Query 019282
Match_columns 343
No_of_seqs 307 out of 2522
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 13:40:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019282.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019282hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.8 8.1E-19 2.8E-23 162.2 12.8 140 178-322 67-243 (261)
2 3ujc_A Phosphoethanolamine N-m 99.7 4.2E-17 1.4E-21 148.6 17.3 164 164-336 38-218 (266)
3 3bus_A REBM, methyltransferase 99.7 5.2E-17 1.8E-21 149.2 17.4 164 165-337 45-229 (273)
4 1nkv_A Hypothetical protein YJ 99.7 4.1E-17 1.4E-21 148.3 15.8 157 165-331 20-194 (256)
5 1kpg_A CFA synthase;, cyclopro 99.7 7.2E-17 2.5E-21 149.6 16.9 151 166-325 49-229 (287)
6 3hem_A Cyclopropane-fatty-acyl 99.7 1.9E-16 6.5E-21 148.2 19.2 162 166-337 57-256 (302)
7 1vl5_A Unknown conserved prote 99.7 6.3E-17 2.1E-21 147.9 13.5 156 170-338 26-202 (260)
8 2fk8_A Methoxy mycolic acid sy 99.7 3.4E-16 1.2E-20 147.5 17.5 149 166-324 75-254 (318)
9 2p7i_A Hypothetical protein; p 99.7 1.5E-16 5E-21 143.1 14.1 132 179-325 40-200 (250)
10 3dtn_A Putative methyltransfer 99.7 7.1E-16 2.4E-20 138.4 18.5 146 169-323 31-213 (234)
11 3e23_A Uncharacterized protein 99.7 9.9E-17 3.4E-21 141.9 11.6 149 178-341 40-200 (211)
12 2o57_A Putative sarcosine dime 99.7 2.6E-16 8.8E-21 146.6 14.4 151 166-325 63-235 (297)
13 3dli_A Methyltransferase; PSI- 99.7 1.8E-16 6.3E-21 143.2 12.8 134 179-327 39-187 (240)
14 1pjz_A Thiopurine S-methyltran 99.7 2E-16 6.7E-21 140.3 12.4 149 169-326 11-178 (203)
15 3dlc_A Putative S-adenosyl-L-m 99.7 2.3E-16 8E-21 139.1 12.5 148 166-323 29-202 (219)
16 3vc1_A Geranyl diphosphate 2-C 99.7 4.5E-16 1.5E-20 146.6 15.0 161 166-336 101-281 (312)
17 3f4k_A Putative methyltransfer 99.7 9.1E-16 3.1E-20 139.5 16.3 153 167-329 31-201 (257)
18 1xtp_A LMAJ004091AAA; SGPP, st 99.7 3.5E-16 1.2E-20 141.8 13.1 155 169-332 81-246 (254)
19 4htf_A S-adenosylmethionine-de 99.7 6.6E-16 2.2E-20 143.1 15.0 144 172-324 60-232 (285)
20 3hnr_A Probable methyltransfer 99.7 1E-15 3.6E-20 135.9 15.4 134 178-324 42-201 (220)
21 2p35_A Trans-aconitate 2-methy 99.7 2.3E-15 7.8E-20 136.8 18.0 141 168-322 20-188 (259)
22 3lcc_A Putative methyl chlorid 99.7 6.3E-16 2.2E-20 139.1 13.4 141 176-325 62-208 (235)
23 3kkz_A Uncharacterized protein 99.7 1.1E-15 3.6E-20 140.4 15.0 152 168-329 32-201 (267)
24 3jwg_A HEN1, methyltransferase 99.7 1.5E-15 5E-20 135.2 15.0 153 165-322 13-190 (219)
25 3dh0_A SAM dependent methyltra 99.7 2.3E-15 8E-20 133.5 16.3 144 172-324 28-181 (219)
26 3jwh_A HEN1; methyltransferase 99.7 9.6E-16 3.3E-20 136.3 13.6 150 167-322 15-190 (217)
27 1xxl_A YCGJ protein; structura 99.7 1.4E-15 4.8E-20 137.6 14.8 156 170-338 10-186 (239)
28 3g5l_A Putative S-adenosylmeth 99.7 1.7E-15 5.7E-20 137.7 15.3 143 170-324 33-216 (253)
29 3h2b_A SAM-dependent methyltra 99.6 1.5E-15 5.2E-20 133.3 14.2 132 182-326 42-184 (203)
30 3ou2_A SAM-dependent methyltra 99.6 1.7E-15 5.9E-20 133.8 14.1 134 178-324 43-205 (218)
31 3l8d_A Methyltransferase; stru 99.6 3.5E-15 1.2E-19 134.2 15.4 141 168-323 42-199 (242)
32 3gu3_A Methyltransferase; alph 99.6 3.8E-15 1.3E-19 138.3 14.1 147 168-324 8-190 (284)
33 2gb4_A Thiopurine S-methyltran 99.6 6.3E-15 2.2E-19 135.4 15.1 153 168-327 55-230 (252)
34 3ccf_A Cyclopropane-fatty-acyl 99.6 5.7E-15 1.9E-19 136.5 14.7 134 175-324 51-210 (279)
35 2yqz_A Hypothetical protein TT 99.6 4.7E-15 1.6E-19 134.9 13.9 145 168-323 25-195 (263)
36 2ex4_A Adrenal gland protein A 99.6 3.9E-15 1.3E-19 134.5 13.0 144 180-330 78-231 (241)
37 3sm3_A SAM-dependent methyltra 99.6 5.5E-15 1.9E-19 131.9 13.8 139 179-324 28-207 (235)
38 3mgg_A Methyltransferase; NYSG 99.6 6.5E-15 2.2E-19 135.5 14.2 149 167-324 23-198 (276)
39 2aot_A HMT, histamine N-methyl 99.6 2.9E-15 9.8E-20 139.7 11.9 140 180-323 51-220 (292)
40 3bkw_A MLL3908 protein, S-aden 99.6 1.8E-14 6.2E-19 129.5 16.2 141 172-324 34-214 (243)
41 3bkx_A SAM-dependent methyltra 99.6 1.7E-14 5.7E-19 132.6 15.6 156 166-324 28-219 (275)
42 4e2x_A TCAB9; kijanose, tetron 99.6 9.3E-16 3.2E-20 150.0 7.6 148 165-324 91-253 (416)
43 3g2m_A PCZA361.24; SAM-depende 99.6 3.3E-15 1.1E-19 139.6 11.0 148 169-325 71-275 (299)
44 1y8c_A S-adenosylmethionine-de 99.6 9.8E-15 3.4E-19 131.1 13.7 133 180-323 36-224 (246)
45 3pfg_A N-methyltransferase; N, 99.6 1.1E-14 3.9E-19 133.1 14.0 111 167-293 38-150 (263)
46 3cc8_A Putative methyltransfer 99.6 3.2E-14 1.1E-18 126.3 16.4 141 180-336 31-196 (230)
47 3i9f_A Putative type 11 methyl 99.6 5.6E-15 1.9E-19 126.0 11.0 129 177-325 13-149 (170)
48 3ege_A Putative methyltransfer 99.6 2.9E-14 9.8E-19 130.7 15.3 140 167-324 20-178 (261)
49 3ocj_A Putative exported prote 99.6 1.4E-14 4.6E-19 136.0 12.8 141 177-323 114-290 (305)
50 2xvm_A Tellurite resistance pr 99.6 1.8E-14 6.2E-19 125.4 12.6 137 175-323 26-172 (199)
51 1ri5_A MRNA capping enzyme; me 99.6 2E-14 6.7E-19 133.2 13.1 143 178-325 61-251 (298)
52 3i53_A O-methyltransferase; CO 99.6 3.6E-14 1.2E-18 134.6 15.3 142 175-325 163-322 (332)
53 2r3s_A Uncharacterized protein 99.6 5E-14 1.7E-18 133.2 16.0 148 168-323 150-322 (335)
54 4fsd_A Arsenic methyltransfera 99.6 2.7E-14 9.2E-19 138.6 14.3 141 179-325 81-252 (383)
55 3e8s_A Putative SAM dependent 99.6 2.5E-14 8.4E-19 126.8 12.7 131 178-323 49-208 (227)
56 3g07_A 7SK snRNA methylphospha 99.6 8.6E-15 2.9E-19 136.9 9.8 140 180-323 45-268 (292)
57 3gwz_A MMCR; methyltransferase 99.6 1.3E-13 4.4E-18 133.1 18.3 146 169-323 190-355 (369)
58 3mcz_A O-methyltransferase; ad 99.6 3.1E-14 1.1E-18 135.9 13.7 144 172-321 169-336 (352)
59 3cgg_A SAM-dependent methyltra 99.5 7.1E-14 2.4E-18 120.7 13.6 130 179-323 44-174 (195)
60 4df3_A Fibrillarin-like rRNA/T 99.5 7.8E-14 2.7E-18 126.6 14.4 147 177-333 73-226 (233)
61 3ofk_A Nodulation protein S; N 99.5 3.8E-14 1.3E-18 125.5 11.8 135 168-313 38-178 (216)
62 3lst_A CALO1 methyltransferase 99.5 1.1E-13 3.9E-18 132.2 16.0 143 170-323 173-335 (348)
63 1x19_A CRTF-related protein; m 99.5 3E-13 1E-17 129.7 17.9 148 168-324 177-348 (359)
64 1qzz_A RDMB, aclacinomycin-10- 99.5 1.9E-13 6.3E-18 131.5 16.3 146 171-325 172-340 (374)
65 3d2l_A SAM-dependent methyltra 99.5 1.5E-13 5.1E-18 123.4 14.4 113 168-293 22-136 (243)
66 2i62_A Nicotinamide N-methyltr 99.5 6.1E-14 2.1E-18 127.6 11.9 143 178-325 53-240 (265)
67 3thr_A Glycine N-methyltransfe 99.5 7.3E-14 2.5E-18 129.5 12.6 122 167-293 43-174 (293)
68 3bxo_A N,N-dimethyltransferase 99.5 2.8E-13 9.6E-18 121.3 16.0 110 168-293 29-140 (239)
69 3dp7_A SAM-dependent methyltra 99.5 1.4E-13 4.8E-18 132.5 14.7 137 180-323 178-341 (363)
70 3m70_A Tellurite resistance pr 99.5 6.9E-14 2.4E-18 129.5 11.7 130 180-322 119-258 (286)
71 4hg2_A Methyltransferase type 99.5 5.2E-14 1.8E-18 129.6 10.7 107 168-293 28-134 (257)
72 1fbn_A MJ fibrillarin homologu 99.5 1.5E-13 5E-18 123.7 13.2 153 167-332 57-221 (230)
73 2ip2_A Probable phenazine-spec 99.5 2.2E-13 7.4E-18 129.1 15.0 146 168-323 155-321 (334)
74 3hm2_A Precorrin-6Y C5,15-meth 99.5 1.9E-13 6.6E-18 116.9 13.2 143 167-326 11-155 (178)
75 2a14_A Indolethylamine N-methy 99.5 7.2E-14 2.5E-18 128.5 10.9 143 178-324 52-238 (263)
76 1wzn_A SAM-dependent methyltra 99.5 3.9E-13 1.3E-17 121.7 15.6 113 170-293 30-144 (252)
77 1tw3_A COMT, carminomycin 4-O- 99.5 4E-13 1.4E-17 128.6 16.4 145 171-324 173-339 (360)
78 1vlm_A SAM-dependent methyltra 99.5 1.6E-13 5.6E-18 122.1 12.6 122 182-324 48-188 (219)
79 2g72_A Phenylethanolamine N-me 99.5 1.6E-13 5.5E-18 127.4 12.1 142 180-325 70-257 (289)
80 3iv6_A Putative Zn-dependent a 99.5 1.1E-13 3.8E-18 127.7 10.7 114 169-295 33-149 (261)
81 3mq2_A 16S rRNA methyltransfer 99.5 1.4E-13 4.8E-18 122.3 10.5 143 178-327 24-187 (218)
82 3evz_A Methyltransferase; NYSG 99.5 7E-13 2.4E-17 118.6 15.1 138 177-325 51-207 (230)
83 3mti_A RRNA methylase; SAM-dep 99.5 1.9E-13 6.5E-18 118.2 11.0 140 177-324 18-169 (185)
84 4a6d_A Hydroxyindole O-methylt 99.5 1.6E-12 5.4E-17 124.8 18.5 145 170-323 168-333 (353)
85 3orh_A Guanidinoacetate N-meth 99.5 2.5E-14 8.6E-19 129.7 5.2 136 179-322 58-208 (236)
86 3reo_A (ISO)eugenol O-methyltr 99.5 1.1E-12 3.8E-17 126.6 17.1 139 170-324 191-355 (368)
87 3njr_A Precorrin-6Y methylase; 99.5 5.1E-13 1.7E-17 118.4 13.5 145 166-329 40-185 (204)
88 2kw5_A SLR1183 protein; struct 99.5 4.8E-13 1.6E-17 117.1 12.7 131 179-324 28-171 (202)
89 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.6E-12 5.4E-17 115.4 15.6 149 180-337 40-201 (214)
90 3g5t_A Trans-aconitate 3-methy 99.4 1E-12 3.4E-17 122.6 14.9 118 167-292 23-147 (299)
91 3p9c_A Caffeic acid O-methyltr 99.4 2E-12 6.7E-17 124.7 17.3 140 169-324 188-353 (364)
92 2p8j_A S-adenosylmethionine-de 99.4 2.3E-13 7.9E-18 119.5 9.8 137 178-322 20-181 (209)
93 1zx0_A Guanidinoacetate N-meth 99.4 1.7E-13 5.9E-18 123.5 8.9 143 168-318 48-204 (236)
94 3e05_A Precorrin-6Y C5,15-meth 99.4 3.3E-12 1.1E-16 112.3 16.7 136 166-317 25-161 (204)
95 3ggd_A SAM-dependent methyltra 99.4 1.1E-12 3.9E-17 118.3 13.8 135 178-323 53-218 (245)
96 1ve3_A Hypothetical protein PH 99.4 1.8E-12 6.1E-17 115.1 14.6 116 167-293 26-141 (227)
97 1nt2_A Fibrillarin-like PRE-rR 99.4 1.6E-12 5.6E-17 115.8 14.1 145 177-332 53-203 (210)
98 2gs9_A Hypothetical protein TT 99.4 2E-12 6.9E-17 113.9 14.1 117 180-315 35-171 (211)
99 3grz_A L11 mtase, ribosomal pr 99.4 8.9E-13 3E-17 115.9 11.7 137 166-323 47-184 (205)
100 1fp1_D Isoliquiritigenin 2'-O- 99.4 2.3E-12 7.8E-17 124.3 15.0 138 170-323 197-359 (372)
101 2vdw_A Vaccinia virus capping 99.4 3.4E-13 1.2E-17 127.0 8.5 142 180-325 47-247 (302)
102 3m33_A Uncharacterized protein 99.4 9.7E-13 3.3E-17 117.9 10.9 133 179-335 46-179 (226)
103 2ipx_A RRNA 2'-O-methyltransfe 99.4 1.9E-12 6.4E-17 116.4 12.4 147 176-333 72-226 (233)
104 3q87_B N6 adenine specific DNA 99.4 2E-12 6.9E-17 111.1 11.8 120 180-323 22-148 (170)
105 3id6_C Fibrillarin-like rRNA/T 99.4 3.9E-12 1.3E-16 115.4 14.1 155 166-332 58-224 (232)
106 3eey_A Putative rRNA methylase 99.4 1.2E-12 4.2E-17 114.2 10.2 145 177-325 18-174 (197)
107 3lpm_A Putative methyltransfer 99.4 3.5E-12 1.2E-16 116.8 13.1 142 173-323 40-200 (259)
108 2fca_A TRNA (guanine-N(7)-)-me 99.4 2.7E-12 9.1E-17 114.4 11.9 132 181-321 38-176 (213)
109 3p2e_A 16S rRNA methylase; met 99.4 2.8E-12 9.5E-17 115.6 11.8 153 179-338 22-200 (225)
110 2zfu_A Nucleomethylin, cerebra 99.4 5.6E-12 1.9E-16 111.5 13.4 115 178-323 64-178 (215)
111 2b3t_A Protein methyltransfera 99.4 1E-11 3.6E-16 114.6 14.9 141 167-321 96-260 (276)
112 1dus_A MJ0882; hypothetical pr 99.4 7.8E-12 2.7E-16 107.7 13.0 134 168-314 39-173 (194)
113 1l3i_A Precorrin-6Y methyltran 99.3 5.8E-12 2E-16 108.3 11.7 137 167-320 19-156 (192)
114 3bwc_A Spermidine synthase; SA 99.3 1.9E-12 6.4E-17 121.9 8.9 141 179-322 93-238 (304)
115 2nxc_A L11 mtase, ribosomal pr 99.3 3.5E-12 1.2E-16 116.8 9.8 138 164-323 105-243 (254)
116 1g8a_A Fibrillarin-like PRE-rR 99.3 2.6E-11 8.9E-16 108.3 14.9 153 167-331 56-219 (227)
117 1xdz_A Methyltransferase GIDB; 99.3 1E-11 3.5E-16 112.3 11.5 133 178-323 67-201 (240)
118 3mb5_A SAM-dependent methyltra 99.3 1.2E-11 4.1E-16 112.3 11.7 138 167-322 79-220 (255)
119 3fpf_A Mtnas, putative unchara 99.3 1.5E-11 5E-16 115.2 12.4 105 176-294 117-222 (298)
120 1yb2_A Hypothetical protein TA 99.3 1E-11 3.4E-16 114.8 11.0 136 171-323 100-236 (275)
121 3p9n_A Possible methyltransfer 99.3 4.3E-12 1.5E-16 110.3 8.0 121 167-295 31-154 (189)
122 2y1w_A Histone-arginine methyl 99.3 7.2E-12 2.4E-16 120.0 10.0 115 170-293 39-154 (348)
123 2yxd_A Probable cobalt-precorr 99.3 3.6E-11 1.2E-15 102.6 13.3 135 166-322 20-155 (183)
124 3lbf_A Protein-L-isoaspartate 99.3 1E-11 3.6E-16 109.3 10.2 113 166-295 62-175 (210)
125 3hp7_A Hemolysin, putative; st 99.3 3.2E-11 1.1E-15 112.8 13.9 139 169-323 72-231 (291)
126 1jsx_A Glucose-inhibited divis 99.3 5.2E-12 1.8E-16 110.9 8.1 121 181-322 65-186 (207)
127 2pxx_A Uncharacterized protein 99.3 1.1E-11 3.9E-16 108.6 10.4 132 168-316 31-175 (215)
128 2frn_A Hypothetical protein PH 99.3 4.6E-11 1.6E-15 110.8 14.8 138 168-320 114-253 (278)
129 1fp2_A Isoflavone O-methyltran 99.3 2.6E-11 9E-16 115.9 13.5 131 178-323 185-340 (352)
130 2qe6_A Uncharacterized protein 99.3 3.3E-11 1.1E-15 111.7 13.3 144 168-320 63-238 (274)
131 2avn_A Ubiquinone/menaquinone 99.3 1.7E-11 5.9E-16 111.9 11.1 108 169-294 44-152 (260)
132 4dzr_A Protein-(glutamine-N5) 99.3 2.1E-12 7.2E-17 113.3 4.8 142 167-322 15-190 (215)
133 3dmg_A Probable ribosomal RNA 99.3 5E-11 1.7E-15 115.7 14.5 144 166-323 216-372 (381)
134 3fzg_A 16S rRNA methylase; met 99.3 1.2E-11 4E-16 108.5 8.7 144 166-324 36-187 (200)
135 2ld4_A Anamorsin; methyltransf 99.3 3.3E-11 1.1E-15 103.3 11.1 114 177-316 8-128 (176)
136 3bgv_A MRNA CAP guanine-N7 met 99.2 1.3E-11 4.4E-16 115.9 9.1 111 179-293 32-154 (313)
137 3dr5_A Putative O-methyltransf 99.2 1.1E-11 3.8E-16 111.3 8.2 120 167-293 42-162 (221)
138 2ozv_A Hypothetical protein AT 99.2 4.4E-11 1.5E-15 109.9 12.3 141 173-322 28-192 (260)
139 1vbf_A 231AA long hypothetical 99.2 2.8E-11 9.7E-16 108.1 10.8 112 166-295 55-166 (231)
140 1af7_A Chemotaxis receptor met 99.2 3.7E-11 1.3E-15 111.5 11.8 113 181-295 105-253 (274)
141 3uwp_A Histone-lysine N-methyl 99.2 1.6E-11 5.4E-16 119.6 9.5 124 165-293 157-287 (438)
142 3g89_A Ribosomal RNA small sub 99.2 2.6E-11 9E-16 110.9 10.5 133 179-324 78-212 (249)
143 2plw_A Ribosomal RNA methyltra 99.2 1.1E-10 3.9E-15 101.8 14.2 132 169-321 10-176 (201)
144 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1.5E-11 5.1E-16 110.3 8.7 131 181-320 34-173 (218)
145 2h00_A Methyltransferase 10 do 99.2 7.7E-12 2.6E-16 113.8 6.9 139 181-323 65-237 (254)
146 3kr9_A SAM-dependent methyltra 99.2 6.2E-11 2.1E-15 106.9 12.6 129 178-322 12-141 (225)
147 3bzb_A Uncharacterized protein 99.2 4.8E-11 1.6E-15 110.8 12.2 157 161-322 59-235 (281)
148 3htx_A HEN1; HEN1, small RNA m 99.2 3.9E-11 1.3E-15 124.9 12.7 122 166-293 706-833 (950)
149 1ej0_A FTSJ; methyltransferase 99.2 3.3E-11 1.1E-15 101.8 10.1 132 171-322 12-159 (180)
150 3r0q_C Probable protein argini 99.2 1.7E-11 5.9E-16 118.7 9.4 117 169-293 51-168 (376)
151 1dl5_A Protein-L-isoaspartate 99.2 4.9E-11 1.7E-15 112.6 11.7 114 166-294 60-175 (317)
152 3u81_A Catechol O-methyltransf 99.2 8E-12 2.7E-16 111.5 6.0 131 177-318 54-191 (221)
153 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.4E-10 4.7E-15 105.1 14.2 139 166-322 81-222 (258)
154 3tfw_A Putative O-methyltransf 99.2 3.8E-11 1.3E-15 109.3 10.2 108 178-294 60-170 (248)
155 4dcm_A Ribosomal RNA large sub 99.2 5.6E-11 1.9E-15 115.1 11.7 118 171-294 212-334 (375)
156 3ntv_A MW1564 protein; rossman 99.2 1.7E-11 5.6E-16 110.5 7.2 107 177-293 67-175 (232)
157 2ift_A Putative methylase HI07 99.2 2.5E-11 8.7E-16 107.0 8.0 108 181-295 53-164 (201)
158 3b3j_A Histone-arginine methyl 99.2 4E-11 1.4E-15 119.8 10.3 116 169-293 146-262 (480)
159 1o54_A SAM-dependent O-methylt 99.2 1.2E-10 4.1E-15 107.5 12.7 137 168-322 99-237 (277)
160 3lec_A NADB-rossmann superfami 99.2 7E-11 2.4E-15 106.8 10.8 129 178-322 18-147 (230)
161 3opn_A Putative hemolysin; str 99.2 5.2E-11 1.8E-15 107.9 9.9 140 168-323 23-183 (232)
162 2yxe_A Protein-L-isoaspartate 99.2 1.6E-10 5.5E-15 102.0 12.8 114 167-295 63-178 (215)
163 3ckk_A TRNA (guanine-N(7)-)-me 99.2 8E-11 2.7E-15 106.7 10.9 137 178-321 43-192 (235)
164 1ixk_A Methyltransferase; open 99.2 1.3E-10 4.6E-15 109.7 12.2 156 160-322 97-273 (315)
165 3gnl_A Uncharacterized protein 99.2 1.6E-10 5.5E-15 105.3 12.2 129 178-322 18-147 (244)
166 3q7e_A Protein arginine N-meth 99.2 5.3E-11 1.8E-15 114.1 9.5 110 177-293 62-172 (349)
167 2esr_A Methyltransferase; stru 99.2 3.8E-11 1.3E-15 102.9 7.6 109 179-295 29-139 (177)
168 2fyt_A Protein arginine N-meth 99.2 8.1E-11 2.8E-15 112.4 10.7 113 171-291 54-168 (340)
169 1zg3_A Isoflavanone 4'-O-methy 99.2 1.2E-10 4.2E-15 111.5 11.9 131 178-323 190-346 (358)
170 3gdh_A Trimethylguanosine synt 99.2 1.9E-12 6.6E-17 116.6 -0.7 132 180-322 77-217 (241)
171 1jg1_A PIMT;, protein-L-isoasp 99.2 1.2E-10 4.3E-15 104.7 11.2 114 166-295 76-190 (235)
172 2pjd_A Ribosomal RNA small sub 99.2 1.2E-10 3.9E-15 111.3 11.3 117 169-295 184-304 (343)
173 1u2z_A Histone-lysine N-methyl 99.2 1.7E-10 5.7E-15 113.6 12.3 124 167-294 228-359 (433)
174 2gpy_A O-methyltransferase; st 99.2 6.4E-11 2.2E-15 106.2 8.3 115 170-293 43-159 (233)
175 1o9g_A RRNA methyltransferase; 99.2 4.9E-11 1.7E-15 108.3 7.7 123 168-294 38-214 (250)
176 3adn_A Spermidine synthase; am 99.1 1.3E-10 4.4E-15 109.0 10.5 136 180-320 82-223 (294)
177 2yvl_A TRMI protein, hypotheti 99.1 5.3E-10 1.8E-14 100.6 13.7 131 169-320 79-211 (248)
178 4azs_A Methyltransferase WBDD; 99.1 1.2E-11 4.1E-16 126.0 2.6 108 179-293 64-172 (569)
179 3duw_A OMT, O-methyltransferas 99.1 1.1E-10 3.7E-15 103.9 8.2 107 178-293 55-166 (223)
180 2fhp_A Methylase, putative; al 99.1 6.6E-11 2.2E-15 101.7 6.6 120 168-295 30-155 (187)
181 1ws6_A Methyltransferase; stru 99.1 3.5E-11 1.2E-15 101.8 4.5 105 179-295 39-148 (171)
182 2nyu_A Putative ribosomal RNA 99.1 4.5E-10 1.5E-14 97.5 11.5 135 169-321 10-167 (196)
183 3tr6_A O-methyltransferase; ce 99.1 6.4E-11 2.2E-15 105.4 6.2 108 178-294 61-174 (225)
184 2bm8_A Cephalosporin hydroxyla 99.1 2.6E-10 8.8E-15 103.3 10.3 126 180-319 80-214 (236)
185 3tma_A Methyltransferase; thum 99.1 1.1E-09 3.9E-14 104.7 15.0 145 164-323 186-338 (354)
186 2fpo_A Methylase YHHF; structu 99.1 1.4E-10 4.7E-15 102.3 7.9 105 181-295 54-161 (202)
187 1g6q_1 HnRNP arginine N-methyl 99.1 1.7E-10 5.9E-15 109.5 9.0 114 171-292 28-143 (328)
188 2igt_A SAM dependent methyltra 99.1 4.6E-10 1.6E-14 106.9 11.9 134 179-319 151-299 (332)
189 1p91_A Ribosomal RNA large sub 99.1 8.1E-10 2.8E-14 100.9 12.9 109 165-294 70-178 (269)
190 1i9g_A Hypothetical protein RV 99.1 7E-10 2.4E-14 102.0 12.2 139 166-320 84-226 (280)
191 1r18_A Protein-L-isoaspartate( 99.1 4.3E-10 1.5E-14 100.5 9.9 114 169-295 70-195 (227)
192 3giw_A Protein of unknown func 99.1 1.1E-09 3.8E-14 101.4 12.6 108 183-294 80-200 (277)
193 1nv8_A HEMK protein; class I a 99.1 7.4E-10 2.5E-14 103.1 11.2 133 168-314 110-264 (284)
194 1sui_A Caffeoyl-COA O-methyltr 99.0 1.7E-10 5.9E-15 105.2 6.3 106 179-293 77-189 (247)
195 1i1n_A Protein-L-isoaspartate 99.0 8.3E-10 2.8E-14 98.2 10.6 113 170-295 64-183 (226)
196 2vdv_E TRNA (guanine-N(7)-)-me 99.0 1.8E-09 6.1E-14 97.9 13.0 125 178-316 46-191 (246)
197 1iy9_A Spermidine synthase; ro 99.0 3.2E-10 1.1E-14 105.1 8.1 136 180-320 74-214 (275)
198 3c3p_A Methyltransferase; NP_9 99.0 1.5E-10 5.1E-15 102.2 5.4 103 180-293 55-159 (210)
199 1mjf_A Spermidine synthase; sp 99.0 4E-10 1.4E-14 104.7 8.2 134 180-320 74-218 (281)
200 2yxl_A PH0851 protein, 450AA l 99.0 2.5E-09 8.6E-14 105.8 14.4 156 160-321 238-416 (450)
201 2pbf_A Protein-L-isoaspartate 99.0 5.8E-10 2E-14 99.3 8.9 107 178-295 77-194 (227)
202 3r3h_A O-methyltransferase, SA 99.0 5.7E-11 1.9E-15 108.1 2.3 107 178-293 57-169 (242)
203 4hc4_A Protein arginine N-meth 99.0 3.1E-10 1.1E-14 109.8 7.6 108 178-293 80-188 (376)
204 2hnk_A SAM-dependent O-methylt 99.0 1.2E-10 4.3E-15 104.9 4.5 114 172-294 51-181 (239)
205 3lcv_B Sisomicin-gentamicin re 99.0 1E-09 3.5E-14 100.5 10.1 146 167-325 120-273 (281)
206 3dou_A Ribosomal RNA large sub 99.0 2E-09 6.9E-14 94.3 11.7 132 169-322 13-162 (191)
207 2i7c_A Spermidine synthase; tr 99.0 7.3E-10 2.5E-14 103.1 9.3 137 179-320 76-217 (283)
208 3a27_A TYW2, uncharacterized p 99.0 3.9E-09 1.3E-13 97.5 14.1 127 177-317 115-244 (272)
209 3tm4_A TRNA (guanine N2-)-meth 99.0 2.7E-09 9.2E-14 103.1 13.0 142 165-322 202-350 (373)
210 2ih2_A Modification methylase 99.0 1.8E-09 6E-14 105.2 11.6 134 167-316 25-186 (421)
211 1xj5_A Spermidine synthase 1; 99.0 6.1E-10 2.1E-14 106.2 7.8 113 179-295 118-236 (334)
212 2oxt_A Nucleoside-2'-O-methylt 99.0 2.5E-09 8.7E-14 98.7 11.7 115 168-294 61-185 (265)
213 2pt6_A Spermidine synthase; tr 99.0 8.6E-10 3E-14 104.5 8.7 136 180-320 115-255 (321)
214 2avd_A Catechol-O-methyltransf 99.0 4.1E-10 1.4E-14 100.4 6.1 107 178-293 66-178 (229)
215 2b2c_A Spermidine synthase; be 99.0 5.5E-10 1.9E-14 105.6 7.0 135 180-320 107-247 (314)
216 3gjy_A Spermidine synthase; AP 99.0 1.9E-09 6.4E-14 101.9 10.6 108 183-294 91-200 (317)
217 2wa2_A Non-structural protein 99.0 4.9E-10 1.7E-14 104.1 6.4 114 169-294 70-193 (276)
218 3c3y_A Pfomt, O-methyltransfer 99.0 5.3E-10 1.8E-14 101.1 6.4 106 179-293 68-180 (237)
219 1uir_A Polyamine aminopropyltr 99.0 1.3E-09 4.5E-14 102.9 9.4 136 180-320 76-221 (314)
220 1ne2_A Hypothetical protein TA 99.0 9.2E-09 3.2E-13 89.7 14.1 130 167-321 38-167 (200)
221 2f8l_A Hypothetical protein LM 99.0 3.7E-09 1.3E-13 100.8 12.4 131 178-317 127-279 (344)
222 1sqg_A SUN protein, FMU protei 99.0 5.4E-09 1.8E-13 102.8 13.9 158 157-320 222-400 (429)
223 3cbg_A O-methyltransferase; cy 99.0 2.5E-10 8.5E-15 102.8 3.9 106 179-293 70-181 (232)
224 2b25_A Hypothetical protein; s 99.0 4.5E-09 1.5E-13 99.7 12.6 146 169-325 93-282 (336)
225 1inl_A Spermidine synthase; be 99.0 9E-10 3.1E-14 103.2 7.6 136 180-320 89-230 (296)
226 1zq9_A Probable dimethyladenos 98.9 1E-09 3.6E-14 102.1 7.5 115 166-291 13-144 (285)
227 2o07_A Spermidine synthase; st 98.9 7.8E-10 2.7E-14 104.0 6.1 113 179-295 93-210 (304)
228 3ajd_A Putative methyltransfer 98.9 1.6E-09 5.6E-14 100.0 8.2 140 176-321 78-238 (274)
229 1wy7_A Hypothetical protein PH 98.9 1.7E-08 5.7E-13 88.4 14.2 128 178-323 46-174 (207)
230 2jjq_A Uncharacterized RNA met 98.9 1.6E-08 5.4E-13 99.5 14.3 137 166-330 278-415 (425)
231 3sso_A Methyltransferase; macr 98.9 2E-09 6.9E-14 104.4 7.7 110 167-294 203-324 (419)
232 2cmg_A Spermidine synthase; tr 98.9 6.1E-09 2.1E-13 95.9 9.7 99 180-295 71-172 (262)
233 2p41_A Type II methyltransfera 98.9 1.1E-08 3.6E-13 96.4 11.5 110 173-294 74-191 (305)
234 3m6w_A RRNA methylase; rRNA me 98.9 2.7E-09 9.1E-14 105.9 7.6 143 173-322 93-257 (464)
235 3k6r_A Putative transferase PH 98.9 1.6E-08 5.4E-13 93.9 12.1 129 179-320 123-253 (278)
236 2b78_A Hypothetical protein SM 98.9 3.1E-09 1.1E-13 103.1 7.5 138 180-321 211-359 (385)
237 3m4x_A NOL1/NOP2/SUN family pr 98.8 3.9E-09 1.3E-13 104.6 8.0 143 173-322 97-261 (456)
238 3frh_A 16S rRNA methylase; met 98.8 1E-08 3.6E-13 92.9 9.9 113 167-295 94-206 (253)
239 2qm3_A Predicted methyltransfe 98.8 9.7E-08 3.3E-12 92.0 17.1 129 179-320 170-305 (373)
240 1uwv_A 23S rRNA (uracil-5-)-me 98.8 3E-08 1E-12 97.5 13.7 151 166-334 271-425 (433)
241 2xyq_A Putative 2'-O-methyl tr 98.8 1.8E-08 6.3E-13 94.1 10.7 120 177-322 59-195 (290)
242 3c0k_A UPF0064 protein YCCW; P 98.8 1.2E-08 4.1E-13 99.2 9.8 151 161-318 203-364 (396)
243 2yx1_A Hypothetical protein MJ 98.8 8.4E-09 2.9E-13 98.2 8.0 125 179-325 193-318 (336)
244 2frx_A Hypothetical protein YE 98.8 3.5E-08 1.2E-12 98.4 12.4 135 175-315 109-266 (479)
245 4dmg_A Putative uncharacterize 98.8 3.2E-08 1.1E-12 96.3 11.6 140 166-319 201-352 (393)
246 2h1r_A Dimethyladenosine trans 98.8 2.3E-08 7.7E-13 93.7 9.4 117 160-288 21-153 (299)
247 3v97_A Ribosomal RNA large sub 98.7 2.2E-08 7.6E-13 104.3 10.2 142 166-320 527-678 (703)
248 2okc_A Type I restriction enzy 98.7 3.3E-08 1.1E-12 97.6 10.9 148 167-319 157-334 (445)
249 1wxx_A TT1595, hypothetical pr 98.7 3.5E-08 1.2E-12 95.4 10.5 131 181-317 209-349 (382)
250 2as0_A Hypothetical protein PH 98.7 3E-08 1E-12 96.2 9.8 132 180-319 216-361 (396)
251 1yub_A Ermam, rRNA methyltrans 98.7 1.2E-09 4.1E-14 99.2 -0.6 116 167-293 15-144 (245)
252 1qam_A ERMC' methyltransferase 98.7 5.2E-08 1.8E-12 88.5 9.6 96 160-264 9-104 (244)
253 3bt7_A TRNA (uracil-5-)-methyl 98.5 1.1E-07 3.7E-12 91.6 7.8 148 166-334 199-362 (369)
254 3gru_A Dimethyladenosine trans 98.5 2.1E-07 7.2E-12 87.1 8.1 91 165-264 34-124 (295)
255 3fut_A Dimethyladenosine trans 98.4 4.7E-07 1.6E-11 83.7 8.9 102 166-278 32-133 (271)
256 3tqs_A Ribosomal RNA small sub 98.4 4.4E-07 1.5E-11 83.1 8.6 91 166-264 14-106 (255)
257 3evf_A RNA-directed RNA polyme 98.4 1.1E-06 3.9E-11 80.7 9.3 119 167-294 60-184 (277)
258 2qfm_A Spermine synthase; sper 98.3 8.4E-07 2.9E-11 85.0 7.5 111 181-295 188-315 (364)
259 2ar0_A M.ecoki, type I restric 98.3 2.1E-06 7.1E-11 86.8 10.2 146 167-315 155-334 (541)
260 3ldu_A Putative methylase; str 98.3 2.5E-06 8.4E-11 82.7 10.2 124 164-294 178-344 (385)
261 3ldg_A Putative uncharacterize 98.3 6.6E-06 2.3E-10 79.7 13.2 124 164-294 177-343 (384)
262 2qy6_A UPF0209 protein YFCK; s 98.3 8.2E-07 2.8E-11 81.4 6.1 135 180-323 59-234 (257)
263 3k0b_A Predicted N6-adenine-sp 98.3 6.3E-06 2.2E-10 80.0 12.6 124 164-294 184-350 (393)
264 3b5i_A S-adenosyl-L-methionine 98.3 8.7E-06 3E-10 78.5 13.2 142 182-325 53-299 (374)
265 2dul_A N(2),N(2)-dimethylguano 98.2 2.3E-06 7.9E-11 82.7 8.2 102 181-294 47-164 (378)
266 3ftd_A Dimethyladenosine trans 98.2 5E-06 1.7E-10 75.7 9.9 74 165-246 15-88 (249)
267 2r6z_A UPF0341 protein in RSP 98.2 3.4E-07 1.2E-11 84.0 1.4 93 173-267 75-174 (258)
268 3axs_A Probable N(2),N(2)-dime 98.2 1.6E-06 5.4E-11 84.2 5.7 106 180-294 51-158 (392)
269 4gqb_A Protein arginine N-meth 98.2 3.5E-06 1.2E-10 86.3 8.4 105 181-291 357-464 (637)
270 3khk_A Type I restriction-modi 98.2 3.6E-06 1.2E-10 85.1 8.4 144 167-316 231-419 (544)
271 1m6y_A S-adenosyl-methyltransf 98.2 1.5E-06 5E-11 81.6 5.1 89 170-262 15-106 (301)
272 2b9e_A NOL1/NOP2/SUN domain fa 98.1 7.2E-06 2.5E-10 77.1 9.8 137 176-319 97-260 (309)
273 3o4f_A Spermidine synthase; am 98.1 1.3E-05 4.4E-10 74.7 11.2 137 180-320 82-223 (294)
274 2efj_A 3,7-dimethylxanthine me 98.1 4.2E-05 1.4E-09 73.9 14.9 140 182-325 53-293 (384)
275 3uzu_A Ribosomal RNA small sub 98.1 5.6E-06 1.9E-10 76.7 8.3 75 165-246 26-102 (279)
276 3gcz_A Polyprotein; flavivirus 98.1 4.4E-06 1.5E-10 76.9 7.0 118 168-294 77-201 (282)
277 3v97_A Ribosomal RNA large sub 98.1 2.3E-05 7.7E-10 81.6 12.3 126 164-293 173-346 (703)
278 1qyr_A KSGA, high level kasuga 98.0 6.5E-06 2.2E-10 75.2 7.1 95 167-270 7-105 (252)
279 3s1s_A Restriction endonucleas 98.0 5.4E-05 1.9E-09 79.1 14.4 133 179-315 319-488 (878)
280 3lkd_A Type I restriction-modi 98.0 5.5E-05 1.9E-09 76.4 13.7 146 168-316 204-381 (542)
281 3ua3_A Protein arginine N-meth 98.0 7.2E-06 2.5E-10 84.3 7.1 109 182-292 410-532 (745)
282 3cvo_A Methyltransferase-like 97.9 4E-05 1.4E-09 67.6 9.1 100 180-292 29-152 (202)
283 2oyr_A UPF0341 protein YHIQ; a 97.8 3.1E-06 1.1E-10 77.6 0.8 107 171-285 76-192 (258)
284 3eld_A Methyltransferase; flav 97.8 8.5E-05 2.9E-09 68.8 10.5 116 169-294 69-191 (300)
285 2px2_A Genome polyprotein [con 97.8 6E-05 2E-09 68.5 8.5 120 161-293 53-182 (269)
286 3ll7_A Putative methyltransfer 97.7 9.4E-06 3.2E-10 79.1 2.0 78 179-262 91-171 (410)
287 1m6e_X S-adenosyl-L-methionnin 97.7 7.2E-05 2.5E-09 71.6 7.7 110 181-293 51-208 (359)
288 3lkz_A Non-structural protein 97.6 0.00031 1.1E-08 65.0 10.9 121 164-293 77-203 (321)
289 4auk_A Ribosomal RNA large sub 97.6 0.00065 2.2E-08 65.1 13.2 121 178-319 208-335 (375)
290 2wk1_A NOVP; transferase, O-me 97.6 0.00024 8.3E-09 65.8 9.4 130 180-318 105-266 (282)
291 3ufb_A Type I restriction-modi 97.5 0.00055 1.9E-08 68.9 11.5 145 167-315 203-384 (530)
292 3vyw_A MNMC2; tRNA wobble urid 97.3 0.00083 2.8E-08 62.8 9.7 131 181-323 96-247 (308)
293 3p8z_A Mtase, non-structural p 97.3 0.0024 8.3E-08 57.3 11.9 119 165-293 62-185 (267)
294 2k4m_A TR8_protein, UPF0146 pr 97.1 0.00061 2.1E-08 56.8 5.9 96 166-293 22-120 (153)
295 3c6k_A Spermine synthase; sper 97.0 0.00084 2.9E-08 64.5 6.4 132 180-315 204-351 (381)
296 1wg8_A Predicted S-adenosylmet 97.0 0.00067 2.3E-08 62.6 5.4 83 170-261 11-96 (285)
297 4fzv_A Putative methyltransfer 96.8 0.0025 8.7E-08 60.9 8.1 113 177-293 144-283 (359)
298 3r24_A NSP16, 2'-O-methyl tran 96.7 0.0081 2.8E-07 55.6 9.7 128 169-322 92-239 (344)
299 2zig_A TTHA0409, putative modi 96.3 0.0047 1.6E-07 57.1 6.1 52 167-221 222-273 (297)
300 2vz8_A Fatty acid synthase; tr 95.0 0.0026 8.8E-08 74.7 -1.6 130 180-321 1239-1392(2512)
301 3tka_A Ribosomal RNA small sub 95.0 0.03 1E-06 52.8 5.8 85 170-261 46-135 (347)
302 1i4w_A Mitochondrial replicati 94.8 0.044 1.5E-06 52.1 6.7 82 159-246 30-117 (353)
303 3ps9_A TRNA 5-methylaminomethy 94.2 0.1 3.6E-06 53.4 8.4 62 252-322 177-239 (676)
304 3pvc_A TRNA 5-methylaminomethy 93.8 0.082 2.8E-06 54.5 6.6 132 181-322 58-231 (689)
305 1rjd_A PPM1P, carboxy methyl t 93.7 0.28 9.4E-06 46.2 9.6 110 180-293 96-231 (334)
306 1f8f_A Benzyl alcohol dehydrog 93.7 0.31 1.1E-05 45.9 10.0 102 173-293 182-288 (371)
307 1g60_A Adenine-specific methyl 93.2 0.13 4.5E-06 46.3 6.1 52 167-221 199-250 (260)
308 2zig_A TTHA0409, putative modi 92.5 0.25 8.6E-06 45.3 7.1 85 235-320 21-132 (297)
309 2dph_A Formaldehyde dismutase; 91.9 0.56 1.9E-05 44.7 9.1 105 175-293 179-298 (398)
310 1boo_A Protein (N-4 cytosine-s 91.3 0.26 8.9E-06 45.9 5.8 85 235-320 14-116 (323)
311 1kol_A Formaldehyde dehydrogen 91.2 0.92 3.1E-05 43.1 9.7 105 176-293 180-299 (398)
312 3s2e_A Zinc-containing alcohol 91.0 0.51 1.8E-05 43.8 7.6 100 175-293 160-262 (340)
313 3two_A Mannitol dehydrogenase; 90.3 0.81 2.8E-05 42.6 8.3 93 176-293 171-264 (348)
314 1pl8_A Human sorbitol dehydrog 90.1 0.86 3E-05 42.6 8.3 100 175-293 165-272 (356)
315 3tos_A CALS11; methyltransfera 90.0 2 7E-05 38.7 10.3 133 182-321 70-244 (257)
316 4ej6_A Putative zinc-binding d 89.8 0.53 1.8E-05 44.4 6.6 100 175-293 176-283 (370)
317 1pqw_A Polyketide synthase; ro 89.5 0.68 2.3E-05 39.2 6.5 99 175-293 32-136 (198)
318 2uyo_A Hypothetical protein ML 89.5 2.8 9.7E-05 38.7 11.2 104 183-294 104-218 (310)
319 4b7c_A Probable oxidoreductase 89.2 0.91 3.1E-05 41.9 7.6 103 171-293 139-247 (336)
320 3fpc_A NADP-dependent alcohol 88.8 0.24 8.1E-06 46.4 3.3 101 175-293 160-265 (352)
321 1v3u_A Leukotriene B4 12- hydr 88.4 1.5 5E-05 40.4 8.4 100 173-293 137-243 (333)
322 3m6i_A L-arabinitol 4-dehydrog 88.3 2.2 7.5E-05 39.8 9.7 102 175-293 173-282 (363)
323 1uuf_A YAHK, zinc-type alcohol 88.3 0.82 2.8E-05 43.1 6.7 96 177-293 190-287 (369)
324 3uog_A Alcohol dehydrogenase; 88.2 0.85 2.9E-05 42.8 6.7 101 173-293 181-286 (363)
325 3uko_A Alcohol dehydrogenase c 88.1 2.4 8.4E-05 39.8 10.0 102 173-293 185-294 (378)
326 1e3j_A NADP(H)-dependent ketos 87.9 1.9 6.4E-05 40.1 8.9 100 175-293 162-270 (352)
327 1cdo_A Alcohol dehydrogenase; 87.8 1.7 5.6E-05 40.9 8.5 103 173-293 184-293 (374)
328 1p0f_A NADP-dependent alcohol 87.4 3 0.0001 39.1 10.0 102 173-293 183-292 (373)
329 2jhf_A Alcohol dehydrogenase E 87.2 2.1 7.1E-05 40.2 8.8 102 173-293 183-292 (374)
330 3ip1_A Alcohol dehydrogenase, 86.8 0.89 3E-05 43.4 6.0 101 178-293 210-317 (404)
331 1e3i_A Alcohol dehydrogenase, 86.7 2.1 7.1E-05 40.2 8.5 103 173-293 187-296 (376)
332 2fzw_A Alcohol dehydrogenase c 86.0 3.8 0.00013 38.3 10.0 102 173-293 182-291 (373)
333 3iht_A S-adenosyl-L-methionine 85.8 2.2 7.4E-05 35.7 7.0 50 165-215 25-74 (174)
334 1zkd_A DUF185; NESG, RPR58, st 85.1 6.6 0.00022 37.5 11.1 42 177-218 76-124 (387)
335 3qwb_A Probable quinone oxidor 85.0 1.7 5.6E-05 40.1 6.8 99 175-293 142-246 (334)
336 4dvj_A Putative zinc-dependent 84.9 1.2 4.2E-05 41.8 5.9 102 173-293 158-269 (363)
337 3gms_A Putative NADPH:quinone 84.7 0.28 9.7E-06 45.6 1.3 102 172-293 135-242 (340)
338 3jv7_A ADH-A; dehydrogenase, n 84.5 0.95 3.2E-05 42.0 4.9 97 178-293 168-269 (345)
339 3g7u_A Cytosine-specific methy 84.3 5.3 0.00018 37.9 10.1 124 183-318 3-145 (376)
340 2j3h_A NADP-dependent oxidored 84.1 2.2 7.6E-05 39.3 7.3 101 173-293 147-254 (345)
341 2c0c_A Zinc binding alcohol de 83.8 2.9 9.8E-05 39.1 7.9 100 173-293 155-260 (362)
342 3fwz_A Inner membrane protein 83.3 1.9 6.4E-05 34.5 5.6 112 182-319 7-122 (140)
343 3jyn_A Quinone oxidoreductase; 83.1 0.54 1.8E-05 43.4 2.5 101 173-293 132-238 (325)
344 2h6e_A ADH-4, D-arabinose 1-de 82.9 1 3.5E-05 41.8 4.4 98 178-293 168-268 (344)
345 1g55_A DNA cytosine methyltran 82.7 6.9 0.00024 36.4 10.1 125 183-320 3-145 (343)
346 2py6_A Methyltransferase FKBM; 82.4 2.1 7.2E-05 41.1 6.5 47 178-225 223-270 (409)
347 4a2c_A Galactitol-1-phosphate 82.4 8.7 0.0003 35.2 10.6 102 174-293 153-259 (346)
348 3iei_A Leucine carboxyl methyl 82.3 8.8 0.0003 35.8 10.6 135 181-322 90-279 (334)
349 1yb5_A Quinone oxidoreductase; 82.1 3.6 0.00012 38.2 7.9 101 173-293 162-268 (351)
350 1jvb_A NAD(H)-dependent alcoho 81.4 3.3 0.00011 38.3 7.3 100 176-293 165-270 (347)
351 2eih_A Alcohol dehydrogenase; 80.9 3.7 0.00013 37.9 7.4 97 177-293 162-264 (343)
352 3fbg_A Putative arginate lyase 80.6 1.2 4.2E-05 41.3 4.0 100 173-293 136-247 (346)
353 1g60_A Adenine-specific methyl 80.5 1.3 4.6E-05 39.5 4.1 63 252-320 21-95 (260)
354 4eye_A Probable oxidoreductase 80.5 0.57 2E-05 43.6 1.7 100 173-293 151-256 (342)
355 1rjw_A ADH-HT, alcohol dehydro 80.4 3.1 0.0001 38.4 6.7 98 177-293 160-260 (339)
356 2hcy_A Alcohol dehydrogenase 1 80.0 4.9 0.00017 37.1 8.0 98 177-293 165-268 (347)
357 2d8a_A PH0655, probable L-thre 79.9 0.96 3.3E-05 42.1 3.0 100 175-293 162-266 (348)
358 4f3n_A Uncharacterized ACR, CO 79.5 2.9 0.0001 40.6 6.3 36 182-217 138-178 (432)
359 1eg2_A Modification methylase 79.2 3.1 0.00011 38.6 6.2 83 237-320 40-136 (319)
360 1iz0_A Quinone oxidoreductase; 78.5 2 6.7E-05 39.0 4.6 92 179-293 123-217 (302)
361 1qor_A Quinone oxidoreductase; 77.2 3.4 0.00012 37.8 5.8 98 176-293 135-238 (327)
362 1piw_A Hypothetical zinc-type 77.1 1.4 4.8E-05 41.2 3.2 99 177-293 175-275 (360)
363 3nx4_A Putative oxidoreductase 76.8 4.6 0.00016 36.8 6.7 96 177-293 141-240 (324)
364 4dup_A Quinone oxidoreductase; 76.7 3.4 0.00011 38.4 5.7 101 173-293 159-264 (353)
365 4eez_A Alcohol dehydrogenase 1 76.6 16 0.00053 33.4 10.3 100 176-293 158-262 (348)
366 2oo3_A Protein involved in cat 76.4 3.4 0.00012 37.8 5.5 139 168-322 82-224 (283)
367 2zb4_A Prostaglandin reductase 76.3 12 0.00042 34.5 9.5 102 173-293 150-259 (357)
368 2c7p_A Modification methylase 75.7 35 0.0012 31.5 12.4 123 182-320 11-149 (327)
369 3qv2_A 5-cytosine DNA methyltr 75.4 28 0.00097 32.1 11.7 125 182-321 10-157 (327)
370 2j8z_A Quinone oxidoreductase; 75.3 5.4 0.00018 37.0 6.8 99 175-293 156-260 (354)
371 1wly_A CAAR, 2-haloacrylate re 75.2 6.6 0.00023 35.9 7.3 99 175-293 139-243 (333)
372 4dcm_A Ribosomal RNA large sub 74.7 16 0.00055 34.4 10.0 99 181-294 38-136 (375)
373 1boo_A Protein (N-4 cytosine-s 74.5 5.6 0.00019 36.7 6.6 51 168-221 240-290 (323)
374 3tqh_A Quinone oxidoreductase; 74.2 11 0.00039 34.2 8.6 96 175-293 146-244 (321)
