Query 019280
Match_columns 343
No_of_seqs 239 out of 2193
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 13:39:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019280.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019280hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hqi_A Speckle-type POZ protei 100.0 5.5E-59 1.9E-63 423.0 30.6 297 19-342 2-308 (312)
2 3htm_A Speckle-type POZ protei 100.0 9.3E-33 3.2E-37 228.8 15.9 156 170-342 12-168 (172)
3 4eoz_A Speckle-type POZ protei 100.0 9.1E-31 3.1E-35 210.6 8.8 142 170-328 3-145 (145)
4 3hve_A Gigaxonin; ubiquitin, c 100.0 9.9E-30 3.4E-34 224.0 13.4 151 175-342 14-167 (256)
5 3i3n_A Kelch-like protein 11; 100.0 3.7E-29 1.3E-33 223.0 9.7 150 175-341 15-174 (279)
6 3ivv_A Speckle-type POZ protei 99.9 1.5E-26 5E-31 185.8 13.3 135 17-161 4-144 (145)
7 2if5_A Zinc finger and BTB dom 99.9 4.2E-26 1.4E-30 177.2 10.5 110 176-302 9-119 (120)
8 1r29_A B-cell lymphoma 6 prote 99.9 1.5E-25 5.3E-30 175.7 12.1 115 174-305 11-126 (127)
9 4ghu_A TNF receptor-associated 99.9 7.4E-26 2.5E-30 190.0 10.1 140 20-161 36-188 (198)
10 2z8h_A Transcription regulator 99.9 8.2E-26 2.8E-30 179.8 9.3 120 173-310 17-137 (138)
11 2vkp_A BTB/POZ domain-containi 99.9 2.5E-25 8.7E-30 169.7 10.5 104 186-306 2-109 (109)
12 4gjh_A TNF receptor-associated 99.9 2.6E-25 9E-30 184.3 10.3 137 20-160 20-173 (178)
13 3b84_A Zinc finger and BTB dom 99.9 2.1E-25 7.1E-30 172.9 8.9 110 176-305 8-117 (119)
14 2ppi_A Gigaxonin; BTB domain, 99.9 2E-25 6.7E-30 178.7 8.6 111 176-303 31-144 (144)
15 2vpk_A Myoneurin; transcriptio 99.9 4.7E-25 1.6E-29 170.2 10.0 109 176-304 6-116 (116)
16 1lb6_A TNF receptor-associated 99.9 1.1E-24 3.8E-29 177.7 11.7 138 22-161 3-157 (160)
17 2yy9_A Zinc finger and BTB dom 99.9 4.8E-25 1.6E-29 174.6 9.2 114 176-309 9-122 (135)
18 1buo_A POZ domain, protein (pr 99.9 9.5E-25 3.3E-29 169.7 10.7 110 175-305 11-120 (121)
19 2foj_A Ubiquitin carboxyl-term 99.9 2.3E-24 7.7E-29 175.0 12.7 128 21-161 16-149 (155)
20 2gkw_A TNF receptor-associated 99.9 1.9E-24 6.6E-29 181.1 8.3 135 22-160 38-187 (192)
21 2q81_A MIZ-1 protein; BTB/POZ 99.9 1.5E-24 5.3E-29 167.9 7.0 108 175-303 10-117 (119)
22 1ca9_A TRAF2, protein (TNF rec 99.9 2.6E-24 8.9E-29 180.7 8.5 135 21-160 40-190 (192)
23 2ihc_A Transcription regulator 99.9 3.7E-25 1.3E-29 172.7 2.5 112 174-303 11-123 (124)
24 1d00_A Tumor necrosis factor r 99.9 7.8E-24 2.7E-28 174.2 9.4 135 21-160 16-166 (168)
25 3ohu_A Transcription regulator 99.9 6.6E-25 2.3E-29 171.6 2.6 109 176-302 16-125 (125)
26 3ga1_A Nucleus accumbens-assoc 99.9 1.8E-24 6.1E-29 170.1 4.5 110 176-305 17-127 (129)
27 1flk_A TNF receptor associated 99.9 8.6E-24 3E-28 181.7 8.1 140 21-161 73-224 (228)
28 3m5b_A Zinc finger and BTB dom 99.9 1.7E-22 5.8E-27 156.0 8.0 102 176-304 16-117 (119)
29 3fkc_A Transcriptional regulat 99.9 5.7E-22 2E-26 152.6 8.8 100 176-296 15-115 (116)
30 2f1z_A Ubiquitin carboxyl-term 99.8 2.9E-20 9.9E-25 179.6 12.7 128 21-161 28-161 (522)
31 2ast_A S-phase kinase-associat 99.5 1.2E-13 4.2E-18 111.6 9.4 131 195-326 3-149 (159)
32 4gwm_A Meprin A subunit beta; 99.4 1.1E-12 3.7E-17 125.9 12.1 135 18-161 400-567 (592)
33 4ajy_C Transcription elongatio 99.2 4E-11 1.4E-15 88.3 8.3 78 195-290 4-96 (97)
34 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 2.9E-10 9.8E-15 89.7 7.5 113 195-311 4-126 (141)
35 2p1m_A SKP1-like protein 1A; F 99.0 7.1E-11 2.4E-15 95.3 3.2 127 195-324 6-146 (160)
36 3drz_A BTB/POZ domain-containi 98.7 2E-07 6.7E-12 69.7 10.7 94 194-304 7-106 (107)
37 3v7d_A Suppressor of kinetocho 98.4 9.4E-07 3.2E-11 71.5 9.5 130 194-324 8-154 (169)
38 2fnj_C Transcription elongatio 98.4 4.2E-07 1.4E-11 66.3 6.6 84 195-291 3-96 (96)
39 1hv2_A Elongin C, ELC1; protei 98.4 4.7E-07 1.6E-11 66.5 6.3 90 194-291 5-99 (99)
40 1vcb_B Protein (elongin C); tu 98.0 1.2E-05 4E-10 60.3 5.6 90 194-291 18-112 (112)
41 3drx_A BTB/POZ domain-containi 97.9 4.4E-05 1.5E-09 62.8 8.0 94 194-304 13-112 (202)
42 2eqx_A Kelch repeat and BTB do 97.2 0.00017 6E-09 53.3 2.7 40 302-341 4-43 (105)
43 3kvt_A Potassium channel prote 97.1 0.00049 1.7E-08 51.6 4.1 95 194-305 6-105 (115)
44 1s1g_A Potassium voltage-gated 96.7 0.0046 1.6E-07 46.9 6.9 92 192-303 12-110 (124)
45 1t1d_A Protein (potassium chan 96.6 0.0025 8.6E-08 46.4 5.0 88 195-299 3-95 (100)
46 2nz0_B Potassium voltage-gated 96.2 0.011 3.6E-07 45.9 6.7 83 192-294 34-121 (140)
47 1nn7_A Potassium channel KV4.2 96.0 0.0071 2.4E-07 44.4 4.4 88 195-302 2-96 (105)
48 2vkp_A BTB/POZ domain-containi 91.7 0.17 5.9E-06 36.8 4.0 34 305-338 76-109 (109)
49 2eqx_A Kelch repeat and BTB do 91.1 0.51 1.7E-05 34.2 6.0 58 279-337 13-82 (105)
50 2r9r_B Paddle chimera voltage 88.2 0.76 2.6E-05 43.6 6.4 82 194-295 53-141 (514)
51 2z8h_A Transcription regulator 87.6 0.3 1E-05 37.4 2.6 36 305-340 100-135 (138)
52 1r29_A B-cell lymphoma 6 prote 85.7 0.77 2.6E-05 34.3 4.0 32 306-337 95-126 (127)
53 2yy9_A Zinc finger and BTB dom 84.7 0.39 1.3E-05 36.6 1.9 36 305-340 86-121 (135)
54 1buo_A POZ domain, protein (pr 82.6 1.4 5E-05 32.5 4.3 32 306-337 89-120 (121)
55 2q81_A MIZ-1 protein; BTB/POZ 82.6 1.1 3.8E-05 33.0 3.6 31 305-335 87-117 (119)
56 2vpk_A Myoneurin; transcriptio 82.3 1.1 3.7E-05 32.9 3.4 30 306-335 86-115 (116)
57 3b84_A Zinc finger and BTB dom 81.3 0.75 2.6E-05 34.0 2.3 32 306-337 86-117 (119)
58 2if5_A Zinc finger and BTB dom 80.1 1.9 6.6E-05 31.6 4.2 29 306-334 91-119 (120)
59 3htm_A Speckle-type POZ protei 76.5 2.5 8.5E-05 33.2 4.1 34 306-339 100-133 (172)
60 2ppi_A Gigaxonin; BTB domain, 71.9 1.7 5.9E-05 33.3 2.0 30 305-334 114-143 (144)
61 4eoz_A Speckle-type POZ protei 71.8 1.7 6E-05 33.0 2.0 34 306-339 91-124 (145)
62 3m5b_A Zinc finger and BTB dom 69.5 3.2 0.00011 30.6 2.9 32 305-336 86-117 (119)
63 3ga1_A Nucleus accumbens-assoc 67.6 0.96 3.3E-05 33.9 -0.4 33 305-337 95-127 (129)
64 3hqi_A Speckle-type POZ protei 64.8 6 0.00021 34.4 4.3 28 279-306 277-304 (312)
65 2plx_B Peptide inhibitor; heli 64.4 7.2 0.00025 19.3 2.6 21 313-333 3-23 (26)
66 3hve_A Gigaxonin; ubiquitin, c 63.9 5.5 0.00019 33.6 3.7 35 305-339 98-132 (256)
67 3i3n_A Kelch-like protein 11; 59.1 5.8 0.0002 33.9 3.1 34 306-339 107-140 (279)
68 2ast_A S-phase kinase-associat 55.2 19 0.00064 27.9 5.2 42 296-339 86-127 (159)
69 3v0r_A Major allergen ALT A 1; 53.7 2.6 8.8E-05 31.5 -0.2 28 22-51 10-37 (133)
70 2ihc_A Transcription regulator 48.9 1.1 3.8E-05 33.3 -2.9 30 306-335 94-123 (124)
71 1fs1_B SKP1, cyclin A/CDK2-ass 43.6 47 0.0016 25.0 5.6 42 296-339 81-122 (141)
72 2cmy_B Beta trypsin, veronica 41.5 18 0.00062 19.0 2.0 23 312-334 7-29 (34)
73 3ohu_A Transcription regulator 38.4 1.5 5E-05 32.6 -3.8 29 305-333 96-124 (125)
74 1l9l_A Granulysin; saposin fol 26.8 1E+02 0.0035 20.3 4.4 46 294-340 10-55 (74)
75 2p1m_A SKP1-like protein 1A; F 25.3 49 0.0017 25.6 3.0 34 306-339 93-126 (160)
No 1
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=100.00 E-value=5.5e-59 Score=422.96 Aligned_cols=297 Identities=35% Similarity=0.652 Sum_probs=251.3
Q ss_pred cceeceEEEEEEcCccccccCCCCCeEeecccccCCe---eEEEEEEcCCCCCCCCCCeEEEEEEeeC-CCceeEEEEEE
Q 019280 19 TETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGGY---QWAIYFYPDGKNPEDNSAYVSVFIALAN-EGTDVRALFEL 94 (343)
Q Consensus 19 ~~~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~gg~---~W~L~v~p~g~~~~~~~~~lsl~l~~~~-~~w~~~~~~~~ 94 (343)
+++..++|+|+|+||+.++ .+.|+.+.||+|.+||+ +|+|.+||+|.+. ++++|+|+||.|.+ .+|++.|+|++
T Consensus 2 s~~~~~~~~w~I~nfs~~~-~~~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~-~~~~~lslyL~~~~~~~~~v~a~~~~ 79 (312)
T 3hqi_A 2 SKVVKFSYMWTINNFSFCR-EEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDE-ESKDYLSLYLLLVSCPKSEVRAKFKF 79 (312)
T ss_dssp EEEEEEEEEEEETTGGGCC-CCTTCCEECCCBCC--CCCCEEEEEEETTCCC---CTTEEEEEEEEEECCC-CEEEEEEE
T ss_pred CceEEEEEEEEEcCcchhh-hcCCCeEeeCCcccCCCCCceEEEEEECCCCCc-cCCCcEEEEEEEcCCCCCcEEEEEEE
Confidence 3567899999999999987 46789999999999985 9999999999874 36799999999976 56999999999
Q ss_pred EEecCCCCCccceecccccccccCCeeecccCcccccccccchhcc--ccCcCCCCCcEEEEEeeeeeeeec---ccCCc
Q 019280 95 TLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAI---DCSRL 169 (343)
Q Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~G~~~fi~~~~L--~~~~yl~~d~l~i~~~v~i~~~~~---~~~~~ 169 (343)
+|+|++|+....... ...+.|. ++.+|||++|++|++| +.++|+.||+++|+|+|.+..... .....
