BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019278
(343 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 359 bits (922), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 226/304 (74%), Gaps = 8/304 (2%)
Query: 28 KPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVL 87
+PPVA GLS+ FY Q+CP+ ESIVR+ +Q A++KDIGLAAGL+R+HFHDCFVQGCD SVL
Sbjct: 2 EPPVAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVL 61
Query: 88 LEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKEC-GRVVSCADILALAARDSVALS 143
L+GS + EQ A PNL+LR A K V+D+R R+ +EC G VVSC+DILALAARDSV +S
Sbjct: 62 LDGSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVS 121
Query: 144 GGPNYDLPLGRRDSKTFAT----VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTV 199
GGP+Y +PLGRRDS++FA+ + +LP P SN +L +A + V +SGGHT+
Sbjct: 122 GGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTI 181
Query: 200 GLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLM 259
GLAHC +F +RL+P+ DPT+ TF + LK+TCP ++ TV D+R+PNVFDNKYY+DL+
Sbjct: 182 GLAHCSSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVLDVRTPNVFDNKYYIDLV 241
Query: 260 NRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
NR+GL SDQDL+T+ TR IV FA Q FF++F S+ KM Q+ V T QGE+R C
Sbjct: 242 NREGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNC 301
Query: 320 SVKN 323
SV+N
Sbjct: 302 SVRN 305
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 184/299 (61%), Gaps = 15/299 (5%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE--GST 92
L+ TFY +CP +IVR IQ AL+ D + A LIR+HFHDCFV GCD S+LL+ GS
Sbjct: 3 LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62
Query: 93 -SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLP 151
SE+NA PN++ VD+++ + C VVSC+D+LALA+ SV+L+GGP++ +
Sbjct: 63 QSEKNAGPNVN-SARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVL 121
Query: 152 LGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 208
LGRRDS T ++PSP + + I F N + VALSG HT G A C F
Sbjct: 122 LGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFN 181
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNT-TVFDIRSPNVFDNKYYVDLMNRQ 262
NRL+ DPTL+ T + L++ CP + S +T T D+ +P+ FDN Y+ +L +
Sbjct: 182 NRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSND 241
Query: 263 GLLTSDQDLY--TDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GLL SDQ+L+ T T +IVTSFA +Q+LFFQ FA SMI M +S LTG GEIR C
Sbjct: 242 GLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 300
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 248 bits (632), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 188/305 (61%), Gaps = 17/305 (5%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS--- 91
L FY+ SCP ES+V++ + A + G+A GLIR+HFHDCFV+GCD SVLL+ +
Sbjct: 2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 92 TSEQNARPN-LSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDL 150
T+E++A PN SLR + + ++ V C + VSCADILA AARDS L+G Y +
Sbjct: 62 TAEKDAIPNNPSLR--GFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQV 119
Query: 151 PLGRRDSK-TFATVVN--LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 207
P GRRD + A+ N +PSP N T ++N F KT A E V LSG H++G+AHC +F
Sbjct: 120 PSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSF 179
Query: 208 TNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV---FDIRSPNVFDNKYYVDLM 259
TNRLY DPTL ++A L+ TCP + + T + DI +P+V DN YY +
Sbjct: 180 TNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQ 239
Query: 260 NRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GLLTSDQ L T+ + V + A++ + + +FA +M+KM Q+ VLTG QGEIR C
Sbjct: 240 LTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNC 299
Query: 320 SVKNS 324
SV NS
Sbjct: 300 SVVNS 304
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 246 bits (629), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 187/297 (62%), Gaps = 12/297 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS--- 91
LS FY CP S ++ + +A+ K+ + A L+R+HFHDCFVQGCD SVLL+ +
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 92 TSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDL 150
T E+ A PN S+R + +D ++++V C VVSCADILA+AARDSV GG ++++
Sbjct: 62 TGEKTAGPNANSIR--GFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNV 119
Query: 151 PLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 207
LGRRDS T + +LP+PF N + +++ F K F +E V LSG HT+G A C AF
Sbjct: 120 LLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAF 179
Query: 208 TNRLYPKQDPTLDKTFANNLKKTCPTSDSN-NTTVFDIRSPNVFDNKYYVDLMNRQGLLT 266
R+Y + + +D T+A +L+ CP+ + N + FD+ +PN FDN YY++L N++GLL
Sbjct: 180 RTRIYNESN--IDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLH 237
Query: 267 SDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN 323
SDQ L+ T S VT+++ + + F +F N+MIKM LS LTG G+IR C N
Sbjct: 238 SDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 244 bits (622), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 192/317 (60%), Gaps = 18/317 (5%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 2 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 62 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 121
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VALSGGHT G C
Sbjct: 122 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIM 181
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 182 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 241
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 242 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 301
Query: 320 SVKNSNNLASVVEDVIE 336
V NSN S++ D++E
Sbjct: 302 RVVNSN---SLLHDMVE 315
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 182/302 (60%), Gaps = 15/302 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
LS Y +SCP L IVRKQ+ ALK +I +AA LIR+HFHDCFV GCD S+LL+G+ SE
Sbjct: 2 LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADSE 61
Query: 95 QNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGR 154
+ A PN++ + +D ++A V C VVSCADIL LAARDSV LSGGP + + LGR
Sbjct: 62 KLAIPNIN-SARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGR 120
Query: 155 RDSKTF--ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 212
+D + NLPSPF I+ F N + VALSG HT G A C F+NRL+
Sbjct: 121 KDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLF 180
Query: 213 -----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLT 266
D TL+ + +NL+ CP ++N T D + + FDN Y+ +L+ +GLL+
Sbjct: 181 NFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLS 240
Query: 267 SDQDLYTD----KRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVK 322
SDQ L++ T+ +V +++ QSLFF++F +MI+M +S G GE+R C V
Sbjct: 241 SDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRVI 298
Query: 323 NS 324
N+
Sbjct: 299 NN 300
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 186/306 (60%), Gaps = 15/306 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 3 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 63 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 122
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VALSGGHT G C +
Sbjct: 123 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRSIM 182
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 183 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 242
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 243 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 302
Query: 320 SVKNSN 325
V NSN
Sbjct: 303 RVVNSN 308
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 240 bits (613), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 185/306 (60%), Gaps = 15/306 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 2 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 62 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 121
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VALSGGHT G C
Sbjct: 122 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIM 181
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 182 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 241
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 242 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 301
Query: 320 SVKNSN 325
V NSN
Sbjct: 302 RVVNSN 307
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 240 bits (613), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 185/306 (60%), Gaps = 15/306 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 3 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 63 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 122
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VALSGGHT G C
Sbjct: 123 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIM 182
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 183 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 242
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 243 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 302
Query: 320 SVKNSN 325
V NSN
Sbjct: 303 RVVNSN 308
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 240 bits (612), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 184/306 (60%), Gaps = 15/306 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 3 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 63 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 122
