Query 019279
Match_columns 343
No_of_seqs 197 out of 1284
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 08:10:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019279.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019279hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 2.8E-70 6.1E-75 519.3 31.6 296 26-324 23-346 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 1.8E-67 4E-72 495.9 29.2 287 31-323 1-314 (315)
3 PRK15381 pathogenicity island 100.0 6.6E-58 1.4E-62 437.1 25.4 249 27-322 139-399 (408)
4 cd01847 Triacylglycerol_lipase 100.0 1.6E-57 3.4E-62 421.8 23.0 257 30-323 1-280 (281)
5 cd01846 fatty_acyltransferase_ 100.0 8.7E-54 1.9E-58 394.3 23.7 256 32-322 1-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 7.2E-40 1.6E-44 301.5 18.1 281 26-336 25-342 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 100.0 3.5E-28 7.7E-33 217.1 13.3 146 134-320 81-234 (234)
8 cd01839 SGNH_arylesterase_like 99.5 2.7E-13 5.9E-18 119.9 14.2 120 135-323 79-204 (208)
9 cd01836 FeeA_FeeB_like SGNH_hy 99.5 8.9E-13 1.9E-17 114.8 13.3 121 135-323 67-188 (191)
10 cd01832 SGNH_hydrolase_like_1 99.5 1.9E-12 4.1E-17 112.1 14.9 117 135-322 67-184 (185)
11 cd04501 SGNH_hydrolase_like_4 99.4 7.6E-12 1.6E-16 108.2 15.8 124 135-323 59-182 (183)
12 cd01834 SGNH_hydrolase_like_2 99.4 5.8E-12 1.3E-16 109.1 15.0 129 135-322 61-190 (191)
13 PRK10528 multifunctional acyl- 99.4 3.6E-12 7.8E-17 111.5 12.7 111 135-323 71-182 (191)
14 cd01838 Isoamyl_acetate_hydrol 99.4 4.2E-12 9E-17 110.8 12.9 134 135-323 63-198 (199)
15 cd01830 XynE_like SGNH_hydrola 99.4 6.5E-12 1.4E-16 110.8 13.9 128 136-322 75-202 (204)
16 cd01841 NnaC_like NnaC (CMP-Ne 99.4 6.6E-12 1.4E-16 107.7 12.6 121 135-322 51-172 (174)
17 cd01823 SEST_like SEST_like. A 99.4 2E-11 4.4E-16 111.5 15.8 161 135-322 80-258 (259)
18 cd01824 Phospholipase_B_like P 99.4 2.2E-11 4.8E-16 113.0 16.1 181 85-323 86-282 (288)
19 cd01821 Rhamnogalacturan_acety 99.3 1.5E-11 3.3E-16 107.9 12.8 133 135-323 65-197 (198)
20 cd01844 SGNH_hydrolase_like_6 99.3 4.2E-11 9E-16 103.3 15.2 119 135-323 57-176 (177)
21 cd01827 sialate_O-acetylestera 99.3 2.5E-11 5.4E-16 105.4 13.2 119 135-323 67-186 (188)
22 cd01828 sialate_O-acetylestera 99.3 2.3E-11 5E-16 103.8 12.8 118 135-323 48-167 (169)
23 cd04506 SGNH_hydrolase_YpmR_li 99.3 5.4E-11 1.2E-15 104.7 14.4 134 135-322 68-203 (204)
24 cd01820 PAF_acetylesterase_lik 99.3 2.5E-11 5.4E-16 108.0 11.6 120 135-323 89-209 (214)
25 PF13472 Lipase_GDSL_2: GDSL-l 99.3 4E-11 8.8E-16 101.7 11.3 119 135-316 61-179 (179)
26 cd01835 SGNH_hydrolase_like_3 99.3 8.6E-11 1.9E-15 102.5 12.9 123 135-322 69-191 (193)
27 cd01825 SGNH_hydrolase_peri1 S 99.3 5.4E-11 1.2E-15 103.1 11.4 128 135-323 56-184 (189)
28 cd00229 SGNH_hydrolase SGNH_hy 99.3 1.2E-10 2.5E-15 98.4 13.0 122 134-322 64-186 (187)
29 cd01822 Lysophospholipase_L1_l 99.2 1.7E-10 3.8E-15 98.8 14.2 112 135-323 64-175 (177)
30 cd01833 XynB_like SGNH_hydrola 99.2 1.4E-10 3.1E-15 97.6 12.2 116 135-323 40-156 (157)
31 cd01826 acyloxyacyl_hydrolase_ 99.1 3E-09 6.6E-14 97.6 15.3 149 136-322 123-304 (305)
32 cd01831 Endoglucanase_E_like E 99.0 6.7E-09 1.5E-13 88.7 12.5 111 136-323 56-167 (169)
33 cd04502 SGNH_hydrolase_like_7 99.0 5.2E-09 1.1E-13 89.5 11.8 119 135-322 50-169 (171)
34 KOG3035 Isoamyl acetate-hydrol 99.0 7.4E-09 1.6E-13 89.4 11.1 139 135-323 68-207 (245)
35 cd01829 SGNH_hydrolase_peri2 S 98.9 7.8E-09 1.7E-13 90.5 10.9 139 135-323 59-197 (200)
36 cd01840 SGNH_hydrolase_yrhL_li 98.5 8E-07 1.7E-11 74.5 9.3 100 135-323 50-149 (150)
37 COG2755 TesA Lysophospholipase 98.5 3.6E-06 7.9E-11 74.6 13.4 24 301-324 185-208 (216)
38 PF14606 Lipase_GDSL_3: GDSL-l 98.3 3E-06 6.5E-11 72.5 8.3 166 31-323 2-176 (178)
39 KOG3670 Phospholipase [Lipid t 98.2 2.9E-05 6.3E-10 73.3 12.9 148 28-199 73-241 (397)
40 COG2845 Uncharacterized protei 97.3 0.0048 1E-07 57.0 12.2 135 135-322 177-315 (354)
41 cd01842 SGNH_hydrolase_like_5 96.0 0.19 4.2E-06 42.9 12.1 125 136-322 51-180 (183)
42 PF08885 GSCFA: GSCFA family; 93.6 0.34 7.4E-06 44.1 8.0 140 134-319 100-250 (251)
43 PLN02757 sirohydrochlorine fer 82.6 4 8.7E-05 34.2 6.1 62 177-260 60-124 (154)
44 cd03416 CbiX_SirB_N Sirohydroc 76.1 6.8 0.00015 29.9 5.1 52 178-251 47-98 (101)
45 PF02633 Creatininase: Creatin 71.6 18 0.0004 32.4 7.6 84 140-259 61-144 (237)
46 COG3240 Phospholipase/lecithin 68.6 5.9 0.00013 37.8 3.7 70 134-209 97-166 (370)
47 PF01903 CbiX: CbiX; InterPro 67.8 4.8 0.0001 30.9 2.6 53 179-253 41-93 (105)
48 cd00384 ALAD_PBGS Porphobilino 67.2 22 0.00047 33.3 7.0 61 171-247 47-107 (314)
49 PF13839 PC-Esterase: GDSL/SGN 67.2 56 0.0012 29.1 9.9 149 135-322 100-259 (263)
50 PRK13384 delta-aminolevulinic 63.2 27 0.00059 32.7 6.8 61 171-247 57-117 (322)
51 PRK09283 delta-aminolevulinic 63.0 27 0.00058 32.9 6.8 61 171-247 55-115 (323)
52 PF00490 ALAD: Delta-aminolevu 59.1 29 0.00062 32.6 6.3 61 173-247 55-115 (324)
53 cd03414 CbiX_SirB_C Sirohydroc 57.1 42 0.0009 26.2 6.3 50 177-250 47-96 (117)
54 cd04824 eu_ALAD_PBGS_cysteine_ 56.3 15 0.00032 34.4 3.8 61 171-246 47-109 (320)
55 cd04823 ALAD_PBGS_aspartate_ri 56.2 47 0.001 31.2 7.1 62 171-247 50-112 (320)
56 cd03412 CbiK_N Anaerobic cobal 55.3 43 0.00093 26.9 6.1 51 175-250 56-106 (127)
57 KOG2794 Delta-aminolevulinic a 50.2 27 0.00058 32.0 4.4 94 134-252 38-131 (340)
58 PF06908 DUF1273: Protein of u 49.3 35 0.00075 29.3 4.9 56 168-250 22-77 (177)
59 PF04914 DltD_C: DltD C-termin 46.4 45 0.00097 27.1 4.9 73 231-322 38-125 (130)
60 COG0113 HemB Delta-aminolevuli 46.0 33 0.00071 32.0 4.4 61 171-245 57-117 (330)
61 PRK13660 hypothetical protein; 43.4 94 0.002 26.8 6.6 55 170-251 24-78 (182)
62 PF08331 DUF1730: Domain of un 41.8 70 0.0015 23.2 4.9 65 187-251 9-77 (78)
63 PF08029 HisG_C: HisG, C-termi 39.5 25 0.00054 25.6 2.1 21 177-197 52-72 (75)
64 COG4474 Uncharacterized protei 37.5 2.4E+02 0.0051 24.1 7.8 56 170-252 24-79 (180)
65 TIGR03455 HisG_C-term ATP phos 37.0 44 0.00096 25.8 3.3 23 175-197 74-96 (100)
66 cd00419 Ferrochelatase_C Ferro 33.3 1.5E+02 0.0033 24.0 6.2 38 177-227 79-116 (135)
67 PRK00923 sirohydrochlorin coba 32.9 58 0.0013 25.8 3.6 19 177-195 48-66 (126)
68 PRK07807 inosine 5-monophospha 30.2 77 0.0017 31.8 4.6 61 174-261 225-287 (479)
69 PF02896 PEP-utilizers_C: PEP- 30.0 80 0.0017 29.4 4.4 17 136-152 196-212 (293)
70 TIGR01091 upp uracil phosphori 28.6 1.6E+02 0.0035 25.7 5.9 50 174-254 135-184 (207)
71 COG1903 CbiD Cobalamin biosynt 27.9 5.2E+02 0.011 24.9 9.4 89 88-198 167-257 (367)
72 PF11691 DUF3288: Protein of u 27.8 35 0.00075 25.8 1.3 36 304-342 2-37 (90)
73 PRK13717 conjugal transfer pro 27.4 1.2E+02 0.0026 24.5 4.3 26 217-242 70-95 (128)
74 COG4531 ZnuA ABC-type Zn2+ tra 26.4 1.8E+02 0.004 26.9 5.8 49 217-271 179-231 (318)
75 PRK09121 5-methyltetrahydropte 24.8 2.4E+02 0.0052 26.8 6.8 56 165-233 146-201 (339)
76 COG0276 HemH Protoheme ferro-l 24.3 2.4E+02 0.0052 26.7 6.4 22 178-199 105-126 (320)
77 COG3581 Uncharacterized protei 24.3 98 0.0021 30.1 3.9 46 184-253 328-373 (420)
78 PRK00129 upp uracil phosphorib 24.1 2.2E+02 0.0047 24.9 5.9 48 175-253 138-185 (209)
79 cd03411 Ferrochelatase_N Ferro 23.4 91 0.002 26.0 3.2 23 177-199 101-123 (159)
80 PRK03601 transcriptional regul 23.2 4.8E+02 0.01 23.3 8.3 76 168-268 66-143 (275)
81 KOG4079 Putative mitochondrial 23.0 39 0.00085 27.6 0.8 21 186-206 42-63 (169)
82 COG4053 Uncharacterized protei 22.3 5.3E+02 0.011 22.5 7.6 27 172-198 23-49 (244)
83 TIGR02171 Fb_sc_TIGR02171 Fibr 21.8 4.1E+02 0.0089 28.9 8.2 77 167-255 800-876 (912)
84 cd04236 AAK_NAGS-Urea AAK_NAGS 21.4 3.4E+02 0.0074 25.0 6.8 76 135-238 34-110 (271)
85 PF08282 Hydrolase_3: haloacid 21.1 40 0.00087 29.4 0.6 17 29-45 201-217 (254)
86 PF04311 DUF459: Protein of un 21.0 82 0.0018 29.9 2.7 15 136-150 102-116 (327)
87 PRK03669 mannosyl-3-phosphogly 20.9 50 0.0011 30.0 1.3 17 29-45 205-221 (271)
88 cd03413 CbiK_C Anaerobic cobal 20.6 1.1E+02 0.0024 23.5 3.0 18 178-195 45-62 (103)
89 cd03409 Chelatase_Class_II Cla 20.4 1.4E+02 0.0031 22.1 3.5 23 178-200 48-70 (101)
90 PF06812 ImpA-rel_N: ImpA-rela 20.4 36 0.00078 23.6 0.1 9 301-309 52-60 (62)
91 TIGR02744 TrbI_Ftype type-F co 20.3 2E+02 0.0044 22.7 4.3 27 217-243 57-83 (112)
92 COG0648 Nfo Endonuclease IV [D 20.0 4.5E+02 0.0098 24.3 7.3 54 167-232 79-132 (280)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=2.8e-70 Score=519.35 Aligned_cols=296 Identities=37% Similarity=0.722 Sum_probs=256.5
Q ss_pred cccCCCEEEEcCCcccccCCCCCcccccCCCCCCCCCCCCCCCCcccCCCCCchhhhhh---------------------
Q 019279 26 AAEAARAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFIT--------------------- 84 (343)
Q Consensus 26 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~P~g~~~~~~~~~GrfsnG~~~~d~la--------------------- 84 (343)
..+.+++|||||||++|+||++++.+..+++.+|||++||+++|+||||||++|+||||
T Consensus 23 ~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~ 102 (351)
T PLN03156 23 TCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISD 102 (351)
T ss_pred ccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchh
Confidence 35679999999999999999987766667788999999987789999999999999999
Q ss_pred -----hhhhcCccccCCCCCCcccccCHHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhhcCccCc
Q 019279 85 -----NFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSA 159 (343)
Q Consensus 85 -----NyA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~ 159 (343)
|||+||+++++.+.. ....++|..||++|.++++++....|.+.+++..+++||+||||+|||...|+.. ..
T Consensus 103 ~~~GvNFA~agag~~~~~~~-~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~--~~ 179 (351)
T PLN03156 103 FATGVCFASAGTGYDNATSD-VLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTF--PG 179 (351)
T ss_pred hcccceeecCCccccCCCcc-ccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhcc--cc
Confidence 899999998665432 1235689999999999988887766765556677999999999999998655321 11
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccC-CCCCchHHHHHHHHHHHHHHHHHHHHH
Q 019279 160 RSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRG-RNGQCAADLQRAADLYNPQLVQLVKDL 238 (343)
Q Consensus 160 ~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~-~~~~~~~~~~~~~~~~N~~L~~~l~~l 238 (343)
+....+.+++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.... ...+|.+.+|.+++.||++|++++++|
T Consensus 180 ~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L 259 (351)
T PLN03156 180 RRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKL 259 (351)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 2223356789999999999999999999999999999999999999765421 246899999999999999999999999
Q ss_pred HhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCC-CCCCCCCCceEeCCCChhHHHHHHHH
Q 019279 239 NSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPAS-NLCPNRAVYAFWDPFHPSERANGFIV 317 (343)
Q Consensus 239 ~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~-~~C~~p~~ylfwD~vHPT~~~h~~iA 317 (343)
++++|+++|+++|+|+++.++++||++|||++++++||+.|.++....|++.. ..|+||++|+|||++|||+++|+++|
T Consensus 260 ~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA 339 (351)
T PLN03156 260 NKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIA 339 (351)
T ss_pred HHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999988888778899765 57999999999999999999999999
Q ss_pred HHHHcCC
Q 019279 318 QEFMTGS 324 (343)
Q Consensus 318 ~~~~~~~ 324 (343)
+.++++.
T Consensus 340 ~~~~~~l 346 (351)
T PLN03156 340 NHVVKTL 346 (351)
T ss_pred HHHHHHH
Confidence 9999863
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=1.8e-67 Score=495.93 Aligned_cols=287 Identities=46% Similarity=0.897 Sum_probs=251.1
Q ss_pred CEEEEcCCcccccCCCCCcccccCCCCCCCCCCCCCCCCcccCCCCCchhhhhh-------------------------h
Q 019279 31 RAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFIT-------------------------N 85 (343)
Q Consensus 31 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~P~g~~~~~~~~~GrfsnG~~~~d~la-------------------------N 85 (343)
++||+||||++|+||+.++.+..++..+|||++||+ +|+||||||++|+|||+ |
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~-~p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~~~~~~~G~N 79 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPG-RPTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNGSSDFLTGVN 79 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCC-CCCccccCCchhhhhhhhhccCCCCCCCccCccccchhhccce
Confidence 479999999999999877665444678999999985 79999999999999998 9
Q ss_pred hhhcCccccCCCCCCcccccCHHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhhcCccCccCCCCC
Q 019279 86 FASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFS 165 (343)
Q Consensus 86 yA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~ 165 (343)
||+|||++.+.... ....++|..||++|++++++++...|++++.+..+++||+||||+|||+..+... .....+
T Consensus 80 fA~gGA~~~~~~~~-~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~----~~~~~~ 154 (315)
T cd01837 80 FASGGAGILDSTGF-LGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFAN----PTRQYE 154 (315)
T ss_pred ecccCCccccCCcc-eeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhcC----ccccCC
Confidence 99999999876543 2246799999999999998887777776666778999999999999998755321 110235
Q ss_pred hhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccC-CCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019279 166 LPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRG-RNGQCAADLQRAADLYNPQLVQLVKDLNSQYGS 244 (343)
Q Consensus 166 ~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~-~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~ 244 (343)
..++++.+++++.++|++|+++|||||+|+|+||+||+|.++.... +..+|.+.++++++.||++|++++++|++++|+
T Consensus 155 ~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~ 234 (315)
T cd01837 155 VEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPG 234 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6789999999999999999999999999999999999999876542 346899999999999999999999999999999
Q ss_pred ceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCC-CCCCCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 245 EIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPA-SNLCPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 245 ~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~-~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
++|+++|+|.+++++++||++|||+++.++||+.+.++....|+.. ...|++|++|+|||++|||+++|++||+.++.+
T Consensus 235 ~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g~~~~~~~c~~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g 314 (315)
T cd01837 235 AKFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSG 314 (315)
T ss_pred cEEEEEehhHHHHHHHhChhhcCCcCCCcCccCCCCCCcccccCCCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999998876666678754 568999999999999999999999999999876
No 3
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=6.6e-58 Score=437.13 Aligned_cols=249 Identities=22% Similarity=0.337 Sum_probs=213.1
Q ss_pred ccCCCEEEEcCCcccccCCCCCcccccCCCCCCCCCCCCCCCCcccCCCCCchhhhhh----------hhhhcCccccCC
Q 019279 27 AEAARAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFIT----------NFASAGIGILND 96 (343)
Q Consensus 27 ~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~P~g~~~~~~~~~GrfsnG~~~~d~la----------NyA~gGA~~~~~ 96 (343)
...+++||+||||++|+||+.+..+. ...||||.+| +||||||++|+|||| |||+|||+++..