T Consensus 80 ~l~~~~~~~~~~~~~-------~~~~~F~-~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~~~~~ 151 (312)
T 3hqi_A 80 SILNAKGEETKAMES-------QRAYRFV-QGKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTM 151 (312)
T ss_dssp EEECTTSCEEEEEEC-------SSCEEEC-TTCEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEECCCCC
T ss_pred EEEeCCCCccccccc-------CCceeCC-CCCCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEeccccccccccc
Confidence 999998876433211 1345665 3458999999999999 456899999999999999986422 12233
Q ss_pred cccccCcccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccc-cceEEecCCCHHHHHHHhh
Q 019280 170 HSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLH 248 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~-~~~i~l~~~~~~~~~~~L~ 248 (343)
+.+.+|++.+.+++..++.++.++||+|.|+|++|+|||.|||+|||||++||.++++|+ ..+|.|+++++++|+.+|+
T Consensus 152 ~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~ 231 (312)
T 3hqi_A 152 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 231 (312)
T ss_dssp SSCCCCCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHH
T ss_pred cccCCCCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHH
Confidence 567788999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhccCCCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhccCChhhHHHHHHHHhhcCchHHHH
Q 019280 249 FIYRDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHATELKA 328 (343)
Q Consensus 249 ~iY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i~~~~~~~~l~~a~~~~~~~L~~ 328 (343)
|||++.+++...+ +.+||.+|++|+++.|+..|+++|.+.++.+|++.++.+|++|++..|++
T Consensus 232 ~iYt~~~~~~~~~-----------------~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~ 294 (312)
T 3hqi_A 232 FIYTGKAPNLDKM-----------------ADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 294 (312)
T ss_dssp HHHHSCCTTHHHH-----------------HHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHH
T ss_pred hhcCCCCCChHHH-----------------HHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHH
Confidence 9999998765443 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCC
Q 019280 329 VCLRFAAENLAGTD 342 (343)
Q Consensus 329 ~~~~~i~~~~~~v~ 342 (343)
.|++||.+|+.+|.
T Consensus 295 ~~~~~i~~~~~~v~ 308 (312)
T 3hqi_A 295 QAVDFINYHATDVL 308 (312)
T ss_dssp HHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998874
No 2
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=100.00 E-value=9.3e-33 Score=228.78 Aligned_cols=156 Identities=42% Similarity=0.681 Sum_probs=146.2
Q ss_pred cccccCcccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccc-cceEEecCCCHHHHHHHhh
Q 019280 170 HSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLH 248 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~-~~~i~l~~~~~~~~~~~L~ 248 (343)
..+..|++.+.+++.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.|+ ..+|.++++++++|+.+|+
T Consensus 12 ~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~ 91 (172)
T 3htm_A 12 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 91 (172)
T ss_dssp CCSCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHH
Confidence 456778899999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hhccCCCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhccCChhhHHHHHHHHhhcCchHHHH
Q 019280 249 FIYRDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHATELKA 328 (343)
Q Consensus 249 ~iY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i~~~~~~~~l~~a~~~~~~~L~~ 328 (343)
|+|+|.++++..+ +.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|.+|+++.|++
T Consensus 92 ~~Yt~~~~~~~~~-----------------~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~ 154 (172)
T 3htm_A 92 FIYTGKAPNLDKM-----------------ADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 154 (172)
T ss_dssp HHHHSCCTTGGGT-----------------HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHH
T ss_pred HHhCCCCCCcHHH-----------------HHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHH
Confidence 9999999877665 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCC
Q 019280 329 VCLRFAAENLAGTD 342 (343)
Q Consensus 329 ~~~~~i~~~~~~v~ 342 (343)
.|++||.+||.+|.
T Consensus 155 ~~~~~i~~~~~~v~ 168 (172)
T 3htm_A 155 QAVDFINYHATDVL 168 (172)
T ss_dssp HHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999874
No 3
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.97 E-value=9.1e-31 Score=210.61 Aligned_cols=142 Identities=45% Similarity=0.747 Sum_probs=108.5
Q ss_pred cccccCcccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccc-cceEEecCCCHHHHHHHhh
Q 019280 170 HSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLH 248 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~-~~~i~l~~~~~~~~~~~L~ 248 (343)
+.+.+|++.+.+++.+++.++.++||+|.++|+.|+|||.||+++|+||++||.+++.|+ ..+|.++++++++|+.+|+
T Consensus 3 ~~v~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~ 82 (145)
T 4eoz_A 3 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 82 (145)
T ss_dssp --CCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHH
T ss_pred CcccCChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHH
Confidence 356778899999999999999999999999999999999999999999999999999998 8999999999999999999
Q ss_pred hhccCCCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhccCChhhHHHHHHHHhhcCchHHHH
Q 019280 249 FIYRDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHATELKA 328 (343)
Q Consensus 249 ~iY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i~~~~~~~~l~~a~~~~~~~L~~ 328 (343)
|+|+|.++++..+ +.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|++|++.+|++
T Consensus 83 ~~Y~~~~~~~~~~-----------------~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 83 FIYTGKAPNLDKM-----------------ADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHHSCCTTGGGT-----------------HHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred hhccCccCCcHHH-----------------HHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 9999999877665 99999999999999999999999999999999999999999999999874
No 4
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=9.9e-30 Score=223.97 Aligned_cols=151 Identities=18% Similarity=0.282 Sum_probs=133.9
Q ss_pred CcccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccc--cc-cceEEecCCCHHHHHHHhhhhc
Q 019280 175 PESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELE--ED-KQEIIISDLEPKVFKAMLHFIY 251 (343)
Q Consensus 175 ~~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~--e~-~~~i~l~~~~~~~~~~~L~~iY 251 (343)
.+..+.+.+.+++.++.++||+|.|+|++|+|||.||+++|+||++||.+++. |+ ..+|.++++++++|+.+|+|+|
T Consensus 14 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Y 93 (256)
T 3hve_A 14 HAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIF 93 (256)
T ss_dssp THHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhcc
Confidence 35678899999999999999999999999999999999999999999999887 55 8899999999999999999999
Q ss_pred cCCCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhccCChhhHHHHHHHHhhcCchHHHHHHH
Q 019280 252 RDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHATELKAVCL 331 (343)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i~~~~~~~~l~~a~~~~~~~L~~~~~ 331 (343)
||.+.++..+ +.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++..|++.|.
T Consensus 94 t~~~~i~~~~-----------------v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~ 156 (256)
T 3hve_A 94 SGQIRLNEDT-----------------IQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLAT 156 (256)
T ss_dssp HSCCCCC-CC-----------------HHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCcccHhH-----------------HHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHH
Confidence 9999887776 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCC
Q 019280 332 RFAAENLAGTD 342 (343)
Q Consensus 332 ~~i~~~~~~v~ 342 (343)
+||.+||.+|.
T Consensus 157 ~~i~~~f~~v~ 167 (256)
T 3hve_A 157 EYLETHFRDVS 167 (256)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999987653
No 5
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=3.7e-29 Score=223.00 Aligned_cols=150 Identities=23% Similarity=0.341 Sum_probs=135.2
Q ss_pred CcccHHHHHHHchhcCCCCcEEEEeC---CeeEEeeehhhhccCHhHHhhcCCccccc-cceEEec------CCCHHHHH
Q 019280 175 PESDIGAHFGMLLDNAESSDITFDVA---GEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIIS------DLEPKVFK 244 (343)
Q Consensus 175 ~~~~~~~~~~~l~~~~~~~Dv~~~v~---~~~~~~hk~iL~~~S~~F~~~~~~~~~e~-~~~i~l~------~~~~~~~~ 244 (343)
.++.+.+.+.+++.++.++||+|.|+ |++|+|||.||+++|+||++||.++++|+ ..+|.|+ ++++++|+
T Consensus 15 h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~ 94 (279)
T 3i3n_A 15 HCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVE 94 (279)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHH
Confidence 34678889999999999999999998 99999999999999999999999999999 8999998 89999999
Q ss_pred HHhhhhccCCCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhccCChhhHHHHHHHHhhcCch
Q 019280 245 AMLHFIYRDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHAT 324 (343)
Q Consensus 245 ~~L~~iY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i~~~~~~~~l~~a~~~~~~ 324 (343)
.+|+|+|||.+.++..+ +.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++.
T Consensus 95 ~ll~~~Ytg~~~i~~~~-----------------v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~ 157 (279)
T 3i3n_A 95 AVIEYMYTGRIRVSTGS-----------------VHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLS 157 (279)
T ss_dssp HHHHHHHHSEEEEETTT-----------------HHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCH
T ss_pred HHHHhhCcCCcccCHHH-----------------HHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcH
Confidence 99999999999877665 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCC
Q 019280 325 ELKAVCLRFAAENLAGT 341 (343)
Q Consensus 325 ~L~~~~~~~i~~~~~~v 341 (343)
.|++.|.+||.+||.++
T Consensus 158 ~L~~~~~~~i~~~f~~v 174 (279)
T 3i3n_A 158 QLALKAADMIRRNFHKV 174 (279)
T ss_dssp HHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998765
No 6
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=99.94 E-value=1.5e-26 Score=185.77 Aligned_cols=135 Identities=29% Similarity=0.616 Sum_probs=112.2
Q ss_pred eecceeceEEEEEEcCccccccCCCCCeEeecccccCCe---eEEEEEEcCCCCCCCCCCeEEEEEEeeCC-CceeEEEE
Q 019280 17 SVTETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGGY---QWAIYFYPDGKNPEDNSAYVSVFIALANE-GTDVRALF 92 (343)
Q Consensus 17 ~~~~~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~gg~---~W~L~v~p~g~~~~~~~~~lsl~l~~~~~-~w~~~~~~ 92 (343)
.+.+++.++|+|+|+||+.+++ +.|+.+.||+|.+||+ +|+|.+||+|+.. ++.+|+|+||.|... +|++.|+|
T Consensus 4 ~m~~~~~~~~~w~I~~fs~~~~-~~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~-~~~~~lSlyL~l~~~~~w~v~a~f 81 (145)
T 3ivv_A 4 GSGKVVKFSYMWTINNFSFCRE-EMGEVIKSSTFSSGANDKLKWCLRVNPKGLDE-ESKDYLSLYLLLVSCPKSEVRAKF 81 (145)
T ss_dssp -CCCCCEEEEEEEESSGGGCCC-CTTCCEECCCEEESGGGCEEEEEEEETTCSSG-GGTTEEEEEEEEEECSSSEEEEEE
T ss_pred CCCcEEEEEEEEEEcCchHHhh-cCCCEEECCCcCCCCcCCceEEEEEEcCCCCC-CCCCeEEEEEEEcCCCCCcEEEEE
Confidence 3456788999999999999876 5688999999999996 9999999999874 357899999999764 79999999
Q ss_pred EEEEecCCCCCccceecccccccccCCeeecccCcccccccccchhcc--ccCcCCCCCcEEEEEeeeeee
Q 019280 93 ELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVV 161 (343)
Q Consensus 93 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~G~~~fi~~~~L--~~~~yl~~d~l~i~~~v~i~~ 161 (343)
+++|+|+.++...... ....+.|. ....|||.+|+++++| +.++||.||+++|+|+|.|++
T Consensus 82 ~l~llnq~~~~~~~~~-------~~~~~~F~-~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 82 KFSILNAKGEETKAME-------SQRAYRFV-QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp EEEEECTTSCEEEEEE-------CSSCEEEE-TTCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred EEEEEecCCCceeeec-------ccceEEec-CCCCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 9999999876543211 11345665 4678999999999999 568999999999999999864
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.93 E-value=4.2e-26 Score=177.17 Aligned_cols=110 Identities=26% Similarity=0.360 Sum_probs=100.5
Q ss_pred cccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccc-cceEEecCCCHHHHHHHhhhhccCC
Q 019280 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLHFIYRDT 254 (343)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~-~~~i~l~~~~~~~~~~~L~~iY~~~ 254 (343)
++.+.+.+.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.|+ ...|.++++++++|+.+|+|+|+|.
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~ 88 (120)
T 2if5_A 9 SSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTAT 88 (120)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCC
Confidence 567888999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred CCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHH
Q 019280 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHL 302 (343)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 302 (343)
++++..+ +.+|+.+|++|+++.|++.|+++|
T Consensus 89 ~~~~~~~-----------------~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 89 LTVSTAN-----------------VGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCCCGGG-----------------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccCHHH-----------------HHHHHHHHHHhCCHHHHHHHHHHh
Confidence 9887765 999999999999999999999987
No 8
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.93 E-value=1.5e-25 Score=175.75 Aligned_cols=115 Identities=26% Similarity=0.362 Sum_probs=107.2
Q ss_pred cCcccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEe-cCCCHHHHHHHhhhhcc
Q 019280 174 VPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIII-SDLEPKVFKAMLHFIYR 252 (343)
Q Consensus 174 ~~~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l-~~~~~~~~~~~L~~iY~ 252 (343)
..++.+.+.+.+++.++.++||+|.++|++|+|||.||+++||||++||.+++.|....|.| +++++++|+.+|+|+|+
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f~~ll~~~Yt 90 (127)
T 1r29_A 11 RHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYT 90 (127)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHHHHHHHHHHcC
Confidence 34577889999999999999999999999999999999999999999999988877788999 99999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhcc
Q 019280 253 DTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD 305 (343)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 305 (343)
|.++++..+ +.+|+.+|++|+++.|++.|+++|.++
T Consensus 91 g~~~~~~~~-----------------~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 91 SRLNLREGN-----------------IMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp SCCCCCTTT-----------------HHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCcCcCHHH-----------------HHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 999887765 999999999999999999999999763
No 9
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.93 E-value=7.4e-26 Score=190.04 Aligned_cols=140 Identities=24% Similarity=0.321 Sum_probs=110.8
Q ss_pred ceeceEEEEEEcCcccccc---CCCCCeEeecccccC--CeeEEEEEEcCCCCCCCCCCeEEEEEEeeCC------Ccee
Q 019280 20 ETVNGSHKFVIQGYSLAKG---MGIGKHIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDV 88 (343)
Q Consensus 20 ~~~~~~~~w~I~~fs~~~~---~~~~~~~~S~~f~~g--g~~W~L~v~p~g~~~~~~~~~lsl~l~~~~~------~w~~ 88 (343)
.+..|.|+|+|+|||.+++ ++.|+.+.||+|.+| ||+|+|.+||||++. ++++|+|+||.+.++ +|++
T Consensus 36 ~~~~g~~~w~I~nfS~~~~~~~~~~g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~-~~~~~lSlyL~l~~g~~D~~l~wp~ 114 (198)
T 4ghu_A 36 ASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGM-GKGTHLSLFFVIMRGEYDALLPWPF 114 (198)
T ss_dssp CCSSSEEEEEECCHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGG-GTTTEEEEEEEEECCTTGGGSCSSC
T ss_pred cccccEEEEEECCHHHHHhhhccCCCcEEECCCeEECCCCcEEEEEEEeCCCCC-CCCCeEEEEEEecCCccCCCCCceE
Confidence 3567999999999999886 677899999999999 999999999999874 357899999998742 5999
Q ss_pred EEEEEEEEecCCCCCccceecccc--cccccCCeeecccCcccccccccchhccccCcCCCCCcEEEEEeeeeee
Q 019280 89 RALFELTLLDQSGKGKHKVHSHFD--RSLESGPYTLKYRGSMWGYKRFFRRAMLETSDYLKDDCLKINCTVGVVV 161 (343)
Q Consensus 89 ~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~f~~~~~~~G~~~fi~~~~L~~~~yl~~d~l~i~~~v~i~~ 161 (343)
.++|+|+|+||.++..+.... +. .........+...+.+|||.+|+++++|++++||+||+++|+|+|.+..