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP PF + + FR N + + VALSGGHT G C
Sbjct: 123 GRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIM 182
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 183 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 242
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 243 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 302
Query: 320 SVKNSN 325
V NSN
Sbjct: 303 RVVNSN 308
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 240 bits (612), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 184/306 (60%), Gaps = 15/306 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 3 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 63 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 122
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP PF + + FR N + + VALSGGHT G C
Sbjct: 123 GRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIM 182
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 183 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 242
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 243 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 302
Query: 320 SVKNSN 325
V NSN
Sbjct: 303 RVVNSN 308
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 185/306 (60%), Gaps = 15/306 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 2 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 62 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 121
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VALSGGH+ G C
Sbjct: 122 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRFIM 181
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 182 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 241
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 242 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 301
Query: 320 SVKNSN 325
V NSN
Sbjct: 302 RVVNSN 307
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 184/305 (60%), Gaps = 15/305 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 2 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 62 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 121
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VALSGGHT G C
Sbjct: 122 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIM 181
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 182 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 241
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 242 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 301
Query: 320 SVKNS 324
V NS
Sbjct: 302 RVVNS 306
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 184/306 (60%), Gaps = 15/306 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 3 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 62
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 63 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 122
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VALSGGHT G C
Sbjct: 123 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIM 182
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V D+R+P +FDNKYYV+L ++
Sbjct: 183 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNLEEQK 242
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 243 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 302
Query: 320 SVKNSN 325
V NSN
Sbjct: 303 RVVNSN 308
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 237 bits (605), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 184/306 (60%), Gaps = 15/306 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HF DCFV GCD S+LL+ +TS
Sbjct: 3 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTSF 62
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 63 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 122
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VALSGGHT G C
Sbjct: 123 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIM 182
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 183 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 242
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 243 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 302
Query: 320 SVKNSN 325
V NSN
Sbjct: 303 RVVNSN 308
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 183/305 (60%), Gaps = 15/305 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++R+HFHDCFV GCD S+LL+ +TS
Sbjct: 2 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSF 61
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 62 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 121
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VAL GGHT G C
Sbjct: 122 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRFIM 181
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 182 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 241
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 242 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 301
Query: 320 SVKNS 324
V NS
Sbjct: 302 RVVNS 306
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 183/306 (59%), Gaps = 15/306 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L+ TFYD SCP + +IVR I N L+ D +AA ++ +HF DCFV GCD S+LL+ +TS
Sbjct: 2 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTSF 61
Query: 95 QNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPL 152
+ + A F +D ++A V C R VSCAD+L +AA+ SV L+GGP++ +PL
Sbjct: 62 RTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPL 121
Query: 153 GRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 208
GRRDS + F + NLP+PF + + FR N + + VALSGGHT G C
Sbjct: 122 GRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIM 181
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
+RLY DPTL+ T+ L+ CP + + + V FD+R+P +FDNKYYV+L ++
Sbjct: 182 DRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQK 241
Query: 263 GLLTSDQDLYTDKR---TRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GL+ SDQ+L++ T +V SFA FF F +M +M ++ LTG QG+IR C
Sbjct: 242 GLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNC 301
Query: 320 SVKNSN 325
V NSN
Sbjct: 302 RVVNSN 307
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 234 bits (596), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 181/303 (59%), Gaps = 15/303 (4%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS--- 91
L+ TFY +CP ++VR +Q A + D + A LIR+HFHDCFV GCD S+LL+ S
Sbjct: 4 LNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSGSI 63
Query: 92 TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLP 151
SE+NA PN + VD+++ + C VVSC D+LALA++ SV+LSGGP++ +
Sbjct: 64 ISEKNAGPNAN-SARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTVD 122
Query: 152 LGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 208
LGRRD+ T ++PSP + I + F N + VALSG HT G A C F+
Sbjct: 123 LGRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCGVFS 182
Query: 209 NRLY-----PKQDPTLDKTFANNLKKTCPTSD-SNNTTVFDIRSPNVFDNKYYVDLMNRQ 262
NRL+ DPTL+ T + L++ CP + +T D+ +P+ FDN Y+ +L +
Sbjct: 183 NRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNYFTNLQSNN 242
Query: 263 GLLTSDQDLY--TDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCS 320
GLL SDQ+L+ T T +IVTSFA +Q+LFFQ FA SMI M +S LTG GEIR C
Sbjct: 243 GLLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSSGEIRLDCK 302
Query: 321 VKN 323
N
Sbjct: 303 KTN 305
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 231 bits (589), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 183/304 (60%), Gaps = 17/304 (5%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS--- 91
L+ TFY ++CP L IV I +A D + A L+R+HFHDCFVQGCDGSVLL +
Sbjct: 2 LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61
Query: 92 TSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDL 150
SEQ+A PN+ S+R L V+D++ V C VSCADILA+AA + L GGP + +
Sbjct: 62 ESEQDALPNINSIR--GLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPV 119
Query: 151 PLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 207
PLGRRDS T + NLP+PF N T + F + N + V LSGGHT G A C F
Sbjct: 120 PLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTF 179
Query: 208 TNRLY-----PKQDPTLDKTFANNLKKTCP-TSDSNNTTVFDIRSPNVFDNKYYVDLMNR 261
NRLY DPTL+ T+ L+ CP + +N T D+ +P+ FDN+YY +L+
Sbjct: 180 INRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQL 239
Query: 262 QGLLTSDQDLYT--DKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
GLL SDQ+L++ T IV SF+ +Q+ FF F SMIKM + VLTG +GEIR +C
Sbjct: 240 NGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQC 299
Query: 320 SVKN 323
+ N
Sbjct: 300 NFVN 303
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 35/192 (18%)
Query: 120 KECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILND 179
KE +VS AD LA +V ++GGP GR D LP + + +
Sbjct: 84 KEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDV 143
Query: 180 F-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNN 238
F + + ++ VALSGGHT+G AH K+ + + +N
Sbjct: 144 FGKAMGLSDQDIVALSGGHTIGAAH----------KERSGFEGPWTSN------------ 181
Query: 239 TTVFDIRSPNVFDNKYYVDLM--NRQGLL--TSDQDLYTDKRTRSIVTSFAVDQSLFFQE 294
P +FDN Y+ +L+ + GLL SD+ L TD R +V +A D+ +FF +
Sbjct: 182 --------PLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFAD 233
Query: 295 FANSMIKMSQLS 306
