..+++ + .|+ |++. + .+++||.||.|.+..+. .+.+
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAGVT-ARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECG-GGCSEEE-EEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCC-CccccEE-EEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 35778888899999999999999999998772 2 443 4433 3 57899999999999763 3444
No 56
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.13 E-value=0.0003 Score=53.94 Aligned_cols=113 Identities=10% Similarity=0.021 Sum_probs=51.1
Q ss_pred eEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhccCcccceEEEEEEeccCCCCCCCcceeecCCCCccceEeecccc
Q 019274 104 ETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKI 183 (343)
Q Consensus 104 ~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 183 (343)
++++||+||+|+|+..+.++.-.+.++ ....++++++.+....++.+.|++++|.+.. .. ++.+ .
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP-~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~---~~----------gd~s-~ 68 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFS-YKKRRAVIETHYDQATKVLLEFSRRWWEFTE---AD----------WKRE-L 68 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEESSCGGGCCH---HH----------HHHH-H
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCC-HHHHHHHHhCCCcceeEEEEEECCCCCCCCC---cc----------cccc-C
Confidence 478999999999999988764444453 4556788999999999999999999984321 10 1111 0
Q ss_pred ccccCCCCCeEEEEE-ee-CCCCCCCCCHHHHHHHHHHHHhhhcccCCCCceee
Q 019274 184 YDEHKDDSATVIQAD-FY-HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMD 235 (343)
Q Consensus 184 ~~~~~~~~~~~i~~~-~~-~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~ 235 (343)
.+. ..+.++.+. +. .+..|..+++ +..+.++..|..++|+....+++.
T Consensus 69 ~~~---~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~~~~~~~ 118 (130)
T 2e1m_B 69 DAI---APGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVDESRIGE 118 (130)
T ss_dssp HHH---STTHHHHHHHHCCCSCCCC-----------------------------
T ss_pred CCC---CCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCcHHHHHH
Confidence 000 112211111 01 2334566654 677889999999999765324443
No 57
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.09 E-value=0.0053 Score=56.57 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=45.0
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH-HHhh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL-QELI 124 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~-~~Ll 124 (343)
.|.+.|.+.+++ ++|+++++|++|..++ +.+ .|++. |++++||.||.|.+.... .+.+
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v-~v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDA--DGV-TVWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecC--CcE-EEEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 366777777765 8999999999999887 554 46665 678999999999998764 4444
No 58
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.05 E-value=0.0014 Score=61.54 Aligned_cols=65 Identities=15% Similarity=0.264 Sum_probs=53.9
Q ss_pred EeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 53 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 53 ~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
.+|..+-...+.+.|.+.+++.|++|+++++|++|..++ +++++|++. |++++||.||+|++...
T Consensus 126 ~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 126 MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 355433246789999999999999999999999999876 777888887 45699999999999876
No 59
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.02 E-value=0.018 Score=54.84 Aligned_cols=57 Identities=16% Similarity=0.142 Sum_probs=47.8
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC---C--eEEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG---K--ETYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~---g--~~~~ad~VV~a~p~~~~ 120 (343)
.+.+.|.+.+++.|++|+.+++|++|..++ +++.+|++. | .+++||.||.|.+....
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 477888888888999999999999999877 777767653 4 37899999999999763
No 60
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.00 E-value=0.033 Score=50.87 Aligned_cols=57 Identities=9% Similarity=0.011 Sum_probs=45.1
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~g~--~~~ad~VV~a~p~~~~ 120 (343)
.+.+.|.+.+.+.|++|+++++|++|..+++ +. +.|++ +|+ +++||.||.|.+....
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~-~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQG-ER-PYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTS-SS-CEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecC-Cc-eEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 4677888888888999999999999987642 33 34554 565 6899999999999764
No 61
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.95 E-value=0.0051 Score=55.43 Aligned_cols=188 Identities=12% Similarity=0.040 Sum_probs=99.5
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHHhhhhhcccCchhHHhhcc
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 140 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~Ll~~~~~~~~~~~~~~~~ 140 (343)
..++++|.+.+++.|++|+. ++|++|...+ + ++||.||+|++++... |++.
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~--~-----------~~a~~VV~A~G~~s~~-l~~~-------------- 192 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA--R-----------EGADVIVNCTGVWAGA-LQRD-------------- 192 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH--H-----------TTCSEEEECCGGGGGG-TSCC--------------
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh--c-----------CCCCEEEECCCcChHh-hcCC--------------
Confidence 35889999999999999998 8998886432 1 4699999999998743 3322
Q ss_pred CcccceEEEEEEeccCCCCCCCcceeecCC---CCccceEeeccccccccCCCCCeEEEEEeeCCCCCCCCCHHHHHHHH
Q 019274 141 LASIDVVSVKLWFDKKVTVPNVSNACSGFG---DSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKA 217 (343)
Q Consensus 141 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~e~~~~~ 217 (343)
+...+.-..++.++.+ ... .. ++..+ ......++ .+. ++.-++...... ..+....+++..+.+
T Consensus 193 ~~l~p~rg~~~~~~~~-~~~--~~-~~~~~~~~~~~~~~y~-----~p~---~~~~~iGg~~~~-~~~~~~~~~~~~~~l 259 (351)
T 3g3e_A 193 PLLQPGRGQIMKVDAP-WMK--HF-ILTHDPERGIYNSPYI-----IPG---TQTVTLGGIFQL-GNWSELNNIQDHNTI 259 (351)
T ss_dssp TTCEEEEEEEEEEECT-TCC--SE-EEECCTTTCTTCSCEE-----EEC---SSCEEEECCCEE-TCCCCSCCHHHHHHH
T ss_pred CceeecCCcEEEEeCC-Ccc--eE-EEeccccCCCCceeEE-----EeC---CCcEEEeeeeec-CCCCCCCCHHHHHHH
Confidence 1111222233333432 111 11 11110 00001111 010 122222211111 122222356678899
Q ss_pred HHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCC-CCCC--CCCCCCeEEeeccccCCCCCccchHHHHHHHHHHH
Q 019274 218 VSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY-MMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAAN 294 (343)
Q Consensus 218 ~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~-~p~~--~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~ 294 (343)
++.+.++||.+.+.+++..+. .- ...+|+ ... .+.. ....+|+|++..+ .| .++.-+..+|+.+|+
T Consensus 260 ~~~~~~~~P~l~~~~i~~~w~----G~-r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~--~g---~G~~~ap~~g~~la~ 328 (351)
T 3g3e_A 260 WEGCCRLEPTLKNARIIGERT----GF-RPVRPQ-IRLEREQLRTGPSNTEVIHNYGH--GG---YGLTIHWGCALEAAK 328 (351)
T ss_dssp HHHHHHHCGGGGGCEEEEEEE----EE-EEECSS-CEEEEEEECCSSSCEEEEEEECC--TT---CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCccCCcEeeeeE----ee-CCCCCC-ccceeeeccCCCCCCeEEEEeCC--Cc---chHhhhHHHHHHHHH
Confidence 999999999986544443322 11 112222 110 0000 1125789988654 23 456678899999999
Q ss_pred HHHHHhC
Q 019274 295 RVVDYLG 301 (343)
Q Consensus 295 ~il~~~~ 301 (343)
.|.+.+.
T Consensus 329 li~~~~~ 335 (351)
T 3g3e_A 329 LFGRILE 335 (351)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987664
No 62
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.86 E-value=0.0054 Score=59.62 Aligned_cols=58 Identities=21% Similarity=0.123 Sum_probs=47.7
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC--C--eEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--K--ETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--g--~~~~ad~VV~a~p~~~~ 120 (343)
..+.+.|.+.+++.|++|+.+++|++|..++ +.+++|++. | .+++||.||.|.+....
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEESEEEECCGGGCH
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEcCEEEECCCCcch
Confidence 3477888888989999999999999999875 445677764 5 47899999999998764
No 63
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.86 E-value=0.0022 Score=65.02 Aligned_cols=57 Identities=14% Similarity=0.159 Sum_probs=51.3
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~ 120 (343)
.++++|.+.+++.|++|+++++|++|..++ +++++|++++++++||.||+|++++..
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~~G~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTADGVIPADIVVSCAGFWGA 208 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECCGGGHH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEECCcEEECCEEEECCccchH
Confidence 588999999999999999999999999877 677788888778999999999999863
No 64
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.76 E-value=0.0029 Score=60.86 Aligned_cols=57 Identities=28% Similarity=0.293 Sum_probs=50.5
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|+++ |++++||.||+|++...
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4588889999999999999999999999887 678889887 56899999999999876
No 65
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.67 E-value=0.0043 Score=57.43 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=50.0
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.++++|++|+++++|++|..++ +++.+|++. |++++||.||++++...
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 45678888999999999999999999998876 777788886 67899999999998744
No 66
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.67 E-value=0.0046 Score=57.05 Aligned_cols=58 Identities=22% Similarity=0.273 Sum_probs=50.2
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +++.+|++. |++++||.||++++...
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 45678889999999999999999999998876 778888886 67899999999998743
No 67
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.64 E-value=0.0033 Score=56.99 Aligned_cols=56 Identities=18% Similarity=0.285 Sum_probs=47.9
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~ 120 (343)
.++++|.+.+++.|++|+.+++|++|..++ ++ +.|++++++++||.||+|++++.-
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~-~~v~~~~g~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DG-VTIETADGEYQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS--SS-EEEEESSCEEEEEEEEECCGGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CE-EEEEECCCeEEcCEEEEcCCccHH
Confidence 588999999999999999999999999877 44 457777557999999999998753
No 68
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.55 E-value=0.0054 Score=56.93 Aligned_cols=63 Identities=17% Similarity=0.260 Sum_probs=52.3
Q ss_pred EeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 53 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 53 ~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
.++... ...+.+.|.+.+++.|++|+++++|++|..++ +. +.|.+.+++++||.||+|++...
T Consensus 125 ~~~~~~-~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~-~~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 125 LFCDHS-AKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SG-FRVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp EEESSC-HHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TE-EEEEETTEEEEESEEEECCCCSS
T ss_pred EeeCCC-HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CE-EEEEECCcEEEeeEEEECCCCcc
Confidence 345434 45799999999999999999999999999877 54 56888766899999999999875
No 69
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.54 E-value=0.0042 Score=59.27 Aligned_cols=57 Identities=21% Similarity=0.303 Sum_probs=49.1
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC--Ce--EEecC-EEEEeeChhh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KE--TYSAG-AVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--g~--~~~ad-~VV~a~p~~~ 119 (343)
.+++.|.+.+++.|++|+++++|++|..+++ |+|++|++. ++ +++|| .||+|++...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 6899999999999999999999999999843 888888774 43 58996 9999999875
No 70
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.50 E-value=0.0067 Score=58.72 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=49.0
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE---CCe--EEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~g~--~~~ad~VV~a~p~~~ 119 (343)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|++ +|+ +++||.||+|++...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK-GTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT-SCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC-CeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 46889999999999999999999999998754 67877765 354 689999999999864
No 71
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.37 E-value=0.0065 Score=58.75 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=49.0
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE---CCe--EEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~g~--~~~ad~VV~a~p~~~ 119 (343)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|++ +|+ +++||.||+|++...
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD-HSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTT-SBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC-CcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 45889999999999999999999999998764 67877766 354 689999999999866
No 72
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.29 E-value=0.2 Score=47.49 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-Ce---EEecCEEEEeeChhhH-HHhh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE---TYSAGAVVLAVGISTL-QELI 124 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~---~~~ad~VV~a~p~~~~-~~Ll 124 (343)
.+.+.|.+.+++.|++|+++++|++|..++ +.|+ |++. ++ +++||.||.|.+..+. .+.+
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEG--DHVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHc
Confidence 477788888888899999999999999877 4443 5553 32 7899999999999874 3454
No 73
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.29 E-value=0.053 Score=48.86 Aligned_cols=45 Identities=24% Similarity=0.252 Sum_probs=37.1
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~ 120 (343)
..++++|.+.+++.|++|+. ++|++|.. . . + +||.||.|++.+.-
T Consensus 142 ~~~~~~l~~~~~~~G~~i~~-~~v~~l~~----~--~-------~-~a~~VV~A~G~~s~ 186 (363)
T 1c0p_A 142 PKYCQYLARELQKLGATFER-RTVTSLEQ----A--F-------D-GADLVVNATGLGAK 186 (363)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCSBGGG----T--C-------S-SCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEcccHhh----c--C-------c-CCCEEEECCCcchh
Confidence 45889999999999999998 99998742 2 1 2 79999999999874
No 74
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.26 E-value=0.01 Score=57.37 Aligned_cols=58 Identities=22% Similarity=0.258 Sum_probs=47.5
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC---Ce--EEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~---g~--~~~ad~VV~a~p~~~ 119 (343)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|++. |+ ++.||.||+|++...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~-g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS-GKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCC-CeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 46889999999999999999999999987653 578777663 54 689999999999754
No 75
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.25 E-value=0.22 Score=47.10 Aligned_cols=60 Identities=17% Similarity=0.082 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-Ce---EEecCEEEEeeChhhH-HHhh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE---TYSAGAVVLAVGISTL-QELI 124 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~---~~~ad~VV~a~p~~~~-~~Ll 124 (343)
.+.+.|.+.+++.|++|+++++|++|..++ +.|+ |++. ++ +++||.||.|.+..+. .+.+
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHc
Confidence 467788888888899999999999999887 4554 5553 32 7899999999999875 3444
No 76
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.23 E-value=0.0084 Score=56.17 Aligned_cols=58 Identities=12% Similarity=0.200 Sum_probs=48.9
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +++..|.++|++++||.||+|++...
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTSCEEEESEEEECCCEEE
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCCCEEECCEEEECcCCCC
Confidence 45578889999999999999999999998655 66766777778899999999998643
No 77
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.05 E-value=0.082 Score=51.05 Aligned_cols=60 Identities=20% Similarity=0.141 Sum_probs=47.4
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE--C-C-eEEecCEEEEeeChhhH-HHhh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G-K-ETYSAGAVVLAVGISTL-QELI 124 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~-g-~~~~ad~VV~a~p~~~~-~~Ll 124 (343)
.+.+.|.+.+++.|++|+.+++|++|..++ +.| .|++ . | .+++||.||.|.+..+. .+.+
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v-~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDA--EAV-EVTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCS--SCE-EEEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CeE-EEEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 467788888888899999999999999877 444 3555 3 5 58999999999999774 3444
No 78
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.04 E-value=0.016 Score=53.40 Aligned_cols=62 Identities=15% Similarity=0.177 Sum_probs=50.9
Q ss_pred eecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEec----CCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 54 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD----EERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 54 ~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~----~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
||... ...+.+.|.+.+++.|++|+++++|++|..+ + ++ +.|++++++++||.||+|++...
T Consensus 103 ~p~~~-~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~--~~-~~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 103 FCDEG-AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK--VR-FVLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp EETTC-THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS--CC-EEEEETTEEEEESEEEECCCCSS
T ss_pred ccCCC-HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC--Ce-EEEEECCCEEECCEEEECCCCcc
Confidence 45433 4668999999999999999999999999976 4 44 46777766899999999998776
No 79
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.91 E-value=0.016 Score=49.00 Aligned_cols=55 Identities=15% Similarity=0.041 Sum_probs=45.9
Q ss_pred hhhHHHHHHHHHc-CCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 62 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
.+.+.|.+.+++. |++++ +++|++|..++ +++++|++. |++++||.||.|++...
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG--NRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 5778888889887 89998 67999999877 677788886 56899999999999843
No 80
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.90 E-value=0.0049 Score=56.89 Aligned_cols=56 Identities=16% Similarity=0.151 Sum_probs=43.4
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeee---------EEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVT---------DFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~---------~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.|.+.+++.|++|+.+++|+ +|..++ +++ +|++++++++||.||.|+++++
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v-~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQ-IVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeE-EEEECCcEEECCEEEECCCccH
Confidence 3488999999999999999999999 888766 555 6777666899999999999985
No 81
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.88 E-value=0.84 Score=44.57 Aligned_cols=64 Identities=25% Similarity=0.226 Sum_probs=46.8
Q ss_pred hhhHHHHHHHHHcCC--eEEcceeeeEEEecCC-CCeEEEEEE-------CC--eEEecCEEEEeeChhhH-HHhhh
Q 019274 62 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEE-RCCISDVVC-------GK--ETYSAGAVVLAVGISTL-QELIK 125 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~--~i~~~~~V~~I~~~~~-~g~v~~V~~-------~g--~~~~ad~VV~a~p~~~~-~~Ll~ 125 (343)
.+.+.|.+.+++.|+ +|+++++|++|..+++ ++..+.|++ +| .+++||.||.|.+..+. .+.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 477788889999987 9999999999998752 021123432 34 47899999999999874 34543
No 82
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.80 E-value=0.016 Score=54.21 Aligned_cols=56 Identities=11% Similarity=0.096 Sum_probs=47.6
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|.+++++++||.||+|++..
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v-~v~~~~g~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETA--NGI-VLETSEQEISCDSGIFALNLH 243 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECS--SCE-EEEESSCEEEESEEEECSCCB
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--CeE-EEEECCCEEEeCEEEECcCCC
Confidence 45678889999999999999999999998766 566 677775689999999999864
No 83
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.65 E-value=0.028 Score=52.30 Aligned_cols=57 Identities=19% Similarity=0.348 Sum_probs=47.5
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEe--cCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~--~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|.. ++ ++++.|++. |+++.+|.||++++..
T Consensus 190 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEETTSCEEECSEEEECCCEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 345778888899999999999999999987 44 667678875 6789999999999864
No 84
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.59 E-value=0.034 Score=52.25 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=47.5
Q ss_pred CchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE-CCeEEecCEEEEeeChhh
Q 019274 59 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 119 (343)
Q Consensus 59 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~-~g~~~~ad~VV~a~p~~~ 119 (343)
+...+.+.+.+.+++.|++|+++++|++|..++ +++. |++ +|++++||.||+|++...
T Consensus 200 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~-v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 200 TSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVA-RVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEE-EEEESSCEEECSEEEECSCEEE
T ss_pred cCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEE-EEEeCCCEEEcCEEEECCCCCc
Confidence 345678889999999999999999999998766 6654 554 467899999999998753
No 85
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.49 E-value=0.024 Score=53.92 Aligned_cols=62 Identities=13% Similarity=0.104 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHcC-CeEEcceeeeEEEecCCCCeEEEEEE---CC-----eEEecCEEEEeeChhhHHHhh
Q 019274 63 IFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 124 (343)
Q Consensus 63 l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~g~v~~V~~---~g-----~~~~ad~VV~a~p~~~~~~Ll 124 (343)
...++.+.++++| ++|++++.|++|..+++++++++|++ +| .+++|+.||+|+++....+||
T Consensus 223 ~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL 293 (504)
T 1n4w_A 223 LDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELL 293 (504)
T ss_dssp TTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHH
Confidence 3455556666676 89999999999999853147889987 34 257899999999998766543
No 86
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.49 E-value=0.026 Score=54.77 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=48.1
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE---C-Ce--EEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-KE--TYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~-g~--~~~ad~VV~a~p~~~ 119 (343)
..+++.|.+.+++.|++|+++++|++|..+++ |+|++|.+ . |+ ++.|+.||+|++...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 45888999999999999999999999998632 78888875 2 43 589999999999865
No 87
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.46 E-value=0.029 Score=55.22 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=48.3
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE---C-Ce--EEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-KE--TYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~-g~--~~~ad~VV~a~p~~~ 119 (343)
..|++.|.+.+++.|++|+.+++|++|..++ |+|.+|.+ . |+ .+.|+.||+|++...
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4588999999999999999999999999876 78888765 2 44 489999999999865
No 88
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.39 E-value=0.043 Score=52.39 Aligned_cols=59 Identities=20% Similarity=0.250 Sum_probs=47.0
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeE--EEEEEC-Ce-EEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCI--SDVVCG-KE-TYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v--~~V~~~-g~-~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..+++ +++ +.|+++ |+ +++||.||+|++...
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 345778899999999999999999999987653 554 346665 45 799999999998643
No 89
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.39 E-value=0.033 Score=49.06 Aligned_cols=55 Identities=15% Similarity=0.259 Sum_probs=44.0
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-----C--eEEecCEEEEeeCh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-----K--ETYSAGAVVLAVGI 117 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-----g--~~~~ad~VV~a~p~ 117 (343)
..+.+.+.+.+++.|++|+++++|++|..++ +++.+|++. | .++++|.||++++.
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECS--SSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCC--CceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 3466778888888999999999999998765 566666653 3 47899999999876
No 90
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.39 E-value=0.028 Score=45.20 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=45.3
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.+.+.+++.|++++++ +|++|..++ +. +.|+++++++++|.||+|++...
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~--~~-~~v~~~~g~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMG--GV-FEVETEEGVEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECS--SS-EEEECSSCEEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC--CE-EEEEECCCEEEECEEEECCCCCC
Confidence 457888899999999999999 999998876 33 45776644899999999999753
No 91
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.39 E-value=0.032 Score=53.61 Aligned_cols=57 Identities=18% Similarity=0.198 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHHc-CCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
.+.+.|.+.+++. |++|+++ +|++|..+++ |.+++|++. |++++||.||.|++....
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEECCEEEECCCCchh
Confidence 4888899999988 9999999 9999988654 666778886 567999999999998764
No 92
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.38 E-value=0.024 Score=55.31 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=48.9
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g~--~~~ad~VV~a~p~~~~ 120 (343)
..+++.|.+.+++.|++|+.+++|++|..++ |+|.+|.+ +|+ .+.|+.||+|++....
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 3688899999988999999999999999876 88888875 243 6899999999998653
No 93
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.24 E-value=0.041 Score=52.26 Aligned_cols=58 Identities=21% Similarity=0.168 Sum_probs=48.3
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
..+.+.|.+.+++.|++++.+ +|++|..+++ +.+++|++. |++++||.||.|.+....