T Consensus 115 ~a~~~l~Lldq~~~~~~~~~~-~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~ 188 (198)
T 4ghu_A 115 KQKVTLMLMDQGSSRRHLGDA-FKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 188 (198)
T ss_dssp CCCEEEEECCCSTTCCCEEEE-ECCCTTSGGGSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTBEEEEEEECCTT
T ss_pred EEEEEEEEEcCCCCccceEEE-eecCcccceecCCcccCcCCcCchhEeEHHHhhhcCCeeCCEEEEEEEEEecc
Confidence 999999999998754332111 10 0000111123334668999999999999888999999999999998764
No 10
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.93 E-value=8.2e-26 Score=179.84 Aligned_cols=120 Identities=19% Similarity=0.294 Sum_probs=110.2
Q ss_pred ccCcccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEec-CCCHHHHHHHhhhhc
Q 019280 173 QVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIIS-DLEPKVFKAMLHFIY 251 (343)
Q Consensus 173 ~~~~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~-~~~~~~~~~~L~~iY 251 (343)
..+++.+.+.+.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.+ ...|.++ +++++.|+.+|+|+|
T Consensus 17 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~v~~~~~~~lL~~~Y 95 (138)
T 2z8h_A 17 SVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA-ELTVTLPEEVTVKGFEPLIQFAY 95 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT-TEEEECCTTSCHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC-CceEEeCCCCCHHHHHHHHHHhc
Confidence 34567889999999999999999999999999999999999999999999988766 4678884 999999999999999
Q ss_pred cCCCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhccCChhh
Q 019280 252 RDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNS 310 (343)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i~~~~ 310 (343)
||.+.++..+ +.+|+.+|++|+++.|++.|+++|.+.++.+|
T Consensus 96 tg~~~i~~~~-----------------v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 96 TAKLILSKDN-----------------VDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HSCCCCCTTT-----------------HHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred CCCcccCHHH-----------------HHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 9999887776 99999999999999999999999999888765
No 11
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.92 E-value=2.5e-25 Score=169.74 Aligned_cols=104 Identities=34% Similarity=0.561 Sum_probs=92.1
Q ss_pred chhcCCCCcEEEEeCC----eeEEeeehhhhccCHhHHhhcCCccccccceEEecCCCHHHHHHHhhhhccCCCCCCCCC
Q 019280 186 LLDNAESSDITFDVAG----EKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTLTEDVDV 261 (343)
Q Consensus 186 l~~~~~~~Dv~~~v~~----~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~ 261 (343)
++.++.++||+|.+++ +.|+|||.||+++||||++||.+++.|+..+|.++++++++|+.+|+|+|+|.++++..+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~~ 81 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLEADT 81 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------CCEEEETTSCHHHHHHHHHHHHHCCCCCCTTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCCCeEEeCCCCHHHHHHHHHHHcCCCccCCHHH
Confidence 5678999999999998 899999999999999999999999888778899999999999999999999999887765
Q ss_pred CcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhccC
Q 019280 262 DVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDI 306 (343)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i 306 (343)
+.+|+.+|++|+++.|++.|+++|.+.+
T Consensus 82 -----------------~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 82 -----------------VLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp -----------------HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -----------------HHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 9999999999999999999999998653
No 12
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=99.92 E-value=2.6e-25 Score=184.29 Aligned_cols=137 Identities=26% Similarity=0.399 Sum_probs=108.4
Q ss_pred ceeceEEEEEEcCcccccc---CCCCCeEeecccccC--CeeEEEEEEcCCCCCCCCCCeEEEEEEeeCC------Ccee
Q 019280 20 ETVNGSHKFVIQGYSLAKG---MGIGKHIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDV 88 (343)
Q Consensus 20 ~~~~~~~~w~I~~fs~~~~---~~~~~~~~S~~f~~g--g~~W~L~v~p~g~~~~~~~~~lsl~l~~~~~------~w~~ 88 (343)
.+..+.|+|+|+||+.+++ .+.|..+.||+|.+| ||+|+|.+||+|++. ++++|+|+||.|.+. +|++
T Consensus 20 ~~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~~-~~~~~lSlyL~l~~~~~d~~l~W~v 98 (178)
T 4gjh_A 20 ACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGS-GKGTHLSLYFVVMRGEFDSLLQWPF 98 (178)
T ss_dssp CCSSSEEEEEECCHHHHHHHHHTTSCCCEECCCEESSTTSCEEEEEEETTCCGG-GTTTEEEEEEEEBCCTTGGGSCSSC
T ss_pred cccceEEEEEECCHHHHHhhhhcCCCcEEECCCeEeCCCCeEEEEEEEECCCCC-CCCCEEEEEEEEecCCCCcccCCce
Confidence 4677999999999999876 566679999999999 999999999999873 357999999999542 4999
Q ss_pred EEEEEEEEecCCCCCccceecccccccccCCeeec----ccCcccccccccchhcccc--CcCCCCCcEEEEEeeeee
Q 019280 89 RALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLK----YRGSMWGYKRFFRRAMLET--SDYLKDDCLKINCTVGVV 160 (343)
Q Consensus 89 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~~G~~~fi~~~~L~~--~~yl~~d~l~i~~~v~i~ 160 (343)
.++|+|+|+||.++..+... .+... ...+.|. ....+|||.+|+++++|++ ++||+||+++|+|+|.|.
T Consensus 99 ~a~~~l~Lldq~~~~~~~~~-~~~~~--~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~ 173 (178)
T 4gjh_A 99 RQRVTLMLLDQSGKKNHIVE-TFKAD--PNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLT 173 (178)
T ss_dssp CCEEEEEECCTTSSCCCEEE-EEECC--TTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECCT
T ss_pred EEEEEEEEEcCCCCcceeEE-eeccC--CccccccCCcccccCCcChhheeEHHHhhccccCcCcCCEEEEEEEEEec
Confidence 99999999999876532211 11000 0123343 2356899999999999986 899999999999999765
No 13
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.92 E-value=2.1e-25 Score=172.88 Aligned_cols=110 Identities=24% Similarity=0.292 Sum_probs=100.3
Q ss_pred cccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEecCCCHHHHHHHhhhhccCCC
Q 019280 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTL 255 (343)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~~~~~~~~~~L~~iY~~~~ 255 (343)
++.+.+++.+++.++.++||+|.++|++|+|||.||+++||||++||.+++ ..+|.|+++++++|+.+|+|+|||.+
T Consensus 8 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~~~~f~~ll~~iYtg~~ 84 (119)
T 3b84_A 8 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGFAEIFGLLLDFFYTGHL 84 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCCHHHHHHHHHHHcCCCC
Confidence 466788999999999999999999999999999999999999999998755 57899999999999999999999999
Q ss_pred CCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhcc
Q 019280 256 TEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD 305 (343)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 305 (343)
+++.++ +.+|+.+|++|+++.|++.|+++|.+.
T Consensus 85 ~~~~~~-----------------v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSGN-----------------RDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTTT-----------------HHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred ccCHHH-----------------HHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 887776 999999999999999999999998753
No 14
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.92 E-value=2e-25 Score=178.74 Aligned_cols=111 Identities=22% Similarity=0.358 Sum_probs=99.4
Q ss_pred cccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCcccc--c-cceEEecCCCHHHHHHHhhhhcc
Q 019280 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEE--D-KQEIIISDLEPKVFKAMLHFIYR 252 (343)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e--~-~~~i~l~~~~~~~~~~~L~~iY~ 252 (343)
...+.+++.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.+ + ..+|.|+++++++|+.+|+|+|+
T Consensus 31 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYt 110 (144)
T 2ppi_A 31 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 110 (144)
T ss_dssp HHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhC
Confidence 46788999999999999999999999999999999999999999999988876 4 78999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHh
Q 019280 253 DTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLC 303 (343)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 303 (343)
|.+.++..+ +.+|+.+|++|+++.|++.|+++|+
T Consensus 111 g~~~i~~~~-----------------v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 111 GQIRLNEDT-----------------IQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp SCCCCCTTT-----------------HHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCCCCCHHH-----------------HHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 999887765 9999999999999999999999863
No 15
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.92 E-value=4.7e-25 Score=170.18 Aligned_cols=109 Identities=21% Similarity=0.286 Sum_probs=99.7
Q ss_pred cccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEec--CCCHHHHHHHhhhhccC
Q 019280 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIIS--DLEPKVFKAMLHFIYRD 253 (343)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~--~~~~~~~~~~L~~iY~~ 253 (343)
+..+.+++.+++.++.++||+|.++|++|+|||.||+++|+||++||.++ +...|.|+ ++++++|+.+|+|+|+|
T Consensus 6 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~~~~f~~ll~~~Yt~ 82 (116)
T 2vpk_A 6 CEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVKADGFQKLLEFIYTG 82 (116)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCCHHHHHHHHHHHcCC
Confidence 45678899999999999999999999999999999999999999999875 34667777 99999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhc
Q 019280 254 TLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCK 304 (343)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 304 (343)
.++++..+ +.+|+.+|++|+++.|++.|+++|.+
T Consensus 83 ~~~~~~~~-----------------v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 83 TLNLDSWN-----------------VKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp CCCCCTTT-----------------HHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CcccCHHH-----------------HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99887765 99999999999999999999999853
No 16
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=99.92 E-value=1.1e-24 Score=177.70 Aligned_cols=138 Identities=22% Similarity=0.335 Sum_probs=104.1
Q ss_pred eceEEEEEEcCcccccc-CCCCC--eEeecccccC--CeeEEEEEEcCCCCCCCCCCeEEEEEEeeCC------CceeEE
Q 019280 22 VNGSHKFVIQGYSLAKG-MGIGK--HIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDVRA 90 (343)
Q Consensus 22 ~~~~~~w~I~~fs~~~~-~~~~~--~~~S~~f~~g--g~~W~L~v~p~g~~~~~~~~~lsl~l~~~~~------~w~~~~ 90 (343)
..++|+|+|+|||.+++ +..|+ .+.||+|.+| ||+|+|++||+|++.+.+++|+|+||.+.+. +|++.+
T Consensus 3 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yP~G~~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a 82 (160)
T 1lb6_A 3 CNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQG 82 (160)
T ss_dssp CCEEEEEEECCHHHHHHHHHTTCCEEEECCCEESSSSCCEEEEEEEECCTTCTTTTTEEEEEEEEECCTTGGGSCSSCCS
T ss_pred cCcEEEEEECCHHHHHHhhhcCCCeEEECcCeecCCCCeeEEEEEEecCCCCCCCCCEEEEEEEEeecCCCccCCCceee
Confidence 46899999999999875 45666 8999999999 9999999999998743347899999998642 399999
Q ss_pred EEEEEEecCCCCCcc-ceecccccccccCCeeec-----ccCcccccccccchhccccCcCCCCCcEEEEEeeeeee
Q 019280 91 LFELTLLDQSGKGKH-KVHSHFDRSLESGPYTLK-----YRGSMWGYKRFFRRAMLETSDYLKDDCLKINCTVGVVV 161 (343)
Q Consensus 91 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~f~-----~~~~~~G~~~fi~~~~L~~~~yl~~d~l~i~~~v~i~~ 161 (343)
+|+|+|+||.+.... .....+... .....|. ....+|||.+|+++++|++++||+||+++|+|+|.++.
