BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019276
(343 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/336 (61%), Positives = 252/336 (75%), Gaps = 10/336 (2%)
Query: 4 DGENQTTTKPPPLPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVAD 61
D E T K PP+ KF + RIL+TGGAGF+GSHL DKLM + +EV V D
Sbjct: 68 DLEKSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVD 119
Query: 62 NYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 121
N+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN
Sbjct: 120 NFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTN 179
Query: 122 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAE 181
IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAE
Sbjct: 180 TIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE 239
Query: 182 TLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSF 241
T+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F
Sbjct: 240 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF 299
Query: 242 CYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPR 301
YVSD+V+GL+ LM + PVN+GNP E T+LE A+ +K L+ G EI+ + DDP+
Sbjct: 300 QYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQ 359
Query: 302 QRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRL 337
+RKPDI KAK +LGWEP V L +GL FR L
Sbjct: 360 KRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/336 (61%), Positives = 252/336 (75%), Gaps = 10/336 (2%)
Query: 4 DGENQTTTKPPPLPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVAD 61
D E T K PP+ KF + RIL+TGGAGF+GSHL DKLM + +EV V D
Sbjct: 68 DLEKSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVD 119
Query: 62 NYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 121
N+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN
Sbjct: 120 NFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTN 179
Query: 122 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAE 181
IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAE
Sbjct: 180 TIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE 239
Query: 182 TLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSF 241
T+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F
Sbjct: 240 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF 299
Query: 242 CYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPR 301
YVSD+V+GL+ LM + PVN+GNP E T+LE A+ +K L+ G EI+ + DDP+
Sbjct: 300 QYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQ 359
Query: 302 QRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRL 337
+RKPDI KAK +LGWEP V L +GL FR L
Sbjct: 360 KRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/336 (61%), Positives = 252/336 (75%), Gaps = 10/336 (2%)
Query: 4 DGENQTTTKPPPLPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVAD 61
D E T K PP+ KF + RIL+TGGAGF+GSHL DKLM + +EV V D
Sbjct: 68 DLEKSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVD 119
Query: 62 NYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 121
N+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN
Sbjct: 120 NFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTN 179
Query: 122 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAE 181
IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAE
Sbjct: 180 TIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE 239
Query: 182 TLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSF 241
T+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F
Sbjct: 240 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF 299
Query: 242 CYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPR 301
YVSD+V+GL+ LM + PVN+GNP E T+LE A+ +K L+ G EI+ + DDP+
Sbjct: 300 QYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQ 359
Query: 302 QRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRL 337
+RKPDI KAK +LGWEP V L +GL FR L
Sbjct: 360 KRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/336 (61%), Positives = 252/336 (75%), Gaps = 10/336 (2%)
Query: 4 DGENQTTTKPPPLPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVAD 61
D E T K PP+ KF + RIL+TGGAGF+GSHL DKLM + +EV V D
Sbjct: 68 DLEKSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVD 119
Query: 62 NYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 121
N+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN
Sbjct: 120 NFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTN 179
Query: 122 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAE 181
IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAE
Sbjct: 180 TIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE 239
Query: 182 TLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSF 241
T+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GEPLTV G+QTR+F