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDER-GWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 357788888888899999999 9999988654 666778876 558999999999999764
No 94
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.18 E-value=0.035 Score=52.80 Aligned_cols=61 Identities=15% Similarity=0.142 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHcC-CeEEcceeeeEEEecCCCC-eEEEEEE---CC-----eEEecCEEEEeeChhhHHHhh
Q 019274 63 IFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERC-CISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 124 (343)
Q Consensus 63 l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~g-~v~~V~~---~g-----~~~~ad~VV~a~p~~~~~~Ll 124 (343)
...++...+++.| ++|++++.|++|..+++ + ++++|++ +| .+++|+.||+|+++..+.+||
T Consensus 228 ~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~-g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 228 LDKTYLAQAAATGKLTITTLHRVTKVAPATG-SGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp TTTTHHHHHHHTTCEEEECSEEEEEEEECSS-SSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCcEEEeCCEEEEEEECCC-CCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 4455555555665 89999999999999764 4 7888877 34 257899999999998766543
No 95
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=95.14 E-value=0.046 Score=47.65 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=44.5
Q ss_pred hhhHHHHHHHHH-cCCeEEcceeeeEEEecCCCCeEEEEEEC----------C-----eEEecCEEEEeeChhh
Q 019274 62 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----------K-----ETYSAGAVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----------g-----~~~~ad~VV~a~p~~~ 119 (343)
.+...|.+.+.+ .|++|+++++|++|..++ +++.+|.+. + .+++||.||+|++...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccCceEEEECCEEEECCCCch
Confidence 466677777765 699999999999999877 677777652 1 5789999999999753
No 96
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.13 E-value=0.03 Score=51.69 Aligned_cols=56 Identities=16% Similarity=0.222 Sum_probs=46.3
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.+.+.+++.|++|++++.|++|..++ ++.+|++. |++++||.||++++...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEECCCCEEEcCEEEEeeCCee
Confidence 4467788888999999999999999998643 45678885 67899999999998754
No 97
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.09 E-value=0.038 Score=49.28 Aligned_cols=57 Identities=16% Similarity=0.031 Sum_probs=47.0
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.+.+.+++.|++++++++|++|..++ +.+.+|+++++++++|.||+|++...
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDGRQWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTSCEEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCCCEEEeCEEEECCCCCC
Confidence 4577888888889999999999999999877 54322777766899999999999754
No 98
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.05 E-value=0.032 Score=51.02 Aligned_cols=61 Identities=18% Similarity=0.156 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHHc-CCeEEcceeeeEEEecCCCCeEE-EEEEC-CeEEecCEEEEeeChhhH-HHhh
Q 019274 62 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCIS-DVVCG-KETYSAGAVVLAVGISTL-QELI 124 (343)
Q Consensus 62 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~-~V~~~-g~~~~ad~VV~a~p~~~~-~~Ll 124 (343)
.|.+.|.+.+++. |++|+++++|++|..++ ++++ .|++. |++++||.||.|.+.... .+.+
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEECCCCEEECCEEEECCCCChHHHHHh
Confidence 5778888888887 89999999999999877 4443 57765 568999999999999775 3444
No 99
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.00 E-value=0.042 Score=51.55 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=46.5
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEE-EC-CeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV-CG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~-~~-g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..+++ +. ..|+ ++ |+ +++|.||+|++...
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~-~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD-GR-RVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SC-EEEEESSSCE-EEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-CE-EEEEEcCCCe-EEeCEEEEeeCccc
Confidence 455788899999999999999999999988763 43 4677 65 55 99999999998743
No 100
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.00 E-value=0.047 Score=51.71 Aligned_cols=57 Identities=18% Similarity=0.260 Sum_probs=46.2
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..+++ +. ..|++. |+++++|.||+|++..
T Consensus 234 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~-~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 234 DETIREEVTKQLTANGIEIMTNENPAKVSLNTD-GS-KHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT-SC-EEEEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-ce-EEEEECCCcEEEcCEEEECCCCc
Confidence 345788889999999999999999999987652 33 456665 6689999999999864
No 101
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.99 E-value=0.038 Score=52.27 Aligned_cols=56 Identities=20% Similarity=0.356 Sum_probs=46.6
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|.. + +++..|.++++++++|.||+|++..
T Consensus 235 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~--~~v~~v~~~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 235 DRDLTDLMAKNMEEHGIQLAFGETVKEVAG-N--GKVEKIITDKNEYDVDMVILAVGFR 290 (490)
T ss_dssp CHHHHHHHHHHHHTTTCEEEETCCEEEEEC-S--SSCCEEEESSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHHhCCeEEEeCCEEEEEEc-C--CcEEEEEECCcEEECCEEEECCCCC
Confidence 455778888999999999999999999985 3 5555677788889999999999864
No 102
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.96 E-value=0.055 Score=50.75 Aligned_cols=56 Identities=16% Similarity=0.160 Sum_probs=47.1
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.+.+.+++.|++|+++++|++|..++ +. +.|.++++++++|.||+|++...
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMD--GE-FVLTTTHGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEET--TE-EEEEETTEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CE-EEEEECCcEEEcCEEEECCCCCc
Confidence 4578889999999999999999999998765 43 46777777899999999998753
No 103
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.95 E-value=0.045 Score=51.79 Aligned_cols=58 Identities=14% Similarity=0.190 Sum_probs=46.6
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..+++ +. ..|++. |+++++|.||+|++...
T Consensus 230 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~-~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 230 DSELRKQLTEQLRANGINVRTHENPAKVTKNAD-GT-RHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT-SC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CE-EEEEECCCcEEEcCEEEEccCCCc
Confidence 345788889999999999999999999987652 33 456665 56899999999998643
No 104
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.92 E-value=0.055 Score=50.99 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=45.7
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C-eEEecCEEEEeeCh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGI 117 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g-~~~~ad~VV~a~p~ 117 (343)
...+.+.+.+.+++.|++|+++++|++|..+++ +++..|+++ | +++++|.||+|++.
T Consensus 225 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 225 DECIQNTITDHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEECCCcEEEEcCEEEECCCC
Confidence 345778888999999999999999999987643 433457765 6 68999999999985
No 105
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.92 E-value=0.049 Score=51.62 Aligned_cols=57 Identities=12% Similarity=0.158 Sum_probs=46.5
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|+++ |++++||.||+|++...
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTRTG--AGV-LVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CEE-EEEECCCcEEEcCEEEECCCCCc
Confidence 34577888999999999999999999998766 444 46665 56899999999998754
No 106
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.87 E-value=0.058 Score=51.08 Aligned_cols=56 Identities=16% Similarity=0.157 Sum_probs=45.8
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.+.+.++++|++|+++++|++|..++ +++ .|++. |++++||.||++++...
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEECCCCEEECCEEEECCCCCc
Confidence 4467788888999999999999999998765 554 57765 67899999999998643
No 107
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.72 E-value=0.06 Score=49.08 Aligned_cols=56 Identities=16% Similarity=0.117 Sum_probs=46.2
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.+.+.+++.|++|+++++|++|..++ +. ..|++. |++++||.||+|++...
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EG-LEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEET--TE-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecC--CE-EEEEECCCCEEECCEEEECcCCCc
Confidence 4577889999999999999999999998765 44 356665 67899999999998744
No 108
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.68 E-value=0.053 Score=51.17 Aligned_cols=56 Identities=25% Similarity=0.300 Sum_probs=46.7
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|++. |++++||.||+|++..
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEECCCcEEEcCEEEEeeCCC
Confidence 34578888999999999999999999998876 444 57775 5689999999999864
No 109
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=94.65 E-value=0.069 Score=51.11 Aligned_cols=58 Identities=17% Similarity=0.168 Sum_probs=48.2
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
..+.+.|.+.+++.|++++.+ +|++|..+++ |.++.|++. |++++||.||.|.+....
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 457888999998899999999 8999988654 666678776 558999999999998764
No 110
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=94.60 E-value=0.058 Score=50.77 Aligned_cols=57 Identities=19% Similarity=0.262 Sum_probs=47.4
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC--CeEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--g~~~~ad~VV~a~p~~~~ 120 (343)
..+.+.|.+.+++.|++|+.+++| +|..++ ++|.+|.+. ++++.||.||+|++....
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 457889999888889999999999 998877 788788763 346789999999998653
No 111
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.56 E-value=0.1 Score=49.22 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=47.6
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..+ ++++.|.++++++++|.||+|++...
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~~~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKGN---ERVEAVETDKGTYKADLVLVSVGVKP 282 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES---SBEEEEEETTEEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEECCCEEEcCEEEECcCCCc
Confidence 3457788899999999999999999999754 45667778877899999999998653
No 112
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=94.52 E-value=0.062 Score=52.26 Aligned_cols=55 Identities=18% Similarity=0.152 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHH-cCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 62 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
.+.+.|.+.+++ .|++| +++.|++|..++ ++|++|.+. |.++.||.||+|++...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKN--NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 477888888888 48999 678999999887 778889886 66899999999999864
No 113
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.50 E-value=0.074 Score=49.67 Aligned_cols=57 Identities=11% Similarity=0.151 Sum_probs=45.9
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..+++ +. ..|++. |+++++|.||+|++..
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~-~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 207 DPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD-GS-LTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp CHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT-SC-EEEEETTSCEEEESEEEECSCEE
T ss_pred hHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-cE-EEEEECCCcEEEcCEEEECCCCC
Confidence 345778888999999999999999999987653 43 356665 6689999999999764
No 114
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.47 E-value=0.068 Score=51.99 Aligned_cols=58 Identities=19% Similarity=0.181 Sum_probs=48.3
Q ss_pred hhhhHHHHHHHHHcC-CeEEcceeeeEEEecCCCCeEEEEEE---C-Ce--EEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---G-KE--TYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~g~v~~V~~---~-g~--~~~ad~VV~a~p~~~~ 120 (343)
..+.+.|.+.+++.| ++|+++++|++|..++ ++|++|.. . |+ ++.|+.||+|++....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 358889999988888 9999999999999876 78877753 2 55 6899999999998653
No 115
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=94.26 E-value=0.069 Score=52.10 Aligned_cols=55 Identities=20% Similarity=0.158 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHH-cCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 62 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
.+.+.|.+.+++ .|++| ++++|++|..++ ++|++|.+. |.+++||.||+|++...
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 477888888888 59999 678999999877 778889886 66899999999999864
No 116
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=94.22 E-value=0.093 Score=46.38 Aligned_cols=52 Identities=10% Similarity=0.017 Sum_probs=40.5
Q ss_pred hHHHHHHHHHc-CCeEEcceeeeEEEecCCCCeEEEEEEC----C--eEEecCEEEEeeCh
Q 019274 64 FEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGI 117 (343)
Q Consensus 64 ~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g--~~~~ad~VV~a~p~ 117 (343)
.+.+.+.+.+. |++|+++++|.+|..++ +++.+|++. | .++++|.||++++.
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEESS--SSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEccc--CcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 45666677665 99999999999998876 556666653 2 47899999999886
No 117
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=94.20 E-value=0.088 Score=47.30 Aligned_cols=55 Identities=11% Similarity=0.046 Sum_probs=44.4
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE---CC--eEEecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~g--~~~~ad~VV~a~p~~ 118 (343)
.+.+.|.+.+++.|++|+++++|++|..++ +++.+|++ +| .++++|.||++++..
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN--GVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET--TEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC--CceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 366777788888899999999999998876 66666766 45 478999999999853
No 118
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.13 E-value=0.086 Score=49.24 Aligned_cols=57 Identities=21% Similarity=0.203 Sum_probs=46.6
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .+++. ++++++|.||+|++...
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA--KGA-RVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE-EEEECCCeEEEcCEEEECcCCCc
Confidence 35578889999999999999999999998766 443 46664 67899999999998754
No 119
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.13 E-value=0.075 Score=49.50 Aligned_cols=57 Identities=25% Similarity=0.383 Sum_probs=46.7
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..+ ++++.|.++++++++|.||+|++...
T Consensus 190 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 190 DKEFTDVLTEEMEANNITIATGETVERYEGD---GRVQKVVTDKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp CHHHHHHHHHHHHTTTEEEEESCCEEEEECS---SBCCEEEESSCEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc---CcEEEEEECCCEEECCEEEECcCCCC
Confidence 3457788889999999999999999999854 34556777777899999999998643
No 120
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=94.03 E-value=0.06 Score=51.61 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=44.0
Q ss_pred hhhhHHHHHHHHH-cCCeEEcceeeeEEEecCCCC------eEEEEEE----CCe--EEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERC------CISDVVC----GKE--TYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g------~v~~V~~----~g~--~~~ad~VV~a~p~~~ 119 (343)
..+.+.|.+.+++ .|++|+++++|++|..+++ + +|++|.+ +|+ ++.|+.||+|++...
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 3577788888888 6999999999999998332 5 7877766 254 689999999999865
No 121
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=93.97 E-value=0.12 Score=49.24 Aligned_cols=58 Identities=14% Similarity=0.206 Sum_probs=47.0
Q ss_pred hhhhHHHHHHHHH-cCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
..+.+.|.+.+++ .|++++.+ +|++|..+++ +.++.|++. |++++||.||.|.+....
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3477888888888 89999999 5999988754 655677775 567999999999998764
No 122
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.95 E-value=0.14 Score=44.96 Aligned_cols=51 Identities=18% Similarity=0.352 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEeeCh
Q 019274 65 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g~--~~~ad~VV~a~p~ 117 (343)
..+.+.+++.|++|+++++|++|..++ +++.+|++ +|+ ++.+|.||++++.
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 456777788999999999999998765 55656655 343 6899999998865
No 123
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.92 E-value=0.093 Score=47.16 Aligned_cols=55 Identities=18% Similarity=0.166 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
.+.+.+.+.+++.|++|+++++|++|..++ +. +.|.+.+++++||+||+|++...
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~g~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADD--AY-YTIATTTETYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS--SS-EEEEESSCCEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECC--Ce-EEEEeCCCEEEeCEEEECCCCCC
Confidence 356677777888899999999999999876 33 45777655789999999999864
No 124
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.81 E-value=0.13 Score=48.75 Aligned_cols=57 Identities=12% Similarity=0.103 Sum_probs=45.7
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeE-EecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KET-YSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~-~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..+++ +. ..|+++ |++ +++|.||++++..
T Consensus 216 d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~-~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 216 DESVINVLENDMKKNNINIVTFADVVEIKKVSD-KN-LSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESST-TC-EEEEETTSCEEEEESEEEECCCBC
T ss_pred chhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC-ce-EEEEECCCcEEEECCEEEECCCCC
Confidence 355778889999999999999999999987653 43 356665 566 8999999999864
No 125
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.71 E-value=0.16 Score=47.59 Aligned_cols=56 Identities=18% Similarity=0.130 Sum_probs=45.5
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-Ce-EEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE-TYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~-~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +. ..|+++ |+ ++++|.||+|++..
T Consensus 206 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 206 DPLLSATLAENMHAQGIETHLEFAVAALERDA--QG-TTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEESSCCEEEEEEET--TE-EEEEETTCCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--Ce-EEEEEeCCcEEEEcCEEEECCCCC
Confidence 34577888889999999999999999998765 33 456665 66 79999999999864
No 126
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.55 E-value=0.18 Score=45.93 Aligned_cols=60 Identities=12% Similarity=0.042 Sum_probs=36.1
Q ss_pred eeEeecCCCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeC
Q 019274 51 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVG 116 (343)
Q Consensus 51 ~~~~~~gG~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p 116 (343)
.+.-+.|| ++.|+++|++.+ +.+|++|++|++|...++ | |..+..+......-+|.+.+-
T Consensus 311 ~~~~i~GG-~~~l~~~l~~~l---~~~i~l~~~V~~I~~~~~-g-v~v~~~~~~~~~g~~~~~~~~ 370 (376)
T 2e1m_A 311 TYWEIEGG-SRMLPETLAKDL---RDQIVMGQRMVRLEYYDP-G-RDGHHGELTGPGGPAVAIQTV 370 (376)
T ss_dssp CEEEETTC-TTHHHHHHHHHG---GGTEECSEEEEEEEECCC-C--------------CCEEEEEE
T ss_pred ceEEECCc-HHHHHHHHHHhc---CCcEEecCeEEEEEECCC-c-eEEEeCCCcCCCCCeeEEEec
Confidence 34456899 467999999887 568999999999998774 4 322222212233455666553
No 127
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.55 E-value=0.16 Score=45.99 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=46.1
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH-HHhh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL-QELI 124 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~-~~Ll 124 (343)
.|.+.|.+.+++.|++|+++++|++|.. + + .|++. |++++||.||.|.+.... .+.+
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V--G---RLTLQTGEVLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T--T---EEEETTSCEEECSEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C---EEEECCCCEEEcCEEEECCCccHHHHHHh
Confidence 4678888899889999999999999987 4 6 35555 668999999999999764 3444
No 128
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.48 E-value=0.19 Score=47.14 Aligned_cols=56 Identities=20% Similarity=0.220 Sum_probs=44.5
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C---eEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K---ETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g---~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +.+. |++. + .++++|.||++++..
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~-v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKN--KQVT-VKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECS--SCEE-EEEESSSEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC--CEEE-EEEEeCCCcEEEECCEEEEeeCCc
Confidence 45578888899999999999999999998876 4443 4442 2 578999999999864
No 129
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=93.47 E-value=0.15 Score=49.92 Aligned_cols=57 Identities=19% Similarity=0.260 Sum_probs=47.1
Q ss_pred hhhhHHHHHHHHHc-CC-eEEcceeeeEEEecCCCC---eEEEEEE---C-Ce--EEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTR-GC-EFLDGRRVTDFIYDEERC---CISDVVC---G-KE--TYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~-G~-~i~~~~~V~~I~~~~~~g---~v~~V~~---~-g~--~~~ad~VV~a~p~~~ 119 (343)
..+.+.|.+.+++. |+ +|+.+++|++|..++ + +|++|.. . |+ .+.|+.||+|++...
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDN--NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECT--TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcC--CccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 35778888888887 99 999999999999876 6 8888864 2 43 689999999998765
No 130
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.47 E-value=0.12 Score=45.43 Aligned_cols=56 Identities=13% Similarity=0.138 Sum_probs=46.1
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
..+.+.+.+.+++.|.+++++++|++|..+++ +. +.|.++++++.+|+||+|++..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~-~~v~~~~g~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQAD-GV-FKLVTNEETHYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTT-SC-EEEEESSEEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCC-Cc-EEEEECCCEEEeCEEEECCCCC
Confidence 45778888888888999999999999998763 33 5677876669999999999983
No 131
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.44 E-value=0.18 Score=47.25 Aligned_cols=57 Identities=18% Similarity=0.258 Sum_probs=44.6
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE------CCeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC------GKETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~------~g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|++ +++++++|.||++++..
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATKKSD-GKI-DVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTT-SCE-EEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCC-ceE-EEEEEecCCCCceEEEcCEEEECcCCC
Confidence 455778888999999999999999999987662 323 3442 24689999999999864
No 132
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.27 E-value=0.17 Score=48.65 Aligned_cols=57 Identities=14% Similarity=0.300 Sum_probs=44.8
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEec------------------CCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD------------------EERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~------------------~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|+++++++.|++|..+ .+ +++. +.+. |++++||.||+|++..
T Consensus 191 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 191 DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK-GHLS-LTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT-CEEE-EEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC-CcEE-EEEcCCCEEEcCEEEECcCCc
Confidence 3457788888899999999999999999873 22 5543 4444 6789999999999864
No 133
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.21 E-value=0.19 Score=46.20 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=43.0
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|. + + .|++. |+++++|.||++++..
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~--~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSV--D--G---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEE--T--T---EEEETTSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C--C---EEEECCCCEEEcCEEEECcCCC
Confidence 34577888889999999999999999998 4 5 35554 6789999999999864
No 134
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=93.21 E-value=0.17 Score=44.18 Aligned_cols=49 Identities=12% Similarity=0.163 Sum_probs=38.2
Q ss_pred HHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC---Ce--EEecCEEEEeeCh
Q 019274 67 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSAGAVVLAVGI 117 (343)
Q Consensus 67 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~---g~--~~~ad~VV~a~p~ 117 (343)
+.+.+++.|++++++++|.+|..++ +++.+|++. |+ ++++|.||++++.
T Consensus 189 ~~~~~~~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 189 VEKVKKNEKIELITSASVDEVYGDK--MGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHHCTTEEEECSCEEEEEEEET--TEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHHHhcCCeEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 3444567899999999999998776 677667653 43 7899999999885
No 135
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=93.19 E-value=0.28 Score=46.98 Aligned_cols=79 Identities=14% Similarity=0.141 Sum_probs=49.5
Q ss_pred HHHHHHHHhhhcccCCCCceeeeEEEecCCCccc-cCCCCCCCCCCCCC-CCCCeEEeeccccCCCCCccchHHHHHHHH
Q 019274 214 VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTH-FFPGSYKYMMRGFT-SFPNLFMAGDWITTRHGSWSQERSYVTGLE 291 (343)
Q Consensus 214 ~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~-~~~g~~~~~p~~~~-~~~~L~laGd~~~~g~~~~~~ega~~Sg~~ 291 (343)
+.+.+..+.+.+|++...+.+-+-+- .+.+-|. ...+ ...++ .++|||.|||. .|+. +++..|..+|..
T Consensus 463 l~e~~~~~~~~~~g~~~~~~~l~g~e-~~~ssp~ri~~~-----~~~~~~~~~gly~~Geg--aG~a-~gi~~Aa~~G~~ 533 (549)
T 3nlc_A 463 IREAIPAFDRKIKGFASEDGLLTGVE-TRTSSPVCIKRG-----KDFQSVNLKGFYPAGEG--AGYA-GGILSAGIDGIK 533 (549)
T ss_dssp HHHHHHHHHTTSTTTTCTTCEEEEEE-CCSSCSEECCCT-----TTTSCTTCBTEEECHHH--HTSC-CSHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCCCCCcEEEEEe-eccCCceeEEEC-----CCceECCcCCEEEcccc--CChh-hHHHHHHHHHHH
Confidence 34456777777898854222211111 2222111 1111 22334 68999999999 4777 688999999999
Q ss_pred HHHHHHHHhC
Q 019274 292 AANRVVDYLG 301 (343)
Q Consensus 292 aA~~il~~~~ 301 (343)
||+.|++.+.
T Consensus 534 ~a~~i~~~~~ 543 (549)
T 3nlc_A 534 VAEAVARDIV 543 (549)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 136
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=93.15 E-value=0.083 Score=50.09 Aligned_cols=60 Identities=12% Similarity=0.029 Sum_probs=45.4
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CC--eEEecCEEEEeeChhhH
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGISTL 120 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g--~~~~ad~VV~a~p~~~~ 120 (343)
..+.+.|.+.+++.|++|+++++|++|..+++++..+.|++ +| .+++||.||.|++....
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 34667888888889999999999999987521033356666 34 36899999999998764
No 137
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.13 E-value=0.31 Score=45.68 Aligned_cols=58 Identities=14% Similarity=0.101 Sum_probs=45.0
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECC--------eEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--------ETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g--------~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|++++.|++|..+++ +....|.+.+ .++++|.||++++..
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-GLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS-SEEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 355778888999999999999999999987653 5223455542 578999999999864
No 138
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.08 E-value=0.29 Score=43.23 Aligned_cols=53 Identities=15% Similarity=0.085 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CC--eEEecCEEEEeeCh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGI 117 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g--~~~~ad~VV~a~p~ 117 (343)
.+.+.+.+.+++.|+++++++.|.+|..+ +++.+|++ +| .++++|.||++++.
