BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019282
MALVTSPTQQKGIVITVPVLVLTLSVAAIFFFFLLSSLSTCNCPLSSTTTDAANAVRNGA
VSDFARSEDDSSSSSRRFSERTSATKEDIEWVRDQIHKNGLHMQDNVLRKGINPRTRAQQ
LQDLIQFKGISHYEGLEANNHTALPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEASHIT
PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVR
GEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCS
RLGGEECTKRLTSLGLEYIGKKTHDSLLFNHYEIWFEFRRSGA

High Scoring Gene Products

Symbol, full name Information P value
AT3G05100 protein from Arabidopsis thaliana 1.5e-120
CPS_2928
Putative uncharacterized protein
protein from Colwellia psychrerythraea 34H 8.3e-08
CPS_2928
conserved hypothetical protein
protein from Colwellia psychrerythraea 34H 8.3e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019282
        (343 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2096274 - symbol:AT3G05100 "AT3G05100" species...  1186  1.5e-120  1
UNIPROTKB|Q47ZZ1 - symbol:CPS_2928 "Putative uncharacteri...   141  8.3e-08   1
TIGR_CMR|CPS_2928 - symbol:CPS_2928 "conserved hypothetic...   141  8.3e-08   1


>TAIR|locus:2096274 [details] [associations]
            symbol:AT3G05100 "AT3G05100" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008168
            EMBL:AC009177 EMBL:AY070370 EMBL:AY091328 IPI:IPI00526243
            RefSeq:NP_187161.1 UniGene:At.28030 UniGene:At.67874
            ProteinModelPortal:Q9MAA9 SMR:Q9MAA9 IntAct:Q9MAA9 PaxDb:Q9MAA9
            PRIDE:Q9MAA9 EnsemblPlants:AT3G05100.1 GeneID:819672
            KEGG:ath:AT3G05100 TAIR:At3g05100 eggNOG:NOG78553
            HOGENOM:HOG000030289 InParanoid:Q9MAA9 OMA:WTGLERL PhylomeDB:Q9MAA9
            ProtClustDB:CLSN2684458 ArrayExpress:Q9MAA9 Genevestigator:Q9MAA9
            Uniprot:Q9MAA9
        Length = 336

 Score = 1186 (422.6 bits), Expect = 1.5e-120, P = 1.5e-120
 Identities = 226/338 (66%), Positives = 256/338 (75%)

Query:     5 TSPTQQKGXXXXXXXXXXXXXXAAIXXXXXXXXXXTCNCP--LSSTTTDAANAVRNGAVX 62
             +SP  QKG               A           +C+CP  LSS+ TDA  A   G+  
Sbjct:     8 SSPAMQKGIFVSMPVLVLTVSFVAAVFFLLSSSFSSCSCPEALSSSPTDAVEASVGGS-- 65

Query:    63 XXXXXXXXXXXXXXXXXXXXXXXKEDIEWVRDQIHKNGLHMQDNVLRKGINPRTRAQQLQ 122
                                    ++DIEWVRD I  NGLHMQ N LRKGINPRTR QQL 
Sbjct:    66 ----------GGDVRFEDRISPTQDDIEWVRDLIRSNGLHMQKNELRKGINPRTRDQQLA 115

Query:   123 DLIQFKGISHYEGLEANNHTALPCPGELLVEEHHSNYGEPWAGGRDVFEFLAEASHITPN 182
             DLIQ+KGISHYEG EANNHTALPCPGELLVE+HHSNYGEPWAGGRDVFEFLAE+S + PN
Sbjct:   116 DLIQYKGISHYEGDEANNHTALPCPGELLVEQHHSNYGEPWAGGRDVFEFLAESSSLKPN 175

Query:   183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGE 242
             S VLEIGCGTLRVG+HFIRYL+P++FHCLE+DELSLMAA RYELPSQGLLHKRP+IVRG+
Sbjct:   176 SRVLEIGCGTLRVGLHFIRYLSPQHFHCLEKDELSLMAALRYELPSQGLLHKRPLIVRGD 235