Sbjct: 240 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF 299
Query: 242 CYVSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPR 301
YVSD+V+GL+ LM + PVN+GNP E T+LE A+ +K L+ G EI+ + DDP+
Sbjct: 300 QYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQ 359
Query: 302 QRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRL 337
+RKPDI KAK +LGWEP V L +GL FR L
Sbjct: 360 KRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/334 (61%), Positives = 248/334 (74%), Gaps = 10/334 (2%)
Query: 6 ENQTTTKPPPLPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY 63
E T K PP+ KF + RIL+TGGAGF+GSHL DKLM + +EV V DN+
Sbjct: 71 ERSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNF 122
Query: 64 FTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVI 123
FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN I
Sbjct: 123 FTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTI 182
Query: 124 GTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETL 183
GTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+
Sbjct: 183 GTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETM 242
Query: 184 MFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCY 243
+ Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI QAL+GE LTV G QTR+F Y
Sbjct: 243 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQY 302
Query: 244 VSDMVDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQR 303
VSD+V+GL+ LM + PVN+GNP E ++++ A +K+L+ G EI + DDP++R
Sbjct: 303 VSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRR 362
Query: 304 KPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRL 337
KPDI KAK LLGWEP V L +GL FR L
Sbjct: 363 KPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/319 (62%), Positives = 243/319 (76%), Gaps = 10/319 (3%)
Query: 10 TTKPPPLPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGS 67
T K PP+ KF + RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG
Sbjct: 72 TQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGR 123
Query: 68 KDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLN 127
K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLN
Sbjct: 124 KRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLN 183
Query: 128 MLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDY 187
MLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y
Sbjct: 184 MLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAY 243
Query: 188 HRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDM 247
+Q G+++R+ARIFNT+G RM+++DGRVVSNFI QAL+GE LTV G+QTR+F YVSD+
Sbjct: 244 MKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDL 303
Query: 248 VDGLIRLMEGENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDI 307
V+GL+ LM + PVN+GNP E T+LE A+ +K L+ I+ + DDP++R+PDI
Sbjct: 304 VNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDI 363
Query: 308 SKAKELLGWEPKVKLRDGL 326
KAK LLGWEP V L +GL
Sbjct: 364 RKAKLLLGWEPVVPLEEGL 382
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 160/306 (52%), Gaps = 26/306 (8%)
Query: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPL 91
ILVTGGAGFIGSH+VDKL+EN +VI+ DN TG+K+N+ +P+ E + D+ +
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNY-DVIILDNLTTGNKNNI-----NPKAEFVNADIRDKD 55
Query: 92 LIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTS 143
L E V+ + H A + NPV NV+GT+N+L + ++ + + +S
Sbjct: 56 LDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASS 115
Query: 144 TSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNT 203
VYG+P P E + PI S Y K V E + Y+R +GI+ I R N
Sbjct: 116 GGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170
Query: 204 YGPRMN-IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLMEGENTGP 262
YG R + + V+S FI + L+ + + G QTR F YV D+ + + +N
Sbjct: 171 YGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNWKNE-I 229
Query: 263 VNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKP--DISKAKELLGWEPKV 320
VNIG E ++ EL + +K I G + + + P + + DI KA E LGW+P++
Sbjct: 230 VNIGTGKETSVNELFDIIKHEI--GFRGEAIYDKPREGEVYRIYLDIKKA-ESLGWKPEI 286
Query: 321 KLRDGL 326
L++G+
Sbjct: 287 DLKEGI 292
>sp|Q9ZAE8|RMLB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044
/ CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2
Length = 320
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 144/322 (44%), Gaps = 24/322 (7%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENE------KNEVIVADNY-FTGSKDNLKKWIGHPRFEL 82
M+ILVTGGAGFIGSH V L+ + +V V D + G+ NL + PRF
Sbjct: 1 MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSF 60
Query: 83 IRHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--V 135
+R D+ + LIE D + H A + +N++GT +L A R +