375 3gaz_A Alcohol dehydrogenase s 73.8 6.3 0.00022 36.4 6.8 98 173-293 142-245 (343)
376 1vj0_A Alcohol dehydrogenase, 73.6 5.9 0.0002 37.2 6.6 100 176-293 189-297 (380)
377 2dq4_A L-threonine 3-dehydroge 73.5 0.95 3.2E-05 42.0 1.0 97 176-293 160-261 (343)
378 1lss_A TRK system potassium up 71.7 24 0.00081 27.0 8.9 112 182-319 4-119 (140)
379 3goh_A Alcohol dehydrogenase, 71.2 2 6.7E-05 39.2 2.6 92 175-293 136-228 (315)
380 2zwa_A Leucine carboxyl methyl 69.9 33 0.0011 34.9 11.7 136 181-322 107-307 (695)
381 3c85_A Putative glutathione-re 69.4 18 0.00061 29.7 8.1 112 182-319 39-156 (183)
382 1zsy_A Mitochondrial 2-enoyl t 69.3 25 0.00087 32.3 9.9 104 173-293 159-269 (357)
383 1xa0_A Putative NADPH dependen 68.2 5.4 0.00018 36.4 4.9 96 177-293 144-245 (328)
384 2b5w_A Glucose dehydrogenase; 68.0 7.8 0.00027 35.9 6.0 100 177-293 162-272 (357)
385 3ius_A Uncharacterized conserv 67.8 22 0.00075 31.1 8.8 95 183-292 6-100 (286)
386 3krt_A Crotonyl COA reductase; 66.8 5.7 0.0002 38.3 5.0 97 177-293 224-343 (456)
387 3l9w_A Glutathione-regulated p 63.9 17 0.00057 34.8 7.6 94 182-293 4-101 (413)
388 3gqv_A Enoyl reductase; medium 63.6 23 0.0008 32.8 8.5 93 180-293 163-262 (371)
389 4a0s_A Octenoyl-COA reductase/ 62.7 9.3 0.00032 36.6 5.6 97 177-293 216-335 (447)
390 3h2s_A Putative NADH-flavin re 61.5 39 0.0013 28.1 8.9 100 184-293 2-103 (224)
391 2vn8_A Reticulon-4-interacting 60.6 11 0.00037 35.1 5.5 96 179-293 181-279 (375)
392 2cdc_A Glucose dehydrogenase g 59.8 8.6 0.00029 35.7 4.6 96 176-293 166-277 (366)
393 1eg2_A Modification methylase 59.4 22 0.00075 32.7 7.3 52 167-221 229-283 (319)
394 1tt7_A YHFP; alcohol dehydroge 59.1 26 0.00088 31.7 7.7 96 177-293 145-246 (330)
395 2cf5_A Atccad5, CAD, cinnamyl 56.2 9.9 0.00034 35.2 4.4 96 177-293 175-274 (357)
396 2aef_A Calcium-gated potassium 55.9 71 0.0024 27.1 9.7 95 181-293 8-104 (234)
397 4h0n_A DNMT2; SAH binding, tra 54.3 33 0.0011 31.8 7.6 126 183-321 4-146 (333)
398 2g1u_A Hypothetical protein TM 53.9 45 0.0016 26.4 7.6 112 180-317 17-133 (155)
399 1yqd_A Sinapyl alcohol dehydro 53.3 12 0.00041 34.8 4.4 96 177-293 182-281 (366)
400 1id1_A Putative potassium chan 52.4 19 0.00063 28.7 4.9 98 182-293 3-104 (153)
401 4a27_A Synaptic vesicle membra 51.6 17 0.00058 33.4 5.2 98 173-293 134-237 (349)
402 3ubt_Y Modification methylase 50.5 1.4E+02 0.0048 26.7 13.4 125 183-320 1-139 (331)
403 3ek2_A Enoyl-(acyl-carrier-pro 50.0 55 0.0019 28.2 8.1 35 179-213 11-46 (271)
404 2f1k_A Prephenate dehydrogenas 49.2 1E+02 0.0036 26.7 9.9 87 184-291 2-88 (279)
405 3ggo_A Prephenate dehydrogenas 48.2 58 0.002 29.6 8.2 89 183-290 34-124 (314)
406 2vhw_A Alanine dehydrogenase; 47.6 8.7 0.0003 36.3 2.4 99 181-293 167-267 (377)
407 2km1_A Protein DRE2; yeast, an 47.2 12 0.00042 30.2 2.9 57 251-320 56-114 (136)
408 4e21_A 6-phosphogluconate dehy 43.4 51 0.0017 30.7 7.1 117 182-321 22-139 (358)
409 2hmt_A YUAA protein; RCK, KTN, 42.9 89 0.003 23.6 7.5 32 182-215 6-39 (144)
410 1lnq_A MTHK channels, potassiu 42.7 78 0.0027 28.6 8.2 94 182-293 115-210 (336)
411 3oig_A Enoyl-[acyl-carrier-pro 42.5 1.4E+02 0.0048 25.5 9.6 106 181-293 6-146 (266)
412 2eez_A Alanine dehydrogenase; 41.5 11 0.00039 35.2 2.2 98 182-293 166-265 (369)
413 2hwk_A Helicase NSP2; rossman 41.4 23 0.0008 32.4 4.1 75 244-322 196-279 (320)
414 4ezb_A Uncharacterized conserv 40.2 1.4E+02 0.0049 26.8 9.5 112 183-320 25-144 (317)
415 3l4b_C TRKA K+ channel protien 39.0 36 0.0012 28.7 4.9 93 184-293 2-98 (218)
416 3ce6_A Adenosylhomocysteinase; 38.6 20 0.0007 35.2 3.6 90 179-293 271-360 (494)
417 1pjc_A Protein (L-alanine dehy 38.2 14 0.00048 34.5 2.3 99 182-293 167-266 (361)
418 2g5c_A Prephenate dehydrogenas 38.1 1.1E+02 0.0037 26.7 8.2 33 254-292 62-94 (281)
419 3d1l_A Putative NADP oxidoredu 36.8 1.1E+02 0.0036 26.5 7.8 32 254-291 68-99 (266)
420 2duw_A Putative COA-binding pr 36.1 56 0.0019 26.0 5.4 107 183-320 14-122 (145)
421 1y81_A Conserved hypothetical 35.6 1.2E+02 0.0042 23.8 7.3 108 180-320 12-121 (138)
422 3g0o_A 3-hydroxyisobutyrate de 35.1 1E+02 0.0034 27.5 7.5 114 183-320 8-125 (303)
423 3grk_A Enoyl-(acyl-carrier-pro 34.2 2E+02 0.0068 25.3 9.4 104 181-293 30-168 (293)
424 3ew7_A LMO0794 protein; Q8Y8U8 33.3 93 0.0032 25.5 6.6 99 184-293 2-101 (221)
425 2ew2_A 2-dehydropantoate 2-red 32.8 1.3E+02 0.0044 26.4 7.8 32 254-291 74-105 (316)
426 3ijr_A Oxidoreductase, short c 32.7 2.5E+02 0.0086 24.5 10.1 108 181-293 46-181 (291)
427 3slk_A Polyketide synthase ext 31.4 11 0.00036 39.5 0.2 95 177-293 341-441 (795)
428 3c24_A Putative oxidoreductase 31.1 1.3E+02 0.0044 26.4 7.5 86 183-292 12-98 (286)
429 3qha_A Putative oxidoreductase 30.4 62 0.0021 28.9 5.2 112 183-320 16-128 (296)
430 4gwg_A 6-phosphogluconate dehy 30.2 1.2E+02 0.0041 29.5 7.5 59 254-321 68-127 (484)
431 1gu7_A Enoyl-[acyl-carrier-pro 29.4 1E+02 0.0035 28.0 6.7 99 177-293 162-274 (364)
432 3swr_A DNA (cytosine-5)-methyl 27.8 3.1E+02 0.011 29.3 10.7 129 182-320 540-698 (1002)
433 3llv_A Exopolyphosphatase-rela 27.8 40 0.0014 26.1 3.0 33 182-216 6-40 (141)
434 3mag_A VP39; methylated adenin 26.9 79 0.0027 28.9 5.1 35 179-213 58-96 (307)
435 3ioy_A Short-chain dehydrogena 26.8 2.3E+02 0.0078 25.2 8.5 37 181-218 7-45 (319)
436 3hwr_A 2-dehydropantoate 2-red 26.4 1.9E+02 0.0066 25.8 7.9 34 253-292 85-118 (318)
437 3trk_A Nonstructural polyprote 26.1 29 0.00099 31.5 2.0 40 253-293 210-258 (324)
438 3pi7_A NADH oxidoreductase; gr 25.8 29 0.00099 31.8 2.1 30 254-293 233-262 (349)
439 4dio_A NAD(P) transhydrogenase 24.9 74 0.0025 30.3 4.8 16 79-94 38-53 (405)
440 3dmg_A Probable ribosomal RNA 24.8 1.2E+02 0.0042 28.2 6.4 120 169-316 34-158 (381)
441 3me5_A Cytosine-specific methy 24.5 4.8E+02 0.017 25.2 11.5 20 182-201 88-107 (482)
442 3v2g_A 3-oxoacyl-[acyl-carrier 24.2 3.4E+02 0.012 23.3 9.9 108 181-293 30-164 (271)
443 2l9u_A Receptor tyrosine-prote 23.9 64 0.0022 19.6 2.6 19 19-37 7-25 (40)
444 3b1f_A Putative prephenate deh 23.8 2.6E+02 0.009 24.2 8.2 33 253-291 65-98 (290)
445 3r3s_A Oxidoreductase; structu 23.7 3.6E+02 0.012 23.4 9.4 105 181-293 48-184 (294)
446 3jtm_A Formate dehydrogenase, 23.7 43 0.0015 31.2 2.8 125 181-328 163-287 (351)
447 2rir_A Dipicolinate synthase, 22.9 1.9E+02 0.0066 25.6 7.1 89 181-292 156-244 (300)
448 3is3_A 17BETA-hydroxysteroid d 22.9 3.2E+02 0.011 23.3 8.5 109 181-294 17-152 (270)
449 4f6c_A AUSA reductase domain p 22.7 1.7E+02 0.0058 27.1 7.0 33 181-214 68-100 (427)
450 2ww9_C Protein transport prote 22.6 50 0.0017 24.5 2.4 21 18-38 61-81 (87)
451 2h78_A Hibadh, 3-hydroxyisobut 22.5 1.9E+02 0.0065 25.4 7.0 113 183-320 4-120 (302)
452 3ic5_A Putative saccharopine d 22.3 89 0.003 22.7 4.0 34 182-217 5-39 (118)
453 1h2b_A Alcohol dehydrogenase; 22.0 1E+02 0.0036 28.1 5.2 99 177-293 182-284 (359)
454 4gua_A Non-structural polyprot 21.6 58 0.002 32.7 3.3 44 249-293 216-268 (670)
455 3gg2_A Sugar dehydrogenase, UD 21.3 1.8E+02 0.0063 27.7 7.0 37 183-221 3-39 (450)
456 4gbj_A 6-phosphogluconate dehy 21.2 1.4E+02 0.0049 26.6 5.8 114 184-322 7-122 (297)
457 1bg6_A N-(1-D-carboxylethyl)-L 20.8 1.9E+02 0.0065 25.9 6.7 33 254-292 75-107 (359)
458 3p2y_A Alanine dehydrogenase/p 20.7 26 0.0009 33.2 0.7 16 79-94 35-50 (381)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.78 E-value=8.1e-19 Score=162.21 Aligned_cols=140 Identities=14% Similarity=0.169 Sum_probs=106.7
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.++++.+|||||||+|..+..+++.+...++.++++|.++.|.+.++++........++.++.++ +.+++ .+.||+
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D---~~~~~-~~~~d~ 142 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD---IRDIA-IENASM 142 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC---TTTCC-CCSEEE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecc---ccccc-cccccc
Confidence 47889999999999999999999987666667777777778877776654432233467777764 44343 347999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc----------------c---------------------cc
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK----------------F---------------------CS 300 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~----------------~---------------------~~ 300 (343)
|+++.++||+++.+...+|++++++||| ||+|++..... + ..
T Consensus 143 v~~~~~l~~~~~~~~~~~l~~i~~~Lkp-GG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~ 221 (261)
T 4gek_A 143 VVLNFTLQFLEPSERQALLDKIYQGLNP-GGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVML 221 (261)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCC
T ss_pred ceeeeeeeecCchhHhHHHHHHHHHcCC-CcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhccccc
Confidence 9999999999988877899999999999 99999873110 0 11
Q ss_pred CCCHHHHHHHHHhcCCcEEEee
Q 019282 301 RLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 301 ~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
.++.+++.++|+++||+.++..
T Consensus 222 ~~s~~~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 222 TDSVETHKARLHKAGFEHSELW 243 (261)
T ss_dssp CBCHHHHHHHHHHHTCSEEEEE
T ss_pred CCCHHHHHHHHHHcCCCeEEEE
Confidence 2346788899999999988653
No 2
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.74 E-value=4.2e-17 Score=148.57 Aligned_cols=164 Identities=18% Similarity=0.185 Sum_probs=118.1
Q ss_pred cchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc
Q 019282 164 AGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED 243 (343)
Q Consensus 164 ~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~ 243 (343)
..+....+.+.+.+.+.++.+|||||||+|.++..+++.+ ... ++++|.++.+.+.+++..... .++.++.++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~--v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~ 111 (266)
T 3ujc_A 38 SGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAH--THGIDICSNIVNMANERVSGN---NKIIFEANDI 111 (266)
T ss_dssp TTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCE--EEEEESCHHHHHHHHHTCCSC---TTEEEEECCT
T ss_pred cchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCE--EEEEeCCHHHHHHHHHHhhcC---CCeEEEECcc
Confidence 3456677778777888899999999999999999999865 234 555555555555555543322 3666676644
Q ss_pred CCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----c------------ccCCCHHH
Q 019282 244 MDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----F------------CSRLGGEE 306 (343)
Q Consensus 244 ~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----~------------~~~~~~~~ 306 (343)
.+++ + .+++||+|++..+++|++......+|++++++||| ||.+++..... + ...++.++
T Consensus 112 ~~~~-~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (266)
T 3ujc_A 112 LTKE-F-PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKP-TGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEE 188 (266)
T ss_dssp TTCC-C-CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHH
T ss_pred ccCC-C-CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCC-CCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHH
Confidence 4432 2 36799999999999999766667799999999999 99999874211 0 12345899
Q ss_pred HHHHHHhcCCcEEEeeeccccccchhHHhh
Q 019282 307 CTKRLTSLGLEYIGKKTHDSLLFNHYEIWF 336 (343)
Q Consensus 307 l~~~L~~aGf~~v~~~~~~~l~~~~~e~w~ 336 (343)
+.+.++++||+++.......-....+..|.
T Consensus 189 ~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~ 218 (266)
T 3ujc_A 189 YADILTACNFKNVVSKDLSDYWNQLLEVEH 218 (266)
T ss_dssp HHHHHHHTTCEEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEEeCCHHHHHHHHHHH
Confidence 999999999999987765544444444554
No 3
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.74 E-value=5.2e-17 Score=149.21 Aligned_cols=164 Identities=18% Similarity=0.230 Sum_probs=118.2
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEeccc
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGED 243 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~ 243 (343)
..+.+.+.+.+.+.+.++.+|||||||+|.++..+++..+ ..++++| .++.+.+.+++... .+. ..++.++.++.
T Consensus 45 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD--~s~~~~~~a~~~~~~~~~-~~~~~~~~~d~ 120 (273)
T 3bus_A 45 ATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARD-VRVTGIS--ISRPQVNQANARATAAGL-ANRVTFSYADA 120 (273)
T ss_dssp HHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSC-CEEEEEE--SCHHHHHHHHHHHHHTTC-TTTEEEEECCT
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC-CEEEEEe--CCHHHHHHHHHHHHhcCC-CcceEEEECcc
Confidence 3566778888888889999999999999999999998652 4444554 44455554444333 333 23566776644
Q ss_pred CCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc---c-----------------cccCCC
Q 019282 244 MDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI---K-----------------FCSRLG 303 (343)
Q Consensus 244 ~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~---~-----------------~~~~~~ 303 (343)
.+++ + .+++||+|++..+++|+++... +|++++++||| ||++++.... . ....++
T Consensus 121 ~~~~-~-~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~L~p-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (273)
T 3bus_A 121 MDLP-F-EDASFDAVWALESLHHMPDRGR--ALREMARVLRP-GGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGG 195 (273)
T ss_dssp TSCC-S-CTTCEEEEEEESCTTTSSCHHH--HHHHHHTTEEE-EEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCC
T ss_pred ccCC-C-CCCCccEEEEechhhhCCCHHH--HHHHHHHHcCC-CeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCC
Confidence 4433 2 3578999999999999988755 99999999999 9999887311 0 112234
Q ss_pred HHHHHHHHHhcCCcEEEeeeccccccchhHHhhh
Q 019282 304 GEECTKRLTSLGLEYIGKKTHDSLLFNHYEIWFE 337 (343)
Q Consensus 304 ~~~l~~~L~~aGf~~v~~~~~~~l~~~~~e~w~~ 337 (343)
.+++.++++++||+++.......-....+..|..
T Consensus 196 ~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~ 229 (273)
T 3bus_A 196 IDEYESDVRQAELVVTSTVDISAQARPSLVKTAE 229 (273)
T ss_dssp HHHHHHHHHHTTCEEEEEEECHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEEECcHhHHHHHHHHHH
Confidence 8999999999999999877665544556666664
No 4
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.73 E-value=4.1e-17 Score=148.33 Aligned_cols=157 Identities=15% Similarity=0.157 Sum_probs=112.6
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEeccc
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGED 243 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~ 243 (343)
......+.+.+.+.++++.+|||||||+|.++..+++.++ .. ++++|.++.+.+.+++... .+. ..++.+..++.
T Consensus 20 ~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~-~~--v~gvD~s~~~l~~a~~~~~~~~~-~~~v~~~~~d~ 95 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHG-IT--GTGIDMSSLFTAQAKRRAEELGV-SERVHFIHNDA 95 (256)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTC-CE--EEEEESCHHHHHHHHHHHHHTTC-TTTEEEEESCC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcC-Ce--EEEEeCCHHHHHHHHHHHHhcCC-CcceEEEECCh
Confidence 3456677777788899999999999999999999998752 34 4555555555555554433 333 23567777644
Q ss_pred CCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------------cccCCCHHH
Q 019282 244 MDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------------FCSRLGGEE 306 (343)
Q Consensus 244 ~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------------~~~~~~~~~ 306 (343)
.+++ .+++||+|++..+++|+++... +|++++++||| ||++++....- ....++.++
T Consensus 96 ~~~~---~~~~fD~V~~~~~~~~~~~~~~--~l~~~~r~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (256)
T 1nkv_A 96 AGYV---ANEKCDVAACVGATWIAGGFAG--AEELLAQSLKP-GGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPG 169 (256)
T ss_dssp TTCC---CSSCEEEEEEESCGGGTSSSHH--HHHHHTTSEEE-EEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHH
T ss_pred HhCC---cCCCCCEEEECCChHhcCCHHH--HHHHHHHHcCC-CeEEEEecCcccCCCChHHHHHHHhcccccccCCHHH
Confidence 4443 3678999999999999987655 99999999999 99999874210 012334789
Q ss_pred HHHHHHhcCCcEEEeeeccccccch
Q 019282 307 CTKRLTSLGLEYIGKKTHDSLLFNH 331 (343)
Q Consensus 307 l~~~L~~aGf~~v~~~~~~~l~~~~ 331 (343)
+.++++++||+++.....+.-.|..
T Consensus 170 ~~~~l~~aGf~~~~~~~~~~~~~~~ 194 (256)
T 1nkv_A 170 LVGAFDDLGYDVVEMVLADQEGWDR 194 (256)
T ss_dssp HHHHHHTTTBCCCEEEECCHHHHHH
T ss_pred HHHHHHHCCCeeEEEEeCCHHHHHH
Confidence 9999999999988766544433433
No 5
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.73 E-value=7.2e-17 Score=149.63 Aligned_cols=151 Identities=11% Similarity=0.078 Sum_probs=108.3
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d 245 (343)
++.+++.+.+.+.++++.+|||||||+|.++..+++..+. . ++++|.++.+.+.+++.........++.+..+ |
T Consensus 49 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~--v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~---d 122 (287)
T 1kpg_A 49 QIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-N--VVGLTLSKNQANHVQQLVANSENLRSKRVLLA---G 122 (287)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-E--EEEEESCHHHHHHHHHHHHTCCCCSCEEEEES---C
T ss_pred HHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-E--EEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC---C
Confidence 4567777888788889999999999999999999966543 4 45555555555555544332222235666655 4
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc---------------------------
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF--------------------------- 298 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~--------------------------- 298 (343)
+.+++ ++||+|++..+++|+++.....+|++++++||| ||++++......
T Consensus 123 ~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (287)
T 1kpg_A 123 WEQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPA-DGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEI 199 (287)
T ss_dssp GGGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCT-TCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHT
T ss_pred hhhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCC-CCEEEEEEecCCCccccccccccccccccchhhhHHhee
Confidence 44343 789999999999999765556699999999999 999998631100
Q ss_pred ---ccCCCHHHHHHHHHhcCCcEEEeeecc
Q 019282 299 ---CSRLGGEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 299 ---~~~~~~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
...++.+++.+.++++||+++......
T Consensus 200 ~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 229 (287)
T 1kpg_A 200 FPGGRLPSIPMVQECASANGFTVTRVQSLQ 229 (287)
T ss_dssp STTCCCCCHHHHHHHHHTTTCEEEEEEECH
T ss_pred CCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 011248899999999999999877543
No 6
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.72 E-value=1.9e-16 Score=148.24 Aligned_cols=162 Identities=15% Similarity=0.131 Sum_probs=114.9
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
+...++.+.+.+.++++.+|||||||+|.++..+++.++ ..++++| .++.+.+.++++.. .+. ..++.+..+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD--~s~~~~~~a~~~~~~~~~-~~~v~~~~~--- 129 (302)
T 3hem_A 57 QYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLT--LSENQYAHDKAMFDEVDS-PRRKEVRIQ--- 129 (302)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEE--CCHHHHHHHHHHHHHSCC-SSCEEEEEC---
T ss_pred HHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEE--CCHHHHHHHHHHHHhcCC-CCceEEEEC---
Confidence 456777888888899999999999999999999998765 4444554 45555555554433 333 225666665
Q ss_pred CcCCCCCCCceeEEEEccccccCCc-------hHHHHHHHHHHhccCCCCcEEEEEecc---------------------
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPD-------KLVWVGLERLASKLRPYDGRIFVSHNI--------------------- 296 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~-------~~~~~~L~~l~r~LkP~GG~lvi~~~~--------------------- 296 (343)
|+.++ +++||+|++..+++|+++ .....+++++.++||| ||++++....
T Consensus 130 d~~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 3hem_A 130 GWEEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPD-DGRMLLHTITIPDKEEAQELGLTSPMSLLRF 206 (302)
T ss_dssp CGGGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCT-TCEEEEEEEECCCHHHHHHHTCCCCHHHHHH
T ss_pred CHHHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCC-CcEEEEEEEeccCccchhhccccccccccch
Confidence 44433 579999999999999955 4556699999999999 9999987311
Q ss_pred -ccc--------cCCCHHHHHHHHHhcCCcEEEeeeccccccchhHHhhh
Q 019282 297 -KFC--------SRLGGEECTKRLTSLGLEYIGKKTHDSLLFNHYEIWFE 337 (343)
Q Consensus 297 -~~~--------~~~~~~~l~~~L~~aGf~~v~~~~~~~l~~~~~e~w~~ 337 (343)
++. .....+++.+.++++||+++.......-.....+.|..
T Consensus 207 ~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y~~tl~~w~~ 256 (302)
T 3hem_A 207 IKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIGANYVPTLNAWAD 256 (302)
T ss_dssp HHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEECGGGHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeCchhHHHHHHHHHH
Confidence 111 11238899999999999998877654433333445544
No 7
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.71 E-value=6.3e-17 Score=147.91 Aligned_cols=156 Identities=15% Similarity=0.225 Sum_probs=108.4
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~ 248 (343)
++.+.+.+.+.++.+|||||||+|.++..+++... .++++|.++.+.+.+++... .+. . ++.++.++..+++
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~----~v~gvD~s~~~l~~a~~~~~~~~~-~-~v~~~~~d~~~l~- 98 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK----KVVAFDLTEDILKVARAFIEGNGH-Q-QVEYVQGDAEQMP- 98 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS----EEEEEESCHHHHHHHHHHHHHTTC-C-SEEEEECCC-CCC-
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC----EEEEEeCCHHHHHHHHHHHHhcCC-C-ceEEEEecHHhCC-
Confidence 34455556778889999999999999999988542 45555555555555554332 232 2 4666666444433
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc--------------------cccCCCHHHHH
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK--------------------FCSRLGGEECT 308 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~--------------------~~~~~~~~~l~ 308 (343)
+ .+++||+|++..+++|+++... +|++++++||| ||++++..... ....+..+++.
T Consensus 99 ~-~~~~fD~V~~~~~l~~~~d~~~--~l~~~~r~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (260)
T 1vl5_A 99 F-TDERFHIVTCRIAAHHFPNPAS--FVSEAYRVLKK-GGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWL 174 (260)
T ss_dssp S-CTTCEEEEEEESCGGGCSCHHH--HHHHHHHHEEE-EEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHH
T ss_pred C-CCCCEEEEEEhhhhHhcCCHHH--HHHHHHHHcCC-CCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHH
Confidence 2 3579999999999999998765 99999999999 99998863110 12234488999
Q ss_pred HHHHhcCCcEEEeeeccccccchhHHhhhh
Q 019282 309 KRLTSLGLEYIGKKTHDSLLFNHYEIWFEF 338 (343)
Q Consensus 309 ~~L~~aGf~~v~~~~~~~l~~~~~e~w~~~ 338 (343)
++|+++||+++....... ...|..|+..
T Consensus 175 ~~l~~aGf~~~~~~~~~~--~~~~~~~~~~ 202 (260)
T 1vl5_A 175 KMLEEAGFELEELHCFHK--TFIFEDWCDR 202 (260)
T ss_dssp HHHHHHTCEEEEEEEEEE--EEEHHHHHHH
T ss_pred HHHHHCCCeEEEEEEeec--cCCHHHHHHh
Confidence 999999999887665432 1235666654
No 8
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.70 E-value=3.4e-16 Score=147.45 Aligned_cols=149 Identities=13% Similarity=0.117 Sum_probs=108.2
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
++..++.+.+.+.+.++.+|||||||+|.++..+++.++ . .++++|.++.+.+.+++... .+. ..++.+..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~--~v~gvD~s~~~~~~a~~~~~~~~~-~~~v~~~~~--- 147 (318)
T 2fk8_A 75 QYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFD-V--NVIGLTLSKNQHARCEQVLASIDT-NRSRQVLLQ--- 147 (318)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHC-C--EEEEEESCHHHHHHHHHHHHTSCC-SSCEEEEES---
T ss_pred HHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCC-C--EEEEEECCHHHHHHHHHHHHhcCC-CCceEEEEC---
Confidence 456777888878888999999999999999999998653 3 45555555555555554433 233 235666655
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc----------------------c----
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK----------------------F---- 298 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~----------------------~---- 298 (343)
|+.+++ ++||+|++..+++|++++....+++++.++||| ||++++..... +
T Consensus 148 d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (318)
T 2fk8_A 148 GWEDFA--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPA-DGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTE 224 (318)
T ss_dssp CGGGCC--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCT-TCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ChHHCC--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCC-CcEEEEEEeccCCchhhhhccccccccccchhhHHHHh
Confidence 444332 689999999999999766666799999999999 99999863110 0
Q ss_pred ----ccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 299 ----CSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 299 ----~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
....+.+++.+.++++||+++.....
T Consensus 225 ~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 225 IFPGGRLPSTEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp TSTTCCCCCHHHHHHHHHHTTCBCCCCEEC
T ss_pred cCCCCcCCCHHHHHHHHHhCCCEEEEEEec
Confidence 01124889999999999998876654
No 9
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.70 E-value=1.5e-16 Score=143.08 Aligned_cols=132 Identities=16% Similarity=0.140 Sum_probs=95.9
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
..++.+|||||||+|.++..+++..+ .++++|+ ++.+.+.+++... . ++.++.++..++ ..+++||+|
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~--s~~~~~~a~~~~~----~-~v~~~~~d~~~~---~~~~~fD~v 107 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHFN--DITCVEA--SEEAISHAQGRLK----D-GITYIHSRFEDA---QLPRRYDNI 107 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTCS--CEEEEES--CHHHHHHHHHHSC----S-CEEEEESCGGGC---CCSSCEEEE
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeC--CHHHHHHHHHhhh----C-CeEEEEccHHHc---CcCCcccEE
Confidence 34677999999999999999987532 4445554 4555555544321 1 456666543333 346789999
Q ss_pred EEccccccCCchHHHHHHHHHH-hccCCCCcEEEEEeccc----------------------------cccCCCHHHHHH
Q 019282 259 YASAVFLHMPDKLVWVGLERLA-SKLRPYDGRIFVSHNIK----------------------------FCSRLGGEECTK 309 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~-r~LkP~GG~lvi~~~~~----------------------------~~~~~~~~~l~~ 309 (343)
++..+++|++++.. +|++++ ++||| ||++++..... +...++.+++.+
T Consensus 108 ~~~~~l~~~~~~~~--~l~~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (250)
T 2p7i_A 108 VLTHVLEHIDDPVA--LLKRINDDWLAE-GGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLER 184 (250)
T ss_dssp EEESCGGGCSSHHH--HHHHHHHTTEEE-EEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHH
T ss_pred EEhhHHHhhcCHHH--HHHHHHHHhcCC-CCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHH
Confidence 99999999998765 999999 99999 99999874211 112345899999
Q ss_pred HHHhcCCcEEEeeecc
Q 019282 310 RLTSLGLEYIGKKTHD 325 (343)
Q Consensus 310 ~L~~aGf~~v~~~~~~ 325 (343)
+++++||+++......
T Consensus 185 ~l~~~Gf~~~~~~~~~ 200 (250)
T 2p7i_A 185 DASRAGLQVTYRSGIF 200 (250)
T ss_dssp HHHHTTCEEEEEEEEE
T ss_pred HHHHCCCeEEEEeeeE
Confidence 9999999999876543
No 10
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.70 E-value=7.1e-16 Score=138.40 Aligned_cols=146 Identities=14% Similarity=0.173 Sum_probs=104.1
Q ss_pred HHHHHHHhcC-CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 169 VFEFLAEASH-ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 169 ~~~~l~~~~~-l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
..+.+...+. ..++.+|||||||+|.++..+++..+...++++|+++..... +++..... . ++.++.++ +.
T Consensus 31 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~--a~~~~~~~--~-~~~~~~~d---~~ 102 (234)
T 3dtn_A 31 FYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEI--AKNRFRGN--L-KVKYIEAD---YS 102 (234)
T ss_dssp HHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHH--HHHHTCSC--T-TEEEEESC---TT
T ss_pred HHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHH--HHHhhccC--C-CEEEEeCc---hh
Confidence 3444554444 567789999999999999999998765666666665544444 44332211 1 56666664 33
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc------------------------------
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK------------------------------ 297 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~------------------------------ 297 (343)
+.+..++||+|++..+++|++++....++++++++||| ||++++.....
T Consensus 103 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (234)
T 3dtn_A 103 KYDFEEKYDMVVSALSIHHLEDEDKKELYKRSYSILKE-SGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAA 181 (234)
T ss_dssp TCCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHT
T ss_pred ccCCCCCceEEEEeCccccCCHHHHHHHHHHHHHhcCC-CcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHH
Confidence 33334799999999999999888777799999999999 99999873110
Q ss_pred ------cccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 298 ------FCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 298 ------~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
....++.+++.++|+++||+.++...
T Consensus 182 ~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 213 (234)
T 3dtn_A 182 GYERSKLDKDIEMNQQLNWLKEAGFRDVSCIY 213 (234)
T ss_dssp TC----CCCCCBHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhcccccccCHHHHHHHHHHcCCCceeeee
Confidence 01123478889999999999987653
No 11
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.69 E-value=9.9e-17 Score=141.92 Aligned_cols=149 Identities=17% Similarity=0.236 Sum_probs=104.7
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.++++.+|||||||+|.++..+++. +..++++|.++.+...+++.. .+.+..+ ++...+.+++||+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~---d~~~~~~~~~fD~ 105 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA----GFDVDATDGSPELAAEASRRL-------GRPVRTM---LFHQLDAIDAYDA 105 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHH-------TSCCEEC---CGGGCCCCSCEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc----CCeEEEECCCHHHHHHHHHhc-------CCceEEe---eeccCCCCCcEEE
Confidence 4667889999999999999999884 334555555555555554432 1222333 3333335789999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc----------cccCCCHHHHHHHHHhcC-CcEEEeeeccc
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK----------FCSRLGGEECTKRLTSLG-LEYIGKKTHDS 326 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~----------~~~~~~~~~l~~~L~~aG-f~~v~~~~~~~ 326 (343)
|++..+++|++......+|++++++||| ||++++..... ....++.+++.++++++| |+++.......
T Consensus 106 v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~ 184 (211)
T 3e23_A 106 VWAHACLLHVPRDELADVLKLIWRALKP-GGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEG 184 (211)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred EEecCchhhcCHHHHHHHHHHHHHhcCC-CcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccC
Confidence 9999999999976767799999999999 99999874211 122346999999999999 99998775443
Q ss_pred ccc-chhHHhhhhhcc
Q 019282 327 LLF-NHYEIWFEFRRS 341 (343)
Q Consensus 327 l~~-~~~e~w~~~~~~ 341 (343)
..+ ...+.|+.+.+.
T Consensus 185 ~~~~~~~~~wl~~~~~ 200 (211)
T 3e23_A 185 KGFDQELAQFLHVSVR 200 (211)
T ss_dssp ECTTSCEEEEEEEEEE
T ss_pred CCCCCCCceEEEEEEe
Confidence 322 334567665543
No 12
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.69 E-value=2.6e-16 Score=146.60 Aligned_cols=151 Identities=19% Similarity=0.224 Sum_probs=108.3
Q ss_pred hHHHHHHHHHhc----CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEe
Q 019282 166 GRDVFEFLAEAS----HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVR 240 (343)
Q Consensus 166 ~~~~~~~l~~~~----~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~ 240 (343)
.++..+.+.+.+ .+.++.+|||||||+|.++..+++.++ .. ++++|.++.+.+.+++... .+. ..++.++.
T Consensus 63 ~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~--v~gvD~s~~~~~~a~~~~~~~~~-~~~~~~~~ 138 (297)
T 2o57_A 63 SLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG-VS--IDCLNIAPVQNKRNEEYNNQAGL-ADNITVKY 138 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CE--EEEEESCHHHHHHHHHHHHHHTC-TTTEEEEE
T ss_pred HHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC-CE--EEEEeCCHHHHHHHHHHHHhcCC-CcceEEEE
Confidence 455667777777 888999999999999999999998653 34 4445555555554444332 333 23566776
Q ss_pred cccCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------------cccCCC
Q 019282 241 GEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------------FCSRLG 303 (343)
Q Consensus 241 ~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------------~~~~~~ 303 (343)
++..+++ + .+++||+|++..+++|+++... +|++++++||| ||++++..... .....+
T Consensus 139 ~d~~~~~-~-~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (297)
T 2o57_A 139 GSFLEIP-C-EDNSYDFIWSQDAFLHSPDKLK--VFQECARVLKP-RGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGS 213 (297)
T ss_dssp CCTTSCS-S-CTTCEEEEEEESCGGGCSCHHH--HHHHHHHHEEE-EEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCC
T ss_pred cCcccCC-C-CCCCEeEEEecchhhhcCCHHH--HHHHHHHHcCC-CeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCC
Confidence 6444433 2 3578999999999999998654 99999999999 99999873210 001124
Q ss_pred HHHHHHHHHhcCCcEEEeeecc
Q 019282 304 GEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 304 ~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
.+++.++++++||+++......
T Consensus 214 ~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 214 LGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp HHHHHHHHHHTTEEEEEEEECH
T ss_pred HHHHHHHHHHCCCeEEEEEECc
Confidence 8889999999999998876543
No 13
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.68 E-value=1.8e-16 Score=143.24 Aligned_cols=134 Identities=16% Similarity=0.131 Sum_probs=100.7
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC-CCCCCCceeE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT-KFGSGVVYDL 257 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~-~~~~~~~fDl 257 (343)
++++.+|||||||+|.++..+++. +..++++|.+..+.+.+++. +.++.++..++. .+ .+++||+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~-~~~~fD~ 104 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE----GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL-PDKYLDG 104 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH----TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS-CTTCBSE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC----CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc-CCCCeeE
Confidence 567789999999999999999885 33466667777777766542 344444333321 23 3679999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc--------------cccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK--------------FCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~--------------~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
|++..+++|++++....++++++++||| ||++++..... ....+..+++.++++++||+++....