+A + +K+S+L
Sbjct: 234 YAEAHLKLSELG 245
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 76 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 130
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 131 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 180
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 181 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 220
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 221 DKYAADEDAFFADYAEAHQKLSELG 245
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 76 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 130
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 131 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 180
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 181 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 220
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 221 DKYAADEDAFFADYAEAHQKLSELG 245
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 88 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 142
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 143 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KEASGFEGPWTS 192
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 193 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 232
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 233 DKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 76 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 130
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 131 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 180
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 181 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 220
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 221 DKYAADEDAFFADYAEAHQKLSELG 245
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 88 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 142
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 143 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 192
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 193 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 232
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 233 DKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 88 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 142
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 143 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 192
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 193 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 232
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 233 DKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 88 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 142
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 143 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 192
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 193 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 232
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 233 DKYAADEDAFFADYAEAHQKLSELG 257
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 88 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 142
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 143 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 192
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 193 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 232
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 233 DKYAADEDAFFADYAEAHQKLSELG 257
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 76 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 130
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 131 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 180
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 181 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 220
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 221 DKYAADEDAFFADYAEAHQKLSELG 245
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 88 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 142
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 143 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 192
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 193 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 232
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 233 DKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 40/205 (19%)
Query: 107 ALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNL 166
A++ ++ L+A ++S AD LA +V ++GGP GR D L
Sbjct: 88 AVRLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRL 142
Query: 167 PSPFSNTTVILNDF-REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P + + + F + ++ VALSGGHT+G AH K+ + + +
Sbjct: 143 PDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH----------KERSGFEGPWTS 192
Query: 226 NLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN--RQGLL--TSDQDLYTDKRTRSIV 281
N P +FDN Y+ +L++ ++GLL SD+ L +D R +V
Sbjct: 193 N--------------------PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVFRPLV 232
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
+A D+ FF ++A + K+S+L
Sbjct: 233 DKYAADEDAFFADYAEAHQKLSELG 257
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 111/270 (41%), Gaps = 34/270 (12%)
Query: 51 VRKQIQNALKKDIGLAAGLIRIHFH-----DCFVQGCDGSVLLEGSTSEQNARPNLSLRK 105
+R I++ + + + L LIR+ +H DCF + +GS + + R
Sbjct: 12 LRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--------DGSPNSASMRFKPECLY 63
Query: 106 EALKFVDDLRARVH--KECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATV 163
K +D R + K+ +S AD+ LAA ++ GGP GR D+K +
Sbjct: 64 AGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVC 123
Query: 164 V---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLD 220
LP + + FR FN +ETVAL G HT G H F+ P T D
Sbjct: 124 GPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHI-EFSGYHGPW---THD 179
Query: 221 KTFANNLKKTCPTSDSNNTTVFD---IRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRT 277
K +N S T + D + +P V + + +L SD L D
Sbjct: 180 KNGFDN---------SFFTQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLDPSY 230
Query: 278 RSIVTSFAVDQSLFFQEFANSMIKMSQLSV 307
R V +A D F ++FAN+ K+++L
Sbjct: 231 RKYVELYAKDNDRFNKDFANAFKKLTELGT 260
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 111/270 (41%), Gaps = 34/270 (12%)
Query: 51 VRKQIQNALKKDIGLAAGLIRIHFH-----DCFVQGCDGSVLLEGSTSEQNARPNLSLRK 105
+R I++ + + + L LIR+ +H DCF + +GS + + R
Sbjct: 11 LRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--------DGSPNSASMRFKPECLY 62
Query: 106 EALKFVDDLRARVH--KECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATV 163
K +D R + K+ +S AD+ LAA ++ GGP GR D+K +
Sbjct: 63 AGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVC 122
Query: 164 V---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLD 220
LP + + FR FN +ETVAL G HT G H F+ P T D
Sbjct: 123 GPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHI-EFSGYHGPW---THD 178
Query: 221 KTFANNLKKTCPTSDSNNTTVFD---IRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRT 277
K +N S T + D + +P V + + +L SD L D
Sbjct: 179 KNGFDN---------SFFTQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLDPSY 229
Query: 278 RSIVTSFAVDQSLFFQEFANSMIKMSQLSV 307
R V +A D F ++FAN+ K+++L
Sbjct: 230 RKYVELYAKDNDRFNKDFANAFKKLTELGT 259
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 111/270 (41%), Gaps = 34/270 (12%)
Query: 51 VRKQIQNALKKDIGLAAGLIRIHFH-----DCFVQGCDGSVLLEGSTSEQNARPNLSLRK 105
+R I++ + + + L LIR+ +H DCF + +GS + + R
Sbjct: 12 LRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--------DGSPNSASMRFKPECLY 63
Query: 106 EALKFVDDLRARVH--KECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATV 163
K +D R + K+ +S AD+ LAA ++ GGP GR D+K +
Sbjct: 64 AGNKGLDIPRKALETLKKKYPQISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVC 123
Query: 164 V---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLD 220
LP + + FR FN +ETVAL G HT G H F+ P T D
Sbjct: 124 GPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGETHI-EFSGYHGPW---THD 179
Query: 221 KTFANNLKKTCPTSDSNNTTVFD---IRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRT 277
K +N S T + D + +P V + + +L SD L D
Sbjct: 180 KNGFDN---------SFFTQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLDPSY 230
Query: 278 RSIVTSFAVDQSLFFQEFANSMIKMSQLSV 307
R V +A D F ++FAN+ K+++L
Sbjct: 231 RKYVELYAKDNDRFNKDFANAFKKLTELGT 260
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 100/266 (37%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G HT+G KT N P +
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHTLG--------------------KTHLKNSGYEGPWT- 192
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+PNVFDN +Y++L+N +L +D L D +
Sbjct: 193 ---------ANPNVFDNSFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 102/266 (38%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VALSG HT+G KT N P +
Sbjct: 154 VRTFFQRLNMNDREVVALSGAHTLG--------------------KTHLKNSGYEGPWTA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMN-----------------RQGLLT--SDQDLYTDKR 276
+N NVFDN +Y++L+N + G L +D L D +
Sbjct: 194 NN----------NVFDNSFYLNLLNEDWKLEKNDANNEQWDSKSGYLQLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 100/266 (37%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G HT+G KT N P +