T Consensus 139 ~~~~~ai~vFGDSlsDtGnn~y~~t~--~~~PPyG~~f-----tGRFSNG~v~~DfLA~~pyl~~~G~NFA~GGA~~~t~ 211 (408)
T PRK15381 139 LGDITRLVFFGDSLSDSLGRMFEKTH--HILPSYGQYF-----GGRFTNGFTWTEFLSSPHFLGKEMLNFAEGGSTSASY 211 (408)
T ss_pred cCCCCeEEEeCCccccCCCccccccc--cCCCCCCCCC-----CcccCCCchhhheeccccccCCCCceEeecccccccc
Confidence 36799999999999999887665443 3579999866 799999999999998 999999998732
Q ss_pred CCCC-c-ccccCHHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHH
Q 019279 97 TGIQ-F-VNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVI 174 (343)
Q Consensus 97 ~~~~-~-~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v 174 (343)
.... . ...++|.+||++|+. .+++||+||+|+|||. .+ ..++++.++
T Consensus 212 ~~~~~~~~~~~~L~~Qv~~~~~-----------------~~~aL~lV~iG~NDy~-~~-------------~~~~v~~vV 260 (408)
T PRK15381 212 SCFNCIGDFVSNTDRQVASYTP-----------------SHQDLAIFLLGANDYM-TL-------------HKDNVIMVV 260 (408)
T ss_pred cccccccCccCCHHHHHHHHHh-----------------cCCcEEEEEeccchHH-Hh-------------HHHHHHHHH
Confidence 1110 0 123689999998653 1589999999999997 33 134678899
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchH
Q 019279 175 SEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGK 254 (343)
Q Consensus 175 ~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~ 254 (343)
+++.++|++||++|||||+|+|+||+||+|..+.. ...+.++.+++.||++|+++|++|++++|+++|+++|+|+
T Consensus 261 ~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~-----~~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~ 335 (408)
T PRK15381 261 EQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS-----DEKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETAD 335 (408)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc-----CchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHH
Confidence 99999999999999999999999999999998743 1357899999999999999999999999999999999999
Q ss_pred HHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCCCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 255 MQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 255 ~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
++.++++||++|||+++.. ||+.|..+....|.+...+|+ +|+|||.+|||+++|+++|+++..
T Consensus 336 ~~~~ii~nP~~yGF~~~~~-cCg~G~~~~~~~C~p~~~~C~---~YvFWD~vHPTe~ah~iiA~~~~~ 399 (408)
T PRK15381 336 AFKVIMEAASNIGYDTENP-YTHHGYVHVPGAKDPQLDICP---QYVFNDLVHPTQEVHHCFAIMLES 399 (408)
T ss_pred HHHHHHhCHHhcCCCcccc-ccCCCccCCccccCcccCCCC---ceEecCCCCChHHHHHHHHHHHHH
Confidence 9999999999999999876 999886665667888778895 999999999999999999999865
No 4
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=1.6e-57 Score=421.82 Aligned_cols=257 Identities=21% Similarity=0.273 Sum_probs=210.2
Q ss_pred CCEEEEcCCcccccCCCCCcccccCCCCCCCCCCCCCCCCcccCCCCCchhhhhh--------------------hhhhc
Q 019279 30 ARAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFIT--------------------NFASA 89 (343)
Q Consensus 30 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~P~g~~~~~~~~~GrfsnG~~~~d~la--------------------NyA~g 89 (343)
|++|||||||++|+||++++. ++ ++|+||||||++++|+++ |||+|
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~--------~~------~~~~gRFsnG~~~~d~~~~~~~~~~~~~~~~~~~~~G~NfA~g 66 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG--------VG------AAGGGRFTVNDGSIWSLGVAEGYGLTTGTATPTTPGGTNYAQG 66 (281)
T ss_pred CCceEEecCcccccCCCCccc--------cC------CCCCcceecCCcchHHHHHHHHcCCCcCcCcccCCCCceeecc
Confidence 578999999999999986542 11 257999999987777665 99999
Q ss_pred CccccCCCCCC--cccccCHHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhhcCccCccCCCCChh
Q 019279 90 GIGILNDTGIQ--FVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLP 167 (343)
Q Consensus 90 GA~~~~~~~~~--~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~ 167 (343)
||++.+..... ....++|.+||++|++.+. ...+++||+||||+|||...+.... ..........
T Consensus 67 Ga~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~------------~~~~~sL~~i~iG~ND~~~~~~~~~-~~~~~~~~~~ 133 (281)
T cd01847 67 GARVGDTNNGNGAGAVLPSVTTQIANYLAAGG------------GFDPNALYTVWIGGNDLIAALAALT-TATTTQAAAV 133 (281)
T ss_pred CccccCCCCccccccCCCCHHHHHHHHHHhcC------------CCCCCeEEEEecChhHHHHHHhhcc-ccccchhhHH
Confidence 99988754321 0235789999999987542 2358999999999999997553211 0111123356
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 019279 168 DYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIF 247 (343)
Q Consensus 168 ~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 247 (343)
++++.+++++..+|++|+++|||+|+|+++||+||+|.+.... ..|.+.++++++.||++|++++++|+.+ +|
T Consensus 134 ~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~---~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i 206 (281)
T cd01847 134 AAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP---AAAAALASALSQTYNQTLQSGLNQLGAN----NI 206 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc---chhHHHHHHHHHHHHHHHHHHHHhccCC----eE
Confidence 8899999999999999999999999999999999999987653 3688899999999999999999998754 89
Q ss_pred EEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCC-CCCCCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 248 VAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPA-SNLCPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 248 ~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~-~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
+++|+|.+++++++||++|||+++.++||+.+... .|+.. ...|++|++|+|||++|||+++|++||+++++.
T Consensus 207 ~~~D~~~~~~~i~~nP~~yGf~~~~~~CC~~~~~~---~~~~~~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~~ 280 (281)
T cd01847 207 IYVDTATLLKEVVANPAAYGFTNTTTPACTSTSAA---GSGAATLVTAAAQSTYLFADDVHPTPAGHKLIAQYALSR 280 (281)
T ss_pred EEEEHHHHHHHHHhChHhcCccCCCccccCCCCcc---ccccccccCCCCccceeeccCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999865322 24422 247999999999999999999999999999874
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=8.7e-54 Score=394.35 Aligned_cols=256 Identities=28% Similarity=0.392 Sum_probs=213.5
Q ss_pred EEEEcCCcccccCCCCCcccccCCCCCCCCCCCCCCCCcccCCCCCchhhhhh------------hhhhcCccccCCCCC
Q 019279 32 AFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFIT------------NFASAGIGILNDTGI 99 (343)
Q Consensus 32 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~P~g~~~~~~~~~GrfsnG~~~~d~la------------NyA~gGA~~~~~~~~ 99 (343)
+||+|||||||+||..++... ..+|.+. .+|.||||||++|+|+|+ |||+|||++......
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~---~~~~~~~----~~~~grfsnG~~w~d~la~~lg~~~~~~~~N~A~~Ga~~~~~~~~ 73 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG---SNPPPSP----PYFGGRFSNGPVWVEYLAATLGLSGLKQGYNYAVGGATAGAYNVP 73 (270)
T ss_pred CeEEeeCccccCCcchhhcCC---CCCCCCC----CCCCCccCCchhHHHHHHHHhCCCccCCcceeEecccccCCcccC
Confidence 589999999999998654321 1233333 347899999999999998 999999998765432
Q ss_pred C-cccccCHHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHH
Q 019279 100 Q-FVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYR 178 (343)
Q Consensus 100 ~-~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~ 178 (343)
. .....++..||++|++.++. +..+++|++||+|+||++..+.. .....+.++.+++++.
T Consensus 74 ~~~~~~~~l~~Qv~~f~~~~~~-----------~~~~~~l~~i~~G~ND~~~~~~~--------~~~~~~~~~~~~~~~~ 134 (270)
T cd01846 74 PYPPTLPGLSDQVAAFLAAHKL-----------RLPPDTLVAIWIGANDLLNALDL--------PQNPDTLVTRAVDNLF 134 (270)
T ss_pred CCCCCCCCHHHHHHHHHHhccC-----------CCCCCcEEEEEeccchhhhhccc--------cccccccHHHHHHHHH
Confidence 1 12356899999999986531 33578999999999999864321 1223467889999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHH
Q 019279 179 KLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYN 258 (343)
Q Consensus 179 ~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 258 (343)
++|++|+++|+|+|+|+++||++|+|.+..... ...+.++.+++.||++|++++++|++++|+++|+++|+|.++.+
T Consensus 135 ~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~---~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 211 (270)
T cd01846 135 QALQRLYAAGARNFLVLNLPDLGLTPAFQAQGD---AVAARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFND 211 (270)
T ss_pred HHHHHHHHCCCCEEEEeCCCCCCCCcccccCCc---ccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHH
Confidence 999999999999999999999999999986542 11268999999999999999999999999999999999999999
Q ss_pred HHhCCcCCCCccccccccCCCCCCCCccCCCCCCCCCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 259 FISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 259 i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
+++||+.|||+++.++||+.+. |.+....|++|++|+|||++|||+++|++||+++++
T Consensus 212 ~~~~p~~yGf~~~~~~C~~~~~------~~~~~~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 212 ILDNPAAYGFTNVTDPCLDYVY------SYSPREACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred HHhCHHhcCCCcCcchhcCCCc------cccccCCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 9999999999999999998532 766667899999999999999999999999999876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=7.2e-40 Score=301.53 Aligned_cols=281 Identities=21% Similarity=0.326 Sum_probs=205.4
Q ss_pred cccCCCEEEEcCCcccccCCCCCcccccCCCCC-CCCCCCCCCCCcccCCC--CCchhhhhh------------------
Q 019279 26 AAEAARAFFVFGDSLVDNGNNNYLATTARADSP-PYGIDYPTRRPTGRFSN--GLNIPDFIT------------------ 84 (343)
Q Consensus 26 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~-P~g~~~~~~~~~Grfsn--G~~~~d~la------------------ 84 (343)
..++|++++||||||||+|+....... ...+ -||. ++..++.+ |.+|++++.
T Consensus 25 ~~~~~~~l~vfGDSlSDsg~~~~~a~~--~~~~~~~~~-----~~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~~ 97 (370)
T COG3240 25 SLAPFQRLVVFGDSLSDSGNYYRPAGH--HGDPGSYGT-----IPGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAAD 97 (370)
T ss_pred cccccceEEEeccchhhcccccCcccc--cCCcccccc-----ccCCcccCCCceeeeccchhhhccccccccccccccC
Confidence 457899999999999999997533211 0111 2222 23444555 444454443
Q ss_pred ------------hhhhcCccccCCC--CCCcccccCHHHHHHHHHHHHHHHHHhhCchhh-hhhccCcEEEEEeccchhh
Q 019279 85 ------------NFASAGIGILNDT--GIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRT-KQLVNGALILITVGGNDFV 149 (343)
Q Consensus 85 ------------NyA~gGA~~~~~~--~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~-~~~~~~sL~~i~iG~ND~~ 149 (343)
|||+|||++...+ ..--....++.+|+.+|+...... .+..+.. .......|+.+|.|+||++
T Consensus 98 ~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~--~v~~~~~~~~l~p~~l~~~~ggand~~ 175 (370)
T COG3240 98 PNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGG--FVWPNYPAQGLDPSALYFLWGGANDYL 175 (370)
T ss_pred cccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCc--cccccccccccCHHHHHHHhhcchhhh
Confidence 9999999987665 221234678999999999865421 0111111 1234678899999999998
Q ss_pred hhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHH
Q 019279 150 NNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNP 229 (343)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~ 229 (343)
..-.. .....+.+.....+++...|++|.++|||+|+|+++|+++.+|...... ...+.+..++..||.
T Consensus 176 ~~~~~-------~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~----~~~~~a~~~t~~~Na 244 (370)
T COG3240 176 ALPML-------KAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG----TEAIQASQATIAFNA 244 (370)
T ss_pred ccccc-------chhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc----chHHHHHHHHHHHHH
Confidence 53111 0111122333445679999999999999999999999999999998642 233488999999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCC-CCCCCceEeCCCCh
Q 019279 230 QLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLC-PNRAVYAFWDPFHP 308 (343)
Q Consensus 230 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C-~~p~~ylfwD~vHP 308 (343)
.|++.|++++ .+|+++|++.+++++++||++|||+|++..||.....++ .|.+..+.| ..|++|+|||++||
T Consensus 245 ~L~~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~~~~~--~~~a~~p~~~~~~~~ylFaD~vHP 317 (370)
T COG3240 245 SLTSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDATVSNP--ACSASLPALCAAPQKYLFADSVHP 317 (370)
T ss_pred HHHHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcccCCc--ccccccccccCCccceeeecccCC
Confidence 9999999984 799999999999999999999999999999998765443 677666654 45778999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcCCCChHHh
Q 019279 309 SERANGFIVQEFMTGSTEYMYPMNLSTI 336 (343)
Q Consensus 309 T~~~h~~iA~~~~~~~~~~~~P~~~~~l 336 (343)
|+++|++||++++.. +.+|+....|
T Consensus 318 Tt~~H~liAeyila~---l~ap~~~~~l 342 (370)
T COG3240 318 TTAVHHLIAEYILAR---LAAPFSLTIL 342 (370)
T ss_pred chHHHHHHHHHHHHH---HhCcchhhHH
Confidence 999999999999996 5677665544
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.95 E-value=3.5e-28 Score=217.14 Aligned_cols=146 Identities=25% Similarity=0.470 Sum_probs=121.7
Q ss_pred ccCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCc-----EEEEeCCCCCCCcccccc
Q 019279 134 VNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGAR-----RVLVTGTGPLGCVPAERA 208 (343)
Q Consensus 134 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar-----~~vv~~lpplg~~P~~~~ 208 (343)
.+.+|++||+|+||++... ........++.+++++.+.|++|++.|+| +++++++||++|.|....
T Consensus 81 ~~~~lv~i~~G~ND~~~~~---------~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
T PF00657_consen 81 YDPDLVVIWIGTNDYFNNR---------DSSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSS 151 (234)
T ss_dssp HTTSEEEEE-SHHHHSSCC---------SCSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHH
T ss_pred CCcceEEEecccCcchhhc---------ccchhhhhHhhHhhhhhhhhhHHhccCCcccccccccccccccccccccccc
Confidence 4789999999999996311 11233566788999999999999999999 999999999999888776
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcC-CceEEEEcchHHHHHH--HhCCcCCCCccccccccCCCCCCCCc
Q 019279 209 MRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYG-SEIFVAVNTGKMQYNF--ISNPRAFGFTTSKVACCGQGPYNGLG 285 (343)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~-~~~i~~~D~~~~~~~i--~~np~~yGf~~~~~~Cc~~~~~~~~~ 285 (343)
.......|.+.+++.++.||+.|++.+.+++++++ +.++.++|+++.+.+. ..+|..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~-------------------- 211 (234)
T PF00657_consen 152 NNKDSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPEN-------------------- 211 (234)
T ss_dssp THTTTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGH--------------------
T ss_pred ccccccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHHHHhhhccCccc--------------------
Confidence 65445689999999999999999999999988776 8899999999999988 666554
Q ss_pred cCCCCCCCCCCCCCceEeCCCChhHHHHHHHHHHH
Q 019279 286 LCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEF 320 (343)
Q Consensus 286 ~c~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~ 320 (343)
++|+|||++|||+++|++||++|
T Consensus 212 ------------~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 212 ------------DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp ------------HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred ------------ceeccCCCcCCCHHHHHHHHcCC
Confidence 26899999999999999999986
No 8
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.51 E-value=2.7e-13 Score=119.88 Aligned_cols=120 Identities=14% Similarity=0.151 Sum_probs=79.2
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHc------CCcEEEEeCCCCCCCcccccc
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDL------GARRVLVTGTGPLGCVPAERA 208 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~------Gar~~vv~~lpplg~~P~~~~ 208 (343)
..++++|++|.||+...+. .+ .+...+++.+.|+++.+. +..+|+++..||+...+...
T Consensus 79 ~pd~vii~lGtND~~~~~~----------~~----~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~- 143 (208)
T cd01839 79 PLDLVIIMLGTNDLKSYFN----------LS----AAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL- 143 (208)
T ss_pred CCCEEEEeccccccccccC----------CC----HHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch-
Confidence 5689999999999864211 11 244566666777777665 35679999988872221111
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCC
Q 019279 209 MRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCT 288 (343)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~ 288 (343)
..+....++....||+.+++..++. ++.++|.+.++..
T Consensus 144 -----~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~------------------------------ 181 (208)
T cd01839 144 -----AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGST------------------------------ 181 (208)
T ss_pred -----hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhcc------------------------------
Confidence 1122344666777887777766543 4777897765310
Q ss_pred CCCCCCCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 289 PASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 289 ~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
+..|++|||++||++||+.+++.
T Consensus 182 ------------~~~DGvH~~~~G~~~~a~~l~~~ 204 (208)
T cd01839 182 ------------SPVDGVHLDADQHAALGQALASV 204 (208)
T ss_pred ------------CCCCccCcCHHHHHHHHHHHHHH
Confidence 22599999999999999998863
No 9
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.46 E-value=8.9e-13 Score=114.84 Aligned_cols=121 Identities=23% Similarity=0.245 Sum_probs=82.9
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHH-cCCcEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYD-LGARRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~-~Gar~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
..++++|.+|+||+.... . .++..+++.+.++++.+ ....+|++.++||++..|....