T Consensus 105 i~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 105 VMISHFVEHLDPERLFELLSLCYSKMKY-SSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHHBCT-TCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred EEECCchhhCCcHHHHHHHHHHHHHcCC-CcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEE
Confidence 9999999999988667799999999999 99999874211 12334589999999999999998887
Q ss_pred cccc
Q 019282 324 HDSL 327 (343)
Q Consensus 324 ~~~l 327 (343)
..++
T Consensus 184 ~~~~ 187 (240)
T 3dli_A 184 FEEC 187 (240)
T ss_dssp ECCC
T ss_pred eccC
Confidence 6643
No 14
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.68 E-value=2e-16 Score=140.27 Aligned_cols=149 Identities=10% Similarity=0.088 Sum_probs=101.9
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCC-----------CCCCCcE
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQG-----------LLHKRPI 237 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~-----------~~~~~~~ 237 (343)
+.+.+ ..+.++++.+|||+|||+|..+..+++. ++.++++|.++.|.+.+++..... ....++.
T Consensus 11 l~~~~-~~l~~~~~~~vLD~GCG~G~~~~~la~~----g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 11 LQQYW-SSLNVVPGARVLVPLCGKSQDMSWLSGQ----GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp HHHHH-HHHCCCTTCEEEETTTCCSHHHHHHHHH----CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred HHHHH-HhcccCCCCEEEEeCCCCcHhHHHHHHC----CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 33443 3456778899999999999999999984 445666666666666665432210 0123566
Q ss_pred EEecccCCcCCCCCC-CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEE-EEecccc----c--cCCCHHHHHH
Q 019282 238 IVRGEDMDFTKFGSG-VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIF-VSHNIKF----C--SRLGGEECTK 309 (343)
Q Consensus 238 ~~~~~~~dl~~~~~~-~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lv-i~~~~~~----~--~~~~~~~l~~ 309 (343)
++.++..+++ + .+ ++||+|++..+++|++......++++++++||| ||+++ ++...+. . ..+..+++.+
T Consensus 86 ~~~~d~~~l~-~-~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp-gG~~~l~~~~~~~~~~~~~~~~~~~~el~~ 162 (203)
T 1pjz_A 86 IWCGDFFALT-A-RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQ-ACSGLLITLEYDQALLEGPPFSVPQTWLHR 162 (203)
T ss_dssp EEEECCSSST-H-HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS-EEEEEEEEESSCSSSSSSCCCCCCHHHHHH
T ss_pred EEECccccCC-c-ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCC-CcEEEEEEEecCccccCCCCCCCCHHHHHH
Confidence 7776444333 1 12 689999999999999887777799999999999 99843 4322110 0 1134899999
Q ss_pred HHHhcCCcEEEeeeccc
Q 019282 310 RLTSLGLEYIGKKTHDS 326 (343)
Q Consensus 310 ~L~~aGf~~v~~~~~~~ 326 (343)
.+++ ||+++.....+.
T Consensus 163 ~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 163 VMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp TSCS-SEEEEEEEESSC
T ss_pred HhcC-CcEEEEeccccc
Confidence 9988 999887665543
No 15
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.68 E-value=2.3e-16 Score=139.15 Aligned_cols=148 Identities=16% Similarity=0.192 Sum_probs=104.5
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
...+.+.+.+....+++ +|||||||+|.++..+++. +...++++|+ ++.+.+.+++... .+. ..++.++.++..
T Consensus 29 ~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~--s~~~~~~a~~~~~~~~~-~~~~~~~~~d~~ 103 (219)
T 3dlc_A 29 YPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDF--SKHMNEIALKNIADANL-NDRIQIVQGDVH 103 (219)
T ss_dssp HHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEES--CHHHHHHHHHHHHHTTC-TTTEEEEECBTT
T ss_pred cHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEEC--CHHHHHHHHHHHHhccc-cCceEEEEcCHH
Confidence 44566667766777777 9999999999999999986 3334445544 4455554444433 233 335677766544
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-------------------------cc
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-------------------------FC 299 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-------------------------~~ 299 (343)
+++ + .+++||+|++..+++|+++... ++++++++||| ||.+++..... ..
T Consensus 104 ~~~-~-~~~~~D~v~~~~~l~~~~~~~~--~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (219)
T 3dlc_A 104 NIP-I-EDNYADLIVSRGSVFFWEDVAT--AFREIYRILKS-GGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNI 178 (219)
T ss_dssp BCS-S-CTTCEEEEEEESCGGGCSCHHH--HHHHHHHHEEE-EEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHS
T ss_pred HCC-C-CcccccEEEECchHhhccCHHH--HHHHHHHhCCC-CCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhcc
Confidence 433 2 3579999999999999987665 99999999999 99999873110 01
Q ss_pred cCCCHHHHHHHHHhcCCcEEEeee
Q 019282 300 SRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 300 ~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
..++.+++.++|+++||+.+....
T Consensus 179 ~~~~~~~~~~~l~~aGf~~v~~~~ 202 (219)
T 3dlc_A 179 SQENVERFQNVLDEIGISSYEIIL 202 (219)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred ccCCHHHHHHHHHHcCCCeEEEEe
Confidence 112268999999999999887664
No 16
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.68 E-value=4.5e-16 Score=146.55 Aligned_cols=161 Identities=12% Similarity=0.060 Sum_probs=112.2
Q ss_pred hHHHHHHHHHhcC-CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEeccc
Q 019282 166 GRDVFEFLAEASH-ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGED 243 (343)
Q Consensus 166 ~~~~~~~l~~~~~-l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~ 243 (343)
.....+.+.+.+. +.++.+|||||||+|.++..+++.+. .. ++++|.++.+.+.++++.. .++ ..++.++.++.
T Consensus 101 ~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~--v~gvD~s~~~~~~a~~~~~~~~~-~~~v~~~~~d~ 176 (312)
T 3vc1_A 101 ESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG-SR--VEGVTLSAAQADFGNRRARELRI-DDHVRSRVCNM 176 (312)
T ss_dssp HHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC-CE--EEEEESCHHHHHHHHHHHHHTTC-TTTEEEEECCT
T ss_pred HHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC-CE--EEEEeCCHHHHHHHHHHHHHcCC-CCceEEEECCh
Confidence 3444566776676 88899999999999999999998652 34 5555555555555554433 333 33677777654
Q ss_pred CCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc------------------ccCCCHH
Q 019282 244 MDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF------------------CSRLGGE 305 (343)
Q Consensus 244 ~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~------------------~~~~~~~ 305 (343)
.+++ + .+++||+|++..+++|++ ...+|++++++||| ||++++...... ...+..+
T Consensus 177 ~~~~-~-~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 250 (312)
T 3vc1_A 177 LDTP-F-DKGAVTASWNNESTMYVD---LHDLFSEHSRFLKV-GGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRR 250 (312)
T ss_dssp TSCC-C-CTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEE-EEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHH
T ss_pred hcCC-C-CCCCEeEEEECCchhhCC---HHHHHHHHHHHcCC-CcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHH
Confidence 4443 2 357999999999999994 34599999999999 999988631100 1123488
Q ss_pred HHHHHHHhcCCcEEEeeeccccccchhHHhh
Q 019282 306 ECTKRLTSLGLEYIGKKTHDSLLFNHYEIWF 336 (343)
Q Consensus 306 ~l~~~L~~aGf~~v~~~~~~~l~~~~~e~w~ 336 (343)
++.++++++||+++..........+.|..++
T Consensus 251 ~~~~~l~~aGf~~~~~~~~~~~~~~~w~~~~ 281 (312)
T 3vc1_A 251 EYLRAMADNRLVPHTIVDLTPDTLPYWELRA 281 (312)
T ss_dssp HHHHHHHTTTEEEEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEEeCCHHHHHHHHHHH
Confidence 9999999999999988876544444444443
No 17
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.67 E-value=9.1e-16 Score=139.48 Aligned_cols=153 Identities=14% Similarity=0.173 Sum_probs=106.2
Q ss_pred HHHHHHHHHhc-CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 167 RDVFEFLAEAS-HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 167 ~~~~~~l~~~~-~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
......+...+ .++++.+|||||||+|.++..+++..+. .++++|+++ .+.+.++++.. .+. .+++.++.++..
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~--~~~~~a~~~~~~~~~-~~~~~~~~~d~~ 106 (257)
T 3f4k_A 31 PEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFP--DFIEIFNENAVKANC-ADRVKGITGSMD 106 (257)
T ss_dssp HHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCH--HHHHHHHHHHHHTTC-TTTEEEEECCTT
T ss_pred HHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCH--HHHHHHHHHHHHcCC-CCceEEEECChh
Confidence 34444454444 6788899999999999999999997653 555555555 44444444433 333 335777776544
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc---c-------------cccCCCHHHHH
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI---K-------------FCSRLGGEECT 308 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~---~-------------~~~~~~~~~l~ 308 (343)
+++ + .+++||+|++..+++|+ +.. .++++++++||| ||++++.... . +....+.+++.
T Consensus 107 ~~~-~-~~~~fD~v~~~~~l~~~-~~~--~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (257)
T 3f4k_A 107 NLP-F-QNEELDLIWSEGAIYNI-GFE--RGMNEWSKYLKK-GGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCI 180 (257)
T ss_dssp SCS-S-CTTCEEEEEEESCSCCC-CHH--HHHHHHHTTEEE-EEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHH
T ss_pred hCC-C-CCCCEEEEEecChHhhc-CHH--HHHHHHHHHcCC-CcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHH
Confidence 443 2 35799999999999999 443 489999999999 9999987421 0 01122478899
Q ss_pred HHHHhcCCcEEEeeecccccc
Q 019282 309 KRLTSLGLEYIGKKTHDSLLF 329 (343)
Q Consensus 309 ~~L~~aGf~~v~~~~~~~l~~ 329 (343)
+.++++||+++.......-.|
T Consensus 181 ~~l~~aGf~~v~~~~~~~~~w 201 (257)
T 3f4k_A 181 DKMERAGYTPTAHFILPENCW 201 (257)
T ss_dssp HHHHHTTEEEEEEEECCGGGT
T ss_pred HHHHHCCCeEEEEEECChhhH
Confidence 999999999998765544444
No 18
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.67 E-value=3.5e-16 Score=141.83 Aligned_cols=155 Identities=14% Similarity=0.080 Sum_probs=108.8
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
....+.+.+...++.+|||||||+|.++..+++.. ...++++|+++ .+.+.+++..... .++.++.++..+++
T Consensus 81 ~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~--~~~~~a~~~~~~~---~~~~~~~~d~~~~~- 153 (254)
T 1xtp_A 81 GSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVK--HMLEEAKRELAGM---PVGKFILASMETAT- 153 (254)
T ss_dssp HHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCH--HHHHHHHHHTTTS---SEEEEEESCGGGCC-
T ss_pred HHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCH--HHHHHHHHHhccC---CceEEEEccHHHCC-
Confidence 34455555667788999999999999999998865 23455555555 4444444432211 24556665433332
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------cccCCCHHHHHHHHHhcCCc
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------FCSRLGGEECTKRLTSLGLE 317 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------~~~~~~~~~l~~~L~~aGf~ 317 (343)
+ .+++||+|++..+++|+++.....+|++++++||| ||++++..... ....++.+++.++++++||+
T Consensus 154 ~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 231 (254)
T 1xtp_A 154 L-PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTP-NGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVR 231 (254)
T ss_dssp C-CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCC
T ss_pred C-CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCC-CeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCE
Confidence 2 35789999999999999876667799999999999 99999875211 11123489999999999999
Q ss_pred EEEeeeccccccchh
Q 019282 318 YIGKKTHDSLLFNHY 332 (343)
Q Consensus 318 ~v~~~~~~~l~~~~~ 332 (343)
++.......++...+
T Consensus 232 ~~~~~~~~~~~~~~~ 246 (254)
T 1xtp_A 232 VVKEAFQEEWPTDLF 246 (254)
T ss_dssp EEEEEECTTCCTTSC
T ss_pred EEEeeecCCCCchhh
Confidence 998877665554444
No 19
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.67 E-value=6.6e-16 Score=143.13 Aligned_cols=144 Identities=17% Similarity=0.098 Sum_probs=101.4
Q ss_pred HHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCC
Q 019282 172 FLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGS 251 (343)
Q Consensus 172 ~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~ 251 (343)
.+...+..+ +.+|||||||+|.++..+++. +..++++|.++.+.+.+++.........++.++.++..+++.+ .
T Consensus 60 ~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 133 (285)
T 4htf_A 60 RVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER----GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH-L 133 (285)
T ss_dssp HHHHHTCSS-CCEEEEETCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-C
T ss_pred HHHHhcCCC-CCEEEEeCCcchHHHHHHHHC----CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-c
Confidence 344444433 679999999999999999984 3345555555555555555433222223566776655544423 4
Q ss_pred CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------------------------cccCC
Q 019282 252 GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------------------------FCSRL 302 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------------------------~~~~~ 302 (343)
+++||+|++..+++|+++... +|++++++||| ||++++..... ....+
T Consensus 134 ~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVADPRS--VLQTLWSVLRP-GGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPR 210 (285)
T ss_dssp SSCEEEEEEESCGGGCSCHHH--HHHHHHHTEEE-EEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCB
T ss_pred CCCceEEEECchhhcccCHHH--HHHHHHHHcCC-CeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCC
Confidence 679999999999999988765 99999999999 99999873110 01223
Q ss_pred CHHHHHHHHHhcCCcEEEeeec
Q 019282 303 GGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 303 ~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
+++++.++|+++||+++.....
T Consensus 211 ~~~~l~~~l~~aGf~v~~~~~~ 232 (285)
T 4htf_A 211 DPTQVYLWLEEAGWQIMGKTGV 232 (285)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHCCCceeeeeeE
Confidence 4899999999999999976653
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.67 E-value=1e-15 Score=135.87 Aligned_cols=134 Identities=18% Similarity=0.154 Sum_probs=98.9
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
...++.+|||||||+|.++..+++. +..++++|.++.+.+.+++... .++.++.++..+++ ..++||+
T Consensus 42 ~~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~---~~~~fD~ 109 (220)
T 3hnr_A 42 VNKSFGNVLEFGVGTGNLTNKLLLA----GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFE---VPTSIDT 109 (220)
T ss_dssp HHTCCSEEEEECCTTSHHHHHHHHT----TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCC---CCSCCSE
T ss_pred hccCCCeEEEeCCCCCHHHHHHHhC----CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcC---CCCCeEE
Confidence 3447889999999999999999884 4456666666666666654322 24556655433333 3379999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------------c---------ccCCCHHHHHHHH
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------------F---------CSRLGGEECTKRL 311 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------------~---------~~~~~~~~l~~~L 311 (343)
|++..+++|++++....+|++++++||| ||.+++..... + ...++.+++.+++
T Consensus 110 v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 188 (220)
T 3hnr_A 110 IVSTYAFHHLTDDEKNVAIAKYSQLLNK-GGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIF 188 (220)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCT-TCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHH
T ss_pred EEECcchhcCChHHHHHHHHHHHHhcCC-CCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHH
Confidence 9999999999998777799999999999 99999873110 0 0112478999999
Q ss_pred HhcCCcEEEeeec
Q 019282 312 TSLGLEYIGKKTH 324 (343)
Q Consensus 312 ~~aGf~~v~~~~~ 324 (343)
+++||+++.....
T Consensus 189 ~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 189 ENNGFHVTFTRLN 201 (220)
T ss_dssp HHTTEEEEEEECS
T ss_pred HHCCCEEEEeecc
Confidence 9999998876653
No 21
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=2.3e-15 Score=136.82 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=102.7
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
.....+.+.+.+.++.+|||||||+|.++..+++.++...++++|+++.....+ ++. ..++.+..++..+++
T Consensus 20 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a--~~~------~~~~~~~~~d~~~~~ 91 (259)
T 2p35_A 20 RPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKA--ADR------LPNTNFGKADLATWK 91 (259)
T ss_dssp HHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHH--HHH------STTSEEEECCTTTCC
T ss_pred HHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHH--HHh------CCCcEEEECChhhcC
Confidence 344556666677888999999999999999999987666777777666554444 332 124566665444433
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------------c-----------c
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------------F-----------C 299 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------------~-----------~ 299 (343)
.+++||+|++..+++|+++... +|++++++||| ||++++..... + .
T Consensus 92 ---~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (259)
T 2p35_A 92 ---PAQKADLLYANAVFQWVPDHLA--VLSQLMDQLES-GGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRK 165 (259)
T ss_dssp ---CSSCEEEEEEESCGGGSTTHHH--HHHHHGGGEEE-EEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------C
T ss_pred ---ccCCcCEEEEeCchhhCCCHHH--HHHHHHHhcCC-CeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhcccccccc
Confidence 4678999999999999987655 99999999999 99999874211 0 1
Q ss_pred cCCCHHHHHHHHHhcCCcEEEee
Q 019282 300 SRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 300 ~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
..+..+++.++|+++||++....
T Consensus 166 ~~~~~~~~~~~l~~aGf~v~~~~ 188 (259)
T 2p35_A 166 PLPPPSDYFNALSPKSSRVDVWH 188 (259)
T ss_dssp CCCCHHHHHHHHGGGEEEEEEEE
T ss_pred CCCCHHHHHHHHHhcCCceEEEE
Confidence 12348999999999999754433
No 22
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.66 E-value=6.3e-16 Score=139.11 Aligned_cols=141 Identities=15% Similarity=0.141 Sum_probs=102.2
Q ss_pred hcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCce
Q 019282 176 ASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
...+++ .+|||||||+|.++..+++ .+..++++|.++.+.+.+++.........++.++.+ |+.++..+++|
T Consensus 62 ~~~~~~-~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~f 133 (235)
T 3lcc_A 62 TSSLPL-GRALVPGCGGGHDVVAMAS----PERFVVGLDISESALAKANETYGSSPKAEYFSFVKE---DVFTWRPTELF 133 (235)
T ss_dssp TTCSCC-EEEEEETCTTCHHHHHHCB----TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECC---CTTTCCCSSCE
T ss_pred hcCCCC-CCEEEeCCCCCHHHHHHHh----CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEEC---chhcCCCCCCe
Confidence 344544 4999999999999998876 456677777777777766654332111224566665 44444456699
Q ss_pred eEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc------ccCCCHHHHHHHHHhcCCcEEEeeecc
Q 019282 256 DLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF------CSRLGGEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~------~~~~~~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
|+|++..+++|+++.....++++++++||| ||++++...... ...+..+++.++++++||+++......
T Consensus 134 D~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 134 DLIFDYVFFCAIEPEMRPAWAKSMYELLKP-DGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp EEEEEESSTTTSCGGGHHHHHHHHHHHEEE-EEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECT
T ss_pred eEEEEChhhhcCCHHHHHHHHHHHHHHCCC-CcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecC
Confidence 999999999999966667799999999999 999988632111 112458999999999999998876543
No 23
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.66 E-value=1.1e-15 Score=140.39 Aligned_cols=152 Identities=16% Similarity=0.131 Sum_probs=104.7
Q ss_pred HHHHHHHHhcC-CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 168 DVFEFLAEASH-ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 168 ~~~~~l~~~~~-l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
.....+...+. ++++.+|||||||+|.++..+++. +...++++|+++ .+.+.+++... .+. .+++.++.++..+
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~--~~~~~a~~~~~~~~~-~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 32 EVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLS--GFIDIFNRNARQSGL-QNRVTGIVGSMDD 107 (267)
T ss_dssp HHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCH--HHHHHHHHHHHHTTC-TTTEEEEECCTTS
T ss_pred HHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCH--HHHHHHHHHHHHcCC-CcCcEEEEcChhh
Confidence 34444444444 778899999999999999999986 334555555554 55554454433 333 3357777764444
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc---c-------------cccCCCHHHHHH
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI---K-------------FCSRLGGEECTK 309 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~---~-------------~~~~~~~~~l~~ 309 (343)
++ + .+++||+|++..+++|+ +.. .++++++++||| ||++++.... . +....+.+++.+
T Consensus 108 ~~-~-~~~~fD~i~~~~~~~~~-~~~--~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (267)
T 3kkz_A 108 LP-F-RNEELDLIWSEGAIYNI-GFE--RGLNEWRKYLKK-GGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVA 181 (267)
T ss_dssp CC-C-CTTCEEEEEESSCGGGT-CHH--HHHHHHGGGEEE-EEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHH
T ss_pred CC-C-CCCCEEEEEEcCCceec-CHH--HHHHHHHHHcCC-CCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHH
Confidence 33 2 36799999999999999 443 489999999999 9999987421 0 011123788999
Q ss_pred HHHhcCCcEEEeeecccccc
Q 019282 310 RLTSLGLEYIGKKTHDSLLF 329 (343)
Q Consensus 310 ~L~~aGf~~v~~~~~~~l~~ 329 (343)
.++++||+++.......-.|
T Consensus 182 ~l~~aGf~~v~~~~~~~~~w 201 (267)
T 3kkz_A 182 KIHKAGYLPVATFILPENCW 201 (267)
T ss_dssp HHHHTTEEEEEEEECCGGGT
T ss_pred HHHHCCCEEEEEEECCHhHH
Confidence 99999999998776554444
No 24
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.66 E-value=1.5e-15 Score=135.15 Aligned_cols=153 Identities=14% Similarity=0.070 Sum_probs=103.5
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCC---CCcEEEe
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLH---KRPIIVR 240 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~---~~~~~~~ 240 (343)
.....++.+.+.+...++.+|||||||+|.++..+++..+...++++|+++.....+ ++... .++.. .++.++.
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a--~~~~~~~~~~~~~~~~v~~~~ 90 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERA--KDRLKIDRLPEMQRKRISLFQ 90 (219)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHH--HHHHTGGGSCHHHHTTEEEEE
T ss_pred chHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHH--HHHHHhhccccccCcceEEEe
Confidence 344455666555555678899999999999999999866545666666665554444 43322 22211 1456666
Q ss_pred cccCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccc-----------------cCCC
Q 019282 241 GEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFC-----------------SRLG 303 (343)
Q Consensus 241 ~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~-----------------~~~~ 303 (343)
++..... . .+++||+|++..+++|++++....++++++++||| ||.++.+....+. ..++
T Consensus 91 ~d~~~~~-~-~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (219)
T 3jwg_A 91 SSLVYRD-K-RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRP-QTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWT 167 (219)
T ss_dssp CCSSSCC-G-GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCC-SEEEEEEEBGGGGGCCCCT-----GGGCCTTSBC
T ss_pred Ccccccc-c-ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCC-CEEEEEccchhhhhhhcccCcccccccCceeeec
Confidence 5332221 1 35789999999999999988767799999999999 9977776433321 1124
Q ss_pred HHHHH----HHHHhcCCcEEEee
Q 019282 304 GEECT----KRLTSLGLEYIGKK 322 (343)
Q Consensus 304 ~~~l~----~~L~~aGf~~v~~~ 322 (343)
.+++. +.++++||++....
T Consensus 168 ~~~l~~~~~~l~~~~Gf~v~~~~ 190 (219)
T 3jwg_A 168 RKEFQTWAVKVAEKYGYSVRFLQ 190 (219)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCcEEEEEe
Confidence 77777 77889999876554
No 25
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.66 E-value=2.3e-15 Score=133.49 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=104.4
Q ss_pred HHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCC
Q 019282 172 FLAEASHITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 172 ~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~ 249 (343)
.+.+.+.+.++.+|||||||+|.++..+++.. +...++++|+++.....+ ++... .+.. ++.++.++..+++ +
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a--~~~~~~~~~~--~~~~~~~d~~~~~-~ 102 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYA--WEKVNKLGLK--NVEVLKSEENKIP-L 102 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHH--HHHHHHHTCT--TEEEEECBTTBCS-S
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHH--HHHHHHcCCC--cEEEEecccccCC-C
Confidence 34445578889999999999999999999876 444556666655544444 43322 2322 4666666444433 2
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc--------ccccCCCHHHHHHHHHhcCCcEEEe
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI--------KFCSRLGGEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~--------~~~~~~~~~~l~~~L~~aGf~~v~~ 321 (343)
.+++||+|++..+++|+++... ++++++++||| ||.+++.... .....+..+++.+.++++||+++..
T Consensus 103 -~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 103 -PDNTVDFIFMAFTFHELSEPLK--FLEELKRVAKP-FAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp -CSSCEEEEEEESCGGGCSSHHH--HHHHHHHHEEE-EEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred -CCCCeeEEEeehhhhhcCCHHH--HHHHHHHHhCC-CeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 3578999999999999987655 99999999999 9999987421 2233456899999999999998876
Q ss_pred eec
Q 019282 322 KTH 324 (343)
Q Consensus 322 ~~~ 324 (343)
...
T Consensus 179 ~~~ 181 (219)
T 3dh0_A 179 VEV 181 (219)
T ss_dssp EEE
T ss_pred Eee
Confidence 543
No 26
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.65 E-value=9.6e-16 Score=136.28 Aligned_cols=150 Identities=16% Similarity=0.085 Sum_probs=103.2
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCC---CCcEEEecc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLH---KRPIIVRGE 242 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~---~~~~~~~~~ 242 (343)
+..++.+.+.+...++.+|||||||+|.++..+++..+...++++|+++.....+ ++... .+... .++.++.++
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a--~~~~~~~~~~~~~~~~v~~~~~d 92 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIA--QERLDRLRLPRNQWERLQLIQGA 92 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHH--HHHHTTCCCCHHHHTTEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHH--HHHHHHhcCCcccCcceEEEeCC
Confidence 3455556555555678899999999999999999865545666666665554444 43322 22210 146666653
Q ss_pred cCCcCCCC-CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc-----------------ccCCCH
Q 019282 243 DMDFTKFG-SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF-----------------CSRLGG 304 (343)
Q Consensus 243 ~~dl~~~~-~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~-----------------~~~~~~ 304 (343)
+.... ..++||+|++..+++|++++....++++++++||| ||.++++....+ ...+++
T Consensus 93 ---~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (217)
T 3jwh_A 93 ---LTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQP-KIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTR 168 (217)
T ss_dssp ---TTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCC-SEEEEEEEBHHHHHHTC-----------CCSCBCH
T ss_pred ---cccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCC-CEEEEEccCcccchhhcccccccccccccccccCH
Confidence 32222 24689999999999999988777799999999999 998877643222 111357
Q ss_pred HHHH----HHHHhcCCcEEEee
Q 019282 305 EECT----KRLTSLGLEYIGKK 322 (343)
Q Consensus 305 ~~l~----~~L~~aGf~~v~~~ 322 (343)
+++. +.++++||+++...
T Consensus 169 ~~l~~~~~~~~~~~Gf~v~~~~ 190 (217)
T 3jwh_A 169 SQFQNWANKITERFAYNVQFQP 190 (217)
T ss_dssp HHHHHHHHHHHHHSSEEEEECC
T ss_pred HHHHHHHHHHHHHcCceEEEEe
Confidence 7777 78889999886653
No 27
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.65 E-value=1.4e-15 Score=137.56 Aligned_cols=156 Identities=16% Similarity=0.297 Sum_probs=108.1
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~ 248 (343)
...+.+.+.++++.+|||||||+|.++..+++.. ..++++|+ ++.+.+.+++... .+. .++.++.++..+++
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~--s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~- 82 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDA--TKEMVEVASSFAQEKGV--ENVRFQQGTAESLP- 82 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEES--CHHHHHHHHHHHHHHTC--CSEEEEECBTTBCC-
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEEC--CHHHHHHHHHHHHHcCC--CCeEEEecccccCC-
Confidence 3445556788999999999999999999998754 24445554 4455554444322 222 14566666444433
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc--------------------cccCCCHHHHH
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK--------------------FCSRLGGEECT 308 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~--------------------~~~~~~~~~l~ 308 (343)
+ .+++||+|++..+++|+++... +|++++++||| ||++++..... ....+..+++.
T Consensus 83 ~-~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T 1xxl_A 83 F-PDDSFDIITCRYAAHHFSDVRK--AVREVARVLKQ-DGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQ 158 (239)
T ss_dssp S-CTTCEEEEEEESCGGGCSCHHH--HHHHHHHHEEE-EEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHH
T ss_pred C-CCCcEEEEEECCchhhccCHHH--HHHHHHHHcCC-CcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHH
Confidence 2 3578999999999999988765 99999999999 99999863211 12234589999
Q ss_pred HHHHhcCCcEEEeeeccccccchhHHhhhh
Q 019282 309 KRLTSLGLEYIGKKTHDSLLFNHYEIWFEF 338 (343)
Q Consensus 309 ~~L~~aGf~~v~~~~~~~l~~~~~e~w~~~ 338 (343)
++|+++||+++....... .-.|..|+..
T Consensus 159 ~ll~~aGf~~~~~~~~~~--~~~~~~w~~~ 186 (239)
T 1xxl_A 159 AMFSANQLAYQDIQKWNL--PIQYDSWIKR 186 (239)
T ss_dssp HHHHHTTEEEEEEEEEEE--EEEHHHHHHH
T ss_pred HHHHHCCCcEEEEEeecC--ccCHHHHHHH
Confidence 999999999887665421 1235666644
No 28
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.65 E-value=1.7e-15 Score=137.71 Aligned_cols=143 Identities=10% Similarity=0.015 Sum_probs=101.2
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~ 249 (343)
...+.+.+...++.+|||||||+|.++..+++... ..++++|+ ++.+.+.+++... ..++.++.++..+++ +
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~--s~~~~~~a~~~~~----~~~~~~~~~d~~~~~-~ 104 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDL--SERMLTEAKRKTT----SPVVCYEQKAIEDIA-I 104 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEES--CHHHHHHHHHHCC----CTTEEEEECCGGGCC-C
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEEC--CHHHHHHHHHhhc----cCCeEEEEcchhhCC-C
Confidence 34455555666789999999999999999988532 24445554 4455554444322 235666766444433 2
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc-------------------------------
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF------------------------------- 298 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~------------------------------- 298 (343)
.+++||+|++..+++|+++... +|++++++||| ||.+++......
T Consensus 105 -~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (253)
T 3g5l_A 105 -EPDAYNVVLSSLALHYIASFDD--ICKKVYINLKS-SGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMR 180 (253)
T ss_dssp -CTTCEEEEEEESCGGGCSCHHH--HHHHHHHHEEE-EEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEE
T ss_pred -CCCCeEEEEEchhhhhhhhHHH--HHHHHHHHcCC-CcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceE
Confidence 3679999999999999987655 99999999999 999998621110
Q ss_pred ----------ccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 299 ----------CSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 299 ----------~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
...++.+++.++|+++||+++.....
T Consensus 181 ~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 181 TSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp EEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred EEeeccccCccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 00126899999999999999987754
No 29
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.65 E-value=1.5e-15 Score=133.33 Aligned_cols=132 Identities=15% Similarity=0.121 Sum_probs=98.6
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEc
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYAS 261 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~ 261 (343)
+.+|||||||+|.++..+++. +..++++|.++.+.+.+++.. .++.++.++..+++ + .+++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~-~-~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL----GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLS-D-SPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT----TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGG-G-SCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc----CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccc-c-CCCCeEEEEeh
Confidence 779999999999999999884 334566666666666555421 14566665444433 2 35799999999
Q ss_pred cccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------cccCCCHHHHHHHHHhcCCcEEEeeeccc
Q 019282 262 AVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------FCSRLGGEECTKRLTSLGLEYIGKKTHDS 326 (343)
Q Consensus 262 ~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------~~~~~~~~~l~~~L~~aGf~~v~~~~~~~ 326 (343)
.+++|++......+|++++++||| ||.+++..... ....++.+++.++++++||+++.......
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~p-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVED-GGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEE-EEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCC-CcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 999999865566699999999999 99999874211 11224589999999999999998887655
No 30
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.64 E-value=1.7e-15 Score=133.77 Aligned_cols=134 Identities=21% Similarity=0.168 Sum_probs=98.9
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.++++.+|||||||+|.++..+++. +..++++|.++.+.+.+++ .+. .++.++.++..++ ..+++||+
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~----~~~v~~~D~s~~~~~~a~~---~~~--~~~~~~~~d~~~~---~~~~~~D~ 110 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGL----ADRVTALDGSAEMIAEAGR---HGL--DNVEFRQQDLFDW---TPDRQWDA 110 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHH----SSEEEEEESCHHHHHHHGG---GCC--TTEEEEECCTTSC---CCSSCEEE
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhc----CCeEEEEeCCHHHHHHHHh---cCC--CCeEEEecccccC---CCCCceeE
Confidence 4777889999999999999999985 3345555555566665554 222 2566666644433 35689999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc---------------c--------------ccCCCHHHHH
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK---------------F--------------CSRLGGEECT 308 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~---------------~--------------~~~~~~~~l~ 308 (343)
|++..+++|++++....+|++++++||| ||.+++..... . ...++++++.
T Consensus 111 v~~~~~l~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (218)
T 3ou2_A 111 VFFAHWLAHVPDDRFEAFWESVRSAVAP-GGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELT 189 (218)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHH
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCC-CeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHH
Confidence 9999999999998667799999999999 99998873210 0 0123589999
Q ss_pred HHHHhcCCcEEEeeec
Q 019282 309 KRLTSLGLEYIGKKTH 324 (343)
Q Consensus 309 ~~L~~aGf~~v~~~~~ 324 (343)
++++++||++......
T Consensus 190 ~~l~~aGf~v~~~~~~ 205 (218)
T 3ou2_A 190 ERLTALGWSCSVDEVH 205 (218)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHCCCEEEeeecc
Confidence 9999999996655543
No 31
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.64 E-value=3.5e-15 Score=134.23 Aligned_cols=141 Identities=16% Similarity=0.242 Sum_probs=103.0
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
.+.+.+... ++++.+|||||||+|.++..+++. +..++++|.++.+.+.+++.. ...++.++.++..+++
T Consensus 42 ~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~ 111 (242)
T 3l8d_A 42 TIIPFFEQY--VKKEAEVLDVGCGDGYGTYKLSRT----GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLP 111 (242)
T ss_dssp THHHHHHHH--SCTTCEEEEETCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCS
T ss_pred HHHHHHHHH--cCCCCeEEEEcCCCCHHHHHHHHc----CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCC
Confidence 455666544 457889999999999999999984 334555565666666555432 2235667766544443
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------------cccCCCHHHHHHH
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------------FCSRLGGEECTKR 310 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------------~~~~~~~~~l~~~ 310 (343)
+ .+++||+|++..+++|+++... ++++++++|+| ||++++..... ....+.++++.++
T Consensus 112 -~-~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~L~p-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (242)
T 3l8d_A 112 -F-ENEQFEAIMAINSLEWTEEPLR--ALNEIKRVLKS-DGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQL 186 (242)
T ss_dssp -S-CTTCEEEEEEESCTTSSSCHHH--HHHHHHHHEEE-EEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHH
T ss_pred -C-CCCCccEEEEcChHhhccCHHH--HHHHHHHHhCC-CeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHH
Confidence 2 3679999999999999988765 99999999999 99999874111 1122458899999
Q ss_pred HHhcCCcEEEeee
Q 019282 311 LTSLGLEYIGKKT 323 (343)
Q Consensus 311 L~~aGf~~v~~~~ 323 (343)
++++||+++....
T Consensus 187 l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 187 VKEQGFKVVDGIG 199 (242)
T ss_dssp HHHTTEEEEEEEE
T ss_pred HHHcCCEEEEeec
Confidence 9999999998663
No 32
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.62 E-value=3.8e-15 Score=138.33 Aligned_cols=147 Identities=21% Similarity=0.330 Sum_probs=102.0
Q ss_pred HHHHHHHHh-cCCCCCCeEEEEcCCcCHHHHHHHHHcCC-CceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC
Q 019282 168 DVFEFLAEA-SHITPNSHVLEIGCGTLRVGVHFIRYLNP-ENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 168 ~~~~~l~~~-~~l~~~~rVLDIGCGtG~~a~~la~~~~~-~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d 245 (343)
..++.+.+. ..+.++.+|||||||+|.++..+++.++. ..++++|+++ .+.+.+++.... . ..++.+..++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~--~~~~~a~~~~~~-~-~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGE--TLLAEARELFRL-L-PYDSEFLEGDATE 83 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCH--HHHHHHHHHHHS-S-SSEEEEEESCTTT
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHh-c-CCceEEEEcchhh
Confidence 344445444 36778899999999999999999987763 4555555555 444444443221 1 1156666664443
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc------cc---------------------
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI------KF--------------------- 298 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~------~~--------------------- 298 (343)
++.+++||+|++..+++|+++... ++++++++||| ||++++.... .+
T Consensus 84 ---~~~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (284)
T 3gu3_A 84 ---IELNDKYDIAICHAFLLHMTTPET--MLQKMIHSVKK-GGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFE 157 (284)
T ss_dssp ---CCCSSCEEEEEEESCGGGCSSHHH--HHHHHHHTEEE-EEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHH
T ss_pred ---cCcCCCeeEEEECChhhcCCCHHH--HHHHHHHHcCC-CCEEEEEecchhcccccceecCcchhhccchHHHHHHHH
Confidence 334579999999999999988765 99999999999 9999987432 00
Q ss_pred ------cc-CCCHHHHHHHHHhcCCcEEEeeec
Q 019282 299 ------CS-RLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 299 ------~~-~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
.. ....+++.++|+++||+.+.....
T Consensus 158 ~~~~~~~~~~~~~~~l~~~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 158 SDTQRNGKDGNIGMKIPIYLSELGVKNIECRVS 190 (284)
T ss_dssp HHHHHTCCCTTGGGTHHHHHHHTTCEEEEEEEC
T ss_pred HHhhhhcccccHHHHHHHHHHHcCCCeEEEEEc
Confidence 00 111567889999999999977543
No 33
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.62 E-value=6.3e-15 Score=135.35 Aligned_cols=153 Identities=10% Similarity=-0.043 Sum_probs=106.6
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC----------C------C
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ----------G------L 231 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~----------~------~ 231 (343)
.+.+.+.......++.+|||+|||+|..+..|++ .++.|+++|.++.+.+.+++.... + .
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~----~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~ 130 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFAD----RGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKS 130 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHH----TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEE
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHH----CCCeEEEEECCHHHHHHHHHhccccccccccccccccccccc
Confidence 3444444333446788999999999999999998 466788888888888776543210 0 0
Q ss_pred CCCCcEEEecccCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEE-Eecccc----cc--CCCH
Q 019282 232 LHKRPIIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFV-SHNIKF----CS--RLGG 304 (343)
Q Consensus 232 ~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi-~~~~~~----~~--~~~~ 304 (343)
...++.++.++..+++ ....++||+|++..+++|++......+++++.++||| ||++++ +...+. .. .+.+
T Consensus 131 ~~~~i~~~~~D~~~l~-~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lkp-GG~l~l~~~~~~~~~~~g~~~~~~~ 208 (252)
T 2gb4_A 131 SSGSISLYCCSIFDLP-RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRK-EFQYLVAVLSYDPTKHAGPPFYVPS 208 (252)
T ss_dssp TTSSEEEEESCTTTGG-GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEE-EEEEEEEEEECCTTSCCCSSCCCCH
T ss_pred CCCceEEEECccccCC-cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCC-CeEEEEEEEecCCccCCCCCCCCCH
Confidence 1235677776444443 1112799999999999999887777799999999999 999964 322110 01 1458
Q ss_pred HHHHHHHHhcCCcEEEeeecccc
Q 019282 305 EECTKRLTSLGLEYIGKKTHDSL 327 (343)
Q Consensus 305 ~~l~~~L~~aGf~~v~~~~~~~l 327 (343)
+++.+.+.. +|+++.....+.+
T Consensus 209 ~el~~~l~~-~f~v~~~~~~~~~ 230 (252)
T 2gb4_A 209 AELKRLFGT-KCSMQCLEEVDAL 230 (252)
T ss_dssp HHHHHHHTT-TEEEEEEEEEECC
T ss_pred HHHHHHhhC-CeEEEEEeccccc
Confidence 999999977 6998887765543
No 34
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.61 E-value=5.7e-15 Score=136.50 Aligned_cols=134 Identities=14% Similarity=0.185 Sum_probs=96.8
Q ss_pred HhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCc
Q 019282 175 EASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVV 254 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~ 254 (343)
+.+.+.++.+|||||||+|.++..+++ +.. .++++|.++.+.+.+++.. .++.+..++..+++ .+++
T Consensus 51 ~~l~~~~~~~vLDiGcG~G~~~~~l~~--~~~--~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~---~~~~ 117 (279)
T 3ccf_A 51 QLLNPQPGEFILDLGCGTGQLTEKIAQ--SGA--EVLGTDNAATMIEKARQNY------PHLHFDVADARNFR---VDKP 117 (279)
T ss_dssp HHHCCCTTCEEEEETCTTSHHHHHHHH--TTC--EEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCC---CSSC
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHh--CCC--eEEEEECCHHHHHHHHhhC------CCCEEEECChhhCC---cCCC
Confidence 334677888999999999999999988 333 4555555556655554422 24455555444433 4579
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------------------c---ccCCCHHHHH
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------------------F---CSRLGGEECT 308 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------------------~---~~~~~~~~l~ 308 (343)
||+|++..+++|+++... +|++++++||| ||++++..... . ...+..+++.
T Consensus 118 fD~v~~~~~l~~~~d~~~--~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (279)
T 3ccf_A 118 LDAVFSNAMLHWVKEPEA--AIASIHQALKS-GGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYV 194 (279)
T ss_dssp EEEEEEESCGGGCSCHHH--HHHHHHHHEEE-EEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHH
T ss_pred cCEEEEcchhhhCcCHHH--HHHHHHHhcCC-CcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHH
Confidence 999999999999998765 99999999999 99999863211 0 0122488999
Q ss_pred HHHHhcCCcEEEeeec
Q 019282 309 KRLTSLGLEYIGKKTH 324 (343)
Q Consensus 309 ~~L~~aGf~~v~~~~~ 324 (343)
++|+++||+++.....
T Consensus 195 ~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 195 NILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHHTEEEEEEEEE
T ss_pred HHHHHcCCEEEEEEEe
Confidence 9999999999876543
No 35
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.61 E-value=4.7e-15 Score=134.89 Aligned_cols=145 Identities=16% Similarity=0.202 Sum_probs=99.7
Q ss_pred HHHHHHHH-hcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 168 DVFEFLAE-ASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 168 ~~~~~l~~-~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
.+.+.+.. ...+.++.+|||||||+|.++..+++. +..++++|.++.+.+.+++.. .+. ..++.+..++..++
T Consensus 25 ~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~-~~~-~~~~~~~~~d~~~~ 98 (263)
T 2yqz_A 25 QIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR----GYRYIALDADAAMLEVFRQKI-AGV-DRKVQVVQADARAI 98 (263)
T ss_dssp HHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT----TCEEEEEESCHHHHHHHHHHT-TTS-CTTEEEEESCTTSC
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC----CCEEEEEECCHHHHHHHHHHh-hcc-CCceEEEEcccccC
Confidence 34444433 236778899999999999999999874 334555555555555555433 111 23566666644443
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc---c---------------c-------cC
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK---F---------------C-------SR 301 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~---~---------------~-------~~ 301 (343)
+ + .+++||+|++..++||+++... ++++++++||| ||.+++..... . . ..
T Consensus 99 ~-~-~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (263)
T 2yqz_A 99 P-L-PDESVHGVIVVHLWHLVPDWPK--VLAEAIRVLKP-GGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHA 173 (263)
T ss_dssp C-S-CTTCEEEEEEESCGGGCTTHHH--HHHHHHHHEEE-EEEEEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHH
T ss_pred C-C-CCCCeeEEEECCchhhcCCHHH--HHHHHHHHCCC-CcEEEEEecCCCccHHHHHHHHHHHHHHHhCCCccccccc
Confidence 3 2 3578999999999999987655 99999999999 99998863221 0 0 01
Q ss_pred CCHHHHHHHHHhcCCcEEEeee
Q 019282 302 LGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 302 ~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
+..+++.++|+++||+++....
T Consensus 174 ~~~~~~~~~l~~~Gf~~~~~~~ 195 (263)
T 2yqz_A 174 KRLKEVEEALRRLGLKPRTREV 195 (263)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCHHHHHHHHHHcCCCcceEEE
Confidence 1277888999999999776544
No 36
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.61 E-value=3.9e-15 Score=134.54 Aligned_cols=144 Identities=20% Similarity=0.197 Sum_probs=99.9
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIY 259 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIv 259 (343)
+++.+|||||||+|.++..+++.. ...++++|+++ .+.+.+++...... ..++.++.++..++. . .+++||+|+
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~-~-~~~~fD~v~ 151 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL-FREVDMVDITE--DFLVQAKTYLGEEG-KRVRNYFCCGLQDFT-P-EPDSYDVIW 151 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCH--HHHHHHHHHTGGGG-GGEEEEEECCGGGCC-C-CSSCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCH--HHHHHHHHHhhhcC-CceEEEEEcChhhcC-C-CCCCEEEEE
Confidence 367899999999999999888754 23455555555 44444444322110 113455555333333 2 356899999
Q ss_pred EccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc----------ccCCCHHHHHHHHHhcCCcEEEeeecccccc
Q 019282 260 ASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF----------CSRLGGEECTKRLTSLGLEYIGKKTHDSLLF 329 (343)
Q Consensus 260 s~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~----------~~~~~~~~l~~~L~~aGf~~v~~~~~~~l~~ 329 (343)
+..+++|++++....+|++++++||| ||++++...... ......+++.++++++||+++.......++.
