BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019277
(343 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PI7|A Chain A, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
pdb|2PI7|B Chain B, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
Length = 312
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 136/244 (55%), Gaps = 16/244 (6%)
Query: 85 VNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPH 144
+N KNRYT+ILP+D +RV L + YINA+ I +S + ++IATQGPLP
Sbjct: 57 MNRCKNRYTNILPYDFSRVRLVSMNE--EEGSDYINANYIPGYNSPQ--EYIATQGPLPE 112
Query: 145 TYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET 204
T DFW+MV+Q +IVMLT+ + + VKC Y+ + P +G+I V + T
Sbjct: 113 TRNDFWKMVLQQKSQIIVMLTQ-CNEKRRVKCDHYWPFTEDPIAYGDI-TVEMLSEEEHT 170
Query: 205 ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP----PNFG 260
V RN ++Y + + V+H Y WPDHGVP A IL+ + + + G
Sbjct: 171 DWVYRNFRISYADEVQ---DVMHFNYTAWPDHGVPTAN-AAESILQFVQMVRQKSVKSKG 226
Query: 261 PIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFC 320
P+++HCSAG+GRTG + + +Q I D +D+ V RS R+ MVQT EQYIF
Sbjct: 227 PMIIHCSAGVGRTGTFIALDWLLQHI--RDHEFVDILGLVSDMRSYRMSMVQTEEQYIFI 284
Query: 321 HQAI 324
HQ +
Sbjct: 285 HQCV 288
>pdb|2G59|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
pdb|2G59|B Chain B, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
Length = 297
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 137/244 (56%), Gaps = 16/244 (6%)
Query: 85 VNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPH 144
+N KNRYT+ILP+D +RV L + A YINA+ I +S + ++IATQGPLP
Sbjct: 50 LNRCKNRYTNILPYDFSRVRLVSMNEEEGA--DYINANYIPGYNSPQ--EYIATQGPLPE 105
Query: 145 TYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET 204
T DFW+MV+Q +IVMLT+ + + VKC Y+ + P +G+I V + +
Sbjct: 106 TRNDFWKMVLQQKSQIIVMLTQ-CNEKRRVKCDHYWPFTEEPIAYGDI-TVEMISEEEQD 163
Query: 205 ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL----PPNFG 260
R+ +NY + + V+H Y WPDHGVP A IL+ ++ + + G
Sbjct: 164 DWACRHFRINYADEMQ---DVMHFNYTAWPDHGVPTAN-AAESILQFVHMVRQQATKSKG 219
Query: 261 PIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFC 320
P+++HCSAG+GRTG + + +Q I D +D+ V RS R+ MVQT EQYIF
Sbjct: 220 PMIIHCSAGVGRTGTFIALDRLLQHI--RDHEFVDILGLVSEMRSYRMSMVQTEEQYIFI 277
Query: 321 HQAI 324
HQ +
Sbjct: 278 HQCV 281
>pdb|2GJT|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptpro
pdb|2GJT|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptpro
Length = 295
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 137/244 (56%), Gaps = 16/244 (6%)
Query: 85 VNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPH 144
+N KNRYT+ILP+D +RV L + A YINA+ I +S + ++IATQGPLP
Sbjct: 48 LNRCKNRYTNILPYDFSRVRLVSMNEEEGA--DYINANYIPGYNSPQ--EYIATQGPLPE 103
Query: 145 TYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET 204
T DFW+MV+Q +IVMLT+ + + VKC Y+ + P +G+I V + +
Sbjct: 104 TRNDFWKMVLQQKSQIIVMLTQ-CNEKRRVKCDHYWPFTEEPIAYGDI-TVEMISEEEQD 161
Query: 205 ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL----PPNFG 260
R+ +NY + + V+H Y WPDHGVP A IL+ ++ + + G
Sbjct: 162 DWACRHFRINYADEMQ---DVMHFNYTAWPDHGVPTAN-AAESILQFVHMVRQQATKSKG 217
Query: 261 PIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFC 320
P+++HCSAG+GRTG + + +Q I D +D+ V RS R+ MVQT EQYIF
Sbjct: 218 PMIIHCSAGVGRTGTFIALDRLLQHI--RDHEFVDILGLVSEMRSYRMSMVQTEEQYIFI 275
Query: 321 HQAI 324
HQ +
Sbjct: 276 HQCV 279
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 19/291 (6%)
Query: 48 EKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQ 107
E N S++F +Q S ++M + N KNRY +IL +D +RV L+
Sbjct: 21 ELYSNNQHGFSEDFEEVQRS---TADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRP 77
Query: 108 CKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRL 167
YINA+ + K +IATQGPL T+EDFW M+ + + +IVM+T L
Sbjct: 78 LPGKDSKHSDYINANYVD--GYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNL 135
Query: 168 VDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKT----TETALVLRNLEVNYKESEEPPM 223
V+ + KC Y+ E+ E+GNI + K K T +RN +V + P
Sbjct: 136 VEKGRR-KCDQYWPTEN-TEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKG 193
Query: 224 S-----VLHIQYPEWPDHGVPRDTLAVREILKRIYNLP-PNFGPIVVHCSAGIGRTGAYC 277
V+ Y +WPD GVP L V ++R P GP++VHCSAG+GRTG Y
Sbjct: 194 RQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYI 253
Query: 278 TIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDEL 328
I + +Q+I D S +++ +K R+QR +VQT EQYIF H A+++ +
Sbjct: 254 VIDSMLQQI--KDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAI 302
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 149/289 (51%), Gaps = 21/289 (7%)
Query: 53 KSREISQEFARLQAS----------RIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNR 102
K + F +LQA +K + C +AL N KNRY +ILP+D R
Sbjct: 24 KINQFEGHFMKLQADSNYLLSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATR 83
Query: 103 VVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIV 162
V L D YINAS I ++ + ++I TQGPLP T +DFW+MV + + IV
Sbjct: 84 VKLSNVDD--DPCSDYINASYIPGNNFRR--EYIVTQGPLPGTKDDFWKMVWEQNVHNIV 139
Query: 163 MLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPP 222
M+T+ V+ + VKC Y+ A+ +G++ I+ ++ +R ++ +E +
Sbjct: 140 MVTQCVEKGR-VKCDHYWPADQDSLYYGDL-ILQMLSESVLPEWTIREFKICGEEQLDAH 197
Query: 223 MSVLHIQYPEWPDHGVPRDTLAVREILKRI---YNLPPNFGPIVVHCSAGIGRTGAYCTI 279
+ H Y WPDHGVP T ++ + ++ + N P GP VVHCSAG+GRTG + +
Sbjct: 198 RLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIAL 257
Query: 280 HNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDEL 328
+Q++ D ++D+ V R R+ MVQT QY++ HQ + D L
Sbjct: 258 DRILQQLDSKD--SVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVL 304
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 136/253 (53%), Gaps = 16/253 (6%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N KNRY +IL +D +RV L+ YINA+ + K +IATQGPL T
Sbjct: 56 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVD--GYNKAKAYIATQGPLKST 113
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKT---- 201
+EDFW M+ + + +IVM+T LV+ + KC Y+ E+ E+GNI + K K
Sbjct: 114 FEDFWRMIWEQNTGIIVMITNLVEKGRR-KCDQYWPTENS-EEYGNIIVTLKSTKIHACY 171
Query: 202 TETALVLRNLEVNYKESEEPPMS-----VLHIQYPEWPDHGVPRDTLAVREILKRIYNLP 256
T +RN +V + P V+ Y +WPD GVP L V ++R
Sbjct: 172 TVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR 231
Query: 257 -PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTME 315
P GP++VHCSAG+GRTG Y I + +Q+I D S +++ +K R+QR +VQT E
Sbjct: 232 MPETGPVLVHCSAGVGRTGTYIVIDSMLQQI--KDKSTVNVLGFLKHIRTQRNYLVQTEE 289
Query: 316 QYIFCHQAIVDEL 328
QYIF H A+++ +
Sbjct: 290 QYIFIHDALLEAI 302
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 136/253 (53%), Gaps = 16/253 (6%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N KNRY +IL +D +RV L+ YINA+ + K +IATQGPL T
Sbjct: 67 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVD--GYNKAKAYIATQGPLKST 124
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKT---- 201
+EDFW M+ + + +IVM+T LV+ + KC Y+ E+ E+GNI + K K
Sbjct: 125 FEDFWRMIWEQNTGIIVMITNLVEKGRR-KCDQYWPTENS-EEYGNIIVTLKSTKIHACY 182
Query: 202 TETALVLRNLEVNYKESEEPPMS-----VLHIQYPEWPDHGVPRDTLAVREILKRIYNLP 256
T +RN +V + P V+ Y +WPD GVP L V ++R
Sbjct: 183 TVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR 242
Query: 257 -PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTME 315
P GP++VHCSAG+GRTG Y I + +Q+I D S +++ +K R+QR +VQT E
Sbjct: 243 MPETGPVLVHCSAGVGRTGTYIVIDSMLQQI--KDKSTVNVLGFLKHIRTQRNYLVQTEE 300
Query: 316 QYIFCHQAIVDEL 328
QYIF H A+++ +
Sbjct: 301 QYIFIHDALLEAI 313
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 136/253 (53%), Gaps = 16/253 (6%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N KNRY +IL +D +RV L+ YINA+ + K +IATQGPL T
Sbjct: 49 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVD--GYNKAKAYIATQGPLKST 106
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKT---- 201
+EDFW M+ + + +IVM+T LV+ + KC Y+ E+ E+GNI + K K
Sbjct: 107 FEDFWRMIWEQNTGIIVMITNLVEKGRR-KCDQYWPTENS-EEYGNIIVTLKSTKIHACY 164
Query: 202 TETALVLRNLEVNYKESEEPP-----MSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP 256
T +RN +V + P V+ Y +WPD GVP L V ++R
Sbjct: 165 TVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR 224
Query: 257 -PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTME 315
P GP++VHCSAG+GRTG Y I + +Q+I D S +++ +K R+QR +VQT E
Sbjct: 225 MPETGPVLVHCSAGVGRTGTYIVIDSMLQQI--KDKSTVNVLGFLKHIRTQRNYLVQTEE 282
Query: 316 QYIFCHQAIVDEL 328
QYIF H A+++ +
Sbjct: 283 QYIFIHDALLEAI 295
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 26/258 (10%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARG--YINASLISTSSSEKVSQF 135
C A N KNR + ++P ++ RV L P +G YINAS I + ++F
Sbjct: 342 CFSAQKECNKEKNRNSSVVPSERARVGLAPL----PGMKGTDYINASYIM--GYYRSNEF 395
Query: 136 IATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-----QAEDGPREFG 190
I TQ PLPHT +DFW M+ ++ +IVML DN + + D F + E E
Sbjct: 396 IITQHPLPHTTKDFWRMIWDHNAQIIVMLP---DNQSLAE--DEFVYWPSREESMNCEAF 450
Query: 191 NIGIVTK--WIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVP-RDTLAVRE 247
+ +++K + E +++ + + + ++ + V H Q P+WP+ P T +
Sbjct: 451 TVTLISKDRLCLSNEEQIIIHDFILEATQ-DDYVLEVRHFQCPKWPNPDAPISSTFELIN 509
Query: 248 ILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQR 307
++K GP +VH G G C + Q++ + +A+D+ K+ R
Sbjct: 510 VIKE--EALTRDGPTIVHDEYGAVSAGMLCALTTLSQQL--ENENAVDVFQVAKMINLMR 565
Query: 308 IGMVQTMEQYIFCHQAIV 325
G+ +EQY F ++A++
Sbjct: 566 PGVFTDIEQYQFIYKAML 583
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 136/253 (53%), Gaps = 16/253 (6%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N KNRY +IL +D +RV L+ YINA+ + K +IATQGPL T
Sbjct: 57 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVD--GYNKAKAYIATQGPLKST 114
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKT---- 201
+EDFW M+ + + +IVM+T LV+ + KC Y+ E+ E+GNI + K K
Sbjct: 115 FEDFWRMIWEQNTGIIVMITNLVEKGRR-KCDQYWPTENS-EEYGNIIVTLKSTKIHACY 172
Query: 202 TETALVLRNLEVNYKESEEPPMS-----VLHIQYPEWPDHGVPRDTLAVREILKRIYNLP 256
T +RN +V + P V+ Y +WPD GVP L V ++R
Sbjct: 173 TVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR 232
Query: 257 -PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTME 315
P GP++VHCSAG+GRTG Y I + +Q+I D S +++ +K R+QR +VQT E
Sbjct: 233 MPETGPVLVHCSAGVGRTGTYIVIDSMLQQI--KDKSTVNVLGFLKHIRTQRNYLVQTEE 290
Query: 316 QYIFCHQAIVDEL 328
QYIF H A+++ +
Sbjct: 291 QYIFIHDALLEAI 303
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 151/284 (53%), Gaps = 17/284 (5%)
Query: 49 KLQNKSREI-SQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQ 107
KLQ S + S+E+ L K + C +AL N KNRY +ILP+D RV L
Sbjct: 18 KLQADSNYLLSKEYEEL-----KDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLSN 72
Query: 108 CKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRL 167
D YINAS I ++ + ++I TQGPLP T +DFW+MV + + IVM+T+
Sbjct: 73 VDD--DPCSDYINASYIPGNNFRR--EYIVTQGPLPGTKDDFWKMVWEQNVHNIVMVTQC 128
Query: 168 VDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLH 227
V+ + VKC Y+ A+ +G++ I+ ++ +R ++ +E + + H
Sbjct: 129 VEKGR-VKCDHYWPADQDSLYYGDL-ILQMLSESVLPEWTIREFKICGEEQLDAHRLIRH 186
Query: 228 IQYPEWPDHGVPRDTLAVREILKRI---YNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQ 284
Y WPDHGVP T ++ + ++ + N P GP VVHCSAG+GRTG + + +Q
Sbjct: 187 FHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQ 246
Query: 285 RILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDEL 328
++ D ++D+ V R R+ MVQT QY++ HQ + D L
Sbjct: 247 QLDSKD--SVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVL 288
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 136/253 (53%), Gaps = 16/253 (6%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N KNRY +IL +D +RV L+ YINA+ + K +IATQGPL T
Sbjct: 56 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVD--GYNKAKAYIATQGPLKST 113
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKT---- 201
+EDFW M+ + + +I+M+T LV+ + KC Y+ E+ E+GNI + K K
Sbjct: 114 FEDFWRMIWEQNTGIIIMITNLVEKGRR-KCDQYWPTEN-TEEYGNIIVTLKSTKIHACY 171
Query: 202 TETALVLRNLEVNYKESEEPPMS-----VLHIQYPEWPDHGVPRDTLAVREILKRIYNLP 256
T +RN +V + P V+ Y +WPD GVP L V ++R
Sbjct: 172 TVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR 231
Query: 257 -PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTME 315
P GP++VHCSAG+GRTG Y I + +Q+I D S +++ +K R+QR +VQT E
Sbjct: 232 MPETGPVLVHCSAGVGRTGTYIVIDSMLQQI--KDKSTVNVLGFLKHIRTQRNYLVQTEE 289
Query: 316 QYIFCHQAIVDEL 328
QYIF H A+++ +
Sbjct: 290 QYIFIHDALLEAI 302
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 149/289 (51%), Gaps = 26/289 (8%)
Query: 53 KSREISQEFARLQAS----------RIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNR 102
K + F +LQA +K + C +AL N KNRY +ILP+D R
Sbjct: 10 KINQFEGHFMKLQADSNYLLSKEYEELKDVGRNQSCDIALLPENRGKNRYNNILPYDATR 69
Query: 103 VVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIV 162
V L DY INAS I ++ + ++I TQGPLP T +DFW+MV + + IV
Sbjct: 70 VKLSGGSDY-------INASYIPGNNFRR--EYIVTQGPLPGTKDDFWKMVWEQNVHNIV 120
Query: 163 MLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPP 222
M+T+ V+ + VKC Y+ A+ +G++ I+ ++ +R ++ +E +
Sbjct: 121 MVTQCVEKGR-VKCDHYWPADQDSLYYGDL-ILQMLSESVLPEWTIREFKICGEEQLDAH 178
Query: 223 MSVLHIQYPEWPDHGVPRDTLAVREILKRI---YNLPPNFGPIVVHCSAGIGRTGAYCTI 279
+ H Y WPDHGVP T ++ + ++ + N P GP VVHCSAG+GRTG + +
Sbjct: 179 RLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFIAL 238
Query: 280 HNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDEL 328
+Q++ D ++D+ V R R+ MVQT QY++ HQ + D L
Sbjct: 239 DRILQQLDSKD--SVDIYGAVHDLRLHRVHMVQTECQYVYLHQCVRDVL 285
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 150/282 (53%), Gaps = 20/282 (7%)
Query: 48 EKLQ-NKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLK 106
E+L+ N S ++SQE+ I P + L+ N KNRY +++ +D +RV+L+
Sbjct: 24 ERLKANDSLKLSQEY-----ESIDPGQQFTWEHSNLEA-NKPKNRYANVIAYDHSRVILQ 77
Query: 107 QCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTR 166
+ YINA+ + + + +IATQGPLP T+ DFW MV + +VM+TR
Sbjct: 78 PLEGI--MGSDYINANYVD--GYRRQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTR 133