Sbjct: 61 VRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120
Query: 136 GARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQI 195
G R L ST EVYG W +P+ S Y K ++ L YH+ HG+ +
Sbjct: 121 G-RFLHVSTDEVYGSI-----DTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDV 174
Query: 196 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
+ R N YGPR + +++ F+ + L G + V G R + +VSD GL +
Sbjct: 175 VVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALAL 232
Query: 256 EGENTGPV-NIGNPGEFTMLELAETVKELIN-PGIEIKMVENTPDDPRQRKPDISKAKEL 313
G V +IG E T LEL E + E P I V + R+ D SK
Sbjct: 233 GAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGE 292
Query: 314 LGWEPKVKLRDGLPLMEEDFRS 335
LG+ P+V DG+ +R+
Sbjct: 293 LGYRPRVDFTDGIAETVAWYRA 314
>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis
(strain 168) GN=ytcB PE=3 SV=1
Length = 316
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 147/313 (46%), Gaps = 27/313 (8%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-----FTGSKDNLKKWIGHPRFELIR 84
M+ILVTG AGFIGSHL ++L++++K+ VI D++ F+ NLK + RF I+
Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60
Query: 85 HDV----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--R 138
++ LL VD I+HLA N + I L L A R +
Sbjct: 61 ENLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQT 120
Query: 139 ILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIA 198
+ STS VYG+ T ++P GV K E L Y + GI I I
Sbjct: 121 FVFASTSSVYGEKQGKVSENTSLSPLSPYGVT------KLTGEKLCHVYKQSFGIPIVIL 174
Query: 199 RIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME-- 256
R F YGPR D I Q L+ +PLT+ G Q+R F Y+SD V G+ ++
Sbjct: 175 RFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKP 232
Query: 257 ---GENTGPVNIGNPGEFTMLELAETVKELINPGIEIKMVENTPDDPRQRKPDISKAKEL 313
GE VNIG ++L++ ++++ + + +P DISKAK+L
Sbjct: 233 HLIGET---VNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAGEPSNTWADISKAKQL 289
Query: 314 LGWEPKVKLRDGL 326
L ++P L+DGL
Sbjct: 290 LHYDPATSLKDGL 302
>sp|Q6D2F1|ARNA_ERWCT Bifunctional polymyxin resistance protein ArnA OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=arnA PE=3 SV=1
Length = 673
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 163/354 (46%), Gaps = 42/354 (11%)
Query: 23 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFEL 82
S+ + R+L+ G GFIG+HL ++L+ +++ E+ D S D + +++G PRF
Sbjct: 316 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 371
Query: 83 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 136
+ D++ E + + D I L A+PI Y NP++ + + L ++ R
Sbjct: 372 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 431
Query: 137 ARILLTSTSEVYG---DPLIHPQPETYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHG 192
RI+ STSEVYG D +T V PI R Y K++ + +++ Y ++G
Sbjct: 432 KRIVFPSTSEVYGMCDDKEF--DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKNG 489
Query: 193 IQIRIARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSD 246
++ + R FN GPR++ I R ++ I + G P+ + G Q R F + D
Sbjct: 490 LRFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHD 549
Query: 247 MVDGLIRLMEGENTGP----VNIGNP-GEFTMLELAETVKELIN---------PGIEIKM 292
++ L R++E N +NIGNP E ++ EL E + N P
Sbjct: 550 GIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDRFPPFAGFID 609
Query: 293 VENTP------DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVP 340
VE++ D R P I AK LL WEP VK+ + + F + VP
Sbjct: 610 VESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRTVDVP 663
>sp|A8GDR7|ARNA_SERP5 Bifunctional polymyxin resistance protein ArnA OS=Serratia
proteamaculans (strain 568) GN=arnA PE=3 SV=1
Length = 660
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 158/329 (48%), Gaps = 42/329 (12%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ +++ ++ D GS D + +++G+PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLRDDRYDIYGLD---IGS-DAISRFLGNPRFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPST 432
Query: 145 SEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
SEVYG G +N R Y K++ + +++ Y + G++ + R
Sbjct: 433 SEVYGMCDDKEFDEDHSRLIVGPINK--QRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRP 490
Query: 201 FNTYGPRM-NIDDGRV-----VSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
FN GPR+ N+D R+ ++ I + G P+ + G Q R F ++D ++ L R+
Sbjct: 491 FNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQKRCFTDINDGIEALFRI 550
Query: 255 MEGE----NTGPVNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP--- 297
+E + VNIGNP E ++ ELAE + E N P K VE++
Sbjct: 551 IENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDRFPPFAGFKDVESSSYYG 610
Query: 298 ---DDPRQRKPDISKAKELLGWEPKVKLR 323
D R P I A+ LL W+P + ++
Sbjct: 611 KGYQDVEHRTPSIKNARRLLDWQPTIAMQ 639