T Consensus 152 ~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~ 230 (241)
T 2ex4_A 152 IQWVIGHLTDQHLAEFLRRCKGSLRP-NGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENLPD 230 (241)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECCSCCT
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCC-CeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecCCCcc
Confidence 99999999987766799999999999 999998642111 1112489999999999999999877665554
Q ss_pred c
Q 019282 330 N 330 (343)
Q Consensus 330 ~ 330 (343)
.
T Consensus 231 ~ 231 (241)
T 2ex4_A 231 E 231 (241)
T ss_dssp T
T ss_pred h
Confidence 3
No 37
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.61 E-value=5.5e-15 Score=131.87 Aligned_cols=139 Identities=14% Similarity=0.203 Sum_probs=97.0
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCC---CCCcEEEecccCCcCCCCCCCc
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLL---HKRPIIVRGEDMDFTKFGSGVV 254 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~---~~~~~~~~~~~~dl~~~~~~~~ 254 (343)
++++.+|||||||+|.++..+++. +..++++|.++.+.+.+++... .+.. ..++.+..++..+++ + .+++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~-~~~~ 101 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK----GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS-F-HDSS 101 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-S-CTTC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC----CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC-C-CCCc
Confidence 457889999999999999999985 3344455555555555444332 2221 113455555433333 2 3678
Q ss_pred eeEEEEccccccCCchH-HHHHHHHHHhccCCCCcEEEEEeccc------------------------------------
Q 019282 255 YDLIYASAVFLHMPDKL-VWVGLERLASKLRPYDGRIFVSHNIK------------------------------------ 297 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~-~~~~L~~l~r~LkP~GG~lvi~~~~~------------------------------------ 297 (343)
||+|++..+++|+++.. ...++++++++||| ||++++.....
T Consensus 102 ~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (235)
T 3sm3_A 102 FDFAVMQAFLTSVPDPKERSRIIKEVFRVLKP-GAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEF 180 (235)
T ss_dssp EEEEEEESCGGGCCCHHHHHHHHHHHHHHEEE-EEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEE
T ss_pred eeEEEEcchhhcCCCHHHHHHHHHHHHHHcCC-CeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcce
Confidence 99999999999998754 44599999999999 99998873110
Q ss_pred cccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 298 FCSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 298 ~~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
....++.+++.++|+++||+++.....
T Consensus 181 ~~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 181 IAHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp EEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred eeEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 112346999999999999999987654
No 38
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.61 E-value=6.5e-15 Score=135.51 Aligned_cols=149 Identities=21% Similarity=0.281 Sum_probs=106.1
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
+.+.+.+.....++++.+|||||||+|.++..+++..+...++++|+++..... +++... .+. . ++.++.++..+
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~--a~~~~~~~~~-~-~~~~~~~d~~~ 98 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEK--ARENTEKNGI-K-NVKFLQANIFS 98 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHH--HHHHHHHTTC-C-SEEEEECCGGG
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHH--HHHHHHHcCC-C-CcEEEEccccc
Confidence 345555655566788999999999999999999998766666666665554444 443322 222 2 46666654444
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc--------------------------c
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF--------------------------C 299 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~--------------------------~ 299 (343)
++ + .+++||+|++..+++|+++... ++++++++||| ||++++...... .
T Consensus 99 ~~-~-~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (276)
T 3mgg_A 99 LP-F-EDSSFDHIFVCFVLEHLQSPEE--ALKSLKKVLKP-GGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKG 173 (276)
T ss_dssp CC-S-CTTCEEEEEEESCGGGCSCHHH--HHHHHHHHEEE-EEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTC
T ss_pred CC-C-CCCCeeEEEEechhhhcCCHHH--HHHHHHHHcCC-CcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCC
Confidence 33 2 3679999999999999998765 99999999999 999998642100 0
Q ss_pred cCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 300 SRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 300 ~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
..+...++.++|+++||+++.....
T Consensus 174 ~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 174 NSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp CTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred CcchHHHHHHHHHHCCCCeEEEeeE
Confidence 1122578889999999999987754
No 39
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.61 E-value=2.9e-15 Score=139.74 Aligned_cols=140 Identities=16% Similarity=0.179 Sum_probs=93.2
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHH----cCCCceEEEEcChhHHHHHHHHhcccC--CCCCCCcEEEecccCCcC-----C
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRY----LNPENFHCLERDELSLMAAFRYELPSQ--GLLHKRPIIVRGEDMDFT-----K 248 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~----~~~~~~~vvdid~s~~~~a~a~~~~~~--~~~~~~~~~~~~~~~dl~-----~ 248 (343)
.++.+|||||||+|.++..++.. .+...+.++++|++..|.+.+++.... +..+....+..++..++. .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 56779999999999877654432 233322347778887877766654332 221111122222222222 0
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-------------------cccCCCHHHHHH
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-------------------FCSRLGGEECTK 309 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-------------------~~~~~~~~~l~~ 309 (343)
+ .+++||+|++..++||+++... .|++++++||| ||++++..... ....+..+++.+
T Consensus 131 ~-~~~~fD~V~~~~~l~~~~d~~~--~l~~~~r~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (292)
T 2aot_A 131 K-ELQKWDFIHMIQMLYYVKDIPA--TLKFFHSLLGT-NAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQ 206 (292)
T ss_dssp T-CCCCEEEEEEESCGGGCSCHHH--HHHHHHHTEEE-EEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHH
T ss_pred c-CCCceeEEEEeeeeeecCCHHH--HHHHHHHHcCC-CcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHH
Confidence 1 3578999999999999998866 99999999999 99998863111 112245899999
Q ss_pred HHHhcCCcEEEeee
Q 019282 310 RLTSLGLEYIGKKT 323 (343)
Q Consensus 310 ~L~~aGf~~v~~~~ 323 (343)
+|+++||+++....
T Consensus 207 ~l~~aGf~~~~~~~ 220 (292)
T 2aot_A 207 MLDNLGLKYECYDL 220 (292)
T ss_dssp HHHHHTCCEEEEEE
T ss_pred HHHHCCCceEEEEe
Confidence 99999999876433
No 40
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.60 E-value=1.8e-14 Score=129.46 Aligned_cols=141 Identities=13% Similarity=0.081 Sum_probs=99.0
Q ss_pred HHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCC
Q 019282 172 FLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGS 251 (343)
Q Consensus 172 ~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~ 251 (343)
.+...++..++.+|||||||+|.++..+++. +...++++| .++.+.+.+++... ..++.+..++..+++ + .
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD--~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~-~-~ 104 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLD--LSEKMLARARAAGP----DTGITYERADLDKLH-L-P 104 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEE--SCHHHHHHHHHTSC----SSSEEEEECCGGGCC-C-C
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEc--CCHHHHHHHHHhcc----cCCceEEEcChhhcc-C-C
Confidence 3444566678899999999999999999884 222444554 45555555554322 124556655433333 2 3
Q ss_pred CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc------------------------c---------
Q 019282 252 GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK------------------------F--------- 298 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~------------------------~--------- 298 (343)
+++||+|++..+++|+++... +|++++++||| ||++++..... +
T Consensus 105 ~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYVEDVAR--LFRTVHQALSP-GGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTD 181 (243)
T ss_dssp TTCEEEEEEESCGGGCSCHHH--HHHHHHHHEEE-EEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTT
T ss_pred CCCceEEEEeccccccchHHH--HHHHHHHhcCc-CcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeee
Confidence 678999999999999987655 99999999999 99999863110 0
Q ss_pred -------ccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 299 -------CSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 299 -------~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
...++.+++.++|+++||+++.....
T Consensus 182 ~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 182 WLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred eccCceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 00135899999999999999887654
No 41
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.59 E-value=1.7e-14 Score=132.56 Aligned_cols=156 Identities=11% Similarity=0.048 Sum_probs=105.2
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhH----HHHHHHHhcccCCCCCCCcEEEe
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELS----LMAAFRYELPSQGLLHKRPIIVR 240 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~----~~~a~a~~~~~~~~~~~~~~~~~ 240 (343)
+.+....+.+.+.++++.+|||||||+|.++..+++.. +...++++|+++.. .+.+.++++........++.+..
T Consensus 28 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~ 107 (275)
T 3bkx_A 28 QTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHF 107 (275)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEEC
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 44566667777788999999999999999999999876 33455555555430 13334443322211122556665
Q ss_pred cccCCcCCCC-CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc----------------------
Q 019282 241 GEDMDFTKFG-SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK---------------------- 297 (343)
Q Consensus 241 ~~~~dl~~~~-~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~---------------------- 297 (343)
++.......+ .+++||+|++..+++|++++.. +++.+.++++| ||++++.....
T Consensus 108 ~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~--~~~~~~~l~~~-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (275)
T 3bkx_A 108 NTNLSDDLGPIADQHFDRVVLAHSLWYFASANA--LALLFKNMAAV-CDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYA 184 (275)
T ss_dssp SCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHH--HHHHHHHHTTT-CSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHH
T ss_pred CChhhhccCCCCCCCEEEEEEccchhhCCCHHH--HHHHHHHHhCC-CCEEEEEEecCCCCchhhhhHHHHHHHHHHHhh
Confidence 5300011111 3578999999999999998865 88888999999 99999863100
Q ss_pred -------c-ccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 298 -------F-CSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 298 -------~-~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
. ...++.+++.++++++||+++.....
T Consensus 185 ~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 185 IAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 0 01234889999999999999987765
No 42
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.59 E-value=9.3e-16 Score=150.03 Aligned_cols=148 Identities=17% Similarity=0.164 Sum_probs=107.2
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM 244 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 244 (343)
..+.+.+.+.+...+.++.+|||||||+|.++..+++ .+..++++|++..+.+.+++. +.......+..+...
T Consensus 91 ~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~----~g~~v~gvD~s~~~~~~a~~~---~~~~~~~~~~~~~~~ 163 (416)
T 4e2x_A 91 HFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQE----AGVRHLGFEPSSGVAAKAREK---GIRVRTDFFEKATAD 163 (416)
T ss_dssp HHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHH----TTCEEEEECCCHHHHHHHHTT---TCCEECSCCSHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHH----cCCcEEEECCCHHHHHHHHHc---CCCcceeeechhhHh
Confidence 3456677777778888899999999999999999988 355788888888888777653 221101111111111
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc---------------ccccCCCHHHHHH
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI---------------KFCSRLGGEECTK 309 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~---------------~~~~~~~~~~l~~ 309 (343)
+++ + .+++||+|++..+++|+++... +|++++++||| ||++++.... .....++.+++.+
T Consensus 164 ~l~-~-~~~~fD~I~~~~vl~h~~d~~~--~l~~~~r~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 238 (416)
T 4e2x_A 164 DVR-R-TEGPANVIYAANTLCHIPYVQS--VLEGVDALLAP-DGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQG 238 (416)
T ss_dssp HHH-H-HHCCEEEEEEESCGGGCTTHHH--HHHHHHHHEEE-EEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHH
T ss_pred hcc-c-CCCCEEEEEECChHHhcCCHHH--HHHHHHHHcCC-CeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHH
Confidence 111 1 2578999999999999997765 99999999999 9999997421 1122345899999
Q ss_pred HHHhcCCcEEEeeec
Q 019282 310 RLTSLGLEYIGKKTH 324 (343)
Q Consensus 310 ~L~~aGf~~v~~~~~ 324 (343)
+++++||+++.....
T Consensus 239 ll~~aGf~~~~~~~~ 253 (416)
T 4e2x_A 239 MAQRCGFELVDVQRL 253 (416)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCEEEEEEEc
Confidence 999999999887653
No 43
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.59 E-value=3.3e-15 Score=139.60 Aligned_cols=148 Identities=16% Similarity=0.175 Sum_probs=99.8
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCC--CCCcEEEecccCCc
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLL--HKRPIIVRGEDMDF 246 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~--~~~~~~~~~~~~dl 246 (343)
....+.+.+...++ +|||||||+|.++..+++. ...++++|++ +.+.+.+++....... ..++.++.++..++
T Consensus 71 ~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 71 EAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL--GWEVTALELS--TSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp HHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT--TCCEEEEESC--HHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred HHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc--CCeEEEEECC--HHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 44445444454444 9999999999999999884 2344555554 4555544443322110 02567777644443
Q ss_pred CCCCCCCceeEEEEc-cccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc---------------------------
Q 019282 247 TKFGSGVVYDLIYAS-AVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF--------------------------- 298 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~-~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~--------------------------- 298 (343)
+.+++||+|++. .+++|+++.....+|++++++||| ||+|++......
T Consensus 146 ---~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 221 (299)
T 3g2m_A 146 ---ALDKRFGTVVISSGSINELDEADRRGLYASVREHLEP-GGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRH 221 (299)
T ss_dssp ---CCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEE-EEEEEEEEECCHHHHSCCCCC-------------CCEEE
T ss_pred ---CcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCC-CcEEEEEeecCccccccchhccceeecCCCcEEEEEEEE
Confidence 346799999865 677777766667799999999999 999998621100
Q ss_pred ---------------------------ccCCCHHHHHHHHHhcCCcEEEeeecc
Q 019282 299 ---------------------------CSRLGGEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 299 ---------------------------~~~~~~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
...++.+++.++|+++||+++......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 222 LPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp EEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred eccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 012358999999999999999877543
No 44
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.59 E-value=9.8e-15 Score=131.11 Aligned_cols=133 Identities=17% Similarity=0.101 Sum_probs=95.7
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
.++.+|||||||+|.++..+++. +..++++|.++.+.+.+++... .+. ++.++.++..+ .+..++||+|
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~----~~~~~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~---~~~~~~fD~v 105 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK----FKNTWAVDLSQEMLSEAENKFRSQGL---KPRLACQDISN---LNINRKFDLI 105 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG----SSEEEEECSCHHHHHHHHHHHHHTTC---CCEEECCCGGG---CCCSCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC----CCcEEEEECCHHHHHHHHHHHhhcCC---CeEEEeccccc---CCccCCceEE
Confidence 36789999999999999999874 3456666666666665554332 222 45566553333 3233789999
Q ss_pred EEcc-ccccCCc-hHHHHHHHHHHhccCCCCcEEEEEeccc---------------------------------------
Q 019282 259 YASA-VFLHMPD-KLVWVGLERLASKLRPYDGRIFVSHNIK--------------------------------------- 297 (343)
Q Consensus 259 vs~~-v~~hl~~-~~~~~~L~~l~r~LkP~GG~lvi~~~~~--------------------------------------- 297 (343)
++.. +++|+++ .....+|++++++||| ||.+++.....
T Consensus 106 ~~~~~~l~~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (246)
T 1y8c_A 106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKE-GGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFF 184 (246)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHTTEEE-EEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEcCccccccCCHHHHHHHHHHHHHhcCC-CcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEE
Confidence 9998 9999944 4556699999999999 99998852100
Q ss_pred --------------cccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 298 --------------FCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 298 --------------~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
....++.+++.++|+++||+++....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 224 (246)
T 1y8c_A 185 VRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVD 224 (246)
T ss_dssp EECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEc
Confidence 01334699999999999999988754
No 45
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.59 E-value=1.1e-14 Score=133.06 Aligned_cols=111 Identities=19% Similarity=0.218 Sum_probs=78.5
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
..+.+.+... ++++.+|||||||+|.++..+++. +..++++|.++.+.+.+++.. . ++.++.++..+
T Consensus 38 ~~~~~~l~~~--~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~----~--~~~~~~~d~~~- 104 (263)
T 3pfg_A 38 ADLAALVRRH--SPKAASLLDVACGTGMHLRHLADS----FGTVEGLELSADMLAIARRRN----P--DAVLHHGDMRD- 104 (263)
T ss_dssp HHHHHHHHHH--CTTCCEEEEETCTTSHHHHHHTTT----SSEEEEEESCHHHHHHHHHHC----T--TSEEEECCTTT-
T ss_pred HHHHHHHHhh--CCCCCcEEEeCCcCCHHHHHHHHc----CCeEEEEECCHHHHHHHHhhC----C--CCEEEECChHH-
Confidence 4455555543 356789999999999999998874 234555555555555555422 1 45666654333
Q ss_pred CCCCCCCceeEEEEcc-ccccCCc-hHHHHHHHHHHhccCCCCcEEEEE
Q 019282 247 TKFGSGVVYDLIYASA-VFLHMPD-KLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~-v~~hl~~-~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
++.+++||+|++.. +++|+++ .....+|++++++||| ||++++.
T Consensus 105 --~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~p-gG~l~i~ 150 (263)
T 3pfg_A 105 --FSLGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLP-DGVVVVE 150 (263)
T ss_dssp --CCCSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEE-EEEEEEC
T ss_pred --CCccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCC-CcEEEEE
Confidence 33467999999998 9999965 3455689999999999 9999984
No 46
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.59 E-value=3.2e-14 Score=126.30 Aligned_cols=141 Identities=16% Similarity=0.116 Sum_probs=97.4
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIY 259 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIv 259 (343)
.++.+|||||||+|.++..+++. + .. ++++|.+..+.+.+++.. ..+..++..++.....+++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~--~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~ 98 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TR--VSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVI 98 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CE--EEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-Ce--EEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEE
Confidence 67789999999999999999885 3 44 444555555555554321 134444333321111357899999
Q ss_pred EccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-------------------------cccCCCHHHHHHHHHhc
Q 019282 260 ASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-------------------------FCSRLGGEECTKRLTSL 314 (343)
Q Consensus 260 s~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-------------------------~~~~~~~~~l~~~L~~a 314 (343)
+..+++|+++... ++++++++|+| ||.+++..... ....++.+++.++++++
T Consensus 99 ~~~~l~~~~~~~~--~l~~~~~~L~~-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 175 (230)
T 3cc8_A 99 FGDVLEHLFDPWA--VIEKVKPYIKQ-NGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKA 175 (230)
T ss_dssp EESCGGGSSCHHH--HHHHTGGGEEE-EEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHT
T ss_pred ECChhhhcCCHHH--HHHHHHHHcCC-CCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHc
Confidence 9999999988765 99999999999 99999874210 01224589999999999
Q ss_pred CCcEEEeeeccccccchhHHhh
Q 019282 315 GLEYIGKKTHDSLLFNHYEIWF 336 (343)
Q Consensus 315 Gf~~v~~~~~~~l~~~~~e~w~ 336 (343)
||+++......... ..+..|.
T Consensus 176 Gf~~~~~~~~~~~~-~~~~~~~ 196 (230)
T 3cc8_A 176 GYSISKVDRVYVDH-KMYEPLI 196 (230)
T ss_dssp TEEEEEEEEEECCC-GGGHHHH
T ss_pred CCeEEEEEecccCh-hhccchH
Confidence 99998877644332 3444444
No 47
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.59 E-value=5.6e-15 Score=126.04 Aligned_cols=129 Identities=13% Similarity=0.123 Sum_probs=96.2
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
+.+.++.+|||||||+|.++..+++.. ..++++|.++.+.+.+++. ..++.+..++ .+ + .+++||
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~~----~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~-~-~~~~~D 77 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEFA----TKLYCIDINVIALKEVKEK------FDSVITLSDP---KE-I-PDNSVD 77 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTTE----EEEEEECSCHHHHHHHHHH------CTTSEEESSG---GG-S-CTTCEE
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhhc----CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CC-C-CCCceE
Confidence 356778899999999999999999854 2566666666666655543 2256666553 22 3 357899
Q ss_pred EEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc--------ccccCCCHHHHHHHHHhcCCcEEEeeecc
Q 019282 257 LIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI--------KFCSRLGGEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 257 lIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~--------~~~~~~~~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
+|++..+++|+++... ++++++++||| ||++++.... .....+..+++.++++ ||+++......
T Consensus 78 ~v~~~~~l~~~~~~~~--~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~ 149 (170)
T 3i9f_A 78 FILFANSFHDMDDKQH--VISEVKRILKD-DGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPT 149 (170)
T ss_dssp EEEEESCSTTCSCHHH--HHHHHHHHEEE-EEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSS
T ss_pred EEEEccchhcccCHHH--HHHHHHHhcCC-CCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCC
Confidence 9999999999987765 99999999999 9999987421 1233356889999888 99998876543
No 48
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=2.9e-14 Score=130.71 Aligned_cols=140 Identities=13% Similarity=0.135 Sum_probs=101.4
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
..+.+.+.+.+.+.++.+|||||||+|.++..+++ .+..++++|.++.+.+.+++. . ++.++.++..++
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~----~---~~~~~~~d~~~~ 88 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN----QGLFVYAVEPSIVMRQQAVVH----P---QVEWFTGYAENL 88 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT----TTCEEEEECSCHHHHHSSCCC----T---TEEEECCCTTSC
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh----CCCEEEEEeCCHHHHHHHHhc----c---CCEEEECchhhC
Confidence 34666677777788899999999999999999987 345677777777777644321 1 566666544443
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe-ccc-----cc------------cCC-CHHHH
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH-NIK-----FC------------SRL-GGEEC 307 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~-~~~-----~~------------~~~-~~~~l 307 (343)
+ + .+++||+|++..+++|+++... ++++++++|| ||++++.. ... +. ..+ ..+++
T Consensus 89 ~-~-~~~~fD~v~~~~~l~~~~~~~~--~l~~~~~~Lk--gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (261)
T 3ege_A 89 A-L-PDKSVDGVISILAIHHFSHLEK--SFQEMQRIIR--DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQI 162 (261)
T ss_dssp C-S-CTTCBSEEEEESCGGGCSSHHH--HHHHHHHHBC--SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHH
T ss_pred C-C-CCCCEeEEEEcchHhhccCHHH--HHHHHHHHhC--CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHH
Confidence 3 2 3579999999999999987765 9999999999 78766652 111 10 112 26778
Q ss_pred HHHHHhcCCcEEEeeec
Q 019282 308 TKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 308 ~~~L~~aGf~~v~~~~~ 324 (343)
. +|+++||+.+.....
T Consensus 163 ~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 163 N-LLQENTKRRVEAIPF 178 (261)
T ss_dssp H-HHHHHHCSEEEEEEC
T ss_pred H-HHHHcCCCceeEEEe
Confidence 8 999999998887654
No 49
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.57 E-value=1.4e-14 Score=135.96 Aligned_cols=141 Identities=15% Similarity=0.160 Sum_probs=99.2
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHH-HHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCce
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFI-RYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la-~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
..++++.+|||||||+|.++..++ ...+...++++|+++ .+.+.++++.......+++.++.++..+++ ..++|
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~f 188 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDP--EALDGATRLAAGHALAGQITLHRQDAWKLD---TREGY 188 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCH--HHHHHHHHHHTTSTTGGGEEEEECCGGGCC---CCSCE
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECchhcCC---ccCCe
Confidence 456788999999999999999885 334444555555555 445444544332222334677776444433 34899
Q ss_pred eEEEEccccccCCchHH-HHHHHHHHhccCCCCcEEEEEecc---------ccc-------------------------c
Q 019282 256 DLIYASAVFLHMPDKLV-WVGLERLASKLRPYDGRIFVSHNI---------KFC-------------------------S 300 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~-~~~L~~l~r~LkP~GG~lvi~~~~---------~~~-------------------------~ 300 (343)
|+|+++.+++|++++.. ..++++++++||| ||++++.... .+. .
T Consensus 189 D~v~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDDARVTELYRRFWQALKP-GGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNA 267 (305)
T ss_dssp EEEECCSSGGGCCCHHHHHHHHHHHHHHEEE-EEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCC
T ss_pred EEEEECChhhhcCCHHHHHHHHHHHHHhcCC-CeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhc
Confidence 99999999999977643 3579999999999 9999987411 100 1
Q ss_pred CCCHHHHHHHHHhcCCcEEEeee
Q 019282 301 RLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 301 ~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
.++.+++.+.|+++||+++....
T Consensus 268 ~~~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 268 LRTHAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHCCCEEEEEEc
Confidence 24589999999999999988764
No 50
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.57 E-value=1.8e-14 Score=125.36 Aligned_cols=137 Identities=16% Similarity=0.202 Sum_probs=94.2
Q ss_pred HhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCC
Q 019282 175 EASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGV 253 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~ 253 (343)
+.+...++.+|||||||+|.++..+++. +..++++|.++.+.+.+++... .+. .++.+..++..+++ .++
T Consensus 26 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~d~~~~~---~~~ 96 (199)
T 2xvm_A 26 EAVKVVKPGKTLDLGCGNGRNSLYLAAN----GYDVDAWDKNAMSIANVERIKSIENL--DNLHTRVVDLNNLT---FDR 96 (199)
T ss_dssp HHTTTSCSCEEEEETCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHHTC--TTEEEEECCGGGCC---CCC
T ss_pred HHhhccCCCeEEEEcCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHHhCCC--CCcEEEEcchhhCC---CCC
Confidence 3345567789999999999999999884 3345555555555554444322 222 13556655333332 367
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc---------ccccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI---------KFCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~---------~~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
+||+|++..+++|++......+++++.++||| ||.+++.... .+...+..+++.+++++ |+++....
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~ 172 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKP-GGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNE 172 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEE-EEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEEC
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCC-CeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEecc
Confidence 89999999999999866667799999999999 9998775311 11123358889888876 98887653
No 51
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.56 E-value=2e-14 Score=133.16 Aligned_cols=143 Identities=14% Similarity=0.153 Sum_probs=97.4
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.++++.+|||||||+|.++..+++. +...++++|+++ .+.+.+++.........++.++.++..+++ +..+++||+
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~fD~ 136 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAE--VSINDARVRARNMKRRFKVFFRAQDSYGRH-MDLGKEFDV 136 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCH--HHHHHHHHHHHTSCCSSEEEEEESCTTTSC-CCCSSCEEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCH--HHHHHHHHHHHhcCCCccEEEEECCccccc-cCCCCCcCE
Confidence 3578889999999999999998774 333455555555 444444443322111224566666444433 223678999
Q ss_pred EEEcccccc--CCchHHHHHHHHHHhccCCCCcEEEEEeccc----------------------------c---------
Q 019282 258 IYASAVFLH--MPDKLVWVGLERLASKLRPYDGRIFVSHNIK----------------------------F--------- 298 (343)
Q Consensus 258 Ivs~~v~~h--l~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~----------------------------~--------- 298 (343)
|++..++|| ........+|++++++||| ||++++..... .
T Consensus 137 v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 215 (298)
T 1ri5_A 137 ISSQFSFHYAFSTSESLDIAQRNIARHLRP-GGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFT 215 (298)
T ss_dssp EEEESCGGGGGSSHHHHHHHHHHHHHTEEE-EEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEE
T ss_pred EEECchhhhhcCCHHHHHHHHHHHHHhcCC-CCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEE
Confidence 999999988 4445556699999999999 99999873210 0
Q ss_pred ---------ccCCCHHHHHHHHHhcCCcEEEeeecc
Q 019282 299 ---------CSRLGGEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 299 ---------~~~~~~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
...++++++.++++++||+++......
T Consensus 216 l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 216 LLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp ETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred EchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 011247999999999999999876544
No 52
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.56 E-value=3.6e-14 Score=134.61 Aligned_cols=142 Identities=16% Similarity=0.054 Sum_probs=102.7
Q ss_pred HhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCC
Q 019282 175 EASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGV 253 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~ 253 (343)
+.....+..+|||||||+|.++..+++.++...++++|+ + .+.+.+++... .+. ..++.+..++.. ..+ + .
T Consensus 163 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~--~~~~~a~~~~~~~~~-~~~v~~~~~d~~--~~~-p-~ 234 (332)
T 3i53_A 163 AKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-Q--GPASAAHRRFLDTGL-SGRAQVVVGSFF--DPL-P-A 234 (332)
T ss_dssp GSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H--HHHHHHHHHHHHTTC-TTTEEEEECCTT--SCC-C-C
T ss_pred HhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-H--HHHHHHHHhhhhcCc-CcCeEEecCCCC--CCC-C-C
Confidence 334456678999999999999999999887766666665 4 34444443322 333 236777766332 222 2 2
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc-----------------ccCCCHHHHHHHHHhcCC
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF-----------------CSRLGGEECTKRLTSLGL 316 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~-----------------~~~~~~~~l~~~L~~aGf 316 (343)
.||+|++..++||++++....+|++++++||| ||++++...... ...++.+++.++++++||
T Consensus 235 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf 313 (332)
T 3i53_A 235 GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGS-GGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGL 313 (332)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTT-TCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTE
T ss_pred CCcEEEEehhhccCCHHHHHHHHHHHHHhcCC-CCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCC
Confidence 89999999999999998777899999999999 999998742110 123458999999999999
Q ss_pred cEEEeeecc
Q 019282 317 EYIGKKTHD 325 (343)
Q Consensus 317 ~~v~~~~~~ 325 (343)
++++.....
T Consensus 314 ~~~~~~~~~ 322 (332)
T 3i53_A 314 AVRAAHPIS 322 (332)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEECC
Confidence 998876543
No 53
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.56 E-value=5e-14 Score=133.24 Aligned_cols=148 Identities=15% Similarity=0.147 Sum_probs=105.1
Q ss_pred HHHHHHHHhcCC--CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 168 DVFEFLAEASHI--TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 168 ~~~~~l~~~~~l--~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
.....+.+.... .++.+|||||||+|.++..+++.++...++++|++ .+.+.+++... .+. ..++.++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~a~~~~~~~~~-~~~v~~~~~--- 222 (335)
T 2r3s_A 150 NPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA---SVLEVAKENARIQGV-ASRYHTIAG--- 222 (335)
T ss_dssp HHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH---HHHHHHHHHHHHHTC-GGGEEEEES---
T ss_pred hhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH---HHHHHHHHHHHhcCC-CcceEEEec---
Confidence 344455555566 77889999999999999999998766555555555 34444443322 232 225666665
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc----------------------cccCC
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK----------------------FCSRL 302 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~----------------------~~~~~ 302 (343)
|+.+.+..+.||+|++..++||++++....+|++++++|+| ||++++..... ....+
T Consensus 223 d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (335)
T 2r3s_A 223 SAFEVDYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAV-EGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAY 301 (335)
T ss_dssp CTTTSCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCC
T ss_pred ccccCCCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCC-CcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcC
Confidence 33322233459999999999999888777899999999999 99988863211 11234
Q ss_pred CHHHHHHHHHhcCCcEEEeee
Q 019282 303 GGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 303 ~~~~l~~~L~~aGf~~v~~~~ 323 (343)
+.+++.++++++||+.++...
T Consensus 302 t~~~~~~ll~~aGf~~~~~~~ 322 (335)
T 2r3s_A 302 TFAEYESMFSNAGFSHSQLHS 322 (335)
T ss_dssp CHHHHHHHHHHTTCSEEEEEC
T ss_pred CHHHHHHHHHHCCCCeeeEEE
Confidence 589999999999999988654
No 54
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.56 E-value=2.7e-14 Score=138.57 Aligned_cols=141 Identities=14% Similarity=0.158 Sum_probs=100.2
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhHHHHHHHHhcccC------C-CCCCCcEEEecccCCcC---
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELSLMAAFRYELPSQ------G-LLHKRPIIVRGEDMDFT--- 247 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~~~~a~a~~~~~~------~-~~~~~~~~~~~~~~dl~--- 247 (343)
+.++.+|||||||+|.++..+++.+ +...++++|+++ .+.+.++++... | ....++.++.++..++.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLD--NQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCH--HHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence 5578899999999999999999876 344555555544 555555543221 2 22246777777555542
Q ss_pred --CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc------------------cccCCCHHHH
Q 019282 248 --KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK------------------FCSRLGGEEC 307 (343)
Q Consensus 248 --~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~------------------~~~~~~~~~l 307 (343)
.+ .+++||+|+++.+++|+++... +|++++++||| ||++++..... ....+..+++
T Consensus 159 ~~~~-~~~~fD~V~~~~~l~~~~d~~~--~l~~~~r~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
T 4fsd_A 159 PEGV-PDSSVDIVISNCVCNLSTNKLA--LFKEIHRVLRD-GGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDF 234 (383)
T ss_dssp SCCC-CTTCEEEEEEESCGGGCSCHHH--HHHHHHHHEEE-EEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHH
T ss_pred cCCC-CCCCEEEEEEccchhcCCCHHH--HHHHHHHHcCC-CCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHH
Confidence 12 3679999999999999988755 99999999999 99999873111 0112347999
Q ss_pred HHHHHhcCCcEEEeeecc
Q 019282 308 TKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 308 ~~~L~~aGf~~v~~~~~~ 325 (343)
.++|+++||+.++.....
T Consensus 235 ~~ll~~aGF~~v~~~~~~ 252 (383)
T 4fsd_A 235 RRLVAEAGFRDVRLVSVG 252 (383)
T ss_dssp HHHHHHTTCCCEEEEEEE
T ss_pred HHHHHHCCCceEEEEecc
Confidence 999999999987655433
No 55
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.56 E-value=2.5e-14 Score=126.75 Aligned_cols=131 Identities=17% Similarity=0.154 Sum_probs=90.9
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC--CCCCCCce
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT--KFGSGVVY 255 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~--~~~~~~~f 255 (343)
...++.+|||||||+|.++..+++. +..++++|.++.+.+.+++. ....+..++..++. ....+++|
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 49 LGRQPERVLDLGCGEGWLLRALADR----GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp HHTCCSEEEEETCTTCHHHHHHHTT----TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCE
T ss_pred hcCCCCEEEEeCCCCCHHHHHHHHC----CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCc
Confidence 3445689999999999999999884 33455555555666655543 12333433333331 12345569
Q ss_pred eEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc---------------------------ccCCCHHHHH
Q 019282 256 DLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF---------------------------CSRLGGEECT 308 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~---------------------------~~~~~~~~l~ 308 (343)
|+|++..+++ ..+... ++++++++||| ||++++...... ...++.+++.
T Consensus 118 D~v~~~~~l~-~~~~~~--~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (227)
T 3e8s_A 118 DLICANFALL-HQDIIE--LLSAMRTLLVP-GGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWL 193 (227)
T ss_dssp EEEEEESCCC-SSCCHH--HHHHHHHTEEE-EEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHH
T ss_pred cEEEECchhh-hhhHHH--HHHHHHHHhCC-CeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHH
Confidence 9999999998 555544 99999999999 999998742110 0113589999
Q ss_pred HHHHhcCCcEEEeee
Q 019282 309 KRLTSLGLEYIGKKT 323 (343)
Q Consensus 309 ~~L~~aGf~~v~~~~ 323 (343)
++|+++||+++....
T Consensus 194 ~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 194 NALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHHTTEEEEEEEC
T ss_pred HHHHHcCCeEEEEec
Confidence 999999999998665
No 56
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.55 E-value=8.6e-15 Score=136.87 Aligned_cols=140 Identities=18% Similarity=0.223 Sum_probs=95.9
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCC----------------------------
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGL---------------------------- 231 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~---------------------------- 231 (343)
.++.+|||||||+|.++..+++.++...++++|+++..+..+ ++......
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSA--RQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHH--HHTC--------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHH--HHHHHhhhhhhccccccccccccccccccccccccc
Confidence 357899999999999999999988767767777766555544 43322110
Q ss_pred -----------------------------CCCCcEEEecccCCcC----CCCCCCceeEEEEccccccC----CchHHHH
Q 019282 232 -----------------------------LHKRPIIVRGEDMDFT----KFGSGVVYDLIYASAVFLHM----PDKLVWV 274 (343)
Q Consensus 232 -----------------------------~~~~~~~~~~~~~dl~----~~~~~~~fDlIvs~~v~~hl----~~~~~~~ 274 (343)
...++.+..++..+.. .+ ..+.||+|+|..+++|+ .+.....
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~-~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEA-QTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTT-CCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccc-cCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 0025666665332211 11 35789999999999887 5556667
Q ss_pred HHHHHHhccCCCCcEEEEEecc--cc---------------ccCCCHHHHHHHHHh--cCCcEEEeee
Q 019282 275 GLERLASKLRPYDGRIFVSHNI--KF---------------CSRLGGEECTKRLTS--LGLEYIGKKT 323 (343)
Q Consensus 275 ~L~~l~r~LkP~GG~lvi~~~~--~~---------------~~~~~~~~l~~~L~~--aGf~~v~~~~ 323 (343)
+|++++++||| ||+|++.... .+ ...+.++++.++|.+ +||+.++...
T Consensus 202 ~l~~~~~~Lkp-GG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 202 MFRRIYRHLRP-GGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHHHHHEEE-EEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHHHHHhCC-CcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEec
Confidence 99999999999 9999997210 00 012237889999998 9998776554
No 57
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.55 E-value=1.3e-13 Score=133.07 Aligned_cols=146 Identities=23% Similarity=0.198 Sum_probs=106.9
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~ 247 (343)
....+.+..++.+..+|||||||+|.++..+++.++...++++|+ + .+.+.+++... .+. ..++.+..+ |+.
T Consensus 190 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~--~~~~~a~~~~~~~~l-~~~v~~~~~---d~~ 262 (369)
T 3gwz_A 190 EAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-P--PVAEEARELLTGRGL-ADRCEILPG---DFF 262 (369)
T ss_dssp HHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H--HHHHHHHHHHHHTTC-TTTEEEEEC---CTT
T ss_pred hHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-H--HHHHHHHHhhhhcCc-CCceEEecc---CCC
Confidence 345566667778889999999999999999999887666666665 4 34444443322 333 336777766 333
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc-------------------ccCCCHHHHH
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF-------------------CSRLGGEECT 308 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~-------------------~~~~~~~~l~ 308 (343)
+. ....||+|++..++|+++++....+|++++++||| ||++++...... ...++.+++.
T Consensus 263 ~~-~p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~ 340 (369)
T 3gwz_A 263 ET-IPDGADVYLIKHVLHDWDDDDVVRILRRIATAMKP-DSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFA 340 (369)
T ss_dssp TC-CCSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT-TCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHH
T ss_pred CC-CCCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCC-CCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHH
Confidence 22 12389999999999999998877799999999999 999998632110 1124589999
Q ss_pred HHHHhcCCcEEEeee
Q 019282 309 KRLTSLGLEYIGKKT 323 (343)
Q Consensus 309 ~~L~~aGf~~v~~~~ 323 (343)
++++++||++++...
T Consensus 341 ~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 341 ALLEKSGLRVERSLP 355 (369)
T ss_dssp HHHHTTTEEEEEEEE
T ss_pred HHHHHCCCeEEEEEE
Confidence 999999999988754
No 58
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.55 E-value=3.1e-14 Score=135.94 Aligned_cols=144 Identities=10% Similarity=0.036 Sum_probs=103.4
Q ss_pred HHHHhcCCCC-CCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCC
Q 019282 172 FLAEASHITP-NSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 172 ~l~~~~~l~~-~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~ 249 (343)
.+.+..++.+ +.+|||||||+|.++..+++.++...++++|+ +. +.+.+++... .+. ..++.++.++..+.+.+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~--~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~~ 244 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PT--TRDAARKTIHAHDL-GGRVEFFEKNLLDARNF 244 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GG--GHHHHHHHHHHTTC-GGGEEEEECCTTCGGGG
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HH--HHHHHHHHHHhcCC-CCceEEEeCCcccCccc
Confidence 4555566666 78999999999999999999887777777776 33 3333333222 232 23566776633322211
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc-------c---------------cccCCCHHHH
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI-------K---------------FCSRLGGEEC 307 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~-------~---------------~~~~~~~~~l 307 (343)
..+.||+|++..++||++++....+|++++++||| ||++++.... . ....++.+++
T Consensus 245 -~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~ 322 (352)
T 3mcz_A 245 -EGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKP-GGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWI 322 (352)
T ss_dssp -TTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEE-EEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHH
T ss_pred -CCCCccEEEEecccccCCHHHHHHHHHHHHHHcCC-CCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHH
Confidence 34579999999999999998777899999999999 9999886311 0 1123458999
Q ss_pred HHHHHhcCCcEEEe
Q 019282 308 TKRLTSLGLEYIGK 321 (343)
Q Consensus 308 ~~~L~~aGf~~v~~ 321 (343)
.++++++||++++.
T Consensus 323 ~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 323 AGVVRDAGLAVGER 336 (352)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHCCCceeee
Confidence 99999999999874
No 59
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=7.1e-14 Score=120.69 Aligned_cols=130 Identities=18% Similarity=0.186 Sum_probs=94.9
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
++++.+|||||||+|.++..+++. +..++++|.++.+.+.+++.. .++.++.++..+++ + .+++||+|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~----~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~-~-~~~~~D~i 111 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ----GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQ-I-SETDFDLI 111 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT----TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSC-C-CCCCEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC----CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCC-C-CCCceeEE
Confidence 567889999999999999999884 234455555555555444422 13455555333332 2 35789999
Q ss_pred EEc-cccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 259 YAS-AVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 259 vs~-~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
++. .+++|++.+....+++++.++|+| ||.+++.... ...+..+++.+.++++||+++....
T Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~-~G~l~~~~~~--~~~~~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 112 VSAGNVMGFLAEDGREPALANIHRALGA-DGRAVIGFGA--GRGWVFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEET--TSSCCHHHHHHHHHHHTEEEEEEES
T ss_pred EECCcHHhhcChHHHHHHHHHHHHHhCC-CCEEEEEeCC--CCCcCHHHHHHHHHHcCCEEeeeec
Confidence 998 789998777677799999999999 9999987532 2335689999999999999887643
No 60
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.54 E-value=7.8e-14 Score=126.58 Aligned_cols=147 Identities=14% Similarity=0.097 Sum_probs=98.0
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcCC-CceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC-CCCc
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLNP-ENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG-SGVV 254 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~~-~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~-~~~~ 254 (343)
++++||.+|||+|||+|.++.++++...+ ..++++|+++.+...+ ++.... . .++..+.++..+...+. ..+.
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l--~~~a~~-~--~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDL--LTVVRD-R--RNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHH--HHHSTT-C--TTEEEEESCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHH--HHhhHh-h--cCeeEEEEeccCccccccccce
Confidence 56899999999999999999999998754 4456666666554444 332221 1 24555655443333222 3578
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccc---cCCC--HHHHHHHHHhcCCcEEEeeecccccc
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFC---SRLG--GEECTKRLTSLGLEYIGKKTHDSLLF 329 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~---~~~~--~~~l~~~L~~aGf~~v~~~~~~~l~~ 329 (343)
+|+|++... |-.+.. .++.++++.||| ||++++....... .... -.+..+.|+++||+.++.....++.+
T Consensus 148 vDvVf~d~~--~~~~~~--~~l~~~~r~LKp-GG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~ 222 (233)
T 4df3_A 148 VDGLYADVA--QPEQAA--IVVRNARFFLRD-GGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPFDR 222 (233)
T ss_dssp EEEEEECCC--CTTHHH--HHHHHHHHHEEE-EEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTTTST
T ss_pred EEEEEEecc--CChhHH--HHHHHHHHhccC-CCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCCCCC
Confidence 999987532 333333 489999999999 9999987421111 1111 23345678899999999888888888
Q ss_pred chhH
Q 019282 330 NHYE 333 (343)
Q Consensus 330 ~~~e 333 (343)
+|+.
T Consensus 223 ~H~l 226 (233)
T 4df3_A 223 DHAM 226 (233)
T ss_dssp TEEE
T ss_pred ceEE
Confidence 8864
No 61
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.53 E-value=3.8e-14 Score=125.52 Aligned_cols=135 Identities=16% Similarity=0.182 Sum_probs=92.3
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
.....+.......++.+|||||||+|.++..+++.. ..++++|.++.+.+.+++.... ..++.++.++..+
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~~d~~~-- 108 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC----KRLTVIDVMPRAIGRACQRTKR---WSHISWAATDILQ-- 108 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE----EEEEEEESCHHHHHHHHHHTTT---CSSEEEEECCTTT--
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC----CEEEEEECCHHHHHHHHHhccc---CCCeEEEEcchhh--
Confidence 444555555677788899999999999999998853 3455555555555555543322 1256666664433
Q ss_pred CCCCCCceeEEEEccccccCCch-HHHHHHHHHHhccCCCCcEEEEEeccc-----cccCCCHHHHHHHHHh
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDK-LVWVGLERLASKLRPYDGRIFVSHNIK-----FCSRLGGEECTKRLTS 313 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~-~~~~~L~~l~r~LkP~GG~lvi~~~~~-----~~~~~~~~~l~~~L~~ 313 (343)
+..+++||+|++..+++|++++ ....++++++++||| ||.+++..... +......+.+...+.+
T Consensus 109 -~~~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (216)
T 3ofk_A 109 -FSTAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAP-GGHLVFGSARDATCRRWGHVAGAETVITILTE 178 (216)
T ss_dssp -CCCSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEE-EEEEEEEEECHHHHHHTTCSCCHHHHHHHHHH
T ss_pred -CCCCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCC-CCEEEEEecCCCcchhhhhhhhHHHHHHHHHh
Confidence 3356899999999999999974 444689999999999 99999874221 2223346666666643
No 62
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.53 E-value=1.1e-13 Score=132.25 Aligned_cols=143 Identities=17% Similarity=0.131 Sum_probs=102.6
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~ 249 (343)
...+.+..+++++.+|||||||+|.++..+++.++.. .++++|.+.... .......+. ..++.++.++.. ...