T Consensus 83 ~~~l~lldq~~~~~~~~~~~~~~~~--~~~~~f~~p~~~~~~~~~G~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~~ 157 (160)
T 1lb6_A 83 TIRLTILDQSEAPVRQNHEEIMDAK--PELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRF 157 (160)
T ss_dssp EEEEEECCCSCTTSCCCEEEEEECC--TTSGGGSCCSSSBCSEEEEEEEEEEGGGGGTSCCCBTTBEEEEEEEEC--
T ss_pred eEEEEEEcCCCccccccceEEeecC--CcchhccCCcccCCCCCcCEeeEeEHHHhhhCCCccCCEEEEEEEEEEee
Confidence 999999999765321 110011000 0011121 12347999999999999988999999999999999864
No 17
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.92 E-value=4.8e-25 Score=174.63 Aligned_cols=114 Identities=21% Similarity=0.260 Sum_probs=98.9
Q ss_pred cccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEecCCCHHHHHHHhhhhccCCC
Q 019280 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTL 255 (343)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~~~~~~~~~~L~~iY~~~~ 255 (343)
...+.+.+.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++ ..+|.|+++++++|+.+|+|+|+|++
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~~~~f~~lL~fiYtg~~ 85 (135)
T 2yy9_A 9 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGFAEIFGLLLDFFYTGHL 85 (135)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCCHHHHHHHHHHHhCCCC
Confidence 466788999999999999999999999999999999999999999998765 46799999999999999999999999
Q ss_pred CCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhccCChh
Q 019280 256 TEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVN 309 (343)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i~~~ 309 (343)
.+..++ +.+|+.+|++|+++.|++.|+++|.+.+...
T Consensus 86 ~i~~~~-----------------v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 86 ALTSGN-----------------RDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp CCCTTT-----------------HHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCCHHH-----------------HHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 887765 9999999999999999999999998876543
No 18
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.92 E-value=9.5e-25 Score=169.67 Aligned_cols=110 Identities=25% Similarity=0.338 Sum_probs=101.8
Q ss_pred CcccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEecCCCHHHHHHHhhhhccCC
Q 019280 175 PESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDT 254 (343)
Q Consensus 175 ~~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~~~~~~~~~~L~~iY~~~ 254 (343)
.++.+.+.+.+++.++.++||+|.++|++|+|||.||+++||||++||.++ ..+|.++++++++|+.+|+|+|||.
T Consensus 11 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~~~~f~~ll~~~Ytg~ 86 (121)
T 1buo_A 11 HPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLSPKTFQQILEYAYTAT 86 (121)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCCHHHHHHHHHhhcCCC
Confidence 356788999999999999999999999999999999999999999999753 5689999999999999999999999
Q ss_pred CCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhcc
Q 019280 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD 305 (343)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 305 (343)
++++..+ +.+|+.+|++|+++.|++.|+++|.+.
T Consensus 87 ~~~~~~~-----------------~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 87 LQAKAED-----------------LDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCCGGG-----------------HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cCCCHHH-----------------HHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 9887776 999999999999999999999999754
No 19
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=99.91 E-value=2.3e-24 Score=175.01 Aligned_cols=128 Identities=15% Similarity=0.243 Sum_probs=102.6
Q ss_pred eeceEEEEEEcCccccccCCCCCeEeecccccCCeeEEEEEEcCCCCCCCCCCeEEEEEEeeCC----CceeEEEEEEEE
Q 019280 21 TVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALANE----GTDVRALFELTL 96 (343)
Q Consensus 21 ~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~gg~~W~L~v~p~g~~~~~~~~~lsl~l~~~~~----~w~~~~~~~~~l 96 (343)
...++|+|+|+||+.++ +.++|++|.+||++|+|.+||+|+...++++|+|+||.|... +|.+.|+|+++|
T Consensus 16 ~~~~~~~w~I~nfS~~~-----~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~~~l~l 90 (155)
T 2foj_A 16 RSEATFQFTVERFSRLS-----ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKI 90 (155)
T ss_dssp CSEEEEEEEESSGGGCC-----SCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTTCCCSSCEEEEEEEEEE
T ss_pred CCCcEEEEEECChhhcC-----CceEcCCEEECCccEEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCEEEEEEEEEE
Confidence 34699999999999985 679999999999999999999997632357899999999653 499999999999
Q ss_pred ecCCCCCccceecccccccccCCeeecccCcccccccccchhccc--cCcCCCCCcEEEEEeeeeee
Q 019280 97 LDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAMLE--TSDYLKDDCLKINCTVGVVV 161 (343)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~G~~~fi~~~~L~--~~~yl~~d~l~i~~~v~i~~ 161 (343)
+|+++....... ...+.|.....+|||.+|++|++|. .++||.||+++|+|+|.|.+
T Consensus 91 ~~~~~~~~~~~~--------~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V~~ 149 (155)
T 2foj_A 91 INYRDDEKSFSR--------RISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA 149 (155)
T ss_dssp CCSSCGGGCEEE--------EEEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEECC
T ss_pred EcCCCCcceEEe--------ccEEEeCCCCCCEeECCeEEHHHhcCcCCCceECCEEEEEEEEEEeC
Confidence 999876422111 1235566556789999999999995 68999999999999999854
No 20
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.90 E-value=1.9e-24 Score=181.09 Aligned_cols=135 Identities=24% Similarity=0.381 Sum_probs=105.3
Q ss_pred eceEEEEEEcCcccccc-CCCCC--eEeecccccC--CeeEEEEEEcCCCCCCCCCCeEEEEEEeeCC------CceeEE
Q 019280 22 VNGSHKFVIQGYSLAKG-MGIGK--HIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDVRA 90 (343)
Q Consensus 22 ~~~~~~w~I~~fs~~~~-~~~~~--~~~S~~f~~g--g~~W~L~v~p~g~~~~~~~~~lsl~l~~~~~------~w~~~~ 90 (343)
..++|+|+|+|||.+++ +..|+ .+.||+|.+| ||+|+|++||||++. ++++|+|+||.+.++ +|++.+
T Consensus 38 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gykw~i~~yPnG~~~-~~~~~lSlyL~l~~~~~d~~l~wp~~a 116 (192)
T 2gkw_A 38 YNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGM-GKGTHLSLFFVIMRGEYDALLPWPFKQ 116 (192)
T ss_dssp CSSEEEEEEECHHHHHHHHHHTSCSCEECCCEESSTTSCEEEEEEETTCCGG-GTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred cCcEEEEEECCHHHHHHHhhcCCCceEEcccEEECCCCcEEEEEEEeCCCCC-CCCCEEEEEEEEecCCCCccCCCcEEE
Confidence 67999999999999873 45566 6999999999 999999999999873 367999999998642 499999
Q ss_pred EEEEEEecCCCCCccceecccccccccCCeeec----ccCcccccccccchhccccCcCCCCCcEEEEEeeeee
Q 019280 91 LFELTLLDQSGKGKHKVHSHFDRSLESGPYTLK----YRGSMWGYKRFFRRAMLETSDYLKDDCLKINCTVGVV 160 (343)
Q Consensus 91 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~~G~~~fi~~~~L~~~~yl~~d~l~i~~~v~i~ 160 (343)
+|+|+|+|+.+...+.... +... .....|. ..+.+|||++|+++++|++++||+||+++|+|+|.+.
T Consensus 117 ~~~l~lldq~~~~~~~~~~-~~~~--~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v~ 187 (192)
T 2gkw_A 117 KVTLMLMDQGSSRRHLGDA-FKPD--PNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTS 187 (192)
T ss_dssp CEEEEECCCSTTCCCEEEE-ECCC--TTCTTSSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTEEEEEEEECCT
T ss_pred EEEEEEECCCCCccceEEE-EecC--CCcccccCCCCCCcCCCChHHEeEHHHhCcCCCeeCCEEEEEEEEEcC
Confidence 9999999998765432111 1000 0112232 1245799999999999988899999999999999764
No 21
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.90 E-value=1.5e-24 Score=167.94 Aligned_cols=108 Identities=24% Similarity=0.301 Sum_probs=99.2
Q ss_pred CcccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEecCCCHHHHHHHhhhhccCC
Q 019280 175 PESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDT 254 (343)
Q Consensus 175 ~~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~~~~~~~~~~L~~iY~~~ 254 (343)
..+.+.+.+++++.++.++||+|.++|++|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||.
T Consensus 10 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~~~~f~~ll~~~Ytg~ 85 (119)
T 2q81_A 10 HSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISNAAGLGQVLEFMYTAK 85 (119)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 356788999999999999999999999999999999999999999999742 4567888999999999999999999
Q ss_pred CCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHh
Q 019280 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLC 303 (343)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 303 (343)
+.++..+ +.+|+.+|++|+++.|++.|+++|.
T Consensus 86 ~~i~~~~-----------------~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 86 LSLSPEN-----------------VDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCCCTTT-----------------HHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CccCHHH-----------------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9887775 9999999999999999999999985
No 22
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=99.90 E-value=2.6e-24 Score=180.66 Aligned_cols=135 Identities=20% Similarity=0.304 Sum_probs=105.1
Q ss_pred eeceEEEEEEcCcccccc-CCCCC--eEeeccccc--CCeeEEEEEEcCCCCCCCCCCeEEEEEEeeC------CCceeE
Q 019280 21 TVNGSHKFVIQGYSLAKG-MGIGK--HIASDNFTV--GGYQWAIYFYPDGKNPEDNSAYVSVFIALAN------EGTDVR 89 (343)
Q Consensus 21 ~~~~~~~w~I~~fs~~~~-~~~~~--~~~S~~f~~--gg~~W~L~v~p~g~~~~~~~~~lsl~l~~~~------~~w~~~ 89 (343)
...++|+|+|+|||.+++ ...|+ .++||+|.+ |||+|+|.+||+|++. ++++|+|+||.+.+ .+|++.
T Consensus 40 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~v~~gG~~W~i~~yP~G~~~-~~~~~lSlyL~l~~~~~~~~~~W~~~ 118 (192)
T 1ca9_A 40 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGT-GRGTHLSLFFVVMKGPNDALLRWPFN 118 (192)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGG-GTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCceEEEEECCHHHHHHHhhcCCCceEECceEEeCCCCeEEEEEEEeCCCCC-CCCCEEEEEEEEccCCCCCcCCCceE
Confidence 467999999999999875 34555 799999999 9999999999999863 35799999999865 249999
Q ss_pred EEEEEEEecCCCCCccceecccccccccCCeeec----ccCcccccccccchhccc-cCcCCCCCcEEEEEeeeee
Q 019280 90 ALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLK----YRGSMWGYKRFFRRAMLE-TSDYLKDDCLKINCTVGVV 160 (343)
Q Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~~G~~~fi~~~~L~-~~~yl~~d~l~i~~~v~i~ 160 (343)
++|+++|+|+++....... +... .....|. ....+|||.+|+++++|+ .++||.||+++|+|+|.|.
T Consensus 119 a~~~l~lldq~~~~~~~~~--~~~~--~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~V~ 190 (192)
T 1ca9_A 119 QKVTLMLLDQNNREHVIDA--FRPD--VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLT 190 (192)
T ss_dssp CCEEEEECCTTSSCCEEEE--ECCC--TTSGGGSCCSSSBCCCEEEEEEEETHHHHSSCSSCBTTEEEEEEEECCT
T ss_pred EEEEEEEECCCCCceeeEe--eccC--CchhhhcCCccCCCCCcChhheeEHHHhhhccCCEeCCEEEEEEEEEec
Confidence 9999999999876321111 0000 0011221 235689999999999998 7899999999999999874
No 23
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.90 E-value=3.7e-25 Score=172.72 Aligned_cols=112 Identities=21% Similarity=0.331 Sum_probs=100.0
Q ss_pred cCcccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEe-cCCCHHHHHHHhhhhcc
Q 019280 174 VPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIII-SDLEPKVFKAMLHFIYR 252 (343)
Q Consensus 174 ~~~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l-~~~~~~~~~~~L~~iY~ 252 (343)
.+++.+.+.+.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.+. ..|.+ ++++++.|+.+|+|+||
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~-~~i~l~~~v~~~~f~~lL~~iYt 89 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE-LNITLPEEVTVKGFEPLIQFAYT 89 (124)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C-EEEECCTTSCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC-ceEeecCCcCHHHHHHHHHHhcC
Confidence 34577889999999999999999999999999999999999999999999887664 67888 59999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHh
Q 019280 253 DTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLC 303 (343)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~ 303 (343)
|.++++..+ +.+|+.+|++|+++.|++.|+++|.
T Consensus 90 g~~~i~~~~-----------------v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 90 AKLILSKEN-----------------VDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp SEEEEETTT-----------------HHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred CCcccCHHH-----------------HHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 999877665 9999999999999999999999874
No 24
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=99.90 E-value=7.8e-24 Score=174.18 Aligned_cols=135 Identities=20% Similarity=0.295 Sum_probs=103.9
Q ss_pred eeceEEEEEEcCccccccC-CCCC--eEeecccc--cCCeeEEEEEEcCCCCCCCCCCeEEEEEEeeC------CCceeE
Q 019280 21 TVNGSHKFVIQGYSLAKGM-GIGK--HIASDNFT--VGGYQWAIYFYPDGKNPEDNSAYVSVFIALAN------EGTDVR 89 (343)
Q Consensus 21 ~~~~~~~w~I~~fs~~~~~-~~~~--~~~S~~f~--~gg~~W~L~v~p~g~~~~~~~~~lsl~l~~~~------~~w~~~ 89 (343)
...++|+|+|+||+.+++. ..|+ .+.||+|. +|||+|+|++||+|++. ++++|+|+||.+.+ .+|++.