>sp|A6TF98|ARNA_KLEP7 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella
pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=arnA PE=3 SV=1
Length = 661
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 160/330 (48%), Gaps = 42/330 (12%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L++++ E+ D GS D + +++ PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNYEIYGLD---IGS-DAISRFLDCPRFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPST 432
Query: 145 SEVYG---DPLIHPQPETYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
SEVYG D V PI R Y K++ + +++ Y ++G++ + R
Sbjct: 433 SEVYGMCTDKNFDEDSSNL--VVGPINKQRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRP 490
Query: 201 FNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
FN GPR++ I R ++ I + G P+ + + G Q R F +SD ++ L R+
Sbjct: 491 FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRI 550
Query: 255 ME---GENTGP-VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVENTP--- 297
+E G G +NIGNP E ++ ELAE +++ P + VE++
Sbjct: 551 IENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYG 610
Query: 298 ---DDPRQRKPDISKAKELLGWEPKVKLRD 324
D RKP I AK L WEPKV++ +
Sbjct: 611 KGYQDVEHRKPSIRNAKRCLNWEPKVEMEE 640
>sp|C6DAW5|ARNA_PECCP Bifunctional polymyxin resistance protein ArnA OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3
SV=1
Length = 672
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 157/336 (46%), Gaps = 42/336 (12%)
Query: 23 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFEL 82
S+ + R+L+ G GFIG+HL ++L+ +++ E+ D S D + +++G PRF
Sbjct: 315 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 370
Query: 83 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 136
+ D++ E + + D I L A+PI Y NP++ + + L ++ R
Sbjct: 371 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 430
Query: 137 ARILLTSTSEVYG---DPLIHPQPETYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHG 192
RI+ STSEVYG D +T V PI R Y K++ + +++ Y ++G
Sbjct: 431 KRIVFPSTSEVYGMCDDKEF--DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKNG 488
Query: 193 IQIRIARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSD 246
++ + R FN GPR++ I R ++ I + G P+ + G Q R F + D
Sbjct: 489 LRFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHD 548
Query: 247 MVDGLIRLMEGENTGP----VNIGNP-GEFTMLELAETVKELIN---------PGIEIKM 292
++ L R++E N +NIGNP E ++ EL + + N P
Sbjct: 549 GIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGDMLLTSFNAHPLRDRFPPFAGFIE 608
Query: 293 VENTP------DDPRQRKPDISKAKELLGWEPKVKL 322
VE++ D R P I AK LL WEP VK+
Sbjct: 609 VESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKM 644
>sp|A0KGY6|ARNA_AERHH Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=arnA PE=3 SV=1
Length = 663
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 38/328 (11%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+++ EV D GS + ++IGHP F + D++
Sbjct: 319 RVLILGVNGFIGNHLTERLLQDGGYEVYGLD---IGSS-AVDRFIGHPNFHFVEGDISIH 374
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYHKRIIFPST 434
Query: 145 SEVYGDPLIHPQPE-TYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
SEVYG H E + V PI R Y K++ + +++ Y ++ G+ + R FN
Sbjct: 435 SEVYGMCDDHSFDEDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFN 494
Query: 203 TYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++E
Sbjct: 495 WMGPRLDSLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQKRCFTDIEDGIEALFRIIE 554
Query: 257 GE----NTGPVNIGNP-GEFTMLELAET---------VKELINPGIEIKMVENTP----- 297
+ + +NIGNP E ++ ++AE +++ P K+VE+
Sbjct: 555 NKENRCDGQIINIGNPDNEASIQQMAEILLAKFEAHPLRDHFPPFAGFKLVESKSFYGDG 614
Query: 298 -DDPRQRKPDISKAKELLGWEPKVKLRD 324
D R+P I+ A+ LL WEP +++ +
Sbjct: 615 YQDVSHRRPSIANARRLLDWEPTIEMEE 642
>sp|B5FNT9|ARNA_SALDC Bifunctional polymyxin resistance protein ArnA OS=Salmonella dublin
(strain CT_02021853) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ EG+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + V +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAER 658
>sp|B4SYX1|ARNA_SALNS Bifunctional polymyxin resistance protein ArnA OS=Salmonella
newport (strain SL254) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ EG+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + V +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAER 658
>sp|C0Q069|ARNA_SALPC Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi C (strain RKS4594) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ EG+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + V +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAER 658
>sp|A4WAM3|ARNA_ENT38 Bifunctional polymyxin resistance protein ArnA OS=Enterobacter sp.