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 35677778888889999999999999874 34455655 45 47899999999886
No 139
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.04 E-value=0.25 Score=46.21 Aligned_cols=56 Identities=13% Similarity=0.123 Sum_probs=44.6
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE--C--Ce--EEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KE--TYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~--g~--~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++ + |+ ++++|.||+|++..
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKKK--DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEE-EEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC--CEE-EEEEeecCCCceeEEEcCEEEECCCcc
Confidence 34577888889999999999999999998766 443 3554 4 55 78999999999864
No 140
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.90 E-value=0.27 Score=45.93 Aligned_cols=57 Identities=14% Similarity=0.272 Sum_probs=43.7
Q ss_pred chhhhHHHHHHH-HHcCCeEEcceeeeEEEecCCCCeEEEEEE---CC--eEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSM-RTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l-~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~g--~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+ ++.|++|+++++|++|..++ +.+ .|.+ +| +++++|.||+|++...
T Consensus 214 d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 214 DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG--DSV-SLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS--SSE-EEEEECC---EEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC--CeE-EEEEEcCCCceEEEECCEEEECCCccc
Confidence 345678888999 99999999999999998765 333 3444 34 5789999999998643
No 141
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.63 E-value=0.32 Score=45.39 Aligned_cols=56 Identities=14% Similarity=0.235 Sum_probs=44.3
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE--CC--eEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~g--~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .+.+ +| .++++|.||++++..
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 211 DADVSKEIEKQFKKLGVTILTATKVESIADGG--SQV-TVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCEEEEEEECS--SCE-EEEEESSSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC--CeE-EEEEEcCCceEEEEcCEEEECCCCC
Confidence 34577888889999999999999999998765 443 3554 45 578999999999864
No 142
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=92.61 E-value=0.18 Score=48.22 Aligned_cols=57 Identities=30% Similarity=0.334 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHHcCC--eEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 62 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~--~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
.+.+.+.+.+++.|. +|+++++|+++..+++ +..+.|+++ |++++||.||+|++...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD-ENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT-TTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC-CCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 467778888888888 8999999999998764 334678886 56799999999999643
No 143
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.52 E-value=0.2 Score=48.06 Aligned_cols=56 Identities=23% Similarity=0.125 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHHcCC--eEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~--~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+.+++.|. +|+++++|+++..+++ +..+.|+++ |++++||.||+|++..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE-GLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT-TTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC-CCEEEEEECCCCEEEeCEEEECcCCC
Confidence 466777777888887 8999999999998764 334678886 6679999999999964
No 144
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.47 E-value=0.28 Score=45.64 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=44.5
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE--C--CeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~--g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++ + +.++++|.||++++...
T Consensus 210 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 210 EKQMAAIIKKRLKKKGVEVVTNALAKGAEERE--DGV-TVTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEE-EEEEEETTEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeE-EEEEEeCCceeEEEcCEEEECcCCCc
Confidence 34577888889999999999999999998765 443 3443 2 35789999999998643
No 145
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=92.25 E-value=0.2 Score=49.16 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHc--CCeEEcceeeeEEEecCCCC---eEEEEEE----CCe--EEecCEEEEeeChhh
Q 019274 62 KIFEPWMDSMRTR--GCEFLDGRRVTDFIYDEERC---CISDVVC----GKE--TYSAGAVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~~--G~~i~~~~~V~~I~~~~~~g---~v~~V~~----~g~--~~~ad~VV~a~p~~~ 119 (343)
.+.+.|.+.+++. |++|+.++.|.+|..++ + +|.+|.. +|+ .+.|+.||+|++...
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~--~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDK--NTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECS--SSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeC--CccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 5788899998887 99999999999999876 5 8888864 243 579999999998754
No 146
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=92.17 E-value=0.2 Score=47.08 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=44.8
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE-C----CeEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----KETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~-~----g~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +. ..|++ + |+++++|.||++++...
T Consensus 225 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~-~~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 225 DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE--DG-VYVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp CHHHHHHHHHHHGGGEEEEECSCEEEEEEEET--TE-EEEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC--Ce-EEEEEeccCCCceEEEcCEEEECcCCCc
Confidence 45577888899999999999999999998765 43 34544 3 45789999999998643
No 147
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=92.15 E-value=0.21 Score=48.72 Aligned_cols=55 Identities=16% Similarity=0.082 Sum_probs=45.4
Q ss_pred hhhHHHHHHHHHc-CCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 62 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
.+.+.|.+.+++. |++|+ +..|++|..++ ++|++|.+. |.+++||.||+|++.+.
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~--g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS--GKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC--CEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 4678888888874 89985 56999998877 778888886 66899999999999764
No 148
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.12 E-value=0.28 Score=46.08 Aligned_cols=57 Identities=19% Similarity=0.149 Sum_probs=44.0
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C-----eEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-----ETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g-----~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..+++ +++ .|++. + .++++|.||++++..
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDD-GKL-LVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTT-SCE-EEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CcE-EEEEecCCCCceeEEEcCEEEECcccc
Confidence 345778888999999999999999999987653 443 35442 2 268999999999864
No 149
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.09 E-value=0.28 Score=47.34 Aligned_cols=54 Identities=13% Similarity=0.146 Sum_probs=44.4
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..++ + +|++. |+++++|.||+|++..
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENG--A---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG--T---EEEETTSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCC--C---EEEECCCCEEEcCEEEEccCCC
Confidence 45578889999999999999999999998655 4 24554 6789999999999864
No 150
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=92.01 E-value=0.26 Score=46.18 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=43.8
Q ss_pred hhhhHHHHHHHHHcCCe--EEcceeeeEEEecCCCCeEEEEEEC----C--eEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCE--FLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~--i~~~~~V~~I~~~~~~g~v~~V~~~----g--~~~~ad~VV~a~p~~~ 119 (343)
..+.+.|.+.+++.|.+ |+++++|++|..++++++ +.|++. | .+++||+||+|++...
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~-~~V~~~~~~~g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQT-FTVTVQDHTTDTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCc-EEEEEEEcCCCceEEEEcCEEEECCCCCC
Confidence 34677788888888988 999999999988763123 456553 3 4789999999999644
No 151
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.01 E-value=0.27 Score=44.01 Aligned_cols=57 Identities=14% Similarity=0.209 Sum_probs=45.8
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.+.+.+++.|.+++++++|++|..+++ +. +.|.+. +.++++|.||+|++...
T Consensus 74 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~-~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 74 IDLVESLWAQAERYNPDVVLNETVTKYTKLDD-GT-FETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEECSCCEEEEEECTT-SC-EEEEETTSCEEEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHHHhCCEEEcCCEEEEEEECCC-ce-EEEEECCCcEEEeeEEEEccCCCc
Confidence 44777888888888999999999999998763 33 457776 56899999999999843
No 152
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.00 E-value=0.43 Score=44.94 Aligned_cols=56 Identities=20% Similarity=0.236 Sum_probs=44.5
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC----C--eEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g--~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++. | .++++|.||+|++..
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~--~~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG--DGA-KVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEE-EEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC--CEE-EEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 45578888899999999999999999998776 443 34432 4 578999999999864
No 153
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=91.93 E-value=0.34 Score=45.40 Aligned_cols=56 Identities=18% Similarity=0.273 Sum_probs=43.8
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEe--cCCCCeEEEEEEC------CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVCG------KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~--~~~~g~v~~V~~~------g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|.. ++ +. ..|++. ++++++|.||+|++..
T Consensus 223 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 223 DGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK--NV-VEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT--TE-EEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC--Ce-EEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 345778889999999999999999999987 33 33 445542 3578999999999864
No 154
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.92 E-value=0.32 Score=42.42 Aligned_cols=51 Identities=10% Similarity=0.239 Sum_probs=38.4
Q ss_pred HHHHHHHHH-cCCeEEcceeeeEEEecCCCCeEEEEEEC----C--eEEecCEEEEeeCh
Q 019274 65 EPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g--~~~~ad~VV~a~p~ 117 (343)
+.+.+.+++ .|++|+++++|++|..++ +++.+|++. | .++.+|.||++++.
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEESS--SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcCC--CcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 445666776 699999999999998765 666566652 3 26789999998764
No 155
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.75 E-value=0.28 Score=42.78 Aligned_cols=57 Identities=11% Similarity=0.184 Sum_probs=44.2
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+.+++.|++++.+++|++|..+.+++..+.|.++ ++++++|.||+|++..
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 46777888888889999999999999765310223567776 5689999999999974
No 156
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=91.65 E-value=0.28 Score=46.88 Aligned_cols=59 Identities=14% Similarity=0.202 Sum_probs=44.9
Q ss_pred HHHHHHHHH-cCCeEEcceeeeEEEecCCCCeEEEEEEC----Ce--EE---ecCEEEEeeChhhHHHhhh
Q 019274 65 EPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TY---SAGAVVLAVGISTLQELIK 125 (343)
Q Consensus 65 ~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g~--~~---~ad~VV~a~p~~~~~~Ll~ 125 (343)
.++.+.+.+ .+++|++++.|++|..++ +++++|++. |+ ++ .++.||+|++.....+|+.
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~ 267 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILF 267 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHH
Confidence 345555554 489999999999999987 789999874 32 33 7899999999977666543
No 157
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.57 E-value=0.33 Score=42.84 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=44.6
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
..+.+.+.+.+++.|.+++++++|++|..++ +. +.|.++ +.++++|.||+|++..
T Consensus 65 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~-~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVAPFNPVYSLGERAETLEREG--DL-FKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHGGGCCEEEESCCEEEEEEET--TE-EEEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEECC--CE-EEEEECCCCEEEeCEEEECCCCC
Confidence 3467778888888899999999999998876 43 457676 5589999999999974
No 158
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=91.54 E-value=0.14 Score=50.61 Aligned_cols=54 Identities=11% Similarity=0.083 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
+.+.+.+.+++.|++|+++++|++|..++ ..+..+.++ +++++||.||+|++..
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGAGG--VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEETTE--EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEECCe--EEEEEccCCeEEEEECCEEEECCCCC
Confidence 46778888999999999999999997432 222111122 3578999999999864
No 159
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.51 E-value=0.41 Score=44.73 Aligned_cols=57 Identities=16% Similarity=0.235 Sum_probs=44.5
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CC--eEEecCEEEEeeChhh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIST 119 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g--~~~~ad~VV~a~p~~~ 119 (343)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|.+ +| .++++|.||++++...
T Consensus 217 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 217 DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG--DGV-KLTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp CHHHHHHHHHHHHHSSCCEECSEEEEEEECSS--SSE-EEEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC--CeE-EEEEEecCCCcceEEECCEEEECCCCCc
Confidence 34577888999999999999999999998765 333 3443 33 5789999999998743
No 160
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=91.17 E-value=0.33 Score=46.00 Aligned_cols=57 Identities=12% Similarity=0.072 Sum_probs=42.8
Q ss_pred CCchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C----eEEecCEEEEeeCh
Q 019274 58 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K----ETYSAGAVVLAVGI 117 (343)
Q Consensus 58 G~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g----~~~~ad~VV~a~p~ 117 (343)
.+...+.+.+.+.+++.|++|++|++|++|.-+ +.+..+... | +++.||.||+|++.
T Consensus 269 ~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~---~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 269 MFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK---QLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEETTEEEEEECSS---EEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CCCHHHHHHHHHHHHhcceeeecCceEEEEeCC---ceEEEEEecCcccceeeeccCEEEEccCC
Confidence 445678888999999999999999999998532 322233332 3 36899999999874
No 161
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=90.97 E-value=0.31 Score=46.70 Aligned_cols=58 Identities=16% Similarity=0.119 Sum_probs=45.8
Q ss_pred hhhhHHHHHHHHHcCC--eEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 61 EKIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~--~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
..+.+.+.+.+++.|. +|+++++|+++..+++ +..+.|+++ |++++||.||+|++...
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~w~V~~~~G~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN-DRLWEVTLDNEEVVTCRFLISATGPLS 147 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG-GTEEEEEETTTEEEEEEEEEECCCSCB
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC-CCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 3466777777788787 8999999999998764 334678886 67899999999999644
No 162
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=90.96 E-value=0.31 Score=42.97 Aligned_cols=54 Identities=17% Similarity=0.232 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 119 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~ 119 (343)
.+.+.+.+.+++.|++++.++ |.+|..++ +. +.|.++++++++|.||+|++...
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~-~~v~~~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSS--KP-FKLFTDSKAILADAVILAIGAVA 124 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSS--SS-EEEECSSEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CE-EEEEECCcEEEcCEEEECCCCCc
Confidence 477788888888999999997 99998766 43 34666777899999999999853
No 163
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=90.75 E-value=0.61 Score=41.76 Aligned_cols=58 Identities=16% Similarity=0.242 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHH-cCCeEEcceeeeEEEecCC---------------CC--eEEEEEEC-------C--------eEEec
Q 019274 62 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEE---------------RC--CISDVVCG-------K--------ETYSA 108 (343)
Q Consensus 62 ~l~~~l~~~l~~-~G~~i~~~~~V~~I~~~~~---------------~g--~v~~V~~~-------g--------~~~~a 108 (343)
.+.+.|.+.+++ .|++|+.++.|++|..+++ .| +|.+|.+. + .+++|
T Consensus 161 d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A 240 (344)
T 3jsk_A 161 LFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA 240 (344)
T ss_dssp HHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc
Confidence 356788888887 4999999999999987651 02 67787651 2 36899
Q ss_pred CEEEEeeChhh
Q 019274 109 GAVVLAVGIST 119 (343)
Q Consensus 109 d~VV~a~p~~~ 119 (343)
+.||.|++...
T Consensus 241 k~VV~ATG~~s 251 (344)
T 3jsk_A 241 PVIISTTGHDG 251 (344)
T ss_dssp SEEEECCCSSS
T ss_pred CEEEECCCCCc
Confidence 99999998754
No 164
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=90.68 E-value=0.46 Score=45.45 Aligned_cols=56 Identities=18% Similarity=0.080 Sum_probs=46.6
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
-..+.+.+.+.+++.|+++++++.|+++...+ +++ .|.+. ++++.+|.|++|++-.
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~-~v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKI-LVEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEE
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEecC--CeE-EEEEcCCCeEEEEEEEEccccc
Confidence 45588899999999999999999999999877 554 46665 5678899999999853
No 165
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=90.48 E-value=0.25 Score=47.31 Aligned_cols=51 Identities=22% Similarity=0.328 Sum_probs=40.7
Q ss_pred HcCCeEEcceeeeEEEecCCCCeEEEEEEC----Ce--EEecC-EEEEeeChhhHHHhh
Q 019274 73 TRGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAG-AVVLAVGISTLQELI 124 (343)
Q Consensus 73 ~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g~--~~~ad-~VV~a~p~~~~~~Ll 124 (343)
+.|++|++++.|++|..+++ +++++|++. |+ ++.|+ .||+|++.....+|+
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~-~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL 278 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD-RRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLL 278 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT-SBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCC-CeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhh
Confidence 56899999999999999764 678888862 32 67898 999999996655554
No 166
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=90.33 E-value=0.41 Score=43.79 Aligned_cols=51 Identities=12% Similarity=0.095 Sum_probs=41.6
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
..+.+.+.+.+++.|++++++++|++|. + +. |++. |+++++|.||++++..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~--~--~~---v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIR--E--HE---IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEC--S--SE---EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEEC--C--Ce---EEECCCCEEeeeEEEECCCCC
Confidence 4578889999999999999999999985 2 22 4454 6789999999998863
No 167
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=90.13 E-value=0.81 Score=39.74 Aligned_cols=51 Identities=18% Similarity=0.187 Sum_probs=37.7
Q ss_pred HHHHHHHH-HcCCeEEcceeeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEeeCh
Q 019274 65 EPWMDSMR-TRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~~~l~-~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g~--~~~ad~VV~a~p~ 117 (343)
..+.+.+. +.|++|+++++|++|..++ +++.+|++ +|+ ++++|.||++++.
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 44556665 4699999999999998765 55555654 343 6899999998865
No 168
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=90.01 E-value=0.52 Score=41.28 Aligned_cols=50 Identities=16% Similarity=0.253 Sum_probs=37.4
Q ss_pred HHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC------CeEEecCEEEEeeCh
Q 019274 65 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG------KETYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~------g~~~~ad~VV~a~p~ 117 (343)
+...+.+++.|++++++++|.+|..++ + +..|++. +.++.+|.||++++.
T Consensus 193 ~~~~~~l~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 193 EHSVENLHASKVNVLTPFVPAELIGED--K-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HHHHHHHHHSSCEEETTEEEEEEECSS--S-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCeEEEeCceeeEEecCC--c-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 344556788999999999999998765 4 3445543 246899999998875
No 169
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=89.81 E-value=0.29 Score=46.23 Aligned_cols=50 Identities=16% Similarity=0.250 Sum_probs=40.2
Q ss_pred HHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 67 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 67 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
+.+.+++.|++|++++.|++|..++ ++..|+++ |+++++|.||++++...
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~~~---~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEGNE---KVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEECSS---SCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCcEEEeCCeeEEEecCC---ceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 3467888999999999999998543 45667775 67899999999998754
No 170
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=89.73 E-value=0.6 Score=42.47 Aligned_cols=58 Identities=10% Similarity=0.102 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH-HHhhh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL-QELIK 125 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~-~~Ll~ 125 (343)
+.+.|.+.+ .|++|+++++|++|..++ +.+ .|++. |++++||.||.|.+.... .+.+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~--~~v-~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDS--ETV-QMRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECS--SCE-EEEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecC--CEE-EEEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 444554443 389999999999999877 444 46665 668999999999999775 34443
No 171
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=89.69 E-value=0.19 Score=46.50 Aligned_cols=50 Identities=8% Similarity=-0.067 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE-C--CeEEecCEEEEeeCh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G--KETYSAGAVVLAVGI 117 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~-~--g~~~~ad~VV~a~p~ 117 (343)
+.+.+.+.+++.|++++++++|++|.. +.+ .+.. + ++++++|.||++++.
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~----~~v-~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP----DKV-IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS----SEE-EEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeC----CeE-EEEecCCCceEEeeeEEEECCCC
Confidence 677888899999999999999999853 222 2322 1 468999999998764
No 172
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.59 E-value=0.55 Score=44.83 Aligned_cols=56 Identities=16% Similarity=0.035 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHcC--CeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 63 IFEPWMDSMRTRG--CEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 63 l~~~l~~~l~~~G--~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
+.+.+...+++.+ .+|+++++|+++..+++ +..+.|+++ |++++||.||+|++...
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~w~V~~~~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEA-TNTWTVDTNHGDRIRARYLIMASGQLS 154 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETT-TTEEEEEETTCCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCC-CCeEEEEECCCCEEEeCEEEECcCCCC
Confidence 5555666666655 68999999999998764 334668776 56899999999999753
No 173
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.53 E-value=0.52 Score=43.72 Aligned_cols=56 Identities=14% Similarity=-0.137 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC----Ce---EEecCEEEEeeChhhH
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----KE---TYSAGAVVLAVGISTL 120 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g~---~~~ad~VV~a~p~~~~ 120 (343)
.+.+.|.+.+++.+..|+++++|++|..++ +. +.|++. |+ +++||.||+|++....
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~-~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKD--GS-WVVTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEET--TE-EEEEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--Ce-EEEEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 466777777777788999999999998776 54 445543 44 6899999999998543
No 174
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=89.44 E-value=0.26 Score=43.62 Aligned_cols=42 Identities=14% Similarity=0.272 Sum_probs=30.2
Q ss_pred CCCCCCCeEEeeccccC--CCC-C-ccchHHHHHHHHHHHHHHHHh
Q 019274 259 GFTSFPNLFMAGDWITT--RHG-S-WSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~--g~~-~-~~~ega~~Sg~~aA~~il~~~ 300 (343)
..|.+||+|.|||.... +.+ + ....+++.||+.||+.|++.+
T Consensus 279 ~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 279 AYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp ECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred eEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHh
Confidence 34678999999997531 111 1 244567889999999999876
No 175
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=89.42 E-value=0.95 Score=40.18 Aligned_cols=40 Identities=10% Similarity=0.189 Sum_probs=30.3
Q ss_pred hhhHHHHHHHHHc-CCeEEcceeeeEEEecCC-C-C--eEEEEEE
Q 019274 62 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEE-R-C--CISDVVC 101 (343)
Q Consensus 62 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~-~-g--~v~~V~~ 101 (343)
.+.+.|.+.+.+. |++|+.+++|++|..+++ + | +|.+|.+
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 3567788877775 999999999999988742 1 3 7888876
No 176
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=89.35 E-value=0.9 Score=42.66 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=43.3
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE-C---Ce--EEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~-~---g~--~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|++++.|++|...++ +.+ .|++ + |+ ++++|.||++++..
T Consensus 224 d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~-~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 224 DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT-NQL-QVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcE-EEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 355788888999999999999999999987543 443 3433 1 44 47899999999864
No 177
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.30 E-value=0.56 Score=40.86 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=43.2
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
..+.+.+.+.+++.|+++++ ++|++|..++ +. +.|.++ ++++++|.||+|++..
T Consensus 70 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~-~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 70 SDMIKVFNKHIEKYEVPVLL-DIVEKIENRG--DE-FVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-SCEEEEEEC----C-EEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEecC--CE-EEEEECCCCEEEcCEEEECcCCC
Confidence 34777888888889999999 8999998876 44 457776 4789999999999976
No 178
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=89.10 E-value=0.86 Score=40.01 Aligned_cols=51 Identities=8% Similarity=0.094 Sum_probs=37.4
Q ss_pred HHHH-HHHHHcCCeEEcceeeeEEEecCCCC--eEEEEEE----CC--eEEecCEEEEeeCh
Q 019274 65 EPWM-DSMRTRGCEFLDGRRVTDFIYDEERC--CISDVVC----GK--ETYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~-~~l~~~G~~i~~~~~V~~I~~~~~~g--~v~~V~~----~g--~~~~ad~VV~a~p~ 117 (343)
+.+. +.+++.|++|+++++|++|..++ + ++.+|++ +| .++.+|.||++++.
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~--~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYGDG--ERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESS--SSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeCCC--CccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 4444 33467899999999999998765 3 6555555 24 47899999999875
No 179
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=89.03 E-value=0.66 Score=43.05 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=45.2
Q ss_pred CchhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 59 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 59 ~~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
+...+.+.+.+.+++. +++++++.|.+|..++ ++..+..+++++++|.||+|++..
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~---~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE---RVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS---SCCEEEETTEEEECSEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC---cEEEEEeCCCEEECCEEEEeeCCc
Confidence 3455777888888888 9999999999997543 345567778899999999999864
No 180
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=89.02 E-value=0.96 Score=42.56 Aligned_cols=55 Identities=22% Similarity=0.131 Sum_probs=43.6
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE---CC--eEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~g--~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++. ++|+++++|++|..++ +++. |++ +| .++++|.||+|++..