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHTLG--------------------KTHLKNSGYEGPWTA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VFDN +Y++L+N +L +D L D +
Sbjct: 194 NNN----------VFDNSFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 99/266 (37%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G HT+G KT N P
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHTLG--------------------KTHLKNSGYEGPWDA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VFDN +Y++L+N +L +D L D +
Sbjct: 194 TNN----------VFDNSFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 23/194 (11%)
Query: 126 VSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLP--SPFSNTTVILNDF 180
V+ AD+ LA+ ++ +GGP + GR D + LP P S + + F
Sbjct: 87 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVF 146
Query: 181 REKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTT 240
N +E VALSG HT+G + P + P+ T D A P S
Sbjct: 147 YRMGLNDKEIVALSGAHTLGRSR-PDRSGWGKPETKYTKDGPGA-------PGGQSWTAQ 198
Query: 241 VFDIRSPNVFDNKYYVDLMNRQG----LLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFA 296
FDN Y+ D+ R+ +L +D L+ D + +A D FF+++A
Sbjct: 199 WLK------FDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYAEKYAADPEAFFKDYA 252
Query: 297 NSMIKMSQLSVLTG 310
+ K+S L G
Sbjct: 253 EAHAKLSNLGAKFG 266
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 101/266 (37%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G HT+G KT N P +
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHTLG--------------------KTHLKNSGYEGPWTA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMN-----------------RQGLLT--SDQDLYTDKR 276
+N NVFDN +Y++L+N + G L +D L D +
Sbjct: 194 NN----------NVFDNSFYLNLLNEDWKLEKNDANNEQWDSKSGYLQLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N+YY++L+N +L +D L
Sbjct: 188 WGAANN----------VFTNEYYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ FH + G D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAFH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 95
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 96 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 193 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALKGAHALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 188 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 98/266 (36%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 96
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 IHKEF-PWISSGDLFSLGGVTAVQEWQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 155
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 156 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 195
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 196 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 245
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 246 YLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 40 IGYGDDLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 93
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 191 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 95
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 96 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 193 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 95
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 96 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 193 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYIMLPTDYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 93
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 191 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 95
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 96 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 193 QGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 188 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 43 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 96
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 153
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 193
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 194 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 243
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 244 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 272
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 93
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 191 GGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 188 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 188 QGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 93
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 191 GGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 95
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 96 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 193 GGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPELVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTELKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 188 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 188 YGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 98/266 (36%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 39 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 93
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 152
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 153 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 192
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 193 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 242
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 243 YLSIVKEYANDQDKFFKDFSKAFEKL 268
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 52/206 (25%)
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGY 155
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 156 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 195
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 196 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 245
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 246 YLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 38 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 91
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 92 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 148
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 149 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 188
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 189 GGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 238
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 239 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 267
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 188 GGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 98/266 (36%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 194 ANN----------VFTNEFYLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 98/266 (36%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 194 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 52/206 (25%)
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 92 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGY 150
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 151 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 190
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 191 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 240
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 241 YLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 98/266 (36%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 194 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 52/206 (25%)
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 155
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 156 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 195
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 196 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 245
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 246 YLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 52/206 (25%)
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGY 155
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 156 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 195
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 196 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 245
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 246 YLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 98/266 (36%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 194 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 52/206 (25%)
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGY 155
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 156 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 195
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 196 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 245
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 246 YLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 93
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDYDKD 150