(strain 638) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 42/328 (12%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L++++ EV D GS D + ++IG+ RF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNFEVYGLD---IGS-DAISRFIGNSRFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPST 432
Query: 145 SEVYG---DPLIHPQPETYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIQIRIARI 200
SEVYG D + V PI R Y K++ + +++ Y + G++ + R
Sbjct: 433 SEVYGMCSDKVFDEDHSNLI--VGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRP 490
Query: 201 FNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRL 254
FN GPR++ I R ++ I + G P+ + G Q R F +SD ++ L R+
Sbjct: 491 FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQKRCFTDISDGIEALFRI 550
Query: 255 MEGENTGP----VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVENTP--- 297
+E +N+ +NIGNP E ++ ELAE ++ P + VE++
Sbjct: 551 IENKNSNCDGQIINIGNPDNEASIKELAEMLLASFEKHPLRNHFPPFAGFREVESSTYYG 610
Query: 298 ---DDPRQRKPDISKAKELLGWEPKVKL 322
D RKP I A L+ W P V++
Sbjct: 611 KGYQDVEHRKPSIRNAHRLISWTPTVEM 638
>sp|B5XTK9|ARNA_KLEP3 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella
pneumoniae (strain 342) GN=arnA PE=3 SV=1
Length = 661
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 160/328 (48%), Gaps = 38/328 (11%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L++++ E+ D GS D + +++ PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNYEIYGLD---IGS-DAISRFLESPRFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPST 432
Query: 145 SEVYGDPLIHPQPE-TYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFN 202
SEVYG E T V PI R Y K++ + +++ Y ++ ++ + R FN
Sbjct: 433 SEVYGMCTDKNFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKYDLKFTLFRPFN 492
Query: 203 TYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLME 256
GPR++ I R ++ I + G P+ + + G Q R F +SD ++ L R++E
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIE 552
Query: 257 ---GENTGP-VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVENTP----- 297
G G +NIGNP E ++ ELAE +++ P + VE++
Sbjct: 553 NKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKG 612
Query: 298 -DDPRQRKPDISKAKELLGWEPKVKLRD 324
D RKP I AK L WEPKV++ +
Sbjct: 613 YQDVEHRKPSIRNAKRCLNWEPKVEMEE 640
>sp|B4ETL7|ARNA_PROMH Bifunctional polymyxin resistance protein ArnA OS=Proteus mirabilis
(strain HI4320) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 158/330 (47%), Gaps = 44/330 (13%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+++ ++ D GS ++++IG+PRF I DV+
Sbjct: 317 RVLILGVNGFIGNHLTERLLKDGNYDIYGMD---IGSS-AIERFIGNPRFHFIEGDVSIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN----VNPIG-VRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
SEVYG + E N V PI R Y K++ + +++ Y + G++ + R
Sbjct: 433 SEVYG---MCDDKEFDEDNSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F ++D ++ L R
Sbjct: 490 PFNWMGPRLDNLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDINDGIEALFR 549
Query: 254 LMEGENTGP----VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++E + +NIGNP E ++ ELAE + + P K +E++
Sbjct: 550 IIENRDNKCDGQIINIGNPTNEASIRELAEMLLDCFEKHELRGHFPPFAGFKKIESSSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLR 323
D RKP I A+ LL W+P ++ R
Sbjct: 610 GKGYQDVEHRKPSIKNAERLLDWKPTIETR 639
>sp|B4TBG6|ARNA_SALHS Bifunctional polymyxin resistance protein ArnA OS=Salmonella
heidelberg (strain SL476) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ +G+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + V +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAER 658
>sp|B5RCC4|ARNA_SALG2 Bifunctional polymyxin resistance protein ArnA OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=arnA PE=3
SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILSLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ +G+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + V +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAER 658
>sp|Q1R9G0|ARNA_ECOUT Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain UTI89 / UPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETI 642
>sp|A1ADA7|ARNA_ECOK1 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O1:K1 / APEC GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETI 642
>sp|B7MG22|ARNA_ECO45 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETI 642
>sp|B5R272|ARNA_SALEP Bifunctional polymyxin resistance protein ArnA OS=Salmonella
enteritidis PT4 (strain P125109) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ +G+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + V +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAER 658
>sp|A9N5B2|ARNA_SALPB Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=arnA PE=3
SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ +G+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + V +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAER 658