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE--DAVE-VIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS--SSEE-EEEECTTCCEEEEEESEEEECSCCE
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC--CEEE-EEEEeCCCceEEEECCEEEEeeCCc
Confidence 345778888888877 9999999999998876 4443 544 45 578999999999864
No 181
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=88.97 E-value=0.62 Score=42.37 Aligned_cols=50 Identities=14% Similarity=0.064 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeCh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGI 117 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~ 117 (343)
+.....+.+++.|++++++++|++|..++ .. |+++ |+++.+|++|+|++.
T Consensus 64 l~~~~~~~~~~~~i~~~~~~~V~~id~~~--~~---v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 64 ILIKKNDWYEKNNIKVITSEFATSIDPNN--KL---VTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TBSSCHHHHHHTTCEEECSCCEEEEETTT--TE---EEETTSCEEECSEEEECCCE
T ss_pred ccCCCHHHHHHCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEecCC
Confidence 33445566778899999999999998765 43 5565 678999999999996
No 182
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.69 E-value=0.62 Score=44.28 Aligned_cols=57 Identities=9% Similarity=0.212 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+.+++.|++++.+++|++|..+.+.+..+.|.++ |.++++|.||+|++..
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 46778888888899999999999999764210223567776 5689999999999974
No 183
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=88.61 E-value=19 Score=35.12 Aligned_cols=38 Identities=18% Similarity=0.119 Sum_probs=28.2
Q ss_pred CCCeEEeeccccCCCCC--ccchHHHHHHHHHHHHHHHHh
Q 019274 263 FPNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 263 ~~~L~laGd~~~~g~~~--~~~ega~~Sg~~aA~~il~~~ 300 (343)
.++++++||..|...|. .+|+-++..|.+.|.+|...+
T Consensus 350 ~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl 389 (665)
T 1pn0_A 350 DERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL 389 (665)
T ss_dssp TTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH
Confidence 37899999998854442 567778888888877776544
No 184
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=88.29 E-value=0.58 Score=43.46 Aligned_cols=56 Identities=11% Similarity=-0.054 Sum_probs=40.0
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEE--EEEEC-Ce----EEecCEEEEeeCh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCIS--DVVCG-KE----TYSAGAVVLAVGI 117 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~--~V~~~-g~----~~~ad~VV~a~p~ 117 (343)
.+.+.+...+++.|.+|+++++|++|..++++++.+ .|++. ++ +++||+||+|++.
T Consensus 128 ~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 128 EFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 355666666677789999999999998762113343 34443 33 7899999999996
No 185
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=87.86 E-value=1.8 Score=40.08 Aligned_cols=42 Identities=19% Similarity=0.084 Sum_probs=32.8
Q ss_pred cCCeEEcceeeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEeeChh
Q 019274 74 RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 118 (343)
Q Consensus 74 ~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g~--~~~ad~VV~a~p~~ 118 (343)
.|++|+++++|++|..++ +. +.|++ +|+ ++++|.||+|++..
T Consensus 329 ~~v~i~~~~~v~~v~~~~--~~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA--QG-IELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEET--TE-EEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecC--CE-EEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 589999999999998776 44 34554 243 48999999999874
No 186
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=87.73 E-value=0.91 Score=39.41 Aligned_cols=54 Identities=19% Similarity=0.275 Sum_probs=42.6
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
..+.+.+.+.+++.|+++++ ++|++|..++ +. +.|.+. ++++++|.||+|++..
T Consensus 59 ~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~--~~-~~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 59 LDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD--SH-FVILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHHHHHHTTSCEEEC-SCEEEEEEET--TE-EEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC--CE-EEEEEcCCCEEECCEEEECCCCC
Confidence 34677788888888999998 7999998876 43 346554 6689999999999964
No 187
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=87.67 E-value=1.4 Score=38.50 Aligned_cols=50 Identities=14% Similarity=0.080 Sum_probs=36.5
Q ss_pred HHHHHHHHH-cCCeEEcceeeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEeeCh
Q 019274 65 EPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g~--~~~ad~VV~a~p~ 117 (343)
..+.+.+.+ .|++|+++++|++|..+ +++.+|++ +|+ ++++|.||++++.
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 445555554 59999999999999864 44556665 343 6899999999865
No 188
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=87.58 E-value=1.1 Score=40.75 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=43.1
Q ss_pred hhhHHHHHHHHH-cC-CeEEcceeeeEEEecCCCCeEEEEEE-C---C--eEEecCEEEEeeChhhH-HHhh
Q 019274 62 KIFEPWMDSMRT-RG-CEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGISTL-QELI 124 (343)
Q Consensus 62 ~l~~~l~~~l~~-~G-~~i~~~~~V~~I~~~~~~g~v~~V~~-~---g--~~~~ad~VV~a~p~~~~-~~Ll 124 (343)
.|.+.|.+.+++ .| ++|+++++|++|.. ++ + |. |++ + | .+++||.||.|.+.... .+.+
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~-~-v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RD-G-RV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET-T-EE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC-c-cE-EEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 366778888776 37 48999999999988 52 4 43 433 2 5 47899999999999775 3444
No 189
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.50 E-value=0.9 Score=39.82 Aligned_cols=53 Identities=17% Similarity=0.227 Sum_probs=43.0
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CCeEEecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g~~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+.+++.|+++++++ |++|..++ +. +.+.+ ++.++.+|.||+|++..
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~-~~v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLSS--KP-FKLWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECSS--SS-EEEEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CE-EEEEEEecCCCcEEEeCEEEECcCCC
Confidence 577888888999999999998 99998876 44 34555 35678999999999874
No 190
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=87.42 E-value=1.1 Score=41.53 Aligned_cols=52 Identities=10% Similarity=0.158 Sum_probs=42.3
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|+++++++.|+++. + .. |.+. |+++++|.||++++..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~--~~---v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAIN--G--NE---ITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEE--T--TE---EEETTSCEEECSEEEECCCEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEec--C--Ce---eeecCCeEEeeeeEEEEecee
Confidence 45688899999999999999999999875 2 32 4454 6789999999999853
No 191
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.37 E-value=1.2 Score=38.64 Aligned_cols=50 Identities=18% Similarity=0.379 Sum_probs=36.3
Q ss_pred HHHHHHHH-cCCeEEcceeeeEEEecCCCCeEEEEEEC----Ce--EEecCEEEEeeChh
Q 019274 66 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAGAVVLAVGIS 118 (343)
Q Consensus 66 ~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g~--~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+ .|++++++++|++|..++ ++.+|++. |+ ++++|.||++++..
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGDK---VVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESS---SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEeccC---ceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 34444544 499999999999998654 34556553 44 68999999999864
No 192
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.37 E-value=1.1 Score=40.37 Aligned_cols=52 Identities=17% Similarity=0.209 Sum_probs=40.8
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|. . .. |+++++++++|.||++++..
T Consensus 182 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~--~~---v~~~~g~i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 182 DEELSNMIKDMLEETGVKFFLNSELLEAN--E--EG---VLTNSGFIEGKVKICAIGIV 233 (367)
T ss_dssp CHHHHHHHHHHHHHTTEEEECSCCEEEEC--S--SE---EEETTEEEECSCEEEECCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCEEEEEE--e--eE---EEECCCEEEcCEEEECcCCC
Confidence 34577888899999999999999999996 3 32 45553239999999999864
No 193
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=86.86 E-value=0.73 Score=42.93 Aligned_cols=54 Identities=22% Similarity=0.328 Sum_probs=42.7
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C--eEEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K--ETYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g--~~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|+++++|++|.. + + + .++.+ | .++++|.||+|++..
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~--~-v-~v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 211 DSELTAPVAESLKKLGIALHLGHSVEGYEN-G--C-L-LANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T--E-E-EEECSSSCCCEECCSCEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C--C-E-EEEECCCceEEEECCEEEECcCCC
Confidence 345778888889999999999999999975 4 4 3 34433 4 578999999999864
No 194
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=86.67 E-value=1.2 Score=38.97 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+.+++.|++++. ++|++|..++ +. +.|.++++++++|.||+|++..
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~-~~v~~~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKTQ--GG-FDIETNDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEET--TE-EEEEESSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEeC--CE-EEEEECCCEEEeCEEEECCCCC
Confidence 4677788888888999998 7899998876 44 3466777789999999999974
No 195
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=86.01 E-value=0.98 Score=43.59 Aligned_cols=53 Identities=19% Similarity=0.254 Sum_probs=41.6
Q ss_pred HHcCCeEEcceeeeEEEecC---CCCeEEEEEEC---Ce--EEecC-EEEEeeChhhHHHhhh
Q 019274 72 RTRGCEFLDGRRVTDFIYDE---ERCCISDVVCG---KE--TYSAG-AVVLAVGISTLQELIK 125 (343)
Q Consensus 72 ~~~G~~i~~~~~V~~I~~~~---~~g~v~~V~~~---g~--~~~ad-~VV~a~p~~~~~~Ll~ 125 (343)
++.+.+|++++.|++|..+. + ++++||+.. |. ++.|+ .||+++++-...+||.
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~-~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~ 299 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTT-PRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILE 299 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSS-CEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHH
T ss_pred cCCCcEEEcCCEEEEEEeccCCCC-CEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHH
Confidence 45688999999999999982 2 789999863 43 56786 6999999988777653
No 196
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=85.92 E-value=0.81 Score=44.55 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=40.6
Q ss_pred cCCeEEcceeeeEEEecCCCCeEEEEEEC----Ce--EEecCEEEEeeChhhHHHhhhh
Q 019274 74 RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAGAVVLAVGISTLQELIKN 126 (343)
Q Consensus 74 ~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g~--~~~ad~VV~a~p~~~~~~Ll~~ 126 (343)
.|++|++++.|++|..+++++++++|++. |+ ++.||.||++++.....++|..
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~ 331 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVN 331 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHT
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHh
Confidence 37899999999999987531478888762 43 6789999999998776665543
No 197
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=85.63 E-value=0.49 Score=45.21 Aligned_cols=59 Identities=14% Similarity=0.191 Sum_probs=42.7
Q ss_pred HHHHHHHcCCeEEcceeeeEEEecCC-CCeEEEEEEC---Ce--EE---ecCEEEEeeChhhHHHhhh
Q 019274 67 WMDSMRTRGCEFLDGRRVTDFIYDEE-RCCISDVVCG---KE--TY---SAGAVVLAVGISTLQELIK 125 (343)
Q Consensus 67 l~~~l~~~G~~i~~~~~V~~I~~~~~-~g~v~~V~~~---g~--~~---~ad~VV~a~p~~~~~~Ll~ 125 (343)
+.+.+++.|.+|++++.|++|..+++ .+++++|++. |+ ++ .++.||+|+++....+|+.
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~ 267 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLL 267 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHH
Confidence 33334567899999999999998762 1378888762 43 34 4689999999977666543
No 198
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=85.23 E-value=0.55 Score=43.38 Aligned_cols=53 Identities=8% Similarity=-0.048 Sum_probs=38.9
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE-CC--eEEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~-~g--~~~~ad~VV~a~p~~ 118 (343)
....+.+.+.++++|+++++++.|++|. + +++. +.. +| +++.||.||++++..
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~--~~~~-~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAIE--P--DKVI-YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEEC--S--SEEE-EECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEEe--C--CceE-EEeeCCCceEeecceEEEeccCC
Confidence 3355677788899999999999999985 3 3332 333 23 478999999998753
No 199
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=85.04 E-value=0.61 Score=42.42 Aligned_cols=53 Identities=15% Similarity=0.085 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
|.+.|.+.++ +++|+++++|++|..++ +.+ .|++. |++++||.||.|.+....
T Consensus 130 l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v-~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 130 LRAILLNSLE--NDTVIWDRKLVMLEPGK--KKW-TLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp HHHHHHHTSC--TTSEEESCCEEEEEECS--SSE-EEEETTSCCEEESEEEECSCTTCS
T ss_pred HHHHHHhhcC--CCEEEECCEEEEEEECC--CEE-EEEECCCcEEecCEEEECCCcchh
Confidence 4445554443 36899999999999876 444 46665 668999999999998764
No 200
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=84.71 E-value=1.3 Score=40.76 Aligned_cols=50 Identities=10% Similarity=-0.012 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE---C-----CeEEecCEEEEeeCh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-----KETYSAGAVVLAVGI 117 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~-----g~~~~ad~VV~a~p~ 117 (343)
+.+.+.+.+++.|++++++++|++|.- +++. +.. + +.++.+|.||++++.
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~----~~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVED----NKMY-VTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEET----TEEE-EEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEC----CeEE-EEecccCCccccceEEEEeEEEEcCCC
Confidence 667788889999999999999999963 2222 221 2 347899999999763
No 201
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=84.53 E-value=1.3 Score=39.40 Aligned_cols=54 Identities=11% Similarity=0.111 Sum_probs=40.2
Q ss_pred hhhHHHHHHHHHcC-CeEEcceeeeEEEecCCCCeEEEEEEC-CeEE-ecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVCG-KETY-SAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~G-~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~-~ad~VV~a~p~~ 118 (343)
.+.+.+.+.+++.| ++|++++.|.+|..++ +. ..|++. |+++ .+|.||++++..
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~--~~-~~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNN--GQ-YHISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEET--TE-EEEEESSSCCEEESSCCEECCCBC
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecC--Cc-eEEEecCCeEeccCCceEEeeccC
Confidence 34577888888887 9999999999997655 43 346554 5555 469999998863
No 202
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=84.50 E-value=1.5 Score=41.58 Aligned_cols=51 Identities=10% Similarity=0.256 Sum_probs=38.3
Q ss_pred HHHHHHHHH-cCCeEEcceeeeEEEecCCCCeEEEEEEC----Ce--EEecCEEEEeeCh
Q 019274 65 EPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~~~l~~-~G~~i~~~~~V~~I~~~~~~g~v~~V~~~----g~--~~~ad~VV~a~p~ 117 (343)
+.+.+.+++ .|++|++++.|++|..++ +++.+|++. |+ ++.+|.||++++.
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEECS--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcCC--CcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 345666776 599999999999998765 666666652 43 6789999998774
No 203
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=84.15 E-value=1.9 Score=37.39 Aligned_cols=54 Identities=13% Similarity=0.155 Sum_probs=42.0
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
..+.+.+.+.+++.|++++.++ |+.|..++ +. +.|..++.++++|.||+|++..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~--~~-~~v~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 62 PLLMERMHEHATKFETEIIFDH-INKVDLQN--RP-FRLNGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEECSS--SS-EEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEEee-eeEEEecC--CE-EEEEeCCCEEEcCEEEECCCCC
Confidence 3467778888888999999996 99998765 44 3343456789999999999874
No 204
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=83.99 E-value=1.3 Score=38.54 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
+.........+.+..+..+..+....... . ..+..++++++||++|+|++..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 64 LSTKMFEHAKKFGAVYQYGDIKSVEDKGE--Y--KVINFGNKELTAKAVIIATGAE 115 (312)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCEEEECSS--C--EEEECSSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhhccccccceeeeeeeeeec--c--eeeccCCeEEEeceeEEcccCc
Confidence 55566666777788888887777766544 3 3355567899999999999964
No 205
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=83.89 E-value=1.8 Score=40.33 Aligned_cols=43 Identities=14% Similarity=0.141 Sum_probs=32.0
Q ss_pred cCCeEEcceeeeEEEecCCCC-eEEEEEEC----------------C--eEEecCEEEEeeCh
Q 019274 74 RGCEFLDGRRVTDFIYDEERC-CISDVVCG----------------K--ETYSAGAVVLAVGI 117 (343)
Q Consensus 74 ~G~~i~~~~~V~~I~~~~~~g-~v~~V~~~----------------g--~~~~ad~VV~a~p~ 117 (343)
+|++|++++.+.+|.-+++ + ++.+|++. | +++.+|.||++++.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 8899999999999986533 4 56555542 3 36788988888875
No 206
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=83.10 E-value=1 Score=43.47 Aligned_cols=53 Identities=15% Similarity=0.211 Sum_probs=40.3
Q ss_pred HHcCCeEEcceeeeEEEecCCCCeEEEEEEC---Ce--EEecC-EEEEeeChhhHHHhh
Q 019274 72 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSAG-AVVLAVGISTLQELI 124 (343)
Q Consensus 72 ~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~---g~--~~~ad-~VV~a~p~~~~~~Ll 124 (343)
++.+.+|++++.|++|..+++++++++|+.. |. ++.|+ .||++++.-...+||
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL 275 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLL 275 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHH
Confidence 3457899999999999998311789999873 43 56784 699999988776654
No 207
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=82.12 E-value=0.86 Score=43.82 Aligned_cols=53 Identities=21% Similarity=0.146 Sum_probs=40.6
Q ss_pred HHcCCeEEcceeeeEEEec----CCCCeEEEEEEC---C-e--EEec-CEEEEeeChhhHHHhhh
Q 019274 72 RTRGCEFLDGRRVTDFIYD----EERCCISDVVCG---K-E--TYSA-GAVVLAVGISTLQELIK 125 (343)
Q Consensus 72 ~~~G~~i~~~~~V~~I~~~----~~~g~v~~V~~~---g-~--~~~a-d~VV~a~p~~~~~~Ll~ 125 (343)
++.+.+|++++.|++|..+ ++ ++++||+.. | . ++.| +.||+++++-.+.+||.
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~-~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~ 282 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGL-PAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQ 282 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTE-EECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHH
T ss_pred cCCCeEEECCCEEEEEEeecCCCCC-CEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHH
Confidence 4568899999999999987 32 478888863 3 3 5678 57999999887776643
No 208
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=82.03 E-value=2.6 Score=36.80 Aligned_cols=54 Identities=20% Similarity=0.146 Sum_probs=41.4
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEec--CCCCeEEEEEE-CCeEEecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVC-GKETYSAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~--~~~g~v~~V~~-~g~~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+.+++.|++++. ++|++|..+ + +..+.|.+ +|+++++|+||+|++..
T Consensus 66 ~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~--~~~~~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 66 ELAQRMHQQAEKFGAKVEM-DEVQGVQHDATS--HPYPFTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCEEEEEECTTS--SSCCEEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEe-eeEEEEEeccCC--CceEEEEECCCCEEEeCEEEECcCCC
Confidence 4677788888889999988 689999877 4 32123444 46789999999999974
No 209
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=81.53 E-value=2.4 Score=37.28 Aligned_cols=53 Identities=19% Similarity=0.196 Sum_probs=41.2
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEE-EEC-CeEEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDV-VCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V-~~~-g~~~~ad~VV~a~p~~ 118 (343)
..+.+.+.+.+++.|+++++++ |.+|.. + +. +.| .++ ++++++|.||+|++..
T Consensus 71 ~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~-~~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 71 PELMDEMREQALRFGADLRMED-VESVSL-H--GP-LKSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEEC-S--SS-SEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEEee-EEEEEe-C--Cc-EEEEEeCCCCEEEeCEEEECCCCC
Confidence 3467778888888899999997 999887 3 33 345 565 5689999999999974
No 210
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=81.41 E-value=2.4 Score=36.22 Aligned_cols=53 Identities=21% Similarity=0.164 Sum_probs=40.1
Q ss_pred hhhHHHHHHHHHc-CCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~-G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+.+++. +.+++ +++|++|..++ +. +.|.+. ++++++|.||+|++..
T Consensus 57 ~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~--~~-~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 57 EIIAEARRQIERYPTIHWV-EGRVTDAKGSF--GE-FIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHTTCTTEEEE-ESCEEEEEEET--TE-EEEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC--Ce-EEEEECCCCEEEcCEEEECCCCC
Confidence 4677777777776 45554 56999998876 44 567775 5689999999999984
No 211
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=81.09 E-value=3 Score=39.77 Aligned_cols=56 Identities=13% Similarity=0.147 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE-C---C--eEEecCEEEEeeChhhH-HHhh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGISTL-QELI 124 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~-~---g--~~~~ad~VV~a~p~~~~-~~Ll 124 (343)
+.+.|.+.+++. |+++++|++|..++ +.|+ |++ + | .+++||.||.|.+..+. .+.+
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~--~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRD--DHVR-ATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECS--SCEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeC--CEEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 555666777665 99999999999877 4454 433 2 4 47899999999999874 3454
No 212
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=81.04 E-value=2.4 Score=43.48 Aligned_cols=49 Identities=22% Similarity=0.331 Sum_probs=37.8
Q ss_pred HHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC--------C--eEEecCEEEEeeCh
Q 019274 68 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--------K--ETYSAGAVVLAVGI 117 (343)
Q Consensus 68 ~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--------g--~~~~ad~VV~a~p~ 117 (343)
.+.+++.|++|++++.|++|..+++ +++.+|++. | +++++|.||++++.
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 5668889999999999999987412 555556542 3 47899999999985
No 213
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.83 E-value=2.2 Score=38.30 Aligned_cols=47 Identities=23% Similarity=0.195 Sum_probs=36.4
Q ss_pred HHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 67 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 67 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
..+.+++.|++++++++|+.|..+. .. |+.+++++++|++|+|++..
T Consensus 66 ~~~~~~~~~v~~~~g~~v~~id~~~--~~---V~~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 66 SLDWYRKRGIEIRLAEEAKLIDRGR--KV---VITEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp CHHHHHHHTEEEECSCCEEEEETTT--TE---EEESSCEEECSEEEECCCEE
T ss_pred CHHHHHhCCcEEEECCEEEEEECCC--CE---EEECCcEEECCEEEECCCCC
Confidence 3455677899999999999997654 33 33567789999999999963
No 214
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=80.66 E-value=1.6 Score=36.41 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=29.9
Q ss_pred CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHh
Q 019274 261 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~ 300 (343)
+.+||||.+||.. +.+ ....++.+|+.+|+.|++.+
T Consensus 196 t~~p~iya~G~~a--~~g--~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV--REG--DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT--SCC--CHHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc--cCc--cHHHHHHHHHHHHHHHHhhc
Confidence 5789999999997 333 55668899999999999875
No 215
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=80.38 E-value=1.6 Score=42.19 Aligned_cols=53 Identities=19% Similarity=0.201 Sum_probs=40.3
Q ss_pred HHcCCeEEcceeeeEEEecCCC--CeEEEEEE---CCe--EEec-CEEEEeeChhhHHHhh
Q 019274 72 RTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GKE--TYSA-GAVVLAVGISTLQELI 124 (343)
Q Consensus 72 ~~~G~~i~~~~~V~~I~~~~~~--g~v~~V~~---~g~--~~~a-d~VV~a~p~~~~~~Ll 124 (343)
++.+.+|++++.|++|..++++ +++++|+. +|+ ++.| +.||+|++.-...+||
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL 302 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLIL 302 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHH
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHH
Confidence 4568899999999999987421 37888875 354 5678 8999999997766654
No 216
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=79.92 E-value=5 Score=39.27 Aligned_cols=51 Identities=16% Similarity=0.192 Sum_probs=38.5
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECC--eEEecCEEEEeeChh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--ETYSAGAVVLAVGIS 118 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g--~~~~ad~VV~a~p~~ 118 (343)
....+.+.+++.|++++++++|++|. + +.+ .++.+| .++++|.||++++..