Query: 167 LVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETA-LVLRNLEVNYKESEEPPMSV 225
L + + +KC Y+ G +G I + + T E A +R ++ S E V
Sbjct: 134 LEEKSR-IKCDQYW-PNRGTETYGFIQVTL--LDTMELATFCVRTFSLHKNGSSE-KREV 188
Query: 226 LHIQYPEWPDHGVPRDTLAVREILKRIYNL-PPNFGPIVVHCSAGIGRTGAYCTIHNTVQ 284
H Q+ WPDHGVP L+R+ PP+ GPIVVHCSAG+GRTG + I ++
Sbjct: 189 RHFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLE 248
Query: 285 RILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
RI +D+ V + RSQR MVQT +QY F H+A+++
Sbjct: 249 RIKT--EKTVDVYGHVTLMRSQRNYMVQTEDQYGFIHEALLE 288
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 142/272 (52%), Gaps = 17/272 (6%)
Query: 60 EFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYI 119
EF RL +S+ + +R T +L N KNR +ILP++ +RV L+ + YI
Sbjct: 324 EFKRLASSK---AHTSRFITASLP-CNKFKNRLVNILPYESSRVCLQPIRGVE--GSDYI 377
Query: 120 NASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDY 179
NAS I +K +IATQGPL T EDFW + + + ++VMLT+L + + KC Y
Sbjct: 378 NASFIDGYRQQKA--YIATQGPLAETTEDFWRALWENNSTIVVMLTKLREMGRE-KCHQY 434
Query: 180 FQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVP 239
+ AE R +V + +LR +V + +V Q+ +WP+ G P
Sbjct: 435 WPAERSARY--QYFVVDPMAEYNMPQYILREFKVT-DARDGQSRTVRQFQFTDWPEQGAP 491
Query: 240 RDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDL 296
+ + + +++ F GPI VHCSAG+GRTG + T+ ++R+ +D+
Sbjct: 492 KSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRY--EGVVDI 549
Query: 297 ANTVKVFRSQRIGMVQTMEQYIFCHQAIVDEL 328
TVKV R+QR MVQT ++Y FC QA ++ L
Sbjct: 550 FQTVKVLRTQRPAMVQTEDEYQFCFQAALEYL 581
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 154/317 (48%), Gaps = 26/317 (8%)
Query: 21 SAVDFPPRI-SLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCT 79
+A D R+ L Q + + F++E + +E+ RL+ R +
Sbjct: 219 NAADIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPE--------- 269
Query: 80 VALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLIST---SSSEKVSQFI 136
N KNRY +ILPFD +RV+L Q +D YINA+ I E +I
Sbjct: 270 ------NKGKNRYKNILPFDHSRVIL-QGRDSNIPGSDYINANYIKNQLLGPDENAKTYI 322
Query: 137 ATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVT 196
A+QG L T DFW+M Q + VIVM TR V+ + KC Y+ R +G VT
Sbjct: 323 ASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRN-KCVPYWPEVGMQRAYGPYS-VT 380
Query: 197 KWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP 256
+ T LR L+V+ ++ + + H QY WPDHGVP + V L +I
Sbjct: 381 NCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQ 440
Query: 257 ---PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSA-LDLANTVKVFRSQRIGMVQ 312
P+ GPI+VHCSAGIGRTG I ++ I + +D+ T+++ R+QR GMVQ
Sbjct: 441 ESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQ 500
Query: 313 TMEQYIFCHQAIVDELE 329
T QY F + AI +E
Sbjct: 501 TEAQYKFIYVAIAQFIE 517
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 150/282 (53%), Gaps = 20/282 (7%)
Query: 48 EKLQ-NKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLK 106
E+L+ N S ++SQE+ I P + L+ VN KNRY +++ +D +RV+L+
Sbjct: 22 ERLKANDSLKLSQEY-----ESIDPGQQFTWEHSNLE-VNKPKNRYANVIAYDHSRVILQ 75
Query: 107 QCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTR 166
+ YINA+ + + + +IATQGPLP T+ DFW MV + IVM+TR
Sbjct: 76 PIEGI--MGSDYINANYVD--GYRRQNAYIATQGPLPETFGDFWRMVWEQRSATIVMMTR 131
Query: 167 LVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETA-LVLRNLEVNYKESEEPPMSV 225
L + + +KC Y+ G +G I + + T E A +R ++ S E V
Sbjct: 132 LEEKSR-IKCDQYW-PNRGTETYGFIQVTL--LDTIELATFCVRTFSLHKNGSSE-KREV 186
Query: 226 LHIQYPEWPDHGVPRDTLAVREILKRIYNL-PPNFGPIVVHCSAGIGRTGAYCTIHNTVQ 284
Q+ WPDHGVP L+R+ PP+ GPIVVHCSAG+GRTG + I ++
Sbjct: 187 RQFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLE 246
Query: 285 RILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
RI +D+ V + RSQR MVQT +QY F H+A+++
Sbjct: 247 RI--KPEKTVDVYGHVTLMRSQRNYMVQTEDQYSFIHEALLE 286
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 142/272 (52%), Gaps = 17/272 (6%)
Query: 60 EFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYI 119
EF RL S+ + +R + L N KNR +I+P++ RV L+ + YI
Sbjct: 322 EFKRLANSK---AHTSRFISANLP-CNKFKNRLVNIMPYESTRVCLQPIRGVE--GSDYI 375
Query: 120 NASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDY 179
NAS I +K +IATQGPL T EDFW M+ + + ++VMLT+L + + KC Y
Sbjct: 376 NASFIDGYRQQKA--YIATQGPLAETTEDFWRMLWENNSTIVVMLTKLREMGRE-KCHQY 432
Query: 180 FQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVP 239
+ AE R +V + +LR +V + +V Q+ +WP+ GVP
Sbjct: 433 WPAERSARY--QYFVVDPMAEYNMPQYILREFKVT-DARDGQSRTVRQFQFTDWPEQGVP 489
Query: 240 RDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDL 296
+ + + +++ F GPI VHCSAG+GRTG + T+ ++R+ +D+
Sbjct: 490 KSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRY--EGVVDI 547
Query: 297 ANTVKVFRSQRIGMVQTMEQYIFCHQAIVDEL 328
TVK+ R+QR MVQT ++Y FC+QA ++ L
Sbjct: 548 FQTVKMLRTQRPAMVQTEDEYQFCYQAALEYL 579
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 134/253 (52%), Gaps = 16/253 (6%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N KNRY +IL +D +RV L+ YINA+ + K +IATQGPL T
Sbjct: 57 NKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVD--GYNKAKAYIATQGPLKST 114
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKT---- 201
+EDFW + + + +IV +T LV+ + KC Y+ E+ E+GNI + K K
Sbjct: 115 FEDFWRXIWEQNTGIIVXITNLVEKGRR-KCDQYWPTENS-EEYGNIIVTLKSTKIHACY 172
Query: 202 TETALVLRNLEVNYKESEEPPMS-----VLHIQYPEWPDHGVPRDTLAVREILKRIYNL- 255
T +RN +V + P V+ Y +WPD GVP L V ++R
Sbjct: 173 TVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDXGVPEYALPVLTFVRRSSAAR 232
Query: 256 PPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTME 315
P GP++VHCSAG+GRTG Y I + +Q+I D S +++ +K R+QR +VQT E
Sbjct: 233 XPETGPVLVHCSAGVGRTGTYIVIDSXLQQI--KDKSTVNVLGFLKHIRTQRNYLVQTEE 290
Query: 316 QYIFCHQAIVDEL 328
QYIF H A+++ +
Sbjct: 291 QYIFIHDALLEAI 303
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 142/281 (50%), Gaps = 19/281 (6%)
Query: 59 QEFARLQASRIKPSEMARGCTVALDGV---NLSKNRYTDILPFDKNRVVLKQCKDYRPAA 115
+EF LQ +K L+G N KNRY +ILPFD +RV+L Q +D
Sbjct: 26 EEFESLQKQEVK------NLHQRLEGQRPENKGKNRYKNILPFDHSRVIL-QGRDSNIPG 78
Query: 116 RGYINASLIST---SSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYK 172
YINA+ I E +IA+QG L T DFW+M Q + VIVM TR V+ +
Sbjct: 79 SDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGR 138
Query: 173 MVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPE 232
KC Y+ R +G VT + T LR L+V+ ++ + + H QY
Sbjct: 139 N-KCVPYWPEVGMQRAYGPYS-VTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLS 196
Query: 233 WPDHGVPRDTLAVREILKRIYNLP---PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVG 289
WPDHGVP + V L +I P+ GPI+VHCSAGIGRTG I ++ I
Sbjct: 197 WPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTK 256
Query: 290 DMSA-LDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELE 329
+ +D+ T+++ R+QR GMVQT QY F + AI +E
Sbjct: 257 GLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIE 297
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 142/281 (50%), Gaps = 19/281 (6%)
Query: 59 QEFARLQASRIKPSEMARGCTVALDGV---NLSKNRYTDILPFDKNRVVLKQCKDYRPAA 115
+EF LQ +K L+G N KNRY +ILPFD +RV+L Q +D
Sbjct: 4 EEFESLQKQEVK------NLHQRLEGQRPENKGKNRYKNILPFDHSRVIL-QGRDSNIPG 56
Query: 116 RGYINASLIST---SSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYK 172
YINA+ I E +IA+QG L T DFW+M Q + VIVM TR V+ +
Sbjct: 57 SDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGR 116
Query: 173 MVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPE 232
KC Y+ R +G VT + T LR L+V+ ++ + + H QY
Sbjct: 117 N-KCVPYWPEVGMQRAYGPYS-VTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLS 174
Query: 233 WPDHGVPRDTLAVREILKRIYNLP---PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVG 289
WPDHGVP + V L +I P+ GPI+VHCSAGIGRTG I ++ I
Sbjct: 175 WPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTK 234
Query: 290 DMSA-LDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELE 329
+ +D+ T+++ R+QR GMVQT QY F + AI +E
Sbjct: 235 GLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIE 275
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 153/317 (48%), Gaps = 26/317 (8%)
Query: 21 SAVDFPPRI-SLTADQYNHCSEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCT 79
+A D R+ L Q + + F++E + +E+ RL+ R +
Sbjct: 219 NAADIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPE--------- 269
Query: 80 VALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLIST---SSSEKVSQFI 136
N KNRY +ILPFD +RV+L Q +D YINA+ I E +I
Sbjct: 270 ------NKGKNRYKNILPFDHSRVIL-QGRDSNIPGSDYINANYIKNQLLGPDENAKTYI 322
Query: 137 ATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVT 196
A+QG L T DFW+M Q + VIVM TR V+ + KC Y+ R +G VT
Sbjct: 323 ASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRN-KCVPYWPEVGMQRAYGPYS-VT 380
Query: 197 KWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP 256
+ T LR L+V+ ++ + + H QY WPDHGVP + V L +I
Sbjct: 381 NCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQ 440
Query: 257 ---PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSA-LDLANTVKVFRSQRIGMVQ 312
P+ GPI+VH SAGIGRTG I ++ I + +D+ T+++ R+QR GMVQ
Sbjct: 441 ESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQ 500
Query: 313 TMEQYIFCHQAIVDELE 329
T QY F + AI +E
Sbjct: 501 TEAQYKFIYVAIAQFIE 517
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 135/251 (53%), Gaps = 18/251 (7%)
Query: 80 VALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQ 139
VA N +KNRY +I+ +D +RV+L+ +D + YINA+ I ++ S +IATQ
Sbjct: 63 VAKKDQNRAKNRYGNIIAYDHSRVILQPVED--DPSSDYINANYID--GYQRPSHYIATQ 118
Query: 140 GPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWI 199
GP+ T DFW M+ Q IVM+T LV+ + VKC Y+ D +G+ + +
Sbjct: 119 GPVHETVYDFWRMIWQEQSACIVMVTNLVEVGR-VKCYKYWP--DDTEVYGDFKVTCVEM 175
Query: 200 KTTETALVLRNLEV---NYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRI-YNL 255
+ V+R + Y E E V + WPDHGVP + ++R+ +
Sbjct: 176 EPL-AEYVVRTFTLERRGYNEIRE----VKQFHFTGWPDHGVPYHATGLLSFIRRVKLSN 230
Query: 256 PPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTME 315
PP+ GPIVVHCSAG GRTG Y I + + +D+ N VK RS+RI MVQT E
Sbjct: 231 PPSAGPIVVHCSAGAGRTGCYIVI--DIMLDMAEREGVVDIYNCVKALRSRRINMVQTEE 288
Query: 316 QYIFCHQAIVD 326
QYIF H AI++
Sbjct: 289 QYIFIHDAILE 299
>pdb|1YGR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGU|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
pdb|1YGU|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
Length = 610
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 148/293 (50%), Gaps = 19/293 (6%)
Query: 38 HCSEALSFFKEKLQNKSREISQEFARLQASRIK-PSEMARGCTVALDGVNLSKNRYTDIL 96
H L +K K+ ++ R EF + K P + AR N +KNRY DIL
Sbjct: 11 HADILLETYKRKIADEGRPFLAEFQSIPRVFSKFPIKEAR------KPFNQNKNRYVDIL 64
Query: 97 PFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQY 156
P+D NRV L + A YINAS I + ++IA QGP T +DFW + +
Sbjct: 65 PYDYNRVELSEING--DAGSNYINASYIDGFKEPR--KYIAAQGPRDETVDDFWRXIWEQ 120
Query: 157 HCPVIVMLTRLVDNYKMVKCGDYFQA-EDGPREFGNIGIVTKWIKTTETALVLRNLEVNY 215
VIV +TR + + KC +Y+ + E+G R FG++ + K +++ L +
Sbjct: 121 KATVIVXVTRCEEGNRN-KCAEYWPSXEEGTRAFGDVVVKINQHKRC-PDYIIQKLNIVN 178
Query: 216 KESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNF--GPIVVHCSAGIGRT 273
K+ + V HIQ+ WPDHGVP D + ++ +R+ N NF GPIVVH SAG+GRT
Sbjct: 179 KKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRV-NAFSNFFSGPIVVHSSAGVGRT 237
Query: 274 GAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
G Y I ++ + + +D+ V R QR VQ QYI HQA+V+
Sbjct: 238 GTYIGIDAXLEGLEAEN--KVDVYGYVVKLRRQRCLXVQVEAQYILIHQALVE 288
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 46/298 (15%)
Query: 57 ISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAAR 116
+ EF RL + R R + N SKNR ++++P+D NRV LK + +
Sbjct: 321 LEAEFQRLPSYR-----SWRTQHIGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESE 375
Query: 117 -----------------GYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCP 159
YINAS I + +V IA QGPL T DFW+ + Q
Sbjct: 376 HDSDESSDDDSDSEEPSKYINASFIXSYWKPEVX--IAAQGPLKETIGDFWQXIFQRKVK 433
Query: 160 VIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESE 219
VIV LT L + + C Y+ +G + +G+I + K + T LR E+ + + +
Sbjct: 434 VIVXLTELKHGDQEI-CAQYWG--EGKQTYGDIEVDLKDTDKSST-YTLRVFELRHSKRK 489
Query: 220 EPPMSVLHIQYPEWPDHGV---PRDTLAVREILKRIYNLPPNFG----------PIVVHC 266
+ +V QY W + P++ ++ +++K+ LP P+++HC
Sbjct: 490 D-SRTVYQYQYTNWSVEQLPAEPKELISXIQVVKQ--KLPQKNSSEGNKHHKSTPLLIHC 546
Query: 267 SAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAI 324
G +TG +C + N ++ ++ +D+ VK R R+G V T EQY F + I
Sbjct: 547 RDGSQQTGIFCALLNLLESAETEEV--VDIFQVVKALRKARLGXVSTFEQYQFLYDVI 602
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 15/248 (6%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N+SKNRY DI P+D RV+LK +DY A YIN + S+S ++Q+IA QGPLPHT
Sbjct: 71 NISKNRYRDISPYDATRVILKGNEDYINA--NYINMEIPSSSI---INQYIACQGPLPHT 125
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETA 205
DFW+M + ++VMLT V+ + VKC Y+ G +G VT + TA
Sbjct: 126 CTDFWQMTWEQGSSMVVMLTTQVERGR-VKCHQYWPEPTGSSSYGCYQ-VTCHSEEGNTA 183
Query: 206 LVLRNLEV-NYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYN-LPPNFGPIV 263
+ R + + N +++E P++ IQY WPDHGVP D+ + + + N P+V
Sbjct: 184 YIFRKMTLFNQEKNESRPLT--QIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVV 241
Query: 264 VHCSAGIGRTGAYCTIHNTVQRILVGD-MSALDLANTVKVFRSQRIGMVQTMEQYIFCHQ 322
VHCSAGIGRTG T+ + I + LD+ V+ R QR M+QT QY F +
Sbjct: 242 VHCSAGIGRTGVLITMETAMCLIECNQPVYPLDI---VRTMRDQRAMMIQTPSQYRFVCE 298
Query: 323 AIVDELED 330
AI+ E+
Sbjct: 299 AILKVYEE 306
>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
Length = 299
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 127/243 (52%), Gaps = 11/243 (4%)
Query: 85 VNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPH 144
VN KNRY +++ +D +RV+L + Y+NA+ I K + +IATQG LP
Sbjct: 51 VNKPKNRYANVIAYDHSRVLLSAIEGI--PGSDYVNANYID--GYRKQNAYIATQGSLPE 106
Query: 145 TYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET 204
T+ DFW M+ + +VM+T+L + + VKC Y+ + G G + + + T E