T Consensus 67 ~pd~Vii~~G~ND~~~~~------------~----~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~----- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHLT------------S----IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ----- 125 (191)
T ss_pred CCCEEEEEecccCcCCCC------------C----HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-----
Confidence 568999999999986310 1 34557777888888876 3456899999999876654321
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
.....+++..+.+|+.+++..++ ++ .+.++|++..+.
T Consensus 126 -~~~~~~~~~~~~~n~~~~~~a~~----~~--~~~~id~~~~~~------------------------------------ 162 (191)
T cd01836 126 -PLRWLLGRRARLLNRALERLASE----AP--RVTLLPATGPLF------------------------------------ 162 (191)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhc----CC--CeEEEecCCccc------------------------------------
Confidence 11234455566777766665543 33 567788876542
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
..++..|++|||++||+++|+.+.+.
T Consensus 163 ----~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 ----PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred ----hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 02244699999999999999998764
No 10
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=99.46 E-value=1.9e-12 Score=112.07 Aligned_cols=117 Identities=18% Similarity=0.180 Sum_probs=78.7
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCC-CCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPL-GCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lppl-g~~P~~~~~~~~~ 213 (343)
..++++|.+|.||.... ..+ .++..+++...|+++...++ +++++++||. +..|..
T Consensus 67 ~~d~vii~~G~ND~~~~-----------~~~----~~~~~~~~~~~i~~i~~~~~-~vil~~~~~~~~~~~~~------- 123 (185)
T cd01832 67 RPDLVTLLAGGNDILRP-----------GTD----PDTYRADLEEAVRRLRAAGA-RVVVFTIPDPAVLEPFR------- 123 (185)
T ss_pred CCCEEEEeccccccccC-----------CCC----HHHHHHHHHHHHHHHHhCCC-EEEEecCCCccccchhH-------
Confidence 45799999999998631 012 24456677778888876676 5888898887 322221
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
...++..+.+|+.|++..++. ++.++|++..+. +.
T Consensus 124 ----~~~~~~~~~~n~~l~~~a~~~-------~v~~vd~~~~~~------------------~~---------------- 158 (185)
T cd01832 124 ----RRVRARLAAYNAVIRAVAARY-------GAVHVDLWEHPE------------------FA---------------- 158 (185)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHc-------CCEEEecccCcc------------------cC----------------
Confidence 223456778888887765542 578899876532 00
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
. ..++.-|++||+++||++||+.+++
T Consensus 159 --~-~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 159 --D-PRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred --C-ccccccCCCCCChhHHHHHHHHHhh
Confidence 0 1234459999999999999999875
No 11
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=99.42 E-value=7.6e-12 Score=108.20 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=82.5
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 214 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~ 214 (343)
..++++|.+|.||..... . .++..+++.+.|+.+.+.|++ ++++..+|....+...
T Consensus 59 ~~d~v~i~~G~ND~~~~~------------~----~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~------- 114 (183)
T cd04501 59 KPAVVIIMGGTNDIIVNT------------S----LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP------- 114 (183)
T ss_pred CCCEEEEEeccCccccCC------------C----HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch-------
Confidence 458899999999986310 1 234567777888888888875 6666777665433211
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCC
Q 019279 215 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLC 294 (343)
Q Consensus 215 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C 294 (343)
+....++....||+.+++..++. ++.++|.+..+.+... .
T Consensus 115 -~~~~~~~~~~~~n~~~~~~a~~~-------~v~~vd~~~~~~~~~~-------~------------------------- 154 (183)
T cd04501 115 -QWLRPANKLKSLNRWLKDYAREN-------GLLFLDFYSPLLDERN-------V------------------------- 154 (183)
T ss_pred -hhcchHHHHHHHHHHHHHHHHHc-------CCCEEechhhhhcccc-------c-------------------------
Confidence 11234556677888777765542 5888999988664211 0
Q ss_pred CCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 295 PNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 295 ~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
.....+..|++||+++||++||+.+.+.
T Consensus 155 -~~~~~~~~DgvHp~~~Gy~~~a~~i~~~ 182 (183)
T cd04501 155 -GLKPGLLTDGLHPSREGYRVMAPLAEKA 182 (183)
T ss_pred -cccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 0113355799999999999999998764
No 12
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.42 E-value=5.8e-12 Score=109.11 Aligned_cols=129 Identities=14% Similarity=0.150 Sum_probs=87.7
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHH-HcCCcEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLY-DLGARRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~-~~Gar~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
..++++|++|.||+..... .... .+...+++.+.|+.+. .....+|++++.+|....+...
T Consensus 61 ~~d~v~l~~G~ND~~~~~~--------~~~~----~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~------ 122 (191)
T cd01834 61 KPDVVSIMFGINDSFRGFD--------DPVG----LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL------ 122 (191)
T ss_pred CCCEEEEEeecchHhhccc--------cccc----HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC------
Confidence 4589999999999985321 0111 3455777888888885 3344568888776654322110
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
.-.+..+.....||+.+++..++. ++.++|++..+.+....+
T Consensus 123 -~~~~~~~~~~~~~n~~l~~~a~~~-------~~~~iD~~~~~~~~~~~~------------------------------ 164 (191)
T cd01834 123 -PDGAEYNANLAAYADAVRELAAEN-------GVAFVDLFTPMKEAFQKA------------------------------ 164 (191)
T ss_pred -CChHHHHHHHHHHHHHHHHHHHHc-------CCeEEecHHHHHHHHHhC------------------------------
Confidence 013456777888888887765432 588899999988655432
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
+..++++|++||+++||++||+.+.+
T Consensus 165 ---~~~~~~~D~~Hpn~~G~~~~a~~~~~ 190 (191)
T cd01834 165 ---GEAVLTVDGVHPNEAGHRALARLWLE 190 (191)
T ss_pred ---CCccccCCCCCCCHHHHHHHHHHHHh
Confidence 11347789999999999999999876
No 13
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=99.40 E-value=3.6e-12 Score=111.47 Aligned_cols=111 Identities=16% Similarity=0.213 Sum_probs=69.8
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEe-CCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVT-GTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~-~lpplg~~P~~~~~~~~~ 213 (343)
+.++++|.+|+||.... .+ .+...+++.+.++++.+.|++.+++. .+|+ .+.
T Consensus 71 ~pd~Vii~~GtND~~~~------------~~----~~~~~~~l~~li~~~~~~~~~~ill~~~~P~-----~~~------ 123 (191)
T PRK10528 71 QPRWVLVELGGNDGLRG------------FP----PQQTEQTLRQIIQDVKAANAQPLLMQIRLPA-----NYG------ 123 (191)
T ss_pred CCCEEEEEeccCcCccC------------CC----HHHHHHHHHHHHHHHHHcCCCEEEEEeecCC-----ccc------
Confidence 45899999999998521 11 34567788888888888898877663 2232 110
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
..+++.+.+.++++.+++ ++.++|.+..... .
T Consensus 124 -----------~~~~~~~~~~~~~~a~~~---~v~~id~~~~~~~--~-------------------------------- 155 (191)
T PRK10528 124 -----------RRYNEAFSAIYPKLAKEF---DIPLLPFFMEEVY--L-------------------------------- 155 (191)
T ss_pred -----------HHHHHHHHHHHHHHHHHh---CCCccHHHHHhhc--c--------------------------------
Confidence 112333444445555554 3556776522100 0
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
+ .+++..|++||+++||++||+.+.+.
T Consensus 156 --~-~~~~~~DGiHpn~~Gy~~~A~~i~~~ 182 (191)
T PRK10528 156 --K-PQWMQDDGIHPNRDAQPFIADWMAKQ 182 (191)
T ss_pred --C-HhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 0 13466799999999999999999885
No 14
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=99.40 E-value=4.2e-12 Score=110.75 Aligned_cols=134 Identities=14% Similarity=0.167 Sum_probs=83.8
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHH--cCCcEEEEeCCCCCCCccccccccCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYD--LGARRVLVTGTGPLGCVPAERAMRGR 212 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~--~Gar~~vv~~lpplg~~P~~~~~~~~ 212 (343)
+.++++|++|.||..... .....+ .+...+++...|+++.+ .++ ++++++.||+.......... .
T Consensus 63 ~pd~vii~~G~ND~~~~~-------~~~~~~----~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~-~ 129 (199)
T cd01838 63 QPDLVTIFFGANDAALPG-------QPQHVP----LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLE-D 129 (199)
T ss_pred CceEEEEEecCccccCCC-------CCCccc----HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhc-c
Confidence 578999999999997421 000012 34556677777777776 455 68888888765322110000 0
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCC
Q 019279 213 NGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASN 292 (343)
Q Consensus 213 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~ 292 (343)
........++..+.||+.+++..++. .+.++|+++.+...- .
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~~~~---~---------------------------- 171 (199)
T cd01838 130 GGSQPGRTNELLKQYAEACVEVAEEL-------GVPVIDLWTAMQEEA---G---------------------------- 171 (199)
T ss_pred ccCCccccHHHHHHHHHHHHHHHHHh-------CCcEEEHHHHHHhcc---C----------------------------
Confidence 00112345667788888777655543 477899998776311 0
Q ss_pred CCCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 293 LCPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 293 ~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
....++.|++||+++||++||+.+.+.
T Consensus 172 ----~~~~~~~Dg~Hpn~~G~~~~a~~l~~~ 198 (199)
T cd01838 172 ----WLESLLTDGLHFSSKGYELLFEEIVKV 198 (199)
T ss_pred ----chhhhcCCCCCcCHhHHHHHHHHHHhh
Confidence 002255799999999999999998763
No 15
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.39 E-value=6.5e-12 Score=110.85 Aligned_cols=128 Identities=17% Similarity=0.159 Sum_probs=74.9
Q ss_pred CcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCC
Q 019279 136 GALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQ 215 (343)
Q Consensus 136 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~ 215 (343)
..+++|++|.||+...... .. .....++...+++...++++.+.|+ +++++++||..-.+...
T Consensus 75 p~~vii~~G~ND~~~~~~~-----~~---~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~~~~~~~-------- 137 (204)
T cd01830 75 VRTVIILEGVNDIGASGTD-----FA---AAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFEGSGYYT-------- 137 (204)
T ss_pred CCEEEEecccccccccccc-----cc---cCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCCCCCCCC--------
Confidence 4688999999999642110 00 0111245667888899999988887 57788888764322211
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCCC
Q 019279 216 CAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCP 295 (343)
Q Consensus 216 ~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C~ 295 (343)
.....+...+|+.+ .+. .... .++|++..+.+... +..
T Consensus 138 --~~~~~~~~~~n~~~----~~~----~~~~-~~vD~~~~~~~~~~-~~~------------------------------ 175 (204)
T cd01830 138 --PAREATRQAVNEWI----RTS----GAFD-AVVDFDAALRDPAD-PSR------------------------------ 175 (204)
T ss_pred --HHHHHHHHHHHHHH----Hcc----CCCC-eeeEhHHhhcCCCC-chh------------------------------
Confidence 11222223333333 222 1112 35899877543110 000
Q ss_pred CCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 296 NRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 296 ~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
-...|+..|++||+++||++||+.+..
T Consensus 176 ~~~~~~~~DGvHpn~~Gy~~~A~~i~~ 202 (204)
T cd01830 176 LRPAYDSGDHLHPNDAGYQAMADAVDL 202 (204)
T ss_pred cccccCCCCCCCCCHHHHHHHHHhcCC
Confidence 012456689999999999999998765
No 16
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=99.38 E-value=6.6e-12 Score=107.70 Aligned_cols=121 Identities=13% Similarity=0.137 Sum_probs=83.4
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLG-ARRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~G-ar~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
+.++++|++|+||+.... + .+...+++.+.++++.+.. ..+++++++||+...+.
T Consensus 51 ~pd~v~i~~G~ND~~~~~------------~----~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~-------- 106 (174)
T cd01841 51 NPSKVFLFLGTNDIGKEV------------S----SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE-------- 106 (174)
T ss_pred CCCEEEEEeccccCCCCC------------C----HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc--------
Confidence 458889999999985311 2 3455778888888887753 56799999988643221
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
+....++..+.||+.+++..++. ++.++|++..+.+-. |
T Consensus 107 --~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~~~------~-------------------------- 145 (174)
T cd01841 107 --IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVDEF------G-------------------------- 145 (174)
T ss_pred --cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcCCC------C--------------------------
Confidence 11233456788998888765543 488899998764210 0
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
.....+..|++|||++||++||+.+.+
T Consensus 146 --~~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 146 --NLKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred --CccccccCCCcccCHHHHHHHHHHHHh
Confidence 001235679999999999999999865
No 17
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=99.36 E-value=2e-11 Score=111.54 Aligned_cols=161 Identities=18% Similarity=0.146 Sum_probs=89.1
Q ss_pred cCcEEEEEeccchhhhhhhcCc-cCc----------cCCCCChhHHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVP-YSA----------RSRQFSLPDYVKYVISEYRKLLTRLYDLG-ARRVLVTGTGPLGC 202 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~-~~~----------~~~~~~~~~~v~~~v~~~~~~l~~L~~~G-ar~~vv~~lpplg~ 202 (343)
.-++++|.+|+||+........ ... ...........+...+++.+.|++|.+.. -.+|++++.|++--
T Consensus 80 ~~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~ 159 (259)
T cd01823 80 DTDLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFP 159 (259)
T ss_pred CCCEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEeccccccc
Confidence 4689999999999864321100 000 00001112334566777888888887643 34699999887531
Q ss_pred c-cccccc---c--CCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCcccccccc
Q 019279 203 V-PAERAM---R--GRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACC 276 (343)
Q Consensus 203 ~-P~~~~~---~--~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc 276 (343)
. ...... . .-.....+..++..+.+|+.+++..++. ...++.|+|++..+..- ..|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~~----~~~~v~fvD~~~~f~~~-------------~~~~ 222 (259)
T cd01823 160 PDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAADA----GDYKVRFVDTDAPFAGH-------------RACS 222 (259)
T ss_pred CCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh----CCceEEEEECCCCcCCC-------------cccc
Confidence 1 000000 0 0001123456677777887777766554 22569999999875421 1222
Q ss_pred CCCCCCCCccCCCCCCCCCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 277 GQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 277 ~~~~~~~~~~c~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
.... +. . -.+....+.-|++|||++||+.||+.+.+
T Consensus 223 ~~~~------~~-~---~~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 223 PDPW------SR-S---VLDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred CCCc------cc-c---ccCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 2110 00 0 00112334579999999999999999875
No 18
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=99.36 E-value=2.2e-11 Score=113.00 Aligned_cols=181 Identities=19% Similarity=0.168 Sum_probs=104.4
Q ss_pred hhhhcCccccCCCCCCcccccCHHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhhcCccCccCCCC
Q 019279 85 NFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQF 164 (343)
Q Consensus 85 NyA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~ 164 (343)
|+|+.|++ ..+|..|++...+..++ . ........-.|++|+||+||+..... ....
T Consensus 86 N~av~Ga~-----------s~dL~~qa~~lv~r~~~---~---~~i~~~~dwklVtI~IG~ND~c~~~~------~~~~- 141 (288)
T cd01824 86 NVAEPGAK-----------SEDLPQQARLLVRRMKK---D---PRVDFKNDWKLITIFIGGNDLCSLCE------DANP- 141 (288)
T ss_pred eecccCcc-----------hhhHHHHHHHHHHHHhh---c---cccccccCCcEEEEEecchhHhhhcc------cccC-
Confidence 66666666 34678888755443221 0 00001123467999999999985211 1111
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCc-EEEEeCCCCCCCccccccccC-----CCCCch----------HHHHHHHHHHH
Q 019279 165 SLPDYVKYVISEYRKLLTRLYDLGAR-RVLVTGTGPLGCVPAERAMRG-----RNGQCA----------ADLQRAADLYN 228 (343)
Q Consensus 165 ~~~~~v~~~v~~~~~~l~~L~~~Gar-~~vv~~lpplg~~P~~~~~~~-----~~~~~~----------~~~~~~~~~~N 228 (343)
...+...+++.+.|+.|.+..-| .|+++++|++..++....... ....|. +.+.+..+.|+
T Consensus 142 ---~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~~~y~ 218 (288)
T cd01824 142 ---GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKFYKEYQ 218 (288)
T ss_pred ---cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHHHHHHH
Confidence 12455577888888989887754 577888888765444321100 012231 36677788888
Q ss_pred HHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCCCCCCCceEeCCCCh
Q 019279 229 PQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHP 308 (343)
Q Consensus 229 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C~~p~~ylfwD~vHP 308 (343)
+.+++.+++-+-...+..+++ +.++.+.+..+..-| .| .+++-+|.+||
T Consensus 219 ~~~~eia~~~~~~~~~f~vv~---qPf~~~~~~~~~~~g---------------------------~d-~~~~~~D~~Hp 267 (288)
T cd01824 219 NEVEEIVESGEFDREDFAVVV---QPFFEDTSLPPLPDG---------------------------PD-LSFFSPDCFHF 267 (288)
T ss_pred HHHHHHHhcccccccCccEEe---eCchhccccccccCC---------------------------Cc-chhcCCCCCCC
Confidence 888776665322223344444 223333221111111 11 15677999999
Q ss_pred hHHHHHHHHHHHHcC
Q 019279 309 SERANGFIVQEFMTG 323 (343)
Q Consensus 309 T~~~h~~iA~~~~~~ 323 (343)
+++||.+||+.++..
T Consensus 268 s~~G~~~ia~~lwn~ 282 (288)
T cd01824 268 SQRGHAIAANALWNN 282 (288)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999885
No 19
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=99.34 E-value=1.5e-11 Score=107.87 Aligned_cols=133 Identities=13% Similarity=0.037 Sum_probs=83.6
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 214 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~ 214 (343)
+.++++|.+|.||...... ..... ++...+++.+.|+++.+.|++ +++++.||.... ..