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 191 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 95
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 96 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 193 FGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 95
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 96 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPDNGRLPDADKD 152
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 193 WGCANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 76/206 (36%), Gaps = 52/206 (25%)
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G H N P
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHALGKTHL--------------------KNSGYEGPWGA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN VF N++Y++L+N +L +D L D +
Sbjct: 194 ANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 93
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDMDKD 150
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 191 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 101/264 (38%), Gaps = 60/264 (22%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 38 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 91
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 92 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 148
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCP-----------AFTNRLY---PKQDPT 218
+ F+ N RE VAL G H +G H FTN Y +D
Sbjct: 149 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWK 208
Query: 219 LDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTR 278
L+K ANN + +D +S + +L +D L D +
Sbjct: 209 LEKNDANNEQ-------------WDSKSGYM--------------MLPTDYSLIQDPKYL 241
Query: 279 SIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 242 SIVKEYANDQDKFFKDFSKAFEKL 265
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 101/264 (38%), Gaps = 60/264 (22%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 43 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 96
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 153
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCP-----------AFTNRLY---PKQDPT 218
+ F+ N RE VAL G H +G H FTN Y +D
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWK 213
Query: 219 LDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTR 278
L+K ANN + +D +S + +L +D L D +
Sbjct: 214 LEKNDANNEQ-------------WDSKSGYM--------------MLPTDYSLIQDPKYL 246
Query: 279 SIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 247 SIVKEYANDQDKFFKDFSKAFEKL 270
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 101/264 (38%), Gaps = 60/264 (22%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCP-----------AFTNRLY---PKQDPT 218
+ F+ N RE VAL G H +G H FTN Y +D
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWK 207
Query: 219 LDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTR 278
L+K ANN + +D +S + +L +D L D +
Sbjct: 208 LEKNDANNEQ-------------WDSKSGYM--------------MLPTDYSLIQDPKYL 240
Query: 279 SIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 241 SIVKEYANDQDKFFKDFSKAFEKL 264
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a
pdb|4A6Z|A Chain A, Cytochrome C Peroxidase With Bound Guaiacol
Length = 296
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 96
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 155
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKT---CP 232
+ F+ N RE VAL G H +G H LK++ P
Sbjct: 156 VRTFFQRLNMNDREVVALMGAHALGKTH-----------------------LKRSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+N NVF N++Y++L+N +L +D L
Sbjct: 193 WGAAN----------NVFTNEFYLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 101/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMN-----------------RQGL--LTSDQDLYT 273
+NN VF N++Y++L+N + G L +D L
Sbjct: 188 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMHLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 43 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 96
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 153
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 193
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L ++ L
Sbjct: 194 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTEYSLIQ 243
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 244 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 272
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
Length = 296
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 96
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 155
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKT---CP 232
+ F+ N RE VAL G H +G H LK++ P
Sbjct: 156 VRTFFQRLNMNDREVVALMGAHALGKTH-----------------------LKRSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+N NVF N++Y++L+N +L +D L
Sbjct: 193 WGAAN----------NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C
Peroxidase Mutant N184r Y36a
Length = 294
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKT---CP 232
+ F+ N RE VAL G H +G H LK++ P
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHALGKTH-----------------------LKRSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+N NVF N++Y++L+N +L +D L
Sbjct: 191 WGAAN----------NVFTNEFYLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M25|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M26|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M27|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M28|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M29|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2A|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2B|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2C|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2D|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2E|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2F|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2G|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2H|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2I|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 91
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 92 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 150
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKT---CP 232
+ F+ N RE VAL G H +G H LK++ P
Sbjct: 151 VRTFFQRLNMNDREVVALMGAHALGKTH-----------------------LKRSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+N NVF N++Y++L+N +L +D L
Sbjct: 188 WGAAN----------NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 42 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 95
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 96 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 152
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 153 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 192
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L ++ L
Sbjct: 193 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTNYSLIQ 242
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 243 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 271
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 93
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L ++ L
Sbjct: 191 GGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTNYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 99/269 (36%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N+ Y++L+N +L +D L
Sbjct: 188 WGAANN----------VFTNEKYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop
pdb|1CCJ|A Chain A, Conformer Selection By Ligand Binding Observed With
Protein Crystallography
Length = 294
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 99/269 (36%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 93
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 150
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 151 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N+ Y++L+N +L +D L
Sbjct: 191 WGAANN----------VFTNEGYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site
pdb|2X08|A Chain A, Cytochrome C Peroxidase: Ascorbate Bound To The Engineered
Ascorbate Binding Site
Length = 293
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 39 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 93
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 94 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 152
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKT---CP 232
+ F+ N RE VAL G H +G H LK++ P
Sbjct: 153 VRTFFQRLNMNDREVVALMGAHALGKTH-----------------------LKRSGYEGP 189
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+N NVF N++Y++L+N +L +D L
Sbjct: 190 FGAAN----------NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 239
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 240 DPKYLSIVKEYANDQDRFFKDFSKAFEKL 268
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome
C Peroxidase
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 79/209 (37%), Gaps = 58/209 (27%)
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 88 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 146
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKT---CP 232
+ F+ N RE VAL G H +G H LK++ P
Sbjct: 147 VRTFFQRLNMNDREVVALMGAHALGKTH-----------------------LKRSGYEGP 183