Sbjct: 107 TFGDFWRMIWEQRSATVVMMTKLEERSR-VKCDQYWPSR-GTETHGLVQVTL--LDTVEL 162
Query: 205 ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL-PPNFGPIV 263
A YK V Q+ WPDHGVP L+R+ PP+ GP+V
Sbjct: 163 ATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAGPMV 222
Query: 264 VHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQA 323
VHCSAG+GRTG + I ++RI +D+ V + R+QR MVQT +QYIF H A
Sbjct: 223 VHCSAGVGRTGCFIVIDAMLERI--KHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDA 280
Query: 324 IVD 326
+++
Sbjct: 281 LLE 283
>pdb|4GRY|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GRZ|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Po4
Length = 288
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 141/281 (50%), Gaps = 19/281 (6%)
Query: 59 QEFARLQASRIKPSEMARGCTVALDGV---NLSKNRYTDILPFDKNRVVLKQCKDYRPAA 115
+EF LQ +K L+G N KNRY +ILPFD +RV+L Q +D
Sbjct: 6 EEFESLQKQEVK------NLHQRLEGQRPENKGKNRYKNILPFDHSRVIL-QGRDSNIPG 58
Query: 116 RGYINASLIST---SSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYK 172
YINA+ I E +IA+QG L T DFW+M Q + VIVM TR V+ +
Sbjct: 59 SDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGR 118
Query: 173 MVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPE 232
KC Y+ R +G VT + T LR L+V+ ++ + + H QY
Sbjct: 119 N-KCVPYWPEVGMQRAYGPYS-VTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLS 176
Query: 233 WPDHGVPRDTLAVREILKRIYNLP---PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVG 289
WPDHGVP + V L +I P+ GPI+VH SAGIGRTG I ++ I
Sbjct: 177 WPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTK 236
Query: 290 DMSA-LDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELE 329
+ +D+ T+++ R+QR GMVQT QY F + AI +E
Sbjct: 237 GLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIE 277
>pdb|1FPR|A Chain A, Crystal Structure Of The Complex Formed Between The
Catalytic Domain Of Shp-1 And An In Vitro Peptide
Substrate Py469 Derived From Shps-1
Length = 284
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 141/281 (50%), Gaps = 19/281 (6%)
Query: 59 QEFARLQASRIKPSEMARGCTVALDGV---NLSKNRYTDILPFDKNRVVLKQCKDYRPAA 115
+EF LQ +K L+G N KNRY +ILPFD +RV+L Q +D
Sbjct: 4 EEFESLQKQEVK------NLHQRLEGQRPENKGKNRYKNILPFDHSRVIL-QGRDSNIPG 56
Query: 116 RGYINASLIST---SSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYK 172
YINA+ I E +IA+QG L T DFW+M Q + VIVM TR V+ +
Sbjct: 57 SDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGR 116
Query: 173 MVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPE 232
KC Y+ R +G VT + T LR L+V+ ++ + + H QY
Sbjct: 117 N-KCVPYWPEVGMQRAYGPYS-VTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLS 174
Query: 233 WPDHGVPRDTLAVREILKRIYNLP---PNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVG 289
WPDHGVP + V L +I P+ GPI+VH SAGIGRTG I ++ I
Sbjct: 175 WPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTK 234
Query: 290 DMSA-LDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELE 329
+ +D+ T+++ R+QR GMVQT QY F + AI +E
Sbjct: 235 GLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIE 275
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 129/243 (53%), Gaps = 11/243 (4%)
Query: 85 VNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPH 144
VN KNRY +++ +D +RV+L D P + YINA+ I K + +IATQGPLP
Sbjct: 42 VNKPKNRYANVIAYDHSRVILTSI-DGVPGS-DYINANYID--GYRKQNAYIATQGPLPE 97
Query: 145 TYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET 204
T DFW MV + +VM+TRL + + VKC Y+ A G G I + + T E
Sbjct: 98 TMGDFWRMVWEQRTATVVMMTRLEEKSR-VKCDQYWPAR-GTETCGLIQVTL--LDTVEL 153
Query: 205 ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPP-NFGPIV 263
A +K + Q+ WPDHGVP + L+R+ P + GP+V
Sbjct: 154 ATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMV 213
Query: 264 VHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQA 323
VHCSAG+GRTG + I ++R+ +D+ V RSQR MVQT +QY+F H+A
Sbjct: 214 VHCSAGVGRTGCFIVIDAMLERM--KHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEA 271
Query: 324 IVD 326
+++
Sbjct: 272 LLE 274
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 130/246 (52%), Gaps = 13/246 (5%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N KNR +I+P++ RV L+ + YINAS + +K +IATQGPL +
Sbjct: 332 NKFKNRLVNIMPYELTRVCLQPIRGVE--GSDYINASFLDGYRQQKA--YIATQGPLAES 387
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETA 205
EDFW M+ +++ +IVMLT+L + + KC Y+ AE R +V +
Sbjct: 388 TEDFWRMLWEHNSTIIVMLTKLREMGRE-KCHQYWPAERSARY--QYFVVDPMAEYNMPQ 444
Query: 206 LVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNF---GPI 262
+LR +V + ++ Q+ +WP+ GVP+ + + +++ F GPI
Sbjct: 445 YILREFKVT-DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPI 503
Query: 263 VVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQ 322
VHCSAG+GRTG + T+ ++R+ +D+ TVK R+QR MVQT +QY C++
Sbjct: 504 TVHCSAGVGRTGVFITLSIVLERMRYE--GVVDMFQTVKTLRTQRPAMVQTEDQYQLCYR 561
Query: 323 AIVDEL 328
A ++ L
Sbjct: 562 AALEYL 567
>pdb|2OC3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Protein
Tyrosine Phosphatase Non-Receptor Type 18
Length = 303
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 150/291 (51%), Gaps = 25/291 (8%)
Query: 46 FKEKLQNKS-RE---ISQEFARLQASRIKPSEMARGCTVALDGV---NLSKNRYTDILPF 98
F E+L+ + RE ++ EF+ +QA + A G + G N+ KNRY D+LP+
Sbjct: 15 FLERLEARGGREGAVLAGEFSDIQAC--SAAWKADGVCSTVAGSRPENVRKNRYKDVLPY 72
Query: 99 DKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHC 158
D+ RV+L ++ YIN + I +IATQGPLPHT DFW +V ++
Sbjct: 73 DQTRVILSLLQE--EGHSDYINGNFIRGVDGSLA--YIATQGPLPHTLLDFWRLVWEFGV 128
Query: 159 PVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKES 218
VI+M R ++N + +C Y+ E P + G I K ++LR L+V +++
Sbjct: 129 KVILMACREIENGRK-RCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQKE 187
Query: 219 EEPPMSVLHIQYPEWPDHGVPRD---TLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGA 275
SV +QY WPD GVP LA+ E +R+ P P+ VHCSAG GRTG
Sbjct: 188 SR---SVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQGSGPE--PLCVHCSAGCGRTGV 242
Query: 276 YCTIHNTVQRILVGDMSALD--LANTVKVFRSQRIGMVQTMEQYIFCHQAI 324
CT+ + V+++L+ M D L + V R QR VQT EQY F + +
Sbjct: 243 LCTV-DYVRQLLLTQMIPPDFSLFDVVLKMRKQRPAAVQTEEQYRFLYHTV 292
>pdb|1P15|A Chain A, Crystal Structure Of The D2 Domain Of Rptpa
pdb|1P15|B Chain B, Crystal Structure Of The D2 Domain Of Rptpa
Length = 253
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 135/257 (52%), Gaps = 23/257 (8%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARG-----YINASLISTSSSEKVSQFIATQG 140
N+ KNR I+P++ NRV++ P RG Y+NAS I + +IA+QG
Sbjct: 9 NMKKNRVLQIIPYEFNRVII-------PVKRGEENTDYVNASFID--GYRQKDSYIASQG 59
Query: 141 PLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIK 200
PL HT EDFW M+ ++ IVMLT L + KC Y+ + DG +G+I + K +
Sbjct: 60 PLLHTIEDFWRMIWEWKSCSIVMLTEL-EERGQEKCAQYWPS-DGLVSYGDITVELKKEE 117
Query: 201 TTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFG 260
E+ V L N +E++ + H + WP+ G+P D + I+ + G
Sbjct: 118 ECESYTVRDLLVTNTRENKSRQIRQFH--FHGWPEVGIPSDGKGMINIIAAVQKQQQQSG 175
Query: 261 --PIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYI 318
PI VHCSAG GRTG +C + ++R+ + LD+ TVK R QR MVQT+EQY
Sbjct: 176 NHPITVHCSAGAGRTGTFCALSTVLERVKAEGI--LDVFQTVKSLRLQRPHMVQTLEQYE 233
Query: 319 FCHQAIVDELEDLISGF 335
FC++ +V E D S +
Sbjct: 234 FCYK-VVQEYIDAFSDY 249
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 35/294 (11%)
Query: 44 SFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRV 103
++FK++ + + ++E+ L+ I + A A N KNRY ++LP+D +RV
Sbjct: 33 AYFKKQQADSNCGFAEEYEDLKLIGISLPKYA-----AEIAENRGKNRYNNVLPYDISRV 87
Query: 104 VLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVM 163
L + YINA+ + S+K FIATQGPLP+T +DFW MV + + IVM
Sbjct: 88 KLSVQTH---STDDYINANYMPGYHSKK--DFIATQGPLPNTLKDFWRMVWEKNVYAIVM 142
Query: 164 LTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETAL---VLRNLEV-NYKESE 219
LT+ V+ + KC +Y+ ++ +++G+I + T+E L +R+ V N + SE
Sbjct: 143 LTKCVEQGR-TKCEEYWPSKQA-QDYGDITVAM----TSEVVLPEWTIRDFVVKNMQSSE 196
Query: 220 EPPMSVLHIQYPEWPDHGVPRDT-------LAVREILKRIYNLPPNFGPIVVHCSAGIGR 272
P+ H + WPDHGVP T VR+ +K+I PP PI+VHCSAG+GR
Sbjct: 197 SHPLRQFH--FTSWPDHGVPDTTDLLINFRYLVRDYMKQI---PPE-SPILVHCSAGVGR 250
Query: 273 TGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
TG + I + +I + + +D+ V R R MVQT +QY+F +Q ++D
Sbjct: 251 TGTFIAIDRLIYQI--ENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLD 302
>pdb|3B7O|A Chain A, Crystal Structure Of The Human Tyrosine Phosphatase Shp2
(Ptpn11) With An Accessible Active Site
Length = 316
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 138/259 (53%), Gaps = 19/259 (7%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLI------STSSSEKVSQFIATQ 139
N +KNRY +ILPFD RVVL P + YINA++I ++S+ +IATQ
Sbjct: 60 NKNKNRYKNILPFDHTRVVLHDGDPNEPVS-DYINANIIMPEFETKCNNSKPKKSYIATQ 118
Query: 140 GPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWI 199
G L +T DFW MV Q + VIVM T+ V+ K KC Y+ E +E+G V +
Sbjct: 119 GCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKS-KCVKYWPDEYALKEYG----VMRVR 173
Query: 200 KTTETA---LVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP 256
E+A LR L+++ +V + WPDHGVP D V + L+ +++
Sbjct: 174 NVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQ 233
Query: 257 PNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSA-LDLANTVKVFRSQRIGMVQ 312
+ GP+VVHCSAGIGRTG + I + I + +D+ T+++ RSQR GMVQ
Sbjct: 234 ESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQ 293
Query: 313 TMEQYIFCHQAIVDELEDL 331
T QY F + A+ +E L
Sbjct: 294 TEAQYRFIYMAVQHYIETL 312
>pdb|3O5X|A Chain A, Crystal Structure Of The Oncogenic Tyrosine Phosphatase
Shp2 Complexed With A Salicylic Acid-Based Small
Molecule Inhibitor
pdb|3MOW|A Chain A, Crystal Structure Of Shp2 In Complex With A Tautomycetin
Analog Ttn D- 1
Length = 276
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 137/256 (53%), Gaps = 13/256 (5%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLI------STSSSEKVSQFIATQ 139
N +KNRY +ILPFD RVVL P + YINA++I ++S+ +IATQ
Sbjct: 13 NKNKNRYKNILPFDHTRVVLHDGDPNEPVS-DYINANIIMPEFETKCNNSKPKKSYIATQ 71
Query: 140 GPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWI 199
G L +T DFW MV Q + VIVM T+ V+ K KC Y+ E +E+G + V
Sbjct: 72 GCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKS-KCVKYWPDEYALKEYG-VMRVRNVK 129
Query: 200 KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNF 259
++ LR L+++ +V + WPDHGVP D V + L+ +++ +
Sbjct: 130 ESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESI 189
Query: 260 ---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSA-LDLANTVKVFRSQRIGMVQTME 315
GP+VVHCSAGIGRTG + I + I + +D+ T+++ RSQR GMVQT
Sbjct: 190 MDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEA 249
Query: 316 QYIFCHQAIVDELEDL 331
QY F + A+ +E L
Sbjct: 250 QYRFIYMAVQHYIETL 265
>pdb|2PA5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|2PA5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|4GE2|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE2|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE6|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
pdb|4GE6|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
Length = 314
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 143/273 (52%), Gaps = 40/273 (14%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
NL KNRY D+ D+ RV L + + YINAS + ++ + +I TQGPL +T
Sbjct: 52 NLEKNRYGDVPCLDQTRVKLTKRSGH--TQTDYINASFMD--GYKQKNAYIGTQGPLENT 107
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPR-EFG-----NIGI--VTK 197
Y DFW MV + VIVM TR + + KCG Y+ E R FG N+G+ +
Sbjct: 108 YRDFWLMVWEQKVLVIVMTTRFEEGGRR-KCGQYWPLEKDSRIRFGFLTVTNLGVENMNH 166
Query: 198 WIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP- 256
+ KTT LE++ E E V H Q+ WPD+GVP ++ + L+ + N
Sbjct: 167 YKKTT--------LEIHNTE-ERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQS 217
Query: 257 ---PNFG----------PIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVF 303
N G PIVVHCSAGIGRTG +C++ + ++ ++ L++ TV
Sbjct: 218 LAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQL--EELGTLNVFQTVSRM 275
Query: 304 RSQRIGMVQTMEQYIFCHQAIVD--ELEDLISG 334
R+QR +QT EQY FC++AI++ E E ++S
Sbjct: 276 RTQRAFSIQTPEQYYFCYKAILEFAEKEGMVSA 308
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 133/250 (53%), Gaps = 20/250 (8%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTS--SSEKVSQFIATQGPLP 143
NL KNRY D+LP+D RV+L+ +DY INAS ++ ++ V+++IATQGPLP
Sbjct: 44 NLDKNRYKDVLPYDTTRVLLQGNEDY-------INASYVNMEIPAANLVNKYIATQGPLP 96
Query: 144 HTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTE 203
HT FW++V +IVMLT L + + KC Y+ G I + T
Sbjct: 97 HTCAQFWQVVWDQKLSLIVMLTTLTERGR-TKCHQYWPDPPDVMNHGGFHIQCQSEDCTI 155
Query: 204 TALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPIV 263
+ L N + EE +V H+QY WPDHGVP D+ E + + +L + P++
Sbjct: 156 AYVSREMLVTNTQTGEE--HTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVL 213
Query: 264 VHCSAGIGRTGAYCTIHNTV---QRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFC 320
VHCSAGIGRTG T+ + +R L + LD+ V+ R QR MVQT QY F
Sbjct: 214 VHCSAGIGRTGVLVTMETAMCLTERNL--PIYPLDI---VRKMRDQRAMMVQTSSQYKFV 268
Query: 321 HQAIVDELED 330
+AI+ E+
Sbjct: 269 CEAILRVYEE 278
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT EQ F + A+++
Sbjct: 261 IQTAEQLRFSYLAVIE 276
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT EQ F + A+++
Sbjct: 261 IQTAEQLRFSYLAVIE 276
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + +T +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKTYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 144/287 (50%), Gaps = 24/287 (8%)
Query: 57 ISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVL--KQCKDYRPA 114
+ +EF +L RI M G A N+ K R I+P+D NRV+L K+ ++Y
Sbjct: 321 LEEEFRKLTNVRIMKENMRTGNLPA----NMKKARVIQIIPYDFNRVILSMKRGQEYT-- 374
Query: 115 ARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMV 174
YINAS I + FIATQGPL HT EDFW M+ ++ IVMLT V +
Sbjct: 375 --DYINASFID--GYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTE-VQEREQD 429