T Consensus 575 ~~~~~~~~l~~~GV~v~~~~~v~~i~--~--~~v-~~~~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 575 TGWIHRTTLLSRGVKMIPGVSYQKID--D--DGL-HVVINGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp THHHHHHHHHHTTCEEECSCEEEEEE--T--TEE-EEEETTEEEEECCSEEEECCCEE
T ss_pred cHHHHHHHHHhcCCEEEeCcEEEEEe--C--CeE-EEecCCeEEEEeCCEEEECCCcc
Confidence 34556777899999999999999986 3 223 233456 478999999999874
No 217
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=79.62 E-value=5.1 Score=37.85 Aligned_cols=58 Identities=19% Similarity=0.180 Sum_probs=41.2
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEecCC--CCeEEEEE--E-CC-e--EEecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEE--RCCISDVV--C-GK-E--TYSAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~--~g~v~~V~--~-~g-~--~~~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|++|++++.|++|...++ .+.+ .|+ . ++ + ++++|.||++++..
T Consensus 249 d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 249 DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE-EEEEEESSSSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE-EEEEEECCCcEEEEEECCEEEEecCCc
Confidence 455788888889999999999999988865331 0222 232 2 33 2 56899999999864
No 218
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=79.35 E-value=0.54 Score=42.78 Aligned_cols=44 Identities=20% Similarity=0.145 Sum_probs=35.2
Q ss_pred HHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeCh
Q 019274 71 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGI 117 (343)
Q Consensus 71 l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~ 117 (343)
+++.|++|+++++|..+..+++ + ..|+++ |+++++|.||+++|.
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~-~--~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTE-A--MTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETT-T--TEEEETTSCEEECSEEEECCCE
T ss_pred HHhcCcEEEeCceEEEEEeccc-c--eEEEcCCCcEEEeeEEEEecCc
Confidence 4578999999999999988763 3 346665 678999999998764
No 219
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=79.19 E-value=1.9 Score=37.93 Aligned_cols=45 Identities=18% Similarity=0.218 Sum_probs=32.8
Q ss_pred HHHHcCCeEEcceeeeEEEecCCCCeEEEEEE----CC--eEEecCEEEEeeCh
Q 019274 70 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGI 117 (343)
Q Consensus 70 ~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~----~g--~~~~ad~VV~a~p~ 117 (343)
.+++.|++++++++|++|..++ + +.+|++ +| .++++|.||++++.
T Consensus 200 ~~~~~gV~v~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 200 ARNNDKIRFLTNHTVVAVDGDT--T-VTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp HHHCTTEEEECSEEEEEEECSS--S-CCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred HhccCCcEEEeCceeEEEecCC--c-EeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 3466899999999999998654 2 334443 23 47899999998875
No 220
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=78.58 E-value=4.5 Score=39.42 Aligned_cols=84 Identities=14% Similarity=0.072 Sum_probs=47.2
Q ss_pred HHHHHHHhhhcccCCCCceeeeEEEecCCCc-ccc-CCCCCCCCCCCCC-CCCCeEEeeccccCCCCCccchHHHHHHHH
Q 019274 215 AKAVSYLSKCIKDFSTATVMDHKIRRFPKSL-THF-FPGSYKYMMRGFT-SFPNLFMAGDWITTRHGSWSQERSYVTGLE 291 (343)
Q Consensus 215 ~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~-~~~-~~g~~~~~p~~~~-~~~~L~laGd~~~~g~~~~~~ega~~Sg~~ 291 (343)
..++..+-+.+|+++.++++. ...++ +.| .|... .+..++ .++||||||+-..+ -+.+.|+.+|..
T Consensus 340 ~~~q~~~~~~ipGle~a~i~r-----~Gy~ieyd~i~p~~L--~~tle~k~~~gLf~AGqinGt----tGYeEAaaqGl~ 408 (651)
T 3ces_A 340 FDVQMQIVRSMQGMENAKIVR-----PGYAIEYDFFDPRDL--KPTLESKFIQGLFFAGQINGT----TGYEEAAAQGLL 408 (651)
T ss_dssp HHHHHHHHHTSTTCTTCCEEE-----CCEEEEEEEECGGGB--CTTSBBSSSBTEEECSGGGTC----CCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCccceEEEe-----ccceeccCccchhhc--CccccccCCCCeEEEEEecCC----cChHHHHHHHHH
Confidence 345556667779998655432 21110 001 11111 133333 58999999988643 245678888888
Q ss_pred HHHHHHHHhCCCCcccccc
Q 019274 292 AANRVVDYLGDGSFSKIIP 310 (343)
Q Consensus 292 aA~~il~~~~~~~~~~~~~ 310 (343)
|+........ ++...++|
T Consensus 409 AG~nAa~~~~-~~~~~~~~ 426 (651)
T 3ces_A 409 AGLNAARLSA-DKEGWAPA 426 (651)
T ss_dssp HHHHHHHHHT-TCCCCCCC
T ss_pred HHHHHHHHhc-CCCCCCCC
Confidence 8777665543 34455555
No 221
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=78.55 E-value=1.9 Score=40.66 Aligned_cols=50 Identities=18% Similarity=0.240 Sum_probs=40.5
Q ss_pred cCCeEEcceeeeEEEecCCCCeEEEEEEC--C--eEEecCEEEEeeChhhHHHhhh
Q 019274 74 RGCEFLDGRRVTDFIYDEERCCISDVVCG--K--ETYSAGAVVLAVGISTLQELIK 125 (343)
Q Consensus 74 ~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--g--~~~~ad~VV~a~p~~~~~~Ll~ 125 (343)
.+.+|.+++.|++|..++ +++++|... + .++.|+.||+++++-.+.+||-
T Consensus 224 ~nl~v~~~~~v~~i~~~~--~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl 277 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEG--NQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLM 277 (526)
T ss_dssp TTEEEECSCEEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CCeEEEeCCEEEEEEecC--CeEEEEEEEecCceEEEeecceEEcccccCCcchhh
Confidence 457999999999999988 788888764 3 3568999999999887777653
No 222
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=78.11 E-value=5.1 Score=38.88 Aligned_cols=85 Identities=14% Similarity=0.063 Sum_probs=46.6
Q ss_pred HHHHHHHhhhcccCCCCceeeeEEEecCCCcc-cc-CCCCCCCCCCCCC-CCCCeEEeeccccCCCCCccchHHHHHHHH
Q 019274 215 AKAVSYLSKCIKDFSTATVMDHKIRRFPKSLT-HF-FPGSYKYMMRGFT-SFPNLFMAGDWITTRHGSWSQERSYVTGLE 291 (343)
Q Consensus 215 ~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~-~~-~~g~~~~~p~~~~-~~~~L~laGd~~~~g~~~~~~ega~~Sg~~ 291 (343)
..+...+-+.+|+++.++++. ...++. -+ .|.. ..+..++ .++||||||+-..+ -+.+.|..+|..
T Consensus 345 ~~~Q~~~~~~ipGle~a~~~r-----~Gy~ieyd~i~p~~--l~~tLe~k~~~gLf~AGqinGt----~GyeEAaaqGl~ 413 (637)
T 2zxi_A 345 EEVQWEMYRSIPGLENVVLIR-----PAYAIEYDVVPPTE--LYPTLETKKIRGLFHAGNFNGT----TGYEEAAGQGIV 413 (637)
T ss_dssp HHHHHHHHTTSTTCTTCCEEE-----CCEEEEEEECCGGG--BCTTSBBSSSBTEEECGGGGTB----CSHHHHHHHHHH
T ss_pred HHHHHHHHhhCcCcccceEec-----cccccccceEchhh--cCccccccCCCCEEEeeecCCc----chHHHHHHHHHH
Confidence 345556667779997654432 211110 01 1111 1133334 58999999998643 244567778887
Q ss_pred HHHHHHHHhCCCCccccccc
Q 019274 292 AANRVVDYLGDGSFSKIIPV 311 (343)
Q Consensus 292 aA~~il~~~~~~~~~~~~~~ 311 (343)
|+-.....+. |+...++|+
T Consensus 414 AG~nAa~~~~-~~~~~~~~r 432 (637)
T 2zxi_A 414 AGINAALRAF-GKEPIYLRR 432 (637)
T ss_dssp HHHHHHHHHT-TCCCCCCCT
T ss_pred HHHHHHHHhc-CCCCCCCCh
Confidence 7766654443 355566654
No 223
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=78.05 E-value=3.4 Score=35.53 Aligned_cols=53 Identities=21% Similarity=0.210 Sum_probs=39.4
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEE--EEECCeEEecCEEEEeeCh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISD--VVCGKETYSAGAVVLAVGI 117 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~--V~~~g~~~~ad~VV~a~p~ 117 (343)
..+.+.+.+.+++.|.+++++ +|.++ .+++ .+-+. +.+++ ++.+|+||+|++.
T Consensus 62 ~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~-~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 62 ISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNS-DGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHTTTCCEEECC-CEEEE-EECT-TSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCC-CCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 357778888888899999999 89999 5541 12244 33335 8899999999987
No 224
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=77.83 E-value=2.7 Score=35.87 Aligned_cols=40 Identities=18% Similarity=0.045 Sum_probs=32.5
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
.++..+|+|.+||... .+ .....|+..|..||..|.+.+.
T Consensus 253 ~~t~~~~vya~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 253 KQTTARGIFACGDVAR--PA-GSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp CBCSSTTEEECSGGGC--TT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeecCC--ch-HHHHHHHHhHHHHHHHHHHHHh
Confidence 3467899999999865 24 4677899999999999988765
No 225
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=77.71 E-value=3 Score=36.10 Aligned_cols=51 Identities=6% Similarity=0.079 Sum_probs=38.7
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEee
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAV 115 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~ 115 (343)
.+.+.+.+.+++.|.+++.++ |+++..++ +++..|+++ |+++.+|.+|+++
T Consensus 181 ~~~~~~~~~l~~~g~~~~~~~-v~~~~~~~--~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 181 ELSQTIMDELSNKNIPVITES-IRTLQGEG--GYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp CCCHHHHHHHHTTTCCEECSC-EEEEESGG--GCCCEEEETTSCEECCCEEEECC
T ss_pred cchhhhhhhhhccceeEeeee-EEEeecCC--Ceeeeeeccccceeeecceeeee
Confidence 367788888999999998874 78887666 677778886 5677777766544
No 226
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=77.34 E-value=3.4 Score=37.98 Aligned_cols=46 Identities=24% Similarity=0.305 Sum_probs=36.9
Q ss_pred HHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 68 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 68 ~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
.+.+++.|++++++++|+.|..++ . .|+++ |+++++|.+|+|++..
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~~--~---~v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRDR--Q---QVILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETTT--T---EEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHhCCCEEEeCCEEEEEECCC--C---EEEECCCCEEECCEEEEcCCCC
Confidence 455678899999999999998765 4 35555 6689999999999974
No 227
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=77.13 E-value=2.6 Score=37.94 Aligned_cols=47 Identities=11% Similarity=-0.014 Sum_probs=37.0
Q ss_pred HcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhHH
Q 019274 73 TRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ 121 (343)
Q Consensus 73 ~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~~ 121 (343)
..+.+|+++++|+++...++ ++| .|++. |++++||.||-|=+..+..
T Consensus 121 ~~~~~v~~~~~v~~~~~~~~-~~v-~v~~~dG~~~~adlvVgADG~~S~v 168 (412)
T 4hb9_A 121 GLANTIQWNKTFVRYEHIEN-GGI-KIFFADGSHENVDVLVGADGSNSKV 168 (412)
T ss_dssp TCTTTEECSCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECCCTTCHH
T ss_pred hccceEEEEEEEEeeeEcCC-CeE-EEEECCCCEEEeeEEEECCCCCcch
Confidence 34678999999999987654 654 46665 7789999999999988753
No 228
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=75.61 E-value=2.4 Score=42.01 Aligned_cols=49 Identities=12% Similarity=0.079 Sum_probs=35.8
Q ss_pred HHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE---CC-eE------------------EecCEEEEeeChh
Q 019274 65 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ET------------------YSAGAVVLAVGIS 118 (343)
Q Consensus 65 ~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~---~g-~~------------------~~ad~VV~a~p~~ 118 (343)
..+.+.+++.|+++++++.|++|.-+ + +. +.. ++ ++ +.||.||++++..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~~---~-v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEPG---R-ME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEETT---E-EE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEECC---e-EE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 56777788999999999999999632 2 22 322 22 22 8999999999864
No 229
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=75.43 E-value=3.4 Score=35.68 Aligned_cols=53 Identities=8% Similarity=0.159 Sum_probs=37.7
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+.+++.+.++..++ |..+....+ . ..+.++ +.++++|+||+|++..
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~-~--~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITET-IDHVDFSTQ-P--FKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSS-S--EEEEETTCCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhhcCcEEEEeE-EEEeecCCC-c--eEEEECCCeEEEEeEEEEccccc
Confidence 467778888888888887764 555555542 3 234444 6789999999999963
No 230
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=74.98 E-value=7.9 Score=39.99 Aligned_cols=49 Identities=22% Similarity=0.186 Sum_probs=37.8
Q ss_pred HHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC--------------C--eEEecCEEEEeeCh
Q 019274 67 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--------------K--ETYSAGAVVLAVGI 117 (343)
Q Consensus 67 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--------------g--~~~~ad~VV~a~p~ 117 (343)
..+.+++.|+++++++.+.+|..++ ++|.+|++. | .++.||.||+|++.
T Consensus 376 e~~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 376 EVELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 3456778899999999999998655 777666541 2 26899999999976
No 231
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=74.98 E-value=4.7 Score=36.25 Aligned_cols=46 Identities=22% Similarity=0.137 Sum_probs=36.7
Q ss_pred HHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 68 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 68 ~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
.+.+++.|++++++++|+.|..++ .. |.++++++++|++|+|++..
T Consensus 67 ~~~~~~~~v~~~~~~~v~~i~~~~--~~---v~~~~~~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 67 GAMAEQLNARILTHTRVTGIDPGH--QR---IWIGEEEVRYRDLVLAWGAE 112 (384)
T ss_dssp HHHHHHTTCEEECSCCCCEEEGGG--TE---EEETTEEEECSEEEECCCEE
T ss_pred HHHHHhCCcEEEeCCEEEEEECCC--CE---EEECCcEEECCEEEEeCCCC
Confidence 445577899999999999998765 33 55666789999999999974
No 232
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=74.05 E-value=4.7 Score=31.66 Aligned_cols=40 Identities=25% Similarity=0.114 Sum_probs=30.7
Q ss_pred CCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 260 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 260 ~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
++..+++|.+||...... .....|+..|..||..|...+.
T Consensus 132 ~t~~~~i~a~GD~~~~~~--~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 132 RTSYPRVYAAGVARGKVP--GHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp BCSSTTEEECGGGGTCCS--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCEEEeecccCcch--hhHHHHHHhHHHHHHHHHHHhh
Confidence 457899999999975322 2456688999999999988754
No 233
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=73.20 E-value=5.1 Score=34.57 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
+.+.+.+.+.+.+...+.+..|..+...++ +. ..|.+. ++++++|+||+|++..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 62 FKEIGLNEVMKYPSVHYYEKTVVMITKQST-GL-FEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp HHHHHHHHHTTSTTEEEEECCEEEEEECTT-SC-EEEEETTCCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHhcCCEEEEeeEEEEeeecCC-Cc-EEEEECCCCEEEeCEEEEccCCc
Confidence 455555566666766666667777766553 43 346665 6799999999999964
No 234
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=73.01 E-value=4.6 Score=36.76 Aligned_cols=45 Identities=27% Similarity=0.287 Sum_probs=36.0
Q ss_pred HHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 69 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 69 ~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
+.+++.|.+++++++|+.|..+. . .|.+. ++++.+|++|+|++..
T Consensus 65 ~~~~~~~i~~~~~~~v~~id~~~--~---~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 65 DWYGEARIDMLTGPEVTALDVQT--R---TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp THHHHTTCEEEESCCEEEEETTT--T---EEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEeCCEEEEEECCC--C---EEEECCCCEEECCEEEEccCCc
Confidence 44667899999999999998765 3 35555 6789999999999964
No 235
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=72.95 E-value=4.8 Score=35.23 Aligned_cols=41 Identities=20% Similarity=0.283 Sum_probs=31.9
Q ss_pred CCCCCCCeEEee--ccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 259 GFTSFPNLFMAG--DWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 259 ~~~~~~~L~laG--d~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
..+..+|+|.+| |.+.+ .+ ..+.+|...|..+|+.|.+.+.
T Consensus 310 ~~t~~~~vya~Gd~d~~~~-~~-~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGM-AS-ATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp BBSSCTTEEECSSCGGGST-TC-SSTTTHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCeEEecccccccc-ch-hhhhhhHHHHHHHHHHHHHHHH
Confidence 456789999999 55432 23 4667799999999999998875
No 236
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=72.17 E-value=10 Score=36.35 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=40.3
Q ss_pred chhhhHHHHHHHHHcCCeEEcceeeeEEEec------C-CCCeEE-EEEE-CCeEE--ecCEEEEeeChh
Q 019274 60 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD------E-ERCCIS-DVVC-GKETY--SAGAVVLAVGIS 118 (343)
Q Consensus 60 ~~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~------~-~~g~v~-~V~~-~g~~~--~ad~VV~a~p~~ 118 (343)
...+.+.+.+.+++.|+++++++.|++|... + +.+++. .+.. +|+++ ++|.||++++..
T Consensus 325 d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 325 DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCc
Confidence 3457778888899999999999998888532 1 113332 1222 45555 499999999864
No 237
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=71.36 E-value=5.1 Score=37.67 Aligned_cols=56 Identities=14% Similarity=0.010 Sum_probs=41.2
Q ss_pred hhhHHHHHHHHHcCCeEEcceeeeEEEecCCCC-----eEEEEEEC----C--eEEecCEEEEeeCh
Q 019274 62 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC-----CISDVVCG----K--ETYSAGAVVLAVGI 117 (343)
Q Consensus 62 ~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g-----~v~~V~~~----g--~~~~ad~VV~a~p~ 117 (343)
.+.+.|...+++.+..|+++++|++|...++++ ..+.|++. | +++.|+.||+|++.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 367777777777788899999999998754211 23566653 2 36899999999984
No 238
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=71.15 E-value=5.8 Score=36.75 Aligned_cols=53 Identities=17% Similarity=0.191 Sum_probs=37.4
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC---Ce--EEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~---g~--~~~ad~VV~a~p~~ 118 (343)
..+.+.+.+.++ ++|+++++|++|..+++ +++ .|++. |+ ++++|.||++++..
T Consensus 214 ~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~-~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 214 QDIVNTLLSILK---LNIKFNSPVTEVKKIKD-DEY-EVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHHHHC---CCEECSCCEEEEEEEET-TEE-EEEECCTTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHHHhcCE---EEEEECCEEEEEEEcCC-CcE-EEEEEecCCceEEEEcCEEEECcCCC
Confidence 335555555553 99999999999987652 334 35553 44 78999999999864
No 239
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=70.77 E-value=6 Score=35.80 Aligned_cols=40 Identities=23% Similarity=0.227 Sum_probs=32.5
Q ss_pred CCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCC
Q 019274 262 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 262 ~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
..+|+|.+||.+..+.+ .....|...|..||+.|.+.++.
T Consensus 298 ~~~~vfa~GD~~~~~~~-~~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVP-KLGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp SCTTEEECGGGBTTCCS-CCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEeehhccCCCC-cHHHHHHHHHHHHHHHHHHHhcC
Confidence 68999999999864344 35567889999999999999854
No 240
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=69.73 E-value=5.5 Score=37.89 Aligned_cols=50 Identities=12% Similarity=-0.099 Sum_probs=36.6
Q ss_pred HHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE-C-C--eEEecCEEEEeeCh
Q 019274 65 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-K--ETYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~-~-g--~~~~ad~VV~a~p~ 117 (343)
+.+....++.|.+++++++|++|..++ +.+ .+.. . + .++.+|+||+|++.
T Consensus 62 ~~~~~~~~~~~i~~~~~~~V~~id~~~--~~v-~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 62 QTPESFKARFNVEVRVKHEVVAIDRAA--KLV-TVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp CCHHHHHHHHCCEEETTEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECCC--CEE-EEEecCCCCeEEEECCEEEECCCC
Confidence 334444555799999999999998776 543 3443 1 3 37899999999987
No 241
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=69.59 E-value=7.1 Score=35.91 Aligned_cols=47 Identities=13% Similarity=0.049 Sum_probs=35.0
Q ss_pred HHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC--C--eEEecCEEEEeeChh
Q 019274 69 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--K--ETYSAGAVVLAVGIS 118 (343)
Q Consensus 69 ~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--g--~~~~ad~VV~a~p~~ 118 (343)
+.+++.|.+++++++|++|..+. ..+ .+... + .++.+|++|+|++..
T Consensus 65 ~~~~~~~i~~~~~~~V~~id~~~--~~~-~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 65 KFYDRKQITVKTYHEVIAINDER--QTV-SVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHHHCCEEEETEEEEEEETTT--TEE-EEEETTTTEEEEEECSEEEECCCEE
T ss_pred HHHHhcCCEEEeCCeEEEEEccC--cEE-EEEeccCCceEEEEcCEEEECCCCc
Confidence 44567799999999999998765 433 33332 2 367899999999974
No 242
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=69.57 E-value=5.8 Score=38.02 Aligned_cols=52 Identities=12% Similarity=0.069 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEeeCh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 117 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~g~--~~~ad~VV~a~p~ 117 (343)
+.+.+....++.|.+++++++|++|..++ +.+ .+.. +++ ++.+|++|+|++.
T Consensus 95 ~~~~~~~~~~~~gi~v~~~~~V~~id~~~--~~v-~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 95 LVQTVERMSKRFNLDIRVLSEVVKINKEE--KTI-TIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp BSSCHHHHHHHTTCEEECSEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC--CEE-EEeecCCCCEEEEeCCEEEECCCC
Confidence 44556666678899999999999998876 544 3443 344 6899999999986
No 243
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=69.03 E-value=4.6 Score=37.49 Aligned_cols=50 Identities=18% Similarity=0.042 Sum_probs=35.1
Q ss_pred HHHHHHHHH------cCCeEEcceeeeEEEecCCCCeEEEEEE-----------------CC--eEEecCEEEEeeCh
Q 019274 65 EPWMDSMRT------RGCEFLDGRRVTDFIYDEERCCISDVVC-----------------GK--ETYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~~~l~~------~G~~i~~~~~V~~I~~~~~~g~v~~V~~-----------------~g--~~~~ad~VV~a~p~ 117 (343)
+.|.+.+++ +|++|++++.|.+|.-+ +++.+|++ +| +++.||.||++++.