T Consensus 65 ~pdlVii~~G~ND~~~~~~-------~~~~~----~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~~---~~------ 123 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKDP-------EYTEP----YTTYKEYLRRYIAEARAKGAT-PILVTPVTRRTF---DE------ 123 (198)
T ss_pred CCCEEEEECCCCCCCCCCC-------CCCCc----HHHHHHHHHHHHHHHHHCCCe-EEEECCcccccc---CC------
Confidence 4699999999999863210 00111 455677888888888888885 556665553211 10
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCC
Q 019279 215 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLC 294 (343)
Q Consensus 215 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C 294 (343)
+ ...+.....||+.+++..++. .+.++|++..+.+..+.-..-+ ...
T Consensus 124 -~-~~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~~~---~~~--------------------- 170 (198)
T cd01821 124 -G-GKVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGPEK---SKK--------------------- 170 (198)
T ss_pred -C-CcccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhChHh---HHh---------------------
Confidence 0 022334567777777766554 5778999999887654211000 000
Q ss_pred CCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 295 PNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 295 ~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
.. .++..|++||+++||++||+.+++.
T Consensus 171 -~~-~~~~~DgvHp~~~G~~~~a~~i~~~ 197 (198)
T cd01821 171 -YF-PEGPGDNTHFSEKGADVVARLVAEE 197 (198)
T ss_pred -hC-cCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 00 1355799999999999999998864
No 20
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.34 E-value=4.2e-11 Score=103.25 Aligned_cols=119 Identities=13% Similarity=0.082 Sum_probs=74.5
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGA-RRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Ga-r~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
...+++|.+|.||.... . +..+++.+.+++|.+... .+|++++.||... ....
T Consensus 57 ~pd~vii~~G~ND~~~~---------------~----~~~~~~~~~i~~i~~~~p~~~iil~~~~~~~~---~~~~---- 110 (177)
T cd01844 57 PADLYIIDCGPNIVGAE---------------A----MVRERLGPLVKGLRETHPDTPILLVSPRYCPD---AELT---- 110 (177)
T ss_pred CCCEEEEEeccCCCccH---------------H----HHHHHHHHHHHHHHHHCcCCCEEEEecCCCCc---cccC----
Confidence 46899999999997410 0 457788888888888764 4688888776432 1111
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
.......++.. ..+.+.+++++++ ..-++.++|.+.++.. +
T Consensus 111 ~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~v~~id~~~~~~~---~------------------------------- 151 (177)
T cd01844 111 PGRGKLTLAVR----RALREAFEKLRAD-GVPNLYYLDGEELLGP---D------------------------------- 151 (177)
T ss_pred cchhHHHHHHH----HHHHHHHHHHHhc-CCCCEEEecchhhcCC---C-------------------------------
Confidence 11122333333 4444444444432 2337889998765321 0
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
.-++.|++|||++||++||+.+.+.
T Consensus 152 -----~~~~~DglHpn~~Gy~~~a~~l~~~ 176 (177)
T cd01844 152 -----GEALVDGIHPTDLGHMRYADRFEPV 176 (177)
T ss_pred -----CCCCCCCCCCCHHHHHHHHHHHhhc
Confidence 0145699999999999999998763
No 21
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.32 E-value=2.5e-11 Score=105.36 Aligned_cols=119 Identities=12% Similarity=0.111 Sum_probs=74.1
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGA-RRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Ga-r~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
..++++|.+|.||..... ... .+...+++.+.|+++.+.+. .+|+++++||......
T Consensus 67 ~pd~Vii~~G~ND~~~~~----------~~~----~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~-------- 124 (188)
T cd01827 67 NPNIVIIKLGTNDAKPQN----------WKY----KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG-------- 124 (188)
T ss_pred CCCEEEEEcccCCCCCCC----------Ccc----HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC--------
Confidence 458999999999986311 001 23345677778888777653 4788888776532111
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
.. ...+...+.+|+.+++..++ + .+.++|.+..+.. +
T Consensus 125 -~~-~~~~~~~~~~~~~~~~~a~~----~---~~~~vD~~~~~~~---~------------------------------- 161 (188)
T cd01827 125 -GF-INDNIIKKEIQPMIDKIAKK----L---NLKLIDLHTPLKG---K------------------------------- 161 (188)
T ss_pred -Cc-cchHHHHHHHHHHHHHHHHH----c---CCcEEEccccccC---C-------------------------------
Confidence 00 11223445566666555433 2 5677898875321 0
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
+ .+.-|++||+++||++||+.+.+.
T Consensus 162 ---~--~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 162 ---P--ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred ---c--cccCCCCCcCHHHHHHHHHHHHHH
Confidence 0 134599999999999999999875
No 22
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.32 E-value=2.3e-11 Score=103.85 Aligned_cols=118 Identities=19% Similarity=0.211 Sum_probs=80.0
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHH--cCCcEEEEeCCCCCCCccccccccCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYD--LGARRVLVTGTGPLGCVPAERAMRGR 212 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~--~Gar~~vv~~lpplg~~P~~~~~~~~ 212 (343)
..++++|.+|.||..... + .+...+++.+.|+++.+ .++ +|+++++||.+ +.
T Consensus 48 ~pd~vvl~~G~ND~~~~~------------~----~~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~------- 101 (169)
T cd01828 48 QPKAIFIMIGINDLAQGT------------S----DEDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL------- 101 (169)
T ss_pred CCCEEEEEeeccCCCCCC------------C----HHHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc-------
Confidence 458999999999985321 2 24456677777777777 444 68888888765 10
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCC
Q 019279 213 NGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASN 292 (343)
Q Consensus 213 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~ 292 (343)
....++.+..+|+.+++..++ + ++.++|+++.+.+ ..|
T Consensus 102 ----~~~~~~~~~~~n~~l~~~a~~-----~--~~~~id~~~~~~~------~~~------------------------- 139 (169)
T cd01828 102 ----KSIPNEQIEELNRQLAQLAQQ-----E--GVTFLDLWAVFTN------ADG------------------------- 139 (169)
T ss_pred ----CcCCHHHHHHHHHHHHHHHHH-----C--CCEEEechhhhcC------CCC-------------------------
Confidence 112335567888888876552 2 5677899876531 000
Q ss_pred CCCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 293 LCPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 293 ~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
+..+++..|++|||++||+++|+.+.+-
T Consensus 140 ---~~~~~~~~DgiHpn~~G~~~~a~~i~~~ 167 (169)
T cd01828 140 ---DLKNEFTTDGLHLNAKGYAVWAAALQPY 167 (169)
T ss_pred ---CcchhhccCccccCHHHHHHHHHHHHHh
Confidence 0124567899999999999999999874
No 23
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=99.31 E-value=5.4e-11 Score=104.71 Aligned_cols=134 Identities=14% Similarity=0.192 Sum_probs=84.0
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCc-EEEEeCCC-CCCCccccccccCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGAR-RVLVTGTG-PLGCVPAERAMRGR 212 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar-~~vv~~lp-plg~~P~~~~~~~~ 212 (343)
...+++|.+|+||+....... ..+ ........-.+....++.+.|+++.+.+.+ +|++++++ |.. ...
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~-----~~~--- 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKN-FLS-LDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFY-----VYF--- 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhc-ccc-chHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCccc-----ccc---
Confidence 568899999999998543210 000 000011123456677888888888877643 67777753 221 111
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCC
Q 019279 213 NGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASN 292 (343)
Q Consensus 213 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~ 292 (343)
.-....++.+..||+.+++..++. .++.++|++..+...-
T Consensus 138 --~~~~~~~~~~~~~n~~~~~~a~~~------~~v~~vd~~~~~~~~~-------------------------------- 177 (204)
T cd04506 138 --PNITEINDIVNDWNEASQKLASQY------KNAYFVPIFDLFSDGQ-------------------------------- 177 (204)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHhC------CCeEEEehHHhhcCCc--------------------------------
Confidence 112345678888998877765432 2488899998765210
Q ss_pred CCCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 293 LCPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 293 ~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
+..++..|++||+++||++||+.+++
T Consensus 178 ----~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 178 ----NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred ----ccccccccCcCCCHHHHHHHHHHHHh
Confidence 01345679999999999999999875
No 24
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=99.29 E-value=2.5e-11 Score=107.97 Aligned_cols=120 Identities=13% Similarity=0.121 Sum_probs=79.5
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLG-ARRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~G-ar~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
...+++|++|+||+.... + .+++.+++.+.|+++.+.. -.+|++++++|.+..|
T Consensus 89 ~pd~VvI~~G~ND~~~~~------------~----~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~--------- 143 (214)
T cd01820 89 NPKVVVLLIGTNNIGHTT------------T----AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP--------- 143 (214)
T ss_pred CCCEEEEEecccccCCCC------------C----HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc---------
Confidence 468899999999985321 1 3455778888888887764 3468888888765321
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
..+.+....+|+.+++...+ ..++.++|++..+.+ .. |
T Consensus 144 ----~~~~~~~~~~n~~l~~~~~~------~~~v~~vd~~~~~~~---~~---g-------------------------- 181 (214)
T cd01820 144 ----NPLRERNAQVNRLLAVRYDG------LPNVTFLDIDKGFVQ---SD---G-------------------------- 181 (214)
T ss_pred ----hhHHHHHHHHHHHHHHHhcC------CCCEEEEeCchhhcc---cC---C--------------------------
Confidence 12334456777776654321 226888999887541 00 0
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
...+.++.|++||+++||++||+.+.+.
T Consensus 182 --~~~~~~~~DGlHpn~~Gy~~~a~~l~~~ 209 (214)
T cd01820 182 --TISHHDMPDYLHLTAAGYRKWADALHPT 209 (214)
T ss_pred --CcCHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0012245799999999999999999874
No 25
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=99.27 E-value=4e-11 Score=101.67 Aligned_cols=119 Identities=22% Similarity=0.276 Sum_probs=79.6
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 214 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~ 214 (343)
.-++++|.+|+||+... . ......+...+++.+.|+++...+ +++++.+||....+...
T Consensus 61 ~~d~vvi~~G~ND~~~~-~-----------~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~------- 119 (179)
T PF13472_consen 61 KPDLVVISFGTNDVLNG-D-----------ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP------- 119 (179)
T ss_dssp TCSEEEEE--HHHHCTC-T-----------TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT-------
T ss_pred CCCEEEEEccccccccc-c-----------cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc-------
Confidence 45799999999999742 0 123446777888888899998778 88998888765433221
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCC
Q 019279 215 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLC 294 (343)
Q Consensus 215 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C 294 (343)
+.+........+|+.+++..++. .+.++|+...+.+ +..
T Consensus 120 -~~~~~~~~~~~~~~~~~~~a~~~-------~~~~id~~~~~~~----~~~----------------------------- 158 (179)
T PF13472_consen 120 -KQDYLNRRIDRYNQAIRELAKKY-------GVPFIDLFDAFDD----HDG----------------------------- 158 (179)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHHHC-------TEEEEEHHHHHBT----TTS-----------------------------
T ss_pred -cchhhhhhHHHHHHHHHHHHHHc-------CCEEEECHHHHcc----ccc-----------------------------
Confidence 12345566777888777655432 6888999988552 100
Q ss_pred CCCCCceEeCCCChhHHHHHHH
Q 019279 295 PNRAVYAFWDPFHPSERANGFI 316 (343)
Q Consensus 295 ~~p~~ylfwD~vHPT~~~h~~i 316 (343)
....+++.|++|||++||++|
T Consensus 159 -~~~~~~~~D~~Hp~~~G~~~~ 179 (179)
T PF13472_consen 159 -WFPKYYFSDGVHPNPAGHQLI 179 (179)
T ss_dssp -CBHTCTBTTSSSBBHHHHHHH
T ss_pred -cchhhcCCCCCCcCHHHhCcC
Confidence 111456789999999999986
No 26
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.26 E-value=8.6e-11 Score=102.51 Aligned_cols=123 Identities=19% Similarity=0.186 Sum_probs=73.1
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 214 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~ 214 (343)
+.++++|.+|.||...... . ...... +...+.+...++++ +.++ +|+++++||+....
T Consensus 69 ~pd~V~i~~G~ND~~~~~~-----~-~~~~~~----~~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGR-----K-RPQLSA----RAFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------- 126 (193)
T ss_pred CCCEEEEEecCcccccccC-----c-ccccCH----HHHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------
Confidence 5689999999999974310 0 011122 22233344444433 2344 58888887764211
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCC
Q 019279 215 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLC 294 (343)
Q Consensus 215 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C 294 (343)
....+.....+|+.+++..++. ++.++|++..+.+. +. .
T Consensus 127 --~~~~~~~~~~~n~~~~~~a~~~-------~~~~vd~~~~~~~~---~~---~-------------------------- 165 (193)
T cd01835 127 --MPYSNRRIARLETAFAEVCLRR-------DVPFLDTFTPLLNH---PQ---W-------------------------- 165 (193)
T ss_pred --cchhhHHHHHHHHHHHHHHHHc-------CCCeEeCccchhcC---cH---H--------------------------
Confidence 0123455677787777765442 56789999876541 10 0
Q ss_pred CCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 295 PNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 295 ~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
...++..|++|||++||++||+.+..
T Consensus 166 --~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 166 --RRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred --HHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 00223359999999999999999875
No 27
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.25 E-value=5.4e-11 Score=103.09 Aligned_cols=128 Identities=13% Similarity=0.035 Sum_probs=79.2
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDL-GARRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~-Gar~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
+.++++|.+|.||..... .. .+...+++...|+++.+. ...+|++++.||....+..
T Consensus 56 ~pd~Vii~~G~ND~~~~~-----------~~----~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~------- 113 (189)
T cd01825 56 PPDLVILSYGTNEAFNKQ-----------LN----ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGA------- 113 (189)
T ss_pred CCCEEEEECCCcccccCC-----------CC----HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCC-------
Confidence 457899999999975310 11 345577788888888774 4557888888775332210
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
+....+...+.+|+.+++..++ + .+.++|++..+.+. | +. .
T Consensus 114 --~~~~~~~~~~~~~~~~~~~a~~----~---~v~~vd~~~~~~~~---------------~-~~--------------~ 154 (189)
T cd01825 114 --GRWRTPPGLDAVIAAQRRVAKE----E---GIAFWDLYAAMGGE---------------G-GI--------------W 154 (189)
T ss_pred --CCcccCCcHHHHHHHHHHHHHH----c---CCeEEeHHHHhCCc---------------c-hh--------------h
Confidence 0111223345666666655433 2 37889999875421 0 00 0
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
......++..|++|||++||+.||+.+.+.
T Consensus 155 ~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~ 184 (189)
T cd01825 155 QWAEPGLARKDYVHLTPRGYERLANLLYEA 184 (189)
T ss_pred HhhcccccCCCcccCCcchHHHHHHHHHHH
Confidence 001113456799999999999999999874
No 28
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=99.25 E-value=1.2e-10 Score=98.40 Aligned_cols=122 Identities=17% Similarity=0.175 Sum_probs=83.4
Q ss_pred ccCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHH-cCCcEEEEeCCCCCCCccccccccCC
Q 019279 134 VNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYD-LGARRVLVTGTGPLGCVPAERAMRGR 212 (343)
Q Consensus 134 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~-~Gar~~vv~~lpplg~~P~~~~~~~~ 212 (343)
...+++++.+|+||+.... ... .....+.+.+.++++.+ ....+|++++.|+....|.
T Consensus 64 ~~~d~vil~~G~ND~~~~~----------~~~----~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~------- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG----------DTS----IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG------- 122 (187)
T ss_pred CCCCEEEEEeccccccccc----------ccC----HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch-------
Confidence 4679999999999996321 001 23345556666666664 4556789999988776554
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCC
Q 019279 213 NGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASN 292 (343)
Q Consensus 213 ~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~ 292 (343)
........+|..+++..++.... ..+.++|++..+...
T Consensus 123 ------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~--------------------------------- 160 (187)
T cd00229 123 ------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE--------------------------------- 160 (187)
T ss_pred ------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC---------------------------------
Confidence 12344567777777766655321 357889988775532
Q ss_pred CCCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 293 LCPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 293 ~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
+..++++|++|||++||+++|+.+++
T Consensus 161 ----~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 ----DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred ----ccccccCCCCCCchhhHHHHHHHHhc
Confidence 12568899999999999999999875
No 29
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=99.25 E-value=1.7e-10 Score=98.82 Aligned_cols=112 Identities=18% Similarity=0.256 Sum_probs=68.2
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 214 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~ 214 (343)
..++++|.+|.||..... + .+...+++.+.++++.+.|++ ++++++|. |....
T Consensus 64 ~pd~v~i~~G~ND~~~~~------------~----~~~~~~~l~~li~~~~~~~~~-vil~~~~~----~~~~~------ 116 (177)
T cd01822 64 KPDLVILELGGNDGLRGI------------P----PDQTRANLRQMIETAQARGAP-VLLVGMQA----PPNYG------ 116 (177)
T ss_pred CCCEEEEeccCcccccCC------------C----HHHHHHHHHHHHHHHHHCCCe-EEEEecCC----CCccc------
Confidence 457999999999975321 1 234567788888888888776 66666531 11100
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCC
Q 019279 215 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLC 294 (343)
Q Consensus 215 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C 294 (343)
....+.+|+.+++.. +++ ++.++|.+ +..+..+
T Consensus 117 ------~~~~~~~~~~~~~~a----~~~---~~~~~d~~--~~~~~~~-------------------------------- 149 (177)
T cd01822 117 ------PRYTRRFAAIYPELA----EEY---GVPLVPFF--LEGVAGD-------------------------------- 149 (177)
T ss_pred ------hHHHHHHHHHHHHHH----HHc---CCcEechH--HhhhhhC--------------------------------
Confidence 012345666655544 332 35566753 1111111
Q ss_pred CCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 295 PNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 295 ~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
.+++.-|++|||++||++||+.+.+.