Query: 175 KCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESE----EPPMSVLHIQY 230
KC Y+ E G G I I K T A+ +R+ V + + E V +
Sbjct: 430 KCYQYWPTE-GSVTHGEITIEIK-NDTLSEAISIRDFLVTLNQPQARQGEQVRVVRQFHF 487
Query: 231 PEWPDHGVPRDTLAVREILKRIYNLPPNFG--PIVVHCSAGIGRTGAYCTIHNTVQRILV 288
WP+ G+P + + +++ + G PI VHCSAG GRTG + + N ++R+
Sbjct: 488 HGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILERVKA 547
Query: 289 GDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELEDLISGF 335
+ LD+ VK R QR MVQT+EQY FC++ + D + D+ S +
Sbjct: 548 EGL--LDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFI-DIFSDY 591
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 129/243 (53%), Gaps = 10/243 (4%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N KNRY +ILP D +RV+L Q D P + YINAS I + ++FIA QGP T
Sbjct: 54 NREKNRYPNILPNDHSRVILSQL-DGIPCS-DYINASYIDGYKEK--NKFIAAQGPKQET 109
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGI-VTKWIKTTET 204
DFW MV + IVMLT L + K KC Y+ + G +GNI + V + +
Sbjct: 110 VNDFWRMVWEQKSATIVMLTNLKER-KEEKCHQYW-PDQGCWTYGNIRVCVEDCVVLVDY 167
Query: 205 ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPP-NFGPIV 263
+ ++ + + P V + + WPD GVP + + + LK++ L P + GPIV
Sbjct: 168 TIRKFCIQPQLPDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAGPIV 227
Query: 264 VHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQA 323
VHCSAG+GRTG + I + ++ +D+ V R+QR MVQT QY F +QA
Sbjct: 228 VHCSAGVGRTGTFIVIDAMMA--MMHAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQA 285
Query: 324 IVD 326
+++
Sbjct: 286 LLE 288
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + +T +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKTYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 44 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 95
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ VKC Y+ Q E+ F + +
Sbjct: 96 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEK-GSVKCAQYWPQKEEKEMIFEDTNLKL 154
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 155 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 213
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 214 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 272
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 273 IQTADQLRFSYLAVIE 288
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 38 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 89
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 90 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 148
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 149 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 207
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 208 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 266
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 267 IQTADQLRFSYLAVIE 282
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 38 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 89
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 90 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 148
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 149 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 207
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 208 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 266
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 267 IQTADQLRFSYLAVIE 282
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 31 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 82
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 83 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 141
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 142 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 200
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 201 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 259
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 260 IQTADQLRFSYLAVIE 275
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 34 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 85
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 86 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 144
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 145 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 203
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 204 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 262
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 263 IQTADQLRFSYLAVIE 278
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 66 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 117
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 118 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 176
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 177 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 235
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 236 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 294
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 295 IQTADQLRFSYLAVIE 310
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 39 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 90
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 91 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 149
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 150 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 208
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 209 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 267
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 268 IQTADQLRFSYLAVIE 283
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 137/259 (52%), Gaps = 19/259 (7%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLI------STSSSEKVSQFIATQ 139
N +KNRY +ILPFD RVVL P + YINA++I ++S+ +IATQ
Sbjct: 273 NKNKNRYKNILPFDHTRVVLHDGDPNEPVS-DYINANIIMPEFETKCNNSKPKKSYIATQ 331
Query: 140 GPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWI 199
G L +T DFW MV Q + VIVM T+ V+ K KC Y+ E +E+G V +
Sbjct: 332 GCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKS-KCVKYWPDEYALKEYG----VMRVR 386
Query: 200 KTTETA---LVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLP 256
E+A LR L+++ +V + WPDHGVP D V + L+ +++
Sbjct: 387 NVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQ 446
Query: 257 PNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSA-LDLANTVKVFRSQRIGMVQ 312
+ GP+VVHCSAGIGRTG + I + I + +D+ T+++ RSQR GMVQ
Sbjct: 447 ESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQ 506
Query: 313 TMEQYIFCHQAIVDELEDL 331
T QY + A+ +E L
Sbjct: 507 TEAQYRSIYMAVQHYIETL 525
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 36 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 87
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 88 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 146
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 147 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 205
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 206 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 264
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 265 IQTADQLRFSYLAVIE 280
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 44 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 95
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 96 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 154
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 155 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 213
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 214 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 272
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 273 IQTADQLRFSYLAVIE 288
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY ++ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYVNVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + +T +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKTYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 44 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 95
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 96 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 154
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 155 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 213
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 214 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 272
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 273 IQTADQLRFSYLAVIE 288
>pdb|2I1Y|A Chain A, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
pdb|2I1Y|B Chain B, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
Length = 301
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 159/298 (53%), Gaps = 21/298 (7%)
Query: 43 LSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNR 102
L++ ++ L+N+ R +++E+ L A + +P+ C A N+ KNR+ D LP+D R
Sbjct: 18 LAYMEDHLRNRDR-LAKEWQALCAYQAEPNT----CATAQGEGNIKKNRHPDFLPYDHAR 72
Query: 103 VVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIV 162
+ LK + P+ YINAS I ++ +IATQGPL HT DFW+MV + C VIV
Sbjct: 73 IKLK--VESSPSRSDYINASPI-IEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIV 129
Query: 163 MLTRLVDNYKMVKCGDYFQAEDGPREFG--NIGIVTKWIKTTETALVLRNLEVNYKESEE 220
MLT LV++ VK D + ++G + + +V++ I + ++R+ + +++E
Sbjct: 130 MLTPLVED--GVKQCDRYWPDEGASLYHVYEVNLVSEHIWCED--FLVRSFYLKNVQTQE 185
Query: 221 PPMSVLHIQYPEWPDHGVP---RDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYC 277
++ + WP G P R L R + + Y PI+VHCS G GRTG Y
Sbjct: 186 -TRTLTQFHFLSWPAEGTPASTRPLLDFRRKVNKCYR--GRSCPIIVHCSDGAGRTGTYI 242
Query: 278 TIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELEDLISGF 335
I + R+ G + +D+A T++ R QR G+V++ +Q+ F A+ +E+ ++
Sbjct: 243 LIDMVLNRMAKG-VKEIDIAATLEHVRDQRPGLVRSKDQFEFALTAVAEEVNAILKAL 299
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 135/248 (54%), Gaps = 18/248 (7%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N ++NRY D+ PFD +R+ L Q YINASLI +++ +I TQGPLP+T
Sbjct: 40 NKNRNRYCDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYILTQGPLPNT 91
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVTKWI-KTTE 203
FWEMV + +VML R+++ + KC Y+ Q E+ F + + I + +
Sbjct: 92 VGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKLTLISEDIK 150
Query: 204 TALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY---NLPPNFG 260
+ +R LE+ ++E +LH Y WPD GVP + L ++ +L P G
Sbjct: 151 SYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHG 209
Query: 261 PIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGMVQTMEQYI 318
P+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G++QT +Q
Sbjct: 210 PVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLR 268
Query: 319 FCHQAIVD 326
F + A+++
Sbjct: 269 FSYLAVIE 276
>pdb|2NZ6|A Chain A, Crystal Structure Of The Ptprj Inactivating Mutant C1239s
Length = 316
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 155/290 (53%), Gaps = 27/290 (9%)
Query: 44 SFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRV 103
++FK++ + + ++E+ L+ I + A A N KNRY ++LP+D +RV
Sbjct: 33 AYFKKQQADSNCGFAEEYEDLKLVGISQPKYA-----AELAENRGKNRYNNVLPYDISRV 87
Query: 104 VLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVM 163
L + YINA+ + S+K FIATQGPLP+T +DFW MV + + I+M
Sbjct: 88 KLSVQTH---STDDYINANYMPGYHSKK--DFIATQGPLPNTLKDFWRMVWEKNVYAIIM 142
Query: 164 LTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETAL---VLRNLEV-NYKESE 219
LT+ V+ + KC +Y+ ++ +++G+I + T+E L +R+ V N + SE
Sbjct: 143 LTKCVEQGR-TKCEEYWPSKQA-QDYGDITVAM----TSEIVLPEWTIRDFTVKNIQTSE 196
Query: 220 EPPMSVLHIQYPEWPDHGVPRDT---LAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAY 276
P+ H + WPDHGVP T + R +++ P PI+VH SAG+GRTG +
Sbjct: 197 SHPLRQFH--FTSWPDHGVPDTTDLLINFRYLVRDYMKQSPPESPILVHSSAGVGRTGTF 254
Query: 277 CTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
I + +I + + +D+ V R R MVQT +QY+F +Q ++D
Sbjct: 255 IAIDRLIYQI--ENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLD 302
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 139/277 (50%), Gaps = 34/277 (12%)
Query: 58 SQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARG 117
S+E LQ +KP + C + N KNRY +ILP+D RV L G
Sbjct: 52 SKELENLQ--ELKPLDQ---CLIGQTKENRRKNRYKNILPYDATRVPLGD-------EGG 99
Query: 118 YINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCG 177
YINAS I ++ +IA QGPLP T DFW+M+ + VI M+T+ V+ K +KC
Sbjct: 100 YINASFIKIPVGKEEFVYIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEK-IKCQ 158
Query: 178 DYFQAEDGPREFGNIGIVTKWIKTTET------ALVLRNLEVNYKESEEPPMSVLHIQYP 231
Y+ P G +V+ ++ V+R + + ++ E + H+ +
Sbjct: 159 RYW-----PNILGKTTMVSNRLRLALVRMQQLKGFVVRAMTLEDIQTRE-VRHISHLNFT 212
Query: 232 EWPDHGVPR---DTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILV 288
WPDH P D L ++ I+ GPI+ HCSAGIGR+G I + V ++
Sbjct: 213 AWPDHDTPSQPDDLLTFISYMRHIH----RSGPIITHCSAGIGRSGTLICI-DVVLGLIS 267
Query: 289 GDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
D+ D+++ V+ R QR GMVQT +QYIFC+Q I+
Sbjct: 268 QDLD-FDISDLVRCMRLQRHGMVQTEDQYIFCYQVIL 303
>pdb|1PTU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Hexa-Peptide
(Dadepyl-Nh2)
pdb|1PTT|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Tetra-Peptide
(Ac-Depyl-Nh2)
Length = 321
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + +T +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKTYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHSSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|2OOQ|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptprt
pdb|2OOQ|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptprt
Length = 286
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 135/244 (55%), Gaps = 16/244 (6%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N +KNRY +I+ +D +RV L D P + YINA+ I + +IATQGP+ T
Sbjct: 47 NRNKNRYGNIISYDHSRVRL-LVLDGDPHS-DYINANYID--GYHRPRHYIATQGPMQET 102
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETA 205
+DFW M+ Q + IVM+T LV+ + VKC Y+ D +G+I + I+T A