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+N NVF N++Y++L+N +L +D L
Sbjct: 184 FGAAN----------NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 233
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 234 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 262
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 97/266 (36%), Gaps = 62/266 (23%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRAGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSD 235
+ F+ N RE VAL G H +G KT N P
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGPWGA 193
Query: 236 SNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTDKR 276
+NN F N++Y++L+N +L +D L D +
Sbjct: 194 ANN----------CFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK 243
Query: 277 TRSIVTSFAVDQSLFFQEFANSMIKM 302
SIV +A DQ FF++F+ + K+
Sbjct: 244 YLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 99/269 (36%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 43 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 96
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 97 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 153
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G H +G KT N P
Sbjct: 154 AGYVRTFFQRLNMNDREVVALMGAHALG--------------------KTHLKNSGYEGP 193
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L + L
Sbjct: 194 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTAYSLIQ 243
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 244 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 272
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
With Phosphate Bound, Ph 6, 100k
Length = 292
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 100/268 (37%), Gaps = 66/268 (24%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST---SEQNARPNLSLRKEALKFVDDLR 115
IG L+R+ +H + G D + G T +Q P+ + + KF++
Sbjct: 38 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKQFNDPSNAGLQNGFKFLE--- 91
Query: 116 ARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNT 173
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 92 -PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDA 149
Query: 174 TVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT 233
+ F+ N RE VAL G +G KT N P
Sbjct: 150 GYVRTFFQRLNMNDREVVALMGAGALG--------------------KTHLKNSGYEGPW 189
Query: 234 SDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYTD 274
+NN VF N++Y++L+N +L +D L D
Sbjct: 190 GAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQD 239
Query: 275 KRTRSIVTSFAVDQSLFFQEFANSMIKM 302
+ SIV +A DQ FF++F+ + K+
Sbjct: 240 PKYLSIVKEYANDQDKFFKDFSKAFEKL 267
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
pdb|1CCG|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 99/269 (36%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 37 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 90
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 91 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 147
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G +G KT N P
Sbjct: 148 AGYVRTFFQRLNMNDREVVALMGAGALG--------------------KTHLKNSGYEGP 187
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 188 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 237
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 238 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
Ph 6, 100k
pdb|1DSG|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 5, Room Temperature.
pdb|1DSO|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 6, Room Temperature.
pdb|1DSP|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 7, Room Temperature
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 99/269 (36%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQGC----DGSVLLEGST----SEQNARPNLSLRKEALKFVDDL 114
IG L+R+ +H + G D + G T E N N L+ KF++
Sbjct: 38 IGYGPVLVRLAWH---ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE-- 91
Query: 115 RARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSN 172
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 92 --PIHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD 148
Query: 173 TTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP 232
+ F+ N RE VAL G +G KT N P
Sbjct: 149 AGYVRTFFQRLNMNDREVVALMGAGALG--------------------KTHLKNSGYEGP 188
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+NN VF N++Y++L+N +L +D L
Sbjct: 189 WGAANN----------VFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQ 238
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 239 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 267
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 99/269 (36%), Gaps = 68/269 (25%)
Query: 63 IGLAAGLIRIHFHDCFVQG-CDGSVLLEGST----SEQNARPNLSLRKEALKFVDDLRAR 117
IG L+R+ +H D + G T E N N L+ KF++
Sbjct: 40 IGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQN-GFKFLE----P 94
Query: 118 VHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN--LPSPFSNTTV 175
+HKE +S D+ +L +V GP GR D+ T N LP +
Sbjct: 95 IHKEF-PWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADY 153
Query: 176 ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKT---CP 232
+ F+ N RE VAL G H +G H LK++ P
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHALGKTH-----------------------LKRSGYEGP 190
Query: 233 TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQG-------------------LLTSDQDLYT 273
+N NVF N++Y++L+N +L + L
Sbjct: 191 WGAAN----------NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTXYSLIQ 240
Query: 274 DKRTRSIVTSFAVDQSLFFQEFANSMIKM 302
D + SIV +A DQ FF++F+ + K+
Sbjct: 241 DPKYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q,
D179n
Length = 357
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 111/290 (38%), Gaps = 58/290 (20%)
Query: 45 PKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFV----------QGCDGSVLLEGSTSE 94
P + + QN +D A +IR+ FHD G DGS+LL +
Sbjct: 19 PLAQDLQETIFQNECGQD---AHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTV-- 73
Query: 95 QNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALS---GGPNYDLP 151
PN S V++L + K +S AD++ A +VALS G P +
Sbjct: 74 ---EPNFSANNGIDDSVNNLIPFMQKH--NTISAADLVQFAG--AVALSNCPGAPRLEF- 125
Query: 152 LGRRDSKTFATVVNL-PSPFSNTTVILNDFREK-TFNARETVALSGGHTVGLAHCPAFTN 209
L R +KT A V L P P + T IL F + F E V+L H+V A+
Sbjct: 126 LAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARAN------ 179
Query: 210 RLYPKQDPTLDK--------TFANN------LKKTCPTSDSNNTTVFDIRSPNVFDNKYY 255
K D T+D TF LK +NNT ++ SP +
Sbjct: 180 ----KVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTG--EVASPLPLGSGSD 233
Query: 256 VDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQL 305
M Q SD L D RT I F +Q+ F +M K++ L
Sbjct: 234 TGEMRLQ----SDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVL 279
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n
Length = 357
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 111/290 (38%), Gaps = 58/290 (20%)
Query: 45 PKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFV----------QGCDGSVLLEGSTSE 94
P + + QN +D A +IR+ FHD G DGS+LL +
Sbjct: 19 PLAQDLQETIFQNECGED---AHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTV-- 73
Query: 95 QNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALS---GGPNYDLP 151
PN S V++L + K +S AD++ A +VALS G P +
Sbjct: 74 ---EPNFSANNGIDDSVNNLIPFMQKH--NTISAADLVQFAG--AVALSNCPGAPRLEF- 125
Query: 152 LGRRDSKTFATVVNL-PSPFSNTTVILNDFREK-TFNARETVALSGGHTVGLAHCPAFTN 209
L R +KT A V L P P + T IL F + F E V+L H+V A+
Sbjct: 126 LAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARAN------ 179
Query: 210 RLYPKQDPTLDK--------TFANN------LKKTCPTSDSNNTTVFDIRSPNVFDNKYY 255
K D T+D TF LK +NNT ++ SP +
Sbjct: 180 ----KVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTG--EVASPLPLGSGSD 233
Query: 256 VDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQL 305
M Q SD L D RT I F +Q+ F +M K++ L
Sbjct: 234 TGEMRLQ----SDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVL 279
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase
pdb|1YYG|A Chain A, Manganese Peroxidase Complexed With Cd(Ii) Inhibitor
pdb|1YZP|A Chain A, Substrate-free Manganese Peroxidase
pdb|1YZR|A Chain A, Manganese Peroxidase-Sm(Iii) Complex
pdb|1MNP|A Chain A, Manganese Peroxidase
pdb|3M5Q|A Chain A, 0.93 A Structure Of Manganese-Bound Manganese Peroxidase
pdb|3M8M|A Chain A, 1.05 A Structure Of Manganese-Free Manganese Peroxidase
Length = 357
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 110/290 (37%), Gaps = 58/290 (20%)
Query: 45 PKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFV----------QGCDGSVLLEGSTSE 94
P + + QN +D A +IR+ FHD G DGS+LL +
Sbjct: 19 PLAQDLQETIFQNECGED---AHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPTV-- 73
Query: 95 QNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALS---GGPNYDLP 151
PN S V++L + K +S AD++ A +VALS G P +
Sbjct: 74 ---EPNFSANNGIDDSVNNLIPFMQKH--NTISAADLVQFAG--AVALSNCPGAPRLEF- 125
Query: 152 LGRRDSKTFATVVNL-PSPFSNTTVILNDFREK-TFNARETVALSGGHTVGLAHCPAFTN 209
L R +KT A V L P P + T IL F + F E V+L H+V A
Sbjct: 126 LAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARAD------ 179
Query: 210 RLYPKQDPTLDK--------TFANN------LKKTCPTSDSNNTTVFDIRSPNVFDNKYY 255