T Consensus 16 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~~~~gG~~W~i~~yP~G~~~-~~~~~lSlyL~l~~~~~~~~~~w~~~ 94 (168)
T 1d00_A 16 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGT-GRGTHLSLFFVVMKGPNDALLRWPFN 94 (168)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGG-GTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCCEEEEEECCHHHHHHHhhcCCCeEEECCCeecCCCCEEEEEEEEeCCCCC-CCCcEEEEEEEEecCCCCccCCCceE
Confidence 4679999999999998763 4566 49999995 89999999999999863 35799999999865 259999
Q ss_pred EEEEEEEecCCCCCccceecccccccccCCeeec----ccCcccccccccchhccccC-cCCCCCcEEEEEeeeee
Q 019280 90 ALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLK----YRGSMWGYKRFFRRAMLETS-DYLKDDCLKINCTVGVV 160 (343)
Q Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~~G~~~fi~~~~L~~~-~yl~~d~l~i~~~v~i~ 160 (343)
++|+++|+|+++....... +... .....|. ..+.+|||.+|+++++|+++ +||.||+++|+|+|.|.
T Consensus 95 ~~~~l~ll~q~~~~~~~~~--~~~~--~~~~~f~~p~~~~~~~~G~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~v~ 166 (168)
T 1d00_A 95 QKVTLMLLDQNNREHVIDA--FRPD--VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLT 166 (168)
T ss_dssp CCEEEEECCTTSSCCEEEE--ECCC--TTSGGGSCCSSSBCCCEEEEEEEETTTTTSSSSSSBTTEEEEEEEECCT
T ss_pred EEEEEEEECCCCCccceec--cccC--cchhhccCCCcCCCCCcCcceEeEHHHhcccCCceeCCEEEEEEEEEec
Confidence 9999999999875421110 0000 0011222 23567999999999999865 99999999999999864
No 25
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.90 E-value=6.6e-25 Score=171.64 Aligned_cols=109 Identities=21% Similarity=0.284 Sum_probs=101.1
Q ss_pred cccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEecC-CCHHHHHHHhhhhccCC
Q 019280 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISD-LEPKVFKAMLHFIYRDT 254 (343)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~-~~~~~~~~~L~~iY~~~ 254 (343)
...+.+.+.+++.++.++||+|.++|++|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|+|+|+|.
T Consensus 16 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~~~~f~~~l~~iYtg~ 94 (125)
T 3ohu_A 16 CTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVTARGFGPLLQFAYTAK 94 (125)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCCHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCCHHHHHHHHHhHcCCc
Confidence 46788899999999999999999999999999999999999999999988776 68899998 99999999999999999
Q ss_pred CCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHH
Q 019280 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHL 302 (343)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l 302 (343)
+.++..+ +.+|+.+|++|+++.|++.|+++|
T Consensus 95 ~~~~~~~-----------------v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 95 LLLSREN-----------------IREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp EEECTTT-----------------HHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred eEECHHH-----------------HHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9877765 999999999999999999998764
No 26
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.8e-24 Score=170.08 Aligned_cols=110 Identities=23% Similarity=0.300 Sum_probs=94.6
Q ss_pred cccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEec-CCCHHHHHHHhhhhccCC
Q 019280 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIIS-DLEPKVFKAMLHFIYRDT 254 (343)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~-~~~~~~~~~~L~~iY~~~ 254 (343)
...+.+.+.+++.++.++||+|.|+|+.|+|||.||+++|+||++||.++ ...+|.|+ ++++++|+.+|+|+|+|.
T Consensus 17 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~~~~f~~ll~~iYtg~ 93 (129)
T 3ga1_A 17 GNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQPQSFQQILSFCYTGR 93 (129)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCCHHHHHHHHHHHhCCc
Confidence 46678889999999999999999999999999999999999999999754 36789996 999999999999999999
Q ss_pred CCCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhcc
Q 019280 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD 305 (343)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 305 (343)
+.++.++ +.+|+.+|++|+++.|++.|+++|.+.
T Consensus 94 ~~i~~~~-----------------~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 94 LSMNVGD-----------------QDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp EECCTTT-----------------HHHHHHHHHHTTBTTSSCC--------
T ss_pred cccCHHH-----------------HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9887776 999999999999999999999999864
No 27
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=99.89 E-value=8.6e-24 Score=181.74 Aligned_cols=140 Identities=23% Similarity=0.301 Sum_probs=106.1
Q ss_pred eeceEEEEEEcCcccccc-CCCC--CeEeecccccC--CeeEEEEEEcCCCCCCCCCCeEEEEEEeeCC------CceeE
Q 019280 21 TVNGSHKFVIQGYSLAKG-MGIG--KHIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDVR 89 (343)
Q Consensus 21 ~~~~~~~w~I~~fs~~~~-~~~~--~~~~S~~f~~g--g~~W~L~v~p~g~~~~~~~~~lsl~l~~~~~------~w~~~ 89 (343)
+..+.|+|+|+|||.+++ +..| ..+.||+|.+| ||+|+|++||||++. +.++|+|+||.+.++ +|++.
T Consensus 73 ~~~g~~~wkI~nfS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yPnG~~~-~~~~~lSlyL~l~~~~~d~~l~Wp~~ 151 (228)
T 1flk_A 73 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGM-GKGTHLSLFFVIMRGEYDALLPWPFK 151 (228)
T ss_dssp CSSSEEEEEEECHHHHHHHHHTTSCCCEECCCEESSTTSCEECEEEETTCCGG-GTTTEEEEEECCBCCTTTTSSCSSCC
T ss_pred CcCcEEEEEECCHHHHHHHhhcCCCeeEECceEEeCCCCcEEEEEEEcCCCCC-CCCCEEEEEEEEecCCccccCCCcEE
Confidence 467999999999998875 3444 48999999999 999999999999874 467999999998642 49999
Q ss_pred EEEEEEEecCCCCCccceec-ccccccccCCeeecccCcccccccccchhccccCcCCCCCcEEEEEeeeeee
Q 019280 90 ALFELTLLDQSGKGKHKVHS-HFDRSLESGPYTLKYRGSMWGYKRFFRRAMLETSDYLKDDCLKINCTVGVVV 161 (343)
Q Consensus 90 ~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~~~~~G~~~fi~~~~L~~~~yl~~d~l~i~~~v~i~~ 161 (343)
++|+|+|+|+.+...+.... ................+.+|||++|+++++|++++||.||+++|+|+|.+..
T Consensus 152 a~~~l~lldq~~~~~~~~~~~~~~~~~~~F~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~ 224 (228)
T 1flk_A 152 QKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 224 (228)
T ss_dssp CCEEEEECCCSSSCCCEEEEECCCTTCTTSSSCSSSBCCCCSEEEEEEHHHHSSSTTCCSSEEEEEEECCCTT
T ss_pred EEEEEEEEcCCCCccceeeeecCCCccccccCCccCCCCCcCHHHeeEHHHHccCCCccCCEEEEEEEEEccc
Confidence 99999999998765422110 0000000000001123567999999999999888999999999999998753
No 28
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.87 E-value=1.7e-22 Score=156.03 Aligned_cols=102 Identities=23% Similarity=0.297 Sum_probs=89.5
Q ss_pred cccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEecCCCHHHHHHHhhhhccCCC
Q 019280 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTL 255 (343)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~~~~~~~~~~L~~iY~~~~ 255 (343)
...+.+.+. ..++.++||+|.|+|++|+|||.|||++|+||++ ....|.++++++++|+.+|+|+|||.+
T Consensus 16 ~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~~~~f~~ll~fiYtg~~ 85 (119)
T 3m5b_A 16 SDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGISPSTFAQLLNFVYGESV 85 (119)
T ss_dssp TCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCCHHHHHHHHHHHTTCCE
T ss_pred hHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCCHHHHHHHHHHHcCCCc
Confidence 455566665 3578999999999999999999999999999985 146789999999999999999999999
Q ss_pred CCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhc
Q 019280 256 TEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCK 304 (343)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 304 (343)
.++.++ +.+||.+|++|+++.|++.|++++..
T Consensus 86 ~i~~~~-----------------v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ELQPGE-----------------LRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EECGGG-----------------HHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCHHH-----------------HHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 887776 99999999999999999999998764
No 29
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.86 E-value=5.7e-22 Score=152.58 Aligned_cols=100 Identities=22% Similarity=0.331 Sum_probs=91.4
Q ss_pred cccHHHHHHHchhcCCCCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccccccceEEecCCCHHHHHHHhhhhccCCC
Q 019280 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTL 255 (343)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~~~~~~~~~~L~~iY~~~~ 255 (343)
.+.+.+.+.+++.++.++||+|.++|+.|+|||.||+++|+||++||.++ ..+|.++++++++|+.+|+|+|||++
T Consensus 15 ~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~~~~f~~~l~~~Ytg~~ 90 (116)
T 3fkc_A 15 SGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIRAEIFAEILNYIYSSKI 90 (116)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSCHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCCHHHHHHHHHhhcCCCc
Confidence 46788899999999999999999999999999999999999999999764 56899999999999999999999998
Q ss_pred -CCCCCCCcCCCCCCCCCcchHHHHHHHHHHHhhhChHhHHH
Q 019280 256 -TEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRL 296 (343)
Q Consensus 256 -~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~l~~ 296 (343)
.++..+ +.+|+.+|++|+++.|++
T Consensus 91 ~~~~~~~-----------------~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 91 VRVRSDL-----------------LDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CSCCHHH-----------------HHHHHHHHHHHTCHHHHT
T ss_pred CCCCHHH-----------------HHHHHHHHHHhCccccCc
Confidence 465554 999999999999999875
No 30
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.82 E-value=2.9e-20 Score=179.55 Aligned_cols=128 Identities=14% Similarity=0.227 Sum_probs=101.4
Q ss_pred eeceEEEEEEcCccccccCCCCCeEeecccccCCeeEEEEEEcCCCCCCCCCCeEEEEEEeeC----CCceeEEEEEEEE
Q 019280 21 TVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALAN----EGTDVRALFELTL 96 (343)
Q Consensus 21 ~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~gg~~W~L~v~p~g~~~~~~~~~lsl~l~~~~----~~w~~~~~~~~~l 96 (343)
...++|+|+|+|||.+++ .++|++|.+||++|+|.+||+|+..+++++|+|+||.|.. .+|.+.|+|+++|
T Consensus 28 ~~~~~~~w~I~nfS~~~~-----~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~f~l~l 102 (522)
T 2f1z_A 28 RSEATFQFTVERFSRLSE-----SVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKI 102 (522)
T ss_dssp CSEEEEEEEESSCTTCCS-----CEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTCCCSSCBEEEEEEEEE
T ss_pred cCCcEEEEEECChhhcCC-----ceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCCCCCCCceEEEEEEEEE
Confidence 457999999999999973 7899999999999999999999754336789999999964 3599999999999
Q ss_pred ecCCCCCccceecccccccccCCeeecccCcccccccccchhcc--ccCcCCCCCcEEEEEeeeeee
Q 019280 97 LDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVV 161 (343)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~G~~~fi~~~~L--~~~~yl~~d~l~i~~~v~i~~ 161 (343)
+|+.+...... ....+.|......|||.+|+++++| +.++||.||+++|+|.|.+..
T Consensus 103 ~n~~~~~~~~~--------~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v~~ 161 (522)
T 2f1z_A 103 INYRDDEKSFS--------RRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA 161 (522)
T ss_dssp CCTTCGGGCEE--------EECCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEECC
T ss_pred EcCCCCcccee--------ccceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeeccc
Confidence 99876443211 1134667666778999999999999 568999999999999998864
No 31
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.48 E-value=1.2e-13 Score=111.63 Aligned_cols=131 Identities=13% Similarity=0.206 Sum_probs=93.2
Q ss_pred EEEEe-CCeeEEeeehhhhccCHhHHhhcCC-ccc-cc-cceEEecCCCHHHHHHHhhhhccCCCCCCCCCCc-CC-CCC
Q 019280 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFD-ELE-ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDV-AT-PSS 268 (343)
Q Consensus 195 v~~~v-~~~~~~~hk~iL~~~S~~F~~~~~~-~~~-e~-~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~~~-~~-~~~ 268 (343)
|+|+. +|+.|.|||.+ |+.|++|++||.+ ++. |+ ...|+|++++..+++.+++|+|+..-........ .. ...
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 67765 79999999999 8999999999987 666 66 7899999999999999999999987322110000 00 000
Q ss_pred C--CC-----CcchHHHHHHHHHHHhhhChHhHHHHHHHHHhc---cCChhhHHHHHHHHhhcCchHH
Q 019280 269 S--CM-----SSVSDTLTAKLLAAADRYGLERLRLMCGSHLCK---DISVNSVAKILSLADEHHATEL 326 (343)
Q Consensus 269 ~--~~-----~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~---~i~~~~~~~~l~~a~~~~~~~L 326 (343)
. .. -......+.+|+.||++++++.|.++|.+++.. ..+++.+..++.+...+...+.
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe 149 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEE 149 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHH
Confidence 0 00 012356699999999999999999999999854 4467777777777766665544
No 32
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=99.41 E-value=1.1e-12 Score=125.87 Aligned_cols=135 Identities=24% Similarity=0.365 Sum_probs=104.1
Q ss_pred ecceeceEEEEEEcCccccccCCCCCeEeeccccc-CCeeEEEEEEcCCCCCCCCCCeEEEEEEeeCCC------cee-E
Q 019280 18 VTETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTV-GGYQWAIYFYPDGKNPEDNSAYVSVFIALANEG------TDV-R 89 (343)
Q Consensus 18 ~~~~~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~~-gg~~W~L~v~p~g~~~~~~~~~lsl~l~~~~~~------w~~-~ 89 (343)
.++..+..++|+|.||+.+.+. .+..+.||+|+. .||.++|.+++++ ..|+|+|+++.++. |++ .