Sbjct: 103 VKDFWRMIWQENSASIVMVTNLVEVGR-VKCVRYW--PDDTEVYGDIKVTL--IETEPLA 157
Query: 206 -LVLRNLEVNYKESEE-PPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL-PPNFGPI 262
V+R V K E + + H + WPDHGVP + ++++ L PP GPI
Sbjct: 158 EYVIRTFTVQKKGYHEIRELRLFH--FTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPI 215
Query: 263 VVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQ 322
VVHCSAG GRTG + I + + + +D+ N V+ R+QR+ +VQT EQY+F H
Sbjct: 216 VVHCSAGAGRTGCFIAIDTMLD--MAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHD 273
Query: 323 AIVD 326
AI++
Sbjct: 274 AILE 277
>pdb|1PTV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine
Length = 321
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + +T +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKTYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHSSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|1G1F|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Tri-Phosphorylated Peptide (Rdi(Ptr)
Etd(Ptr)(Ptr)rk) From The Insulin Receptor Kinase
pdb|1G1G|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Mono-Phosphorylated Peptide (Etdy(Ptr)
Rkggkgll) From The Insulin Receptor Kinase
pdb|1G1H|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Bis-Phosphorylated Peptide
(Etd(Ptr)(Ptr) Rkggkgll) From The Insulin Receptor
Kinase
pdb|2B4S|A Chain A, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|C Chain C, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
Length = 298
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHASAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|1EEN|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-D-A-D-Bpa-Ptyr-L-I-P-Q-Q-G
pdb|1EEO|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-E-L-E-F-Ptyr-M-D-Y-E-Nh2
pdb|1PTY|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Phosphotyrosine Molecules
Length = 321
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHSSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|1AAX|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Bis(Para-Phosphophenyl)methane (Bppm)
Molecules
Length = 321
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHSSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|1L8K|A Chain A, T Cell Protein-Tyrosine Phosphatase Structure
Length = 314
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 130/248 (52%), Gaps = 22/248 (8%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N ++NRY D+ P+D +RV L+ A YINASL+ +++ +I TQGPLP+T
Sbjct: 42 NRNRNRYRDVSPYDHSRVKLQN------AENDYINASLVDIEEAQR--SYILTQGPLPNT 93
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKW----IKT 201
FW MV Q +VML R+V+ + VKC Y+ +D F G K +K+
Sbjct: 94 CCHFWLMVWQQKTKAVVMLNRIVEK-ESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKS 152
Query: 202 TETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY---NLPPN 258
T +L+ +N E+ ++ H Y WPD GVP + L ++ +L P+
Sbjct: 153 YYTVHLLQLENINSGETR----TISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPD 208
Query: 259 FGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYI 318
GP V+HCSAGIGR+G + + + + GD +++ + R R+G++QT +Q
Sbjct: 209 HGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGD--DINIKQVLLNMRKYRMGLIQTPDQLR 266
Query: 319 FCHQAIVD 326
F + AI++
Sbjct: 267 FSYMAIIE 274
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 135/255 (52%), Gaps = 16/255 (6%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 38 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 89
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTK 197
TQGPLP+T FWEMV + +VML R+++ + + Q E+ F + +
Sbjct: 90 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKWAQYWPQKEEKEMIFEDTNLKLT 149
Query: 198 WI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY--- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 150 LISEDIKSYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRESG 208
Query: 254 NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGMV 311
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G++
Sbjct: 209 SLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLI 267
Query: 312 QTMEQYIFCHQAIVD 326
QT +Q F + A+++
Sbjct: 268 QTADQLRFSYLAVIE 282
>pdb|1OEO|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To Sulfonic
Acid
pdb|1OET|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEU|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEV|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
Length = 321
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHXSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|3EU0|A Chain A, Crystal Structure Of The S-Nitrosylated Cys215 Of Ptp1b
Length = 327
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 38 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 89
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 90 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 148
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 149 TLISEDIKSYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 207
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 208 GSLSPEHGPVVVHXSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 266
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 267 IQTADQLRFSYLAVIE 282
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 155/290 (53%), Gaps = 27/290 (9%)
Query: 44 SFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRV 103
++FK++ + + ++E+ L+ I + A A N KNRY ++LP+D +RV
Sbjct: 33 AYFKKQQADSNCGFAEEYEDLKLVGISQPKYA-----AELAENRGKNRYNNVLPYDISRV 87
Query: 104 VLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVM 163
L + YINA+ + S+K FIATQGPLP+T +DFW MV + + I+M
Sbjct: 88 KLSVQTH---STDDYINANYMPGYHSKK--DFIATQGPLPNTLKDFWRMVWEKNVYAIIM 142
Query: 164 LTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETAL---VLRNLEV-NYKESE 219
LT+ V+ + KC +Y+ ++ +++G+I + T+E L +R+ V N + SE
Sbjct: 143 LTKCVEQGR-TKCEEYWPSKQA-QDYGDITVAM----TSEIVLPEWTIRDFTVKNIQTSE 196
Query: 220 EPPMSVLHIQYPEWPDHGVPRDT---LAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAY 276
P+ H + PDHGVP T + R +++ P PI+VHCSAG+GRTG +
Sbjct: 197 SHPLRQFH--FTSAPDHGVPDTTDLLINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTF 254
Query: 277 CTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
I + +I + + +D+ V R R MVQT +QY+F +Q ++D
Sbjct: 255 IAIDRLIYQI--ENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLD 302
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 138/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y +PD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQET-REILHFHYTTFPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|1I57|A Chain A, Crystal Structure Of Apo Human Ptp1b (C215s) Mutant
Length = 310
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 44 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 95
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 96 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 154
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 155 TLISEDIKSYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 213
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 214 GSLSPEHGPVVVHSSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 272
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 273 IQTADQLRFSYLAVIE 288
>pdb|3ZV2|A Chain A, Human Protein-Tyrosine Phosphatase 1b C215a, S216a Mutant
Length = 320
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH +AGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHAAAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY ++ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYVNVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + +T +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKTYYTVRQLELENLTTQET-REILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVHCSAGIGR+G +C + +T ++ D S++D+ + R R +
Sbjct: 202 GSLSPEHGPVVVHCSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRCQL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 261 IQTADQLRFSYLAVIE 276
>pdb|1PA1|A Chain A, Crystal Structure Of The C215d Mutant Of Protein Tyrosine
Phosphatase 1b
Length = 310
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 44 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 95
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 96 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 154
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 155 TLISEDIKSYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 213
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 214 GSLSPEHGPVVVHDSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 272
Query: 311 VQTMEQYIFCHQAIVD 326
+QT +Q F + A+++
Sbjct: 273 IQTADQLRFSYLAVIE 288
>pdb|1A5Y|A Chain A, Protein Tyrosine Phosphatase 1b Cysteinyl-Phosphate
Intermediate
Length = 330
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 18/256 (7%)
Query: 78 CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIA 137
C VA N ++NRY D+ PFD +R+ L Q YINASLI +++ +I
Sbjct: 32 CRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ------EDNDYINASLIKMEEAQR--SYIL 83
Query: 138 TQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF-QAEDGPREFGNIGIVT 196
TQGPLP+T FWEMV + +VML R+++ + KC Y+ Q E+ F + +
Sbjct: 84 TQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSL-KCAQYWPQKEEKEMIFEDTNLKL 142
Query: 197 KWI-KTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIY-- 253
I + ++ +R LE+ ++E +LH Y WPD GVP + L ++
Sbjct: 143 TLISEDIKSYYTVRQLELENLTTQE-TREILHFHYTTWPDFGVPESPASFLNFLFKVRES 201
Query: 254 -NLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRIL--VGDMSALDLANTVKVFRSQRIGM 310
+L P GP+VVH SAGIGR+G +C + +T ++ D S++D+ + R R+G+
Sbjct: 202 GSLSPEHGPVVVHXSAGIGRSGTFC-LADTCLLLMDKRKDPSSVDIKKVLLDMRKFRMGL 260
Query: 311 VQTMEQYIFCHQAIVD 326
+ T EQ F + A+++
Sbjct: 261 IATAEQLRFSYLAVIE 276
>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
Tyrosine Phosphatase)
Length = 296
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 139/275 (50%), Gaps = 25/275 (9%)
Query: 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPA 114
+++ +EF ++ ++ + P ++ + G + SK+RY ILP ++RV L + +
Sbjct: 33 KQLEEEFLKIPSNFVSPEDLD------IPG-HASKDRYKTILPNPQSRVCLGRAQSQEDG 85
Query: 115 ARGYINASLI-STSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKM 173
YINA+ I EKV +IATQGP+P+T DFWEMV Q +IVMLT+L + +
Sbjct: 86 --DYINANYIRGYDGKEKV--YIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLREGKE- 140
Query: 174 VKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEW 233
KC Y+ E+ +G I + +K V R L + Y+E SV HI + W
Sbjct: 141 -KCVHYWPTEE--ETYGPFQIRIQDMKECPEYTV-RQLTIQYQEERR---SVKHILFSAW 193
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGD 290
PDH P + ++ + P GPIVVHCSAGIGRTG + Q++
Sbjct: 194 PDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKA-- 251
Query: 291 MSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
+D+ V R R GM+QT EQY F H +
Sbjct: 252 RGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLA 286
>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
Ordered E- Loop
pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
Partially Depleted Active Site
pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
Loop
Length = 308
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 139/275 (50%), Gaps = 25/275 (9%)
Query: 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPA 114
+++ +EF ++ ++ + P ++ + G + SK+RY ILP ++RV L + +
Sbjct: 43 KQLEEEFLKIPSNFVSPEDLD------IPG-HASKDRYKTILPNPQSRVCLGRAQSQEDG 95
Query: 115 ARGYINASLI-STSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKM 173
YINA+ I EKV +IATQGP+P+T DFWEMV Q +IVMLT+L + +
Sbjct: 96 --DYINANYIRGYDGKEKV--YIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLREGKE- 150
Query: 174 VKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEW 233
KC Y+ E+ +G I + +K V R L + Y+E SV HI + W
Sbjct: 151 -KCVHYWPTEE--ETYGPFQIRIQDMKECPEYTV-RQLTIQYQEERR---SVKHILFSAW 203
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGD 290
PDH P + ++ + P GPIVVHCSAGIGRTG + Q++
Sbjct: 204 PDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKA-- 261
Query: 291 MSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
+D+ V R R GM+QT EQY F H +
Sbjct: 262 RGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLA 296
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 145/283 (51%), Gaps = 20/283 (7%)
Query: 49 KLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQC 108
++ + ++ +EF L A I+ + C A N KNRY +ILP+D +RV L
Sbjct: 23 RMADDNKLFREEFNALPACPIQAT-----CEAASKEENKEKNRYVNILPYDHSRVHLTPV 77
Query: 109 KDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLV 168
+ + YINAS I+ ++ ++FIA QGP T DFW M+ + + IVM+T L
Sbjct: 78 EGVPDS--DYINASFIN--GYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLK 133
Query: 169 DNYKMVKCGDYFQAEDGPREFGNIGI----VTKWIKTTETALVLRNLEVNYKESEEPPMS 224
+ K KC Y+ + G +GN+ + VT + T ++ +V + +P
Sbjct: 134 ER-KECKCAQYW-PDQGCWTYGNVRVSVEDVTVLVDYTVRKFCIQ--QVGDVTNRKPQRL 189
Query: 225 VLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNF-GPIVVHCSAGIGRTGAYCTIHNTV 283
+ + WPD GVP + + + LK++ P + G IVVHCSAG+GRTG + I +
Sbjct: 190 ITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAML 249
Query: 284 QRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
++ +D+ V R+QR MVQT QY+F +QA+++
Sbjct: 250 D--MMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLE 290
>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
Phosphatase (heptp) Catalytic Domain
Length = 309
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 139/275 (50%), Gaps = 25/275 (9%)
Query: 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPA 114
+++ +EF ++ ++ + P ++ + G + SK+RY ILP ++RV L + +
Sbjct: 44 KQLEEEFLKIPSNFVSPEDLD------IPG-HASKDRYKTILPNPQSRVCLGRAQSQEDG 96
Query: 115 ARGYINASLI-STSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKM 173
YINA+ I EKV +IATQGP+P+T DFWEMV Q +IVMLT+L + +
Sbjct: 97 --DYINANYIRGYDGKEKV--YIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLREGKE- 151