K D T+D TF LK +NNT ++ SP +
Sbjct: 180 ----KVDQTIDAAPFDSTPFTFDTQVFLEVLLKGVGFPGSANNTG--EVASPLPLGSGSD 233
Query: 256 VDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQL 305
M Q SD L D RT I F +Q+ F +M K++ L
Sbjct: 234 TGEMRLQ----SDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVL 279
>pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan
Environment In Pleurotus Eryngii Versatile Peroxidase
Length = 317
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 94/265 (35%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
SF +Q FA +M KM+ L
Sbjct: 245 QSFVNNQPKIQNRFAATMSKMALLG 269
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 94/264 (35%), Gaps = 65/264 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V+L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVSLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQL 305
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALL 268
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 317
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 93/265 (35%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPGPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
pdb|3FJW|B Chain B, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 93/265 (35%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 93/265 (35%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAA----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile
Peroxidase (Vp)
Length = 316
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 93/265 (35%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVYLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase
Length = 331
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 93/264 (35%), Gaps = 65/264 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQL 305
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALL 268
>pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 93/264 (35%), Gaps = 65/264 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQL 305
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALL 268
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 93/265 (35%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPGPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 93/264 (35%), Gaps = 65/264 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPQVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQL 305
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALL 268
>pdb|1LY8|A Chain A, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
pdb|1LY8|B Chain B, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
Length = 343
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 98/295 (33%), Gaps = 68/295 (23%)
Query: 35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSE 94
L FY S K ES VRK ++ A IG + L G+
Sbjct: 32 LQTNFYQGS--KCESPVRKSLRIAFHDAIGFSPALTAAG-----------QFGGGGADGS 78
Query: 95 QNARPNLSLRKEA-LKFVDDLRARVHKECGRVVSCADILALAARDSVALS---GGPNYDL 150
A N+ L A D + A VS D++ AA +V +S G P +
Sbjct: 79 IIAHSNIELAFPANGGLTDTVEALRAVGINHGVSFGDLIQFAA--AVGMSNCPGSPRLEF 136
Query: 151 PLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNR 210
GR +S + +P P + T IL+ F + F+ E V L H++
Sbjct: 137 LTGRSNSSQPSPPSLIPGPGNTVTAILDRFGDAGFSPDEVVDLLAAHSLA---------- 186
Query: 211 LYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGL------ 264
Q+ F + L T P VFD ++Y++ + +
Sbjct: 187 ---SQEGLNSAIFRSPLDST----------------PQVFDTQFYIETLLKGTTQPGPSL 227
Query: 265 --------------LTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQL 305
+ SD L D RT S + Q F +M KMS L
Sbjct: 228 GFAEELSPFPGGFRIRSDALLARDSRTACRWQSMTSSNEVMGQRFRAAMAKMSVL 282
>pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 319
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 92/265 (34%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPGPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------GVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|4FCS|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 92/265 (34%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P PF + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------GVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 129 ADILALAARDSVALSGGPNYDLPLGRRDSKTFATV------VNL------PSPFSNTTVI 176
AD+ + + + LSGGPN R+ A V VN P P + I
Sbjct: 198 ADVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDI 257
Query: 177 LNDFREKTFNARETVAL-SGGHTVGLAH 203
+ F N ETVAL +GGHT G H
Sbjct: 258 RDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 129 ADILALAARDSVALSGGPNYDLPLGRRDSKTFATV------VNL------PSPFSNTTVI 176
AD+ + + + LSGGPN R+ A V VN P P + I
Sbjct: 198 ADVYWGSEKIWLELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDI 257
Query: 177 LNDFREKTFNARETVAL-SGGHTVGLAH 203
+ F N ETVAL +GGHT G H
Sbjct: 258 RDTFARMAMNDEETVALIAGGHTFGKTH 285
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5
pdb|2FXJ|B Chain B, Crystal Structure Of Katg At Ph 8.5
pdb|3N3O|A Chain A, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
pdb|3N3O|B Chain B, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
Length = 748
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 142 LSGGPNYDLPLGRRDSKTFATV------VNL------PSPFSNTTVILNDFREKTFNARE 189
LSGGPN R+ A V VN P P + I + F N E
Sbjct: 211 LSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEE 270
Query: 190 TVAL-SGGHTVGLAH 203
TVAL +GGHT G H
Sbjct: 271 TVALIAGGHTFGKTH 285
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|1MWV|B Chain B, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|2B2O|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2O|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2Q|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2Q|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2R|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2R|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2S|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
pdb|2B2S|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
Length = 714
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 142 LSGGPNYDLPLGRRDSKTFATV------VNL------PSPFSNTTVILNDFREKTFNARE 189
LSGGPN R+ A V VN P P + I + F N E
Sbjct: 177 LSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEE 236
Query: 190 TVAL-SGGHTVGLAH 203
TVAL +GGHT G H
Sbjct: 237 TVALIAGGHTFGKTH 251
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
pdb|2DV2|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
Length = 748
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 142 LSGGPNYDLPLGRRDSKTFATV------VNL------PSPFSNTTVILNDFREKTFNARE 189
LSGGPN R+ A V VN P P + I + F N E
Sbjct: 211 LSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEE 270
Query: 190 TVAL-SGGHTVGLAH 203
TVAL +GGHT G H
Sbjct: 271 TVALIAGGHTFGKTH 285
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
pdb|1X7U|B Chain B, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
Length = 748
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 142 LSGGPNYDLPLGRRDSKTFATV------VNL------PSPFSNTTVILNDFREKTFNARE 189
LSGGPN R+ A V VN P P + I + F N E
Sbjct: 211 LSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEE 270
Query: 190 TVAL-SGGHTVGLAH 203
TVAL +GGHT G H
Sbjct: 271 TVALIAGGHTFGKTH 285
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5
pdb|2FXG|B Chain B, Crystal Structure Of Katg At Ph 4.5
pdb|2FXH|A Chain A, Crystal Structure Of Katg At Ph 6.5
pdb|2FXH|B Chain B, Crystal Structure Of Katg At Ph 6.5
pdb|3N3N|A Chain A, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3N|B Chain B, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3P|A Chain A, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
pdb|3N3P|B Chain B, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
Length = 748
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 142 LSGGPNYDLPLGRRDSKTFATV------VNL------PSPFSNTTVILNDFREKTFNARE 189
LSGGPN R+ A V VN P P + I + F N E
Sbjct: 211 LSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEE 270
Query: 190 TVAL-SGGHTVGLAH 203
TVAL +GGHT G H
Sbjct: 271 TVALIAGGHTFGKTH 285
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
pdb|3N3Q|B Chain B, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
Length = 748
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 142 LSGGPNYDLPLGRRDSKTFATV------VNL------PSPFSNTTVILNDFREKTFNARE 189
LSGGPN R+ A V VN P P + I + F N E
Sbjct: 211 LSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEE 270
Query: 190 TVAL-SGGHTVGLAH 203
TVAL +GGHT G H
Sbjct: 271 TVALIAGGHTFGKTH 285
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg
pdb|2DV1|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg
Length = 748
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 142 LSGGPNYDLPLGRRDSKTFATV------VNL------PSPFSNTTVILNDFREKTFNARE 189
LSGGPN R+ A V VN P P + I + F N E
Sbjct: 211 LSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEE 270
Query: 190 TVAL-SGGHTVGLAH 203
TVAL +GGHT G H
Sbjct: 271 TVALIAGGHTFGKTH 285
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 92/265 (34%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P P + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEPQDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|2CCD|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCD|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 6/106 (5%)