T Consensus 400 ~t~G~CP~~vw~i~nfs~~l~~-~~~~~~Sp~Fys~~GY~~~v~l~~~~------~~~~~~~~~l~sG~~D~~L~WP~~~ 472 (592)
T 4gwm_A 400 LSETRCPHHIWHIRNFTQFIGS-PNGTLYSPPFYSSKGYAFQIYLNLAH------VTNAGIYFHLISGANDDQLQWPCPW 472 (592)
T ss_dssp EESSCCCSEEEEECSCGGGTTC-TTCEEECCCEECTTSCEEEEEEECCS------SSEEEEEEEEECCTTGGGSCSSCCS
T ss_pred EeeCCCCCCceeecCHHHhhcC-CCCceeCCCccCCCCeEEEEEEecCC------CceEEEEEEEecCCCCCCccCCCCC
Confidence 4566777899999999998763 567899999974 5999999999874 47899999998743 999 4
Q ss_pred EEEEEEEecCCCCCccceecccccccccCC--------e------------ee-----cccCcccccccccchhccccCc
Q 019280 90 ALFELTLLDQSGKGKHKVHSHFDRSLESGP--------Y------------TL-----KYRGSMWGYKRFFRRAMLETSD 144 (343)
Q Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~------------~f-----~~~~~~~G~~~fi~~~~L~~~~ 144 (343)
-++++.|+||+.+...+++.. +++...+ . .| ..++.+|||+.|++++.|.++.
T Consensus 473 ~q~t~~llDQ~pd~~~rms~~--~s~ttdp~~~~~~~~~~w~~P~~~g~~~~~~~~~~~~r~~~~G~~~fish~~l~~r~ 550 (592)
T 4gwm_A 473 QQATMTLLDQNPDIRQRMSNQ--RSITTDPFMTTDNGNYFWDRPSKVGTVALFSNGTQFRRGGGYGTSAFITHERLKSRD 550 (592)
T ss_dssp EEEEEEECCCCSSGGGCCCEE--EEEECCTTCBCTTSCBTTSCHHHHCEEEECTTCCEEEEEEEEEEEEEEEHHHHTSTT
T ss_pred CEEEEEEeCCCCChHhcCcee--EEEEcCCcccCcccccccCCcccccccccccCCcceeecCCcCccccccHHHHhhcC
Confidence 789999999987766555432 1111110 0 01 1234579999999999999889
Q ss_pred CCCCCcEEEEEeeeeee
Q 019280 145 YLKDDCLKINCTVGVVV 161 (343)
Q Consensus 145 yl~~d~l~i~~~v~i~~ 161 (343)
||+||.+.|.++|+-+.
T Consensus 551 fiK~d~~~i~~~~eD~~ 567 (592)
T 4gwm_A 551 FIKGDDVYILLTVEDIS 567 (592)
T ss_dssp SSBTTBEEEEEEEEECG
T ss_pred cccCCeEEEEEEEEeCc
Confidence 99999999999997665
No 33
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.21 E-value=4e-11 Score=88.32 Aligned_cols=78 Identities=14% Similarity=0.256 Sum_probs=61.4
Q ss_pred EEEEe-CCeeEEeeehhhhccCHhHHhhcCC--ccccc-cceEEecCCCHHHHHHHhhhhc-----c---CCCC---CCC
Q 019280 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFD--ELEED-KQEIIISDLEPKVFKAMLHFIY-----R---DTLT---EDV 259 (343)
Q Consensus 195 v~~~v-~~~~~~~hk~iL~~~S~~F~~~~~~--~~~e~-~~~i~l~~~~~~~~~~~L~~iY-----~---~~~~---~~~ 259 (343)
|+|+. +|+.|.|||.+ |+.|++|++||.+ .+.|+ ...|+|+++++.+++.+++|+| + +.++ ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 45554 78999999999 9999999999986 67777 8899999999999999999999 4 4444 333
Q ss_pred CCCcCCCCCCCCCcchHHHHHHHHHHHhhhC
Q 019280 260 DVDVATPSSSCMSSVSDTLTAKLLAAADRYG 290 (343)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~ 290 (343)
++ +.+|+.||++++
T Consensus 83 ~~-----------------l~eLl~AAnyL~ 96 (97)
T 4ajy_C 83 EI-----------------ALELLMAANFLD 96 (97)
T ss_dssp GG-----------------HHHHHHHHHHHT
T ss_pred HH-----------------HHHHHHHHhhhC
Confidence 33 999999999986
No 34
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.06 E-value=2.9e-10 Score=89.70 Aligned_cols=113 Identities=13% Similarity=0.142 Sum_probs=80.5
Q ss_pred EEEEe-CCeeEEeeehhhhccCHhHHhhcCCccccccceEEecCCCHHHHHHHhhhhccCCCCCCCCCC-cCC-CCCC--
Q 019280 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVD-VAT-PSSS-- 269 (343)
Q Consensus 195 v~~~v-~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~~-~~~-~~~~-- 269 (343)
|+|.. +|+.|.+|+.+ |..|+++++||.+.- ...|+|++++..+++.+++|+|...-....... ... ....
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i 79 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDI 79 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCCHHHHHHHHHHHHHHTTCC----------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhh
Confidence 66776 88999999998 889999999996421 458999999999999999999886532111000 000 0000
Q ss_pred CC-----CcchHHHHHHHHHHHhhhChHhHHHHHHHHHhccCChhhH
Q 019280 270 CM-----SSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSV 311 (343)
Q Consensus 270 ~~-----~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i~~~~~ 311 (343)
.. -......+.+|+.||++++++.|.++|.+++...+...++
T Consensus 80 ~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ 126 (141)
T 1fs1_B 80 PVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTP 126 (141)
T ss_dssp -HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCH
T ss_pred hHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCH
Confidence 00 0124566999999999999999999999998776654444
No 35
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.04 E-value=7.1e-11 Score=95.27 Aligned_cols=127 Identities=13% Similarity=0.215 Sum_probs=63.8
Q ss_pred EEEEe-CCeeEEeeehhhhccCHhHHhhcCCccccccceEEecCCCHHHHHHHhhhhccCCCCCCCCCCcC-C--CCC--
Q 019280 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVA-T--PSS-- 268 (343)
Q Consensus 195 v~~~v-~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~~~~-~--~~~-- 268 (343)
|+|.. +|+.|.||+.+ |..|++|++||.+.. ....|+|++|+..+++.+++|+|...-......... . ...
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~ 82 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDD 82 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSCHHHHHHHHHC------------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccch
Confidence 56664 79999999998 889999999997532 156899999999999999999998753211000000 0 000
Q ss_pred ---CCCC--cchHHHHHHHHHHHhhhChHhHHHHHHHHHhccC---ChhhHHHHHHHHhhcCch
Q 019280 269 ---SCMS--SVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDI---SVNSVAKILSLADEHHAT 324 (343)
Q Consensus 269 ---~~~~--~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~i---~~~~~~~~l~~a~~~~~~ 324 (343)
-++. ......+.+|+.||++++++.|.++|.+++...+ +++.+..++.++..+...
T Consensus 83 i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~e 146 (160)
T 2p1m_A 83 LKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPE 146 (160)
T ss_dssp ------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHH
T ss_pred hhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHH
Confidence 0000 1234459999999999999999999999998877 677777777776665543
No 36
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.68 E-value=2e-07 Score=69.66 Aligned_cols=94 Identities=17% Similarity=0.328 Sum_probs=76.3
Q ss_pred cEEEEeCCeeEEeeehhhhccC-HhHHhhcCCccc----cc-cceEEecCCCHHHHHHHhhhhccCCCCCCCCCCcCCCC
Q 019280 194 DITFDVAGEKFPAHKLVLAARS-PIFRSKFFDELE----ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATPS 267 (343)
Q Consensus 194 Dv~~~v~~~~~~~hk~iL~~~S-~~F~~~~~~~~~----e~-~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~~~~~~~ 267 (343)
-|.|.|||+.|...+..|+... .+|.+||.++.. .. ..++-| |-++..|+.+|+|+.+|.+..+..- +
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~---~-- 80 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDL---A-- 80 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTS---C--
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCC---C--
Confidence 4788999999999999999775 478999876421 11 455655 7899999999999999998765431 1
Q ss_pred CCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhc
Q 019280 268 SSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCK 304 (343)
Q Consensus 268 ~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 304 (343)
...+++-|+.|+++.|.+.|++.|.+
T Consensus 81 -----------~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 81 -----------EEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp -----------HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 67899999999999999999998864
No 37
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.44 E-value=9.4e-07 Score=71.54 Aligned_cols=130 Identities=14% Similarity=0.223 Sum_probs=87.1
Q ss_pred cEEEEe-CCeeEEeeehhhhccCHhHHhhcCCccc----cc-cceEEecCCCHHHHHHHhhhhccCCCCCCCCC-CcCCC
Q 019280 194 DITFDV-AGEKFPAHKLVLAARSPIFRSKFFDELE----ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDV-DVATP 266 (343)
Q Consensus 194 Dv~~~v-~~~~~~~hk~iL~~~S~~F~~~~~~~~~----e~-~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~-~~~~~ 266 (343)
-|+|+. +|+.|.+++.+ |.+|..++.|+..... +. ...|+|++|+..+++.+++|++...-...... .....
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 466664 78999999997 7789999999964322 12 47899999999999999999977543211100 00000
Q ss_pred CCCC-C------CcchHHHHHHHHHHHhhhChHhHHHHHHHHH---hccCChhhHHHHHHHHhhcCch
Q 019280 267 SSSC-M------SSVSDTLTAKLLAAADRYGLERLRLMCGSHL---CKDISVNSVAKILSLADEHHAT 324 (343)
Q Consensus 267 ~~~~-~------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l---~~~i~~~~~~~~l~~a~~~~~~ 324 (343)
.+.. + =.....++.+|+.||++++++.|.++|.+.+ ++.-+++-+..++.+...+...
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~e 154 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPE 154 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHH
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHH
Confidence 0000 0 0124567999999999999999999999987 4455666666666665555433
No 38
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.43 E-value=4.2e-07 Score=66.34 Aligned_cols=84 Identities=14% Similarity=0.202 Sum_probs=60.6
Q ss_pred EEEEe-CCeeEEeeehhhhccCHhHHhhcCC--ccccc-cceEEecCCCHHHHHHHhhhhccCC------CCCCCCCCcC
Q 019280 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFD--ELEED-KQEIIISDLEPKVFKAMLHFIYRDT------LTEDVDVDVA 264 (343)
Q Consensus 195 v~~~v-~~~~~~~hk~iL~~~S~~F~~~~~~--~~~e~-~~~i~l~~~~~~~~~~~L~~iY~~~------~~~~~~~~~~ 264 (343)
|++.. +|+.|.+++.+ |..|++++.|+.+ .+.|+ ...|+|++++..+++.+++|+|... -.+..-+ +
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~--v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP--I 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCC--C
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcc--c
Confidence 45665 89999999996 8899999999975 23565 6899999999999999999997633 1111001 2
Q ss_pred CCCCCCCCcchHHHHHHHHHHHhhhCh
Q 019280 265 TPSSSCMSSVSDTLTAKLLAAADRYGL 291 (343)
Q Consensus 265 ~~~~~~~~~~~~~~~~~ll~~A~~~~~ 291 (343)
..+ ++.+|+.||+++++
T Consensus 80 d~~----------~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APE----------IALELLMAANFLDC 96 (96)
T ss_dssp CTT----------THHHHHHHHHHHTC
T ss_pred CHH----------HHHHHHHHHHHhCc
Confidence 222 39999999999875
No 39
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.41 E-value=4.7e-07 Score=66.49 Aligned_cols=90 Identities=13% Similarity=0.260 Sum_probs=66.4
Q ss_pred cEEEEe-CCeeEEeeehhhhccCHhHHhhcCCccccc-cceEEecCCCHHHHHHHhhhhccCCCCCC---CCCCcCCCCC
Q 019280 194 DITFDV-AGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLHFIYRDTLTED---VDVDVATPSS 268 (343)
Q Consensus 194 Dv~~~v-~~~~~~~hk~iL~~~S~~F~~~~~~~~~e~-~~~i~l~~~~~~~~~~~L~~iY~~~~~~~---~~~~~~~~~~ 268 (343)
-|+|.. +|+.|.+++.+ |..|+.++.|+.+++ +. ...|+|++++..+++.+++|+|...-... .......+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w-- 80 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEF-- 80 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCC--
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCc--
Confidence 366666 89999999996 889999999998765 54 68999999999999999999986431000 00000000
Q ss_pred CCCCcchHHHHHHHHHHHhhhCh
Q 019280 269 SCMSSVSDTLTAKLLAAADRYGL 291 (343)
Q Consensus 269 ~~~~~~~~~~~~~ll~~A~~~~~ 291 (343)
.-...++.+|+.||+++++
T Consensus 81 ----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 81 ----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp ----CCCHHHHHHHHHHHHHHCC
T ss_pred ----cCCHHHHHHHHHHHHHhCc
Confidence 1335679999999999875
No 40
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.95 E-value=1.2e-05 Score=60.29 Aligned_cols=90 Identities=12% Similarity=0.190 Sum_probs=62.1
Q ss_pred cEEEE-eCCeeEEeeehhhhccCHhHHhhcCC--ccccc-cceEEecCCCHHHHHHHhhhhccCCCC-CCCCCCcCCCCC
Q 019280 194 DITFD-VAGEKFPAHKLVLAARSPIFRSKFFD--ELEED-KQEIIISDLEPKVFKAMLHFIYRDTLT-EDVDVDVATPSS 268 (343)
Q Consensus 194 Dv~~~-v~~~~~~~hk~iL~~~S~~F~~~~~~--~~~e~-~~~i~l~~~~~~~~~~~L~~iY~~~~~-~~~~~~~~~~~~ 268 (343)
-|+|+ .+|+.|.+++. +|..|+.++.|+.. .+.|. ...|+|++|+..+++.+++|++...-. ....+ ...+
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~-i~~w-- 93 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTE-IPEF-- 93 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSC-CCCC--
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCC-CCCc--
Confidence 46666 48999999999 57899999999974 33455 678999999999999999999753210 00000 0000
Q ss_pred CCCCcchHHHHHHHHHHHhhhCh
Q 019280 269 SCMSSVSDTLTAKLLAAADRYGL 291 (343)
Q Consensus 269 ~~~~~~~~~~~~~ll~~A~~~~~ 291 (343)
.....++.+|+.||+++++
T Consensus 94 ----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 ----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp ----CCCHHHHHHHHHHHHHHTC
T ss_pred ----ccCHHHHHHHHHHHHHhCc
Confidence 1345679999999999875
No 41
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.86 E-value=4.4e-05 Score=62.76 Aligned_cols=94 Identities=16% Similarity=0.309 Sum_probs=75.0
Q ss_pred cEEEEeCCeeEEeeehhhhccC-HhHHhhcCCcc--cc-c--cceEEecCCCHHHHHHHhhhhccCCCCCCCCCCcCCCC
Q 019280 194 DITFDVAGEKFPAHKLVLAARS-PIFRSKFFDEL--EE-D--KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATPS 267 (343)
Q Consensus 194 Dv~~~v~~~~~~~hk~iL~~~S-~~F~~~~~~~~--~e-~--~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~~~~~~~ 267 (343)
=|.|.|||..|...+..|+... .+|..||.+.. .. . ..++-| |-++..|+.+|+|+.+|.+..+..- .