Query:   243 DMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRL 302
             DM+F+KFGS   YDLIYASAVFLHMPDKLVW GLERL  +L+PYDGRIFVSHN+KFCSRL
Sbjct:   236 DMEFSKFGSDTAYDLIYASAVFLHMPDKLVWTGLERLVDRLKPYDGRIFVSHNVKFCSRL 295

Query:   303 GGEECTKRLTSLGLEYIGKKTHDSLLFNHYEIWFEFRR 340
             G ++C+++L SLGLEY+GK+THDSLLFNHYEIWF FRR
Sbjct:   296 GQDKCSQKLASLGLEYLGKQTHDSLLFNHYEIWFGFRR 333


>UNIPROTKB|Q47ZZ1 [details] [associations]
            symbol:CPS_2928 "Putative uncharacterized protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000083 RefSeq:YP_269628.1 ProteinModelPortal:Q47ZZ1
            GeneID:3518870 GenomeReviews:CP000083_GR KEGG:cps:CPS_2928
            PATRIC:21468883 eggNOG:NOG78553 BioCyc:CPSY167879:GI48-2977-MONOMER
            GO:GO:0008168 GO:GO:0032259 InterPro:IPR013216 Pfam:PF08241
            Uniprot:Q47ZZ1
        Length = 224

 Score = 141 (54.7 bits), Expect = 8.3e-08, P = 8.3e-08
 Identities = 37/139 (26%), Positives = 74/139 (53%)

Query:   160 GEPWAG-GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSL 218
             G  W   G+  FE+L +   +  +  +L+IGCGTLR G HFI+YLN  N++ ++    ++
Sbjct:    38 GGMWEEIGKLQFEYLTKKG-LQCHHELLDIGCGTLRGGRHFIKYLNSSNYYGVDISFKAI 96

Query:   219 MAAFRYELPSQGLLHKRP--IIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGL 276
              +A +  +  + L  K+P  ++ + + ++F  +  G  +D I+A +VF H+  + +    
Sbjct:    97 ESA-KELVVEEKLSDKKPQLLLDKNKSLNFNCY-LGKTFDFIFAQSVFTHLKPEHISECF 154

Query:   277 ERLASKLRPYDGRIFVSHN 295
             E +   +   D   + ++N
Sbjct:   155 ENIGQIMNE-DSAFYFTYN 172


>TIGR_CMR|CPS_2928 [details] [associations]
            symbol:CPS_2928 "conserved hypothetical protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000083 RefSeq:YP_269628.1 ProteinModelPortal:Q47ZZ1
            GeneID:3518870 GenomeReviews:CP000083_GR KEGG:cps:CPS_2928
            PATRIC:21468883 eggNOG:NOG78553 BioCyc:CPSY167879:GI48-2977-MONOMER
            GO:GO:0008168 GO:GO:0032259 InterPro:IPR013216 Pfam:PF08241
            Uniprot:Q47ZZ1
        Length = 224

 Score = 141 (54.7 bits), Expect = 8.3e-08, P = 8.3e-08
 Identities = 37/139 (26%), Positives = 74/139 (53%)

Query:   160 GEPWAG-GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSL 218
             G  W   G+  FE+L +   +  +  +L+IGCGTLR G HFI+YLN  N++ ++    ++
Sbjct:    38 GGMWEEIGKLQFEYLTKKG-LQCHHELLDIGCGTLRGGRHFIKYLNSSNYYGVDISFKAI 96

Query:   219 MAAFRYELPSQGLLHKRP--IIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGL 276
              +A +  +  + L  K+P  ++ + + ++F  +  G  +D I+A +VF H+  + +    
Sbjct:    97 ESA-KELVVEEKLSDKKPQLLLDKNKSLNFNCY-LGKTFDFIFAQSVFTHLKPEHISECF 154

Query:   277 ERLASKLRPYDGRIFVSHN 295
             E +   +   D   + ++N
Sbjct:   155 ENIGQIMNE-DSAFYFTYN 172


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      343       295   0.00092  115 3  11 22  0.36    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  232 KB (2127 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.91u 0.11s 21.02t   Elapsed:  00:00:01
  Total cpu time:  20.91u 0.11s 21.02t   Elapsed:  00:00:01
  Start:  Sat May 11 07:24:10 2013   End:  Sat May 11 07:24:11 2013

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