T Consensus 150 ---~~~~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 150 ---PELMQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred ---hhhhCCCCCCcCHHHHHHHHHHHHHh
Confidence 12355799999999999999999874
No 30
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.22 E-value=1.4e-10 Score=97.61 Aligned_cols=116 Identities=17% Similarity=0.264 Sum_probs=84.2
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGA-RRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Ga-r~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
+.++++|.+|+||+.... + ++...+++.+.|+++.+... .+|+++++||....+
T Consensus 40 ~pd~vvi~~G~ND~~~~~------------~----~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~--------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLNR------------D----PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS--------- 94 (157)
T ss_pred CCCEEEEeccCcccccCC------------C----HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc---------
Confidence 568999999999996321 1 24456777788888877643 246667766643211
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
.+...+.||+.+++.+++.+.. +..+.++|+++.+.+
T Consensus 95 ------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~----------------------------------- 131 (157)
T cd01833 95 ------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT----------------------------------- 131 (157)
T ss_pred ------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC-----------------------------------
Confidence 1466789999999998886543 567899999876431
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
+++.+|++|||++||+.||+.+++.
T Consensus 132 -----~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 -----ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred -----cccccCCCCCchHHHHHHHHHHHhh
Confidence 1256899999999999999999874
No 31
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=99.10 E-value=3e-09 Score=97.63 Aligned_cols=149 Identities=17% Similarity=0.165 Sum_probs=89.3
Q ss_pred CcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCc--EEEEeCCCCCCCc-cc-------
Q 019279 136 GALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGAR--RVLVTGTGPLGCV-PA------- 205 (343)
Q Consensus 136 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar--~~vv~~lpplg~~-P~------- 205 (343)
..+++|++|+||.....- ......+ +++--+++.+.|+.|.+...+ +|+++++|++..+ |.
T Consensus 123 P~lVtI~lGgND~C~g~~-----d~~~~tp----~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hp 193 (305)
T cd01826 123 PALVIYSMIGNDVCNGPN-----DTINHTT----PEEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHP 193 (305)
T ss_pred CeEEEEEeccchhhcCCC-----ccccCcC----HHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhcccccc
Confidence 488899999999975311 1111223 344577888889999888744 8999999995322 11
Q ss_pred -cc-----------cccC--CCCCch------HHHHHHHHHHHHHHHHHHHHHHhh--cCCceEEEEcchHHHHHHHhCC
Q 019279 206 -ER-----------AMRG--RNGQCA------ADLQRAADLYNPQLVQLVKDLNSQ--YGSEIFVAVNTGKMQYNFISNP 263 (343)
Q Consensus 206 -~~-----------~~~~--~~~~~~------~~~~~~~~~~N~~L~~~l~~l~~~--~~~~~i~~~D~~~~~~~i~~np 263 (343)
.. .... ....|. +...++...+-++|..+..++.++ +....+.|.|+. +..++...
T Consensus 194 lg~~~~~vty~~~y~~lncl~~spC~gw~~~n~t~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~~~ 271 (305)
T cd01826 194 IGQLNKDVTYPNLYDYLNCLQVSPCWGWLNSNETLRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVDMW 271 (305)
T ss_pred chhcccccchhhhhhhhcccccCCccccccccccchhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhhHH
Confidence 00 0000 011332 334455555555666666665543 345677777763 44444433
Q ss_pred cCCCCccccccccCCCCCCCCccCCCCCCCCCCCCCceE-eCCCChhHHHHHHHHHHHHc
Q 019279 264 RAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAF-WDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 264 ~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C~~p~~ylf-wD~vHPT~~~h~~iA~~~~~ 322 (343)
.+.|- .+.+++. .|++||++.||.++|+.++.
T Consensus 272 ~~~g~---------------------------~~~~~i~~~DgfHpsq~g~~l~a~~lW~ 304 (305)
T cd01826 272 IAFGG---------------------------QTWQLIEPVDGFHPSQIANALLAEVFWK 304 (305)
T ss_pred HhcCC---------------------------CchhhcccccCCCccHHHHHHHHHHhhc
Confidence 33321 1224555 69999999999999999875
No 32
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.99 E-value=6.7e-09 Score=88.75 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=67.2
Q ss_pred CcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCccccccccCCCC
Q 019279 136 GALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGA-RRVLVTGTGPLGCVPAERAMRGRNG 214 (343)
Q Consensus 136 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Ga-r~~vv~~lpplg~~P~~~~~~~~~~ 214 (343)
..+++|.+|+||+.... ..+ .+....++.+.|+++.+... .+|+++..|... ...
T Consensus 56 pd~vii~~G~ND~~~~~----------~~~----~~~~~~~~~~li~~i~~~~p~~~i~~~~~~~~~------~~~---- 111 (169)
T cd01831 56 PDLVVINLGTNDFSTGN----------NPP----GEDFTNAYVEFIEELRKRYPDAPIVLMLGPMLF------GPY---- 111 (169)
T ss_pred CCEEEEECCcCCCCCCC----------CCC----HHHHHHHHHHHHHHHHHHCCCCeEEEEecCccc------ccc----
Confidence 47899999999985311 011 34567788888888887663 356665543321 000
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCC
Q 019279 215 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLC 294 (343)
Q Consensus 215 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C 294 (343)
.. + .+++.+++.+++. .+.++.++|.+..+.
T Consensus 112 ---~~-~----~~~~~~~~~~~~~----~~~~v~~id~~~~~~------------------------------------- 142 (169)
T cd01831 112 ---GT-E----EEIKRVAEAFKDQ----KSKKVHYFDTPGILQ------------------------------------- 142 (169)
T ss_pred ---cc-H----HHHHHHHHHHHhc----CCceEEEEecccccC-------------------------------------
Confidence 00 2 2223333333332 224788899765311
Q ss_pred CCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 295 PNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 295 ~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
+ . ++.|++||+++||++||+.+++.
T Consensus 143 --~-~-~~~DgiHPn~~G~~~iA~~l~~~ 167 (169)
T cd01831 143 --H-N-DIGCDWHPTVAGHQKIAKHLLPA 167 (169)
T ss_pred --C-C-CcCCCCCCCHHHHHHHHHHHHHH
Confidence 0 1 35799999999999999999874
No 33
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.99 E-value=5.2e-09 Score=89.46 Aligned_cols=119 Identities=13% Similarity=0.169 Sum_probs=77.9
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGA-RRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Ga-r~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
..++++|.+|+||+.... + .+...+++.+.++++.+.+. .+++++.+||.. ..
T Consensus 50 ~p~~vvi~~G~ND~~~~~------------~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~~-----~~----- 103 (171)
T cd04502 50 QPRRVVLYAGDNDLASGR------------T----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPSP-----AR----- 103 (171)
T ss_pred CCCEEEEEEecCcccCCC------------C----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCCC-----cc-----
Confidence 457999999999985311 1 35567888888888887753 357777765421 10
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
+..+.....+|+.+++..++ . -.+.++|++..+.+.-.+
T Consensus 104 ----~~~~~~~~~~n~~~~~~a~~----~--~~v~~vD~~~~~~~~~~~------------------------------- 142 (171)
T cd04502 104 ----WALRPKIRRFNALLKELAET----R--PNLTYIDVASPMLDADGK------------------------------- 142 (171)
T ss_pred ----hhhHHHHHHHHHHHHHHHhc----C--CCeEEEECcHHHhCCCCC-------------------------------
Confidence 11233456777777665432 1 257889999876521000
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
...+++..|++|||++||+++|+.+.+
T Consensus 143 --~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 143 --PRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred --cChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 001445689999999999999999875
No 34
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=98.95 E-value=7.4e-09 Score=89.38 Aligned_cols=139 Identities=15% Similarity=0.178 Sum_probs=94.1
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLG-ARRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~G-ar~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
...+++|++|+||-... .. .+.......++ -++++++.++-|...- -.+|++++.||+...-.........
T Consensus 68 ~p~lvtVffGaNDs~l~--~~--~~~~~hvPl~E----y~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e~~ 139 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLP--EP--SSLGQHVPLEE----YKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQEPY 139 (245)
T ss_pred CceEEEEEecCccccCC--CC--CCCCCccCHHH----HHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhccch
Confidence 56899999999998631 11 11111223344 4777888888777665 4578999999887654443332111
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCC
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL 293 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~ 293 (343)
....++.|+.+..|++.+.+..+++ ++..+|..+.+++.-
T Consensus 140 ~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~~--------------------------------- 179 (245)
T KOG3035|consen 140 VLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQESD--------------------------------- 179 (245)
T ss_pred hccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhcc---------------------------------
Confidence 1223468999999999988877765 566789888776411
Q ss_pred CCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 294 CPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 294 C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
|..+-.|||++|.|..|++++.++++..
T Consensus 180 --dw~~~~ltDGLHlS~~G~~ivf~Ei~kv 207 (245)
T KOG3035|consen 180 --DWQTSCLTDGLHLSPKGNKIVFDEILKV 207 (245)
T ss_pred --cHHHHHhccceeeccccchhhHHHHHHH
Confidence 1122367999999999999999999874
No 35
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.93 E-value=7.8e-09 Score=90.51 Aligned_cols=139 Identities=12% Similarity=0.011 Sum_probs=84.7
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 214 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~ 214 (343)
+.++++|.+|+||++..... +.......+++.+...+++...++++.+.|++ ++++++||+..
T Consensus 59 ~pd~vii~~G~ND~~~~~~~----~~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~------------ 121 (200)
T cd01829 59 KPDVVVVFLGANDRQDIRDG----DGYLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS------------ 121 (200)
T ss_pred CCCEEEEEecCCCCccccCC----CceeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC------------
Confidence 45889999999999742211 00011112345566677788888887777775 78888887641
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCC
Q 019279 215 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLC 294 (343)
Q Consensus 215 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C 294 (343)
...++....+|+.+++..++ + .+.++|++..+.+ + ..|+.... ....
T Consensus 122 ---~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~~----~---------~~~~~~~~----------~~~~ 168 (200)
T cd01829 122 ---PKLSADMVYLNSLYREEVAK----A---GGEFVDVWDGFVD----E---------NGRFTYSG----------TDVN 168 (200)
T ss_pred ---hhHhHHHHHHHHHHHHHHHH----c---CCEEEEhhHhhcC----C---------CCCeeeec----------cCCC
Confidence 12234556777777665543 2 4788999987632 0 11221100 0011
Q ss_pred CCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 295 PNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 295 ~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
.++..++..|++|||++||++||+.+++.
T Consensus 169 ~~~~~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 169 GKKVRLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred CcEEEeecCCCceECHHHHHHHHHHHHHH
Confidence 12224556799999999999999999875
No 36
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.49 E-value=8e-07 Score=74.48 Aligned_cols=100 Identities=18% Similarity=0.195 Sum_probs=63.2
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 214 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~ 214 (343)
...+++|.+|+||.. + .+++.+.++.+ ..+ ++++++++++ |.
T Consensus 50 ~~d~vvi~lGtNd~~--~---------------------~~nl~~ii~~~-~~~-~~ivlv~~~~----~~--------- 91 (150)
T cd01840 50 LRKTVVIGLGTNGPF--T---------------------KDQLDELLDAL-GPD-RQVYLVNPHV----PR--------- 91 (150)
T ss_pred CCCeEEEEecCCCCC--C---------------------HHHHHHHHHHc-CCC-CEEEEEECCC----Cc---------
Confidence 457889999999973 1 12333344444 223 5788877652 11
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCCCCCC
Q 019279 215 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLC 294 (343)
Q Consensus 215 ~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C 294 (343)
...+.+|+.+ +++.++++ ++.++|.+..+.+ +|
T Consensus 92 -------~~~~~~n~~~----~~~a~~~~--~v~~id~~~~~~~---~~------------------------------- 124 (150)
T cd01840 92 -------PWEPDVNAYL----LDAAKKYK--NVTIIDWYKAAKG---HP------------------------------- 124 (150)
T ss_pred -------chHHHHHHHH----HHHHHHCC--CcEEecHHHHhcc---cc-------------------------------
Confidence 0124555555 45556666 4667888765431 11
Q ss_pred CCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 295 PNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 295 ~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
+++..|++||+++||+++|+.+.+.
T Consensus 125 ----~~~~~DgiHpn~~G~~~~a~~i~~a 149 (150)
T cd01840 125 ----DWFYGDGVHPNPAGAKLYAALIAKA 149 (150)
T ss_pred ----hhhcCCCCCCChhhHHHHHHHHHHh
Confidence 3455799999999999999998763
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=98.46 E-value=3.6e-06 Score=74.56 Aligned_cols=24 Identities=13% Similarity=0.152 Sum_probs=21.0
Q ss_pred eEeCCCChhHHHHHHHHHHHHcCC
Q 019279 301 AFWDPFHPSERANGFIVQEFMTGS 324 (343)
Q Consensus 301 lfwD~vHPT~~~h~~iA~~~~~~~ 324 (343)
+.+|++||+.+||+.||+.+.+..
T Consensus 185 ~~~Dg~H~n~~Gy~~~a~~l~~~l 208 (216)
T COG2755 185 LTEDGLHPNAKGYQALAEALAEVL 208 (216)
T ss_pred ccCCCCCcCHhhHHHHHHHHHHHH
Confidence 348999999999999999998753
No 38
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=98.30 E-value=3e-06 Score=72.53 Aligned_cols=166 Identities=13% Similarity=0.230 Sum_probs=76.1
Q ss_pred CEEEEcCCcccccCCCCCcccccCCCCCCCCCCCCCCCCcccCCCCCchhhhhh--------hhhhcCccccCCCCCCcc
Q 019279 31 RAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFIT--------NFASAGIGILNDTGIQFV 102 (343)
Q Consensus 31 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~P~g~~~~~~~~~GrfsnG~~~~d~la--------NyA~gGA~~~~~~~~~~~ 102 (343)
+.+++.|+|+|-.+... +-|..|+-.++ |++++|+.-+
T Consensus 2 k~~v~YGsSItqG~~As--------------------------rpg~~~~~~~aR~l~~~~iNLGfsG~~~l-------- 47 (178)
T PF14606_consen 2 KRWVAYGSSITQGACAS--------------------------RPGMAYPAILARRLGLDVINLGFSGNGKL-------- 47 (178)
T ss_dssp -EEEEEE-TT-TTTT-S--------------------------SGGGSHHHHHHHHHT-EEEEEE-TCCCS---------
T ss_pred CeEEEECChhhcCCCCC--------------------------CCcccHHHHHHHHcCCCeEeeeecCcccc--------
Confidence 46889999988776631 12356777777 9999998732
Q ss_pred cccCHHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHH
Q 019279 103 NIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLT 182 (343)
Q Consensus 103 ~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~ 182 (343)
+..+..++. . ...++|++..|.| . . .++ +..++...|+
T Consensus 48 -----e~~~a~~ia---------------~-~~a~~~~ld~~~N--~----~-----------~~~----~~~~~~~fv~ 85 (178)
T PF14606_consen 48 -----EPEVADLIA---------------E-IDADLIVLDCGPN--M----S-----------PEE----FRERLDGFVK 85 (178)
T ss_dssp ------HHHHHHHH---------------H-S--SEEEEEESHH--C----C-----------TTT----HHHHHHHHHH
T ss_pred -----CHHHHHHHh---------------c-CCCCEEEEEeecC--C----C-----------HHH----HHHHHHHHHH
Confidence 223333322 1 2459999999999 1 1 112 3455666777
Q ss_pred HHHHcC-CcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHh
Q 019279 183 RLYDLG-ARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFIS 261 (343)
Q Consensus 183 ~L~~~G-ar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~ 261 (343)
+|.+.- -.-|+++....-.. . ..........+.+|+.+++.+++++++ .+-++.|+|-..++-+-
T Consensus 86 ~iR~~hP~tPIllv~~~~~~~--~---------~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~d-- 151 (178)
T PF14606_consen 86 TIREAHPDTPILLVSPIPYPA--G---------YFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGDD-- 151 (178)
T ss_dssp HHHTT-SSS-EEEEE----TT--T---------TS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS-----
T ss_pred HHHHhCCCCCEEEEecCCccc--c---------ccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCcc--
Confidence 776654 55677766432111 1 112233456778999999999999753 34578889887764220
Q ss_pred CCcCCCCccccccccCCCCCCCCccCCCCCCCCCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 019279 262 NPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTG 323 (343)
Q Consensus 262 np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~ 323 (343)
.-...|++|||..||..+|+.+...