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~---~-- 86 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDL---A-- 86 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTS---C--
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCC---C--
Confidence 4788899999999999998764 37888887542 11 1 455655 6799999999999999998765441 1
Q ss_pred CCCCCcchHHHHHHHHHHHhhhChHhHHHHHHHHHhc
Q 019280 268 SSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCK 304 (343)
Q Consensus 268 ~~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 304 (343)
...++.-|+.|+|+.|.+.|++.|.+
T Consensus 87 -----------~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 87 -----------EEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp -----------HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 56799999999999999999999865
No 42
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.18 E-value=0.00017 Score=53.29 Aligned_cols=40 Identities=25% Similarity=0.297 Sum_probs=36.7
Q ss_pred HhccCChhhHHHHHHHHhhcCchHHHHHHHHHHHhcccCC
Q 019280 302 LCKDISVNSVAKILSLADEHHATELKAVCLRFAAENLAGT 341 (343)
Q Consensus 302 l~~~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~~v 341 (343)
+.+.++++||+.++.+|+.|+++.|++.|.+||.+||.+|
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v 43 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQL 43 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHH
T ss_pred hhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999876
No 43
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=97.06 E-value=0.00049 Score=51.60 Aligned_cols=95 Identities=16% Similarity=0.222 Sum_probs=69.4
Q ss_pred cEEEEeCCeeEEeeehhhhccC-HhHHhhcCCcc-ccc-cceEEecCCCHHHHHHHhhhhccCCCCCCCCCCcCCCCCCC
Q 019280 194 DITFDVAGEKFPAHKLVLAARS-PIFRSKFFDEL-EED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATPSSSC 270 (343)
Q Consensus 194 Dv~~~v~~~~~~~hk~iL~~~S-~~F~~~~~~~~-~e~-~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~~~~~~~~~~ 270 (343)
=|+|.|||..|...+..|+... ..+..|+.+.. ... .+++-| |-++..|+.+|+|+.+|.+..+.. + .
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~---~---~-- 76 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTD---V---C-- 76 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSS---S---C--
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCc---c---c--
Confidence 4889999999999999998763 34566665421 112 566666 679999999999999999876543 1 1
Q ss_pred CCcchHHHHHHHHHHHhhhChHhHHH--HHHHHHhcc
Q 019280 271 MSSVSDTLTAKLLAAADRYGLERLRL--MCGSHLCKD 305 (343)
Q Consensus 271 ~~~~~~~~~~~ll~~A~~~~~~~l~~--~c~~~l~~~ 305 (343)
+..+++-|+.|+|+...- -|...+.+.
T Consensus 77 --------~~~~~~Ea~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 77 --------GPLFEEELEFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp --------HHHHHHHHHHHTCCGGGBCGGGSHHHHSC
T ss_pred --------HHHHHHHHHHhCCChHHHHHHHHHHHHhc
Confidence 788999999999977543 255555443
No 44
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=96.68 E-value=0.0046 Score=46.86 Aligned_cols=92 Identities=17% Similarity=0.249 Sum_probs=65.6
Q ss_pred CCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCccc----cc-cceEEecCCCHHHHHHHhhhhccCCCCCCCCCCcCCC
Q 019280 192 SSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELE----ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATP 266 (343)
Q Consensus 192 ~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~----e~-~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~~~~~~ 266 (343)
..-|.|.|||..|...+..|+... .+||....+ .. .+++-| |-++..|+.+|+|+-+|.+..+.. +
T Consensus 12 ~~~V~LNVGG~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~---~-- 82 (124)
T 1s1g_A 12 DELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY---E-- 82 (124)
T ss_dssp CCEEEEEETTEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT---S--
T ss_pred CCEEEEEeCCEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC---c--
Confidence 345889999999999999997543 233432111 11 456665 669999999999999999875543 1
Q ss_pred CCCCCCcchHHHHHHHHHHHhhhChHhHH--HHHHHHHh
Q 019280 267 SSSCMSSVSDTLTAKLLAAADRYGLERLR--LMCGSHLC 303 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~ll~~A~~~~~~~l~--~~c~~~l~ 303 (343)
. +..++.-|+.|+|..+. .-|.+.+.
T Consensus 83 -~----------~~~l~~Ea~fy~i~~l~l~~cC~~~~~ 110 (124)
T 1s1g_A 83 -C----------ISAYDDELAFYGILPEIIGDCCYEEYK 110 (124)
T ss_dssp -C----------HHHHHHHHHHTTCCGGGBCHHHHHHHH
T ss_pred -C----------HHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 1 78999999999998873 44555443
No 45
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=96.64 E-value=0.0025 Score=46.37 Aligned_cols=88 Identities=16% Similarity=0.195 Sum_probs=61.5
Q ss_pred EEEEeCCeeEEeeehhhhccCH-hHHhhcCCc-cccc-cceEEecCCCHHHHHHHhhhhcc-CCCCCCCCCCcCCCCCCC
Q 019280 195 ITFDVAGEKFPAHKLVLAARSP-IFRSKFFDE-LEED-KQEIIISDLEPKVFKAMLHFIYR-DTLTEDVDVDVATPSSSC 270 (343)
Q Consensus 195 v~~~v~~~~~~~hk~iL~~~S~-~F~~~~~~~-~~e~-~~~i~l~~~~~~~~~~~L~~iY~-~~~~~~~~~~~~~~~~~~ 270 (343)
|+|.|||..|...+..|+..-. .+.+|+... .... ..++-| |-++..|+.+|+|+.+ |.+..+.. + .
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~---~---~-- 73 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVN---V---P-- 73 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTT---S---C--
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCC---C---C--
Confidence 7889999999999999975421 233333210 1112 456666 6799999999999998 88765443 1 1
Q ss_pred CCcchHHHHHHHHHHHhhhChHhHH-HHHH
Q 019280 271 MSSVSDTLTAKLLAAADRYGLERLR-LMCG 299 (343)
Q Consensus 271 ~~~~~~~~~~~ll~~A~~~~~~~l~-~~c~ 299 (343)
+..++.-|+.|++..+. +.|.
T Consensus 74 --------~~~~~~Ea~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 74 --------LDVFSEEIKFYELGENAFERYR 95 (100)
T ss_dssp --------HHHHHHHHHHTTCCHHHHHHHH
T ss_pred --------HHHHHHHHHHcCCCHHHHHHHH
Confidence 78899999999997744 4443
No 46
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=96.25 E-value=0.011 Score=45.85 Aligned_cols=83 Identities=19% Similarity=0.294 Sum_probs=61.9
Q ss_pred CCcEEEEeCCeeEEeeehhhhccCHhHHhhcCCcccc----c-cceEEecCCCHHHHHHHhhhhccCCCCCCCCCCcCCC
Q 019280 192 SSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEE----D-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATP 266 (343)
Q Consensus 192 ~~Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~e----~-~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~~~~~~ 266 (343)
..-|+|.|||..|...+..|.... .+||....+. . ..++-| |-++..|+.+|+|+-+|.+..... +
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~---~-- 104 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY---E-- 104 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTT---S--
T ss_pred CCEEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCC---c--
Confidence 445889999999999999998643 2344331111 1 455665 669999999999999999876543 1
Q ss_pred CCCCCCcchHHHHHHHHHHHhhhChHhH
Q 019280 267 SSSCMSSVSDTLTAKLLAAADRYGLERL 294 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~ll~~A~~~~~~~l 294 (343)
. +..++.-|+.|+|+.+
T Consensus 105 -~----------~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 105 -C----------ISAYDDELAFYGILPE 121 (140)
T ss_dssp -C----------HHHHHHHHHHHTCCGG
T ss_pred -C----------HHHHHHHHHHcCCChH
Confidence 1 8889999999999886
No 47
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=96.00 E-value=0.0071 Score=44.42 Aligned_cols=88 Identities=17% Similarity=0.241 Sum_probs=62.7
Q ss_pred EEEEeCCeeEEeeehhhhccCHhHHhhcCCccc----cc-cceEEecCCCHHHHHHHhhhhccCCCCCCCCCCcCCCCCC
Q 019280 195 ITFDVAGEKFPAHKLVLAARSPIFRSKFFDELE----ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATPSSS 269 (343)
Q Consensus 195 v~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~~----e~-~~~i~l~~~~~~~~~~~L~~iY~~~~~~~~~~~~~~~~~~ 269 (343)
|.|.|||..|...+..|+.... +||....+ .. .+++-| |-++..|+.+|+|+-+|.+..+..- .
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~------~- 70 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHE------C- 70 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTS------C-
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCc------C-
Confidence 7899999999999999986532 33332111 11 455665 6699999999999999998755431 1
Q ss_pred CCCcchHHHHHHHHHHHhhhChHhHH--HHHHHHH
Q 019280 270 CMSSVSDTLTAKLLAAADRYGLERLR--LMCGSHL 302 (343)
Q Consensus 270 ~~~~~~~~~~~~ll~~A~~~~~~~l~--~~c~~~l 302 (343)
+..++.-|+.|+++.+. .-|.+.+
T Consensus 71 ---------~~~l~~Ea~fy~i~~l~~~~cc~~~~ 96 (105)
T 1nn7_A 71 ---------ISAYDEELAFFGLIPEIIGDCCYEEY 96 (105)
T ss_dssp ---------HHHHHHHHHHHTCCSCCBCHHHHHHH
T ss_pred ---------HHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 78899999999998863 3444433
No 48
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=91.66 E-value=0.17 Score=36.80 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=30.9
Q ss_pred cCChhhHHHHHHHHhhcCchHHHHHHHHHHHhcc
Q 019280 305 DISVNSVAKILSLADEHHATELKAVCLRFAAENL 338 (343)
Q Consensus 305 ~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~ 338 (343)
.++.+++..++.+|++|+++.|++.|.+|+.+++
T Consensus 76 ~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 3577899999999999999999999999998764
No 49
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.06 E-value=0.51 Score=34.25 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=40.2
Q ss_pred HHHHHHHHhhhChHhHHHHHHHHHhccC------------ChhhHHHHHHHHhhcCchHHHHHHHHHHHhc
Q 019280 279 TAKLLAAADRYGLERLRLMCGSHLCKDI------------SVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (343)
Q Consensus 279 ~~~ll~~A~~~~~~~l~~~c~~~l~~~i------------~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (343)
...++.+|+.|+++.|+..|.+|+.++. +.+.+..++.- +--+...+-+.+++++..+
T Consensus 13 Cl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~s-dv~~E~~vf~av~~Wv~~d 82 (105)
T 2eqx_A 13 CLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISD-GVPCSQNPTEAIEAWINFN 82 (105)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHT-CEETTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcC-CCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999998753 33333343332 2223344667777776544
No 50
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=88.24 E-value=0.76 Score=43.60 Aligned_cols=82 Identities=17% Similarity=0.226 Sum_probs=59.4
Q ss_pred cEEEEeCCeeEEeeehhhhccCHhHHhhcCCcc-----ccc-cceEEecCCCHHHHHHHhhhhcc-CCCCCCCCCCcCCC
Q 019280 194 DITFDVAGEKFPAHKLVLAARSPIFRSKFFDEL-----EED-KQEIIISDLEPKVFKAMLHFIYR-DTLTEDVDVDVATP 266 (343)
Q Consensus 194 Dv~~~v~~~~~~~hk~iL~~~S~~F~~~~~~~~-----~e~-~~~i~l~~~~~~~~~~~L~~iY~-~~~~~~~~~~~~~~ 266 (343)
-|.|.|||..|...+..|+..- .+++.... ... .+++-+ |-++..|+.+|+|+.+ |++..+.+ ++
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p---~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~---~~- 124 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFP---ETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVN---VP- 124 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTST---TSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTT---SC-
T ss_pred EEEEEeCCEEEEecHHHHhcCC---CCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCc---cc-
Confidence 4888899999999999997542 22332211 112 456666 7799999999999999 88865543 11
Q ss_pred CCCCCCcchHHHHHHHHHHHhhhChHhHH
Q 019280 267 SSSCMSSVSDTLTAKLLAAADRYGLERLR 295 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~ll~~A~~~~~~~l~ 295 (343)
...+++-|+.|++..+.