Query: 174 VKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEW 233
KC Y+ E+ +G I + +K V R L + Y+E SV HI + W
Sbjct: 152 -KCVHYWPTEE--ETYGPFQIRIQDMKECPEYTV-RQLTIQYQEERR---SVKHILFSAW 204
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGD 290
PDH P + ++ + P GPIVVHCSAGIGRTG + Q++
Sbjct: 205 PDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKA-- 262
Query: 291 MSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
+D+ V R R GM+QT EQY F H +
Sbjct: 263 RGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLA 297
>pdb|2QEP|A Chain A, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
pdb|2QEP|B Chain B, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
Length = 304
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 153/298 (51%), Gaps = 25/298 (8%)
Query: 43 LSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNR 102
LS+ ++ L+NK+R + +E+ L A + +P+ VA N+ KNR +L +D +R
Sbjct: 19 LSYMEDHLKNKNR-LEKEWEALCAYQAEPN----SSFVAQREENVPKNRSLAVLTYDHSR 73
Query: 103 VVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIV 162
V+LK + + YINAS I + +IATQGPLP T DFW+MV + C VIV
Sbjct: 74 VLLKAENSH--SHSDYINASPI-MDHDPRNPAYIATQGPLPATVADFWQMVWESGCVVIV 130
Query: 163 MLTRLVDNYKMVKCGDYFQAE-DGPREFGNIGIVTKWIKTTE---TALVLRNLEVNYKES 218
MLT L +N + +C Y+ E + +V++ I + + L+NL+ N
Sbjct: 131 MLTPLAEN-GVRQCYHYWPDEGSNLYHIYEVNLVSEHIWCEDFLVRSFYLKNLQTNETR- 188
Query: 219 EEPPMSVLHIQYPEWPDHGVP---RDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGA 275
+V + W D GVP R L R + + Y PI+VHCS G GR+G
Sbjct: 189 -----TVTQFHFLSWYDRGVPSSSRSLLDFRRKVNKCYR--GRSCPIIVHCSDGAGRSGT 241
Query: 276 YCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELEDLIS 333
Y I + ++ G +D+A T++ R QR GMVQT EQ+ F A+ +E+ +++
Sbjct: 242 YVLIDMVLNKMAKG-AKEIDIAATLEHLRDQRPGMVQTKEQFEFALTAVAEEVNAILA 298
>pdb|3D42|A Chain A, Crystal Structure Of Heptp In Complex With A
Monophosphorylated Erk2 Peptide
pdb|3D44|A Chain A, Crystal Structure Of Heptp In Complex With A Dually
Phosphorylated Erk2 Peptide Mimetic
Length = 308
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 139/275 (50%), Gaps = 25/275 (9%)
Query: 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPA 114
+++ +EF ++ ++ + P ++ + G + SK+RY DILP ++RV L + +
Sbjct: 43 KQLEEEFLKIPSNFVSPEDLD------IPG-HASKDRYKDILPNPQSRVCLGRAQSQEDG 95
Query: 115 ARGYINASLI-STSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKM 173
YINA+ I EKV +IATQGP+P+T DFWEMV Q +IVMLT+L + +
Sbjct: 96 --DYINANYIRGYDGKEKV--YIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLREGKE- 150
Query: 174 VKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEW 233
KC Y+ E+ +G I + +K V R L + Y+E SV HI + W
Sbjct: 151 -KCVHYWPTEE--ETYGPFQIRIQDMKECPEYTV-RQLTIQYQEERR---SVKHILFSAW 203
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGD 290
PDH P + ++ + P GPIVVH SAGIGRTG + Q++
Sbjct: 204 PDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHSSAGIGRTGCFIATRIGCQQLKA-- 261
Query: 291 MSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
+D+ V R R GM+QT EQY F H +
Sbjct: 262 RGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLA 296
>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
Length = 309
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 138/275 (50%), Gaps = 25/275 (9%)
Query: 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPA 114
+++ +EF ++ ++ + P ++ + G + SK+RY ILP ++RV L + +
Sbjct: 44 KQLEEEFLKIPSNFVSPEDLD------IPG-HASKDRYKTILPNPQSRVCLGRAQSQEDG 96
Query: 115 ARGYINASLI-STSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKM 173
YINA+ I EKV +IATQGP+P+T DFWEMV Q +IVMLT+L + +
Sbjct: 97 --DYINANYIRGYDGKEKV--YIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLREGKE- 151
Query: 174 VKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEW 233
KC Y+ E+ +G I + +K V R L + Y+E V HI + W
Sbjct: 152 -KCVHYWPTEE--ETYGPFQIRIQDMKECPEYTV-RQLTIQYQEERR---DVKHILFSAW 204
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGD 290
PDH P + ++ + P GPIVVHCSAGIGRTG + Q++
Sbjct: 205 PDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKA-- 262
Query: 291 MSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
+D+ V R R GM+QT EQY F H +
Sbjct: 263 RGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLA 297
>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
Mutant
Length = 309
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 138/275 (50%), Gaps = 25/275 (9%)
Query: 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPA 114
+++ +EF ++ ++ + P ++ + G + SK+RY ILP ++RV L + +
Sbjct: 44 KQLEEEFLKIPSNFVSPEDLD------IPG-HASKDRYKTILPNPQSRVCLGRAQSQEDG 96
Query: 115 ARGYINASLI-STSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKM 173
YINA+ I EKV +IATQGP+P+T DFWEMV Q +IVMLT+L + +
Sbjct: 97 --DYINANYIRGYDGKEKV--YIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLREGKE- 151
Query: 174 VKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEW 233
KC Y+ E+ +G I + +K V R L + Y+E SV HI + W
Sbjct: 152 -KCVHYWPTEE--ETYGPFQIRIQDMKECPEYTV-RQLTIQYQEERR---SVKHILFSAW 204
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGD 290
P H P + ++ + P GPIVVHCSAGIGRTG + Q++
Sbjct: 205 PAHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKA-- 262
Query: 291 MSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
+D+ V R R GM+QT EQY F H +
Sbjct: 263 RGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLA 297
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 141/285 (49%), Gaps = 39/285 (13%)
Query: 57 ISQEFARLQ-ASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAA 115
S+EF L+ R +P CT A N KNR+T+ILP+D +R L+ D
Sbjct: 46 FSEEFEELKHVGRDQP------CTFADLPCNRPKNRFTNILPYDHSRFKLQPVDD--DEG 97
Query: 116 RGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVK 175
YINA+ + +S + +FI TQGPL T +DFW M + + IVMLTR + + K
Sbjct: 98 SDYINANYVPGHNSPR--EFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGRE-K 154
Query: 176 CGDYFQAEDGPREFGNIGI-------VTKWIKTTETALVLRNLEVNYKESEEPPMSVLHI 228
C Y+ + P +G+I + W+ TE L + SE+ + H
Sbjct: 155 CDQYWPNDTVPVFYGDIKVQILNDSHYADWV-MTEFMLC--------RGSEQRILR--HF 203
Query: 229 QYPEWPDHGVPR--DTLA--VREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQ 284
+ WPD GVP TL VR RI PIVVHCSAG+GR+G + T+ +Q
Sbjct: 204 HFTTWPDFGVPNPPQTLVRFVRAFRDRI---GAEQRPIVVHCSAGVGRSGTFITLDRILQ 260
Query: 285 RILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELE 329
+I D +D+ V R +R+ MVQT +QYI HQ ++ LE
Sbjct: 261 QINTSDY--VDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLE 303
>pdb|2HVL|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant
pdb|2QDP|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant Crystallized In Ammonium Acetate
Length = 309
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 138/275 (50%), Gaps = 25/275 (9%)
Query: 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPA 114
+++ +EF ++ ++ + P ++ + G + SK+RY ILP ++RV L + +
Sbjct: 44 KQLEEEFLKIPSNFVSPEDLD------IPG-HASKDRYKTILPNPQSRVCLGRAQSQEDG 96
Query: 115 ARGYINASLI-STSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKM 173
YINA+ I EKV +IATQGP+P+T DFWEMV Q +IVMLT+L + +
Sbjct: 97 --DYINANYIRGYDGKEKV--YIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLREGKE- 151
Query: 174 VKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEW 233
KC Y+ E+ +G I + +K V R L + Y+E SV HI + W
Sbjct: 152 -KCVHYWPTEE--ETYGPFQIRIQDMKECPEYTV-RQLTIQYQEERR---SVKHILFSAW 204
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGD 290
PDH P + ++ + P GPIVVH SAGIGRTG + Q++
Sbjct: 205 PDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHSSAGIGRTGCFIATRIGCQQLKA-- 262
Query: 291 MSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
+D+ V R R GM+QT EQY F H +
Sbjct: 263 RGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLA 297
>pdb|1RPM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
pdb|1RPM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
Length = 278
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 127/243 (52%), Gaps = 14/243 (5%)
Query: 86 NLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHT 145
N KNRY +I+ +D +RV L+ + YIN + I + + +IATQGP+ T
Sbjct: 45 NRMKNRYGNIIAYDHSRVRLQTIEG--DTNSDYINGNYID--GYHRPNHYIATQGPMQET 100
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETA 205
DFW MV + I+M+T LV+ + VKC Y+ D + +I + I+T A
Sbjct: 101 IYDFWRMVWHENTASIIMVTNLVEVGR-VKCCKYWP--DDTEIYKDIKVTL--IETELLA 155
Query: 206 -LVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL-PPNFGPIV 263
V+R V K + + WPDHGVP + ++++ + PP+ GP+V
Sbjct: 156 EYVIRTFAVE-KRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPSAGPLV 214
Query: 264 VHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQA 323
VHCSAG GRTG + I + + +D+ N V+ RS+R+ MVQT EQY+F H A
Sbjct: 215 VHCSAGAGRTGCFIVI--DIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDA 272
Query: 324 IVD 326
I++
Sbjct: 273 ILE 275
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 41/284 (14%)
Query: 71 PSEMARG--CTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSS 128
P + A G T AL N ++R +++P+++NRV L K+ GYINAS I
Sbjct: 55 PKKKANGIFSTAALPE-NAERSRIREVVPYEENRVELIPTKENNT---GYINASHIKVVV 110
Query: 129 SEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYF---QAEDG 185
+IATQGPLPHT DFW+MV + VI M+T + + K Y+ ++
Sbjct: 111 GGAEWHYIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEEEGGR-TKSHRYWPKLGSKHS 169
Query: 186 PREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAV 245
+G + TK +T L+V + S + +V H+QY +WPDHG P D
Sbjct: 170 SATYGKFKVTTK-FRTDSVCYATTGLKVKHLLSGQ-ERTVWHLQYTDWPDHGCPEDVQGF 227
Query: 246 REILKRIYNLPPNFG-----------PIVVHCSAGIGRTGA--------YCTIHNTVQRI 286
L+ I ++ + PIVVHCSAG+GRTG YC HN
Sbjct: 228 LSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELMIYCLEHN----- 282
Query: 287 LVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELED 330
+++ +++ R QR+ M+QT+ QY F +Q ++ L++
Sbjct: 283 -----EKVEVPMMLRLLREQRMFMIQTIAQYKFVYQVLIQFLQN 321
>pdb|2P6X|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
pdb|2P6X|B Chain B, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
Length = 309
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 41 EALSFFKEKLQNKS---REISQEFARLQASRIK-PSEMARGCTVALDGVNLSKNRYTDIL 96
E L F ++ Q+K E + EF +L+ K ++ TVA N+ KNRY DIL
Sbjct: 5 EILQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDIL 64
Query: 97 PFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQY 156
P+D +RV L ++ YINA+ I K +IATQGPL T DFW M+ +Y
Sbjct: 65 PYDYSRVELSLITSDEDSS--YINANFIKGVYGPKA--YIATQGPLSTTLLDFWRMIWEY 120
Query: 157 HCPVIVMLTRLVDNYKM--VKCGDYFQAEDGPR--EFGNIGIVTKWIKTTETALVLRNLE 212
+IVM Y+M KC Y+ AE G EFG + + + ++ ++R L+
Sbjct: 121 SVLIIVMACM---EYEMGKKKCERYW-AEPGEMQLEFGPFSVSCE-AEKRKSDYIIRTLK 175
Query: 213 VNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL----PPNFGPIVVHCSA 268
V + ++ Y WPDH VP ++ IL+ I+++ + PI +HCSA
Sbjct: 176 VKFNSETR---TIYQFHYKNWPDHDVPS---SIDPILELIWDVRCYQEDDSVPICIHCSA 229
Query: 269 GIGRTGAYCTIHNTVQRILVGDM-SALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
G GRTG C I T + G + + + ++ R+QR +VQT EQY + A+++
Sbjct: 230 GCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLE 288
>pdb|3H2X|A Chain A, Crystal Structure Of The Human Lymphoid Tyrosine
Phosphatase Catalytic Domain
Length = 302
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 41 EALSFFKEKLQNKS---REISQEFARLQASRIK-PSEMARGCTVALDGVNLSKNRYTDIL 96
E L F ++ Q+K E + EF +L+ K ++ TVA N+ KNRY DIL
Sbjct: 5 EILQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDIL 64
Query: 97 PFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQY 156
P+D +RV L ++ YINA+ I K +IATQGPL T DFW M+ +Y
Sbjct: 65 PYDYSRVELSLITSDEDSS--YINANFIKGVYGPKA--YIATQGPLSTTLLDFWRMIWEY 120
Query: 157 HCPVIVMLTRLVDNYKM--VKCGDYFQAEDGPR--EFGNIGIVTKWIKTTETALVLRNLE 212
+IVM Y+M KC Y+ AE G EFG + + + ++ ++R L+
Sbjct: 121 SVLIIVMACM---EYEMGKKKCERYW-AEPGEMQLEFGPFSVSCE-AEKRKSDYIIRTLK 175
Query: 213 VNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL----PPNFGPIVVHCSA 268
V + ++ Y WPDH VP ++ IL+ I+++ + PI +HCSA
Sbjct: 176 VKFNSETR---TIYQFHYKNWPDHDVPS---SIDPILELIWDVRCYQEDDSVPICIHCSA 229
Query: 269 GIGRTGAYCTIHNTVQRILVGDM-SALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
G GRTG C I T + G + + + ++ R+QR +VQT EQY + A+++
Sbjct: 230 GCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLE 288
>pdb|2QCJ|A Chain A, Native Structure Of Lyp
pdb|2QCJ|B Chain B, Native Structure Of Lyp
pdb|2QCT|A Chain A, Structure Of Lyp With Inhibitor I-C11
pdb|2QCT|B Chain B, Structure Of Lyp With Inhibitor I-C11
Length = 313
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 41 EALSFFKEKLQNKS---REISQEFARLQASRIK-PSEMARGCTVALDGVNLSKNRYTDIL 96
E L F ++ Q+K E + EF +L+ K ++ TVA N+ KNRY DIL
Sbjct: 24 EILQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDIL 83
Query: 97 PFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQY 156
P+D +RV L ++ YINA+ I K +IATQGPL T DFW M+ +Y
Sbjct: 84 PYDYSRVELSLITSDEDSS--YINANFIKGVYGPKA--YIATQGPLSTTLLDFWRMIWEY 139
Query: 157 HCPVIVMLTRLVDNYKM--VKCGDYFQAEDGPR--EFGNIGIVTKWIKTTETALVLRNLE 212
+IVM Y+M KC Y+ AE G EFG + + + ++ ++R L+
Sbjct: 140 SVLIIVMACM---EYEMGKKKCERYW-AEPGEMQLEFGPFSVSCE-AEKRKSDYIIRTLK 194
Query: 213 VNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL----PPNFGPIVVHCSA 268
V + ++ Y WPDH VP ++ IL+ I+++ + PI +HCSA
Sbjct: 195 VKFNSETR---TIYQFHYKNWPDHDVPS---SIDPILELIWDVRCYQEDDSVPICIHCSA 248
Query: 269 GIGRTGAYCTIHNTVQRILVGDM-SALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
G GRTG C I T + G + + + ++ R+QR +VQT EQY + A+++
Sbjct: 249 GCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLE 307
>pdb|2QDM|A Chain A, Crystal Structure Of The Heptp Catalytic Domain
C270sD236AQ314A Mutant
Length = 309
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 136/275 (49%), Gaps = 25/275 (9%)
Query: 55 REISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKDYRPA 114
+++ +EF ++ ++ + P ++ + G + SK+RY ILP ++RV L + +
Sbjct: 44 KQLEEEFLKIPSNFVSPEDLD------IPG-HASKDRYKTILPNPQSRVCLGRAQSQEDG 96
Query: 115 ARGYINASLI-STSSSEKVSQFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLVDNYKM 173