T Consensus 250 ~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 250 KVLRGYADREPRPGHRRMVFRFLTSPIEIKGK---RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp HHHHHHHTCC-CTTSEEEEEECSEEEEEEECS---SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHhhcCCCCCCceEEEEeCCCCeEEecC---CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 445555555 79999999999999743 34444443 23 35789999999885
No 244
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=68.87 E-value=2.9 Score=38.93 Aligned_cols=38 Identities=24% Similarity=0.293 Sum_probs=26.6
Q ss_pred CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 261 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
|..+|+|.+||-.. + + ..+..|+..|+.||..|...+.
T Consensus 407 Ts~~~VfA~GD~~~-g-~-~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 407 TNMDGVFAAGDIVR-G-A-SLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp CSSTTEEECGGGGS-S-C-CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccccC-C-c-hHHHHHHHHHHHHHHHHHHHhh
Confidence 34578888888754 2 3 3566778888888888877664
No 245
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=68.50 E-value=7 Score=36.52 Aligned_cols=49 Identities=12% Similarity=0.203 Sum_probs=36.9
Q ss_pred HHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC--CeEEecCEEEEeeChh
Q 019274 67 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGIS 118 (343)
Q Consensus 67 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--g~~~~ad~VV~a~p~~ 118 (343)
+.+.+++.|++++++++|+.|..++ +.+ .+..+ +.++++|++|+|++..
T Consensus 98 ~~~~~~~~gv~v~~~~~v~~i~~~~--~~v-~v~~~g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 98 DKEELESLGAKVYMESPVQSIDYDA--KTV-TALVDGKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp CHHHHHHTTCEEETTCCEEEEETTT--TEE-EEEETTEEEEEECSEEEECCCEE
T ss_pred CHHHHHhCCCEEEeCCEEEEEECCC--CEE-EEEeCCcEEEEECCEEEECCCCC
Confidence 3455677899999999999998766 543 34323 3478999999999964
No 246
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=67.37 E-value=12 Score=34.42 Aligned_cols=50 Identities=16% Similarity=0.193 Sum_probs=37.0
Q ss_pred HHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEeeChh
Q 019274 66 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 118 (343)
Q Consensus 66 ~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~g~--~~~ad~VV~a~p~~ 118 (343)
.+.+.+++.|+++++++.|++|..++ +.| .+.. +|+ ++++|++|+|++..
T Consensus 61 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v-~~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 61 MTGEKMESRGVNVFSNTEITAIQPKE--HQV-TVKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp CCHHHHHHTTCEEEETEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCEE
T ss_pred CCHHHHHHCCCEEEECCEEEEEeCCC--CEE-EEEecCCCceEEEeCCEEEEcCCCC
Confidence 34455677899999999999998766 544 3444 243 48999999999864
No 247
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=67.03 E-value=8.8 Score=35.30 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=37.3
Q ss_pred HHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE--C--CeEEecCEEEEeeChh
Q 019274 66 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIS 118 (343)
Q Consensus 66 ~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~--g~~~~ad~VV~a~p~~ 118 (343)
.+.+.+++.|++++++++|+.|..++ +.+ .+.. + +.++++|++|+|++..
T Consensus 63 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v-~v~~~~~g~~~~~~~d~lviAtGs~ 116 (452)
T 2cdu_A 63 SSPEELSNLGANVQMRHQVTNVDPET--KTI-KVKDLITNEEKTEAYDKLIMTTGSK 116 (452)
T ss_dssp CCHHHHHHTTCEEEESEEEEEEEGGG--TEE-EEEETTTCCEEEEECSEEEECCCEE
T ss_pred cCHHHHHHcCCEEEeCCEEEEEEcCC--CEE-EEEecCCCceEEEECCEEEEccCCC
Confidence 33455677899999999999998766 543 3443 1 3578999999999963
No 248
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=66.69 E-value=5.5 Score=36.49 Aligned_cols=46 Identities=15% Similarity=0.149 Sum_probs=35.3
Q ss_pred HHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 67 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 67 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
+.+.+++.|++++.+ +|++|..++ .+ |+++ |+++++|++|+|+++.
T Consensus 62 ~~~~~~~~gv~~i~~-~v~~Id~~~--~~---V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 62 LAPLLPKFNIEFINE-KAESIDPDA--NT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp STTTGGGGTEEEECS-CEEEEETTT--TE---EEETTCCEEECSEEEECCCCE
T ss_pred HHHHHHHCCcEEEEe-EEEEEECCC--CE---EEECCCCEEECCEEEEeCCCC
Confidence 344566779999877 799998765 43 5666 6789999999999975
No 249
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=66.58 E-value=5.6 Score=36.17 Aligned_cols=50 Identities=18% Similarity=0.110 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeCh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGI 117 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~ 117 (343)
+.....+.+++.|.+++++++|++|..++ . .|.++ ++++.+|++|+|++.
T Consensus 67 ~~~~~~~~~~~~~i~~~~~~~v~~id~~~--~---~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 67 ICIRPAQFWEDKAVEMKLGAEVVSLDPAA--H---TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp GBSSCHHHHHHTTEEEEETCCEEEEETTT--T---EEEETTSCEEEEEEEEECCCE
T ss_pred hccCCHHHHHHCCcEEEeCCEEEEEECCC--C---EEEECCCCEEEeeEEEEccCC
Confidence 33344566778899999999999998765 3 35555 678999999999985
No 250
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=65.77 E-value=4.1 Score=37.10 Aligned_cols=43 Identities=28% Similarity=0.329 Sum_probs=34.2
Q ss_pred HHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 71 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 71 l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
+++.|++++++++|+.|..++ . .|+++ ++++++|++|+|++..
T Consensus 69 ~~~~~v~~~~~~~v~~i~~~~--~---~v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 69 KRAPEVEWLLGVTAQSFDPQA--H---TVALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp TTSCSCEEEETCCEEEEETTT--T---EEEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEcCCEEEEEECCC--C---EEEECCCCEEECCEEEECCCCC
Confidence 456789999999999998654 3 35554 6689999999999973
No 251
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=65.22 E-value=3.2 Score=38.05 Aligned_cols=77 Identities=16% Similarity=-0.004 Sum_probs=41.2
Q ss_pred HHHHHHHhhhcccCCCCceeeeEE-EecCCCccccCCCCCCCCCCCCC-CCCCeEEeeccccCCCCCccchHHHHHHHHH
Q 019274 215 AKAVSYLSKCIKDFSTATVMDHKI-RRFPKSLTHFFPGSYKYMMRGFT-SFPNLFMAGDWITTRHGSWSQERSYVTGLEA 292 (343)
Q Consensus 215 ~~~~~~L~~~~p~~~~~~~~~~~~-~r~~~~~~~~~~g~~~~~p~~~~-~~~~L~laGd~~~~g~~~~~~ega~~Sg~~a 292 (343)
..+...+-+++|+++.++++..-+ ++. .+...|... .+..++ .++||||||+-+.. - +.+.|..+|..|
T Consensus 283 ~~~Q~~~~r~IpGLE~a~~~r~G~~~ey---~~i~sP~~L--~~tle~k~~~~Lf~AGqi~G~--~--Gy~eAaa~Gl~A 353 (443)
T 3g5s_A 283 WPEQKRLIQMIPGLENAEIVRYGVMHRN---TYLNAPRLL--GETLEFREAEGLYAAGVLAGV--E--GYLESAATGFLA 353 (443)
T ss_dssp HHHHHHHHTTSTTCTTCCEEECCEEEEE---EEECHHHHB--CTTSEETTEEEEEECGGGGTB--C--SHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcChhhCeeeeCcEeecC---ceecChhHh--ChhceecCCCCEEECcccccc--H--HHHHHHHhHHHH
Confidence 455566778899998655432111 000 000011111 122333 58999999999643 2 445667777777
Q ss_pred HHHHHHHh
Q 019274 293 ANRVVDYL 300 (343)
Q Consensus 293 A~~il~~~ 300 (343)
+..+...+
T Consensus 354 G~naa~~~ 361 (443)
T 3g5s_A 354 GLNAARKA 361 (443)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 65554443
No 252
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=65.01 E-value=9.4 Score=35.12 Aligned_cols=48 Identities=21% Similarity=0.244 Sum_probs=36.8
Q ss_pred HHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC--CeEEecCEEEEeeCh
Q 019274 67 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGI 117 (343)
Q Consensus 67 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~--g~~~~ad~VV~a~p~ 117 (343)
+.+.+++.|.+++++++|++|..++ +.+ .+... +.++++|++|+|++.
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~--~~v-~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVEN--QLI-AWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTT--TEE-EEEETTEEEEEECSEEEECCCC
T ss_pred CHHHHHHCCCEEEECCEEEEEECCC--CEE-EEEecCceEEEEcCEEEECCCc
Confidence 3455677899999999999998876 443 34323 457899999999987
No 253
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=63.33 E-value=5.4 Score=37.93 Aligned_cols=43 Identities=28% Similarity=0.289 Sum_probs=30.6
Q ss_pred CCCCCCCeEEeeccccCC-C-----CCccchHHHHHHHHHHHHHHHHhC
Q 019274 259 GFTSFPNLFMAGDWITTR-H-----GSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g-~-----~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
.+++++|||.||+...+| | ++.++-.|+..|+.|++.+.+...
T Consensus 363 ~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~ 411 (540)
T 1chu_A 363 GRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMP 411 (540)
T ss_dssp CBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 347899999999986322 2 123456688899999999877643
No 254
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=62.98 E-value=8.9 Score=35.10 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
+...+.+.+++.|++++. .+|++|..++ . .|+++ ++++.+|++|+|++...
T Consensus 61 ~~~~l~~~~~~~gv~~~~-~~v~~id~~~--~---~V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 61 IAFPIRHYVERKGIHFIA-QSAEQIDAEA--Q---NITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp HEEECHHHHHTTTCEEEC-SCEEEEETTT--T---EEEETTSCEEECSEEEECCCCEE
T ss_pred HHHHHHHHHHHCCCEEEE-eEEEEEEcCC--C---EEEECCCCEEECCEEEECCCCCc
Confidence 444456777788999985 5999998665 4 35565 56799999999999744
No 255
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=62.90 E-value=6.6 Score=36.16 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=29.1
Q ss_pred CCCCeEEeeccccC-CC-CCccchHHHHHHHHHHHHHHHHh
Q 019274 262 SFPNLFMAGDWITT-RH-GSWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 262 ~~~~L~laGd~~~~-g~-~~~~~ega~~Sg~~aA~~il~~~ 300 (343)
++||||+||.-+.. |+ |+-.+..|+.+|+.|++.+.+..
T Consensus 403 ~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 403 FTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENA 443 (447)
T ss_dssp SSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 69999999987752 21 11346778999999999987654
No 256
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=61.73 E-value=9.6 Score=35.43 Aligned_cols=48 Identities=15% Similarity=0.208 Sum_probs=35.5
Q ss_pred HHHH-HHcCCeEEcceeeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEeeChh
Q 019274 68 MDSM-RTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 118 (343)
Q Consensus 68 ~~~l-~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~g~--~~~ad~VV~a~p~~ 118 (343)
.+.+ +..|+++++++.|+.|..++ +.+ .+.. +|+ ++++|++|+|++..
T Consensus 99 ~~~~~~~~gv~~~~~~~v~~i~~~~--~~v-~v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 99 VKTFRDKYGIDAKVRHEVTKVDTEK--KIV-YAEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp HHHHHHTTCCEEESSEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHhhcCCEEEeCCEEEEEECCC--CEE-EEEEcCCCceEEEEcCEEEECCCCc
Confidence 3445 34499999999999998766 544 3554 254 68999999999964
No 257
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=61.06 E-value=11 Score=34.91 Aligned_cols=44 Identities=20% Similarity=0.190 Sum_probs=31.2
Q ss_pred HHcCCeEEcceeeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEeeChh
Q 019274 72 RTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 118 (343)
Q Consensus 72 ~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~--~g~--~~~ad~VV~a~p~~ 118 (343)
+..|.+++++++|++|..++ +.+ .+.. +|+ ++.+|++|+|++..
T Consensus 77 ~~~gi~~~~~~~V~~id~~~--~~v-~~~~~~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRAA--HTV-EIENLRTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ----CEEECSEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCEE
T ss_pred hhcCcEEEECCEEEEEECCC--CEE-EEeecCCCCEEEEECCEEEEeCCCC
Confidence 35789999999999998776 543 3444 243 78999999999863
No 258
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=60.73 E-value=15 Score=31.33 Aligned_cols=40 Identities=23% Similarity=0.107 Sum_probs=29.3
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHh
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~ 300 (343)
.+|.+||+|.|||-+.. +.....-|+..|..||..+.+.+
T Consensus 272 ~~Ts~pgIyA~GDv~~~--~~~~~~~A~~~G~~AA~~~~~yL 311 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDR--VYRQAIVAAGSGCMAALSCEKWL 311 (314)
T ss_dssp TBCSSTTEEECSTTTCS--SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCC--cchHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999998642 21234457778999999887765
No 259
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=60.01 E-value=9.7 Score=35.29 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=32.5
Q ss_pred hhhhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 61 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 61 ~~l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
..+++...+.+++.|+++++++.|.. . |.+++..+.+|+||+|++..
T Consensus 172 ~~~~~~~~~~l~~~gv~~~~~~~v~~-------~----v~~~~~~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 172 KSVVERRVKLLADAGVIYHPNFEVGR-------D----ASLPELRRKHVAVLVATGVY 218 (456)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCBTT-------T----BCHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHCCcEEEeCCEecc-------E----EEhhHhHhhCCEEEEecCCC
Confidence 34666777788899999999988731 1 11111135699999999974
No 260
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.32 E-value=17 Score=33.34 Aligned_cols=50 Identities=20% Similarity=0.266 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C-eEEecCEEEEeeChh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGIS 118 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g-~~~~ad~VV~a~p~~ 118 (343)
+.+.+.+.+++.|++++.++.+. .++ +. +.|.+. | .++++|++|+|++..
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~---id~--~~-v~V~~~~G~~~i~~d~lViATGs~ 144 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF---VDA--NT-VRVVNGDSAQTYTFKNAIIATGSR 144 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE---EET--TE-EEEEETTEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE---ccC--Ce-EEEEeCCCcEEEEeCEEEEecCCC
Confidence 34445667778899999998764 344 44 346665 4 578999999999974
No 261
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=58.66 E-value=10 Score=34.75 Aligned_cols=42 Identities=21% Similarity=0.209 Sum_probs=32.5
Q ss_pred HHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C-eEEecCEEEEeeChh
Q 019274 72 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGIS 118 (343)
Q Consensus 72 ~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g-~~~~ad~VV~a~p~~ 118 (343)
++.|.+++++++|++|..++ +.|.++ + .++.+|++|+|++..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~-----~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGY-----VRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp HHTTCEEETTCEEEEECSSE-----EEEECSSSEEEEECSEEEECCCEE
T ss_pred HhcCcEEEecCEEEEEecCC-----CEEEECCceEEEEcCEEEECCCCC
Confidence 67899999999999986432 235555 4 378999999999863
No 262
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=57.80 E-value=8.1 Score=34.13 Aligned_cols=40 Identities=15% Similarity=0.239 Sum_probs=28.8
Q ss_pred CCCCeEEeeccccC--CCC-C-ccchHHHHHHHHHHHHHHHHhC
Q 019274 262 SFPNLFMAGDWITT--RHG-S-WSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 262 ~~~~L~laGd~~~~--g~~-~-~~~ega~~Sg~~aA~~il~~~~ 301 (343)
-+||||++|..... |.+ + ..+-+.+.||+.||+.|++++.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 47999999977631 221 1 2455667899999999998863
No 263
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=56.17 E-value=8.8 Score=36.49 Aligned_cols=46 Identities=9% Similarity=0.306 Sum_probs=34.2
Q ss_pred HHHHHHHcCCeEEc--ceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 67 WMDSMRTRGCEFLD--GRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 67 l~~~l~~~G~~i~~--~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
+.+.+++.++++.. +++|++|.- . +|+++ | ++++|.||+|++....
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it~----~---gv~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVTP----E---GIKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEET----T---EEEESSC-EEECSEEEECCCCBSS
T ss_pred HHHHhcCCCEEEEecCCCCceEEcc----C---eEEeCCC-eeecCEEEECCccccc
Confidence 34456666888886 789999852 2 35565 6 9999999999998753
No 264
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=56.11 E-value=18 Score=33.27 Aligned_cols=51 Identities=18% Similarity=0.034 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C--eEEecCEEEEeeChhh
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K--ETYSAGAVVLAVGIST 119 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g--~~~~ad~VV~a~p~~~ 119 (343)
+.+.+.+.+++.|++++.++.+. .++ +. +.|.+. | .++++|+||+|++...
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~--~~-v~V~~~~G~~~~~~~d~lViAtG~~~ 146 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADA--NT-LLVDLNDGGTESVTFDNAIIATGSST 146 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSS--SE-EEEEETTSCCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecC--Ce-EEEEeCCCceEEEEcCEEEECCCCCC
Confidence 34445667778899999998754 344 44 346554 5 5789999999999743
No 265
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=55.92 E-value=17 Score=32.67 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=36.8
Q ss_pred HHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeCh
Q 019274 65 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGI 117 (343)
Q Consensus 65 ~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~ 117 (343)
....+.+++.|.++++ ++|++|..++ .. |.++ ++++.+|++|+|++.
T Consensus 61 ~~~~~~~~~~~i~~~~-~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 61 FRPEKFFQDQAIELIS-DRMVSIDREG--RK---LLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp SSCHHHHHHTTEEEEC-CCEEEEETTT--TE---EEESSSCEEECSEEEECCCE
T ss_pred CCCHHHHHhCCCEEEE-EEEEEEECCC--CE---EEECCCCEEECCEEEEeeCC
Confidence 3445667788999999 9999998765 42 5555 678999999999986
No 266
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=54.60 E-value=8.6 Score=35.95 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=33.0
Q ss_pred HcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 73 TRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 73 ~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
+.|++++++++|++|..++ .. |.++ |+++.+|++|+|++..
T Consensus 102 ~~gv~~~~g~~v~~id~~~--~~---V~~~~g~~i~yd~lviATGs~ 143 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD--NM---VKLNDGSQITYEKCLIATGGT 143 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG--TE---EEETTSCEEEEEEEEECCCEE
T ss_pred cCCeEEEcCCEEEEEECCC--CE---EEECCCCEEECCEEEECCCCC
Confidence 4688999999999998765 43 5554 6789999999999864
No 267
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=54.30 E-value=8.1 Score=35.08 Aligned_cols=36 Identities=8% Similarity=0.235 Sum_probs=26.7
Q ss_pred CCCCeEEeeccccC-CCCC-ccchHHHHHHHHHHHHHH
Q 019274 262 SFPNLFMAGDWITT-RHGS-WSQERSYVTGLEAANRVV 297 (343)
Q Consensus 262 ~~~~L~laGd~~~~-g~~~-~~~ega~~Sg~~aA~~il 297 (343)
.+|||||||+-+.. |+-+ =.+..|..||..|++.+.
T Consensus 362 ~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 362 QVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 68999999997752 2221 246779999999998874
No 268
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=54.22 E-value=5.2 Score=36.64 Aligned_cols=34 Identities=18% Similarity=0.540 Sum_probs=22.9
Q ss_pred CCCCeEEeeccccC-CC-CCccchHHHHHHHHHHHH
Q 019274 262 SFPNLFMAGDWITT-RH-GSWSQERSYVTGLEAANR 295 (343)
Q Consensus 262 ~~~~L~laGd~~~~-g~-~~~~~ega~~Sg~~aA~~ 295 (343)
.+|||||||+-+.- |+ |+=.+..|..||..|++.
T Consensus 381 ~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 381 EVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 58999999954431 11 112467899999988764
No 269
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=54.02 E-value=13 Score=34.47 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=30.8
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||.+. +.+ .....|...|+.||+.|+..
T Consensus 314 ~~t~~~~IyA~GD~~~-~~~-~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 314 EATNVANIYAVGDIIY-GKP-ELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp CBCSSTTEEECSTTBT-TSC-CCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEEEcccC-CCC-ccHHHHHHHHHHHHHHHcCC
Confidence 3467899999999974 334 35677899999999999864
No 270
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=53.33 E-value=14 Score=34.30 Aligned_cols=39 Identities=21% Similarity=0.199 Sum_probs=30.6
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++.++|+|.+||.+. +.+ .....|...|+.||+.|+..
T Consensus 314 ~~t~~~~IyA~GD~~~-~~~-~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 314 EATSVPHIYAIGDVAE-GRP-ELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp SBCSSTTEEECGGGBT-TCC-CCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEeEEecC-CCC-cchhHHHHHHHHHHHHHcCC
Confidence 3467899999999974 334 35667889999999999864
No 271
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=52.72 E-value=11 Score=36.32 Aligned_cols=42 Identities=26% Similarity=0.242 Sum_probs=30.2
Q ss_pred CCCCCCCeEEeeccccC-CCC-----CccchHHHHHHHHHHHHHHHHh
Q 019274 259 GFTSFPNLFMAGDWITT-RHG-----SWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~-g~~-----~~~~ega~~Sg~~aA~~il~~~ 300 (343)
.++++||||-||+...+ -|+ +.++-.|+..|+.|++.+.+..
T Consensus 368 ~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 368 CETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp SBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 44689999999997532 222 1345668889999999987765
No 272
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=52.67 E-value=8 Score=34.44 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=29.4
Q ss_pred CCCeEEeeccccC--CCC-C-ccchHHHHHHHHHHHHHHHHhCC
Q 019274 263 FPNLFMAGDWITT--RHG-S-WSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 263 ~~~L~laGd~~~~--g~~-~-~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
+||||.+|-.... |.| + ...-+.+.||+.||+.|+++++.