Query: 167 PSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P P + I FR N ET AL GGHT G H + + P+ + +
Sbjct: 239 PDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGL 298
Query: 226 NLKKTCPTSDSNNTTVFDIR-----SPNVFDNKYYVDLMNRQGLLT 266
K + T + I +P +DN + L + LT
Sbjct: 299 GWKSSYGTGTGKDAITTGIEVVWTNTPTKWDNSFLEILYGYEWELT 344
>pdb|1SJ2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
pdb|1SJ2|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
Length = 743
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 6/106 (5%)
Query: 167 PSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P P + I FR N ET AL GGHT G H + + P+ + +
Sbjct: 242 PDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGL 301
Query: 226 NLKKTCPTSDSNNTTVFDIR-----SPNVFDNKYYVDLMNRQGLLT 266
K + T + I +P +DN + L + LT
Sbjct: 302 GWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFLEILYGYEWELT 347
>pdb|2CCA|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCA|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 6/106 (5%)
Query: 167 PSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLYPKQDPTLDKTFAN 225
P P + I FR N ET AL GGHT G H + + P+ + +
Sbjct: 239 PDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLVGPEPEAAPLEQMGL 298
Query: 226 NLKKTCPTSDSNNTTVFDIR-----SPNVFDNKYYVDLMNRQGLLT 266
K + T + I +P +DN + L + LT
Sbjct: 299 GWKSSYGTGTGKDAITSGIEVVWTNTPTKWDNSFLEILYGYEWELT 344
>pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 92/265 (34%), Gaps = 65/265 (24%)
Query: 70 IRIHFHDCFV-------QGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKEC 122
+R+ FHD G DGS++ T E N N + + V + V K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAF-DTIETNFPANAGIDE----IVSAQKPFVAK-- 94
Query: 123 GRVVSCADILALAARDSVA-LSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFR 181
+S D + A V+ GG LGR D+ + +P F + IL
Sbjct: 95 -HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHLVPEGFDSVDSILARMG 153
Query: 182 EKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTV 241
+ F+ E V L H++ A K DP++ T
Sbjct: 154 DAGFSPVEVVWLLASHSIAAAD----------KVDPSIPG------------------TP 185
Query: 242 FDIRSPNVFDNKYYVDLMNRQGL--------------------LTSDQDLYTDKRTRSIV 281
FD +P VFD++++++ + L L SD L D +T
Sbjct: 186 FD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEW 244
Query: 282 TSFAVDQSLFFQEFANSMIKMSQLS 306
S +Q FA +M KM+ L
Sbjct: 245 QSMVNNQPKIQNRFAATMSKMALLG 269
>pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From
Synechococcus Pcc 7942
Length = 720
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 167 PSPFSNTTVILNDFREKTFNARETVALS-GGHTVGLAH 203
P P + F N ETVAL+ GGHTVG H
Sbjct: 231 PDPLKTAHDVRVTFARMAMNDEETVALTAGGHTVGKCH 268
>pdb|3VLM|A Chain A, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLM|B Chain B, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
Length = 737
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 167 PSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAH 203
P P ++ I F N +ET AL +GGHT G H
Sbjct: 228 PDPEASAKNIRQTFDRAAMNDKETAALIAGGHTFGKVH 265
>pdb|3VLK|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLK|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLL|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
pdb|3VLL|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
Length = 737
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 167 PSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAH 203
P P ++ I F N +ET AL +GGHT G H
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|1ITK|A Chain A, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
pdb|1ITK|B Chain B, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
Length = 731
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 167 PSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAH 203
P P ++ I F N +ET AL +GGHT G H
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|3VLH|A Chain A, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLH|B Chain B, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLI|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLI|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLJ|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
pdb|3VLJ|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
Length = 737
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 167 PSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAH 203
P P ++ I F N +ET AL +GGHT G H
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|3UW8|A Chain A, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
pdb|3UW8|B Chain B, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
Length = 737
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 167 PSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAH 203
P P ++ I F N +ET AL +GGHT G H
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|1CK6|A Chain A, Binding Mode Of Salicylhydroxamic Acid To Arthromyces
Ramosus Peroxidase
pdb|1C8I|A Chain A, Binding Mode Of Hydroxylamine To Arthromyces Ramosus
Peroxidase
pdb|1ARP|A Chain A, Crystal Structure Of The Fungal Peroxidase From
Arthromyces Ramosus At 1.9 Angstroms Resolution:
Structural Comparisons With The Lignin And Cytochrome C
Peroxidases
pdb|1ARU|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARV|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARW|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARX|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARY|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1GZA|A Chain A, Peroxidase
pdb|1GZB|A Chain A, Peroxidase
pdb|1HSR|A Chain A, Binding Mode Of Benzhydroxamic Acid To Arthromyces Ramosus
Peroxidase
pdb|2E3B|A Chain A, Crystal Structure Of The Ha-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E3A|A Chain A, Crystal Structure Of The No-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E39|A Chain A, Crystal Structure Of The Cn-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
Length = 344
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 77/229 (33%), Gaps = 54/229 (23%)
Query: 126 VSCADILALAARDSVALS---GGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFRE 182
VS D++ A +V +S G P + GR +S + +P P + T IL+ +
Sbjct: 112 VSFGDLIQFAT--AVGMSNCPGSPRLEFLTGRSNSSQPSPPSLIPGPGNTVTAILDRMGD 169
Query: 183 KTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVF 242
F+ E V L H++ Q+ F + L T
Sbjct: 170 AGFSPDEVVDLLAAHSLA-------------SQEGLNSAIFRSPLDST------------ 204
Query: 243 DIRSPNVFDNKYYVDLMNR--------------------QGLLTSDQDLYTDKRTRSIVT 282
P VFD ++Y++ + + + + SD L D RT
Sbjct: 205 ----PQVFDTQFYIETLLKGTTQPGPSLGFAEELSPFPGEFRMRSDALLARDSRTACRWQ 260
Query: 283 SFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVV 331
S + Q + +M KMS L + SNN A V+
Sbjct: 261 SMTSSNEVMGQRYRAAMAKMSVLGFDRNALTDCSDVIPSAVSNNAAPVI 309
>pdb|1LY9|A Chain A, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LY9|B Chain B, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 69/203 (33%), Gaps = 54/203 (26%)
Query: 126 VSCADILALAARDSVALS---GGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFRE 182
VS D++ A +V +S G P + GR S + +P P + T IL+ +
Sbjct: 111 VSFGDLIQFAT--AVGMSNCPGSPRLEFLTGRSSSSQPSPPSLIPGPGNTVTAILDRMGD 168
Query: 183 KTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVF 242
F+ E V L H++ Q+ F + L T
Sbjct: 169 AGFSPDEVVDLLAAHSLA-------------SQEGLNSAIFRSPLDST------------ 203
Query: 243 DIRSPNVFDNKYYVDLMNR--------------------QGLLTSDQDLYTDKRTRSIVT 282
P VFD ++Y++ + + + + SD L D RT
Sbjct: 204 ----PQVFDTQFYIETLLKGTTQPGPSLGFAEELSPFPGEFRMRSDALLARDSRTACRWQ 259
Query: 283 SFAVDQSLFFQEFANSMIKMSQL 305
S + Q + +M KMS L
Sbjct: 260 SMTSSNEVMGQRYRAAMAKMSVL 282
>pdb|1LYK|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYK|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 70/203 (34%), Gaps = 54/203 (26%)
Query: 126 VSCADILALAARDSVALS---GGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFRE 182
VS D++ A +V +S G P + GR +S + +P P + T IL+ +
Sbjct: 111 VSFGDLIQFAT--AVGMSNCPGSPRLEFLTGRSNSSQPSPPSLIPGPGNTVTAILDRMGD 168
Query: 183 KTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVF 242
F+ E V L H++ Q+ F + L T
Sbjct: 169 AGFSPDEVVDLLAAHSLA-------------SQEGLNSAIFRSPLDST------------ 203
Query: 243 DIRSPNVFDNKYYVDLMNR--------------------QGLLTSDQDLYTDKRTRSIVT 282
P VFD ++Y++ + + + + SD L D RT
Sbjct: 204 ----PQVFDTQFYIETLLKGTTQPGPSLGFAEELSPFPGEFRMRSDALLARDSRTACRWQ 259
Query: 283 SFAVDQSLFFQEFANSMIKMSQL 305
S + Q + +M KMS L
Sbjct: 260 SMTSSNEVMGQRYRAAMAKMSVL 282
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,013,321
Number of Sequences: 62578
Number of extensions: 349662
Number of successful extensions: 1204
Number of sequences better than 100.0: 136
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 838
Number of HSP's gapped (non-prelim): 184
length of query: 343
length of database: 14,973,337
effective HSP length: 100
effective length of query: 243
effective length of database: 8,715,537
effective search space: 2117875491
effective search space used: 2117875491
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)