T Consensus 152 -------------------------------------~e~tvDgvHP~DlG~~~~a~~l~~~ 176 (178)
T PF14606_consen 152 -------------------------------------HEATVDGVHPNDLGMMRMADALEPV 176 (178)
T ss_dssp --------------------------------------------------------------
T ss_pred -------------------------------------ccccccccccccccccccccccccc
Confidence 1134699999999999999987653
No 39
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=98.18 E-value=2.9e-05 Score=73.32 Aligned_cols=148 Identities=20% Similarity=0.147 Sum_probs=77.0
Q ss_pred cCCCEEEEcCCcccccCCCCCcccccCCCCCCC-CCCCCCCCCcccCCCCCchhhhhh-------------hhhhcCccc
Q 019279 28 EAARAFFVFGDSLVDNGNNNYLATTARADSPPY-GIDYPTRRPTGRFSNGLNIPDFIT-------------NFASAGIGI 93 (343)
Q Consensus 28 ~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~P~-g~~~~~~~~~GrfsnG~~~~d~la-------------NyA~gGA~~ 93 (343)
..+.-|=++|||++ +|+........ ...+| |..|+ .| +-..|-+++. ++..|+.++
T Consensus 73 ~dI~vIgAmGDSLt-~G~ga~~~~~~--~~~e~rG~sF~----~G---gd~~ld~~vTipNIlr~f~p~l~g~s~g~~s~ 142 (397)
T KOG3670|consen 73 EDIKVIGAMGDSLT-NGAGAWPGNLA--VILEFRGLSFQ----IG---GDANLDEHVTIPNILRKFNPKLYGKSFGIGSV 142 (397)
T ss_pred ccceeeeeccchhh-ccCCCCCcchh--hheecCcceec----cC---CchhhhcceeehhHHhhhCcccccccccCCcc
Confidence 35788999999999 66643111110 00111 33332 22 1133444444 444555543
Q ss_pred cCCCCCCc------ccccCHHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhhcCccCccCCCCChh
Q 019279 94 LNDTGIQF------VNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLP 167 (343)
Q Consensus 94 ~~~~~~~~------~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~ 167 (343)
..-....+ ....+|-.|-+...+..++ ..+-+ -...--|+.||||+||+-..-. +. .+.+
T Consensus 143 ~~~~~s~lNvA~~Ga~s~Dlp~QAr~Lv~rik~---~~~i~---~~~dWKLi~IfIG~ND~c~~c~-----~~---~~~~ 208 (397)
T KOG3670|consen 143 NVLRNSQLNVAEPGAESEDLPDQARDLVSRIKK---DKEIN---MKNDWKLITIFIGTNDLCAYCE-----GP---ETPP 208 (397)
T ss_pred ccccccccccccccccchhhHHHHHHHHHHHHh---ccCcc---cccceEEEEEEeccchhhhhcc-----CC---CCCC
Confidence 22122111 1134677777765554433 21111 1124578999999999985321 11 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEEe-CCCC
Q 019279 168 DYVKYVISEYRKLLTRLYDLGARRVLVT-GTGP 199 (343)
Q Consensus 168 ~~v~~~v~~~~~~l~~L~~~Gar~~vv~-~lpp 199 (343)
..++.-..+|.++++.|.+.=-|.+|++ ++++
T Consensus 209 ~~~~~~~~~i~~Al~~L~~nvPR~iV~lvg~~~ 241 (397)
T KOG3670|consen 209 SPVDQHKRNIRKALEILRDNVPRTIVSLVGMFN 241 (397)
T ss_pred CchhHHHHHHHHHHHHHHhcCCceEEEEecCCC
Confidence 3344456778899999998888876544 4443
No 40
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.28 E-value=0.0048 Score=57.03 Aligned_cols=135 Identities=16% Similarity=0.162 Sum_probs=79.8
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCCCCCCccccccccC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDL---GARRVLVTGTGPLGCVPAERAMRG 211 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~---Gar~~vv~~lpplg~~P~~~~~~~ 211 (343)
+-+.++|.+|.||.+. +... +......-.+. ...+.+-+.+|.+. ---+++.+++|+.-
T Consensus 177 ~~a~vVV~lGaND~q~-~~~g---d~~~kf~S~~W----~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r---------- 238 (354)
T COG2845 177 KPAAVVVMLGANDRQD-FKVG---DVYEKFRSDEW----TKEYEKRVDAILKIAHTHKVPVLWVGMPPFR---------- 238 (354)
T ss_pred CccEEEEEecCCCHHh-cccC---CeeeecCchHH----HHHHHHHHHHHHHHhcccCCcEEEeeCCCcc----------
Confidence 4577889999999985 4331 11111111222 33344444444332 23368889998742
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhC-CcCCCCccccccccCCCCCCCCccCCCC
Q 019279 212 RNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISN-PRAFGFTTSKVACCGQGPYNGLGLCTPA 290 (343)
Q Consensus 212 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~n-p~~yGf~~~~~~Cc~~~~~~~~~~c~~~ 290 (343)
.+.+++-...+|...++.++++. .++ +|+++.+-+.-.+ ...+|++ .|
T Consensus 239 -----~~~l~~dm~~ln~iy~~~vE~~~-----gk~--i~i~d~~v~e~G~~f~~~~~D-----------~N-------- 287 (354)
T COG2845 239 -----KKKLNADMVYLNKIYSKAVEKLG-----GKF--IDIWDGFVDEGGKDFVTTGVD-----------IN-------- 287 (354)
T ss_pred -----ccccchHHHHHHHHHHHHHHHhC-----CeE--EEecccccccCCceeEEeccc-----------cC--------
Confidence 34677788899999999988873 243 5666544322111 1122221 01
Q ss_pred CCCCCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 291 SNLCPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 291 ~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
..|-++.-=|++|.|.+|.+.+|.++.+
T Consensus 288 ----Gq~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 288 ----GQPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred ----CceEEEeccCCceechhhHHHHHHHHHH
Confidence 1223455569999999999999999875
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.97 E-value=0.19 Score=42.95 Aligned_cols=125 Identities=14% Similarity=0.066 Sum_probs=70.1
Q ss_pred CcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHH---HcCCcEEEEeCCCCCC--Ccccccccc
Q 019279 136 GALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLY---DLGARRVLVTGTGPLG--CVPAERAMR 210 (343)
Q Consensus 136 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~---~~Gar~~vv~~lpplg--~~P~~~~~~ 210 (343)
-+++.|.-|..|+-. |. . ...+++ ..++.+.+.+|. ..++. +|..+.+|++ +...+....
T Consensus 51 ~DVIi~Ns~LWDl~r-y~------~---~~~~~Y----~~NL~~Lf~rLk~~lp~~al-lIW~tt~Pv~~~~~ggfl~~~ 115 (183)
T cd01842 51 LDLVIMNSCLWDLSR-YQ------R---NSMKTY----RENLERLFSKLDSVLPIECL-IVWNTAMPVAEEIKGGFLLPE 115 (183)
T ss_pred eeEEEEecceecccc-cC------C---CCHHHH----HHHHHHHHHHHHhhCCCccE-EEEecCCCCCcCCcCceeccc
Confidence 478888999999863 31 1 123333 333333333333 45654 4444555543 222111110
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCCCCccCCCC
Q 019279 211 GRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPA 290 (343)
Q Consensus 211 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~~~~~c~~~ 290 (343)
...+...+..-+..+|..-+..+++ + .|-+.|+|..|.....
T Consensus 116 --~~~~~~~lr~dv~eaN~~A~~va~~----~---~~dVlDLh~~fr~~~~----------------------------- 157 (183)
T cd01842 116 --LHDLSKSLRYDVLEGNFYSATLAKC----Y---GFDVLDLHYHFRHAMQ----------------------------- 157 (183)
T ss_pred --cccccccchhHHHHHHHHHHHHHHH----c---CceeeehHHHHHhHHh-----------------------------
Confidence 0123344556677888655554333 2 5777899988732111
Q ss_pred CCCCCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 291 SNLCPNRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 291 ~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
+--.|++|.++.+|+.|++.+++
T Consensus 158 ---------~~~~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 158 ---------HRVRDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred ---------hcCCCCcCcCHHHHHHHHHHHHH
Confidence 12259999999999999999876
No 42
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=93.62 E-value=0.34 Score=44.06 Aligned_cols=140 Identities=13% Similarity=0.148 Sum_probs=84.4
Q ss_pred ccCcEEEEEeccchhhhhhhcCcc-Cc--cCC--CCChhH------HHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCC
Q 019279 134 VNGALILITVGGNDFVNNYYLVPY-SA--RSR--QFSLPD------YVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGC 202 (343)
Q Consensus 134 ~~~sL~~i~iG~ND~~~~~~~~~~-~~--~~~--~~~~~~------~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~ 202 (343)
.+-++++|..|..=.+..-..... .+ ... ..+... -++++++.+...++.|....-+-=+|+++.|+..
T Consensus 100 ~~ad~~iiTLGtaevw~~~~~g~vv~nc~k~p~~~F~~~~~~f~~ls~~ei~~~l~~~~~~l~~~nP~~kiilTVSPVrl 179 (251)
T PF08885_consen 100 EEADVFIITLGTAEVWRDRETGRVVANCHKVPAGQFDPERYEFRNLSVEEILEDLEAIIDLLRSINPDIKIILTVSPVRL 179 (251)
T ss_pred HhCCEEEEeCCcHHHheeCCCCEEEecCCCccccccchhhhhhccCCHHHHHHHHHHHHHHHHhhCCCceEEEEeccchh
Confidence 456888999999988743211000 00 000 111111 2577888888888888888766556778888643
Q ss_pred ccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHhCCcCCCCccccccccCCCCCC
Q 019279 203 VPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYN 282 (343)
Q Consensus 203 ~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~np~~yGf~~~~~~Cc~~~~~~ 282 (343)
..+... .-.-..|..++ ..|+..+.++.++++ ++.||-.|.++.+-++++.-
T Consensus 180 ---~~T~~~---~d~~~an~~SK---s~Lr~a~~~l~~~~~--~v~YFPSYEiv~d~lrdyrf----------------- 231 (251)
T PF08885_consen 180 ---IATFRD---RDGLVANQYSK---STLRAAAHELVRAFD--DVDYFPSYEIVMDELRDYRF----------------- 231 (251)
T ss_pred ---hccccc---ccchhhhhhhH---HHHHHHHHHHHhcCC--CceEcchHhhccCccccccc-----------------
Confidence 332211 11122233332 567888888887654 78899999998754443211
Q ss_pred CCccCCCCCCCCCCCCCceEeCCCChhHHHHHHHHHH
Q 019279 283 GLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQE 319 (343)
Q Consensus 283 ~~~~c~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~ 319 (343)
+=-|-+||++.+-..|.+.
T Consensus 232 ------------------y~~D~~Hps~~aV~~I~~~ 250 (251)
T PF08885_consen 232 ------------------YAEDMRHPSPQAVDYIWER 250 (251)
T ss_pred ------------------ccccCCCCCHHHHHHHHhh
Confidence 1138999999998887664
No 43
>PLN02757 sirohydrochlorine ferrochelatase
Probab=82.61 E-value=4 Score=34.23 Aligned_cols=62 Identities=13% Similarity=0.223 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEc---ch
Q 019279 177 YRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVN---TG 253 (343)
Q Consensus 177 ~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D---~~ 253 (343)
+.+.|++|.+.|+++|+|+ |++.... ......+.+.++++++++|+.+|.+.. .+
T Consensus 60 l~eal~~l~~~g~~~vvVv--------P~FL~~G--------------~H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~~ 117 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIVS--------PFFLSPG--------------RHWQEDIPALTAEAAKEHPGVKYLVTAPIGLH 117 (154)
T ss_pred HHHHHHHHHHCCCCEEEEE--------EhhhcCC--------------cchHhHHHHHHHHHHHHCCCcEEEECCCCCCC
Confidence 4456678888999999984 6666543 112355788888999999999988754 44
Q ss_pred HHHHHHH
Q 019279 254 KMQYNFI 260 (343)
Q Consensus 254 ~~~~~i~ 260 (343)
..+.+++
T Consensus 118 p~l~~ll 124 (154)
T PLN02757 118 ELMVDVV 124 (154)
T ss_pred HHHHHHH
Confidence 4555554
No 44
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=76.09 E-value=6.8 Score=29.88 Aligned_cols=52 Identities=13% Similarity=0.079 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEc
Q 019279 178 RKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVN 251 (343)
Q Consensus 178 ~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D 251 (343)
.+.+++|.+.|+++++|+ |.+.... ....+.+.+.++++++++|+.++.+.+
T Consensus 47 ~~~l~~l~~~g~~~v~vv--------Plfl~~G--------------~h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 47 AEALDELAAQGATRIVVV--------PLFLLAG--------------GHVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHHcCCCEEEEE--------eeEeCCC--------------ccccccHHHHHHHHHHHCCCeEEEecC
Confidence 345677888999999885 5555432 112245667777777788988887754
No 45
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=71.65 E-value=18 Score=32.38 Aligned_cols=84 Identities=18% Similarity=0.223 Sum_probs=49.4
Q ss_pred EEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHH
Q 019279 140 LITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAAD 219 (343)
Q Consensus 140 ~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~ 219 (343)
.|+.|.+.....|. ++ ..... +...+-+.+.++.|...|.|+|+|+|-- ++
T Consensus 61 ~i~yG~s~~h~~fp-----GT-isl~~----~t~~~~l~di~~sl~~~Gf~~ivivngH---------------gG---- 111 (237)
T PF02633_consen 61 PIPYGCSPHHMGFP-----GT-ISLSP----ETLIALLRDILRSLARHGFRRIVIVNGH---------------GG---- 111 (237)
T ss_dssp -B--BB-GCCTTST-----T--BBB-H----HHHHHHHHHHHHHHHHHT--EEEEEESS---------------TT----
T ss_pred CCccccCcccCCCC-----Ce-EEeCH----HHHHHHHHHHHHHHHHcCCCEEEEEECC---------------Hh----
Confidence 45889888865442 11 11122 2334446667788899999999998731 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHH
Q 019279 220 LQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNF 259 (343)
Q Consensus 220 ~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i 259 (343)
| ...|+..++++++++++.++.++|.+.+....
T Consensus 112 -N------~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 112 -N------IAALEAAARELRQEYPGVKVFVINWWQLAEDE 144 (237)
T ss_dssp -H------HHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCH
T ss_pred -H------HHHHHHHHHHHHhhCCCcEEEEeechhccchh
Confidence 1 13566777778877899999999998886543
No 46
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=68.64 E-value=5.9 Score=37.84 Aligned_cols=70 Identities=14% Similarity=0.114 Sum_probs=51.2
Q ss_pred ccCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccc
Q 019279 134 VNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAM 209 (343)
Q Consensus 134 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~ 209 (343)
..+.++.-|+|+||+...-. +..+...-.-+......+.+++..++..+.-+||..+.|.++..|.....
T Consensus 97 ~~~~~~~~~a~gnd~A~gga------~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~ 166 (370)
T COG3240 97 DPNGLYIHWAGGNDLAVGGA------RSTEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYF 166 (370)
T ss_pred CcccccCcccccccHhhhcc------ccccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHH
Confidence 46788889999999986432 22111101223445667788899999999999999999999999988764
No 47
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=67.84 E-value=4.8 Score=30.91 Aligned_cols=53 Identities=17% Similarity=0.100 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcch
Q 019279 179 KLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTG 253 (343)
Q Consensus 179 ~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 253 (343)
+.+++|.+.|+++|+|+ |.+.... ....+.+.+.+++++..+|+.++.+...-
T Consensus 41 ~~l~~l~~~g~~~ivvv--------P~fL~~G--------------~h~~~DIp~~l~~~~~~~~~~~v~~~~pL 93 (105)
T PF01903_consen 41 EALERLVAQGARRIVVV--------PYFLFPG--------------YHVKRDIPEALAEARERHPGIEVRVAPPL 93 (105)
T ss_dssp HCCHHHHCCTCSEEEEE--------EESSSSS--------------HHHHCHHHHHHCHHHHCSTTEEEEE---G
T ss_pred HHHHHHHHcCCCeEEEE--------eeeecCc--------------cchHhHHHHHHHHHHhhCCceEEEECCCC
Confidence 35578888999999885 6666432 11123477888899999999998886543
No 48
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=67.19 E-value=22 Score=33.26 Aligned_cols=61 Identities=11% Similarity=0.151 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 019279 171 KYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIF 247 (343)
Q Consensus 171 ~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 247 (343)
...++.+.+.++++.++|.+.|+++++|.. .-+.-. +..+. |..+.+.+..+++++|+.-|
T Consensus 47 r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~gs----------~A~~~-----~g~v~~air~iK~~~p~l~v 107 (314)
T cd00384 47 RLSVDSLVEEAEELADLGIRAVILFGIPEH-KDEIGS----------EAYDP-----DGIVQRAIRAIKEAVPELVV 107 (314)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCcc----------cccCC-----CChHHHHHHHHHHhCCCcEE
Confidence 345778888999999999999999999643 211111 11111 24567788888888887543
No 49
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=67.17 E-value=56 Score=29.09 Aligned_cols=149 Identities=13% Similarity=0.102 Sum_probs=77.8
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCC--cEEEEeCCCCCCCccccccccCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGA--RRVLVTGTGPLGCVPAERAMRGR 212 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Ga--r~~vv~~lpplg~~P~~~~~~~~ 212 (343)
..++++|..|..+.-....... +........+.....+..+...+.++..... .++++.+++|...- .... ..
T Consensus 100 ~pdvvV~nsG~W~~~~~~~~~~--~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~~--~~~~-~~ 174 (263)
T PF13839_consen 100 RPDVVVINSGLWYLRRSGFIEW--GDNKEINPLEAYRNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHFE--GGDW-NS 174 (263)
T ss_pred CCCEEEEEcchhhhhcchhccc--CCCcCcchHHHHHHHHHHHHHHHHhhhccccccceEEEEecCCcccc--cccc-cc
Confidence 6899999999999854221100 0001111223334455556666666665554 67777777664321 1100 01
Q ss_pred CCCch-----HHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcchHHHHHHHh---CCcCCCCccccccccCCCCCCCC
Q 019279 213 NGQCA-----ADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFIS---NPRAFGFTTSKVACCGQGPYNGL 284 (343)
Q Consensus 213 ~~~~~-----~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~---np~~yGf~~~~~~Cc~~~~~~~~ 284 (343)
.+.|. ...+.....+|+.+.+.+ ..+.++.++|+...+..... +|+.|+-...