YINA+ I EKV +IATQGP+P+T DFWEMV Q +IVMLT+L + +
Sbjct: 97 --DYINANYIRGYDGKEKV--YIATQGPMPNTVSDFWEMVWQEEVSLIVMLTQLREGKE- 151
Query: 174 VKCGDYFQAEDGPREFGNIGIVTKWIKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEW 233
KC Y+ E+ +G I + +K V R L + Y+E SV HI + W
Sbjct: 152 -KCVHYWPTEE--ETYGPFQIRIQDMKECPEYTV-RQLTIQYQEERR---SVKHILFSAW 204
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNF---GPIVVHCSAGIGRTGAYCTIHNTVQRILVGD 290
P H P + ++ + P GPIVVH SAGIGRTG + Q++
Sbjct: 205 PAHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHSSAGIGRTGCFIATRIGCQQLKA-- 262
Query: 291 MSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
+D+ V R R GM+ T EQY F H +
Sbjct: 263 RGEVDILGIVCQLRLDRGGMIATAEQYQFLHHTLA 297
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 123/240 (51%), Gaps = 15/240 (6%)
Query: 88 SKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYE 147
+KNRY ILP +RV L+ K+ + YINA+ I S K FIATQGP+ +T
Sbjct: 58 TKNRYKTILPNPLSRVCLRP-KNITDSLSTYINANYIRGYSG-KEKAFIATQGPMINTVN 115
Query: 148 DFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALV 207
DFW+MV Q PVIVM+T+L + K KC Y+ + G +G + ++ + +
Sbjct: 116 DFWQMVWQEDSPVIVMITKLKE--KNEKCVLYWPEKRGI--YGKVEVLVTGVTECDN-YT 170
Query: 208 LRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYN---LPPNFGPIVV 264
+RNL + + V H Y WPDH P + +++ + GP+VV
Sbjct: 171 IRNLVLKQGSHTQ---HVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVVV 227
Query: 265 HCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAI 324
HCSAGIGRTG C I ++ + + +D + V R R GMVQT EQY F H A+
Sbjct: 228 HCSAGIGRTG--CFIATSIGCQQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHHAL 285
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 124/240 (51%), Gaps = 15/240 (6%)
Query: 88 SKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYE 147
+KNRY ILP +RV L+ K+ + YINA+ I S K FIATQGP+ +T +
Sbjct: 45 TKNRYKTILPNPLSRVCLRP-KNVTDSLSTYINANYIRGYSG-KEKAFIATQGPMINTVD 102
Query: 148 DFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETALV 207
DFW+MV Q PVIVM+T+L + K KC Y+ + G +G + ++ + +
Sbjct: 103 DFWQMVWQEDSPVIVMITKLKE--KNEKCVLYWPEKRGI--YGKVEVLVISVNECDN-YT 157
Query: 208 LRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYN---LPPNFGPIVV 264
+RNL + + V H Y WPDH P + +++ + GP+VV
Sbjct: 158 IRNLVLKQGSHTQ---HVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVV 214
Query: 265 HCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAI 324
HCSAGIGRTG C I ++ + + +D + V R R GMVQT EQY F H A+
Sbjct: 215 HCSAGIGRTG--CFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHAL 272
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 134/305 (43%), Gaps = 36/305 (11%)
Query: 40 SEALSFFKEKLQNKSREISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILPFD 99
S F K +Q + + +EF+ L E R + A N KNRY DIL
Sbjct: 4 SNCFPFTKLSVQAQYERVQREFSLLLRQ-----EDPRSISFATSLKNRHKNRYLDIL--- 55
Query: 100 KNRVVLKQCKDYRPAARG--YINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQYH 157
N L P A YIN +LI K F+A Q P+ DF M+ +
Sbjct: 56 ANEATLYPQVTDAPGASTPYYINGNLIDLDLPHK---FVACQAPVVQGIPDFLAMLYEKK 112
Query: 158 CPVIVMLTRLVDNYKMVKCGDYFQAEDGPREF---GNIGI-----------VTKWIKTTE 203
+++M+T+L + VK Y+ E G GN G+ V +K T
Sbjct: 113 ISLVIMVTKLEEG-GFVKADRYWPEERGSGSIAVSGNCGLTISEDPGKAYEVEDELKITR 171
Query: 204 TALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPIV 263
L+L + ++EPP +QY WPDHG+P+ ++ +L + N P P+V
Sbjct: 172 RYLIL-------QRADEPPHKFTQVQYTGWPDHGIPQSATSLEALLTNVKNSPTTV-PVV 223
Query: 264 VHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQA 323
VHCSAGIGRTG + + + G ++ + + V R QR GMVQ MEQY +
Sbjct: 224 VHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSAMRRQRFGMVQRMEQYFVIYLT 283
Query: 324 IVDEL 328
++ L
Sbjct: 284 LMCRL 288
>pdb|3OLR|A Chain A, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|B Chain B, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|C Chain C, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|D Chain D, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OMH|A Chain A, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|B Chain B, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|C Chain C, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|D Chain D, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
Length = 313
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 147/299 (49%), Gaps = 28/299 (9%)
Query: 41 EALSFFKEKLQNKS---REISQEFARLQASRIK-PSEMARGCTVALDGVNLSKNRYTDIL 96
E L F ++ Q+K E + EF +L+ K ++ TVA N+ KNRY DIL
Sbjct: 24 EILQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDIL 83
Query: 97 PFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQY 156
P+D +RV L ++ YINA+ I K +IATQGPL T DFW M+ +Y
Sbjct: 84 PYDYSRVELSLITSDEDSS--YINANFIKGVYGPKA--YIATQGPLSTTLLDFWRMIWEY 139
Query: 157 HCPVIVMLTRLVDNYKM--VKCGDYFQAEDGPR--EFGNIGIVTKWIKTTETALVLRNLE 212
+IVM Y+M KC Y+ AE G EFG + + + ++ ++R L+
Sbjct: 140 SVLIIVMACM---EYEMGKKKCERYW-AEPGEMQLEFGPFSVSCE-AEKRKSDYIIRTLK 194
Query: 213 VNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL----PPNFGPIVVHCSA 268
V + ++ Y WPDH VP ++ IL+ I+++ + PI +H SA
Sbjct: 195 VKFNSETR---TIYQFHYKNWPDHDVPS---SIDPILELIWDVRCYQEDDSVPICIHSSA 248
Query: 269 GIGRTGAYCTIHNTVQRILVGDM-SALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
G GRTG C I T + G + + + ++ R+QR +VQT EQY + A+++
Sbjct: 249 GCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLE 307
>pdb|3BRH|A Chain A, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
pdb|3BRH|B Chain B, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
Length = 310
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 146/299 (48%), Gaps = 28/299 (9%)
Query: 41 EALSFFKEKLQNKS---REISQEFARLQASRIK-PSEMARGCTVALDGVNLSKNRYTDIL 96
E L F ++ Q+K E + EF +L+ K ++ TVA N+ KNRY DIL
Sbjct: 5 EILQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDIL 64
Query: 97 PFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQY 156
P+D +RV L ++ YINA+ I K +IATQGPL T DFW M+ +Y
Sbjct: 65 PYDYSRVELSLITSDEDSS--YINANFIKGVYGPKA--YIATQGPLSTTLLDFWRMIWEY 120
Query: 157 HCPVIVMLTRLVDNYKM--VKCGDYFQAEDGPR--EFGNIGIVTKWIKTTETALVLRNLE 212
+IVM Y+M KC Y+ AE G EFG + + + ++ ++R L+
Sbjct: 121 SVLIIVMACM---EYEMGKKKCERYW-AEPGEMQLEFGPFSVSCE-AEKRKSDYIIRTLK 175
Query: 213 VNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNL----PPNFGPIVVHCSA 268
V + ++ Y WP H VP ++ IL+ I+++ + PI +H SA
Sbjct: 176 VKFNSETR---TIYQFHYKNWPAHDVPS---SIDPILELIWDVRCYQEDDSVPICIHSSA 229
Query: 269 GIGRTGAYCTIHNTVQRILVGDM-SALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIVD 326
G GRTG C I T + G + + + ++ R+QR +VQT EQY + A+++
Sbjct: 230 GCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNAVLE 288
>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 (step, Striatum Enriched Enriched
Phosphatase)
Length = 305
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 118/243 (48%), Gaps = 18/243 (7%)
Query: 87 LSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLI-STSSSEKVSQFIATQGPLPHT 145
+ KNRY ILP +RV L P + YINA+ I EKV +IATQGP+ T
Sbjct: 65 VRKNRYKTILPNPHSRVCLTSPDPDDPLS-SYINANYIRGYGGEEKV--YIATQGPIVST 121
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETA 205
DFW MV Q H P+IVM+T + + + KC +Y+ E + I V K I T +
Sbjct: 122 VADFWRMVWQEHTPIIVMITNIEEMNE--KCTEYWPEEQVAYDGVEI-TVQKVIHTEDYR 178
Query: 206 LVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDT----LAVREILKRIYNLPPNFGP 261
L L +L+ +E + H + WPD P VRE+ + P+ P
Sbjct: 179 LRLISLKSGTEER-----GLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAP 233
Query: 262 IVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCH 321
I+VHCSAGIGRTG + Q++ +D+ T R R GM+QT EQY F H
Sbjct: 234 IIVHCSAGIGRTGCFIATSICCQQLR--QEGVVDILKTTCQLRQDRGGMIQTCEQYQFVH 291
Query: 322 QAI 324
+
Sbjct: 292 HVM 294
>pdb|2CJZ|A Chain A, Crystal Structure Of The C472s Mutant Of Human Protein
Tyrosine Phosphatase Ptpn5 (Step, Striatum Enriched
Phosphatase) In Complex With Phosphotyrosine
Length = 305
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 87 LSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLI-STSSSEKVSQFIATQGPLPHT 145
+ KNRY ILP +RV L P + YINA+ I EKV +IATQGP+ T
Sbjct: 65 VRKNRYKTILPNPHSRVCLTSPDPDDPLS-SYINANYIRGYGGEEKV--YIATQGPIVST 121
Query: 146 YEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETA 205
DFW MV Q H P+IVM+T + + + KC +Y+ E + I V K I T +
Sbjct: 122 VADFWRMVWQEHTPIIVMITNIEEMNE--KCTEYWPEEQVAYDGVEI-TVQKVIHTEDYR 178
Query: 206 LVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDT----LAVREILKRIYNLPPNFGP 261
L L +L+ +E + H + WPD P VRE+ + P+ P
Sbjct: 179 LRLISLKSGTEER-----GLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAP 233
Query: 262 IVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCH 321
I+VH SAGIGRTG + Q++ +D+ T R R GM+QT EQY F H
Sbjct: 234 IIVHSSAGIGRTGCFIATSICCQQLR--QEGVVDILKTTCQLRQDRGGMIQTCEQYQFVH 291
Query: 322 QAI 324
+
Sbjct: 292 HVM 294
>pdb|2BV5|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 At 1.8a Resolution
Length = 282
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 116/242 (47%), Gaps = 16/242 (6%)
Query: 87 LSKNRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTY 146
+ KNRY ILP +RV L P + YINA+ I E+ +IATQGP+ T
Sbjct: 44 VRKNRYKTILPNPHSRVCLTSPDPDDPLS-SYINANYIRGYGGEE-KVYIATQGPIVSTV 101
Query: 147 EDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTETAL 206
DFW MV Q H P+IVM+T + + + KC +Y+ E + I V K I T + L
Sbjct: 102 ADFWRMVWQEHTPIIVMITNIEEMNE--KCTEYWPEEQVAYDGVEI-TVQKVIHTEDYRL 158
Query: 207 VLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLA----VREILKRIYNLPPNFGPI 262
L +L+ +E + H + WPD P VRE+ + P+ PI
Sbjct: 159 RLISLKSGTEER-----GLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPI 213
Query: 263 VVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQ 322
+VH SAGIGRTG + Q++ +D+ T R R GM+QT EQY F H
Sbjct: 214 IVHXSAGIGRTGCFIATSICCQQL--RQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHH 271
Query: 323 AI 324
+
Sbjct: 272 VM 273
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 145/312 (46%), Gaps = 27/312 (8%)
Query: 40 SEALSFFKEKLQNKSR--EISQEFARLQASRIKPSEMARGCTVALDGVNLSKNRYTDILP 97
S A SF +L +++ + +EF +LQ E R N KNRY DIL
Sbjct: 2 STAKSFPMAQLSTRAQYSRMQREFVQLQRQ-----ENPRNINFTTSLKNRHKNRYLDILA 56
Query: 98 FDKNRV--VLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDFWEMVIQ 155
++ VLK +P YIN +LI F+A Q P+P DF E + +
Sbjct: 57 NEETIYPPVLKAV-GAQPGRYPYINGNLIDLDLPHT---FVACQAPVPQGVPDFLETLSE 112
Query: 156 YHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPR----EFGNIGI-VTKWIKTT-----ETA 205
++VMLT+L + ++K Y+ E+ E G+ I VT+ + + E
Sbjct: 113 KKVDLVVMLTKLREG-GVLKAERYWPEEEEDSLSFPESGHDAIKVTRDAEASYEVDAELD 171
Query: 206 LVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPIVVH 265
+V R L ++ +P VL +QY WPDHGVP + E+L I N PI+VH
Sbjct: 172 IVRRPLVIHV--PGKPMHRVLQVQYVGWPDHGVPESAASFDELLSVIKNCVTT-SPILVH 228
Query: 266 CSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQYIFCHQAIV 325
CSAGIGRTG + + I G ++ + + V + +R GMVQ +EQY + ++
Sbjct: 229 CSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQKRFGMVQRLEQYAVIYMTVL 288
Query: 326 DELEDLISGFNS 337
L ISG S
Sbjct: 289 GRLGVDISGLVS 300
>pdb|1PA9|A Chain A, Yersinia Protein-Tyrosine Phosphatase Complexed With Pncs
(Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic
Domain, Residues 163-468) Mutant With Cys 235 Replaced
By Arg (C235r)
Length = 284
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 100/260 (38%), Gaps = 69/260 (26%)
Query: 90 NRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDF 149
NR+ DI QC+ + A R +NA+ I ++ + IA Q PL E
Sbjct: 43 NRFRDI-----------QCR-RQTAVRADLNANYIQVGNT----RTIACQYPLQSQLESH 86
Query: 150 WEMVIQYHCPVIVML--TRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET--- 204
+ M+ + PV+ +L + + N + DYF R+ G G +T K T+
Sbjct: 87 FRMLAENRTPVLAVLASSSEIANQRF-GMPDYF------RQSGTYGSITVESKMTQQVGL 139
Query: 205 --ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPI 262
++ + +E+ + +SV + WPD T E+ K + +L
Sbjct: 140 GDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQ-----TAVSSEVTKALASLVDQTAET 194
Query: 263 ---------------------VVHCSAGIGRT----GAYCTIHNTVQRILVGDMSALDLA 297
V+HC AG+GRT GA C + ++ V DM
Sbjct: 195 KRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM------ 248
Query: 298 NTVKVFRSQRIG-MVQTMEQ 316
V R QR G MVQ EQ
Sbjct: 249 --VSQMRVQRNGIMVQKDEQ 266
>pdb|1YPT|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|1YPT|B Chain B, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|3BLU|A Chain A, Crystal Structure Yoph Complexed With Inhibitor Pvs
pdb|3BLT|A Chain A, Crystal Structures Of Yoph Complexed With Pvsn And Pvs,
Inhibitors Of Yoph Which Co-Valent Bind To Cys Of Active
Site
Length = 305
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 100/260 (38%), Gaps = 69/260 (26%)
Query: 90 NRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDF 149
NR+ DI QC+ + A R +NA+ I ++ + IA Q PL E
Sbjct: 64 NRFRDI-----------QCR-RQTAVRADLNANYIQVGNT----RTIACQYPLQSQLESH 107
Query: 150 WEMVIQYHCPVIVML--TRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET--- 204
+ M+ + PV+ +L + + N + DYF R+ G G +T K T+
Sbjct: 108 FRMLAENRTPVLAVLASSSEIANQRF-GMPDYF------RQSGTYGSITVESKMTQQVGL 160
Query: 205 --ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPI 262
++ + +E+ + +SV + WPD T E+ K + +L
Sbjct: 161 GDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQ-----TAVSSEVTKALASLVDQTAET 215
Query: 263 ---------------------VVHCSAGIGRT----GAYCTIHNTVQRILVGDMSALDLA 297
V+HC AG+GRT GA C + ++ V DM
Sbjct: 216 KRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM------ 269
Query: 298 NTVKVFRSQRIG-MVQTMEQ 316
V R QR G MVQ EQ
Sbjct: 270 --VSQMRVQRNGIMVQKDEQ 287
>pdb|1QZ0|A Chain A, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|1QZ0|B Chain B, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|2I42|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
Complexed With Vanadate, A Transition State Analogue
pdb|1YTN|A Chain A, Hydrolase
pdb|1YTW|A Chain A, Yersinia Ptpase Complexed With Tungstate