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~ 336 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDL 336 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHh
Confidence 6899999977641 222 1 34556678999999999998864
No 273
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=52.25 E-value=13 Score=36.16 Aligned_cols=45 Identities=27% Similarity=0.231 Sum_probs=31.0
Q ss_pred CCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCCCCccccccc
Q 019274 262 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIPV 311 (343)
Q Consensus 262 ~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~~~~~~~~~~ 311 (343)
.++||||||+-..+ .+.+.|+.+|..|+..+...+. |+...++|+
T Consensus 377 ~~~gLf~AGqi~g~----~Gy~eA~a~G~~AG~naa~~~~-~~~~~~~~r 421 (641)
T 3cp8_A 377 PVENLFFAGQINGT----SGYEEAAAQGLMAGINAVRKIL-GKELIVLGR 421 (641)
T ss_dssp SSBTEEECSGGGTB----CCHHHHHHHHHHHHHHHHHHHH-TCCCCCCCT
T ss_pred CcCCEEEEEeecCC----ccHHHHHHHHHHHHHHHHHHhc-CCCCCCCCh
Confidence 58999999998653 2456788888888877765543 344555553
No 274
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=51.58 E-value=17 Score=32.59 Aligned_cols=43 Identities=19% Similarity=0.252 Sum_probs=32.7
Q ss_pred HHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhh
Q 019274 71 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 119 (343)
Q Consensus 71 l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~ 119 (343)
+.++|++++.+ .|++|..++ .. |+++ |.++.+|++|+|++...
T Consensus 65 ~~~~gv~~i~~-~v~~id~~~--~~---v~~~~g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 65 LRAHGIQVVHD-SALGIDPDK--KL---VKTAGGAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp HHHTTCEEECS-CEEEEETTT--TE---EEETTSCEEECSEEEECCCEEE
T ss_pred HHHCCCEEEEe-EEEEEEccC--cE---EEecccceeecceeeeccCCcc
Confidence 45679998776 788887765 42 4555 67899999999999753
No 275
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=50.99 E-value=16 Score=34.33 Aligned_cols=39 Identities=18% Similarity=0.148 Sum_probs=30.5
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.+|.++|+|.+||.+. +.+ .....|...|+.||+.|+..
T Consensus 342 ~~Ts~~~IyA~GD~~~-g~~-~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 342 EQTNVPYIYAIGDILE-DKV-ELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp SBCSSTTEEECGGGBS-SSC-CCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEEEeccC-CCC-ccHHHHHHHHHHHHHHHcCC
Confidence 3467899999999974 334 35677889999999999854
No 276
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=50.80 E-value=20 Score=32.54 Aligned_cols=48 Identities=17% Similarity=0.185 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChh
Q 019274 65 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 65 ~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~ 118 (343)
..+.+.+++.|++++.+ .|++|..++ . .|.++ ++++.+|++|+|++..
T Consensus 60 ~~~~~~~~~~gv~~~~~-~v~~id~~~--~---~v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 60 VPLAPLLPKFNIEFINE-KAESIDPDA--N---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp EESTTTGGGGTEEEECS-CEEEEETTT--T---EEEETTCCEEECSEEEECCCCE
T ss_pred HHHHHHHHhcCCEEEEE-EEEEEECCC--C---EEEECCCcEEECCEEEEcCCcc
Confidence 33445566789999875 899987654 3 35565 5679999999999864
No 277
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=50.27 E-value=26 Score=29.94 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=31.2
Q ss_pred CCCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHh
Q 019274 258 RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 258 ~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~ 300 (343)
..+|.+||+|.+||-+..++ ..+.-|+..|+.||..|.+.+
T Consensus 265 ~~~Ts~pgIyA~GDv~~~~~--~~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 265 DMTTSVPGIFAAGDVRDKGL--RQIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp TSBCSSTTEEECSTTBSCSC--CSHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeecCCCcc--hHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999999865333 355668889999999997654
No 278
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=49.54 E-value=9 Score=36.38 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=32.0
Q ss_pred HHHcCCeEEc--ceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 71 MRTRGCEFLD--GRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 71 l~~~G~~i~~--~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
+.+.++++.. +++|++|.- . +|+++ |+++++|.||+|++....
T Consensus 340 l~~~nV~lv~~~~~~I~~it~----~---gv~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 340 YNRPNVEAVAIKENPIREVTA----K---GVVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp GGSTTEEEEETTTSCEEEECS----S---EEEETTCCEEECSEEEECCCBSCS
T ss_pred hcCCCEEEEeCCCCCccEEec----C---eEEcCCCCEEECCEEEECCccCcc
Confidence 3455778875 788988852 1 36665 678999999999998754
No 279
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=49.01 E-value=11 Score=35.12 Aligned_cols=37 Identities=14% Similarity=0.260 Sum_probs=30.1
Q ss_pred CCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCC
Q 019274 262 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 262 ~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
..+|+|.+||... ++ ....|+..|+.||..|...++.
T Consensus 342 s~~~vya~GD~~~--~~--~~~~A~~~g~~aa~~i~~~lg~ 378 (493)
T 1y56_A 342 IKDGIYVAGSAVS--IK--PHYANYLEGKLVGAYILKEFGY 378 (493)
T ss_dssp EETTEEECSTTTC--CC--CHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeccCC--cc--CHHHHHHHHHHHHHHHHHHcCC
Confidence 5689999999964 33 4567899999999999998864
No 280
>2vog_B BCL-2-modifying factor; protein-protein complex, BH3, apoptosis, Pro-surviVal; 1.9A {Mus musculus}
Probab=48.51 E-value=11 Score=19.23 Aligned_cols=16 Identities=19% Similarity=0.507 Sum_probs=12.0
Q ss_pred hHHHHHHHHHHhhhcC
Q 019274 319 EALRTVNRRFNEIRAQ 334 (343)
Q Consensus 319 ~~~~~~~~~~~~~~~~ 334 (343)
--+.||.++|||+.-|
T Consensus 11 ~KLQcI~DQFHR~h~Q 26 (27)
T 2vog_B 11 RKLQCIADQFHRLHTQ 26 (27)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3578999999998644
No 281
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.40 E-value=39 Score=30.97 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=32.2
Q ss_pred HHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChh
Q 019274 67 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 118 (343)
Q Consensus 67 l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~ 118 (343)
+.+.+++.|++++.++.+. + ++ .. |.++++++++|++|+|++..
T Consensus 102 ~~~~~~~~gv~~~~g~~~~-~--~~--~~---v~v~~~~~~~d~lviATGs~ 145 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV-L--DG--KQ---VEVDGQRIQCEHLLLATGSS 145 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE-E--ET--TE---EEETTEEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEEEEEEE-c--cC--CE---EEEeeEEEEeCEEEEeCCCC
Confidence 3456678899999998764 2 33 32 45556789999999999974
No 282
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=48.38 E-value=16 Score=32.25 Aligned_cols=74 Identities=14% Similarity=0.098 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHHH
Q 019274 212 QVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 291 (343)
Q Consensus 212 e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~ 291 (343)
+..+.+++.+.++||++. .+. ..| .+....+|+..... ......+|+|++..+ .++ ++.-+..+|+.
T Consensus 283 ~~~~~l~~~~~~~~P~l~--~~~----~~~-~g~r~~t~d~~p~i-g~~~~~~~l~~~~G~--~g~---G~~~ap~~g~~ 349 (372)
T 2uzz_A 283 SDGSEAFPFLRNVLPGIG--CCL----YGA-ACTYDNSPDEDFII-DTLPGHDNTLLITGL--SGH---GFKFASVLGEI 349 (372)
T ss_dssp TGGGSSHHHHHHHSCSCC--CEE----EEC-CCEEEECTTSCCCE-EEETTEEEEEEECCC--CSC---CGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCC--ccc----eee-EEeeccCCCCCeEE-ecCCCCCCEEEEeCC--Ccc---chhccHHHHHH
Confidence 445678899999999886 232 224 22333444432211 001235799988655 234 34458889999
Q ss_pred HHHHHHH
Q 019274 292 AANRVVD 298 (343)
Q Consensus 292 aA~~il~ 298 (343)
+|+.|+.
T Consensus 350 la~~i~~ 356 (372)
T 2uzz_A 350 AADFAQD 356 (372)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9998875
No 283
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=48.07 E-value=27 Score=32.34 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=29.1
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
.++..+|+|.+||... .+ .....|...|+.||+.|+.
T Consensus 312 ~~t~~~~IyA~GD~~~--~~-~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIVG--QP-MLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SBCSSTTEEECGGGTC--SS-CCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEcccC--CC-ccHHHHHHHHHHHHHHHcC
Confidence 3467899999999964 23 3456688999999999986
No 284
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=47.42 E-value=32 Score=31.66 Aligned_cols=37 Identities=24% Similarity=0.253 Sum_probs=28.9
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
.++..+|+|.+||... .+ .....|...|+.||+.|+.
T Consensus 297 ~~t~~~~Iya~GD~~~--~~-~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 297 METSVPGVYAIGDAAR--PP-LLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CBCSSTTEEECGGGTC--SS-CCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCC--Cc-ccHHHHHHHHHHHHHHhcC
Confidence 3467899999999964 23 3456688999999999985
No 285
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=47.30 E-value=5.9 Score=35.50 Aligned_cols=46 Identities=17% Similarity=0.110 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEECCeEEecCEEEEeeChhhHHH
Q 019274 63 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQE 122 (343)
Q Consensus 63 l~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~g~~~~ad~VV~a~p~~~~~~ 122 (343)
|.+.|.+.+++.|++|+++++|++|.... +++||.||.|.+..+. +
T Consensus 100 l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-------------~~~ad~vV~AdG~~S~-R 145 (381)
T 3c4a_A 100 LVHALRDKCRSQGIAIRFESPLLEHGELP-------------LADYDLVVLANGVNHK-T 145 (381)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCSGGGCC-------------GGGCSEEEECCGGGGG-T
T ss_pred HHHHHHHHHHHCCCEEEeCCEeccchhcc-------------cccCCEEEECCCCCch-H
No 286
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.05 E-value=28 Score=31.98 Aligned_cols=49 Identities=8% Similarity=0.036 Sum_probs=34.3
Q ss_pred hHHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEEC-C--eEEecCEEEEeeChh
Q 019274 64 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K--ETYSAGAVVLAVGIS 118 (343)
Q Consensus 64 ~~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~~-g--~~~~ad~VV~a~p~~ 118 (343)
.+.+.+.+++.|++++.++.+. .+. +. +.|.+. | .++++|+||+|++..
T Consensus 99 ~~~~~~~~~~~gv~~~~g~~~~---~~~--~~-~~v~~~~G~~~~i~~d~lIiAtGs~ 150 (470)
T 1dxl_A 99 TRGIEGLFKKNKVTYVKGYGKF---VSP--SE-ISVDTIEGENTVVKGKHIIIATGSD 150 (470)
T ss_dssp HHHHHHHHHHHTCEEEESCEEE---EET--TE-EEECCSSSCCEEEECSEEEECCCEE
T ss_pred HHHHHHHHHhCCCEEEEeEEEE---ecC--CE-EEEEeCCCceEEEEcCEEEECCCCC
Confidence 3345566777899999998764 344 33 345443 4 578999999999974
No 287
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=46.66 E-value=19 Score=33.20 Aligned_cols=38 Identities=24% Similarity=0.211 Sum_probs=30.0
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||... .+ .....|...|+.||+.|+..
T Consensus 296 ~~t~~~~Iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 296 MKTNIPNVFATGDANG--LA-PYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CBCSSTTEEECGGGTC--SC-CSHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCEEEEEecCC--CC-ccHhHHHHHHHHHHHHHhCC
Confidence 3467899999999965 23 35567899999999999864
No 288
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=46.31 E-value=21 Score=34.09 Aligned_cols=38 Identities=18% Similarity=0.126 Sum_probs=29.9
Q ss_pred CCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 260 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 260 ~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
+|..+|+|.+||... +.+ .....|+..|+.||+.|+..
T Consensus 422 ~ts~~~VyA~GD~~~-~~~-~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 422 QTTVSNVYAIGDINA-GKP-QLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp BCSSTTEEECGGGBT-TSC-CCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEeeecC-CCC-ccHHHHHHhHHHHHHHHhcC
Confidence 467899999999954 323 35667889999999999864
No 289
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=46.01 E-value=11 Score=35.83 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=29.2
Q ss_pred CCCCCeEEeeccccCCCC-----CccchHHHHHHHHHHHHHHHHh
Q 019274 261 TSFPNLFMAGDWITTRHG-----SWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~-----~~~~ega~~Sg~~aA~~il~~~ 300 (343)
++|||||.||+-+..-++ +.++-.|+.+|++|++.+.+..
T Consensus 519 ~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 519 KPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp CEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 589999999998643222 1345568899999999887654
No 290
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=45.96 E-value=23 Score=32.72 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=30.5
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHh
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~ 300 (343)
.++..+|+|.+||.+. .+ .....|...|+.||+.|+...
T Consensus 306 ~~t~~~~Iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 306 CATSVPGVYAIGDVVR--GA-MLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp SBCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHHHCC
T ss_pred cccCCCCEEEEEccCC--Cc-ccHHHHHHHHHHHHHHhcCCC
Confidence 3467899999999963 33 356678999999999998643
No 291
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=45.48 E-value=23 Score=32.73 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=29.7
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||... .+ .....|...|+.||+.|+..
T Consensus 313 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 313 FNSKFPHIKVVGDVTF--GP-MLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp SBCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEeeccCC--Cc-ccHHHHHHHHHHHHHHHcCC
Confidence 3467899999999964 33 34567889999999999874
No 292
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=44.38 E-value=23 Score=33.00 Aligned_cols=38 Identities=24% Similarity=0.116 Sum_probs=29.9
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||.+. .+ .....|...|+.||+.|+..
T Consensus 301 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 301 LQTSVDHIFVAGDANN--TL-TLLHEAADDGKVAGTNAGAY 338 (492)
T ss_dssp CBCSSTTEEECGGGGT--SS-CSHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCEEEEEecCC--CC-ccHHHHHHHHHHHHHHHcCC
Confidence 4467899999999964 23 34567899999999999873
No 293
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=44.24 E-value=23 Score=32.60 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=29.8
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++.++|+|.+||... .+ .....|...|+.||+.|+..
T Consensus 294 ~~t~~~~iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 294 SRTSTPGIYALGDVTD--RV-QLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp CBCSSTTEEECSGGGS--SC-CCHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCCEEEEEecCC--CC-CChHHHHHHHHHHHHHHcCC
Confidence 3467899999999864 23 35567899999999999864
No 294
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=43.95 E-value=20 Score=33.26 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=30.2
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||.+. .+ .....|...|+.||+.|+..
T Consensus 326 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 326 FQTSIAGVYAIGDVVR--GP-MLAHKAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp CBCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCCCEEEEEecCC--Cc-cchhHHHHHHHHHHHHHcCC
Confidence 4467899999999863 34 35677899999999999864
No 295
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=43.81 E-value=28 Score=32.12 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=30.1
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||... .+ .....|...|+.||+.|+..
T Consensus 319 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 319 QNTNVKGIYAVGDVCG--KA-LLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CBCSSTTEEECGGGGC--SS-CCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCCEEEEEecCC--CC-ccHhHHHHHHHHHHHHHcCC
Confidence 3467899999999863 34 35667899999999999865
No 296
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=43.76 E-value=27 Score=32.37 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=29.5
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++.++|+|.+||... .+ .....|...|+.+|+.|+..
T Consensus 314 ~~t~~~~Iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 314 MTTNVSHIWAVGDVTG--HI-QLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SBCSSTTEEECGGGGT--SC-CCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCEEEEEecCC--CC-cCHHHHHHHHHHHHHHHcCC
Confidence 3467899999999864 23 35567899999999999864
No 297
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=43.44 E-value=13 Score=35.59 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=28.9
Q ss_pred CCCCCeEEeeccccCCCC-----CccchHHHHHHHHHHHHHHHH
Q 019274 261 TSFPNLFMAGDWITTRHG-----SWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~-----~~~~ega~~Sg~~aA~~il~~ 299 (343)
++|||||.||+-+..-|+ +.++-.|+.+|++|++.+.+.
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~ 568 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKF 568 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 689999999987643222 134667889999999998764
No 298
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=42.94 E-value=13 Score=35.50 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=28.6
Q ss_pred CCCCCeEEeeccccCCCC-----CccchHHHHHHHHHHHHHHHH
Q 019274 261 TSFPNLFMAGDWITTRHG-----SWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~-----~~~~ega~~Sg~~aA~~il~~ 299 (343)
++|||||.||+-+..-++ +.++-.|+.+|++|++.+.+.
T Consensus 524 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp CEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 589999999987653222 134566789999999988764
No 299
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=42.77 E-value=19 Score=32.32 Aligned_cols=40 Identities=15% Similarity=0.002 Sum_probs=30.7
Q ss_pred CCCCCCCeEEeeccccC-C-CCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITT-R-HGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~-g-~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||.... + .+ .....|...|+.||..|++.
T Consensus 253 ~~t~~~~IyA~GD~a~~~~~~~-~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 253 METSIKDIYACGDVAEFYGKNP-GLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp CBCSSTTEEECGGGEEETTBCC-CCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEEeeEecCCCcc-cHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999752 1 12 35677899999999999864
No 300
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=42.75 E-value=19 Score=35.08 Aligned_cols=42 Identities=24% Similarity=0.293 Sum_probs=29.5
Q ss_pred CCCCCCCeEEeeccccC-CCC-----CccchHHHHHHHHHHHHHHHHh
Q 019274 259 GFTSFPNLFMAGDWITT-RHG-----SWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~-g~~-----~~~~ega~~Sg~~aA~~il~~~ 300 (343)
.++++||||.||+...+ -|+ +.++-.|+..|+.|++.+.+..
T Consensus 381 ~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 381 GEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp SBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 44689999999996421 122 2345667889999999887654
No 301
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=42.42 E-value=40 Score=30.90 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=29.7
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||.... .+ .....|...|+.||+.|+..
T Consensus 302 ~~t~~~~IyA~GD~~~~-~~-~~~~~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 302 FETSIPDVYAIGDVVDK-GP-MLAHKAEDEGVACAEILAGK 340 (468)
T ss_dssp SBCSSTTEEECGGGBSS-SC-SCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEeeccCCC-CC-ccHhHHHHHHHHHHHHHcCC
Confidence 34678999999998641 33 35566889999999999863
No 302
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=41.64 E-value=26 Score=33.22 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=31.6
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHh
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~ 300 (343)
.+|.+||+|.+||-+. ++| ....-|...|+.+++.++...
T Consensus 346 ~~Ts~p~IyAiGDv~~-~~p-~La~~A~~eg~~aa~~i~g~~ 385 (542)
T 4b1b_A 346 SCTNIPSIFAVGDVAE-NVP-ELAPVAIKAGEILARRLFKDS 385 (542)
T ss_dssp SBCSSTTEEECTTSBT-TCC-CCHHHHHHHHHHHHHHHHSCC
T ss_pred ccccCCCeEEeccccC-Cch-hHHHHHHHHHHHHHHHHhcCC
Confidence 4578999999999975 555 356678889999999998643
No 303
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=40.30 E-value=27 Score=31.97 Aligned_cols=37 Identities=14% Similarity=0.139 Sum_probs=29.2
Q ss_pred CCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 260 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 260 ~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
++..+|+|.+||... .+ .....|...|+.+|+.|+..
T Consensus 292 ~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 292 NTNIEGIYAVGDNTG--AV-ELTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp BCSSTTEEECSGGGT--SC-CCHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCEEEEeccCC--CC-ccHHHHHHHHHHHHHHHcCC
Confidence 467899999999964 23 35567899999999999863
No 304
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=39.97 E-value=29 Score=32.10 Aligned_cols=37 Identities=22% Similarity=0.274 Sum_probs=29.3
Q ss_pred CCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 260 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 260 ~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
++..+|+|.+||... .+ .....|...|+.||+.|+..
T Consensus 311 ~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 311 NTNVPNIYSLGDVVG--KV-ELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp BCSSTTEEECGGGTT--SS-CCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCEEEEEecCC--Cc-ccHHHHHHHHHHHHHHhcCC
Confidence 467899999999953 33 35667899999999999853
No 305
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=39.30 E-value=26 Score=32.24 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=29.6
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||... .+ .....|...|+.||+.|+..
T Consensus 308 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVA--GP-MLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp CBCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHTTC
T ss_pred CccCCCCEEEeeecCC--CC-ccHHHHHHHHHHHHHHhcCC
Confidence 3467899999999864 33 34567889999999999864
No 306
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=38.26 E-value=14 Score=34.64 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=27.4
Q ss_pred CCCCCeEEeeccccCC----CC-CccchHHHHHHHHHHHHHHH
Q 019274 261 TSFPNLFMAGDWITTR----HG-SWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g----~~-~~~~ega~~Sg~~aA~~il~ 298 (343)
++|+|||-||.-+..- +. +.++-.|+.+|++|++.+.+
T Consensus 466 ~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 466 EPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp SEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 5899999999876421 11 13466788999999988754
No 307
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=38.15 E-value=29 Score=33.61 Aligned_cols=40 Identities=25% Similarity=0.334 Sum_probs=24.9
Q ss_pred CCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHh
Q 019274 260 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 260 ~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~ 300 (343)
.++++|||-||+...++.. ....+++..|+.|++.+.+..
T Consensus 428 ~t~I~GLyAaGe~a~~~~~-r~~~~sl~~G~~ag~~aa~~~ 467 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPH-KFSSGSFTEGRIAAKAAVRFI 467 (643)
T ss_dssp BCSSBTEEECGGGBCSCCC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeecccccccc-ccchhHHHHHHHHHHHHHHHH
Confidence 3789999999998753221 122345666666666655443
No 308
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=38.11 E-value=27 Score=29.63 Aligned_cols=42 Identities=17% Similarity=0.236 Sum_probs=31.8
Q ss_pred CCCCeEEeeccccC--C---CCCccchHHHHHHHHHHHHHHHHhCCCC
Q 019274 262 SFPNLFMAGDWITT--R---HGSWSQERSYVTGLEAANRVVDYLGDGS 304 (343)
Q Consensus 262 ~~~~L~laGd~~~~--g---~~~~~~ega~~Sg~~aA~~il~~~~~~~ 304 (343)
..|++|.+|+.+.. + .+ .+..+++.||..+|..|.+.+..++
T Consensus 232 ~~p~i~a~G~~~~~~~g~~~~g-p~~~~~~~sG~~~a~~i~~~l~~~~ 278 (284)
T 1rp0_A 232 VVPGMIVTGMEVAEIDGAPRMG-PTFGAMMISGQKAGQLALKALGLPN 278 (284)
T ss_dssp EETTEEECTHHHHHHHTCEECC-SCCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccCCEEEEeeehhhhcCCCCcC-hHHHHHHHhHHHHHHHHHHHhhhhh
Confidence 35899999987631 1 12 3567899999999999999987543
No 309
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=37.05 E-value=25 Score=32.44 Aligned_cols=39 Identities=13% Similarity=0.154 Sum_probs=29.1
Q ss_pred CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 261 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
+.++|+|.+||-.. + |.+.+..|...|..+|+.|+.++.