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~--~~~~~~~~~-~~~v~~~~~d~~--~~~ 245 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGL--QGVLLDRAEVVA--RHRLDAPDV-AGRWKVVEGDFL--REV 245 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTE--EEEEEECHHHHT--TCCCCCGGG-TTSEEEEECCTT--TCC
T ss_pred HHHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCC--EEEEecCHHHhh--cccccccCC-CCCeEEEecCCC--CCC
Confidence 3456666778888999999999999999999987654 455555544333 111111222 235677765322 222
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc--------------------cccCCCHHHHHH
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK--------------------FCSRLGGEECTK 309 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~--------------------~~~~~~~~~l~~ 309 (343)
. .||+|++..++||++++....+|++++++||| ||++++.+... ....++.+++.+
T Consensus 246 --p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lkp-gG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ 321 (348)
T 3lst_A 246 --P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPA-HGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEP 321 (348)
T ss_dssp --C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCT-TCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHH
T ss_pred --C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCC-CCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHH
Confidence 2 89999999999999998767799999999999 99999874210 011234899999
Q ss_pred HHHhcCCcEEEeee
Q 019282 310 RLTSLGLEYIGKKT 323 (343)
Q Consensus 310 ~L~~aGf~~v~~~~ 323 (343)
+++++||++++...
T Consensus 322 ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 322 LFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHTTEEEEEEEE
T ss_pred HHHHCCCceEEEEE
Confidence 99999999988765
No 63
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.52 E-value=3e-13 Score=129.72 Aligned_cols=148 Identities=11% Similarity=0.121 Sum_probs=106.9
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl 246 (343)
...+.+.+...+.++.+|||||||+|.++..+++.++...++++|+ +.....+ ++... .+. .+++.++.++..+.
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a--~~~~~~~~~-~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLV--NENAAEKGV-ADRMRGIAVDIYKE 252 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHH--HHHHHHTTC-TTTEEEEECCTTTS
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHH--HHHHHhcCC-CCCEEEEeCccccC
Confidence 3445666667788889999999999999999999887666677776 5444433 33322 233 33577776633332
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-----------------c--ccC----CC
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-----------------F--CSR----LG 303 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-----------------~--~~~----~~ 303 (343)
+.. .+|+|++..++||++++....+|++++++||| ||++++..... . ... ++
T Consensus 253 ---~~~-~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t 327 (359)
T 1x19_A 253 ---SYP-EADAVLFCRILYSANEQLSTIMCKKAFDAMRS-GGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKE 327 (359)
T ss_dssp ---CCC-CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT-TCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCC
T ss_pred ---CCC-CCCEEEEechhccCCHHHHHHHHHHHHHhcCC-CCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCC
Confidence 222 34999999999999987777799999999999 99998764110 0 112 56
Q ss_pred HHHHHHHHHhcCCcEEEeeec
Q 019282 304 GEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 304 ~~~l~~~L~~aGf~~v~~~~~ 324 (343)
.+++.++++++||+.++....
T Consensus 328 ~~e~~~ll~~aGf~~v~~~~~ 348 (359)
T 1x19_A 328 QARYKEILESLGYKDVTMVRK 348 (359)
T ss_dssp GGGHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEec
Confidence 899999999999998876653
No 64
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.52 E-value=1.9e-13 Score=131.49 Aligned_cols=146 Identities=21% Similarity=0.176 Sum_probs=104.2
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCC
Q 019282 171 EFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 171 ~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~ 249 (343)
..+.+...++++.+|||||||+|.++..+++.++...++++|+ + .+.+.+++... .+. ..++.++.++..+ .+
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~--~~~~~a~~~~~~~~~-~~~v~~~~~d~~~--~~ 245 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-A--GPAERARRRFADAGL-ADRVTVAEGDFFK--PL 245 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H--HHHHHHHHHHHHTTC-TTTEEEEECCTTS--CC
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-H--HHHHHHHHHHHhcCC-CCceEEEeCCCCC--cC
Confidence 4455556777889999999999999999999876555555555 4 44444444322 333 2356777663322 12
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec--c-cc-------------------ccCCCHHHH
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN--I-KF-------------------CSRLGGEEC 307 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~--~-~~-------------------~~~~~~~~l 307 (343)
...||+|++..++||++++....+|++++++||| ||++++... . +. ...++.+++
T Consensus 246 --~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (374)
T 1qzz_A 246 --PVTADVVLLSFVLLNWSDEDALTILRGCVRALEP-GGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEV 322 (374)
T ss_dssp --SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHH
T ss_pred --CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCC-CcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHH
Confidence 2349999999999999988766799999999999 999988654 1 10 112468999
Q ss_pred HHHHHhcCCcEEEeeecc
Q 019282 308 TKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 308 ~~~L~~aGf~~v~~~~~~ 325 (343)
.++++++||++++.....
T Consensus 323 ~~ll~~aGf~~~~~~~~~ 340 (374)
T 1qzz_A 323 VDLAGSAGLALASERTSG 340 (374)
T ss_dssp HHHHHTTTEEEEEEEEEC
T ss_pred HHHHHHCCCceEEEEECC
Confidence 999999999998876543
No 65
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.52 E-value=1.5e-13 Score=123.39 Aligned_cols=113 Identities=14% Similarity=0.133 Sum_probs=76.7
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
...+.+... ++++.+|||||||+|.++..+++. .. ++++|.++.+.+.+++...... .++.++.++..+
T Consensus 22 ~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~--v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~-- 90 (243)
T 3d2l_A 22 EWVAWVLEQ--VEPGKRIADIGCGTGTATLLLADH---YE--VTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRE-- 90 (243)
T ss_dssp HHHHHHHHH--SCTTCEEEEESCTTCHHHHHHTTT---SE--EEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGG--
T ss_pred HHHHHHHHH--cCCCCeEEEecCCCCHHHHHHhhC---Ce--EEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhh--
Confidence 345555544 456789999999999999988874 34 4444555555554444332111 245666553333
Q ss_pred CCCCCCceeEEEEcc-ccccCC-chHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 KFGSGVVYDLIYASA-VFLHMP-DKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~-v~~hl~-~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+..++||+|++.. +++|+. ......++++++++||| ||.+++.
T Consensus 91 -~~~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~p-gG~l~~~ 136 (243)
T 3d2l_A 91 -LELPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTD-GGKLLFD 136 (243)
T ss_dssp -CCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEE-EEEEEEE
T ss_pred -cCCCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCC-CeEEEEE
Confidence 33347899999986 999984 34556689999999999 9999874
No 66
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.52 E-value=6.1e-14 Score=127.62 Aligned_cols=143 Identities=12% Similarity=0.044 Sum_probs=93.7
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCC-C-----------------------
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLL-H----------------------- 233 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~-~----------------------- 233 (343)
...++.+|||||||+|.++..++.... . .++++|.++.+.+.+++....... .
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-T--EIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKE 129 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-E--EEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-C--eEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHH
Confidence 445678999999999999988876321 2 455555555555555443221100 0
Q ss_pred ----CCc-EEEecccCCcCCCCCC---CceeEEEEccccccCCch--HHHHHHHHHHhccCCCCcEEEEEeccc------
Q 019282 234 ----KRP-IIVRGEDMDFTKFGSG---VVYDLIYASAVFLHMPDK--LVWVGLERLASKLRPYDGRIFVSHNIK------ 297 (343)
Q Consensus 234 ----~~~-~~~~~~~~dl~~~~~~---~~fDlIvs~~v~~hl~~~--~~~~~L~~l~r~LkP~GG~lvi~~~~~------ 297 (343)
.++ .+..++..+.... .+ ++||+|++..+++|+... ....+|++++++||| ||++++.....
T Consensus 130 ~~l~~~v~~~~~~d~~~~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp-gG~li~~~~~~~~~~~~ 207 (265)
T 2i62_A 130 EKLRRAIKQVLKCDVTQSQPL-GGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKP-GGFLVMVDALKSSYYMI 207 (265)
T ss_dssp HHHHHHEEEEEECCTTSSSTT-TTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE-EEEEEEEEESSCCEEEE
T ss_pred HHhhhhheeEEEeeeccCCCC-CccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCC-CcEEEEEecCCCceEEc
Confidence 013 4555533333211 23 789999999999955432 445599999999999 99999874211
Q ss_pred -----cccCCCHHHHHHHHHhcCCcEEEeeecc
Q 019282 298 -----FCSRLGGEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 298 -----~~~~~~~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
....+..+++.+.|+++||+++......
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 208 GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 1223458899999999999998877543
No 67
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.52 E-value=7.3e-14 Score=129.52 Aligned_cols=122 Identities=18% Similarity=0.280 Sum_probs=81.2
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCC--CCCCcEEEeccc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGL--LHKRPIIVRGED 243 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~--~~~~~~~~~~~~ 243 (343)
....+.+...+...++.+|||||||+|.++..+++. +..++++|.++.+.+.+++... .+. ...++.+..++.
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~ 118 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE----GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh
Confidence 334455555555567889999999999999999884 3345555555555555543221 111 112344555433
Q ss_pred CCcC-CCCCCCceeEEEEc-cccccCCc-----hHHHHHHHHHHhccCCCCcEEEEE
Q 019282 244 MDFT-KFGSGVVYDLIYAS-AVFLHMPD-----KLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 244 ~dl~-~~~~~~~fDlIvs~-~v~~hl~~-----~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+++ ++..+++||+|++. .+++|+++ .....++++++++||| ||++++.
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~ 174 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP-GGLLVID 174 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE-EEEEEEE
T ss_pred hhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC-CeEEEEE
Confidence 3332 11135799999998 89999998 5556699999999999 9999986
No 68
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.51 E-value=2.8e-13 Score=121.30 Aligned_cols=110 Identities=19% Similarity=0.286 Sum_probs=76.7
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
.+.+.+.... +++.+|||||||+|.++..+++..+ .++++|+++ .+.+.+++.. .++.++.++..+
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~--~~~~~a~~~~------~~~~~~~~d~~~-- 94 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSE--DMLTHARKRL------PDATLHQGDMRD-- 94 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCH--HHHHHHHHHC------TTCEEEECCTTT--
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCH--HHHHHHHHhC------CCCEEEECCHHH--
Confidence 3445555433 6778999999999999999998653 455555554 5555444321 135556553333
Q ss_pred CCCCCCceeEEEE-ccccccCCc-hHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 KFGSGVVYDLIYA-SAVFLHMPD-KLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 ~~~~~~~fDlIvs-~~v~~hl~~-~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+..+++||+|+| ..+++|+++ .....+|++++++||| ||.+++.
T Consensus 95 -~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~p-gG~l~~~ 140 (239)
T 3bxo_A 95 -FRLGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEP-GGVVVVE 140 (239)
T ss_dssp -CCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEE-EEEEEEC
T ss_pred -cccCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCC-CeEEEEE
Confidence 333678999996 459999965 4556799999999999 9999886
No 69
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.51 E-value=1.4e-13 Score=132.50 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=99.0
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC--CCCCceeE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF--GSGVVYDL 257 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~--~~~~~fDl 257 (343)
.+..+|||||||+|.++..+++.++...++++|+ + .+.+.+++.........++.++.+ |+.+. +..+.||+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~--~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~p~~~D~ 251 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-P--QQLEMMRKQTAGLSGSERIHGHGA---NLLDRDVPFPTGFDA 251 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-H--HHHHHHHHHHTTCTTGGGEEEEEC---CCCSSSCCCCCCCSE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-H--HHHHHHHHHHHhcCcccceEEEEc---cccccCCCCCCCcCE
Confidence 4567999999999999999999887766666665 3 444444443322112235677766 33332 12368999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-------------------------cccCCCHHHHHHHHH
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-------------------------FCSRLGGEECTKRLT 312 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-------------------------~~~~~~~~~l~~~L~ 312 (343)
|++..++|+++++....+|++++++||| ||++++..... ....++.+++.++|+
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 330 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEVISILTRVAQSIGK-DSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIE 330 (363)
T ss_dssp EEEESCSTTSCHHHHHHHHHHHHHHCCT-TCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHH
T ss_pred EEEechhhhCCHHHHHHHHHHHHHhcCC-CcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHH
Confidence 9999999999998877899999999999 99998863110 011335899999999
Q ss_pred hcCCcEEEeee
Q 019282 313 SLGLEYIGKKT 323 (343)
Q Consensus 313 ~aGf~~v~~~~ 323 (343)
++||++++...
T Consensus 331 ~AGf~~v~~~~ 341 (363)
T 3dp7_A 331 NAGLEVEEIQD 341 (363)
T ss_dssp TTTEEESCCCC
T ss_pred HcCCeEEEEEe
Confidence 99999877653
No 70
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.51 E-value=6.9e-14 Score=129.50 Aligned_cols=130 Identities=16% Similarity=0.209 Sum_probs=91.7
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
.++.+|||||||+|.++..+++. +..++++|.++.+.+.+++... .+. ++.++.++..+ ...+++||+|
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~----g~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~---~~~~~~fD~i 188 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL----GYDVTSWDHNENSIAFLNETKEKENL---NISTALYDINA---ANIQENYDFI 188 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCGGG---CCCCSCEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHHHcCC---ceEEEEecccc---ccccCCccEE
Confidence 36789999999999999999984 3345555555555555554433 232 55666653333 3336799999
Q ss_pred EEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc---------cccCCCHHHHHHHHHhcCCcEEEee
Q 019282 259 YASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK---------FCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~---------~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
++..+++|++++....+++++.++||| ||.+++..... +...+..+++.+.+.. |+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 189 VSTVVFMFLNRERVPSIIKNMKEHTNV-GGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp EECSSGGGSCGGGHHHHHHHHHHTEEE-EEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred EEccchhhCCHHHHHHHHHHHHHhcCC-CcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 999999999888877899999999999 99987753211 1222337788887754 8877654
No 71
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.51 E-value=5.2e-14 Score=129.63 Aligned_cols=107 Identities=15% Similarity=0.151 Sum_probs=79.5
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
++++.|.+.. +.+.+|||||||+|.++..|++. ...++++|++..|.+.+++ ..++.+..++..+++
T Consensus 28 ~l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~----~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~ 94 (257)
T 4hg2_A 28 ALFRWLGEVA--PARGDALDCGCGSGQASLGLAEF----FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTG 94 (257)
T ss_dssp HHHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTT----CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCC
T ss_pred HHHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHh----CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhc
Confidence 3667776553 34579999999999999999884 3456677777777764432 125667776555544
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+ ++++||+|++..++||+.. .. ++++++|+||| ||+|++.
T Consensus 95 -~-~~~sfD~v~~~~~~h~~~~-~~--~~~e~~rvLkp-gG~l~~~ 134 (257)
T 4hg2_A 95 -L-PPASVDVAIAAQAMHWFDL-DR--FWAELRRVARP-GAVFAAV 134 (257)
T ss_dssp -C-CSSCEEEEEECSCCTTCCH-HH--HHHHHHHHEEE-EEEEEEE
T ss_pred -c-cCCcccEEEEeeehhHhhH-HH--HHHHHHHHcCC-CCEEEEE
Confidence 3 4789999999999988854 33 89999999999 9999775
No 72
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.50 E-value=1.5e-13 Score=123.71 Aligned_cols=153 Identities=11% Similarity=0.086 Sum_probs=97.5
Q ss_pred HHHHHHH---HHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc
Q 019282 167 RDVFEFL---AEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED 243 (343)
Q Consensus 167 ~~~~~~l---~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~ 243 (343)
....+.+ .+.+.+.++.+|||+|||+|.++..+++..+...++++|+++ .+.+.+++..... .++.++.++.
T Consensus 57 ~~~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~--~~~~~a~~~~~~~---~~v~~~~~d~ 131 (230)
T 1fbn_A 57 SKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAP--RIMRELLDACAER---ENIIPILGDA 131 (230)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCH--HHHHHHHHHTTTC---TTEEEEECCT
T ss_pred hHHHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCH--HHHHHHHHHhhcC---CCeEEEECCC
Confidence 3344555 444567788999999999999999999976644555555555 4444444333221 3566666644
Q ss_pred CCcCC-CCCCCceeEEEEccccccCCch-HHHHHHHHHHhccCCCCcEEEEEeccccccCCC-------HHHHHHHHHhc
Q 019282 244 MDFTK-FGSGVVYDLIYASAVFLHMPDK-LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLG-------GEECTKRLTSL 314 (343)
Q Consensus 244 ~dl~~-~~~~~~fDlIvs~~v~~hl~~~-~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~-------~~~l~~~L~~a 314 (343)
.+... ....+.||+|+ ++++++ ....+++++.++||| ||.+++..... +...+ .+++. .|+++
T Consensus 132 ~~~~~~~~~~~~~D~v~-----~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~-~~~~~~~~~~~~~~~l~-~l~~~ 203 (230)
T 1fbn_A 132 NKPQEYANIVEKVDVIY-----EDVAQPNQAEILIKNAKWFLKK-GGYGMIAIKAR-SIDVTKDPKEIFKEQKE-ILEAG 203 (230)
T ss_dssp TCGGGGTTTSCCEEEEE-----ECCCSTTHHHHHHHHHHHHEEE-EEEEEEEEEGG-GTCSSSCHHHHHHHHHH-HHHHH
T ss_pred CCcccccccCccEEEEE-----EecCChhHHHHHHHHHHHhCCC-CcEEEEEEecC-CCCCCCCHHHhhHHHHH-HHHHC
Confidence 43110 22236899998 455544 223479999999999 99999873211 11111 36676 88999
Q ss_pred CCcEEEeeeccccccchh
Q 019282 315 GLEYIGKKTHDSLLFNHY 332 (343)
Q Consensus 315 Gf~~v~~~~~~~l~~~~~ 332 (343)
||+.+.....+++...|+
T Consensus 204 Gf~~~~~~~~~~~~~~~~ 221 (230)
T 1fbn_A 204 GFKIVDEVDIEPFEKDHV 221 (230)
T ss_dssp TEEEEEEEECTTTSTTEE
T ss_pred CCEEEEEEccCCCccceE
Confidence 999988776655544444
No 73
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.50 E-value=2.2e-13 Score=129.15 Aligned_cols=146 Identities=17% Similarity=0.081 Sum_probs=105.2
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl 246 (343)
.....+.+..++.+ .+|||||||+|..+..+++.++...++++|+ +.....+ ++... .+. ..++.++.+ |+
T Consensus 155 ~~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a--~~~~~~~~~-~~~v~~~~~---d~ 226 (334)
T 2ip2_A 155 LAFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVA--RDNLSSLLA-GERVSLVGG---DM 226 (334)
T ss_dssp HHHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHH--HHHTHHHHH-TTSEEEEES---CT
T ss_pred HHHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHH--HHHHhhcCC-CCcEEEecC---CC
Confidence 34455666666777 8999999999999999999887666777776 5444333 33221 222 225667766 33
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc------c--------------ccCCCHHH
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK------F--------------CSRLGGEE 306 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~------~--------------~~~~~~~~ 306 (343)
.+. ..+.||+|++..++||++++....+|++++++||| ||++++..... . ...++.++
T Consensus 227 ~~~-~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 304 (334)
T 2ip2_A 227 LQE-VPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAG-DGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEE 304 (334)
T ss_dssp TTC-CCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCT-TCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHH
T ss_pred CCC-CCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCC-CCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHH
Confidence 321 23679999999999999988877799999999999 99999874210 0 12235899
Q ss_pred HHHHHHhcCCcEEEeee
Q 019282 307 CTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 307 l~~~L~~aGf~~v~~~~ 323 (343)
+.++++++||++++...
T Consensus 305 ~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 305 VVDLLGRGGFAVERIVD 321 (334)
T ss_dssp HHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHCCCceeEEEE
Confidence 99999999999887654
No 74
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.50 E-value=1.9e-13 Score=116.87 Aligned_cols=143 Identities=12% Similarity=0.042 Sum_probs=96.9
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
+.+...+.+.+.+.++.+|||||||+|.++..+++.++.. .++++|.++.+.+.++++.. .+.. .++ ++.++..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~-~~~-~~~~d~~~ 86 (178)
T 3hm2_A 11 QHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQT--TAVCFEISEERRERILSNAINLGVS-DRI-AVQQGAPR 86 (178)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSE--EEEEECSCHHHHHHHHHHHHTTTCT-TSE-EEECCTTG
T ss_pred HHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCC--eEEEEeCCHHHHHHHHHHHHHhCCC-CCE-EEecchHh
Confidence 4455666666788889999999999999999999866444 45555555555555554433 2332 244 55543322
Q ss_pred cCCCCC-CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 246 FTKFGS-GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 246 l~~~~~-~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
.++. .++||+|++...++| ..+++++.++||| ||++++..... .....+.+.+++.|++.......
T Consensus 87 --~~~~~~~~~D~i~~~~~~~~------~~~l~~~~~~L~~-gG~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 153 (178)
T 3hm2_A 87 --AFDDVPDNPDVIFIGGGLTA------PGVFAAAWKRLPV-GGRLVANAVTV----ESEQMLWALRKQFGGTISSFAIS 153 (178)
T ss_dssp --GGGGCCSCCSEEEECC-TTC------TTHHHHHHHTCCT-TCEEEEEECSH----HHHHHHHHHHHHHCCEEEEEEEE
T ss_pred --hhhccCCCCCEEEECCcccH------HHHHHHHHHhcCC-CCEEEEEeecc----ccHHHHHHHHHHcCCeeEEEEee
Confidence 1221 278999999999987 2389999999999 99999875211 12566788899999988775544
Q ss_pred cc
Q 019282 325 DS 326 (343)
Q Consensus 325 ~~ 326 (343)
..
T Consensus 154 ~~ 155 (178)
T 3hm2_A 154 HE 155 (178)
T ss_dssp EE
T ss_pred cC
Confidence 33
No 75
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.50 E-value=7.2e-14 Score=128.45 Aligned_cols=143 Identities=12% Similarity=0.041 Sum_probs=90.1
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCC--CCC----------------------
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQG--LLH---------------------- 233 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~--~~~---------------------- 233 (343)
+..++.+|||||||+|.++..++.. .... ++++|.++.+.+.+++..+.. ..+
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~-~~~~--v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~ 128 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD-SFQD--ITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKE 128 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG-TEEE--EEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh-hhcc--eeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHH
Confidence 5567889999999999887655542 1123 444555555555444332111 000
Q ss_pred ----CCcE-EEecccCCcCCCC--CCCceeEEEEccccccCC-c-hHHHHHHHHHHhccCCCCcEEEEEeccc-------
Q 019282 234 ----KRPI-IVRGEDMDFTKFG--SGVVYDLIYASAVFLHMP-D-KLVWVGLERLASKLRPYDGRIFVSHNIK------- 297 (343)
Q Consensus 234 ----~~~~-~~~~~~~dl~~~~--~~~~fDlIvs~~v~~hl~-~-~~~~~~L~~l~r~LkP~GG~lvi~~~~~------- 297 (343)
..+. ++.++..+...+. ..++||+|+++.++||+. + +....++++++++||| ||.|++.....
T Consensus 129 ~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKP-GG~li~~~~~~~~~~~~g 207 (263)
T 2a14_A 129 EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKP-GGHLVTTVTLRLPSYMVG 207 (263)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE-EEEEEEEEESSCCEEEET
T ss_pred HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCC-CcEEEEEEeecCccceeC
Confidence 0111 4444333211111 246899999999999963 2 3445699999999999 99999884211
Q ss_pred ---cc-cCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 298 ---FC-SRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 298 ---~~-~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
+. ..++.+++.+.|+++||+++.....
T Consensus 208 ~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 208 KREFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CeEeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 11 1246899999999999999887654
No 76
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.50 E-value=3.9e-13 Score=121.73 Aligned_cols=113 Identities=13% Similarity=0.212 Sum_probs=78.1
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~ 248 (343)
++.+......+++.+|||+|||+|.++..+++. +..++++|.++.+.+.+++... .+. ++.++.++..+
T Consensus 30 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~---~v~~~~~d~~~--- 99 (252)
T 1wzn_A 30 VEEIFKEDAKREVRRVLDLACGTGIPTLELAER----GYEVVGLDLHEEMLRVARRKAKERNL---KIEFLQGDVLE--- 99 (252)
T ss_dssp HHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTC---CCEEEESCGGG---
T ss_pred HHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHHhcCC---ceEEEECChhh---
Confidence 344444455567789999999999999999884 3445555555555555554332 222 46666654333
Q ss_pred CCCCCceeEEEEc-cccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYAS-AVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~-~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
....++||+|++. ..++|+.......++++++++||| ||.+++.
T Consensus 100 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~p-gG~li~~ 144 (252)
T 1wzn_A 100 IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKP-GGVFITD 144 (252)
T ss_dssp CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEE-EEEEEEE
T ss_pred cccCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCC-CeEEEEe
Confidence 3335689999987 456666666667799999999999 9999864
No 77
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.50 E-value=4e-13 Score=128.57 Aligned_cols=145 Identities=24% Similarity=0.201 Sum_probs=103.1
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCC
Q 019282 171 EFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 171 ~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~ 249 (343)
..+.+...+.++.+|||||||+|.++..+++..+...++++|+ +..... +++... .+. ..++.++.++..+ .+
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~--a~~~~~~~~~-~~~v~~~~~d~~~--~~ 246 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDT--ARSYLKDEGL-SDRVDVVEGDFFE--PL 246 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHH--HHHHHHHTTC-TTTEEEEECCTTS--CC
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHH--HHHHHHhcCC-CCceEEEeCCCCC--CC
Confidence 3445556778889999999999999999999876555555554 444333 333322 333 2356777663322 12
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc--cc-------------------ccCCCHHHHH
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI--KF-------------------CSRLGGEECT 308 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~--~~-------------------~~~~~~~~l~ 308 (343)
...||+|++..++||++++....++++++++||| ||++++.... +. ...++.+++.
T Consensus 247 --~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 323 (360)
T 1tw3_A 247 --PRKADAIILSFVLLNWPDHDAVRILTRCAEALEP-GGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWD 323 (360)
T ss_dssp --SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEE-EEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHH
T ss_pred --CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCC-CcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHH
Confidence 2359999999999999988766799999999999 9999887533 10 1123489999
Q ss_pred HHHHhcCCcEEEeeec
Q 019282 309 KRLTSLGLEYIGKKTH 324 (343)
Q Consensus 309 ~~L~~aGf~~v~~~~~ 324 (343)
++++++||+++.....
T Consensus 324 ~ll~~aGf~~~~~~~~ 339 (360)
T 1tw3_A 324 GLAASAGLVVEEVRQL 339 (360)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHCCCeEEEEEeC
Confidence 9999999999876654
No 78
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.49 E-value=1.6e-13 Score=122.14 Aligned_cols=122 Identities=18% Similarity=0.206 Sum_probs=89.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEc
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYAS 261 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~ 261 (343)
+.+|||||||+|.++..++. . +++|+++ .+.+.+++. ++.++.++..+++ + .+++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~----~--~~vD~s~--~~~~~a~~~--------~~~~~~~d~~~~~-~-~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKI----K--IGVEPSE--RMAEIARKR--------GVFVLKGTAENLP-L-KDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTC----C--EEEESCH--HHHHHHHHT--------TCEEEECBTTBCC-S-CTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHH----H--hccCCCH--HHHHHHHhc--------CCEEEEcccccCC-C-CCCCeeEEEEc
Confidence 78999999999999987765 2 5555555 444444432 3445555433333 2 35689999999
Q ss_pred cccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-------------------cccCCCHHHHHHHHHhcCCcEEEee
Q 019282 262 AVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-------------------FCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 262 ~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-------------------~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
.+++|+++... +|+++.++|+| ||.+++..... ....++.+++.++|+++||+++...
T Consensus 110 ~~l~~~~~~~~--~l~~~~~~L~p-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 110 TTICFVDDPER--ALKEAYRILKK-GGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp SCGGGSSCHHH--HHHHHHHHEEE-EEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred chHhhccCHHH--HHHHHHHHcCC-CcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 99999988755 99999999999 99999873211 1122458999999999999998866
Q ss_pred ec
Q 019282 323 TH 324 (343)
Q Consensus 323 ~~ 324 (343)
..
T Consensus 187 ~~ 188 (219)
T 1vlm_A 187 QT 188 (219)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 79
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.48 E-value=1.6e-13 Score=127.43 Aligned_cols=142 Identities=12% Similarity=0.093 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCC--CC------------C-----------
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGL--LH------------K----------- 234 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~--~~------------~----------- 234 (343)
.++.+|||||||+|..+..++. .... .++++|.++.+.+.+++...... .+ .
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~-~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 146 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSAC-SHFE--DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQ 146 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGG-GGCS--EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhc-cCCC--eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHH
Confidence 3678999999999995543333 2223 46666666666665544221100 00 0
Q ss_pred ----CcEEEecccCCcCCC----CCCCceeEEEEccccccCCch--HHHHHHHHHHhccCCCCcEEEEEecc--c-----
Q 019282 235 ----RPIIVRGEDMDFTKF----GSGVVYDLIYASAVFLHMPDK--LVWVGLERLASKLRPYDGRIFVSHNI--K----- 297 (343)
Q Consensus 235 ----~~~~~~~~~~dl~~~----~~~~~fDlIvs~~v~~hl~~~--~~~~~L~~l~r~LkP~GG~lvi~~~~--~----- 297 (343)
...++.++..+...+ ..+++||+|+++.+++|+... ....+|++++++||| ||+|++.... .
T Consensus 147 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lkp-GG~l~~~~~~~~~~~~~~ 225 (289)
T 2g72_A 147 LRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRP-GGHLLLIGALEESWYLAG 225 (289)
T ss_dssp HHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE-EEEEEEEEEESCCEEEET
T ss_pred HHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCC-CCEEEEEEecCcceEEcC
Confidence 012222222221111 124679999999999995432 445699999999999 9999986311 1
Q ss_pred ---c-ccCCCHHHHHHHHHhcCCcEEEeeecc
Q 019282 298 ---F-CSRLGGEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 298 ---~-~~~~~~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
+ ...++.+++.++|+++||+++......
T Consensus 226 ~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 226 EARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 1 223469999999999999998866543
No 80
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.48 E-value=1.1e-13 Score=127.71 Aligned_cols=114 Identities=15% Similarity=-0.000 Sum_probs=83.0
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
..+.+.+.+.+.++.+|||||||+|.++..+++. +..++++|.++.|.+.++++.... .+ ... ..++..
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~----g~~V~gvD~S~~ml~~Ar~~~~~~----~v-~~~--~~~~~~ 101 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALER----GASVTVFDFSQRMCDDLAEALADR----CV-TID--LLDITA 101 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT----TCEEEEEESCHHHHHHHHHHTSSS----CC-EEE--ECCTTS
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc----CCEEEEEECCHHHHHHHHHHHHhc----cc-eee--eeeccc
Confidence 4455666778889999999999999999999983 445666666667776666543221 11 111 122221
Q ss_pred ---CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 249 ---FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 249 ---~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
...+++||+|+++.+++|+........+.++.++| | ||+++++..
T Consensus 102 ~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-P-GG~l~lS~~ 149 (261)
T 3iv6_A 102 EIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-G-SGTVRASVK 149 (261)
T ss_dssp CCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-T-TSEEEEEEE
T ss_pred ccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-c-CcEEEEEec
Confidence 11256899999999999998877778999999999 9 999998853
No 81
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.47 E-value=1.4e-13 Score=122.28 Aligned_cols=143 Identities=14% Similarity=0.094 Sum_probs=91.8
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHH--HHhcccCCCCCCCcEEEecccCCcCCCCCCCce
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAF--RYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~--a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
.+.++.+|||||||+|.++..+++..+...++++|+++.++.... +++....... .++.++.++..+++ + .++.
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~-~-~~~~- 99 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLP-P-LSGV- 99 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCC-S-CCCE-
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCC-C-CCCC-
Confidence 466788999999999999999999776666667777665444221 2222221111 25667776555544 2 2334
Q ss_pred eEEEEc---ccc--ccCCchHHHHHHHHHHhccCCCCcEEEEEecccc----------ccCCC----HHHHHHHHHhcCC
Q 019282 256 DLIYAS---AVF--LHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF----------CSRLG----GEECTKRLTSLGL 316 (343)
Q Consensus 256 DlIvs~---~v~--~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~----------~~~~~----~~~l~~~L~~aGf 316 (343)
|.|+.. ... +|++++.. ++++++++||| ||++++..+... ...+. .+.+...++++||
T Consensus 100 d~v~~~~~~~~~~~~~~~~~~~--~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 176 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLGSSPE--MLRGMAAVCRP-GASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGW 176 (218)
T ss_dssp EEEEEESCCHHHHHHHHTSSSH--HHHHHHHTEEE-EEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTE
T ss_pred CEEEEEccchhhhhhhhccHHH--HHHHHHHHcCC-CcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCC
Confidence 666532 233 26666544 89999999999 999998742111 01112 4557889999999
Q ss_pred cEEEeeecccc
Q 019282 317 EYIGKKTHDSL 327 (343)
Q Consensus 317 ~~v~~~~~~~l 327 (343)
++......+.-
T Consensus 177 ~i~~~~~~~~~ 187 (218)
T 3mq2_A 177 KLADCRYLEPE 187 (218)
T ss_dssp EEEEEEEECHH
T ss_pred Cceeeeccchh
Confidence 99887765543
No 82
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.47 E-value=7e-13 Score=118.56 Aligned_cols=138 Identities=17% Similarity=0.117 Sum_probs=92.9
Q ss_pred cCCCCCCeEEEEcCC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCc
Q 019282 177 SHITPNSHVLEIGCG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVV 254 (343)
Q Consensus 177 ~~l~~~~rVLDIGCG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~ 254 (343)
..++++.+|||+||| +|.++..+++.. ...++++|+++.. .+.++++.. .+. ++.++.++...+..+. +++
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~--~~~a~~~~~~~~~---~v~~~~~d~~~~~~~~-~~~ 123 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEF--FEYARRNIERNNS---NVRLVKSNGGIIKGVV-EGT 123 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHH--HHHHHHHHHHTTC---CCEEEECSSCSSTTTC-CSC
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHH--HHHHHHHHHHhCC---CcEEEeCCchhhhhcc-cCc
Confidence 457789999999999 999999999865 3455566655544 444444333 333 5667766443344443 579
Q ss_pred eeEEEEccccccCCchH-----------------HHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCc
Q 019282 255 YDLIYASAVFLHMPDKL-----------------VWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLE 317 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~-----------------~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~ 317 (343)
||+|+++..+++.++.. ...+++++.++||| ||++++...... ...+++.+.++++||+
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~---~~~~~~~~~l~~~g~~ 199 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNP-GGKVALYLPDKE---KLLNVIKERGIKLGYS 199 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEE-EEEEEEEEESCH---HHHHHHHHHHHHTTCE
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCC-CeEEEEEecccH---hHHHHHHHHHHHcCCc
Confidence 99999998776654321 24589999999999 999988642111 1257788899999998
Q ss_pred EEEeeecc
Q 019282 318 YIGKKTHD 325 (343)
Q Consensus 318 ~v~~~~~~ 325 (343)
+...+...
T Consensus 200 ~~~~~~~~ 207 (230)
T 3evz_A 200 VKDIKFKV 207 (230)
T ss_dssp EEEEEECC
T ss_pred eEEEEecC
Confidence 77665433
No 83
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.47 E-value=1.9e-13 Score=118.20 Aligned_cols=140 Identities=8% Similarity=0.004 Sum_probs=84.7
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCce
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
..++++.+|||+|||+|.++..+++. +..++++|.++.+.+.++++.. .+. .++.++.++..++..+. +++|
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~la~~----~~~v~~vD~s~~~l~~a~~~~~~~~~--~~v~~~~~~~~~l~~~~-~~~f 90 (185)
T 3mti_A 18 EVLDDESIVVDATMGNGNDTAFLAGL----SKKVYAFDVQEQALGKTSQRLSDLGI--ENTELILDGHENLDHYV-REPI 90 (185)
T ss_dssp TTCCTTCEEEESCCTTSHHHHHHHTT----SSEEEEEESCHHHHHHHHHHHHHHTC--CCEEEEESCGGGGGGTC-CSCE
T ss_pred HhCCCCCEEEEEcCCCCHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHcCC--CcEEEEeCcHHHHHhhc-cCCc
Confidence 46778999999999999999999985 3345555555555555554433 333 35666665444443343 6789
Q ss_pred eEEEEccccccC-------CchHHHHHHHHHHhccCCCCcEEEEEeccccccCCC-HHHHHHHH---HhcCCcEEEeeec
Q 019282 256 DLIYASAVFLHM-------PDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLG-GEECTKRL---TSLGLEYIGKKTH 324 (343)
Q Consensus 256 DlIvs~~v~~hl-------~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~-~~~l~~~L---~~aGf~~v~~~~~ 324 (343)
|+|+++..+.+. ........++++.++||| ||++++........... .+.+.+++ ...+|.+......
T Consensus 91 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 169 (185)
T 3mti_A 91 RAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEV-GGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPL 169 (185)
T ss_dssp EEEEEEEC-----------CHHHHHHHHHHHHHHEEE-EEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEES
T ss_pred CEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCC-CcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhh
Confidence 999987322221 113344588999999999 99998874221111111 23344444 4456877766554
No 84
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.47 E-value=1.6e-12 Score=124.84 Aligned_cols=145 Identities=16% Similarity=0.068 Sum_probs=106.2
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~ 249 (343)
...+.+..++.+..+|||||||+|.++..+++.+|....++.|+ . .+.+.+++....+. ..++.++.+ |+.+.
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl--p-~v~~~a~~~~~~~~-~~rv~~~~g---D~~~~ 240 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI--P-EVVWTAKQHFSFQE-EEQIDFQEG---DFFKD 240 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC--H-HHHHHHHHHSCC---CCSEEEEES---CTTTS
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC--H-HHHHHHHHhhhhcc-cCceeeecC---ccccC
Confidence 34555556777788999999999999999999998776666554 2 23444444333333 347777776 44322
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc---c----c--------------ccCCCHHHHH
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI---K----F--------------CSRLGGEECT 308 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~---~----~--------------~~~~~~~~l~ 308 (343)
+ ...+|+|++..++|+++++....+|+++++.|+| ||+++|.+.. + . ...++.++|.
T Consensus 241 ~-~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~p-gg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~ 318 (353)
T 4a6d_A 241 P-LPEADLYILARVLHDWADGKCSHLLERIYHTCKP-GGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYH 318 (353)
T ss_dssp C-CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCT-TCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHH
T ss_pred C-CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCC-CCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHH
Confidence 2 3458999999999999999888899999999999 9999987421 0 0 1223589999
Q ss_pred HHHHhcCCcEEEeee
Q 019282 309 KRLTSLGLEYIGKKT 323 (343)
Q Consensus 309 ~~L~~aGf~~v~~~~ 323 (343)
++|+++||+.++...
T Consensus 319 ~ll~~AGf~~v~v~~ 333 (353)
T 4a6d_A 319 MLLSSAGFRDFQFKK 333 (353)
T ss_dssp HHHHHHTCEEEEEEC
T ss_pred HHHHHCCCceEEEEE
Confidence 999999999988654
No 85
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.47 E-value=2.5e-14 Score=129.72 Aligned_cols=136 Identities=15% Similarity=0.055 Sum_probs=86.5
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
..+|.+|||||||+|..+..+++..+ ..++++|+ ++.+.+.++++..... ..+.++.++..++.....+++||.|
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~--~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i 132 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIEC--NDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEEC--CHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeC--CHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceE
Confidence 35788999999999999998887433 34445554 5556665565443221 2445555544443322246789999
Q ss_pred EE-----ccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc----ccccCCC------HHHHHHHHHhcCCcEEEee
Q 019282 259 YA-----SAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI----KFCSRLG------GEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 259 vs-----~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~----~~~~~~~------~~~l~~~L~~aGf~~v~~~ 322 (343)
++ ....+|+++... ++++++|+||| ||+|++.... .....+. .+.+...|.++||+++...
T Consensus 133 ~~D~~~~~~~~~~~~~~~~--~~~e~~rvLkP-GG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~i~ 208 (236)
T 3orh_A 133 LYDTYPLSEETWHTHQFNF--IKNHAFRLLKP-GGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIR 208 (236)
T ss_dssp EECCCCCBGGGTTTHHHHH--HHHTHHHHEEE-EEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGGEE
T ss_pred EEeeeecccchhhhcchhh--hhhhhhheeCC-CCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEEEE
Confidence 75 445556666555 99999999999 9999875311 1111111 4556667889999865433
No 86
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.47 E-value=1.1e-12 Score=126.55 Aligned_cols=139 Identities=13% Similarity=0.080 Sum_probs=99.7
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 170 FEFLAEASH-ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 170 ~~~l~~~~~-l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
...+.+... +.+..+|||||||+|.++..+++.++...++++|+ +.+.+.+++ ..++.++.++..+ .
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~-------~~~v~~~~~d~~~--~ 258 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL---PHVIQDAPA-------FSGVEHLGGDMFD--G 258 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCC-------CTTEEEEECCTTT--C
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh---HHHHHhhhh-------cCCCEEEecCCCC--C
Confidence 344554444 66778999999999999999999887665555554 334432221 1356677663332 2
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-------------------------cccCCC
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-------------------------FCSRLG 303 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-------------------------~~~~~~ 303 (343)
+ +. . |+|++..++||++++....+|++++++||| ||+++|.+... ....++
T Consensus 259 ~-p~-~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt 334 (368)
T 3reo_A 259 V-PK-G-DAIFIKWICHDWSDEHCLKLLKNCYAALPD-HGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERT 334 (368)
T ss_dssp C-CC-C-SEEEEESCGGGBCHHHHHHHHHHHHHHSCT-TCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCC
T ss_pred C-CC-C-CEEEEechhhcCCHHHHHHHHHHHHHHcCC-CCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCC
Confidence 3 23 3 999999999999998877899999999999 99998873110 012234
Q ss_pred HHHHHHHHHhcCCcEEEeeec
Q 019282 304 GEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 304 ~~~l~~~L~~aGf~~v~~~~~ 324 (343)
.+++.++++++||+.++....
T Consensus 335 ~~e~~~ll~~AGF~~v~~~~~ 355 (368)
T 3reo_A 335 EKEFQALAMASGFRGFKVASC 355 (368)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHCCCeeeEEEEe
Confidence 899999999999999886654
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.47 E-value=5.1e-13 Score=118.40 Aligned_cols=145 Identities=13% Similarity=0.005 Sum_probs=98.2
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
.+.+...+...+.+.++.+|||||||+|.++..+++. ... ++++|.++.+.+.++++.+ .+.. .++.++.++..
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~--~~~--v~~vD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~ 114 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA--GGR--AITIEPRADRIENIQKNIDTYGLS-PRMRAVQGTAP 114 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT--TCE--EEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCTT
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc--CCE--EEEEeCCHHHHHHHHHHHHHcCCC-CCEEEEeCchh
Confidence 3455556666778889999999999999999999985 334 4455555555555554433 3332 25667776544
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
+.. .....||+|++...+ + .. +++++.++||| ||++++..... -...++.+.+++.|+++......
T Consensus 115 ~~~--~~~~~~D~v~~~~~~----~--~~-~l~~~~~~Lkp-gG~lv~~~~~~----~~~~~~~~~l~~~g~~i~~i~~~ 180 (204)
T 3njr_A 115 AAL--ADLPLPEAVFIGGGG----S--QA-LYDRLWEWLAP-GTRIVANAVTL----ESETLLTQLHARHGGQLLRIDIA 180 (204)
T ss_dssp GGG--TTSCCCSEEEECSCC----C--HH-HHHHHHHHSCT-TCEEEEEECSH----HHHHHHHHHHHHHCSEEEEEEEE
T ss_pred hhc--ccCCCCCEEEECCcc----c--HH-HHHHHHHhcCC-CcEEEEEecCc----ccHHHHHHHHHhCCCcEEEEEee
Confidence 422 223579999987644 1 23 89999999999 99999875211 12567788899999998887655
Q ss_pred ccccc
Q 019282 325 DSLLF 329 (343)
Q Consensus 325 ~~l~~ 329 (343)
...+.
T Consensus 181 ~~~~~ 185 (204)
T 3njr_A 181 QAEPL 185 (204)
T ss_dssp EEEEE
T ss_pred ccccc
Confidence 44333
No 88
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.46 E-value=4.8e-13 Score=117.14 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=91.5
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
++++ +|||||||+|.++..+++. +..++++|.++.+.+.+++... .+. ++.+..++..+++ + .+++||+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~-~-~~~~fD~ 97 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL----GYEVTAVDQSSVGLAKAKQLAQEKGV---KITTVQSNLADFD-I-VADAWEG 97 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT----TCEEEEECSSHHHHHHHHHHHHHHTC---CEEEECCBTTTBS-C-CTTTCSE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC----CCeEEEEECCHHHHHHHHHHHHhcCC---ceEEEEcChhhcC-C-CcCCccE
Confidence 4566 9999999999999998873 3456666666666666554432 222 4555655433332 2 3578999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc------------cccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK------------FCSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~------------~~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
|+++ +.|++......+++++.++||| ||.+++..... ....++++++.++++ ||+++.....