pdb|2Y2F|A Chain A, Crystal Structure Of Yersinia Pestis Yoph In Complex With
An Aminooxy-Containing Platform Compound For Inhibitor
Design
pdb|2YDU|A Chain A, Crystal Structure Of Yoph In Complex With
3-(1,1-Dioxido-3-Oxoisothiazolidin-5-Yl)benzaldeyde
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 100/260 (38%), Gaps = 69/260 (26%)
Query: 90 NRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDF 149
NR+ DI QC+ + A R +NA+ I ++ + IA Q PL E
Sbjct: 65 NRFRDI-----------QCR-RQTAVRADLNANYIQVGNT----RTIACQYPLQSQLESH 108
Query: 150 WEMVIQYHCPVIVML--TRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET--- 204
+ M+ + PV+ +L + + N + DYF R+ G G +T K T+
Sbjct: 109 FRMLAENRTPVLAVLASSSEIANQRF-GMPDYF------RQSGTYGSITVESKMTQQVGL 161
Query: 205 --ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPI 262
++ + +E+ + +SV + WPD T E+ K + +L
Sbjct: 162 GDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQ-----TAVSSEVTKALASLVDQTAET 216
Query: 263 ---------------------VVHCSAGIGRT----GAYCTIHNTVQRILVGDMSALDLA 297
V+HC AG+GRT GA C + ++ V DM
Sbjct: 217 KRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM------ 270
Query: 298 NTVKVFRSQRIG-MVQTMEQ 316
V R QR G MVQ EQ
Sbjct: 271 --VSQMRVQRNGIMVQKDEQ 288
>pdb|1XXV|A Chain A, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
pdb|1XXV|B Chain B, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 100/260 (38%), Gaps = 69/260 (26%)
Query: 90 NRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDF 149
NR+ DI QC+ + A R +NA+ I ++ + IA Q PL E
Sbjct: 65 NRFRDI-----------QCR-RQTAVRADLNANYIQVGNT----RTIACQYPLQSQLESH 108
Query: 150 WEMVIQYHCPVIVML--TRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET--- 204
+ M+ + PV+ +L + + N + DYF R+ G G +T K T+
Sbjct: 109 FRMLAENRTPVLAVLASSSEIANQRF-GMPDYF------RQSGTYGSITVESKMTQQVGL 161
Query: 205 --ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPI 262
++ + +E+ + +SV + WPD T E+ K + +L
Sbjct: 162 GDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQ-----TAVSSEVTKALASLVDQTAET 216
Query: 263 ---------------------VVHCSAGIGRT----GAYCTIHNTVQRILVGDMSALDLA 297
V+HC AG+GRT GA C + ++ V DM
Sbjct: 217 KRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM------ 270
Query: 298 NTVKVFRSQRIG-MVQTMEQ 316
V R QR G MVQ EQ
Sbjct: 271 --VSQMRVQRNGIMVQKDEQ 288
>pdb|3U96|A Chain A, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
pdb|3U96|B Chain B, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 100/260 (38%), Gaps = 69/260 (26%)
Query: 90 NRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDF 149
NR+ DI QC+ + A R +NA+ I ++ + IA Q PL E
Sbjct: 65 NRFRDI-----------QCR-RQTAVRADLNANYIQVGNT----RTIACQYPLQSQLESH 108
Query: 150 WEMVIQYHCPVIVML--TRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET--- 204
+ M+ + PV+ +L + + N + DYF R+ G G +T K T+
Sbjct: 109 FRMLAENRTPVLAVLASSSEIANQRF-GMPDYF------RQSGTYGSITVESKMTQQVGL 161
Query: 205 --ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPI 262
++ + +E+ + +SV + WPD T E+ K + +L
Sbjct: 162 GDGIMADMYTLTIREAGQKTISVPVVHVGNWPDF-----TAVSSEVTKALASLVDQTAET 216
Query: 263 ---------------------VVHCSAGIGRT----GAYCTIHNTVQRILVGDMSALDLA 297
V+HC AG+GRT GA C + ++ V DM
Sbjct: 217 KRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM------ 270
Query: 298 NTVKVFRSQRIG-MVQTMEQ 316
V R QR G MVQ EQ
Sbjct: 271 --VSQMRVQRNGIMVQKDEQ 288
>pdb|3BM8|A Chain A, Crystal Structure Of Yoph Mutant D356a Complexed With
Irreversible Inhibitor Pvsn
Length = 305
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 69/260 (26%)
Query: 90 NRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDF 149
NR+ DI QC+ + A R +NA+ I ++ + IA Q PL E
Sbjct: 64 NRFRDI-----------QCR-RQTAVRADLNANYIQVGNT----RTIACQYPLQSQLESH 107
Query: 150 WEMVIQYHCPVIVML--TRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET--- 204
+ M+ + PV+ +L + + N + DYF R+ G G +T K T+
Sbjct: 108 FRMLAENRTPVLAVLASSSEIANQRF-GMPDYF------RQSGTYGSITVESKMTQQVGL 160
Query: 205 --ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPI 262
++ + +E+ + +SV + WP T E+ K + +L
Sbjct: 161 GDGIMADMYTLTIREAGQKTISVPVVHVGNWPAQ-----TAVSSEVTKALASLVDQTAET 215
Query: 263 ---------------------VVHCSAGIGRT----GAYCTIHNTVQRILVGDMSALDLA 297
V+HC AG+GRT GA C + ++ V DM
Sbjct: 216 KRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM------ 269
Query: 298 NTVKVFRSQRIG-MVQTMEQ 316
V R QR G MVQ EQ
Sbjct: 270 --VSQMRVQRNGIMVQKDEQ 287
>pdb|3F99|A Chain A, W354f Yersinia Enterocolitica Ptpase Apo Form
pdb|3F9A|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Tungstate
pdb|3F9B|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Divanadate
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 100/260 (38%), Gaps = 69/260 (26%)
Query: 90 NRYTDILPFDKNRVVLKQCKDYRPAARGYINASLISTSSSEKVSQFIATQGPLPHTYEDF 149
NR+ DI QC+ + A R +NA+ I ++ + IA Q PL E
Sbjct: 65 NRFRDI-----------QCR-RQTAVRADLNANYIQVGNT----RTIACQYPLQSQLESH 108
Query: 150 WEMVIQYHCPVIVML--TRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTTET--- 204
+ M+ + PV+ +L + + N + DYF R+ G G +T K T+
Sbjct: 109 FRMLAENRTPVLAVLASSSEIANQRF-GMPDYF------RQSGTYGSITVESKMTQQVGL 161
Query: 205 --ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFGPI 262
++ + +E+ + +SV + +PD T E+ K + +L
Sbjct: 162 GDGIMADMYTLTIREAGQKTISVPVVHVGNFPDQ-----TAVSSEVTKALASLVDQTAET 216
Query: 263 ---------------------VVHCSAGIGRT----GAYCTIHNTVQRILVGDMSALDLA 297
V+HC AG+GRT GA C + ++ V DM
Sbjct: 217 KRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDM------ 270
Query: 298 NTVKVFRSQRIG-MVQTMEQ 316
V R QR G MVQ EQ
Sbjct: 271 --VSQMRVQRNGIMVQKDEQ 288
>pdb|1G4U|S Chain S, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp Bound To Rac1
pdb|1G4W|R Chain R, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp
Length = 383
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 143 PHTYEDFWEMVIQYHCPVIVMLTRLVDNYKMVKCGDYFQAEDGPREFGNIGIVTKWIKTT 202
P E +M+++ C +V+LT D + + YF+ G FG + ++ + +
Sbjct: 194 PDALEAHMKMLLEKECSCLVVLTS-EDQMQAKQLPPYFR---GSYTFGEVHTNSQKVSSA 249
Query: 203 ET--ALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVPRDTLAVREILKRIYNLPPNFG 260
A+ N++++ E + VLH++ WPDH T + + R+ N N
Sbjct: 250 SQGEAIDQYNMQLSCGEKRYT-IPVLHVK--NWPDHQPLPSTDQLEYLADRVKNSNQNGA 306
Query: 261 P---------IVVHCSAGIGRTGAYC 277
P ++HC G+GRTG
Sbjct: 307 PGRSSSDKHLPMIHCLGGVGRTGTMA 332
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSA 293
PD GVP D+ + I+K + L G +V HC GIGRTG + +
Sbjct: 68 PDGGVPSDSQFLT-IMK--WLLSEKEGNLV-HCVGGIGRTGTILASYLILT-------EG 116
Query: 294 LDLANTVKVFRSQRIGMVQTMEQYIFC 320
L++ + + R R G VQT EQ +F
Sbjct: 117 LEVESAIDEVRLVRPGAVQTYEQEMFL 143
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 234 PDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSA 293
PD GVP D+ + I+K + L G +V H GIGRTG + +
Sbjct: 68 PDGGVPSDSQFLT-IMK--WLLSEKEGNLV-HSVGGIGRTGTILASYLILT-------EG 116
Query: 294 LDLANTVKVFRSQRIGMVQTMEQYIFC 320
L++ + + R R G VQT EQ +F
Sbjct: 117 LEVESAIDEVRLVRPGAVQTYEQEMFL 143
>pdb|1FPZ|A Chain A, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|B Chain B, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|C Chain C, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|D Chain D, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|E Chain E, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|F Chain F, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FQ1|A Chain A, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
Length = 212
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 235 DHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSAL 294
D G P D + EI++ + N+ ++H G+GR+ C + + L +S
Sbjct: 110 DGGTP-DIASCCEIMEELTTCLKNYRKTLIHSYGGLGRS---CLVAACLLLYLSDTISPE 165
Query: 295 DLANTVKVFRSQRIGMVQTMEQYIFCHQAIVDELEDLISGFNSERTSK 342
++++ R G +QT++QY + H E D ++ S R S+
Sbjct: 166 QAIDSLRDLRGS--GAIQTIKQYNYLH-----EFRDKLAAHLSSRDSQ 206
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 233 WPDHGVPRDTLAVREILKRIYNLPPNFGPIVVHCSAGIGRTG 274
+ D P D + V+E L N G I VHC AG+GRTG
Sbjct: 247 FADGSTPTDAI-VKEFLDICENAE---GAIAVHCKAGLGRTG 284
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Query: 256 PPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMV-QTM 314
PP G VHC AG+GR I + + G++SALD + + R +R G + QT
Sbjct: 109 PPTIG---VHCVAGLGRA----PILVALALVEYGNVSALD---AIALIREKRKGAINQTQ 158
Query: 315 EQYI 318
+I
Sbjct: 159 XHWI 162
>pdb|2HJ3|A Chain A, Structure Of The Arabidopsis Thaliana Erv1 Thiol Oxidase
pdb|2HJ3|B Chain B, Structure Of The Arabidopsis Thaliana Erv1 Thiol Oxidase
Length = 125
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 223 MSVLHIQYPEWPDHGVPRDTLAVREILKRIY---NLPPNFGPIVVHCSAGIGRTGAY--- 276
+ L QYPE P +D + IL R+Y +F I+ A G +
Sbjct: 21 LHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRSNPAQAGSQEEFSQW 80
Query: 277 -CTIHNTVQRIL 287
C +HNTV R L
Sbjct: 81 LCHVHNTVNRSL 92
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 14/15 (93%)
Query: 261 PIVVHCSAGIGRTGA 275
P++VHC+AG+ R+GA
Sbjct: 127 PVLVHCAAGVNRSGA 141
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 262 IVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQ 316
+ VHC+ G GRTG + +R L + + R R G ++T EQ
Sbjct: 92 VGVHCALGFGRTGTXLACYLVKER-------GLAAGDAIAEIRRLRPGSIETYEQ 139
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 262 IVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTMEQ 316
+ VHC+ G GRTG + +R L + + R R G ++T EQ
Sbjct: 91 VGVHCALGFGRTGTMLACYLVKER-------GLAAGDAIAEIRRLRPGSIETYEQ 138
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 228 IQYPEWPDHGVPRDTLA--VREILKRIYNLPPNFGPIVVHCSAGIGRTGAYC 277
IQY + P P L I I+++ G ++HC+AG+ R+ A C
Sbjct: 64 IQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALC 115
>pdb|3PEF|A Chain A, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase
From Geobacter Metallireducens In Complex With Nadp+
pdb|3PEF|B Chain B, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase
From Geobacter Metallireducens In Complex With Nadp+
pdb|3PEF|C Chain C, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase
From Geobacter Metallireducens In Complex With Nadp+
pdb|3PEF|D Chain D, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase
From Geobacter Metallireducens In Complex With Nadp+
pdb|3PEF|E Chain E, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase
From Geobacter Metallireducens In Complex With Nadp+
pdb|3PEF|F Chain F, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase
From Geobacter Metallireducens In Complex With Nadp+
pdb|3PEF|G Chain G, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase
From Geobacter Metallireducens In Complex With Nadp+
pdb|3PEF|H Chain H, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase
From Geobacter Metallireducens In Complex With Nadp+
Length = 287
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 52 NKSREISQEFARLQASRIK-PSEMARGCTVALDGVNLSKNRYTDILPFDKNRVVLKQCKD 110
N+S E ++E A L A R P E+ C V L+ + + F K+ V+ +
Sbjct: 31 NRSPEKAEELAALGAERAATPXEVVESCPVTF--AMLADPAAAEEVCFGKHGVL-----E 83
Query: 111 YRPAARGYINASLISTSSSEKVSQFIATQG 140
RGY++ S + ++S+++ + +G
Sbjct: 84 GIGEGRGYVDMSTVDPATSQRIGVAVVAKG 113
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With
D-Alanine Adenylate
Length = 512
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 195 VTKWIKTT--ETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVP 239
+ KW T +TA V R+ ++ YK+ +E ++ H E+PD P
Sbjct: 7 IEKWAAETPDQTAFVWRDAKITYKQLKEDSDALAHWISSEYPDDRSP 53
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And
Magnesium
pdb|3FCE|A Chain A, Crystal Structure Of Bacillus Cereus D-Alanyl Carrier
Protein Ligase Dlta In Complex With Atp: Implications
For Adenylation Mechanism
Length = 512
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 195 VTKWIKTT--ETALVLRNLEVNYKESEEPPMSVLHIQYPEWPDHGVP 239
+ KW T +TA V R+ ++ YK+ +E ++ H E+PD P
Sbjct: 7 IEKWAAETPDQTAFVWRDAKITYKQLKEDSDALAHWISSEYPDDRSP 53
>pdb|2CYB|A Chain A, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
With L-Tyrosine From Archaeoglobus Fulgidus
pdb|2CYB|B Chain B, Crystal Structure Of Tyrosyl-Trna Synthetase Complexed
With L-Tyrosine From Archaeoglobus Fulgidus
Length = 323
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 253 YNLPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTV 300
Y++ P FG IVV A G Y + + G + LDL V
Sbjct: 257 YHILPRFGKIVVERDAKFGGDVEYASFEELAEDFKSGQLHPLDLKIAV 304
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 199 IKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWP-DHGVPRDTLAVRE---ILKRIYN 254
+K V+R EV Y ++ P+ I +WP D G P V + ++K +
Sbjct: 37 LKKYGATTVVRVCEVTYDKT---PLEKDGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFC 93
Query: 255 LPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTM 314
P + VHC AG+GR V L S + + ++ R +R G + +
Sbjct: 94 EAPG-SCVAVHCVAGLGRA--------PVLVALALIESGMKYEDAIQFIRQKRRGAINSK 144
Query: 315 E 315
+
Sbjct: 145 Q 145
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 199 IKTTETALVLRNLEVNYKESEEPPMSVLHIQYPEWP-DHGVPRDTLAVRE---ILKRIYN 254
+K V+R EV Y ++ P+ I +WP D G P V + ++K +
Sbjct: 40 LKKYGATTVVRVCEVTYDKT---PLEKDGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFC 96
Query: 255 LPPNFGPIVVHCSAGIGRTGAYCTIHNTVQRILVGDMSALDLANTVKVFRSQRIGMVQTM 314
P + VHC AG+GR V L S + + ++ R +R G + +
Sbjct: 97 EAPG-SCVAVHCVAGLGRA--------PVLVALALIESGMKYEDAIQFIRQKRRGAINSK 147
Query: 315 E 315
+
Sbjct: 148 Q 148
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,794,727
Number of Sequences: 62578
Number of extensions: 378176
Number of successful extensions: 1446
Number of sequences better than 100.0: 126
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 922
Number of HSP's gapped (non-prelim): 132
length of query: 343
length of database: 14,973,337
effective HSP length: 100
effective length of query: 243
effective length of database: 8,715,537
effective search space: 2117875491
effective search space used: 2117875491
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)