T Consensus 349 t~~pgvya~GD~~~-g-p~~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 349 NGSPNEYVVGWIKR-G-PTGVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp TTCSSEEECTHHHH-C-SCSCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCC-C-CchhHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999875 2 212344578899999999988764
No 310
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=36.38 E-value=31 Score=32.10 Aligned_cols=38 Identities=16% Similarity=0.011 Sum_probs=29.4
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||... .+ .....|...|+.||+.|+..
T Consensus 305 ~~t~~~~IyA~GD~~~--~~-~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 305 SRTLATGIYAAGDCTG--LL-PLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp SBCSSTTEEECSGGGT--SC-SCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEeccCC--Cc-ccHHHHHHHHHHHHHHhcCC
Confidence 3467899999999964 33 34556889999999999863
No 311
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=35.84 E-value=18 Score=34.41 Aligned_cols=42 Identities=17% Similarity=0.317 Sum_probs=31.0
Q ss_pred HHHcCCeEE--cceeeeEEEecCCCCeEEEEEEC-CeEEecCEEEEeeChhhH
Q 019274 71 MRTRGCEFL--DGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 120 (343)
Q Consensus 71 l~~~G~~i~--~~~~V~~I~~~~~~g~v~~V~~~-g~~~~ad~VV~a~p~~~~ 120 (343)
+++.++++. ..++|++|.- + +|+++ | ++++|.||+|++....
T Consensus 353 l~~~~V~lvd~~~~~I~~it~-~------gv~~~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 353 YNRDNVELVDLRSTPIVGMDE-T------GIVTTGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GGSTTEEEEETTTSCEEEEET-T------EEEESSC-EEECSEEEECCCEEES
T ss_pred hcCCCEEEEeCCCCCceEEeC-C------cEEeCCC-ceecCEEEECCccccc
Confidence 455678887 3578998863 1 35565 6 9999999999998654
No 312
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=35.60 E-value=30 Score=32.41 Aligned_cols=37 Identities=30% Similarity=0.317 Sum_probs=29.3
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
.++..+|+|.+||... .+ .....|...|+.||+.|+.
T Consensus 341 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 341 LQTSVPNVYAVGDLIG--GP-MEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp SBCSSTTEEECGGGGC--SS-CSHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeecCC--Cc-ccHHHHHHHHHHHHHHHcC
Confidence 3467899999999974 33 3556789999999999986
No 313
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=35.07 E-value=38 Score=31.11 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=28.5
Q ss_pred CCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 260 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 260 ~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
++..+|+|.+||... .+ .....|...|+.+|+.|+.
T Consensus 291 ~t~~~~Iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 291 NTNVPGVYALGDITG--RD-QLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp BCSSTTEEECGGGGT--SC-CCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEeecCC--Cc-ccHHHHHHHHHHHHHHHcC
Confidence 467899999999964 23 3556788999999999975
No 314
>4fay_A Microcompartments protein; BMC domain, shell protein, glycerol-binding protein; 1.56A {Lactobacillus reuteri}
Probab=34.70 E-value=50 Score=27.77 Aligned_cols=42 Identities=24% Similarity=0.327 Sum_probs=30.8
Q ss_pred CCCCCCCCC---eEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCCCCc
Q 019274 257 MRGFTSFPN---LFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSF 305 (343)
Q Consensus 257 p~~~~~~~~---L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~~~~ 305 (343)
|...+.+.| +.+.||. +.+..|+..++.++.++|..++...+
T Consensus 206 P~~gt~~ggk~~~~lTGd~-------sAVkaAv~A~~~~g~~ll~~~g~~p~ 250 (258)
T 4fay_A 206 PSHGTSFSNEGCLTITGDS-------GAVRQAVMAGREVGLKLLSQFGEEPV 250 (258)
T ss_dssp TTBSSSSCSCEEEEEESCH-------HHHHHHHHHHHHHHHHHHHTTSSCCB
T ss_pred CCCCccccceEEEEEEeCH-------HHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 444456655 6788887 45678889999999999998885443
No 315
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=34.60 E-value=19 Score=34.81 Aligned_cols=41 Identities=22% Similarity=0.271 Sum_probs=30.3
Q ss_pred CCCCCeEEeecccc-CCC-----CCccchHHHHHHHHHHHHHHHHhC
Q 019274 261 TSFPNLFMAGDWIT-TRH-----GSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 261 ~~~~~L~laGd~~~-~g~-----~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
++++|||.||+... .-| ++.++-.|+..|+.|++.+.+...
T Consensus 387 t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 433 (621)
T 2h88_A 387 KVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETCK 433 (621)
T ss_dssp EEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhh
Confidence 57999999999642 112 224567788999999999887654
No 316
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=33.63 E-value=40 Score=34.70 Aligned_cols=39 Identities=26% Similarity=0.256 Sum_probs=31.3
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHh
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~ 300 (343)
.+|..+|+|.+||-.. .+ .....|+..|+.||..|...+
T Consensus 469 ~~Ts~~~VfA~GD~~~--~~-~~~~~A~~~G~~aA~~i~~~L 507 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVG--MA-NTTVESVNDGKQASWYIHKYI 507 (1025)
T ss_dssp CBCSSTTEEECSGGGC--SC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCCC--Cc-hHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999874 23 366778999999999998765
No 317
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=33.47 E-value=41 Score=31.17 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=29.4
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
.++..+|+|.+||... + + .....|...|+.||+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~-~-~-~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 314 SKTNVDNIYAIGDVTD-R-V-MLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CBCSSTTEEECGGGGC-S-C-CCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCC-C-c-cCHHHHHHHHHHHHHHhcC
Confidence 3467899999999974 2 3 3566789999999999986
No 318
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=33.40 E-value=41 Score=31.23 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=29.2
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
.++..+|+|.+||... .+ .....|...|+.||+.|+.
T Consensus 318 ~~t~~~~IyA~GD~~~--~~-~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 318 SRTNVPNIYAIGDITD--RL-MLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CBCSSTTEEECGGGGC--SC-CCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCC--Cc-cCHHHHHHHHHHHHHHhcC
Confidence 3467899999999974 23 3556789999999999985
No 319
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=32.95 E-value=37 Score=31.15 Aligned_cols=38 Identities=26% Similarity=0.167 Sum_probs=29.5
Q ss_pred CCCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 259 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
.++..+|+|.+||... .+ .....|...|..+|..|+..
T Consensus 297 ~~t~~~~iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 297 MRTSNPNIYAAGDCTD--QP-QFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp CBCSSTTEEECSTTBS--SC-CCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEeccCC--Cc-ccHHHHHHHHHHHHHHHcCC
Confidence 3467899999999964 33 35567889999999999753
No 320
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=32.62 E-value=42 Score=31.37 Aligned_cols=37 Identities=14% Similarity=-0.018 Sum_probs=30.2
Q ss_pred CCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 262 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 262 ~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
..+|+|.+||.....+| .+-..|...|..+|+.|.+.
T Consensus 363 ~~~~IfAiGD~a~~~~p-~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLP-PTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSC-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCC-CchHHHHHHHHHHHHHHHHH
Confidence 68999999998766666 46677889999999998653
No 321
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=31.24 E-value=17 Score=33.66 Aligned_cols=41 Identities=27% Similarity=0.309 Sum_probs=26.9
Q ss_pred CCCCCCCCeEEeeccccCCC-C-----CccchHHHHHHHHHHHHHHH
Q 019274 258 RGFTSFPNLFMAGDWITTRH-G-----SWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 258 ~~~~~~~~L~laGd~~~~g~-~-----~~~~ega~~Sg~~aA~~il~ 298 (343)
..++++||||-|||....+. + ..++..++..|+.|++.+.+
T Consensus 324 ~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 324 RGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp TCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred CCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 34578999999999876322 1 12344556677777777654
No 322
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=31.20 E-value=33 Score=31.67 Aligned_cols=38 Identities=11% Similarity=0.073 Sum_probs=29.2
Q ss_pred CCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCC
Q 019274 263 FPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 263 ~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
++|+|.+||... +.. +.+..|+..|..+|+.|+..+..
T Consensus 359 ~p~vya~Gd~~~-g~~-~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 359 VPGLYCSGWVKR-GPT-GVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CTTEEECTHHHH-CTT-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCc-CCC-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999864 222 23556889999999999988753
No 323
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=30.38 E-value=71 Score=29.08 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=28.8
Q ss_pred CCCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHH
Q 019274 260 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 299 (343)
Q Consensus 260 ~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~ 299 (343)
++..+|+|.+||... .+ .....|...|..+|+.|+..
T Consensus 291 ~t~~~~iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 291 RTRVPHIYAIGDVVR--GP-MLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp BCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEecCCC--Cc-cCHHHHHHhHHHHHHHHcCC
Confidence 456799999999864 23 34556889999999999863
No 324
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=30.16 E-value=22 Score=34.74 Aligned_cols=37 Identities=16% Similarity=0.049 Sum_probs=29.5
Q ss_pred CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 261 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
+..+|+|.+||...+ ..+..|+..|..||..|.+.+.
T Consensus 639 t~~~~VyaiGD~~~~----~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 639 GEIASVRGIGDAWAP----GTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp TSCSEEEECGGGTSC----BCHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCCCEEEEeCCCch----hhHHHHHHHHHHHHHHHHhhcc
Confidence 457899999999753 3455699999999999987754
No 325
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=30.09 E-value=99 Score=30.80 Aligned_cols=75 Identities=11% Similarity=0.028 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhhhcccCCCCceeeeEEEecCCCccccCCCCCCCCCCCCCCCCCeEEeeccccCCCCCccchHHHHHHH
Q 019274 211 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGL 290 (343)
Q Consensus 211 ~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~p~~~~~~~~L~laGd~~~~g~~~~~~ega~~Sg~ 290 (343)
.+..+.+++.+.++||.+.+..+... |..- ..++|+..... ......+|+|+|.. ++ +..+...|+
T Consensus 305 ~~~~~~l~~~~~~~~P~l~~~~i~~~----w~G~-r~~t~D~~PiI-G~~p~~~gl~va~G-----~G---~~~ap~~g~ 370 (830)
T 1pj5_A 305 LEDFLPAWEATKQLLPALADSEIEDG----FNGI-FSFTPDGGPLL-GESKELDGFYVAEA-----VW---VTHSAGVAK 370 (830)
T ss_dssp HHHHHHHHHHHHHHCGGGGGSCEEEE----EEEE-EEECTTSCCEE-EECSSSBTEEEEES-----CC---GGGHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccccCcceE----EEee-cccCCCCCeee-ccCCCCCCEEEEEC-----ch---HHhhHHHHH
Confidence 45566788999999998865444332 2111 12233332111 01123689998853 22 233677899
Q ss_pred HHHHHHHHH
Q 019274 291 EAANRVVDY 299 (343)
Q Consensus 291 ~aA~~il~~ 299 (343)
.+|+.|+..
T Consensus 371 ~la~li~~~ 379 (830)
T 1pj5_A 371 AMAELLTTG 379 (830)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHhCC
Confidence 999999875
No 326
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=29.96 E-value=20 Score=34.41 Aligned_cols=39 Identities=26% Similarity=0.317 Sum_probs=27.6
Q ss_pred CCCCeEEeecccc-CCCC-----CccchHHHHHHHHHHHHHHHHh
Q 019274 262 SFPNLFMAGDWIT-TRHG-----SWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 262 ~~~~L~laGd~~~-~g~~-----~~~~ega~~Sg~~aA~~il~~~ 300 (343)
+++|||.||+... .-|+ +.++-.|+..|+.|++.+.+..
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~ 423 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESI 423 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 7999999999642 1222 2345668889999998887654
No 327
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=29.86 E-value=46 Score=34.00 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=31.0
Q ss_pred CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhCC
Q 019274 261 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 302 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~~ 302 (343)
+..+|+|.+||... .+ .+..|+..|..||..|+..++.
T Consensus 408 ts~p~IyAaGD~a~--~~--~l~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 408 DAVANQHLAGAMTG--RL--DTASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp SCCTTEEECGGGGT--CC--SHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEEecCC--ch--hHHHHHHHHHHHHHHHHHHcCC
Confidence 56899999999864 33 3447899999999999998874
No 328
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=28.40 E-value=78 Score=28.25 Aligned_cols=75 Identities=13% Similarity=0.087 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhhhcccCCCCc---------eeeeEEEecCCCccccCCCCCCCCCCCC-CCCCCeEEeeccccCCCCCc
Q 019274 211 DQVVAKAVSYLSKCIKDFSTAT---------VMDHKIRRFPKSLTHFFPGSYKYMMRGF-TSFPNLFMAGDWITTRHGSW 280 (343)
Q Consensus 211 ~e~~~~~~~~L~~~~p~~~~~~---------~~~~~~~r~~~~~~~~~~g~~~~~p~~~-~~~~~L~laGd~~~~g~~~~ 280 (343)
++..+.+++.+ ++||.+.+.. ++.. |..- ...+++.. |... .+ +|||++..+. +
T Consensus 315 ~~~~~~l~~~~-~~~P~l~~~~~~~~r~~~~i~~~----w~G~-r~~t~D~~---P~ig~~~-~gl~~a~G~~--g---- 378 (405)
T 3c4n_A 315 RELLEDLVGLM-DAVPALAGEGLELGRSSADVPGA----WLAL-PGGRPDAP---PQAEELA-PGLHLLLGGP--L---- 378 (405)
T ss_dssp HHHHHHHHHHT-TTCGGGGSSCBCCCSSGGGSCEE----EEEE-GGGCTTCC---CEEEEEE-TTEEEEECCT--T----
T ss_pred HHHHHHHHHHH-HhCCCccccCccccccccceeeE----EEee-cCcCCCCC---CEecccC-CCeEEEEccC--c----
Confidence 55666666554 8899876522 2222 3111 12233322 2211 13 7999886541 1
Q ss_pred cchHHHHHHHHHHHHHHHHhC
Q 019274 281 SQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 281 ~~ega~~Sg~~aA~~il~~~~ 301 (343)
+..-+...|+.+|+.|+....
T Consensus 379 ~~~~ap~~a~~la~~i~~~~~ 399 (405)
T 3c4n_A 379 ADTLGLAAAHELAQRVSASLE 399 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhCchh
Confidence 234578899999999987644
No 329
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=28.31 E-value=61 Score=29.74 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=24.1
Q ss_pred CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHH
Q 019274 261 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 298 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~ 298 (343)
+..||||++||-.. + ..+..|-..|+.+|+.+.+
T Consensus 305 t~~p~i~aiGd~~~-~---~~~~~a~~qa~~~a~~l~G 338 (464)
T 2xve_A 305 EDNPKFFYIGMQDQ-W---YSFNMFDAQAWYARDVIMG 338 (464)
T ss_dssp SSSTTEEECSCSCC-S---SCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCccc-c---cchHHHHHHHHHHHHHHcC
Confidence 56799999999643 2 2445566778888877764
No 330
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=27.11 E-value=56 Score=30.31 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=25.2
Q ss_pred HHHHHHHHHcCCeEEcceeeeEEEecCCCCeEEEEEE-----------C-CeEEecCEEEEeeChh
Q 019274 65 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-----------G-KETYSAGAVVLAVGIS 118 (343)
Q Consensus 65 ~~l~~~l~~~G~~i~~~~~V~~I~~~~~~g~v~~V~~-----------~-g~~~~ad~VV~a~p~~ 118 (343)
+.+.+.+++.|++++.++.+ .+ +. .++ .+.. + +.++++|++|+|++..
T Consensus 93 ~~~~~~~~~~gv~~~~g~~~-~i--d~--~~v-~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~ 152 (500)
T 1onf_A 93 NIYRQNLSKDKVDLYEGTAS-FL--SE--NRI-LIKGTKDNNNKDNGPLNEEILEGRNILIAVGNK 152 (500)
T ss_dssp HHHHHHHHHTTCEEEESCCC-CC-------------------------------CBSSEEECCCCC
T ss_pred HHHHHHHHhCCCEEEEeEEE-Ee--eC--CEE-EEEeccccccccccCCCceEEEeCEEEECCCCC
Confidence 34445567789999988643 22 22 222 2322 1 4578999999999963
No 331
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=25.54 E-value=71 Score=29.99 Aligned_cols=40 Identities=20% Similarity=0.210 Sum_probs=30.0
Q ss_pred CCCCeEEeeccccCCCCC-ccchHHHHHHHHHHHHHHHHhC
Q 019274 262 SFPNLFMAGDWITTRHGS-WSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 262 ~~~~L~laGd~~~~g~~~-~~~ega~~Sg~~aA~~il~~~~ 301 (343)
+++||+.+..++.|..+. ...--+++-|++||+.|+++++
T Consensus 504 Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 544 (546)
T 1kdg_A 504 GTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAG 544 (546)
T ss_dssp TCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTT
T ss_pred cCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcC
Confidence 789999999998864443 2233356789999999998765
No 332
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=24.70 E-value=32 Score=33.92 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=29.2
Q ss_pred CCCCCeEEeeccccCCCCCccchHHHHHHHHHHHHHHHHhC
Q 019274 261 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~~~~~ega~~Sg~~aA~~il~~~~ 301 (343)
+.++|+|.+||...+ ..+..|+..|..||..|.+.+.
T Consensus 664 t~~~~VyAiGD~~~~----~~~~~A~~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 664 NDIKGIYLIGDAEAP----RLIADATFTGHRVAREIEEANP 700 (729)
T ss_dssp GTCCEEEECGGGTSC----CCHHHHHHHHHHHHHTTTSSCT
T ss_pred cCCCCeEEEeCccch----hhHHHHHHHHHHHHHHhhhhcc
Confidence 567999999998642 3556799999999999976543
No 333
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=22.73 E-value=97 Score=28.75 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=25.2
Q ss_pred eEEcceeeeEEEecCCCCeEE-----------EEEE-CCeEEecCEEEEeeChh
Q 019274 77 EFLDGRRVTDFIYDEERCCIS-----------DVVC-GKETYSAGAVVLAVGIS 118 (343)
Q Consensus 77 ~i~~~~~V~~I~~~~~~g~v~-----------~V~~-~g~~~~ad~VV~a~p~~ 118 (343)
.+..+..|.++......+++. ++.+ +|+++++|.||+||+-.
T Consensus 355 ~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~ 408 (501)
T 4b63_A 355 RILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYN 408 (501)
T ss_dssp EEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEE
T ss_pred eecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCC
Confidence 466677777776543213321 1222 25688999999999964
No 334
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=22.39 E-value=72 Score=31.01 Aligned_cols=40 Identities=18% Similarity=0.250 Sum_probs=25.4
Q ss_pred CCCCCCCeEEeeccccC-CCCCccchHHHHHHHHHHHHHHHHh
Q 019274 259 GFTSFPNLFMAGDWITT-RHGSWSQERSYVTGLEAANRVVDYL 300 (343)
Q Consensus 259 ~~~~~~~L~laGd~~~~-g~~~~~~ega~~Sg~~aA~~il~~~ 300 (343)
..|.++|||.||+-... .|+ ...++...|..|+..+.+.+
T Consensus 448 ~~t~v~gl~a~Ge~~~~~~hg--~~~~sl~~g~~ag~~a~~~~ 488 (662)
T 3gyx_A 448 RMTTVEGLWTCADGVGASGHK--FSSGSHAEGRIVGKQMVRWY 488 (662)
T ss_dssp TBCSSBTEECCSSSBCSCCCC--HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCeEeCccccccccCc--cHhHHHHHHHHHHHHHHHHH
Confidence 45789999999998642 333 13445556666666655544
No 335
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=20.91 E-value=1.1e+02 Score=28.34 Aligned_cols=41 Identities=7% Similarity=0.036 Sum_probs=29.8
Q ss_pred CCCCCeEEeeccccCCCCC-ccchHHHHHHHHHHHHHHHHhC
Q 019274 261 TSFPNLFMAGDWITTRHGS-WSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 261 ~~~~~L~laGd~~~~g~~~-~~~ega~~Sg~~aA~~il~~~~ 301 (343)
-+++|||++..++.|..+. ...--+++-|+++|+.|+++..
T Consensus 460 ~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 460 AGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp TTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred eccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 3789999999998764443 2233356789999999987654
No 336
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=20.69 E-value=71 Score=28.13 Aligned_cols=39 Identities=10% Similarity=0.070 Sum_probs=29.7
Q ss_pred CCCeEEeeccccCCCCC--ccchHHHHHHHHHHHHHHHHhC
Q 019274 263 FPNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVDYLG 301 (343)
Q Consensus 263 ~~~L~laGd~~~~g~~~--~~~ega~~Sg~~aA~~il~~~~ 301 (343)
-++++++||..+...|. .++.-|+..|...|..|.....
T Consensus 310 ~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~ 350 (412)
T 4hb9_A 310 SSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVAS 350 (412)
T ss_dssp CCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhc
Confidence 36899999998754442 5778888999998888876543
No 337
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=20.34 E-value=95 Score=28.02 Aligned_cols=88 Identities=7% Similarity=-0.025 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHhhhcccCCCCceeeeEEEec--CCCcc--ccCCCCCCCCCCCCCCCCCeEE-eeccccCCCCC--cc
Q 019274 209 KDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRF--PKSLT--HFFPGSYKYMMRGFTSFPNLFM-AGDWITTRHGS--WS 281 (343)
Q Consensus 209 ~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~~r~--~~~~~--~~~~g~~~~~p~~~~~~~~L~l-aGd~~~~g~~~--~~ 281 (343)
+.++..+.+++.+...+|.+.+ .+.......+ +.... .+.|-. ..+...-..+++.+ +||..+.-.|. .+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~GDAah~~~p~~g~G 327 (430)
T 3ihm_A 251 DPRAFLDLMLEKLGKHHPSVAE-RIDPAEFDLANSSLDILQGGVVPAF--RDGHATLNNGKTIIGLGDIQATVDPVLGQG 327 (430)
T ss_dssp CHHHHHHHHHHHHHHHCHHHHT-TBCTTTCEESSSTTSEEEECCCCEE--BCSEEECTTSCEEEECGGGTEECCGGGCCH
T ss_pred CHHHHHHHHHHHHHHhCccHHH-HHhhchhccccCccceeecceeecc--cccccccCCCCEEEEecCccccCCCchhhh
Confidence 6778888888888888876543 1211110001 11110 011100 00111112356777 99998754442 56
Q ss_pred chHHHHHHHHHHHHHHHH
Q 019274 282 QERSYVTGLEAANRVVDY 299 (343)
Q Consensus 282 ~ega~~Sg~~aA~~il~~ 299 (343)
+.-|+.+|...++.|...
T Consensus 328 ~~~a~~da~~l~~~l~~~ 345 (430)
T 3ihm_A 328 ANMASYAAWILGEEILAH 345 (430)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 777888888888888653
Done!