>sp|B7MXT6|ARNA_ECO81 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O81 (strain ED1a) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFMNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETI 642
>sp|B7NNT4|ARNA_ECO7I Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETI 642
>sp|B5EZH8|ARNA_SALA4 Bifunctional polymyxin resistance protein ArnA OS=Salmonella agona
(strain SL483) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ +G+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + V +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAER 658
>sp|B7UFR7|ARNA_ECO27 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLIDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETI 642
>sp|Q8FFM1|ARNA_ECOL6 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=arnA PE=3
SV=1
Length = 660
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFMNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETI 642
>sp|B1LLK9|ARNA_ECOSM Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 52/335 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRD 324
+ D RKP I A+ L WEPK+ +++
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQE 640
>sp|A4SQW9|ARNA_AERS4 Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
salmonicida (strain A449) GN=arnA PE=3 SV=1
Length = 663
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 40/329 (12%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+++ + E+ D S L ++I HP F + D++
Sbjct: 319 RVLILGVNGFIGNHLTERLLKDGRYEIYGLDI----SASALGRFIDHPHFHFVEGDISIH 374
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPST 434
Query: 145 SEVYG--DPLIHPQPETYWGNVNPI-GVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIF 201
SEVYG D + E+ V PI R Y K++ + +++ Y ++ G+ + R F
Sbjct: 435 SEVYGMCDDHSFDEDESRL-IVGPIHKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPF 493
Query: 202 NTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIRLM 255
N GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 494 NWMGPRLDSLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQKRCFTDIEDGIEALFRII 553
Query: 256 EGE----NTGPVNIGNP-GEFTMLELAET---------VKELINPGIEIKMVENTP---- 297
E + + +NIG+P E ++L++AE ++ P K VE+
Sbjct: 554 ENKGNRCDGQIINIGSPDNEASILQMAEVLLGKFEAHPLRHHFPPFAGFKRVESKSFYGD 613
Query: 298 --DDPRQRKPDISKAKELLGWEPKVKLRD 324
D R+P I A+ LL WEP +++ +
Sbjct: 614 GYQDVSHRRPSIKNARRLLDWEPTIEMEE 642
>sp|B7LM76|ARNA_ESCF3 Bifunctional polymyxin resistance protein ArnA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 157/338 (46%), Gaps = 46/338 (13%)
Query: 27 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 86
Q R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D
Sbjct: 313 QRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLTHPNFHFVEGD 368
Query: 87 VT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 140
++ E + + D + L A+PI Y NP++ + + L ++ + RI+
Sbjct: 369 ISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVQYHKRII 428
Query: 141 LTSTSEVYG---DPLIHPQPETYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIR 196
STSEVYG D V PI R Y K++ + +++ Y + G+Q
Sbjct: 429 FPSTSEVYGMCTDKFFDEDHSNLI--VGPINKPRWIYSVSKQLLDRVIWAYGEKEGLQFT 486
Query: 197 IARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDG 250
+ R FN GPR++ I R ++ I + G P+ + G Q R F + D ++
Sbjct: 487 LFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA 546
Query: 251 LIRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVE 294
L R++ ENTG +NIGNP E ++ EL + +++ P ++VE
Sbjct: 547 LYRII--ENTGNRCDGEIINIGNPDNEASIEELGKMLLASFDKHPLRQHFPPFAGFRVVE 604
Query: 295 NTP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
++ D RKP I A+ L WEP + +++ +
Sbjct: 605 SSSYYGKGYQDVEHRKPSIRNARRCLDWEPTIDMQETI 642
>sp|O52325|ARNA_SALTY Bifunctional polymyxin resistance protein ArnA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=arnA PE=2 SV=1
Length = 660
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ +G+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + + +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDIAER 658
>sp|Q3YZV1|ARNA_SHISS Bifunctional polymyxin resistance protein ArnA OS=Shigella sonnei
(strain Ss046) GN=arnA PE=3 SV=1
Length = 660
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETI 642
>sp|P0C0R6|ARNA_SALCH Bifunctional polymyxin resistance protein ArnA OS=Salmonella
choleraesuis (strain SC-B67) GN=arnA PE=3 SV=1
Length = 660
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L+ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLSAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ EG+ +NIGNP E ++ ELA + + + P ++V +
Sbjct: 550 IIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVASRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ LGWEP + +RD + + F + V +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAER 658
>sp|Q8Z540|ARNA_SALTI Bifunctional polymyxin resistance protein ArnA OS=Salmonella typhi
GN=arnA PE=3 SV=1
Length = 660
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L++ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLDEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ EG+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ L WEP + +RD + + F + + +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAER 658