T Consensus 175 gg~c~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ldi~~~~~~~r~~d~H~~~~~~~~~------------- 235 (263)
T PF13839_consen 175 GGSCNPPRREEITNEQIDELNEALREAL------KKNSRVHLLDIFTMLSSFRPDDAHPGIYRNQWP------------- 235 (263)
T ss_pred CCCcCcccccCCCHHHHHHHHHHHHHHh------hcCCCceeeeecchhhhccccccCcccccCCCC-------------
Confidence 22333 233445556666655544 14567888999655444332 3555431110
Q ss_pred ccCCCCCCCCCCCCCceEeCCCC-hhHHHHHHHHHHHHc
Q 019279 285 GLCTPASNLCPNRAVYAFWDPFH-PSERANGFIVQEFMT 322 (343)
Q Consensus 285 ~~c~~~~~~C~~p~~ylfwD~vH-PT~~~h~~iA~~~~~ 322 (343)
.-.-|++| +.+.+.+...+.+++
T Consensus 236 ---------------~~~~Dc~Hw~~p~v~d~~~~lL~~ 259 (263)
T PF13839_consen 236 ---------------RQPQDCLHWCLPGVIDTWNELLLN 259 (263)
T ss_pred ---------------CCCCCCcCcCCCcHHHHHHHHHHH
Confidence 00248999 777777766666554
No 50
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=63.19 E-value=27 Score=32.72 Aligned_cols=61 Identities=20% Similarity=0.249 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 019279 171 KYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIF 247 (343)
Q Consensus 171 ~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 247 (343)
...++.+.+.++++.++|.+.|+++++|+. .-+.-. +..+. |..+.+.+..+++++|+.-|
T Consensus 57 r~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~gs----------~A~~~-----~g~v~~air~iK~~~pdl~v 117 (322)
T PRK13384 57 RLPESALADEIERLYALGIRYVMPFGISHH-KDAKGS----------DTWDD-----NGLLARMVRTIKAAVPEMMV 117 (322)
T ss_pred eECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCCcc----------cccCC-----CChHHHHHHHHHHHCCCeEE
Confidence 334778888999999999999999999642 211111 11111 35667788888888887643
No 51
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=62.99 E-value=27 Score=32.86 Aligned_cols=61 Identities=11% Similarity=0.095 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 019279 171 KYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIF 247 (343)
Q Consensus 171 ~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 247 (343)
...++.+.+.++++.++|.+.|+++++|.. .-+.-. +..+. |..+.+.+..+++++|+.-|
T Consensus 55 r~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~gs----------~A~~~-----~g~v~rair~iK~~~p~l~v 115 (323)
T PRK09283 55 RLSIDLLVKEAEEAVELGIPAVALFGVPEL-KDEDGS----------EAYNP-----DGLVQRAIRAIKKAFPELGV 115 (323)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcccc----------cccCC-----CCHHHHHHHHHHHhCCCcEE
Confidence 344777888999999999999999999532 111111 11111 34567788888888887543
No 52
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=59.07 E-value=29 Score=32.65 Aligned_cols=61 Identities=16% Similarity=0.308 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 019279 173 VISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIF 247 (343)
Q Consensus 173 ~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 247 (343)
.++.+.+.++++.++|.+.|+++++.+ |..+...+ .+..+ =|..+.+.+..+++.+|+.-|
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~g-----s~a~~-----~~g~v~~air~iK~~~pdl~v 115 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEEG-----SEAYN-----PDGLVQRAIRAIKKAFPDLLV 115 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS------GGGGS-----TTSHHHHHHHHHHHHSTTSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcch-----hcccC-----CCChHHHHHHHHHHhCCCcEE
Confidence 367788889999999999999998832 22222211 11111 134567788888888998543
No 53
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=57.10 E-value=42 Score=26.16 Aligned_cols=50 Identities=32% Similarity=0.357 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEE
Q 019279 177 YRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAV 250 (343)
Q Consensus 177 ~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 250 (343)
+.+.+++|.+.|+++++|+ |.+.... ... +.+.+.+++++++ |+.++.+.
T Consensus 47 ~~~~l~~l~~~g~~~i~vv--------P~fL~~G--------------~h~-~~i~~~~~~~~~~-~~~~i~~~ 96 (117)
T cd03414 47 LPEALERLRALGARRVVVL--------PYLLFTG--------------VLM-DRIEEQVAELAAE-PGIEFVLA 96 (117)
T ss_pred HHHHHHHHHHcCCCEEEEE--------echhcCC--------------chH-HHHHHHHHHHHhC-CCceEEEC
Confidence 4456777888999999885 5555431 011 2355667777776 77777653
No 54
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=56.29 E-value=15 Score=34.45 Aligned_cols=61 Identities=16% Similarity=0.190 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCCCCC-Cccc-cccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCce
Q 019279 171 KYVISEYRKLLTRLYDLGARRVLVTGTGPLG-CVPA-ERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEI 246 (343)
Q Consensus 171 ~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg-~~P~-~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 246 (343)
...++.+.+.++++.++|.+.|+++++|+-. .-+. ... .. .=|..+.+.++.+++++|+.-
T Consensus 47 r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~gs~----------a~-----~~~g~v~~air~iK~~~pdl~ 109 (320)
T cd04824 47 RYGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRSGSA----------AD-----DEDGPVIQAIKLIREEFPELL 109 (320)
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCcccc----------cc-----CCCChHHHHHHHHHHhCCCcE
Confidence 3347788889999999999999999997532 2222 110 01 012455677788888888754
No 55
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=56.21 E-value=47 Score=31.19 Aligned_cols=62 Identities=13% Similarity=0.107 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCCC-CCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 019279 171 KYVISEYRKLLTRLYDLGARRVLVTGTGP-LGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIF 247 (343)
Q Consensus 171 ~~~v~~~~~~l~~L~~~Gar~~vv~~lpp-lg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 247 (343)
...++.+.+.++++.++|.+.|++++++| -..-+.-. +..+. |..+.+.+..+++++|+.-+
T Consensus 50 r~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~gs----------~A~~~-----~g~v~~air~iK~~~p~l~v 112 (320)
T cd04823 50 RLSIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDGS----------EAYNP-----DNLVCRAIRAIKEAFPELGI 112 (320)
T ss_pred eeCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCcccc----------cccCC-----CChHHHHHHHHHHhCCCcEE
Confidence 34578888899999999999999999853 11211111 11111 34567788888888887533
No 56
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=55.35 E-value=43 Score=26.89 Aligned_cols=51 Identities=18% Similarity=0.141 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEE
Q 019279 175 SEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAV 250 (343)
Q Consensus 175 ~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~ 250 (343)
..+.+.+++|.+.|.++|+|..+ +.... ..| ..|.+.+++++ +|..+|.+.
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~Pl--------~l~~G--------------~e~-~di~~~v~~~~--~~~~~i~~g 106 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQSL--------HIIPG--------------EEY-EKLKREVDAFK--KGFKKIKLG 106 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEeC--------eeECc--------------HHH-HHHHHHHHHHh--CCCceEEEc
Confidence 34667889999999999999643 33221 122 56666777776 566666654
No 57
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=50.24 E-value=27 Score=31.98 Aligned_cols=94 Identities=17% Similarity=0.225 Sum_probs=55.6
Q ss_pred ccCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCC
Q 019279 134 VNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRN 213 (343)
Q Consensus 134 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~ 213 (343)
.++=+|-++|--||--.. .....+....--++++++.+..|.+.|.|-++++++++ |......+
T Consensus 38 ~~nliyPlFI~e~~dd~~----------pI~SmPg~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~----~~~Kd~~g-- 101 (340)
T KOG2794|consen 38 PANLIYPLFIHEGEDDFT----------PIDSMPGIYRLGVNRLKEELAPLVAKGLRSVILFGVVP----EALKDPTG-- 101 (340)
T ss_pred hhheeeeEEEecCccccc----------ccccCCchhHHHHHHHHHHHHHHHHhccceEEEecCCC----ccccCccc--
Confidence 356677778877765311 01112222334477899999999999999999999974 22222111
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcc
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNT 252 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~ 252 (343)
. ....=|.-.-+.+..|++.+|+. +++.|+
T Consensus 102 -s-------~Ads~~gpvi~ai~~lr~~fPdL-~i~cDV 131 (340)
T KOG2794|consen 102 -S-------EADSDNGPVIRAIRLLRDRFPDL-VIACDV 131 (340)
T ss_pred -c-------cccCCCCcHHHHHHHHHHhCcce-EEEeee
Confidence 0 01111334456778888889986 334443
No 58
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=49.28 E-value=35 Score=29.34 Aligned_cols=56 Identities=20% Similarity=0.337 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 019279 168 DYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIF 247 (343)
Q Consensus 168 ~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 247 (343)
.-+..+-..+.+.|.+|++.|.+.|+.-+- +| +-..-.+.+.+|+++||+.++
T Consensus 22 ~~~~~ik~~L~~~i~~lie~G~~~fi~Gga--lG-------------------------~D~waae~vl~LK~~yp~ikL 74 (177)
T PF06908_consen 22 PKIQVIKKALKKQIIELIEEGVRWFITGGA--LG-------------------------VDLWAAEVVLELKKEYPEIKL 74 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--EEEE-----TT-------------------------HHHHHHHHHHTTTTT-TT-EE
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCEEEECCc--cc-------------------------HHHHHHHHHHHHHhhhhheEE
Confidence 346778888999999999999998887321 11 112335667777888888776
Q ss_pred EEE
Q 019279 248 VAV 250 (343)
Q Consensus 248 ~~~ 250 (343)
..+
T Consensus 75 ~~v 77 (177)
T PF06908_consen 75 ALV 77 (177)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 59
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=46.36 E-value=45 Score=27.10 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=39.6
Q ss_pred HHHHHHHHHhhcCCceEEEEcchHHHHHHHh---------------CCcCCCCccccccccCCCCCCCCccCCCCCCCCC
Q 019279 231 LVQLVKDLNSQYGSEIFVAVNTGKMQYNFIS---------------NPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCP 295 (343)
Q Consensus 231 L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~---------------np~~yGf~~~~~~Cc~~~~~~~~~~c~~~~~~C~ 295 (343)
|+-.|+.+++..-++-++...+++.+.+.+. --+++||.-..=.= +
T Consensus 38 l~l~L~~~k~~g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf~v~D~s~------------------~- 98 (130)
T PF04914_consen 38 LQLLLDVCKELGIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGFNVADFSD------------------D- 98 (130)
T ss_dssp HHHHHHHHHHTT-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT--EEE-TT------------------G-
T ss_pred HHHHHHHHHHcCCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEeccc------------------C-
Confidence 3556677766555566777788886665421 12356662211000 0
Q ss_pred CCCCceEeCCCChhHHHHHHHHHHHHc
Q 019279 296 NRAVYAFWDPFHPSERANGFIVQEFMT 322 (343)
Q Consensus 296 ~p~~ylfwD~vHPT~~~h~~iA~~~~~ 322 (343)
.-+.|++-|.+||..+|.-.+-+.|.+
T Consensus 99 ~y~~yfm~D~iHlgw~GWv~vd~~i~~ 125 (130)
T PF04914_consen 99 EYEPYFMQDTIHLGWKGWVYVDQAIYP 125 (130)
T ss_dssp TTSTTSBSSSSSB-THHHHHHHHHHHH
T ss_pred CCCCceeeecccCchhhHHHHHHHHHH
Confidence 123688999999999999888777654
No 60
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=45.95 E-value=33 Score=32.01 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 019279 171 KYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSE 245 (343)
Q Consensus 171 ~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 245 (343)
...++.+.+.++++.++|.+-|+++++|+-+ .+...+ ...-.-|..+++.++.+++.+|+.
T Consensus 57 r~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~g----------s~A~~~~givqravr~ik~~~p~l 117 (330)
T COG0113 57 RYSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDETG----------SEAYDPDGIVQRAVRAIKEAFPEL 117 (330)
T ss_pred eccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCccc----------ccccCCCChHHHHHHHHHHhCCCe
Confidence 4457888889999999999999999999632 111110 000011245677788888888854
No 61
>PRK13660 hypothetical protein; Provisional
Probab=43.44 E-value=94 Score=26.84 Aligned_cols=55 Identities=22% Similarity=0.439 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEE
Q 019279 170 VKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVA 249 (343)
Q Consensus 170 v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 249 (343)
+..+-..+++.|.++++.|.+.|++-+- +| +-..-.+.+.+|++++|+.++..
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gga--lG-------------------------~d~wAaEvvl~LK~~yp~lkL~~ 76 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISGQ--LG-------------------------VELWAAEVVLELKEEYPDLKLAV 76 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECCc--ch-------------------------HHHHHHHHHHHHHhhCCCeEEEE
Confidence 5566778889999999999998887431 11 11233567778888899887766
Q ss_pred Ec
Q 019279 250 VN 251 (343)
Q Consensus 250 ~D 251 (343)
+=
T Consensus 77 ~~ 78 (182)
T PRK13660 77 IT 78 (182)
T ss_pred Ee
Confidence 53
No 62
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=41.77 E-value=70 Score=23.24 Aligned_cols=65 Identities=20% Similarity=0.084 Sum_probs=30.7
Q ss_pred cCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHH---HHHHHHHHHHHHHhhcCCce-EEEEc
Q 019279 187 LGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADL---YNPQLVQLVKDLNSQYGSEI-FVAVN 251 (343)
Q Consensus 187 ~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~---~N~~L~~~l~~l~~~~~~~~-i~~~D 251 (343)
-|||.||++.++=....|..........+..+.+..-.++ .-++|++.++.++++.|+.+ -.++|
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPPGPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCcEEEEEEccCCCccccccccCCCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeec
Confidence 4899999998875441111111111111222222221122 22566666666777777753 33455
No 63
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=39.54 E-value=25 Score=25.64 Aligned_cols=21 Identities=29% Similarity=0.370 Sum_probs=15.4
Q ss_pred HHHHHHHHHHcCCcEEEEeCC
Q 019279 177 YRKLLTRLYDLGARRVLVTGT 197 (343)
Q Consensus 177 ~~~~l~~L~~~Gar~~vv~~l 197 (343)
+.+.+++|.++||+.|++..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 345677899999999999765
No 64
>COG4474 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.53 E-value=2.4e+02 Score=24.11 Aligned_cols=56 Identities=27% Similarity=0.442 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEE
Q 019279 170 VKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVA 249 (343)
Q Consensus 170 v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 249 (343)
+..+-..|++.|+.|.+.|.+-+++.| .+|. + ..-.+.+.+|+++||+.++.+
T Consensus 24 ~~~IKkai~~~l~~lleeGleW~litG--qLG~----------------------E---~WA~Evv~eLk~eyp~ik~av 76 (180)
T COG4474 24 VSYIKKAIKKKLEALLEEGLEWVLITG--QLGF----------------------E---LWAAEVVIELKEEYPHIKLAV 76 (180)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEec--cccH----------------------H---HHHHHHHHHHHhhCCCeeEEE
Confidence 556778889999999999999999976 3331 1 223567788889999888776
Q ss_pred Ecc
Q 019279 250 VNT 252 (343)
Q Consensus 250 ~D~ 252 (343)
+-.
T Consensus 77 itp 79 (180)
T COG4474 77 ITP 79 (180)
T ss_pred Eec
Confidence 543
No 65
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=37.02 E-value=44 Score=25.78 Aligned_cols=23 Identities=30% Similarity=0.420 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCC
Q 019279 175 SEYRKLLTRLYDLGARRVLVTGT 197 (343)
Q Consensus 175 ~~~~~~l~~L~~~Gar~~vv~~l 197 (343)
+.+.+.+++|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 35667788999999999999754
No 66
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=33.34 E-value=1.5e+02 Score=23.97 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=25.5
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHH
Q 019279 177 YRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLY 227 (343)
Q Consensus 177 ~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~ 227 (343)
+.+.|++|.+.|+|+|+|+-+ .|.. .|.+.+-++-..+
T Consensus 79 ~~~~l~~l~~~G~~~i~v~p~-------gF~~------D~~Etl~di~~e~ 116 (135)
T cd00419 79 TDDALEELAKEGVKNVVVVPI-------GFVS------DHLETLYELDIEY 116 (135)
T ss_pred HHHHHHHHHHcCCCeEEEECC-------cccc------ccHHHHHHHHHHH
Confidence 345677888999999999643 2332 5777777665333
No 67
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=32.90 E-value=58 Score=25.82 Aligned_cols=19 Identities=26% Similarity=0.492 Sum_probs=15.5
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 019279 177 YRKLLTRLYDLGARRVLVT 195 (343)
Q Consensus 177 ~~~~l~~L~~~Gar~~vv~ 195 (343)
+.+.+++|.+.|+++|+|+
T Consensus 48 l~~~l~~l~~~g~~~v~vv 66 (126)
T PRK00923 48 IPEALKKLIGTGADKIIVV 66 (126)
T ss_pred HHHHHHHHHHcCCCEEEEE
Confidence 4456778889999999986
No 68
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=30.16 E-value=77 Score=31.78 Aligned_cols=61 Identities=13% Similarity=0.128 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcch
Q 019279 174 ISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTG 253 (343)
Q Consensus 174 v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 253 (343)
...+.+.++.|.+.|++-|+| .. ++.|+..+.++++++++++|+..++-.|+-
T Consensus 225 ~~~~~~~a~~Lv~aGvd~i~~-D~--------------------------a~~~~~~~~~~i~~ik~~~p~~~v~agnv~ 277 (479)
T PRK07807 225 NGDVAAKARALLEAGVDVLVV-DT--------------------------AHGHQEKMLEALRAVRALDPGVPIVAGNVV 277 (479)
T ss_pred ChhHHHHHHHHHHhCCCEEEE-ec--------------------------cCCccHHHHHHHHHHHHHCCCCeEEeeccC
Confidence 346778889999999987555 21 123467888899999999999888876655
Q ss_pred HH--HHHHHh
Q 019279 254 KM--QYNFIS 261 (343)
Q Consensus 254 ~~--~~~i~~ 261 (343)
+. ..++++
T Consensus 278 t~~~a~~l~~ 287 (479)
T PRK07807 278 TAEGTRDLVE 287 (479)
T ss_pred CHHHHHHHHH
Confidence 54 444444
No 69
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=29.96 E-value=80 Score=29.45 Aligned_cols=17 Identities=18% Similarity=0.352 Sum_probs=13.0
Q ss_pred CcEEEEEeccchhhhhh
Q 019279 136 GALILITVGGNDFVNNY 152 (343)
Q Consensus 136 ~sL~~i~iG~ND~~~~~ 152 (343)
+-+=++.||.||+....
T Consensus 196 ~~~DF~SIGtNDLtQy~ 212 (293)
T PF02896_consen 196 KEVDFFSIGTNDLTQYT 212 (293)
T ss_dssp TTSSEEEEEHHHHHHHH
T ss_pred HHCCEEEEChhHHHHHH
Confidence 34568899999998643
No 70
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=28.57 E-value=1.6e+02 Score=25.74 Aligned_cols=50 Identities=10% Similarity=0.011 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcch
Q 019279 174 ISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTG 253 (343)
Q Consensus 174 v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 253 (343)
-..+...++.|.+.|+++|.+..+-. . .+.++.+.+++|+++|+..-+.
T Consensus 135 G~Tl~~ai~~L~~~G~~~I~v~~ll~---------~----------------------~~gl~~l~~~~p~v~i~~~~id 183 (207)
T TIGR01091 135 GGTMIAALDLLKKRGAKKIKVLSIVA---------A----------------------PEGIEAVEKAHPDVDIYTAAID 183 (207)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEEec---------C----------------------HHHHHHHHHHCCCCEEEEEEEC
Confidence 34577788999999999988876510 0 2456667778999998876544
Q ss_pred H
Q 019279 254 K 254 (343)
Q Consensus 254 ~ 254 (343)
.