T Consensus 98 v~~~--~~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 98 IVSI--FCHLPSSLRQQLYPKVYQGLKP-GGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp EEEE--CCCCCHHHHHHHHHHHHTTCCS-SEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred EEEE--hhcCCHHHHHHHHHHHHHhcCC-CcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEE
Confidence 9995 4466655666799999999999 99999874211 112345999999998 9999886653
No 89
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.45 E-value=1.6e-12 Score=115.41 Aligned_cols=149 Identities=15% Similarity=0.124 Sum_probs=98.9
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
+++.+|||||||+|.++..+++..+...++++|+++.....+ +++.. .+. .++.++.++..++.+...+++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a--~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYA--LDKVLEVGV--PNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHH--HHHHHHHCC--SSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHH--HHHHHHcCC--CCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 357799999999999999999987766666666666555444 33322 233 3567777765554432235789999
Q ss_pred EEccccccCCch------HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeee--c----cc
Q 019282 259 YASAVFLHMPDK------LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKT--H----DS 326 (343)
Q Consensus 259 vs~~v~~hl~~~------~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~--~----~~ 326 (343)
+++....+.... ....+++++.++||| ||.+++....... .+.+.+.++++||+.+.... + ..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~d~~~~~~~~ 190 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPE-NGEIHFKTDNRGL----FEYSLVSFSQYGMKLNGVWLDLHASDFEG 190 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCT-TCEEEEEESCHHH----HHHHHHHHHHHTCEEEEEESSGGGSCCCC
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCC-CcEEEEEeCCHHH----HHHHHHHHHHCCCeeeeccccccccCCCC
Confidence 998655332211 113489999999999 9999987532111 35677788999999876542 1 12
Q ss_pred cccchhHHhhh
Q 019282 327 LLFNHYEIWFE 337 (343)
Q Consensus 327 l~~~~~e~w~~ 337 (343)
.....||.++.
T Consensus 191 ~~~t~~e~~~~ 201 (214)
T 1yzh_A 191 NVMTEYEQKFS 201 (214)
T ss_dssp CCCCHHHHHTG
T ss_pred CCCcHHHHHHH
Confidence 23456776654
No 90
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1e-12 Score=122.62 Aligned_cols=118 Identities=19% Similarity=0.171 Sum_probs=82.4
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhHHHHHHHHhcccCC-CCCCCcEEEecccC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELSLMAAFRYELPSQG-LLHKRPIIVRGEDM 244 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~~~~a~a~~~~~~~-~~~~~~~~~~~~~~ 244 (343)
..+++.+... ...++.+|||||||+|.++..+++.+ +...++++|+++ .+.+.++++.... ....++.++.++..
T Consensus 23 ~~~~~~l~~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 23 SDFYKMIDEY-HDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSA--TMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp HHHHHHHHHH-CCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCH--HHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred HHHHHHHHHH-hcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCH--HHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 3456666654 34678899999999999999999865 445555555554 5555445433321 12336777776555
Q ss_pred CcCCCCC-----CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEE
Q 019282 245 DFTKFGS-----GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 245 dl~~~~~-----~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
+++ +.. .++||+|++..++||+ +... ++++++++||| ||.+++
T Consensus 100 ~~~-~~~~~~~~~~~fD~V~~~~~l~~~-~~~~--~l~~~~~~Lkp-gG~l~i 147 (299)
T 3g5t_A 100 DFK-FLGADSVDKQKIDMITAVECAHWF-DFEK--FQRSAYANLRK-DGTIAI 147 (299)
T ss_dssp CCG-GGCTTTTTSSCEEEEEEESCGGGS-CHHH--HHHHHHHHEEE-EEEEEE
T ss_pred hCC-ccccccccCCCeeEEeHhhHHHHh-CHHH--HHHHHHHhcCC-CcEEEE
Confidence 443 211 2789999999999999 6544 99999999999 999987
No 91
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.45 E-value=2e-12 Score=124.70 Aligned_cols=140 Identities=11% Similarity=0.031 Sum_probs=100.9
Q ss_pred HHHHHHHhcC-CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 169 VFEFLAEASH-ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 169 ~~~~l~~~~~-l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
....+.+... +.+..+|||||||+|.++..+++.++...++++|+ +.+.+.+++ ..++.++.++..+
T Consensus 188 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~-------~~~v~~~~~D~~~-- 255 (364)
T 3p9c_A 188 ITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL---PHVISEAPQ-------FPGVTHVGGDMFK-- 255 (364)
T ss_dssp HHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCC-------CTTEEEEECCTTT--
T ss_pred HHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC---HHHHHhhhh-------cCCeEEEeCCcCC--
Confidence 3444555555 77788999999999999999999887766555555 334432221 1366777663332
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-------------------------cccCC
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-------------------------FCSRL 302 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-------------------------~~~~~ 302 (343)
.+ +. . |+|++..++|+++++....+|++++++||| ||+++|.+... ....+
T Consensus 256 ~~-p~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~r 331 (364)
T 3p9c_A 256 EV-PS-G-DTILMKWILHDWSDQHCATLLKNCYDALPA-HGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRER 331 (364)
T ss_dssp CC-CC-C-SEEEEESCGGGSCHHHHHHHHHHHHHHSCT-TCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCC
T ss_pred CC-CC-C-CEEEehHHhccCCHHHHHHHHHHHHHHcCC-CCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccC
Confidence 23 23 3 999999999999998877899999999999 99998863110 01123
Q ss_pred CHHHHHHHHHhcCCcEEEeeec
Q 019282 303 GGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 303 ~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
+.++|.++++++||+.++....
T Consensus 332 t~~e~~~ll~~AGF~~v~~~~~ 353 (364)
T 3p9c_A 332 YEREFQALARGAGFTGVKSTYI 353 (364)
T ss_dssp BHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHHCCCceEEEEEc
Confidence 3899999999999999886643
No 92
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.45 E-value=2.3e-13 Score=119.51 Aligned_cols=137 Identities=15% Similarity=0.199 Sum_probs=90.5
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
..+++.+|||+|||+|..+..++... +..++++|.++.+.+.+++...... .++.+..++..+++ + .+++||+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~-~-~~~~fD~ 92 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVED---GYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLP-F-KDESMSF 92 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHHT---TCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCC-S-CTTCEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHhC---CCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCC-C-CCCceeE
Confidence 45678899999999999854444332 2344455555555554444322111 13455555433332 2 3578999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc---------------c----------ccCCCHHHHHHHHH
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK---------------F----------CSRLGGEECTKRLT 312 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~---------------~----------~~~~~~~~l~~~L~ 312 (343)
|++..+++|++......++++++++||| ||++++..... + ...++.+++.+.+.
T Consensus 93 v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 171 (209)
T 2p8j_A 93 VYSYGTIFHMRKNDVKEAIDEIKRVLKP-GGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFK 171 (209)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTT
T ss_pred EEEcChHHhCCHHHHHHHHHHHHHHcCC-CcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHh
Confidence 9999999999766667799999999999 99999873110 0 01234888999999
Q ss_pred hcCCcEEEee
Q 019282 313 SLGLEYIGKK 322 (343)
Q Consensus 313 ~aGf~~v~~~ 322 (343)
++||......
T Consensus 172 ~~g~~~~~~~ 181 (209)
T 2p8j_A 172 DMKVLFKEDR 181 (209)
T ss_dssp TSEEEEEEEE
T ss_pred hcCceeeeee
Confidence 9998776544
No 93
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.44 E-value=1.7e-13 Score=123.50 Aligned_cols=143 Identities=14% Similarity=0.070 Sum_probs=87.8
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
.+.+.+.... ..++.+|||||||+|.++..+++.. .. .++++|.++.+.+.++++.... ..++.++.++..++.
T Consensus 48 ~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~-~~--~v~gvD~s~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~ 121 (236)
T 1zx0_A 48 PYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAP-ID--EHWIIECNDGVFQRLRDWAPRQ--THKVIPLKGLWEDVA 121 (236)
T ss_dssp HHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSC-EE--EEEEEECCHHHHHHHHHHGGGC--SSEEEEEESCHHHHG
T ss_pred HHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcC-CC--eEEEEcCCHHHHHHHHHHHHhc--CCCeEEEecCHHHhh
Confidence 3444444432 4678899999999999999997632 12 4555555556666555543321 125666666444441
Q ss_pred -CCCCCCceeEEEE-cccc--ccCCchHHHHHHHHHHhccCCCCcEEEEEecccc----ccCCC------HHHHHHHHHh
Q 019282 248 -KFGSGVVYDLIYA-SAVF--LHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF----CSRLG------GEECTKRLTS 313 (343)
Q Consensus 248 -~~~~~~~fDlIvs-~~v~--~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~----~~~~~------~~~l~~~L~~ 313 (343)
.+ .+++||+|++ ...+ +.........++++++++||| ||++++...... ...+. .+.....|.+
T Consensus 122 ~~~-~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 199 (236)
T 1zx0_A 122 PTL-PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP-GGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLE 199 (236)
T ss_dssp GGS-CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE-EEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHH
T ss_pred ccc-CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCC-CeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHH
Confidence 13 3579999999 4443 222223334579999999999 999987632111 11111 3555678899
Q ss_pred cCCcE
Q 019282 314 LGLEY 318 (343)
Q Consensus 314 aGf~~ 318 (343)
+||+.
T Consensus 200 aGF~~ 204 (236)
T 1zx0_A 200 AGFRR 204 (236)
T ss_dssp TTCCG
T ss_pred CCCCC
Confidence 99984
No 94
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.44 E-value=3.3e-12 Score=112.27 Aligned_cols=136 Identities=12% Similarity=0.047 Sum_probs=95.9
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
.+++...+...+.+.++.+|||||||+|.++..+++..+...++++|+++.....+ +++.. .+. .++.++.++..
T Consensus 25 ~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a--~~~~~~~~~--~~v~~~~~d~~ 100 (204)
T 3e05_A 25 KQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFI--RDNLKKFVA--RNVTLVEAFAP 100 (204)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHH--HHHHHHHTC--TTEEEEECCTT
T ss_pred hHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHH--HHHHHHhCC--CcEEEEeCChh
Confidence 34555667777888999999999999999999999987656666666666554444 43322 233 35666665433
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCc
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLE 317 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~ 317 (343)
+.. ...+.||+|++...++ + ...+++++.++||| ||++++..... ...+++.+.++++||.
T Consensus 101 ~~~--~~~~~~D~i~~~~~~~---~--~~~~l~~~~~~Lkp-gG~l~~~~~~~----~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 101 EGL--DDLPDPDRVFIGGSGG---M--LEEIIDAVDRRLKS-EGVIVLNAVTL----DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp TTC--TTSCCCSEEEESCCTT---C--HHHHHHHHHHHCCT-TCEEEEEECBH----HHHHHHHHHHHHTTCE
T ss_pred hhh--hcCCCCCEEEECCCCc---C--HHHHHHHHHHhcCC-CeEEEEEeccc----ccHHHHHHHHHHCCCc
Confidence 222 1236799999988775 2 23489999999999 99999874211 1267788899999983
No 95
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=1.1e-12 Score=118.30 Aligned_cols=135 Identities=11% Similarity=0.069 Sum_probs=92.9
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC---CCCc
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG---SGVV 254 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~---~~~~ 254 (343)
.+.++.+|||||||+|.++..+++... .++++|+++ .+.+.++++. ...++.++.++..++.... ....
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~--~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~ 124 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSK--SALEIAAKEN----TAANISYRLLDGLVPEQAAQIHSEIG 124 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCH--HHHHHHHHHS----CCTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCH--HHHHHHHHhC----cccCceEEECcccccccccccccccC
Confidence 467888999999999999999998654 455555555 4454444432 1225666665433322100 1124
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc----------------------------ccCCCHHH
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF----------------------------CSRLGGEE 306 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~----------------------------~~~~~~~~ 306 (343)
||+|++..++||+++.....++++++++||| ||++++...... ...++.++
T Consensus 125 ~d~v~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGK-QGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAED 203 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTT-TCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHH
T ss_pred ccEEEEcchhhcCCHHHHHHHHHHHHHHcCC-CCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHH
Confidence 9999999999999976666799999999999 999877631110 01234788
Q ss_pred HHHHHHhcCCcEEEeee
Q 019282 307 CTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 307 l~~~L~~aGf~~v~~~~ 323 (343)
+.+.+ +||+++....
T Consensus 204 ~~~~~--aGf~~~~~~~ 218 (245)
T 3ggd_A 204 IELYF--PDFEILSQGE 218 (245)
T ss_dssp HHHHC--TTEEEEEEEC
T ss_pred HHHHh--CCCEEEeccc
Confidence 88888 9999987543
No 96
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.43 E-value=1.8e-12 Score=115.12 Aligned_cols=116 Identities=14% Similarity=0.216 Sum_probs=77.7
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
+.+.+.+.+ .++++.+|||||||+|.++..+++..+ .++++|+++ .+.+.+++...... .++.++.++..++
T Consensus 26 ~~~~~~l~~--~~~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~--~~~~~a~~~~~~~~--~~~~~~~~d~~~~ 97 (227)
T 1ve3_A 26 ETLEPLLMK--YMKKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISE--DMIRKAREYAKSRE--SNVEFIVGDARKL 97 (227)
T ss_dssp HHHHHHHHH--SCCSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCH--HHHHHHHHHHHHTT--CCCEEEECCTTSC
T ss_pred HHHHHHHHH--hcCCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCH--HHHHHHHHHHHhcC--CCceEEECchhcC
Confidence 334555543 345588999999999999999988543 455555554 44444444322111 2566666644333
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+ + .+++||+|++..++++........++++++++||| ||++++.
T Consensus 98 ~-~-~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~-gG~l~~~ 141 (227)
T 1ve3_A 98 S-F-EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKP-SGKFIMY 141 (227)
T ss_dssp C-S-CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEE-EEEEEEE
T ss_pred C-C-CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCC-CcEEEEE
Confidence 2 2 35689999999995555444455699999999999 9999886
No 97
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.43 E-value=1.6e-12 Score=115.82 Aligned_cols=145 Identities=14% Similarity=0.050 Sum_probs=87.0
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC-CCCCCce
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK-FGSGVVY 255 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~-~~~~~~f 255 (343)
+.++++.+|||||||+|..+..+++..+.. .++++|.++.+.+...+.... . .++.++.++..+... ....++|
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~--~V~gvD~s~~~l~~~~~~a~~-~--~~v~~~~~d~~~~~~~~~~~~~f 127 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEG--IIYAVEYSAKPFEKLLELVRE-R--NNIIPLLFDASKPWKYSGIVEKV 127 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTS--EEEEECCCHHHHHHHHHHHHH-C--SSEEEECSCTTCGGGTTTTCCCE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHhc-C--CCeEEEEcCCCCchhhcccccce
Confidence 356788999999999999999999876533 455555555433211111111 1 144555543333211 1124789
Q ss_pred eEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccc-cCCCHHHHH----HHHHhcCCcEEEeeeccccccc
Q 019282 256 DLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFC-SRLGGEECT----KRLTSLGLEYIGKKTHDSLLFN 330 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~-~~~~~~~l~----~~L~~aGf~~v~~~~~~~l~~~ 330 (343)
|+|++.. .++ .....++++++++||| ||++++....... ....++++. +.|+++ |++++.....++...
T Consensus 128 D~V~~~~-~~~---~~~~~~l~~~~r~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~p~~~~ 201 (210)
T 1nt2_A 128 DLIYQDI-AQK---NQIEILKANAEFFLKE-KGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMPYHRD 201 (210)
T ss_dssp EEEEECC-CST---THHHHHHHHHHHHEEE-EEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEECTTTCTT
T ss_pred eEEEEec-cCh---hHHHHHHHHHHHHhCC-CCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecCCCCCCC
Confidence 9999973 222 2233368999999999 9999988532211 122344442 337888 999987766554444
Q ss_pred hh
Q 019282 331 HY 332 (343)
Q Consensus 331 ~~ 332 (343)
||
T Consensus 202 h~ 203 (210)
T 1nt2_A 202 HI 203 (210)
T ss_dssp EE
T ss_pred cE
Confidence 43
No 98
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.42 E-value=2e-12 Score=113.90 Aligned_cols=117 Identities=20% Similarity=0.157 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIY 259 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIv 259 (343)
.++.+|||||||+|.++..+ + . ..++++|.++.+.+.+++.. .++.++.++..+++ + .+++||+|+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~-~-~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~-~-~~~~fD~v~ 100 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----P-Y-PQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALP-F-PGESFDVVL 100 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----C-C-SEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCC-S-CSSCEEEEE
T ss_pred CCCCeEEEECCCCCHhHHhC----C-C-CeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCC-C-CCCcEEEEE
Confidence 37889999999999998766 1 2 04555555556665555422 24555655433333 2 357899999
Q ss_pred EccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc--------------------cccCCCHHHHHHHHHhcC
Q 019282 260 ASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK--------------------FCSRLGGEECTKRLTSLG 315 (343)
Q Consensus 260 s~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~--------------------~~~~~~~~~l~~~L~~aG 315 (343)
+..+++|+++... +++++.++||| ||.+++..... ....++.+++.++|+ |
T Consensus 101 ~~~~l~~~~~~~~--~l~~~~~~L~p-gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 101 LFTTLEFVEDVER--VLLEARRVLRP-GGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EESCTTTCSCHHH--HHHHHHHHEEE-EEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred EcChhhhcCCHHH--HHHHHHHHcCC-CCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 9999999987765 99999999999 99999873211 122346899999888 7
No 99
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.42 E-value=8.9e-13 Score=115.92 Aligned_cols=137 Identities=15% Similarity=0.096 Sum_probs=94.0
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
.+.+.+.+... ++++.+|||||||+|.++..+++. +...++++|+++.. .+.++++.. .+. . ++.+..+
T Consensus 47 ~~~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~--~~~a~~~~~~~~~-~-~v~~~~~--- 116 (205)
T 3grz_A 47 TQLAMLGIERA--MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDES--MTAAEENAALNGI-Y-DIALQKT--- 116 (205)
T ss_dssp HHHHHHHHHHH--CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHH--HHHHHHHHHHTTC-C-CCEEEES---
T ss_pred HHHHHHHHHHh--ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHH--HHHHHHHHHHcCC-C-ceEEEec---
Confidence 44455555433 567889999999999999998873 33455566665544 444444333 233 2 2666665
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
|+.+. .+++||+|+++..++++ ..+++++.++||| ||++++..... ...+++.+.++++||+.+....
T Consensus 117 d~~~~-~~~~fD~i~~~~~~~~~-----~~~l~~~~~~L~~-gG~l~~~~~~~----~~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 117 SLLAD-VDGKFDLIVANILAEIL-----LDLIPQLDSHLNE-DGQVIFSGIDY----LQLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp STTTT-CCSCEEEEEEESCHHHH-----HHHGGGSGGGEEE-EEEEEEEEEEG----GGHHHHHHHHHHTTEEEEEEEE
T ss_pred ccccc-CCCCceEEEECCcHHHH-----HHHHHHHHHhcCC-CCEEEEEecCc----ccHHHHHHHHHHcCCceEEeec
Confidence 33333 25799999999888664 3489999999999 99999863211 1367889999999999887554
No 100
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.41 E-value=2.3e-12 Score=124.29 Aligned_cols=138 Identities=15% Similarity=0.062 Sum_probs=98.5
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 170 FEFLAEASH-ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 170 ~~~l~~~~~-l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
...+.+... ++++.+|||||||+|.++..+++.++.. .++++|. +.+.+.+++ . .++.++.+ |+.+
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~--~~~~~D~-~~~~~~a~~-----~--~~v~~~~~---d~~~ 263 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLI--KGINFDL-PQVIENAPP-----L--SGIEHVGG---DMFA 263 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEEC-HHHHTTCCC-----C--TTEEEEEC---CTTT
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCC--eEEEeCh-HHHHHhhhh-----c--CCCEEEeC---Cccc
Confidence 345555554 6778899999999999999999987655 4554454 344443321 1 24666665 3332
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec---cc-c--------------------ccCCCH
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN---IK-F--------------------CSRLGG 304 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~---~~-~--------------------~~~~~~ 304 (343)
+... ||+|++..++||++++....+|++++++||| ||++++... .. . ...++.
T Consensus 264 -~~~~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~ 340 (372)
T 1fp1_D 264 -SVPQ-GDAMILKAVCHNWSDEKCIEFLSNCHKALSP-NGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTE 340 (372)
T ss_dssp -CCCC-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEH
T ss_pred -CCCC-CCEEEEecccccCCHHHHHHHHHHHHHhcCC-CCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCH
Confidence 1223 9999999999999998866799999999999 999988731 00 0 111248
Q ss_pred HHHHHHHHhcCCcEEEeee
Q 019282 305 EECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 305 ~~l~~~L~~aGf~~v~~~~ 323 (343)
+++.++++++||++++...
T Consensus 341 ~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 341 KQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp HHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEE
Confidence 8999999999999987664
No 101
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.41 E-value=3.4e-13 Score=126.97 Aligned_cols=142 Identities=9% Similarity=-0.011 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCC--C--CcEEEeccc------CCcCC
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLH--K--RPIIVRGED------MDFTK 248 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~--~--~~~~~~~~~------~dl~~ 248 (343)
+++.+|||||||+|..+..++.. ....++++|.+..+.+.|+++.. .+... . .+.+...+. .++.+
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~---~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~ 123 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG---EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE 123 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred CCCCeEEEEecCCcHhHHHHHhc---CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc
Confidence 35789999999999876655542 22345555666666665555432 22110 0 022333211 11221
Q ss_pred CCCCCceeEEEEccccccC-CchHHHHHHHHHHhccCCCCcEEEEEec-----------------------cc-------
Q 019282 249 FGSGVVYDLIYASAVFLHM-PDKLVWVGLERLASKLRPYDGRIFVSHN-----------------------IK------- 297 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl-~~~~~~~~L~~l~r~LkP~GG~lvi~~~-----------------------~~------- 297 (343)
..++++||+|+|..++|++ .......+|++++++||| ||+++++.. ..
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lkp-GG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 202 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTAS-GGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKI 202 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEE-EEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEE
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccc
Confidence 1235799999999999876 223345799999999999 999988621 00
Q ss_pred -------ccc----------CCCHHHHHHHHHhcCCcEEEeeecc
Q 019282 298 -------FCS----------RLGGEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 298 -------~~~----------~~~~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
+.. -+.++++.++++++||+.+....+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~ 247 (302)
T 2vdw_A 203 ADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFA 247 (302)
T ss_dssp ETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHH
T ss_pred cccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChH
Confidence 000 0126889999999999999887654
No 102
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.40 E-value=9.7e-13 Score=117.89 Aligned_cols=133 Identities=20% Similarity=0.241 Sum_probs=88.5
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
++++.+|||||||+|.++..+++. +..++++|.++.+.+.++++ ..++.++.++..+...+..+++||+|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ----AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG----SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEE
Confidence 467889999999999999999885 33455555555666655543 12466666644222223226799999
Q ss_pred EEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeeeccc-cccchhHHh
Q 019282 259 YASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKTHDS-LLFNHYEIW 335 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~~~~-l~~~~~e~w 335 (343)
++.. +.. .++++++++||| ||.++... .....+++.+.++++||+.+....... ..++.++.|
T Consensus 116 ~~~~------~~~--~~l~~~~~~Lkp-gG~l~~~~-----~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~ 179 (226)
T 3m33_A 116 VSRR------GPT--SVILRLPELAAP-DAHFLYVG-----PRLNVPEVPERLAAVGWDIVAEDHVSVLAHAPTWEDW 179 (226)
T ss_dssp EEES------CCS--GGGGGHHHHEEE-EEEEEEEE-----SSSCCTHHHHHHHHTTCEEEEEEEEEEEEEECSHHHH
T ss_pred EeCC------CHH--HHHHHHHHHcCC-CcEEEEeC-----CcCCHHHHHHHHHHCCCeEEEEEeeeecccCcCHHHH
Confidence 9972 222 278999999999 99998221 223467889999999999887654322 334445544
No 103
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.40 E-value=1.9e-12 Score=116.43 Aligned_cols=147 Identities=16% Similarity=0.125 Sum_probs=92.0
Q ss_pred hcCCCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC-CCC
Q 019282 176 ASHITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG-SGV 253 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~-~~~ 253 (343)
...+.++.+|||+|||+|.++..+++.+ +...++++|+++ .+.+.+.+..... .++.++.++..+...++ .++
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~--~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSH--RSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCH--HHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCC
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCH--HHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCC
Confidence 3567888999999999999999999876 334455555544 3322222211111 25666666444321111 356
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc-ccCCC-----HHHHHHHHHhcCCcEEEeeecccc
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF-CSRLG-----GEECTKRLTSLGLEYIGKKTHDSL 327 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~-~~~~~-----~~~l~~~L~~aGf~~v~~~~~~~l 327 (343)
+||+|++... .......++.++.++||| ||++++...... ..... ..+ .++|+++||++++....+++
T Consensus 147 ~~D~V~~~~~----~~~~~~~~~~~~~~~Lkp-gG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~~~~~~~~ 220 (233)
T 2ipx_A 147 MVDVIFADVA----QPDQTRIVALNAHTFLRN-GGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQEQLTLEPY 220 (233)
T ss_dssp CEEEEEECCC----CTTHHHHHHHHHHHHEEE-EEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEEEEECTTT
T ss_pred cEEEEEEcCC----CccHHHHHHHHHHHHcCC-CeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEEEEecCCc
Confidence 8999999544 222223468899999999 999998743211 00111 223 47889999999987777777
Q ss_pred ccchhH
Q 019282 328 LFNHYE 333 (343)
Q Consensus 328 ~~~~~e 333 (343)
+..|+-
T Consensus 221 ~~~~~~ 226 (233)
T 2ipx_A 221 ERDHAV 226 (233)
T ss_dssp SSSEEE
T ss_pred cCCcEE
Confidence 666653
No 104
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.39 E-value=2e-12 Score=111.07 Aligned_cols=120 Identities=15% Similarity=0.078 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIY 259 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIv 259 (343)
.++.+|||+|||+|.++..+++.. .++++|.++.+.+. ..++.++.++..+ ...+++||+|+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~-----~v~gvD~s~~~~~~----------~~~~~~~~~d~~~---~~~~~~fD~i~ 83 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN-----TVVSTDLNIRALES----------HRGGNLVRADLLC---SINQESVDVVV 83 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS-----EEEEEESCHHHHHT----------CSSSCEEECSTTT---TBCGGGCSEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC-----cEEEEECCHHHHhc----------ccCCeEEECChhh---hcccCCCCEEE
Confidence 456799999999999999998743 56666666666553 1234556553333 22347999999
Q ss_pred EccccccCCch-------HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 260 ASAVFLHMPDK-------LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 260 s~~v~~hl~~~-------~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
++..+++.++. ....+++++.+.+ | ||.+++.... ....+++.+.++++||+.+....
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-p-gG~l~~~~~~----~~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-T-VGMLYLLVIE----ANRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-C-SSEEEEEEEG----GGCHHHHHHHHHHTTCEEEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhC-C-CCEEEEEEec----CCCHHHHHHHHHHCCCcEEEEEe
Confidence 99998865544 2334788999988 9 9999887521 12378899999999999876554
No 105
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.39 E-value=3.9e-12 Score=115.35 Aligned_cols=155 Identities=11% Similarity=0.051 Sum_probs=94.3
Q ss_pred hHHHHHHHHHhc---CCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHH--HHHHHhcccCCCCCCCcEEE
Q 019282 166 GRDVFEFLAEAS---HITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLM--AAFRYELPSQGLLHKRPIIV 239 (343)
Q Consensus 166 ~~~~~~~l~~~~---~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~--~a~a~~~~~~~~~~~~~~~~ 239 (343)
+......+...+ .++++.+|||+|||+|.++.++++... ...++++|+++.+.. ...+++ . .++.++
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~----r---~nv~~i 130 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR----R---PNIFPL 130 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH----C---TTEEEE
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh----c---CCeEEE
Confidence 334445554443 488999999999999999999998764 345566666655432 222221 1 246666
Q ss_pred ecccCCcCCC-CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc---c--cCCCHHHHHHHHHh
Q 019282 240 RGEDMDFTKF-GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF---C--SRLGGEECTKRLTS 313 (343)
Q Consensus 240 ~~~~~dl~~~-~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~---~--~~~~~~~l~~~L~~ 313 (343)
.++......+ ...++||+|++.... ++. ...++..+.+.||| ||+|++...... . ..-..++..+.|++
T Consensus 131 ~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~-~~il~~~~~~~Lkp-GG~lvisik~~~~d~t~~~~e~~~~~~~~L~~ 205 (232)
T 3id6_C 131 LADARFPQSYKSVVENVDVLYVDIAQ---PDQ-TDIAIYNAKFFLKV-NGDMLLVIKARSIDVTKDPKEIYKTEVEKLEN 205 (232)
T ss_dssp ECCTTCGGGTTTTCCCEEEEEECCCC---TTH-HHHHHHHHHHHEEE-EEEEEEEEC-------CCSSSSTTHHHHHHHH
T ss_pred EcccccchhhhccccceEEEEecCCC---hhH-HHHHHHHHHHhCCC-CeEEEEEEccCCcccCCCHHHHHHHHHHHHHH
Confidence 6644332211 124689999997544 222 22245566779999 999998732111 0 00012445567889
Q ss_pred cCCcEEEeeeccccccchh
Q 019282 314 LGLEYIGKKTHDSLLFNHY 332 (343)
Q Consensus 314 aGf~~v~~~~~~~l~~~~~ 332 (343)
+||++++.....++-.+|+
T Consensus 206 ~gf~~~~~~~l~p~~~~h~ 224 (232)
T 3id6_C 206 SNFETIQIINLDPYDKDHA 224 (232)
T ss_dssp TTEEEEEEEECTTTCSSCE
T ss_pred CCCEEEEEeccCCCcCceE
Confidence 9999998777666555554
No 106
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.39 E-value=1.2e-12 Score=114.16 Aligned_cols=145 Identities=11% Similarity=0.048 Sum_probs=89.6
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCce
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
..++++.+|||+|||+|.++..+++.++ ... ++++|.++.+.+.++++........++.++.++..++... .+++|
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~--v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~f 94 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGR--VFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY-IDCPV 94 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCE--EEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT-CCSCE
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCE--EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh-ccCCc
Confidence 3567889999999999999999998763 334 4455555555555554433221223567777655555433 35789
Q ss_pred eEEEEcccccc-------CCchHHHHHHHHHHhccCCCCcEEEEEeccccccCC-CHHHHHHHH---HhcCCcEEEeeec
Q 019282 256 DLIYASAVFLH-------MPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRL-GGEECTKRL---TSLGLEYIGKKTH 324 (343)
Q Consensus 256 DlIvs~~v~~h-------l~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~-~~~~l~~~L---~~aGf~~v~~~~~ 324 (343)
|+|++...+.. ........+++++.++||| ||++++.......... ..+.+.+++ ...+|++......
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~-gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~ 173 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVT-GGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFI 173 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEE-EEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEET
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcC-CCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEec
Confidence 99999865511 1112334589999999999 9999887422211111 133444444 3456877766554
Q ss_pred c
Q 019282 325 D 325 (343)
Q Consensus 325 ~ 325 (343)
+
T Consensus 174 ~ 174 (197)
T 3eey_A 174 N 174 (197)
T ss_dssp T
T ss_pred c
Confidence 3
No 107
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.38 E-value=3.5e-12 Score=116.81 Aligned_cols=142 Identities=11% Similarity=0.038 Sum_probs=94.9
Q ss_pred HHHhcCCC-CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCC
Q 019282 173 LAEASHIT-PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGS 251 (343)
Q Consensus 173 l~~~~~l~-~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~ 251 (343)
+.....++ ++.+|||+|||+|.++..+++..+. . ++++|.++.+.+.++++........++.++.++..++.....
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~--v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~ 116 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-K--IVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIP 116 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCC-E--EEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCC-c--EEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhc
Confidence 44446777 8899999999999999999886432 4 555555555555555544322223357777765554442223
Q ss_pred CCceeEEEEccccccC------------------CchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHh
Q 019282 252 GVVYDLIYASAVFLHM------------------PDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTS 313 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl------------------~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~ 313 (343)
.++||+|+++..+.+. .......+++.+.++||| ||++++... .....++...+++
T Consensus 117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~-----~~~~~~~~~~l~~ 190 (259)
T 3lpm_A 117 KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQ-GGKANFVHR-----PERLLDIIDIMRK 190 (259)
T ss_dssp TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEE-EEEEEEEEC-----TTTHHHHHHHHHH
T ss_pred cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccC-CcEEEEEEc-----HHHHHHHHHHHHH
Confidence 6799999998665433 112334689999999999 999998753 2236778888999
Q ss_pred cCCcEEEeee
Q 019282 314 LGLEYIGKKT 323 (343)
Q Consensus 314 aGf~~v~~~~ 323 (343)
.||.......
T Consensus 191 ~~~~~~~~~~ 200 (259)
T 3lpm_A 191 YRLEPKRIQF 200 (259)
T ss_dssp TTEEEEEEEE
T ss_pred CCCceEEEEE
Confidence 9998776553
No 108
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.38 E-value=2.7e-12 Score=114.41 Aligned_cols=132 Identities=11% Similarity=-0.000 Sum_probs=86.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLIY 259 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIv 259 (343)
++.+|||||||+|.++..+++..+...++++| .+..+.+.++++.. .+. .++.++.++..++.....++.||.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD--~s~~~l~~a~~~~~~~~~--~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIE--LFKSVIVTAVQKVKDSEA--QNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEEC--SCHHHHHHHHHHHHHSCC--SSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEE--echHHHHHHHHHHHHcCC--CCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 56799999999999999999877655555555 45455554444332 333 25677776555543222357899998
Q ss_pred EccccccCCch------HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEe
Q 019282 260 ASAVFLHMPDK------LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 260 s~~v~~hl~~~------~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~ 321 (343)
+.....+.... ....+++++.++||| ||.+++....... .+.+.+.++++||+.+..
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lkp-gG~l~~~td~~~~----~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGK-GGSIHFKTDNRGL----FEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTT-SCEEEEEESCHHH----HHHHHHHHHHHTCEEEEE
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCC-CCEEEEEeCCHHH----HHHHHHHHHHCCCccccc
Confidence 86544332211 023489999999999 9999987521111 345667788899987654
No 109
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.37 E-value=2.8e-12 Score=115.57 Aligned_cols=153 Identities=14% Similarity=0.092 Sum_probs=88.9
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChh-HHHHHH---HHhccc-CCCCCCCcEEEecccCCcCCCCCCC
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDEL-SLMAAF---RYELPS-QGLLHKRPIIVRGEDMDFTKFGSGV 253 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s-~~~~a~---a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~ 253 (343)
..++.+|||||||+|.++..+++..+ +..++++|.+ ..+.+. ++++.. .+. .++.+..++..+++.. ..+
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~--~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~--~~v~~~~~d~~~l~~~-~~d 96 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQ--NTFYIGIDPVKENLFDISKKIIKKPSKGGL--SNVVFVIAAAESLPFE-LKN 96 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCT--TEEEEEECSCCGGGHHHHHHHTSCGGGTCC--SSEEEECCBTTBCCGG-GTT
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHHHHHHHcCC--CCeEEEEcCHHHhhhh-ccC
Confidence 35678999999999999999986544 3455555655 334332 344433 233 2466776655555321 124
Q ss_pred ceeEEEEcccccc----CCchHHHHHHHHHHhccCCCCcEEEEEec--ccc---------ccCCC-----HHHHHHHHHh
Q 019282 254 VYDLIYASAVFLH----MPDKLVWVGLERLASKLRPYDGRIFVSHN--IKF---------CSRLG-----GEECTKRLTS 313 (343)
Q Consensus 254 ~fDlIvs~~v~~h----l~~~~~~~~L~~l~r~LkP~GG~lvi~~~--~~~---------~~~~~-----~~~l~~~L~~ 313 (343)
.+|.|+++....+ ... ....+|++++++||| ||++++... ..+ ...+. .+++.+.+++
T Consensus 97 ~v~~i~~~~~~~~~~~~~~~-~~~~~l~~~~r~Lkp-GG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 174 (225)
T 3p2e_A 97 IADSISILFPWGTLLEYVIK-PNRDILSNVADLAKK-EAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSN 174 (225)
T ss_dssp CEEEEEEESCCHHHHHHHHT-TCHHHHHHHHTTEEE-EEEEEEEECCCC--------------CCHHHHHSHHHHHHHHH
T ss_pred eEEEEEEeCCCcHHhhhhhc-chHHHHHHHHHhcCC-CcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHH
Confidence 5555555432211 100 012479999999999 999988321 100 01112 2248889999
Q ss_pred cCCcEEEeeeccccccchh-HHhhhh
Q 019282 314 LGLEYIGKKTHDSLLFNHY-EIWFEF 338 (343)
Q Consensus 314 aGf~~v~~~~~~~l~~~~~-e~w~~~ 338 (343)
+||+++.....+.-....| ..|...
T Consensus 175 aGf~v~~~~~~~~~~~~~~~~~w~~~ 200 (225)
T 3p2e_A 175 SGFRIDDVKELDNEYVKQFNSLWAKR 200 (225)
T ss_dssp HTCEEEEEEEECHHHHTTCCSHHHHH
T ss_pred cCCCeeeeeecCHHHHHHHHHHHhcc
Confidence 9999988877664333333 245544
No 110
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.37 E-value=5.6e-12 Score=111.45 Aligned_cols=115 Identities=17% Similarity=0.256 Sum_probs=83.3
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
...++.+|||||||+|.++..++ ..++++|+++. ++.+..++..+++ + .+++||+
T Consensus 64 ~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~-~-~~~~fD~ 118 (215)
T 2zfu_A 64 QRPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVP-L-EDESVDV 118 (215)
T ss_dssp TSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCS-C-CTTCEEE
T ss_pred ccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCC-C-CCCCEeE
Confidence 34677899999999999987662 46677777664 1223333333322 2 3578999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
|++..++|+ .+.. .++++++++|+| ||.+++..... .....+++.++++++||+++....
T Consensus 119 v~~~~~l~~-~~~~--~~l~~~~~~L~~-gG~l~i~~~~~--~~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 119 AVFCLSLMG-TNIR--DFLEEANRVLKP-GGLLKVAEVSS--RFEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp EEEESCCCS-SCHH--HHHHHHHHHEEE-EEEEEEEECGG--GCSCHHHHHHHHHHTTEEEEEEEC
T ss_pred EEEehhccc-cCHH--HHHHHHHHhCCC-CeEEEEEEcCC--CCCCHHHHHHHHHHCCCEEEEEec
Confidence 999999964 5544 499999999999 99999875322 122589999999999999887554
No 111
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.35 E-value=1e-11 Score=114.64 Aligned_cols=141 Identities=12% Similarity=0.136 Sum_probs=95.2
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
+.+.+.+.+.+. .++.+|||+|||+|..+..++...+...++++|+++ .+.+.++++.. .+. . ++.++.++..+
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~--~~l~~a~~n~~~~~~-~-~v~~~~~d~~~ 170 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMP--DAVSLAQRNAQHLAI-K-NIHILQSDWFS 170 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSH--HHHHHHHHHHHHHTC-C-SEEEECCSTTG
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHHHcCC-C-ceEEEEcchhh
Confidence 345666666555 567899999999999999999877655555555555 44444444332 232 2 46666653333
Q ss_pred cCCCCCCCceeEEEEcccc-------------ccCCc----------hHHHHHHHHHHhccCCCCcEEEEEeccccccCC
Q 019282 246 FTKFGSGVVYDLIYASAVF-------------LHMPD----------KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRL 302 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~-------------~hl~~----------~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~ 302 (343)
....++||+|+++..+ +|.|. .....+++++.++||| ||++++..+ ..
T Consensus 171 ---~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkp-gG~l~~~~~-----~~ 241 (276)
T 2b3t_A 171 ---ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVS-GGFLLLEHG-----WQ 241 (276)
T ss_dssp ---GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEE-EEEEEEECC-----SS
T ss_pred ---hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCC-CCEEEEEEC-----ch
Confidence 2225689999998433 33331 2335689999999999 999999753 22
Q ss_pred CHHHHHHHHHhcCCcEEEe
Q 019282 303 GGEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 303 ~~~~l~~~L~~aGf~~v~~ 321 (343)
..+++.+.++++||+.+..
T Consensus 242 ~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 242 QGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp CHHHHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHHHCCCcEEEE
Confidence 4788999999999986543
No 112
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.35 E-value=7.8e-12 Score=107.65 Aligned_cols=134 Identities=16% Similarity=0.202 Sum_probs=89.2
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl 246 (343)
...+.+.+.+...++.+|||+|||+|.++..+++. ...++++|+++.. .+.+++... .+..+.++.++.+ ++
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~--~~~a~~~~~~~~~~~~~~~~~~~---d~ 111 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRA--IKLAKENIKLNNLDNYDIRVVHS---DL 111 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHH--HHHHHHHHHHTTCTTSCEEEEEC---ST
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHH--HHHHHHHHHHcCCCccceEEEEC---ch
Confidence 34555666677778899999999999999999885 3455555555544 444444332 2332113666665 33
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhc
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSL 314 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~a 314 (343)
.+...++.||+|++...+++. ......+++++.++|+| ||.+++...... ...++.+.+++.
T Consensus 112 ~~~~~~~~~D~v~~~~~~~~~-~~~~~~~l~~~~~~L~~-gG~l~~~~~~~~----~~~~~~~~l~~~ 173 (194)
T 1dus_A 112 YENVKDRKYNKIITNPPIRAG-KEVLHRIIEEGKELLKD-NGEIWVVIQTKQ----GAKSLAKYMKDV 173 (194)
T ss_dssp TTTCTTSCEEEEEECCCSTTC-HHHHHHHHHHHHHHEEE-EEEEEEEEESTH----HHHHHHHHHHHH
T ss_pred hcccccCCceEEEECCCcccc-hhHHHHHHHHHHHHcCC-CCEEEEEECCCC----ChHHHHHHHHHH
Confidence 333346789999999888663 33445699999999999 999998854221 144567777776
No 113
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.34 E-value=5.8e-12 Score=108.28 Aligned_cols=137 Identities=18% Similarity=0.186 Sum_probs=91.9
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
..+.+.+.+.+.+.++.+|||+|||+|.++..+++.. ..++++|+++.. .+.+++... .+. ..++.+..++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~--~~~a~~~~~~~~~-~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEA--ISTTEMNLQRHGL-GDNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHH--HHHHHHHHHHTTC-CTTEEEEESCHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHH--HHHHHHHHHHcCC-CcceEEEecCHHH
Confidence 4455666666788899999999999999999998854 455555555544 444444322 222 1255566553222
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
. +...+.||+|++...++++ ..+++++.++|+| ||.+++..... ...+++.+.+++.||.+..
T Consensus 94 ~--~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~l~~-gG~l~~~~~~~----~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 94 A--LCKIPDIDIAVVGGSGGEL-----QEILRIIKDKLKP-GGRIIVTAILL----ETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp H--HTTSCCEEEEEESCCTTCH-----HHHHHHHHHTEEE-EEEEEEEECBH----HHHHHHHHHHHHTTCCCEE
T ss_pred h--cccCCCCCEEEECCchHHH-----HHHHHHHHHhcCC-CcEEEEEecCc----chHHHHHHHHHHCCCceEE
Confidence 1 1122589999999887654 3489999999999 99998875311 1256778889999995443
No 114
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.34 E-value=1.9e-12 Score=121.92 Aligned_cols=141 Identities=16% Similarity=0.132 Sum_probs=91.7
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcc---cCCCCCCCcEEEecccCCcCCCCCCCce
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELP---SQGLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~---~~~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
.+++.+|||||||+|.++..+++..+...++++|+|+.....+ ++.. ..+..+.++.++.++..++.....+++|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~f 170 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQS--KQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTY 170 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHH--HHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHH--HHHhHHhhcccCCCcEEEEECcHHHHHHhccCCce
Confidence 3567899999999999999999865556677777777655554 3322 1122334666776644433211025789
Q ss_pred eEEEEccccccCCchHH--HHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 256 DLIYASAVFLHMPDKLV--WVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~--~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
|+|++....++.+.... ..++++++++||| ||++++.....+........+.+.++++||..+...
T Consensus 171 DvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 171 DVVIIDTTDPAGPASKLFGEAFYKDVLRILKP-DGICCNQGESIWLDLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEEEEECC---------CCHHHHHHHHHHEEE-EEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred eEEEECCCCccccchhhhHHHHHHHHHHhcCC-CcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEE
Confidence 99999766654433221 3589999999999 999998754333222236778889999999977654
No 115
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.33 E-value=3.5e-12 Score=116.80 Aligned_cols=138 Identities=17% Similarity=0.200 Sum_probs=93.2
Q ss_pred cchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecc
Q 019282 164 AGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGE 242 (343)
Q Consensus 164 ~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~ 242 (343)
...+...+.+... +.++.+|||+|||+|.++..+++. .. .++++|+++.....+ +++.. .+. . +.+..++
T Consensus 105 ~tt~~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~-g~-~v~gvDi~~~~v~~a--~~n~~~~~~-~--v~~~~~d 175 (254)
T 2nxc_A 105 ETTRLALKALARH--LRPGDKVLDLGTGSGVLAIAAEKL-GG-KALGVDIDPMVLPQA--EANAKRNGV-R--PRFLEGS 175 (254)
T ss_dssp HHHHHHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHT-TC-EEEEEESCGGGHHHH--HHHHHHTTC-C--CEEEESC
T ss_pred HHHHHHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHh-CC-eEEEEECCHHHHHHH--HHHHHHcCC-c--EEEEECC
Confidence 3344455555543 567889999999999999998874 22 666777776665555 33322 222 1 4555542
Q ss_pred cCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 243 DMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 243 ~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
..+. + .+++||+|+++...++ ...++.++.++||| ||+++++.... ...+++.+.++++||+++...