T Consensus 125 ------------~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 125 ------------LDIFSEEIRFYELGEEA 141 (514)
T ss_dssp ------------HHHHHHHHHHTTCCHHH
T ss_pred ------------HHHHHHHHHhcCCCHHH
Confidence 67889999999997654
No 51
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=87.61 E-value=0.3 Score=37.36 Aligned_cols=36 Identities=11% Similarity=0.238 Sum_probs=32.5
Q ss_pred cCChhhHHHHHHHHhhcCchHHHHHHHHHHHhcccC
Q 019280 305 DISVNSVAKILSLADEHHATELKAVCLRFAAENLAG 340 (343)
Q Consensus 305 ~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~~ 340 (343)
.++.+|+..++..|++|+++.|++.|.+|+.+++..
T Consensus 100 ~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~ 135 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLD 135 (138)
T ss_dssp CCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSC
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccc
Confidence 367889999999999999999999999999988753
No 52
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=85.75 E-value=0.77 Score=34.33 Aligned_cols=32 Identities=9% Similarity=0.250 Sum_probs=29.5
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHHHhc
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (343)
++.+++..++..|++|+.+.|++.|.+|+.++
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 57789999999999999999999999999864
No 53
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=84.71 E-value=0.39 Score=36.58 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=29.1
Q ss_pred cCChhhHHHHHHHHhhcCchHHHHHHHHHHHhcccC
Q 019280 305 DISVNSVAKILSLADEHHATELKAVCLRFAAENLAG 340 (343)
Q Consensus 305 ~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~~ 340 (343)
.++.+|+..++..|++|+++.|++.|.+|+.+++..
T Consensus 86 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 367889999999999999999999999999887653
No 54
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=82.56 E-value=1.4 Score=32.49 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=29.4
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHHHhc
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (343)
++.+++..++..|++|+.+.|++.|.+|+.+.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 57789999999999999999999999999764
No 55
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=82.56 E-value=1.1 Score=33.04 Aligned_cols=31 Identities=16% Similarity=0.345 Sum_probs=28.4
Q ss_pred cCChhhHHHHHHHHhhcCchHHHHHHHHHHH
Q 019280 305 DISVNSVAKILSLADEHHATELKAVCLRFAA 335 (343)
Q Consensus 305 ~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~ 335 (343)
.++.+|+..++..|++++.+.|++.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 3677899999999999999999999999985
No 56
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=82.28 E-value=1.1 Score=32.89 Aligned_cols=30 Identities=20% Similarity=0.153 Sum_probs=27.9
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHHH
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFAA 335 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~ 335 (343)
++.+++..++..|++|+.+.|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 577899999999999999999999999985
No 57
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=81.32 E-value=0.75 Score=34.01 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=27.4
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHHHhc
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (343)
++.+|+..++..|++|+.+.|++.|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 57789999999999999999999999998764
No 58
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=80.13 E-value=1.9 Score=31.64 Aligned_cols=29 Identities=28% Similarity=0.366 Sum_probs=27.2
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHH
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFA 334 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i 334 (343)
++.+++..++..|++|+.+.|++.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 57789999999999999999999999987
No 59
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=76.50 E-value=2.5 Score=33.17 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=30.5
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHHHhccc
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (343)
++.+++..++.+|++|+++.|++.|.+++.+++.
T Consensus 100 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~ 133 (172)
T 3htm_A 100 NLDKMADDLLAAADKYALERLKVMCEDALCSNLS 133 (172)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCC
T ss_pred CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCC
Confidence 4678899999999999999999999999997654
No 60
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=71.86 E-value=1.7 Score=33.29 Aligned_cols=30 Identities=23% Similarity=0.476 Sum_probs=27.2
Q ss_pred cCChhhHHHHHHHHhhcCchHHHHHHHHHH
Q 019280 305 DISVNSVAKILSLADEHHATELKAVCLRFA 334 (343)
Q Consensus 305 ~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i 334 (343)
.++.+++..++..|++|+.+.|++.|.+|+
T Consensus 114 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 357789999999999999999999999876
No 61
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=71.83 E-value=1.7 Score=32.98 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=26.1
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHHHhccc
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (343)
++.+++..++..|++|+.+.|++.|.+++.+++.
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~ 124 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNLS 124 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC------
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence 4678899999999999999999999999987653
No 62
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=69.46 E-value=3.2 Score=30.61 Aligned_cols=32 Identities=13% Similarity=0.267 Sum_probs=27.7
Q ss_pred cCChhhHHHHHHHHhhcCchHHHHHHHHHHHh
Q 019280 305 DISVNSVAKILSLADEHHATELKAVCLRFAAE 336 (343)
Q Consensus 305 ~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~ 336 (343)
.++.+|+..++..|+.++.+.|++.|.+++..
T Consensus 86 ~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 35789999999999999999999999998753
No 63
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=67.61 E-value=0.96 Score=33.94 Aligned_cols=33 Identities=12% Similarity=0.070 Sum_probs=23.4
Q ss_pred cCChhhHHHHHHHHhhcCchHHHHHHHHHHHhc
Q 019280 305 DISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (343)
Q Consensus 305 ~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (343)
.++.+|+..++..|+.++.+.|++.|.+|+.+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 467889999999999999999999999999865
No 64
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=64.78 E-value=6 Score=34.44 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=26.4
Q ss_pred HHHHHHHHhhhChHhHHHHHHHHHhccC
Q 019280 279 TAKLLAAADRYGLERLRLMCGSHLCKDI 306 (343)
Q Consensus 279 ~~~ll~~A~~~~~~~l~~~c~~~l~~~i 306 (343)
+..+|.+|++|+++.|+..|.++|..++
T Consensus 277 ~~~~l~~A~~~~~~~L~~~~~~~i~~~~ 304 (312)
T 3hqi_A 277 AAEILILADLHSADQLKTQAVDFINYHA 304 (312)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998764
No 65
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=64.35 E-value=7.2 Score=19.29 Aligned_cols=21 Identities=33% Similarity=0.555 Sum_probs=17.9
Q ss_pred HHHHHHhhcCchHHHHHHHHH
Q 019280 313 KILSLADEHHATELKAVCLRF 333 (343)
Q Consensus 313 ~~l~~a~~~~~~~L~~~~~~~ 333 (343)
.++-+|.+|+.++|..+|++-
T Consensus 3 kvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhc
Confidence 567789999999999999874
No 66
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=63.87 E-value=5.5 Score=33.58 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=30.7
Q ss_pred cCChhhHHHHHHHHhhcCchHHHHHHHHHHHhccc
Q 019280 305 DISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (343)
Q Consensus 305 ~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (343)
.++.+++..++..|..|+.+.|++.|.+|+.+++.
T Consensus 98 ~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~ 132 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIA 132 (256)
T ss_dssp CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCC
T ss_pred cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCC
Confidence 36788999999999999999999999999997754
No 67
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=59.15 E-value=5.8 Score=33.94 Aligned_cols=34 Identities=35% Similarity=0.515 Sum_probs=30.8
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHHHhccc
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (343)
++.+++..++..|.+++.+.|++.|.+|+.+++.
T Consensus 107 i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~ 140 (279)
T 3i3n_A 107 VSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLH 140 (279)
T ss_dssp EETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCC
Confidence 5678999999999999999999999999997654
No 68
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=55.22 E-value=19 Score=27.91 Aligned_cols=42 Identities=12% Similarity=0.115 Sum_probs=35.0
Q ss_pred HHHHHHHhccCChhhHHHHHHHHhhcCchHHHHHHHHHHHhccc
Q 019280 296 LMCGSHLCKDISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (343)
Q Consensus 296 ~~c~~~l~~~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (343)
....+|+ .++.+++..++..|...+...|.+.|.++++..+.
T Consensus 86 ~wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 86 VWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp HHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 3444455 37899999999999999999999999999986654
No 69
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=53.65 E-value=2.6 Score=31.47 Aligned_cols=28 Identities=21% Similarity=0.193 Sum_probs=20.4
Q ss_pred eceEEEEEEcCccccccCCCCCeEeecccc
Q 019280 22 VNGSHKFVIQGYSLAKGMGIGKHIASDNFT 51 (343)
Q Consensus 22 ~~~~~~w~I~~fs~~~~~~~~~~~~S~~f~ 51 (343)
.+|.++|+|.+|+..| ..|..+.|=.|.
T Consensus 10 ~~gd~vwkIs~F~~RK--peGty~nsvsFn 37 (133)
T 3v0r_A 10 TEGDYVWKISEFYGRK--PEGTYYNSLGFN 37 (133)
T ss_dssp CCCTTEEEEEEEEEEE--TTSSSCSEEEEE
T ss_pred cCCceEEEeeeeeeEc--CCCCceeeEEEE
Confidence 3489999999999888 356666665553
No 70
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=48.92 E-value=1.1 Score=33.31 Aligned_cols=30 Identities=13% Similarity=0.340 Sum_probs=26.5
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHHH
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFAA 335 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~ 335 (343)
++.+|+..++..|++|+++.|++.|.+|+.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 567899999999999999999999988763
No 71
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=43.57 E-value=47 Score=25.03 Aligned_cols=42 Identities=12% Similarity=0.115 Sum_probs=34.5
Q ss_pred HHHHHHHhccCChhhHHHHHHHHhhcCchHHHHHHHHHHHhccc
Q 019280 296 LMCGSHLCKDISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (343)
Q Consensus 296 ~~c~~~l~~~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (343)
..-.+|+ .++.+++.+++..|...+...|.+.|.++++..+.
T Consensus 81 ~wD~~F~--~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 81 VWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp HHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH--hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc
Confidence 3334445 37899999999999999999999999999986543
No 72
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=41.54 E-value=18 Score=19.02 Aligned_cols=23 Identities=30% Similarity=0.521 Sum_probs=17.1
Q ss_pred HHHHHHHhhcCchHHHHHHHHHH
Q 019280 312 AKILSLADEHHATELKAVCLRFA 334 (343)
Q Consensus 312 ~~~l~~a~~~~~~~L~~~~~~~i 334 (343)
..++-+|.+|+.++|..+|+.-.
T Consensus 7 ckvmcyaqrhsspellrrcldnc 29 (34)
T 2cmy_B 7 CKVMCYAQRHSSPELLRRCLDNC 29 (34)
T ss_dssp CHHHHHHBC--CCHHHHHHHHHC
T ss_pred hhHHHHHhhcCCHHHHHHHHHhh
Confidence 36778899999999999998753
No 73
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=38.36 E-value=1.5 Score=32.64 Aligned_cols=29 Identities=17% Similarity=0.377 Sum_probs=25.3
Q ss_pred cCChhhHHHHHHHHhhcCchHHHHHHHHH
Q 019280 305 DISVNSVAKILSLADEHHATELKAVCLRF 333 (343)
Q Consensus 305 ~i~~~~~~~~l~~a~~~~~~~L~~~~~~~ 333 (343)
.++.+++..++..|+.++.+.|++.|.+|
T Consensus 96 ~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 96 LLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp EECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred EECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 35788999999999999999999888765
No 74
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=26.84 E-value=1e+02 Score=20.29 Aligned_cols=46 Identities=11% Similarity=0.104 Sum_probs=30.6
Q ss_pred HHHHHHHHHhccCChhhHHHHHHHHhhcCchHHHHHHHHHHHhcccC
Q 019280 294 LRLMCGSHLCKDISVNSVAKILSLADEHHATELKAVCLRFAAENLAG 340 (343)
Q Consensus 294 l~~~c~~~l~~~i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~~ 340 (343)
+....+++| ++-+.+++...+.-.-.+=-..++..|-.++.++...
T Consensus 10 ~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~~~~~~C~~~V~~y~~~ 55 (74)
T 1l9l_A 10 IVQKLKKMV-DKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSR 55 (74)
T ss_dssp HHHHHHHHC-SSCCHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cccCHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 445566666 6667777777776666654455888888888766543
No 75
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=25.32 E-value=49 Score=25.57 Aligned_cols=34 Identities=12% Similarity=0.146 Sum_probs=23.8
Q ss_pred CChhhHHHHHHHHhhcCchHHHHHHHHHHHhccc
Q 019280 306 ISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (343)
Q Consensus 306 i~~~~~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (343)
++.+++..++..|...+...|.+.|.++++..+.
T Consensus 93 vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 93 IDQATLFELILAANYLNIKNLLDLTCQTVADMIK 126 (160)
T ss_dssp --------CHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 6888999999999999999999999999987653
Done!