T Consensus 184 ~ 184 (207)
T TIGR01091 184 E 184 (207)
T ss_pred C
Confidence 3
No 71
>COG1903 CbiD Cobalamin biosynthesis protein CbiD [Coenzyme metabolism]
Probab=27.87 E-value=5.2e+02 Score=24.95 Aligned_cols=89 Identities=18% Similarity=0.264 Sum_probs=52.8
Q ss_pred hcCccccCCCCCCcccccCHHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccc--hhhhhhhcCccCccCCCCC
Q 019279 88 SAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGN--DFVNNYYLVPYSARSRQFS 165 (343)
Q Consensus 88 ~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~N--D~~~~~~~~~~~~~~~~~~ 165 (343)
+||-+++..++. ..+.+-..++..+...++..+.. .-.-+++-.|.+ |+...++. .
T Consensus 167 vGGISILGTTGI--v~P~S~~a~~~si~~~l~~~r~~----------~~~~iv~~~Gn~g~~~a~~~~~----------~ 224 (367)
T COG1903 167 VGGISILGTTGI--VEPMSEEAYLASIRSELDVARAA----------GLDHVVFCPGNTGEDYARKLFI----------L 224 (367)
T ss_pred ccceEeecCCcc--cCcCChHHHHHHHHHHHHHHHhc----------CCcEEEEccChhHHHHHHHhcC----------C
Confidence 344455554443 23566667777666555432211 223344556655 34333321 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCC
Q 019279 166 LPDYVKYVISEYRKLLTRLYDLGARRVLVTGTG 198 (343)
Q Consensus 166 ~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lp 198 (343)
.+..+-.+.+-+...|+...++|.+++++++.|
T Consensus 225 ~~~~~v~~~n~vG~~l~~a~~~~~~~i~i~G~p 257 (367)
T COG1903 225 PEQAIVKMGNFVGSMLKEARELGVKEILIFGHP 257 (367)
T ss_pred chHHHhhHHHHHHHHHHHHHhcCCCEEEEEcCh
Confidence 233456667778888999999999999999987
No 72
>PF11691 DUF3288: Protein of unknown function (DUF3288); InterPro: IPR021705 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=27.77 E-value=35 Score=25.79 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=30.1
Q ss_pred CCCChhHHHHHHHHHHHHcCCCCCcCCCChHHhhcCCCC
Q 019279 304 DPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMALDSR 342 (343)
Q Consensus 304 D~vHPT~~~h~~iA~~~~~~~~~~~~P~~~~~l~~~~~~ 342 (343)
|--||-.+.-+.+-+.++... ..+.+|.+|+.|..|
T Consensus 2 dQ~HP~~~~DR~~vd~Ll~~~---p~d~~L~eLARL~iR 37 (90)
T PF11691_consen 2 DQQHPQYKTDREIVDRLLAGE---PTDYNLAELARLRIR 37 (90)
T ss_pred CccCcchhhhHHHHHHHHcCC---CCchhHHHHHHHHHH
Confidence 567999999999999999874 567899999988543
No 73
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=27.38 E-value=1.2e+02 Score=24.46 Aligned_cols=26 Identities=12% Similarity=0.138 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019279 217 AADLQRAADLYNPQLVQLVKDLNSQY 242 (343)
Q Consensus 217 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 242 (343)
.+..+.+++.||+.|++.|.++++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56788999999999999999999875
No 74
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=26.39 E-value=1.8e+02 Score=26.86 Aligned_cols=49 Identities=22% Similarity=0.274 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCC----ceEEEEcchHHHHHHHhCCcCCCCccc
Q 019279 217 AADLQRAADLYNPQLVQLVKDLNSQYGS----EIFVAVNTGKMQYNFISNPRAFGFTTS 271 (343)
Q Consensus 217 ~~~~~~~~~~~N~~L~~~l~~l~~~~~~----~~i~~~D~~~~~~~i~~np~~yGf~~~ 271 (343)
.+.+..-.+.||.+|.+.=+++..++.- --+++-|.|+.|++ .||.+.+
T Consensus 179 ~a~y~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~------~ygl~~~ 231 (318)
T COG4531 179 AAKYDANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFEN------AYGLKPL 231 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHH------hhCcccc
Confidence 4567777788999998887777776642 35888999999985 6776654
No 75
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=24.82 E-value=2.4e+02 Score=26.78 Aligned_cols=56 Identities=5% Similarity=-0.093 Sum_probs=37.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHH
Q 019279 165 SLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQ 233 (343)
Q Consensus 165 ~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~ 233 (343)
+..+++..++..+.+.++.|+++|+|.|-| .=|.+.. .|.+.+...++.+|..++.
T Consensus 146 ~~~el~~dlA~al~~Ei~~L~~aG~~~IQi-DeP~l~~------------~~~~~~~~~v~~~n~~~~g 201 (339)
T PRK09121 146 SREKLAWEFAKILNQEAKELEAAGVDIIQF-DEPAFNV------------FFDEVNDWGVAALERAIEG 201 (339)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe-cccHHhh------------hhHHHHHHHHHHHHHHHcC
Confidence 457889999999999999999999987655 3232221 2333455555666665543
No 76
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=24.32 E-value=2.4e+02 Score=26.71 Aligned_cols=22 Identities=23% Similarity=0.311 Sum_probs=17.5
Q ss_pred HHHHHHHHHcCCcEEEEeCCCC
Q 019279 178 RKLLTRLYDLGARRVLVTGTGP 199 (343)
Q Consensus 178 ~~~l~~L~~~Gar~~vv~~lpp 199 (343)
.+.|++|.+.|.+++|++-+-|
T Consensus 105 ~~~v~~l~~~gv~~iv~~pLyP 126 (320)
T COG0276 105 EEAVEELKKDGVERIVVLPLYP 126 (320)
T ss_pred HHHHHHHHHcCCCeEEEEECCc
Confidence 3567788899999999987654
No 77
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.31 E-value=98 Score=30.06 Aligned_cols=46 Identities=24% Similarity=0.402 Sum_probs=32.7
Q ss_pred HHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcch
Q 019279 184 LYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTG 253 (343)
Q Consensus 184 L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 253 (343)
+.+.|+..+ +-+-|.||.|.-... +.++.++++++|+++++-+|..
T Consensus 328 ~i~~g~~nv--IclqPFGCmPnhI~~----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 328 LIESGVDNV--ICLQPFGCMPNHIVS----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHcCCCce--EEecCccCCcHHHHH----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 344566654 457799999944322 4577888889999998888865
No 78
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=24.14 E-value=2.2e+02 Score=24.93 Aligned_cols=48 Identities=13% Similarity=0.023 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEcch
Q 019279 175 SEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTG 253 (343)
Q Consensus 175 ~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 253 (343)
..+...++.|.+.|+++|.+..+- .+ .+.++.+.+++|+++|+..-+.
T Consensus 138 ~Tl~~ai~~L~~~G~~~I~~~~ll--~~-----------------------------~~gl~~l~~~~p~v~i~~~~iD 185 (209)
T PRK00129 138 GSAIAAIDLLKKRGAKNIKVLCLV--AA-----------------------------PEGIKALEEAHPDVEIYTAAID 185 (209)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEe--cC-----------------------------HHHHHHHHHHCCCcEEEEEeec
Confidence 457778899999999999887651 10 3456667778899998775443
No 79
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=23.38 E-value=91 Score=25.99 Aligned_cols=23 Identities=26% Similarity=0.297 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCC
Q 019279 177 YRKLLTRLYDLGARRVLVTGTGP 199 (343)
Q Consensus 177 ~~~~l~~L~~~Gar~~vv~~lpp 199 (343)
+.+.|++|.+.|+++++++.+.|
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P 123 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYP 123 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCc
Confidence 44567889999999999987765
No 80
>PRK03601 transcriptional regulator HdfR; Provisional
Probab=23.22 E-value=4.8e+02 Score=23.31 Aligned_cols=76 Identities=11% Similarity=0.144 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Q 019279 168 DYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIF 247 (343)
Q Consensus 168 ~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 247 (343)
+.+..+++.+.+..+.+...+.+.-+.+++++ . .....+...+.++++++|+.++
T Consensus 66 ~~a~~~l~~~~~~~~~~~~~~~~~~l~Ig~~~-----~--------------------~~~~~l~~~l~~f~~~~P~v~v 120 (275)
T PRK03601 66 PYAETLMNTWQAAKKEVAHTSQHNELSIGASA-----S--------------------LWECMLTPWLGRLYQNQEALQF 120 (275)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCceEEEeccH-----H--------------------HHHHHHHHHHHHHHHhCCCcEE
Confidence 45566677777766666655443333333322 1 1235667788889999999877
Q ss_pred EE--EcchHHHHHHHhCCcCCCC
Q 019279 248 VA--VNTGKMQYNFISNPRAFGF 268 (343)
Q Consensus 248 ~~--~D~~~~~~~i~~np~~yGf 268 (343)
.+ .+...++.++.+.--.+++
T Consensus 121 ~~~~~~~~~~~~~l~~g~~Dl~i 143 (275)
T PRK03601 121 EARIAQRQSLVKQLHERQLDLLI 143 (275)
T ss_pred EEEECChHHHHHHHHcCCCCEEE
Confidence 54 3455567777776666665
No 81
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=23.05 E-value=39 Score=27.56 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=15.9
Q ss_pred HcCCcEEEEeCCCCCCC-cccc
Q 019279 186 DLGARRVLVTGTGPLGC-VPAE 206 (343)
Q Consensus 186 ~~Gar~~vv~~lpplg~-~P~~ 206 (343)
..|||+||++|+|-+.. -|.+
T Consensus 42 ~~GARdFVfwNipQiQykNP~V 63 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQYKNPKV 63 (169)
T ss_pred ccCccceEEecchhhcccCCce
Confidence 46999999999997754 2444
No 82
>COG4053 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.29 E-value=5.3e+02 Score=22.51 Aligned_cols=27 Identities=7% Similarity=-0.007 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCC
Q 019279 172 YVISEYRKLLTRLYDLGARRVLVTGTG 198 (343)
Q Consensus 172 ~~v~~~~~~l~~L~~~Gar~~vv~~lp 198 (343)
.+...+.+.|+.|...++-+..+-|+-
T Consensus 23 ~l~~~ve~~ik~ll~~~~~~a~l~nit 49 (244)
T COG4053 23 KLNELVEKEIKKLLSKLGIKATLSNIT 49 (244)
T ss_pred HHHHHHHHHHHHHHHhhcceeEecccc
Confidence 456666777777777777676666553
No 83
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=21.79 E-value=4.1e+02 Score=28.91 Aligned_cols=77 Identities=10% Similarity=0.153 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCce
Q 019279 167 PDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEI 246 (343)
Q Consensus 167 ~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 246 (343)
.+.++.-++.++..|++-.+.|.+-|-+ ++| ..|.++.... .++...-.... .+|-+.+++|.++|| +
T Consensus 800 ~~~~~~~~~~l~~~i~~~~~~~~~~ig~--~~p--~~p~y~~t~~--fg~~g~~rs~a----~~~~~~~~~~~~~y~--~ 867 (912)
T TIGR02171 800 QQIINENMNSLKAFIDETAKKGVKVIGT--IFP--QSPGYKNTGS--FGRYGPRRSIA----KKIIDSFKKMEKTYP--H 867 (912)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEE--ECC--CCCCccccCc--ccccCcchhhH----HHHHHHHHHHHhhCC--c
Confidence 4567778899999999999999875544 233 4577775532 22222222222 566677888888998 6
Q ss_pred EEEEcchHH
Q 019279 247 FVAVNTGKM 255 (343)
Q Consensus 247 i~~~D~~~~ 255 (343)
++++|=+..
T Consensus 868 f~~~denk~ 876 (912)
T TIGR02171 868 FILFDENKD 876 (912)
T ss_pred eEEEecCcC
Confidence 778886643
No 84
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=21.42 E-value=3.4e+02 Score=24.98 Aligned_cols=76 Identities=13% Similarity=0.038 Sum_probs=47.0
Q ss_pred cCcEEEEEeccchhhhhhhcCccCccCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCC-CCCccccccccCCC
Q 019279 135 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGP-LGCVPAERAMRGRN 213 (343)
Q Consensus 135 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpp-lg~~P~~~~~~~~~ 213 (343)
++..++|-+|+|=+.. ++..+.+...|..|+..|.|-|+|.+-.| +..... .
T Consensus 34 ~~~f~VIK~GG~~~~~--------------------~~~~~~l~~dla~L~~lGl~~VlVHGggp~i~~~l~-----~-- 86 (271)
T cd04236 34 WPAFAVLEVDHSVFRS--------------------LEMVQSLSFGLAFLQRMDMKLLVVMGLSAPDGTNMS-----D-- 86 (271)
T ss_pred CCCEEEEEEChhhhcC--------------------chhHHHHHHHHHHHHHCCCeEEEEeCCChHHhhhhc-----C--
Confidence 5788899999986531 12255667778899999999999999865 221111 0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHH
Q 019279 214 GQCAADLQRAADLYNPQLVQLVKDL 238 (343)
Q Consensus 214 ~~~~~~~~~~~~~~N~~L~~~l~~l 238 (343)
.-..........-|..|.+.+++.
T Consensus 87 -~~~~~~~~v~~~~n~~Lv~~L~~~ 110 (271)
T cd04236 87 -LELQAARSRLVKDCKTLVEALQAN 110 (271)
T ss_pred -CcchheehhHHHHHHHHHHHHHhC
Confidence 001112222236677777777664
No 85
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=21.07 E-value=40 Score=29.37 Aligned_cols=17 Identities=29% Similarity=0.354 Sum_probs=13.8
Q ss_pred CCCEEEEcCCcccccCC
Q 019279 29 AARAFFVFGDSLVDNGN 45 (343)
Q Consensus 29 ~~~~l~vFGDSlsD~Gn 45 (343)
+...+++||||..|.-=
T Consensus 201 ~~~~~~~~GD~~ND~~M 217 (254)
T PF08282_consen 201 SPEDIIAFGDSENDIEM 217 (254)
T ss_dssp SGGGEEEEESSGGGHHH
T ss_pred ccceeEEeecccccHhH
Confidence 35789999999999743
No 86
>PF04311 DUF459: Protein of unknown function (DUF459); InterPro: IPR007407 This is a putative periplasmic protein.
Probab=20.95 E-value=82 Score=29.89 Aligned_cols=15 Identities=27% Similarity=0.594 Sum_probs=10.7
Q ss_pred CcEEEEEeccchhhh
Q 019279 136 GALILITVGGNDFVN 150 (343)
Q Consensus 136 ~sL~~i~iG~ND~~~ 150 (343)
.++.++.+|.||--.
T Consensus 102 ~~vvv~miG~nDrq~ 116 (327)
T PF04311_consen 102 AAVVVVMIGSNDRQQ 116 (327)
T ss_pred ceEEEEEeccCCCcc
Confidence 344455999999864
No 87
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=20.93 E-value=50 Score=30.01 Aligned_cols=17 Identities=18% Similarity=0.104 Sum_probs=14.4
Q ss_pred CCCEEEEcCCcccccCC
Q 019279 29 AARAFFVFGDSLVDNGN 45 (343)
Q Consensus 29 ~~~~l~vFGDSlsD~Gn 45 (343)
+...+++||||..|.-=
T Consensus 205 ~~~~viafGDs~NDi~M 221 (271)
T PRK03669 205 TRPTTLGLGDGPNDAPL 221 (271)
T ss_pred CCceEEEEcCCHHHHHH
Confidence 46789999999999754
No 88
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=20.58 E-value=1.1e+02 Score=23.53 Aligned_cols=18 Identities=22% Similarity=0.464 Sum_probs=14.6
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 019279 178 RKLLTRLYDLGARRVLVT 195 (343)
Q Consensus 178 ~~~l~~L~~~Gar~~vv~ 195 (343)
.+.+++|.+.|+++|+|+
T Consensus 45 ~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 45 DDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 456678889999999885
No 89
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=20.38 E-value=1.4e+02 Score=22.15 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=17.5
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCC
Q 019279 178 RKLLTRLYDLGARRVLVTGTGPL 200 (343)
Q Consensus 178 ~~~l~~L~~~Gar~~vv~~lppl 200 (343)
.+.+++|.+.|.++|+|+-+.+.
T Consensus 48 ~~~l~~l~~~g~~~vvvvPl~~~ 70 (101)
T cd03409 48 EEAIRELAEEGYQRVVIVPLAPV 70 (101)
T ss_pred HHHHHHHHHcCCCeEEEEeCccc
Confidence 35677888999999999765543
No 90
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=20.37 E-value=36 Score=23.55 Aligned_cols=9 Identities=44% Similarity=1.475 Sum_probs=7.2
Q ss_pred eEeCCCChh
Q 019279 301 AFWDPFHPS 309 (343)
Q Consensus 301 lfwD~vHPT 309 (343)
-|||.+||.
T Consensus 52 ~~W~~l~P~ 60 (62)
T PF06812_consen 52 NYWDSLHPQ 60 (62)
T ss_pred HCCcccCCC
Confidence 369999995
No 91
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=20.34 E-value=2e+02 Score=22.72 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 019279 217 AADLQRAADLYNPQLVQLVKDLNSQYG 243 (343)
Q Consensus 217 ~~~~~~~~~~~N~~L~~~l~~l~~~~~ 243 (343)
.+..+.++..||+.|++.+.++++++.
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H~ 83 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQHH 83 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467888999999999999999998763
No 92
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=20.00 E-value=4.5e+02 Score=24.35 Aligned_cols=54 Identities=22% Similarity=0.239 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccccccCCCCCchHHHHHHHHHHHHHHH
Q 019279 167 PDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLV 232 (343)
Q Consensus 167 ~~~v~~~v~~~~~~l~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~L~ 232 (343)
++.++..++.+.+.+++...+|++.+++- |.+.... .-.+.++++.+..|+.+.
T Consensus 79 ~e~~ekS~~~l~~e~~r~~~lG~~~lv~H--------pG~~~~~----~~e~~l~~i~~~Ln~~~~ 132 (280)
T COG0648 79 KEKVEKSIERLIDEIDRCEQLGAKLLVFH--------PGSYLGQ----GKEEGLNRIAEALNELLE 132 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcEEEEC--------CccccCC----CHHHHHHHHHHHHHHHhh
Confidence 36678899999999999999999888774 3333221 134566777777776665
Done!