T Consensus 176 ~~~~--~-~~~~fD~Vv~n~~~~~-----~~~~l~~~~~~Lkp-gG~lils~~~~----~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 176 LEAA--L-PFGPFDLLVANLYAEL-----HAALAPRYREALVP-GGRALLTGILK----DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp HHHH--G-GGCCEEEEEEECCHHH-----HHHHHHHHHHHEEE-EEEEEEEEEEG----GGHHHHHHHHHHTTCEEEEEE
T ss_pred hhhc--C-cCCCCCEEEECCcHHH-----HHHHHHHHHHHcCC-CCEEEEEeecc----CCHHHHHHHHHHCCCEEEEEe
Confidence 2221 2 2468999999766543 34589999999999 99999874211 137889999999999988765
Q ss_pred e
Q 019282 323 T 323 (343)
Q Consensus 323 ~ 323 (343)
.
T Consensus 243 ~ 243 (254)
T 2nxc_A 243 A 243 (254)
T ss_dssp E
T ss_pred c
Confidence 4
No 116
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.32 E-value=2.6e-11 Score=108.27 Aligned_cols=153 Identities=10% Similarity=0.099 Sum_probs=92.1
Q ss_pred HHHHHHHH---HhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecc
Q 019282 167 RDVFEFLA---EASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGE 242 (343)
Q Consensus 167 ~~~~~~l~---~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~ 242 (343)
......+. +.+.+.++.+|||+|||+|.++..+++.++ ...++++|+++ .+.+.+++..... .++.++.++
T Consensus 56 ~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~--~~~~~~~~~~~~~---~~v~~~~~d 130 (227)
T 1g8a_A 56 SKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP--RVLRELVPIVEER---RNIVPILGD 130 (227)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCH--HHHHHHHHHHSSC---TTEEEEECC
T ss_pred hhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCH--HHHHHHHHHHhcc---CCCEEEEcc
Confidence 34445552 334477889999999999999999998764 34455555555 4443333322221 356667664
Q ss_pred cCCcCCC-CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccccc-CCC-----HHHHHHHHHhcC
Q 019282 243 DMDFTKF-GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCS-RLG-----GEECTKRLTSLG 315 (343)
Q Consensus 243 ~~dl~~~-~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~-~~~-----~~~l~~~L~~aG 315 (343)
..+...+ ...++||+|++... .......++.++.++||| ||++++........ ... .+++.++ .++
T Consensus 131 ~~~~~~~~~~~~~~D~v~~~~~----~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~- 203 (227)
T 1g8a_A 131 ATKPEEYRALVPKVDVIFEDVA----QPTQAKILIDNAEVYLKR-GGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY- 203 (227)
T ss_dssp TTCGGGGTTTCCCEEEEEECCC----STTHHHHHHHHHHHHEEE-EEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-
T ss_pred CCCcchhhcccCCceEEEECCC----CHhHHHHHHHHHHHhcCC-CCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-
Confidence 4432111 12458999998654 122222359999999999 99998874322111 111 3556555 677
Q ss_pred CcEEEeeeccccccch
Q 019282 316 LEYIGKKTHDSLLFNH 331 (343)
Q Consensus 316 f~~v~~~~~~~l~~~~ 331 (343)
|+.++.....+....|
T Consensus 204 f~~~~~~~~~~~~~~~ 219 (227)
T 1g8a_A 204 FEVIERLNLEPYEKDH 219 (227)
T ss_dssp SEEEEEEECTTTSSSE
T ss_pred ceeeeEeccCcccCCC
Confidence 9988766554443334
No 117
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.31 E-value=1e-11 Score=112.28 Aligned_cols=133 Identities=14% Similarity=0.103 Sum_probs=87.5
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCC-CCCCce
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKF-GSGVVY 255 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~-~~~~~f 255 (343)
.++++.+|||||||+|..+..++...+...++++|++ +.+.+.+++... .+. . ++.++.++..++... ..+++|
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~-~-~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSL--NKRITFLEKLSEALQL-E-NTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESC--HHHHHHHHHHHHHHTC-S-SEEEEESCHHHHTTCTTTTTCE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHHHcCC-C-CEEEEeccHHHhcccccccCCc
Confidence 3457789999999999999999876554555555554 455554444332 233 2 466776654444311 124689
Q ss_pred eEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 256 DLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
|+|++..+ .+. ..+++.+.++||| ||.+++..+..... ..+++.+.+++.||+.+....
T Consensus 143 D~V~~~~~----~~~--~~~l~~~~~~Lkp-gG~l~~~~g~~~~~--~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 143 DIVTARAV----ARL--SVLSELCLPLVKK-NGLFVALKAASAEE--ELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp EEEEEECC----SCH--HHHHHHHGGGEEE-EEEEEEEECC-CHH--HHHHHHHHHHHTTEEEEEEEE
T ss_pred cEEEEecc----CCH--HHHHHHHHHhcCC-CCEEEEEeCCCchH--HHHHHHHHHHHcCCeEeEEEE
Confidence 99999763 333 3489999999999 99998875322111 134567788899999876553
No 118
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.30 E-value=1.2e-11 Score=112.32 Aligned_cols=138 Identities=13% Similarity=0.110 Sum_probs=94.4
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
......+.....+.++.+|||+|||+|.++..+++.+ +...++++ |.++.+.+.++++.. .+. .+++.+..++..
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~--D~~~~~~~~a~~~~~~~~~-~~~v~~~~~d~~ 155 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSY--EIREDFAKLAWENIKWAGF-DDRVTIKLKDIY 155 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEE--CSCHHHHHHHHHHHHHHTC-TTTEEEECSCGG
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEE--ecCHHHHHHHHHHHHHcCC-CCceEEEECchh
Confidence 4455567777889999999999999999999999874 34444455 444455555554433 233 224666665333
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcC--CcEEEee
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLG--LEYIGKK 322 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aG--f~~v~~~ 322 (343)
+...+++||+|++ +.+++.. +++++.++|+| ||++++...... ..+++.+.+++.| |..++..
T Consensus 156 ---~~~~~~~~D~v~~-----~~~~~~~--~l~~~~~~L~~-gG~l~~~~~~~~----~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 156 ---EGIEEENVDHVIL-----DLPQPER--VVEHAAKALKP-GGFFVAYTPCSN----QVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp ---GCCCCCSEEEEEE-----CSSCGGG--GHHHHHHHEEE-EEEEEEEESSHH----HHHHHHHHHHHTGGGBSCCEEE
T ss_pred ---hccCCCCcCEEEE-----CCCCHHH--HHHHHHHHcCC-CCEEEEEECCHH----HHHHHHHHHHHcCCCccccEEE
Confidence 2234568999998 3455544 89999999999 999988742110 1567788899999 8776543
No 119
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.30 E-value=1.5e-11 Score=115.21 Aligned_cols=105 Identities=12% Similarity=0.177 Sum_probs=75.2
Q ss_pred hcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCc
Q 019282 176 ASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVV 254 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~ 254 (343)
...++++.+|||||||+|.++..++....... ++++|.++.+.+.++++.+ .+. .++.++.++..+++ +++
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~--V~gIDis~~~l~~Ar~~~~~~gl--~~v~~v~gDa~~l~----d~~ 188 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMR--VNVVEIEPDIAELSRKVIEGLGV--DGVNVITGDETVID----GLE 188 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCE--EEEEESSHHHHHHHHHHHHHHTC--CSEEEEESCGGGGG----GCC
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCE--EEEEECCHHHHHHHHHHHHhcCC--CCeEEEECchhhCC----CCC
Confidence 47889999999999999987655444444444 5555555566665555443 354 47788887665543 578
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
||+|++... .++... ++++++++||| ||++++..
T Consensus 189 FDvV~~~a~---~~d~~~--~l~el~r~LkP-GG~Lvv~~ 222 (298)
T 3fpf_A 189 FDVLMVAAL---AEPKRR--VFRNIHRYVDT-ETRIIYRT 222 (298)
T ss_dssp CSEEEECTT---CSCHHH--HHHHHHHHCCT-TCEEEEEE
T ss_pred cCEEEECCC---ccCHHH--HHHHHHHHcCC-CcEEEEEc
Confidence 999998654 455544 99999999999 99999875
No 120
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.29 E-value=1e-11 Score=114.79 Aligned_cols=136 Identities=15% Similarity=0.147 Sum_probs=88.9
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC
Q 019282 171 EFLAEASHITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 171 ~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~ 249 (343)
+.+...+.+.++.+|||+|||+|.++..+++.+ +... ++++|.++.+.+.++++........++.+..++. .+.
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~--v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~---~~~ 174 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGT--LTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI---ADF 174 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSE--EEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT---TTC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCE--EEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch---hcc
Confidence 456666788899999999999999999999863 3344 4455555555555554433210122566665533 322
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
..+++||+|++ +++++.. +++++.++||| ||++++...... ..+++.+.++++||..++...
T Consensus 175 ~~~~~fD~Vi~-----~~~~~~~--~l~~~~~~Lkp-gG~l~i~~~~~~----~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 175 ISDQMYDAVIA-----DIPDPWN--HVQKIASMMKP-GSVATFYLPNFD----QSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp CCSCCEEEEEE-----CCSCGGG--SHHHHHHTEEE-EEEEEEEESSHH----HHHHHHHHSGGGTEEEEEEEE
T ss_pred CcCCCccEEEE-----cCcCHHH--HHHHHHHHcCC-CCEEEEEeCCHH----HHHHHHHHHHHCCCeEEEEEE
Confidence 23568999998 5565544 89999999999 999998763210 246677888899998876543
No 121
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.29 E-value=4.3e-12 Score=110.34 Aligned_cols=121 Identities=19% Similarity=0.176 Sum_probs=79.4
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
+.+++.+..... .++.+|||+|||+|.++..++.. +...++++|+++.. .+.++++.. .+. .++.++.++..+
T Consensus 31 ~~l~~~l~~~~~-~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~--~~~a~~~~~~~~~--~~v~~~~~d~~~ 104 (189)
T 3p9n_A 31 ESLFNIVTARRD-LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRS--AAVIARNIEALGL--SGATLRRGAVAA 104 (189)
T ss_dssp HHHHHHHHHHSC-CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHH--HHHHHHHHHHHTC--SCEEEEESCHHH
T ss_pred HHHHHHHHhccC-CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHH--HHHHHHHHHHcCC--CceEEEEccHHH
Confidence 344555543322 46789999999999999987763 33345566555544 444444332 333 356777765444
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHh--ccCCCCcEEEEEec
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLAS--KLRPYDGRIFVSHN 295 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r--~LkP~GG~lvi~~~ 295 (343)
+.....+++||+|+++..+++. .......++.+.+ +|+| ||.+++.+.
T Consensus 105 ~~~~~~~~~fD~i~~~~p~~~~-~~~~~~~l~~~~~~~~L~p-gG~l~~~~~ 154 (189)
T 3p9n_A 105 VVAAGTTSPVDLVLADPPYNVD-SADVDAILAALGTNGWTRE-GTVAVVERA 154 (189)
T ss_dssp HHHHCCSSCCSEEEECCCTTSC-HHHHHHHHHHHHHSSSCCT-TCEEEEEEE
T ss_pred HHhhccCCCccEEEECCCCCcc-hhhHHHHHHHHHhcCccCC-CeEEEEEec
Confidence 4311125789999999888665 2334458999999 9999 999999864
No 122
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.29 E-value=7.2e-12 Score=120.03 Aligned_cols=115 Identities=16% Similarity=0.229 Sum_probs=81.6
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~ 248 (343)
.+.+.+.+.+.++.+|||||||+|.++..+++. +...++++|+++ +...++++.+ .+. ..++.++.++..++
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~---~~~~a~~~~~~~~l-~~~v~~~~~d~~~~-- 111 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST---MAQHAEVLVKSNNL-TDRIVVIPGKVEEV-- 111 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST---HHHHHHHHHHHTTC-TTTEEEEESCTTTC--
T ss_pred HHHHHhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH---HHHHHHHHHHHcCC-CCcEEEEEcchhhC--
Confidence 345555566778899999999999999998874 334566666653 3344444333 333 23667776644333
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
...++||+|++..+++|+..+.....+.+++++||| ||.+++.
T Consensus 112 -~~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~li~~ 154 (348)
T 2y1w_A 112 -SLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKP-SGNMFPT 154 (348)
T ss_dssp -CCSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEE-EEEEESC
T ss_pred -CCCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCC-CeEEEEe
Confidence 334689999999999888776656688899999999 9999864
No 123
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.29 E-value=3.6e-11 Score=102.60 Aligned_cols=135 Identities=11% Similarity=0.139 Sum_probs=90.9
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
...+.+.+.+.+.+.++.+|||+|||+|.++..+++ +...++++|+++. +.+.++++.. .+. .++.++.++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~--~~~~a~~~~~~~~~--~~~~~~~~d~~ 93 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDG--AIEVTKQNLAKFNI--KNCQIIKGRAE 93 (183)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHH--HHHHHHHHHHHTTC--CSEEEEESCHH
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHH--HHHHHHHHHHHcCC--CcEEEEECCcc
Confidence 345666677777888889999999999999999988 4445555555554 4444444332 232 24566655333
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
+ ...++.||+|++..+ .+ ...+++++.++ | ||.+++..... ....++.+.++++||++...+
T Consensus 94 ~---~~~~~~~D~i~~~~~----~~--~~~~l~~~~~~--~-gG~l~~~~~~~----~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 94 D---VLDKLEFNKAFIGGT----KN--IEKIIEILDKK--K-INHIVANTIVL----ENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp H---HGGGCCCSEEEECSC----SC--HHHHHHHHHHT--T-CCEEEEEESCH----HHHHHHHHHHHHTTCEEEEEE
T ss_pred c---cccCCCCcEEEECCc----cc--HHHHHHHHhhC--C-CCEEEEEeccc----ccHHHHHHHHHHcCCeEEEEE
Confidence 2 113468999999887 22 23489999998 9 99999885311 125678889999998766543
No 124
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.29 E-value=1e-11 Score=109.30 Aligned_cols=113 Identities=19% Similarity=0.173 Sum_probs=80.7
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
...+...+.+.+.+.++.+|||||||+|.++..+++. ...++++|+++ .+.+.++++.. .+.. ++.+..++..
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~--~~~~~a~~~~~~~~~~--~v~~~~~d~~ 135 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIK--GLQWQARRRLKNLDLH--NVSTRHGDGW 135 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCH--HHHHHHHHHHHHTTCC--SEEEEESCGG
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCH--HHHHHHHHHHHHcCCC--ceEEEECCcc
Confidence 4456677777788899999999999999999999986 24455555555 44444444332 2332 4666665333
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
+.. ..+++||+|++..+++|+++ .+.++||| ||++++..+
T Consensus 136 ~~~--~~~~~~D~i~~~~~~~~~~~--------~~~~~L~p-gG~lv~~~~ 175 (210)
T 3lbf_A 136 QGW--QARAPFDAIIVTAAPPEIPT--------ALMTQLDE-GGILVLPVG 175 (210)
T ss_dssp GCC--GGGCCEEEEEESSBCSSCCT--------HHHHTEEE-EEEEEEEEC
T ss_pred cCC--ccCCCccEEEEccchhhhhH--------HHHHhccc-CcEEEEEEc
Confidence 322 23578999999999999886 47899999 999999864
No 125
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.29 E-value=3.2e-11 Score=112.82 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=86.2
Q ss_pred HHHHHHHhcCCC-CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEec-c--cC
Q 019282 169 VFEFLAEASHIT-PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRG-E--DM 244 (343)
Q Consensus 169 ~~~~l~~~~~l~-~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~-~--~~ 244 (343)
.+..+.+...+. ++.+|||||||||.++..+++. +...++++|++. .|.+.+.+. +.++..... + ..
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~--~mL~~a~r~------~~rv~~~~~~ni~~l 142 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGT--NQLVWKLRQ------DDRVRSMEQYNFRYA 142 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSS--SCSCHHHHT------CTTEEEECSCCGGGC
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCH--HHHHHHHHh------CcccceecccCceec
Confidence 444455555654 5679999999999999988874 333445555544 444432211 112222211 1 01
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccccc------CC-----------CHHHH
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCS------RL-----------GGEEC 307 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~------~~-----------~~~~l 307 (343)
...++ +..+||+|++..+|+++. .+|.+++++||| ||.+++.....|.. .. ..+++
T Consensus 143 ~~~~l-~~~~fD~v~~d~sf~sl~-----~vL~e~~rvLkp-GG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v 215 (291)
T 3hp7_A 143 EPVDF-TEGLPSFASIDVSFISLN-----LILPALAKILVD-GGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETV 215 (291)
T ss_dssp CGGGC-TTCCCSEEEECCSSSCGG-----GTHHHHHHHSCT-TCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHH
T ss_pred chhhC-CCCCCCEEEEEeeHhhHH-----HHHHHHHHHcCc-CCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHH
Confidence 11112 233599999998887762 289999999999 99998873322211 01 16778
Q ss_pred HHHHHhcCCcEEEeee
Q 019282 308 TKRLTSLGLEYIGKKT 323 (343)
Q Consensus 308 ~~~L~~aGf~~v~~~~ 323 (343)
.++++++||.+.....
T Consensus 216 ~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 216 TAFAVDYGFSVKGLDF 231 (291)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHCCCEEEEEEE
Confidence 8899999999877554
No 126
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.29 E-value=5.2e-12 Score=110.91 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLIY 259 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIv 259 (343)
++.+|||+|||+|..+..++...+...++++|+++... +.+++... .+. . ++.+..++ +.+....++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~--~~a~~~~~~~~~-~-~v~~~~~d---~~~~~~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV--RFLRQVQHELKL-E-NIEPVQSR---VEEFPSEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHH--HHHHHHHHHTTC-S-SEEEEECC---TTTSCCCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHH--HHHHHHHHHcCC-C-CeEEEecc---hhhCCccCCcCEEE
Confidence 47799999999999999999877666666666665444 43443322 232 2 35666553 33333457899999
Q ss_pred EccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 260 ASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 260 s~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
+..+ .+. ..+++.+.++|+| ||.+++..+. ...+++.+.+. ||+.+...
T Consensus 138 ~~~~----~~~--~~~l~~~~~~L~~-gG~l~~~~~~-----~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 138 SRAF----ASL--NDMVSWCHHLPGE-QGRFYALKGQ-----MPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp CSCS----SSH--HHHHHHHTTSEEE-EEEEEEEESS-----CCHHHHHTSCT--TEEEEEEE
T ss_pred Eecc----CCH--HHHHHHHHHhcCC-CcEEEEEeCC-----CchHHHHHHhc--CCceeeee
Confidence 8643 222 3489999999999 9999998642 23556665554 99887644
No 127
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=108.64 Aligned_cols=132 Identities=13% Similarity=0.155 Sum_probs=87.4
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
.+.+.+.. .+.++.+|||||||+|.++..+++... ..++++|+++.....+ ++.... ..++.+..++..+++
T Consensus 31 ~~~~~l~~--~~~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a--~~~~~~---~~~i~~~~~d~~~~~ 102 (215)
T 2pxx_A 31 SFRALLEP--ELRPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAM--QACYAH---VPQLRWETMDVRKLD 102 (215)
T ss_dssp HHHHHHGG--GCCTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHH--HHHTTT---CTTCEEEECCTTSCC
T ss_pred HHHHHHHH--hcCCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHH--HHhccc---CCCcEEEEcchhcCC
Confidence 34455543 347788999999999999999988532 2566666665544444 433221 125666666444432
Q ss_pred CCCCCCceeEEEEccccccCC-------------chHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhc
Q 019282 248 KFGSGVVYDLIYASAVFLHMP-------------DKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSL 314 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~-------------~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~a 314 (343)
+ .+++||+|++..+++++. ......+++++.++||| ||++++.... .+......+...
T Consensus 103 -~-~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~li~~~~~------~~~~~~~~~~~~ 173 (215)
T 2pxx_A 103 -F-PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVP-GGRFISMTSA------APHFRTRHYAQA 173 (215)
T ss_dssp -S-CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEE-EEEEEEEESC------CHHHHHHHHCCG
T ss_pred -C-CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcC-CCEEEEEeCC------CcHHHHHHHhcc
Confidence 2 357899999999998775 23445699999999999 9999887521 133344566667
Q ss_pred CC
Q 019282 315 GL 316 (343)
Q Consensus 315 Gf 316 (343)
|+
T Consensus 174 ~~ 175 (215)
T 2pxx_A 174 YY 175 (215)
T ss_dssp GG
T ss_pred cc
Confidence 76
No 128
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.28 E-value=4.6e-11 Score=110.83 Aligned_cols=138 Identities=13% Similarity=0.085 Sum_probs=92.7
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
.....+... ++++.+|||+|||+|.++..+++.... .++++|.++.+.+.++++...+...+++.++.++..++.
T Consensus 114 ~~~~~l~~~--~~~~~~VLDlgcG~G~~~~~la~~~~~---~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 114 KERVRMAKV--AKPDELVVDMFAGIGHLSLPIAVYGKA---KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp HHHHHHHHH--CCTTCEEEETTCTTTTTHHHHHHHTCC---EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred HHHHHHHHh--CCCCCEEEEecccCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc
Confidence 334444433 567899999999999999999986432 455556665666655554442222335667776554444
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc--cccCCCHHHHHHHHHhcCCcEEE
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK--FCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~--~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
.++.||+|++..... . ..++.++.++||| ||.+++..... .......+.+.+.++++||++..
T Consensus 189 ---~~~~fD~Vi~~~p~~----~--~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 189 ---GENIADRILMGYVVR----T--HEFIPKALSIAKD-GAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ---CCSCEEEEEECCCSS----G--GGGHHHHHHHEEE-EEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ---ccCCccEEEECCchh----H--HHHHHHHHHHCCC-CeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 367899999964421 1 2378999999999 99998864322 22223367888999999998765
No 129
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.28 E-value=2.6e-11 Score=115.88 Aligned_cols=131 Identities=13% Similarity=0.084 Sum_probs=92.8
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.+.++.+|||||||+|.++..+++.++...++++|+ +.+.+.+++ . .++.++.+ |+.+. .. .||+
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~-----~--~~v~~~~~---d~~~~-~p-~~D~ 249 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR---PQVVENLSG-----S--NNLTYVGG---DMFTS-IP-NADA 249 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCC-----B--TTEEEEEC---CTTTC-CC-CCSE
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC---HHHHhhccc-----C--CCcEEEec---cccCC-CC-CccE
Confidence 356678999999999999999999877655555554 444443322 1 23566655 33221 12 3999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCC--CcEEEEEecc---cc--------------------ccCCCHHHHHHHHH
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPY--DGRIFVSHNI---KF--------------------CSRLGGEECTKRLT 312 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~--GG~lvi~~~~---~~--------------------~~~~~~~~l~~~L~ 312 (343)
|++..++||++++....+|++++++|||. ||++++.... .. ...++.+++.++++
T Consensus 250 v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~ 329 (352)
T 1fp2_A 250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFI 329 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHH
T ss_pred EEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHH
Confidence 99999999999988667999999999983 6888776311 00 01134789999999
Q ss_pred hcCCcEEEeee
Q 019282 313 SLGLEYIGKKT 323 (343)
Q Consensus 313 ~aGf~~v~~~~ 323 (343)
++||+.++...
T Consensus 330 ~aGf~~~~~~~ 340 (352)
T 1fp2_A 330 EAGFQHYKISP 340 (352)
T ss_dssp HTTCCEEEEEE
T ss_pred HCCCCeeEEEe
Confidence 99999887654
No 130
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.27 E-value=3.3e-11 Score=111.73 Aligned_cols=144 Identities=11% Similarity=0.043 Sum_probs=93.7
Q ss_pred HHHHHHHHhcC-CCCCCeEEEEcCCc---CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc
Q 019282 168 DVFEFLAEASH-ITPNSHVLEIGCGT---LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED 243 (343)
Q Consensus 168 ~~~~~l~~~~~-l~~~~rVLDIGCGt---G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~ 243 (343)
..++.+.+.+. ..+..+|||||||+ |.++..+.+..+...++++|++ +.+.+.++++... ..++.++.++.
T Consensus 63 ~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~s--p~~l~~Ar~~~~~---~~~v~~~~~D~ 137 (274)
T 2qe6_A 63 KVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDID--PMVLTHGRALLAK---DPNTAVFTADV 137 (274)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESS--HHHHHHHHHHHTT---CTTEEEEECCT
T ss_pred HHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECC--hHHHHHHHHhcCC---CCCeEEEEeeC
Confidence 34444443333 23447999999999 9888777665555555555554 5555555544321 23566776644
Q ss_pred CCcC----------CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc---------------
Q 019282 244 MDFT----------KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF--------------- 298 (343)
Q Consensus 244 ~dl~----------~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~--------------- 298 (343)
.+.. .++ .++||+|++..++||+++.....+|++++++|+| ||+|++.+...-
T Consensus 138 ~~~~~~~~~~~~~~~~d-~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~p-GG~l~i~~~~~~~~~~~~~~~~~~~~~ 215 (274)
T 2qe6_A 138 RDPEYILNHPDVRRMID-FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAP-GSYLFMTSLVDTGLPAQQKLARITREN 215 (274)
T ss_dssp TCHHHHHHSHHHHHHCC-TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCT-TCEEEEEEEBCSSCHHHHHHHHHHHHH
T ss_pred CCchhhhccchhhccCC-CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCC-CcEEEEEEecCcchHHHHHHHHHHHhc
Confidence 3321 121 2489999999999999986566699999999999 999998853210
Q ss_pred ---ccCCCHHHHHHHHHhcCCcEEE
Q 019282 299 ---CSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 299 ---~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
...++.+++.+++ .||++++
T Consensus 216 ~~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 216 LGEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp HSCCCCBCHHHHHHTT--TTCEECT
T ss_pred CCCCccCCHHHHHHHh--CCCeEcc
Confidence 0112477888777 5887665
No 131
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.27 E-value=1.7e-11 Score=111.93 Aligned_cols=108 Identities=20% Similarity=0.273 Sum_probs=73.3
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
+.+.+.... +++.+|||||||+|.++..+++. +..++++|.++.+.+.+++... . . ++.++..+++
T Consensus 44 ~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~----~-~--~~~~d~~~~~- 109 (260)
T 2avn_A 44 IGSFLEEYL--KNPCRVLDLGGGTGKWSLFLQER----GFEVVLVDPSKEMLEVAREKGV----K-N--VVEAKAEDLP- 109 (260)
T ss_dssp HHHHHHHHC--CSCCEEEEETCTTCHHHHHHHTT----TCEEEEEESCHHHHHHHHHHTC----S-C--EEECCTTSCC-
T ss_pred HHHHHHHhc--CCCCeEEEeCCCcCHHHHHHHHc----CCeEEEEeCCHHHHHHHHhhcC----C-C--EEECcHHHCC-
Confidence 344444433 37789999999999999999874 3345555555555555554321 1 2 4444333333
Q ss_pred CCCCCceeEEEEccccccC-CchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 249 FGSGVVYDLIYASAVFLHM-PDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl-~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
+ .+++||+|++..+++|+ ++. ..+|++++++||| ||.+++..
T Consensus 110 ~-~~~~fD~v~~~~~~~~~~~~~--~~~l~~~~~~Lkp-gG~l~~~~ 152 (260)
T 2avn_A 110 F-PSGAFEAVLALGDVLSYVENK--DKAFSEIRRVLVP-DGLLIATV 152 (260)
T ss_dssp S-CTTCEEEEEECSSHHHHCSCH--HHHHHHHHHHEEE-EEEEEEEE
T ss_pred C-CCCCEEEEEEcchhhhccccH--HHHHHHHHHHcCC-CeEEEEEe
Confidence 2 36789999999877776 553 4599999999999 99999863
No 132
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.27 E-value=2.1e-12 Score=113.26 Aligned_cols=142 Identities=8% Similarity=0.006 Sum_probs=82.7
Q ss_pred HHHHHHHHHhcCC-CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 167 RDVFEFLAEASHI-TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 167 ~~~~~~l~~~~~l-~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
+.+.+.+.+.+.. .++.+|||+|||+|.++..+++..+...++++|+++. +.+.++++.. .+. ++.++.++..
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~--~~~~a~~~~~~~~~---~~~~~~~d~~ 89 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMD--ALAVARRNAERFGA---VVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHH--HHHHHHHHHHHhCC---ceEEEEcchH
Confidence 3455555555544 7788999999999999999999765555556655554 4444443322 111 3333433222
Q ss_pred CcCCCCCC-----CceeEEEEccccccCC------chHH------------------HHHHHHHHhccCCCCcE-EEEEe
Q 019282 245 DFTKFGSG-----VVYDLIYASAVFLHMP------DKLV------------------WVGLERLASKLRPYDGR-IFVSH 294 (343)
Q Consensus 245 dl~~~~~~-----~~fDlIvs~~v~~hl~------~~~~------------------~~~L~~l~r~LkP~GG~-lvi~~ 294 (343)
+ ...+ ++||+|+++..+++.. .... ..++++++++||| ||+ +++..
T Consensus 90 ~---~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~ 165 (215)
T 4dzr_A 90 E---WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR-GRAGVFLEV 165 (215)
T ss_dssp H---HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCS-SSEEEEEEC
T ss_pred h---hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC-CCeEEEEEE
Confidence 2 1122 7899999975554322 2111 4588999999999 999 55554
Q ss_pred ccccccCCCHHHHHHHHH--hcCCcEEEee
Q 019282 295 NIKFCSRLGGEECTKRLT--SLGLEYIGKK 322 (343)
Q Consensus 295 ~~~~~~~~~~~~l~~~L~--~aGf~~v~~~ 322 (343)
. ....+.+.+.++ ++||..+...
T Consensus 166 ~-----~~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 166 G-----HNQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp T-----TSCHHHHHHHTGGGGGGTEECCEE
T ss_pred C-----CccHHHHHHHHHHhhcCCceEEEE
Confidence 2 223778888999 9999766533
No 133
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.26 E-value=5e-11 Score=115.73 Aligned_cols=144 Identities=13% Similarity=0.111 Sum_probs=91.7
Q ss_pred hHHHHHHHHHhc--CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecc
Q 019282 166 GRDVFEFLAEAS--HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGE 242 (343)
Q Consensus 166 ~~~~~~~l~~~~--~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~ 242 (343)
.+.+.+.+.+.. ...++.+|||+|||+|.++..+++. +..++++|.+..+.+.++++.. .+. .+.++.++
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~----g~~V~gvDis~~al~~A~~n~~~~~~---~v~~~~~D 288 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM----GAEVVGVEDDLASVLSLQKGLEANAL---KAQALHSD 288 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT----TCEEEEEESBHHHHHHHHHHHHHTTC---CCEEEECS
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCC---CeEEEEcc
Confidence 345566665443 2346789999999999999999984 2344444555555555554433 222 25566554
Q ss_pred cCCcCCCCCCCceeEEEEcccccc---CCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCC-HHHHHHHH------H
Q 019282 243 DMDFTKFGSGVVYDLIYASAVFLH---MPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLG-GEECTKRL------T 312 (343)
Q Consensus 243 ~~dl~~~~~~~~fDlIvs~~v~~h---l~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~-~~~l~~~L------~ 312 (343)
..+.. ..+++||+|+++..+|+ ........+++++.++||| ||.+++..+... . ...+.+.+ +
T Consensus 289 ~~~~~--~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~Lkp-GG~l~iv~n~~l----~~~~~l~~~f~~v~~l~ 361 (381)
T 3dmg_A 289 VDEAL--TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRP-GGVFFLVSNPFL----KYEPLLEEKFGAFQTLK 361 (381)
T ss_dssp TTTTS--CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEE-EEEEEEEECTTS----CHHHHHHHHHSCCEEEE
T ss_pred hhhcc--ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCc-CcEEEEEEcCCC----ChHHHHHHhhccEEEEe
Confidence 33332 12479999999999987 3345556699999999999 999998753221 1 22233322 4
Q ss_pred hcCCcEEEeee
Q 019282 313 SLGLEYIGKKT 323 (343)
Q Consensus 313 ~aGf~~v~~~~ 323 (343)
+.||+++....
T Consensus 362 ~~gF~Vl~a~~ 372 (381)
T 3dmg_A 362 VAEYKVLFAEK 372 (381)
T ss_dssp ESSSEEEEEEC
T ss_pred CCCEEEEEEEE
Confidence 56777776543
No 134
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.26 E-value=1.2e-11 Score=108.52 Aligned_cols=144 Identities=13% Similarity=0.069 Sum_probs=89.7
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
-+.+++.+...+ ++..+|||||||+|-++..++...+...++++|++.. +.+.++++.. .|... ++.+.
T Consensus 36 ld~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~--~leiar~~~~~~g~~~-~v~~~----- 105 (200)
T 3fzg_A 36 LNDFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRA--EIAFLSSIIGKLKTTI-KYRFL----- 105 (200)
T ss_dssp HHHHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHH--HHHHHHHHHHHSCCSS-EEEEE-----
T ss_pred HHHHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHH--HHHHHHHHHHhcCCCc-cEEEe-----
Confidence 345666666543 5678999999999999999988766666666666554 4444454443 33322 33332
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecccccc-------CCCHHHHHHHHHhcCCc
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCS-------RLGGEECTKRLTSLGLE 317 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~-------~~~~~~l~~~L~~aGf~ 317 (343)
++....+.++||+|++..++|++.+. +..+.++++.|+| ||.++ +++..... ......|.+.+ ...+.
T Consensus 106 d~~~~~~~~~~DvVLa~k~LHlL~~~--~~al~~v~~~L~p-ggvfI-Sfptksl~Gr~~gm~~~Y~~~~~~~~-~~~~~ 180 (200)
T 3fzg_A 106 NKESDVYKGTYDVVFLLKMLPVLKQQ--DVNILDFLQLFHT-QNFVI-SFPIKSLSGKEKGMEENYQLWFESFT-KGWIK 180 (200)
T ss_dssp CCHHHHTTSEEEEEEEETCHHHHHHT--TCCHHHHHHTCEE-EEEEE-EEECCCCC--CTTCCCCHHHHHHHHT-TTTSC
T ss_pred cccccCCCCCcChhhHhhHHHhhhhh--HHHHHHHHHHhCC-CCEEE-EeChHHhcCCCcchhhhHHHHHHHhc-cCcce
Confidence 22212356789999999999999333 3367799999999 76654 43322211 11155566555 55566
Q ss_pred EEEeeec
Q 019282 318 YIGKKTH 324 (343)
Q Consensus 318 ~v~~~~~ 324 (343)
.+.....
T Consensus 181 ~~~~~~~ 187 (200)
T 3fzg_A 181 ILDSKVI 187 (200)
T ss_dssp EEEEEEE
T ss_pred eeeeeee
Confidence 5554443
No 135
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.25 E-value=3.3e-11 Score=103.33 Aligned_cols=114 Identities=16% Similarity=0.105 Sum_probs=82.6
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC-CCCCce
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF-GSGVVY 255 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~-~~~~~f 255 (343)
++++++.+|||||||. +.+|.+..|.+.+++.... ++.+..++..+++.. ..+++|
T Consensus 8 ~g~~~g~~vL~~~~g~------------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS------------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp TTCCTTSEEEEEECTT------------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCE
T ss_pred cCCCCCCEEEEecCCc------------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCE
Confidence 5788999999999996 1267777777776653211 255565544444410 136789
Q ss_pred eEEEEccccccC-CchHHHHHHHHHHhccCCCCcEEEEEecccc-----ccCCCHHHHHHHHHhcCC
Q 019282 256 DLIYASAVFLHM-PDKLVWVGLERLASKLRPYDGRIFVSHNIKF-----CSRLGGEECTKRLTSLGL 316 (343)
Q Consensus 256 DlIvs~~v~~hl-~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~-----~~~~~~~~l~~~L~~aGf 316 (343)
|+|++..++||+ ++... +|++++++||| ||++++.+.... ...+..+++.+.|+++||
T Consensus 65 D~V~~~~~l~~~~~~~~~--~l~~~~r~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAE--ILAEIARILRP-GGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp EEEEECCSTTCCCCCCHH--HHHHHHHHEEE-EEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred eEEEECChhhhcccCHHH--HHHHHHHHCCC-CEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 999999999999 77644 99999999999 999999643111 112348899999999999
No 136
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.25 E-value=1.3e-11 Score=115.88 Aligned_cols=111 Identities=13% Similarity=0.149 Sum_probs=72.7
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC-C-----CCCCCcEEEecccCCcC---CC
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ-G-----LLHKRPIIVRGEDMDFT---KF 249 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~-~-----~~~~~~~~~~~~~~dl~---~~ 249 (343)
++++.+|||||||+|.++..+++. +...++++|+++. +.+.+++.... + ....++.++.++..+++ .+
T Consensus 32 ~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~--~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 108 (313)
T 3bgv_A 32 KKRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADV--SVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKF 108 (313)
T ss_dssp C--CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHH--HHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTC
T ss_pred cCCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHH--HHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhc
Confidence 346789999999999999998873 3345555555554 44444432211 0 01114556665444432 12
Q ss_pred C-CCCceeEEEEccccccC-Cc-hHHHHHHHHHHhccCCCCcEEEEE
Q 019282 250 G-SGVVYDLIYASAVFLHM-PD-KLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 250 ~-~~~~fDlIvs~~v~~hl-~~-~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
. .+++||+|++..++||+ .+ .....+|++++++||| ||.++++
T Consensus 109 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp-gG~li~~ 154 (313)
T 3bgv_A 109 RDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSP-GGYFIGT 154 (313)
T ss_dssp SSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEE-EEEEEEE
T ss_pred ccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCC-CcEEEEe
Confidence 1 24589999999999998 33 4455699999999999 9999887
No 137
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.25 E-value=1.1e-11 Score=111.28 Aligned_cols=120 Identities=15% Similarity=0.089 Sum_probs=81.0
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
..++..+......+++.+|||||||+|..+..+++.++. +..++++|.++.+.+.+++... .+....++.++.++..+
T Consensus 42 ~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~ 120 (221)
T 3dr5_A 42 GQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLAD-NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLD 120 (221)
T ss_dssp HHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCT-TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred HHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHH
Confidence 345666665555555669999999999999999997752 2345555555566665555443 44432467777775554
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+.....+++||+|++..... ....+++++.++||| ||++++.
T Consensus 121 ~l~~~~~~~fD~V~~d~~~~-----~~~~~l~~~~~~Lkp-GG~lv~d 162 (221)
T 3dr5_A 121 VMSRLANDSYQLVFGQVSPM-----DLKALVDAAWPLLRR-GGALVLA 162 (221)
T ss_dssp HGGGSCTTCEEEEEECCCTT-----THHHHHHHHHHHEEE-EEEEEET
T ss_pred HHHHhcCCCcCeEEEcCcHH-----HHHHHHHHHHHHcCC-CcEEEEe
Confidence 43221257899999865432 233489999999999 9999885
No 138
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=4.4e-11 Score=109.85 Aligned_cols=141 Identities=11% Similarity=0.032 Sum_probs=88.5
Q ss_pred HHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC---CCCCCCcEEEecccCCcCC-
Q 019282 173 LAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ---GLLHKRPIIVRGEDMDFTK- 248 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~---~~~~~~~~~~~~~~~dl~~- 248 (343)
+.......++.+|||+|||+|.++..++...+...++++|+++.....+ +++... ....+++.++.++..++..
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a--~~n~~~~~~~~l~~~v~~~~~D~~~~~~~ 105 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFA--RRSLELPDNAAFSARIEVLEADVTLRAKA 105 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHH--HHHTTSGGGTTTGGGEEEEECCTTCCHHH
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHH--HHHHHhhhhCCCcceEEEEeCCHHHHhhh
Confidence 3344566778899999999999999999987655566666665544444 443322 2222246677664444310
Q ss_pred ----CCCCCceeEEEEccccccC----------------CchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHH
Q 019282 249 ----FGSGVVYDLIYASAVFLHM----------------PDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECT 308 (343)
Q Consensus 249 ----~~~~~~fDlIvs~~v~~hl----------------~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~ 308 (343)
...+++||+|+++..+... .......+++.+.++||| ||++++.+... ...++.
T Consensus 106 ~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~-----~~~~~~ 179 (260)
T 2ozv_A 106 RVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVS-GGQLSLISRPQ-----SVAEII 179 (260)
T ss_dssp HHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEE-EEEEEEEECGG-----GHHHHH
T ss_pred hhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCC-CCEEEEEEcHH-----HHHHHH
Confidence 0135789999998544322 112244589999999999 99999876432 245566
Q ss_pred HHHHhcCCcEEEee
Q 019282 309 KRLTSLGLEYIGKK 322 (343)
Q Consensus 309 ~~L~~aGf~~v~~~ 322 (343)
+.+++. |..+...
T Consensus 180 ~~l~~~-~~~~~i~ 192 (260)
T 2ozv_A 180 AACGSR-FGGLEIT 192 (260)
T ss_dssp HHHTTT-EEEEEEE
T ss_pred HHHHhc-CCceEEE
Confidence 677664 7655433
No 139
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.24 E-value=2.8e-11 Score=108.10 Aligned_cols=112 Identities=16% Similarity=0.170 Sum_probs=79.0
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d 245 (343)
...+.+.+.+.+.+.++.+|||||||+|.++..+++.. ..++++|+++ .+.+.+++..... . ++.++.++..+
T Consensus 55 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~--~~~~~a~~~~~~~--~-~v~~~~~d~~~ 127 (231)
T 1vbf_A 55 ALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINE--KMYNYASKLLSYY--N-NIKLILGDGTL 127 (231)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCH--HHHHHHHHHHTTC--S-SEEEEESCGGG
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCH--HHHHHHHHHHhhc--C-CeEEEECCccc
Confidence 34567777777888899999999999999999999864 4455555554 4444444433211 1 45566553332
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
. ...+++||+|++..+++|+.+ ++.++||| ||++++...
T Consensus 128 ~--~~~~~~fD~v~~~~~~~~~~~--------~~~~~L~p-gG~l~~~~~ 166 (231)
T 1vbf_A 128 G--YEEEKPYDRVVVWATAPTLLC--------KPYEQLKE-GGIMILPIG 166 (231)
T ss_dssp C--CGGGCCEEEEEESSBBSSCCH--------HHHHTEEE-EEEEEEEEC
T ss_pred c--cccCCCccEEEECCcHHHHHH--------HHHHHcCC-CcEEEEEEc
Confidence 1 223578999999999998864 58899999 999998753
No 140
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.24 E-value=3.7e-11 Score=111.55 Aligned_cols=113 Identities=14% Similarity=0.141 Sum_probs=74.4
Q ss_pred CCCeEEEEcCCcCH----HHHHHHHHcCCC--ceEEEEcChhHHHHHHHHhccc-----CCCC---------------C-
Q 019282 181 PNSHVLEIGCGTLR----VGVHFIRYLNPE--NFHCLERDELSLMAAFRYELPS-----QGLL---------------H- 233 (343)
Q Consensus 181 ~~~rVLDIGCGtG~----~a~~la~~~~~~--~~~vvdid~s~~~~a~a~~~~~-----~~~~---------------~- 233 (343)
++.+|||+|||||. ++..+++.++.. ++.++++|.+..+.+.|++..- .+.+ +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 666667664421 2344444444444554444210 0000 0
Q ss_pred ---------CCcEEEecccCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 234 ---------KRPIIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 234 ---------~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
.++.+..++..+.+ ++..+.||+|+|.++++|+.++....+++++++.|+| ||.|++.+.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~-~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~p-gG~L~lg~s 253 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQ-YNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKP-DGLLFAGHS 253 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSS-CCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEE-EEEEEECTT
T ss_pred ceeechhhcccCeEEecccCCCC-CCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCC-CcEEEEEec
Confidence 14556655333311 2224689999999999999888777899999999999 999999754
No 141
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.24 E-value=1.6e-11 Score=119.56 Aligned_cols=124 Identities=16% Similarity=0.196 Sum_probs=85.1
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHh-----c-ccCCCCCCCcEE
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYE-----L-PSQGLLHKRPII 238 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~-----~-~~~~~~~~~~~~ 238 (343)
.....+..+.+.+.+.++.+|||||||+|.+++.++...+...++++|+++.+...+.++. + ...+....++.+
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 4456677777778999999999999999999999998665544667766665555443311 0 112332236778
Q ss_pred EecccCCcCCCCC-CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 239 VRGEDMDFTKFGS-GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 239 ~~~~~~dl~~~~~-~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+.++..+++ +.. -..||+|+++..+ +.++ ....|.+++++||| ||+|++.