>sp|B5BCP6|ARNA_SALPK Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1
Length = 660
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L++ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLDEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ EG+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ L WEP + +RD + + F + + +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAER 658
>sp|Q5PNA6|ARNA_SALPA Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=arnA PE=3
SV=1
Length = 660
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 30 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT- 88
+R+L+ G GFIG+HL ++L++ E EV D GS + + +++ HPRF + D++
Sbjct: 316 IRVLILGVNGFIGNHLTERLLDEENYEVYGMD---IGS-NAISRFLLHPRFHFVEGDISI 371
Query: 89 -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 143
E + + D + L A+PI Y NP++ + + L ++ + R++ S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 431
Query: 144 TSEVYG----DPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIAR 199
TSEVYG + G VN R Y K++ + +++ Y + G++ + R
Sbjct: 432 TSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFR 489
Query: 200 IFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGLIR 253
FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L R
Sbjct: 490 PFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFR 549
Query: 254 LM--EGENTGP--VNIGNP-GEFTMLELAETVKELIN---------PGIEIKMVENTP-- 297
++ EG+ +NIGNP E ++ ELA + + + P ++VE+
Sbjct: 550 IIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYY 609
Query: 298 ----DDPRQRKPDISKAKELLGWEPKVKLRDGLPLMEEDFRSRLGVPKR 342
D RKP I A+ L WEP + +RD + + F + + +R
Sbjct: 610 GKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAER 658
>sp|B7N5M0|ARNA_ECOLU Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETI 642
>sp|Q0TFI7|ARNA_ECOL5 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 157/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLCEDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A+ L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETI 642
>sp|B5YXP8|ARNA_ECO5E Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=arnA PE=3 SV=1
Length = 660
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNAHHCLDWEPKIDMQETI 642
>sp|Q8XDZ3|ARNA_ECO57 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O157:H7 GN=arnA PE=3 SV=1
Length = 660
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNAHHCLDWEPKIDMQETI 642
>sp|Q32DT3|ARNA_SHIDS Bifunctional polymyxin resistance protein ArnA OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=arnA PE=3 SV=2
Length = 660
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETI 642
>sp|Q31YK2|ARNA_SHIBS Bifunctional polymyxin resistance protein ArnA OS=Shigella boydii
serotype 4 (strain Sb227) GN=arnA PE=3 SV=1
Length = 660
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETI 642
>sp|P77398|ARNA_ECOLI Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12) GN=arnA PE=1 SV=1
Length = 660
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETI 642
>sp|B1IXT2|ARNA_ECOLC Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=arnA PE=3 SV=1
Length = 660
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETI 642
>sp|B1X8W8|ARNA_ECODH Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12 / DH10B) GN=arnA PE=3 SV=1
Length = 660
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 52/337 (15%)
Query: 31 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVT-- 88
R+L+ G GFIG+HL ++L+ + EV D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 89 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 145 SEVYGDPLIHPQPETYWGN------VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIQIRI 197
SEVYG + Y+ V P+ R Y K++ + +++ Y + G+Q +
Sbjct: 433 SEVYG-----MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487
Query: 198 ARIFNTYGPRMN------IDDGRVVSNFIAQALRGEPLTVQKPGTQTRSFCYVSDMVDGL 251
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547
Query: 252 IRLMEGENTGP------VNIGNP-GEFTMLELAET---------VKELINPGIEIKMVEN 295
R++ EN G +NIGNP E ++ EL E ++ P ++VE+
Sbjct: 548 YRII--ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 605
Query: 296 TP------DDPRQRKPDISKAKELLGWEPKVKLRDGL 326
+ D RKP I A L WEPK+ +++ +
Sbjct: 606 SSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETI 642
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,026,910
Number of Sequences: 539616
Number of extensions: 6344332
Number of successful extensions: 16977
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 15862
Number of HSP's gapped (non-prelim): 708
length of query: 343
length of database: 191,569,459
effective HSP length: 118
effective length of query: 225
effective length of database: 127,894,771
effective search space: 28776323475
effective search space used: 28776323475
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)