T Consensus 237 i~GD~~~lp-~~d~~~~aDVVf~Nn~~-F~pd--l~~aL~Ei~RvLKP-GGrIVss 287 (438)
T 3uwp_A 237 ERGDFLSEE-WRERIANTSVIFVNNFA-FGPE--VDHQLKERFANMKE-GGRIVSS 287 (438)
T ss_dssp EECCTTSHH-HHHHHHTCSEEEECCTT-CCHH--HHHHHHHHHTTSCT-TCEEEES
T ss_pred EECcccCCc-cccccCCccEEEEcccc-cCch--HHHHHHHHHHcCCC-CcEEEEe
Confidence 877544433 110 1479999998776 3333 34488999999999 9999986
No 142
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.24 E-value=2.6e-11 Score=110.86 Aligned_cols=133 Identities=17% Similarity=0.060 Sum_probs=89.7
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCC-CCCCcee
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKF-GSGVVYD 256 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~-~~~~~fD 256 (343)
..++.+|||||||+|..+..++...+...++++|++. .+.+.++++.. .++ . ++.++.++..++... ...++||
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~l-~-~v~~~~~d~~~~~~~~~~~~~fD 153 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATR--KKVAFVERAIEVLGL-K-GARALWGRAEVLAREAGHREAYA 153 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCH--HHHHHHHHHHHHHTC-S-SEEEEECCHHHHTTSTTTTTCEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHhCC-C-ceEEEECcHHHhhcccccCCCce
Confidence 4567899999999999999999877666655555555 44444454433 333 2 467777755555421 1247899
Q ss_pred EEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 257 LIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 257 lIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
+|++..+. +. ..+++.+.++||| ||++++..+..... ...++...+++.||+.+.....
T Consensus 154 ~I~s~a~~----~~--~~ll~~~~~~Lkp-gG~l~~~~g~~~~~--e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 154 RAVARAVA----PL--CVLSELLLPFLEV-GGAAVAMKGPRVEE--ELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp EEEEESSC----CH--HHHHHHHGGGEEE-EEEEEEEECSCCHH--HHTTHHHHHHHHTEEEEEEEEE
T ss_pred EEEECCcC----CH--HHHHHHHHHHcCC-CeEEEEEeCCCcHH--HHHHHHHHHHHcCCeEEEEEEe
Confidence 99997542 32 3489999999999 99998865421111 1345667788899998876543
No 143
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.24 E-value=1.1e-10 Score=101.78 Aligned_cols=132 Identities=11% Similarity=0.123 Sum_probs=82.6
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC--CCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN--PENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~--~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
+.+.+.....++++.+|||||||+|.++..+++.++ ...++++|+++. . . ..++.++.++..+.
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~--------~----~--~~~v~~~~~d~~~~ 75 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM--------D----P--IPNVYFIQGEIGKD 75 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC--------C----C--CTTCEEEECCTTTT
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc--------C----C--CCCceEEEccccch
Confidence 444343333467888999999999999999998776 344555555541 0 0 11345555533332
Q ss_pred CC------------------------CCCCCceeEEEEccccccCCc----hH-----HHHHHHHHHhccCCCCcEEEEE
Q 019282 247 TK------------------------FGSGVVYDLIYASAVFLHMPD----KL-----VWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 ~~------------------------~~~~~~fDlIvs~~v~~hl~~----~~-----~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.. + .+++||+|++..++++.+. .. ...++++++++||| ||.+++.
T Consensus 76 ~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp-gG~lv~~ 153 (201)
T 2plw_A 76 NMNNIKNINYIDNMNNNSVDYKLKEIL-QDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINI-GGTYIVK 153 (201)
T ss_dssp SSCCC-----------CHHHHHHHHHH-TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEE
T ss_pred hhhhhccccccccccchhhHHHHHhhc-CCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC-CCEEEEE
Confidence 20 1 2468999999988876532 11 12378899999999 9999886
Q ss_pred eccccccCCCHHHHHHHHHhcCCcEEEe
Q 019282 294 HNIKFCSRLGGEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 294 ~~~~~~~~~~~~~l~~~L~~aGf~~v~~ 321 (343)
... .....++...++. .|..+..
T Consensus 154 ~~~----~~~~~~l~~~l~~-~f~~v~~ 176 (201)
T 2plw_A 154 MYL----GSQTNNLKTYLKG-MFQLVHT 176 (201)
T ss_dssp EEC----STTHHHHHHHHHT-TEEEEEE
T ss_pred EeC----CCCHHHHHHHHHH-HHheEEE
Confidence 421 1224566666655 4765554
No 144
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.24 E-value=1.5e-11 Score=110.26 Aligned_cols=131 Identities=15% Similarity=0.087 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc-CCCCCCCceeEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF-TKFGSGVVYDLI 258 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl-~~~~~~~~fDlI 258 (343)
++.+|||||||+|.++..+++..+...++++ |.+..+.+.+++... .+. . ++.++.++..++ +....+++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~gi--D~s~~~l~~a~~~~~~~~l-~-nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGI--EVHSPGVGACLASAHEEGL-S-NLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEE--CSCHHHHHHHHHHHHHTTC-S-SEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEE--EecHHHHHHHHHHHHHhCC-C-cEEEEECCHHHHHHHHcCCCChheE
Confidence 5679999999999999999987766554554 555555554444333 333 2 467777655553 211246799999
Q ss_pred EEccccccCCchHH------HHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhc-CCcEEE
Q 019282 259 YASAVFLHMPDKLV------WVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSL-GLEYIG 320 (343)
Q Consensus 259 vs~~v~~hl~~~~~------~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~a-Gf~~v~ 320 (343)
+++....+...... ..++++++++||| ||.+++......+ .+.+.+.+... +|+.+.
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~Lkp-GG~l~i~td~~~~----~~~~~~~~~~~~~~~~~~ 173 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQL-GGVFHMATDWEPY----AEHMLEVMSSIDGYKNLS 173 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEE-EEEEEEEESCHHH----HHHHHHHHHTSTTEEECC
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCC-CcEEEEEeCCHHH----HHHHHHHHHhCCCccccc
Confidence 99755433322221 2489999999999 9999987532211 34455556554 576543
No 145
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.24 E-value=7.7e-12 Score=113.75 Aligned_cols=139 Identities=12% Similarity=0.118 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC-cC-CCCC--CCce
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD-FT-KFGS--GVVY 255 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d-l~-~~~~--~~~f 255 (343)
++.+|||+|||+|.++..++...+...++++|+++.+... ++++.. .+. .+++.++.++..+ +. .+.. +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~--a~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNY--AKKNVEQNNL-SDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHH--HHHHHHHTTC-TTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHH--HHHHHHHcCC-CccEEEEEcchhhhhhhhhhcccCCcc
Confidence 5679999999999999999886655556666666555444 444333 333 3356777765443 22 1221 2589
Q ss_pred eEEEEccccccCCc-------------hHHHHHHHHHHhccCCCCcEEEEEec-----------cc-----cccCCCHHH
Q 019282 256 DLIYASAVFLHMPD-------------KLVWVGLERLASKLRPYDGRIFVSHN-----------IK-----FCSRLGGEE 306 (343)
Q Consensus 256 DlIvs~~v~~hl~~-------------~~~~~~L~~l~r~LkP~GG~lvi~~~-----------~~-----~~~~~~~~~ 306 (343)
|+|+++..+++... .....++.+++++||| ||.+.+... .. .......++
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkp-gG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 220 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAE-GGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAP 220 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHH-HTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHH
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEec-CCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHH
Confidence 99999876655431 0112356777888888 777654310 00 001112478
Q ss_pred HHHHHHhcCCcEEEeee
Q 019282 307 CTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 307 l~~~L~~aGf~~v~~~~ 323 (343)
+.++++++||+.++...
T Consensus 221 ~~~~l~~~Gf~~v~~~~ 237 (254)
T 2h00_A 221 LKEELRIQGVPKVTYTE 237 (254)
T ss_dssp HHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHcCCCceEEEE
Confidence 89999999999876543
No 146
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.24 E-value=6.2e-11 Score=106.89 Aligned_cols=129 Identities=14% Similarity=0.157 Sum_probs=92.8
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
.++++.+|||||||+|.++..++...+...++++|+++.+...+ +++.. .++ .+++.+..++.. ..+...+.||
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A--~~N~~~~gl-~~~i~~~~~d~l--~~l~~~~~~D 86 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSA--VKNVEAHGL-KEKIQVRLANGL--AAFEETDQVS 86 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHH--HHHHHHTTC-TTTEEEEECSGG--GGCCGGGCCC
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHH--HHHHHHcCC-CceEEEEECchh--hhcccCcCCC
Confidence 45678899999999999999999865555667777777666665 43333 343 336777766332 2232223699
Q ss_pred EEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 257 LIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 257 lIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
+|+..++ +......++....+.|+| +|++++... .+.+.++++|.+.||..+...
T Consensus 87 ~IviaG~----Gg~~i~~Il~~~~~~L~~-~~~lVlq~~------~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 87 VITIAGM----GGRLIARILEEGLGKLAN-VERLILQPN------NREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp EEEEEEE----CHHHHHHHHHHTGGGCTT-CCEEEEEES------SCHHHHHHHHHHTTEEEEEEE
T ss_pred EEEEcCC----ChHHHHHHHHHHHHHhCC-CCEEEEECC------CCHHHHHHHHHHCCCEEEEEE
Confidence 9987654 333345689999999999 999998753 258899999999999988764
No 147
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.24 E-value=4.8e-11 Score=110.84 Aligned_cols=157 Identities=12% Similarity=0.025 Sum_probs=94.2
Q ss_pred CCccchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEc-ChhHHHHHHHHhcc-----c-CCCC-
Q 019282 161 EPWAGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLER-DELSLMAAFRYELP-----S-QGLL- 232 (343)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdi-d~s~~~~a~a~~~~-----~-~~~~- 232 (343)
..|.....+.+.+.......++.+|||||||+|.++..++.. ....++++|+ ++..+ +.++++. . .+..
T Consensus 59 ~~~~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~--~~a~~n~~~N~~~~~~~~~ 135 (281)
T 3bzb_A 59 HVWSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEIL--NSLESNIREHTANSCSSET 135 (281)
T ss_dssp ---CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHH--HHHHHHHHTTCC-------
T ss_pred eeecHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHH--HHHHHHHHHhhhhhccccc
Confidence 456667778888877665667889999999999999988874 3234556665 45444 4444333 1 1111
Q ss_pred --CCCcEEEecccCC-cCCCC---CCCceeEEEEccccccCCchHHHHHHHHHHhccC---CC-CcEEEEEecccc-ccC
Q 019282 233 --HKRPIIVRGEDMD-FTKFG---SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLR---PY-DGRIFVSHNIKF-CSR 301 (343)
Q Consensus 233 --~~~~~~~~~~~~d-l~~~~---~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~Lk---P~-GG~lvi~~~~~~-~~~ 301 (343)
..++.+...+..+ ..++. .+++||+|++..+++|.++... +++.+.++|+ |. ||++++...... ...
T Consensus 136 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~--ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~ 213 (281)
T 3bzb_A 136 VKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDA--LLRSVKMLLALPANDPTAVALVTFTHHRPHLA 213 (281)
T ss_dssp ---CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHH--HHHHHHHHBCCTTTCTTCEEEEEECC------
T ss_pred CCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHH--HHHHHHHHhcccCCCCCCEEEEEEEeeecccc
Confidence 0134444222112 11110 2468999999999988766544 9999999999 41 677766532111 101
Q ss_pred CCHHHHHHHHHhcC-CcEEEee
Q 019282 302 LGGEECTKRLTSLG-LEYIGKK 322 (343)
Q Consensus 302 ~~~~~l~~~L~~aG-f~~v~~~ 322 (343)
....++.+.++++| |++....
T Consensus 214 ~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 214 ERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp --CTHHHHHHHHSTTEEEEEEE
T ss_pred hhHHHHHHHHHhcCCEEEEEec
Confidence 12356677889999 9987764
No 148
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.23 E-value=3.9e-11 Score=124.92 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=84.0
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-----CCCCCCCcEEE
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-----QGLLHKRPIIV 239 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-----~~~~~~~~~~~ 239 (343)
.+..++.+.+.+...++.+|||||||+|.++..+++..+ ...++++|+++ .+.+.++++.. ......++.++
T Consensus 706 ~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~--emLe~AReRLa~~lnAkr~gl~nVefi 783 (950)
T 3htx_A 706 SKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISP--KGLARAAKMLHVKLNKEACNVKSATLY 783 (950)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCH--HHHHHHHHHHHHHTTTTCSSCSEEEEE
T ss_pred HHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCH--HHHHHHHHHhhhccchhhcCCCceEEE
Confidence 344555555555556788999999999999999988542 23445555554 55554443211 00111256777
Q ss_pred ecccCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 240 RGEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 240 ~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.++..+++ + .++.||+|++..+++|++++....++++++++||| | .++++
T Consensus 784 qGDa~dLp-~-~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKP-G-~LIIS 833 (950)
T 3htx_A 784 DGSILEFD-S-RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHP-K-LLIVS 833 (950)
T ss_dssp ESCTTSCC-T-TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCC-S-EEEEE
T ss_pred ECchHhCC-c-ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCC-C-EEEEE
Confidence 77555544 2 35789999999999999998877799999999999 8 66665
No 149
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.23 E-value=3.3e-11 Score=101.77 Aligned_cols=132 Identities=13% Similarity=0.080 Sum_probs=86.8
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC-
Q 019282 171 EFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK- 248 (343)
Q Consensus 171 ~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~- 248 (343)
+.+.....+.++.+|||+|||+|.++..+++.++ ...++++|+++ . .. . .++.+..++..+.+.
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~--~~---------~--~~~~~~~~d~~~~~~~ 77 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-M--DP---------I--VGVDFLQGDFRDELVM 77 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-C--CC---------C--TTEEEEESCTTSHHHH
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-c--cc---------c--CcEEEEEcccccchhh
Confidence 3333334477889999999999999999998763 35666666655 2 11 1 245555543333210
Q ss_pred -----CCCCCceeEEEEccccccCCchHH---------HHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhc
Q 019282 249 -----FGSGVVYDLIYASAVFLHMPDKLV---------WVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSL 314 (343)
Q Consensus 249 -----~~~~~~fDlIvs~~v~~hl~~~~~---------~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~a 314 (343)
...+++||+|++...+++.+.... ..+++++.++|+| ||.+++.... .....++.+.+.+.
T Consensus 78 ~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~-gG~l~~~~~~----~~~~~~~~~~~~~~ 152 (180)
T 1ej0_A 78 KALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAP-GGSFVVKVFQ----GEGFDEYLREIRSL 152 (180)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEEES----STTHHHHHHHHHHH
T ss_pred hhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCC-CcEEEEEEec----CCcHHHHHHHHHHh
Confidence 013468999999999887765411 3589999999999 9999986421 12245666777664
Q ss_pred CCcEEEee
Q 019282 315 GLEYIGKK 322 (343)
Q Consensus 315 Gf~~v~~~ 322 (343)
|+.+...
T Consensus 153 -~~~~~~~ 159 (180)
T 1ej0_A 153 -FTKVKVR 159 (180)
T ss_dssp -EEEEEEE
T ss_pred -hhhEEee
Confidence 7766644
No 150
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.23 E-value=1.7e-11 Score=118.65 Aligned_cols=117 Identities=16% Similarity=0.173 Sum_probs=79.4
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
..+.+.....+.++.+|||||||+|.++..+++. +...++++|++ .+.+.++++.......+++.++.++..++.
T Consensus 51 ~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s---~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 125 (376)
T 3r0q_C 51 YFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT---KMADHARALVKANNLDHIVEVIEGSVEDIS- 125 (376)
T ss_dssp HHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS---TTHHHHHHHHHHTTCTTTEEEEESCGGGCC-
T ss_pred HHHHHHhccccCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH---HHHHHHHHHHHHcCCCCeEEEEECchhhcC-
Confidence 3455555567788999999999999999999885 22345555555 344444444332223336777776444443
Q ss_pred CCCCCceeEEEEccccccCCc-hHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYASAVFLHMPD-KLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~-~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..++||+|++..+.+++.. .....++..+.++||| ||.+++.
T Consensus 126 --~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~Lkp-gG~li~~ 168 (376)
T 3r0q_C 126 --LPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKP-TGVMYPS 168 (376)
T ss_dssp --CSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEE-EEEEESS
T ss_pred --cCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCC-CeEEEEe
Confidence 3479999999776655532 3345589999999999 9999765
No 151
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.22 E-value=4.9e-11 Score=112.59 Aligned_cols=114 Identities=20% Similarity=0.227 Sum_probs=81.4
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCC-CceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEeccc
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNP-ENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGED 243 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~-~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~ 243 (343)
...+.+.+.+.+.+.++.+|||||||+|.++..+++..+. ..++++|+++.. .+.++++.. .+. . ++.+..++.
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~--~~~a~~~~~~~g~-~-~v~~~~~d~ 135 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKI--CEIAKRNVERLGI-E-NVIFVCGDG 135 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHH--HHHHHHHHHHTTC-C-SEEEEESCG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHH--HHHHHHHHHHcCC-C-CeEEEECCh
Confidence 3467777888888999999999999999999999987653 445666665544 444444332 333 2 355665533
Q ss_pred CCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 244 MDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 244 ~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
.+.. ..+++||+|++..+++|++ +++.++||| ||++++..
T Consensus 136 ~~~~--~~~~~fD~Iv~~~~~~~~~--------~~~~~~Lkp-gG~lvi~~ 175 (317)
T 1dl5_A 136 YYGV--PEFSPYDVIFVTVGVDEVP--------ETWFTQLKE-GGRVIVPI 175 (317)
T ss_dssp GGCC--GGGCCEEEEEECSBBSCCC--------HHHHHHEEE-EEEEEEEB
T ss_pred hhcc--ccCCCeEEEEEcCCHHHHH--------HHHHHhcCC-CcEEEEEE
Confidence 3322 1356899999999999987 357889999 99999863
No 152
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.22 E-value=8e-12 Score=111.50 Aligned_cols=131 Identities=18% Similarity=0.194 Sum_probs=82.1
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc-CCCC---
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF-TKFG--- 250 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl-~~~~--- 250 (343)
....++.+|||||||+|..+..+++.++ ...++++|+++ .+.+.++++.. .+. .+++.++.++..++ +.+.
T Consensus 54 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 54 IREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINP--DCAAITQQMLNFAGL-QDKVTILNGASQDLIPQLKKKY 130 (221)
T ss_dssp HHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCH--HHHHHHHHHHHHHTC-GGGEEEEESCHHHHGGGTTTTS
T ss_pred HHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCh--HHHHHHHHHHHHcCC-CCceEEEECCHHHHHHHHHHhc
Confidence 3345678999999999999999998764 34455555555 44554454333 333 23567777654332 2221
Q ss_pred CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhc-CCcE
Q 019282 251 SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSL-GLEY 318 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~a-Gf~~ 318 (343)
..++||+|++....++..+... +++.+ ++||| ||++++..-. ..+..++.+.+.+. +|+.
T Consensus 131 ~~~~fD~V~~d~~~~~~~~~~~--~~~~~-~~Lkp-gG~lv~~~~~----~~~~~~~~~~l~~~~~~~~ 191 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRYLPDTL--LLEKC-GLLRK-GTVLLADNVI----VPGTPDFLAYVRGSSSFEC 191 (221)
T ss_dssp CCCCCSEEEECSCGGGHHHHHH--HHHHT-TCCCT-TCEEEESCCC----CCCCHHHHHHHHHCTTEEE
T ss_pred CCCceEEEEEcCCcccchHHHH--HHHhc-cccCC-CeEEEEeCCC----CcchHHHHHHHhhCCCceE
Confidence 1268999999887776654333 67777 99999 9999875321 12234556666554 4443
No 153
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.22 E-value=1.4e-10 Score=105.09 Aligned_cols=139 Identities=14% Similarity=0.053 Sum_probs=94.2
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-C-CCCCCCcEEEecc
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-Q-GLLHKRPIIVRGE 242 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~-~~~~~~~~~~~~~ 242 (343)
.......+.....+.++.+|||+|||+|.++..+++.+. ...++++|+++.....+ ++... . + ..++.+..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a--~~~~~~~~g--~~~v~~~~~d 156 (258)
T 2pwy_A 81 YPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQA--ERNVRAFWQ--VENVRFHLGK 156 (258)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHH--HHHHHHHCC--CCCEEEEESC
T ss_pred cchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHH--HHHHHHhcC--CCCEEEEECc
Confidence 344456677777889999999999999999999998743 45566666655544444 43322 2 3 2356666653
Q ss_pred cCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 243 DMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 243 ~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
..+.+ + .++.||+|++ +.++... +++++.++|+| ||++++...... ...++.+.++++||..++..
T Consensus 157 ~~~~~-~-~~~~~D~v~~-----~~~~~~~--~l~~~~~~L~~-gG~l~~~~~~~~----~~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 157 LEEAE-L-EEAAYDGVAL-----DLMEPWK--VLEKAALALKP-DRFLVAYLPNIT----QVLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp GGGCC-C-CTTCEEEEEE-----ESSCGGG--GHHHHHHHEEE-EEEEEEEESCHH----HHHHHHHHHTTTTEEEEEEE
T ss_pred hhhcC-C-CCCCcCEEEE-----CCcCHHH--HHHHHHHhCCC-CCEEEEEeCCHH----HHHHHHHHHHHCCCceEEEE
Confidence 33331 2 3468999998 3455443 89999999999 999998753210 14567778888999877644
No 154
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.21 E-value=3.8e-11 Score=109.33 Aligned_cols=108 Identities=21% Similarity=0.187 Sum_probs=73.6
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc-CCCCCCCc
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF-TKFGSGVV 254 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl-~~~~~~~~ 254 (343)
.+.++.+|||||||+|..+..+++.++ ...++++|+++... +.++++.. .+.. .++.++.++..+. +.....++
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~--~~a~~~~~~~g~~-~~v~~~~~d~~~~l~~~~~~~~ 136 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHA--QVARENLQLAGVD-QRVTLREGPALQSLESLGECPA 136 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHH--HHHHHHHHHTTCT-TTEEEEESCHHHHHHTCCSCCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHH--HHHHHHHHHcCCC-CcEEEEEcCHHHHHHhcCCCCC
Confidence 445678999999999999999999776 45566666655444 44444333 3443 3677777655442 32222358
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
||+|++... ......+++++.++||| ||++++..
T Consensus 137 fD~V~~d~~-----~~~~~~~l~~~~~~Lkp-GG~lv~~~ 170 (248)
T 3tfw_A 137 FDLIFIDAD-----KPNNPHYLRWALRYSRP-GTLIIGDN 170 (248)
T ss_dssp CSEEEECSC-----GGGHHHHHHHHHHTCCT-TCEEEEEC
T ss_pred eEEEEECCc-----hHHHHHHHHHHHHhcCC-CeEEEEeC
Confidence 999998653 22334589999999999 99998863
No 155
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.21 E-value=5.6e-11 Score=115.12 Aligned_cols=118 Identities=10% Similarity=0.208 Sum_probs=79.1
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCC-CCcEEEecccCCcCC
Q 019282 171 EFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLH-KRPIIVRGEDMDFTK 248 (343)
Q Consensus 171 ~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~-~~~~~~~~~~~dl~~ 248 (343)
+.+.+.+...++.+|||+|||+|.++..+++..+...++++|+++.. .+.++++.. .+..+ .++.+..+ |+.+
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~a--l~~Ar~n~~~ngl~~~~~v~~~~~---D~~~ 286 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMA--VASSRLNVETNMPEALDRCEFMIN---NALS 286 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHH--HHHHHHHHHHHCGGGGGGEEEEEC---STTT
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHH--HHHHHHHHHHcCCCcCceEEEEec---hhhc
Confidence 34555566667789999999999999999998766666666666544 444444332 22211 12444554 3333
Q ss_pred CCCCCceeEEEEcccccc---CCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 249 FGSGVVYDLIYASAVFLH---MPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~h---l~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
...+++||+|+++..+|+ +.+.....+++++.++||| ||.+++..
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~iv~ 334 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI-NGELYIVA 334 (375)
T ss_dssp TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEE-EEEEEEEE
T ss_pred cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCC-CcEEEEEE
Confidence 334678999999999875 3444445689999999999 99999875
No 156
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.21 E-value=1.7e-11 Score=110.52 Aligned_cols=107 Identities=17% Similarity=0.232 Sum_probs=73.1
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCC-CCCCCc
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTK-FGSGVV 254 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~-~~~~~~ 254 (343)
..+.++.+|||||||+|..+..+++..+...++++|+++..... ++++.. .+. ..++.++.++..+... . .+++
T Consensus 67 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~--a~~~~~~~~~-~~~v~~~~~d~~~~~~~~-~~~~ 142 (232)
T 3ntv_A 67 IRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQY--AKQNLATYHF-ENQVRIIEGNALEQFENV-NDKV 142 (232)
T ss_dssp HHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHH--HHHHHHHTTC-TTTEEEEESCGGGCHHHH-TTSC
T ss_pred HhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHH--HHHHHHHcCC-CCcEEEEECCHHHHHHhh-ccCC
Confidence 34456789999999999999999986665666666666554444 444333 333 2367777775544321 1 1578
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
||+|++..... . ...+++++.++||| ||++++.
T Consensus 143 fD~V~~~~~~~---~--~~~~l~~~~~~Lkp-gG~lv~d 175 (232)
T 3ntv_A 143 YDMIFIDAAKA---Q--SKKFFEIYTPLLKH-QGLVITD 175 (232)
T ss_dssp EEEEEEETTSS---S--HHHHHHHHGGGEEE-EEEEEEE
T ss_pred ccEEEEcCcHH---H--HHHHHHHHHHhcCC-CeEEEEe
Confidence 99999764432 2 33489999999999 9999885
No 157
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.20 E-value=2.5e-11 Score=106.97 Aligned_cols=108 Identities=14% Similarity=0.141 Sum_probs=71.8
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCc-eeEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVV-YDLI 258 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~-fDlI 258 (343)
++.+|||+|||+|.++..++... .. .++++|.++.+.+.++++.. .+....++.++.++..++.....+++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AK--KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CS--EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CC--EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 57899999999999999877632 12 45666666666666555433 33311356677664444332112468 9999
Q ss_pred EEccccccCCchHHHHHHHHH--HhccCCCCcEEEEEec
Q 019282 259 YASAVFLHMPDKLVWVGLERL--ASKLRPYDGRIFVSHN 295 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l--~r~LkP~GG~lvi~~~ 295 (343)
++...++ ... ...+++.+ .++|+| ||.+++...
T Consensus 130 ~~~~~~~-~~~--~~~~l~~~~~~~~Lkp-gG~l~i~~~ 164 (201)
T 2ift_A 130 FLDPPFH-FNL--AEQAISLLCENNWLKP-NALIYVETE 164 (201)
T ss_dssp EECCCSS-SCH--HHHHHHHHHHTTCEEE-EEEEEEEEE
T ss_pred EECCCCC-Ccc--HHHHHHHHHhcCccCC-CcEEEEEEC
Confidence 9988864 333 34488888 678999 999998754
No 158
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.20 E-value=4e-11 Score=119.79 Aligned_cols=116 Identities=15% Similarity=0.208 Sum_probs=81.6
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~ 247 (343)
..+.+.+.+...++.+|||||||+|.++..+++. +... ++++|.+. +.+.++++.. .++ ..++.++.++..++
T Consensus 146 ~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~-~~~~--V~gvD~s~-~l~~A~~~~~~~gl-~~~v~~~~~d~~~~- 219 (480)
T 3b3j_A 146 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARK--IYAVEAST-MAQHAEVLVKSNNL-TDRIVVIPGKVEEV- 219 (480)
T ss_dssp HHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHT-TCSE--EEEEECHH-HHHHHHHHHHHTTC-TTTEEEEESCTTTC-
T ss_pred HHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHc-CCCE--EEEEEcHH-HHHHHHHHHHHcCC-CCcEEEEECchhhC-
Confidence 3444555555667889999999999999988873 3334 55555555 5555555433 333 33677777644433
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
...++||+|++..+++|+..+.....+.+++++||| ||.+++.
T Consensus 220 --~~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~Lkp-gG~li~~ 262 (480)
T 3b3j_A 220 --SLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKP-SGNMFPT 262 (480)
T ss_dssp --CCSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEE-EEEEESC
T ss_pred --ccCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCC-CCEEEEE
Confidence 234689999999888888766666688899999999 9999864
No 159
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.20 E-value=1.2e-10 Score=107.49 Aligned_cols=137 Identities=17% Similarity=0.171 Sum_probs=91.6
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
.....+...+.+.++.+|||+|||+|.++..+++.+ +...++++|+++ .+.+.++++.. .+. ..++.+..++
T Consensus 99 ~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~-~~~v~~~~~d--- 172 (277)
T 1o54_A 99 KDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKRE--EFAKLAESNLTKWGL-IERVTIKVRD--- 172 (277)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCH--HHHHHHHHHHHHTTC-GGGEEEECCC---
T ss_pred HHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCH--HHHHHHHHHHHHcCC-CCCEEEEECC---
Confidence 344566667788999999999999999999999874 344455555444 45444444332 222 1245555553
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
+.+...++.||+|++. .+++.. +++++.++|+| ||.+++...... ...++.+.|++.||..++..
T Consensus 173 ~~~~~~~~~~D~V~~~-----~~~~~~--~l~~~~~~L~p-gG~l~~~~~~~~----~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 173 ISEGFDEKDVDALFLD-----VPDPWN--YIDKCWEALKG-GGRFATVCPTTN----QVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp GGGCCSCCSEEEEEEC-----CSCGGG--THHHHHHHEEE-EEEEEEEESSHH----HHHHHHHHHHHSSEEEEEEE
T ss_pred HHHcccCCccCEEEEC-----CcCHHH--HHHHHHHHcCC-CCEEEEEeCCHH----HHHHHHHHHHHCCCceeEEE
Confidence 3322234689999983 444433 89999999999 999998763110 14567778888999877644
No 160
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.20 E-value=7e-11 Score=106.84 Aligned_cols=129 Identities=13% Similarity=0.093 Sum_probs=93.4
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
.++++.+|||||||+|.++..++...+...++++|+++.+...+. ++.+ .++ .+++.+..++..+.. ..++.||
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~--~N~~~~gl-~~~I~~~~gD~l~~~--~~~~~~D 92 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSAL--KNVSEHGL-TSKIDVRLANGLSAF--EEADNID 92 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHH--HHHHHTTC-TTTEEEEECSGGGGC--CGGGCCC
T ss_pred hCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHH--HHHHHcCC-CCcEEEEECchhhcc--ccccccC
Confidence 467788999999999999999998654455677777776666664 3333 343 346777776443332 2233799
Q ss_pred EEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 257 LIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 257 lIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
+|+..++- ......++....+.|++ +|+|+++.. .+.+.++++|.++||+.+...
T Consensus 93 ~IviaGmG----g~lI~~IL~~~~~~l~~-~~~lIlqp~------~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 93 TITICGMG----GRLIADILNNDIDKLQH-VKTLVLQPN------NREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp EEEEEEEC----HHHHHHHHHHTGGGGTT-CCEEEEEES------SCHHHHHHHHHHTTEEEEEEE
T ss_pred EEEEeCCc----hHHHHHHHHHHHHHhCc-CCEEEEECC------CChHHHHHHHHHCCCEEEEEE
Confidence 98875443 33445588999999999 999988852 348899999999999988755
No 161
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.19 E-value=5.2e-11 Score=107.86 Aligned_cols=140 Identities=16% Similarity=0.132 Sum_probs=81.0
Q ss_pred HHHHHHHHhcCCC-CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc---
Q 019282 168 DVFEFLAEASHIT-PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED--- 243 (343)
Q Consensus 168 ~~~~~l~~~~~l~-~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~--- 243 (343)
..++.+.+...+. ++.+|||||||||.++..+++. +.. .++++|.++.|.+.+.+... +........
T Consensus 23 ~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~--~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~ 93 (232)
T 3opn_A 23 LKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAK--LVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRN 93 (232)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCS--EEEEECSSCCCCCHHHHTCT------TEEEECSCCGGG
T ss_pred HHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCC--EEEEEcCCHHHHHHHHHhCc------cccccccceEEE
Confidence 3444455555554 4679999999999999999885 223 45555555555444333111 111110000
Q ss_pred CCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccc-----------------cCCCHHH
Q 019282 244 MDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFC-----------------SRLGGEE 306 (343)
Q Consensus 244 ~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~-----------------~~~~~~~ 306 (343)
....++. ...||.+.+..++.++ ..+|.+++++||| ||.+++.....+. .....++
T Consensus 94 ~~~~~~~-~~~~d~~~~D~v~~~l-----~~~l~~i~rvLkp-gG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~ 166 (232)
T 3opn_A 94 AVLADFE-QGRPSFTSIDVSFISL-----DLILPPLYEILEK-NGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEK 166 (232)
T ss_dssp CCGGGCC-SCCCSEEEECCSSSCG-----GGTHHHHHHHSCT-TCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHH
T ss_pred eCHhHcC-cCCCCEEEEEEEhhhH-----HHHHHHHHHhccC-CCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHH
Confidence 0101111 1124555555555444 2389999999999 9999886321110 0012678
Q ss_pred HHHHHHhcCCcEEEeee
Q 019282 307 CTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 307 l~~~L~~aGf~~v~~~~ 323 (343)
+.+.++++||+++....
T Consensus 167 l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 167 VLKTATQLGFSVKGLTF 183 (232)
T ss_dssp HHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHCCCEEEEEEE
Confidence 99999999999887664
No 162
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=1.6e-10 Score=101.99 Aligned_cols=114 Identities=19% Similarity=0.263 Sum_probs=79.6
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
..+...+.+.+.+.++.+|||||||+|.++..+++..+ ...++++|+++... +.+++... .+. . ++.+..++..
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~--~~a~~~~~~~~~-~-~v~~~~~d~~ 138 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELA--EKAERTLRKLGY-D-NVIVIVGDGT 138 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHH--HHHHHHHHHHTC-T-TEEEEESCGG
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHH--HHHHHHHHHcCC-C-CeEEEECCcc
Confidence 45666677777888999999999999999999998773 24556666655444 44443322 232 1 3555554321
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
..+..+++||+|++..+++|+++ ++.++||| ||++++...
T Consensus 139 --~~~~~~~~fD~v~~~~~~~~~~~--------~~~~~L~p-gG~lv~~~~ 178 (215)
T 2yxe_A 139 --LGYEPLAPYDRIYTTAAGPKIPE--------PLIRQLKD-GGKLLMPVG 178 (215)
T ss_dssp --GCCGGGCCEEEEEESSBBSSCCH--------HHHHTEEE-EEEEEEEES
T ss_pred --cCCCCCCCeeEEEECCchHHHHH--------HHHHHcCC-CcEEEEEEC
Confidence 11222568999999999998873 68999999 999998864
No 163
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.19 E-value=8e-11 Score=106.70 Aligned_cols=137 Identities=12% Similarity=0.017 Sum_probs=82.0
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-----CCCCCCCcEEEecccCC-cCCCCC
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-----QGLLHKRPIIVRGEDMD-FTKFGS 251 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-----~~~~~~~~~~~~~~~~d-l~~~~~ 251 (343)
...++.+|||||||+|.++..+++..+...++++|++..++..+ +++.. ......++.++.++..+ ++.+..
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A--~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~ 120 (235)
T 3ckk_A 43 RAQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYV--QDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFY 120 (235)
T ss_dssp ---CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHH--HHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCC
T ss_pred ccCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHH--HHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCC
Confidence 34566799999999999999999877666666666655554433 32211 00112357777776554 322224
Q ss_pred CCceeEEEEccccccCCchH------HHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcC-CcEEEe
Q 019282 252 GVVYDLIYASAVFLHMPDKL------VWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLG-LEYIGK 321 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~------~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aG-f~~v~~ 321 (343)
+++||.|++...-.+..... ...+++++.++||| ||.|++....... .+.+.+.+.+.| |+.+..
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~Lkp-GG~l~~~td~~~~----~~~~~~~l~~~~~f~~~~~ 192 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRV-GGLVYTITDVLEL----HDWMCTHFEEHPLFERVPL 192 (235)
T ss_dssp TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEE-EEEEEEEESCHHH----HHHHHHHHHTSTTEEEECG
T ss_pred CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCC-CCEEEEEeCCHHH----HHHHHHHHHHCCCccccCc
Confidence 67899998754332221100 12489999999999 9999887432111 344556677776 766543
No 164
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.18 E-value=1.3e-10 Score=109.72 Aligned_cols=156 Identities=14% Similarity=0.048 Sum_probs=95.4
Q ss_pred CCCccchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEE
Q 019282 160 GEPWAGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPII 238 (343)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~ 238 (343)
.+.+..+......+...+.+.++.+|||+|||+|..+..+++.+++ ...++++|.+..+.+.++++.. .+.. ++.+
T Consensus 97 ~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~-~~~v~avD~s~~~l~~a~~~~~~~g~~--~v~~ 173 (315)
T 1ixk_A 97 TGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRN-DGVIYAFDVDENRLRETRLNLSRLGVL--NVIL 173 (315)
T ss_dssp TTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTT-CSEEEEECSCHHHHHHHHHHHHHHTCC--SEEE
T ss_pred cceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCC-CCEEEEEcCCHHHHHHHHHHHHHhCCC--eEEE
Confidence 4444344444444444567889999999999999999999987643 1234445555555554444332 2332 4566
Q ss_pred EecccCCcCCCCCCCceeEEEEc------cccccCCch--------------HHHHHHHHHHhccCCCCcEEEEEecccc
Q 019282 239 VRGEDMDFTKFGSGVVYDLIYAS------AVFLHMPDK--------------LVWVGLERLASKLRPYDGRIFVSHNIKF 298 (343)
Q Consensus 239 ~~~~~~dl~~~~~~~~fDlIvs~------~v~~hl~~~--------------~~~~~L~~l~r~LkP~GG~lvi~~~~~~ 298 (343)
+.++..++.. .++.||+|++. .++++.++. ....+|+++.++||| ||+++++.-. .
T Consensus 174 ~~~D~~~~~~--~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp-GG~lv~stcs-~ 249 (315)
T 1ixk_A 174 FHSSSLHIGE--LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP-GGILVYSTCS-L 249 (315)
T ss_dssp ESSCGGGGGG--GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEESC-C
T ss_pred EECChhhccc--ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEEeCC-C
Confidence 6654444432 25689999984 334333321 113689999999999 9999886421 1
Q ss_pred ccCCCHHHHHHHHHhcCCcEEEee
Q 019282 299 CSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 299 ~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
...-..+.+...+++.||+.+...
T Consensus 250 ~~~Ene~~v~~~l~~~~~~~~~~~ 273 (315)
T 1ixk_A 250 EPEENEFVIQWALDNFDVELLPLK 273 (315)
T ss_dssp CGGGTHHHHHHHHHHSSEEEECCC
T ss_pred ChHHhHHHHHHHHhcCCCEEecCC
Confidence 111125667778888999877543
No 165
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.17 E-value=1.6e-10 Score=105.32 Aligned_cols=129 Identities=15% Similarity=0.112 Sum_probs=92.2
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
.++++.+|||||||+|.++..++...+...++++|+++.++..+.. +.+ .++ .+++.+..++..+.. .++..||
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~--N~~~~gl-~~~I~v~~gD~l~~~--~~~~~~D 92 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQK--QVRSSGL-TEQIDVRKGNGLAVI--EKKDAID 92 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH--HHHHTTC-TTTEEEEECSGGGGC--CGGGCCC
T ss_pred hCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH--HHHHcCC-CceEEEEecchhhcc--Ccccccc
Confidence 4677889999999999999999986544566777777776666643 333 343 336777766433322 2223599
Q ss_pred EEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 257 LIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 257 lIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
+|++.++ +......+|....+.|++ +|+|++... .+.+.++++|.+.||..+...
T Consensus 93 ~Iviagm----Gg~lI~~IL~~~~~~L~~-~~~lIlq~~------~~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 93 TIVIAGM----GGTLIRTILEEGAAKLAG-VTKLILQPN------IAAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp EEEEEEE----CHHHHHHHHHHTGGGGTT-CCEEEEEES------SCHHHHHHHHHHHTEEEEEEE
T ss_pred EEEEeCC----chHHHHHHHHHHHHHhCC-CCEEEEEcC------CChHHHHHHHHHCCCEEEEEE
Confidence 9987543 334455689999999999 999998852 358899999999999976544
No 166
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.17 E-value=5.3e-11 Score=114.06 Aligned_cols=110 Identities=17% Similarity=0.240 Sum_probs=74.9
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
..+.++.+|||||||+|.++..+++. +...++++|+++ +.+.++++.......+++.++.++..+++ + ++++||
T Consensus 62 ~~~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~---~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~-~~~~fD 135 (349)
T 3q7e_A 62 RHLFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS---ISDYAVKIVKANKLDHVVTIIKGKVEEVE-L-PVEKVD 135 (349)
T ss_dssp HHHHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST---HHHHHHHHHHHTTCTTTEEEEESCTTTCC-C-SSSCEE
T ss_pred cccCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH---HHHHHHHHHHHcCCCCcEEEEECcHHHcc-C-CCCceE
Confidence 34567889999999999999999985 334566666662 44444444332223335778877555543 2 357999
Q ss_pred EEEEccccccC-CchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 257 LIYASAVFLHM-PDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 257 lIvs~~v~~hl-~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+|++..+.+++ .......++..+.++||| ||.++..
T Consensus 136 ~Iis~~~~~~l~~~~~~~~~l~~~~r~Lkp-gG~li~~ 172 (349)
T 3q7e_A 136 IIISEWMGYCLFYESMLNTVLHARDKWLAP-DGLIFPD 172 (349)
T ss_dssp EEEECCCBBTBTBTCCHHHHHHHHHHHEEE-EEEEESC
T ss_pred EEEEccccccccCchhHHHHHHHHHHhCCC-CCEEccc
Confidence 99998765444 222344589999999999 9998754
No 167
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.17 E-value=3.8e-11 Score=102.85 Aligned_cols=109 Identities=11% Similarity=0.090 Sum_probs=70.3
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
..++.+|||+|||+|.++..+++. +.. .++++|.++.+.+.++++........++.++.++..++... ..+.||+|
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~fD~i 104 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-GMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC-LTGRFDLV 104 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-TCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH-BCSCEEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-CCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh-hcCCCCEE
Confidence 567889999999999999999875 333 45555555555555554433221122456666543332111 24579999
Q ss_pred EEccccccCCchHHHHHHHHHH--hccCCCCcEEEEEec
Q 019282 259 YASAVFLHMPDKLVWVGLERLA--SKLRPYDGRIFVSHN 295 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~--r~LkP~GG~lvi~~~ 295 (343)
++...++. ......++.+. ++|+| ||.+++...
T Consensus 105 ~~~~~~~~---~~~~~~~~~l~~~~~L~~-gG~l~~~~~ 139 (177)
T 2esr_A 105 FLDPPYAK---ETIVATIEALAAKNLLSE-QVMVVCETD 139 (177)
T ss_dssp EECCSSHH---HHHHHHHHHHHHTTCEEE-EEEEEEEEE
T ss_pred EECCCCCc---chHHHHHHHHHhCCCcCC-CcEEEEEEC
Confidence 99877632 22334677776 99999 999998753
No 168
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.17 E-value=8.1e-11 Score=112.40 Aligned_cols=113 Identities=15% Similarity=0.252 Sum_probs=76.0
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCC
Q 019282 171 EFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 171 ~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~ 249 (343)
+.+.+...+.++.+|||||||+|.++..+++. +...++++|+++ +...++++.. .+. ..++.++.++..+++ +
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~---~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~-~ 127 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE---ILYQAMDIIRLNKL-EDTITLIKGKIEEVH-L 127 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST---HHHHHHHHHHHTTC-TTTEEEEESCTTTSC-C
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH---HHHHHHHHHHHcCC-CCcEEEEEeeHHHhc-C
Confidence 55555566778899999999999999999885 333566666663 4444444333 333 236777776544443 2
Q ss_pred CCCCceeEEEEccccccC-CchHHHHHHHHHHhccCCCCcEEE
Q 019282 250 GSGVVYDLIYASAVFLHM-PDKLVWVGLERLASKLRPYDGRIF 291 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl-~~~~~~~~L~~l~r~LkP~GG~lv 291 (343)
++++||+|++..+.+.+ .......++.++.++||| ||.++
T Consensus 128 -~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lkp-gG~li 168 (340)
T 2fyt_A 128 -PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAK-GGSVY 168 (340)
T ss_dssp -SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEE-EEEEE
T ss_pred -CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCC-CcEEE
Confidence 34789999997743222 122344589999999999 99987
No 169
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.17 E-value=1.2e-10 Score=111.49 Aligned_cols=131 Identities=13% Similarity=0.084 Sum_probs=91.9
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.+.+..+|||||||+|.++..+++.++...++++|+ +.+.+.+++ . .++.++.+ |+.+ +.. .||+
T Consensus 190 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~-----~--~~v~~~~~---d~~~-~~~-~~D~ 254 (358)
T 1zg3_A 190 VFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ---PQVVGNLTG-----N--ENLNFVGG---DMFK-SIP-SADA 254 (358)
T ss_dssp HHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC---HHHHSSCCC-----C--SSEEEEEC---CTTT-CCC-CCSE
T ss_pred hccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc---HHHHhhccc-----C--CCcEEEeC---ccCC-CCC-CceE
Confidence 345668999999999999999999887655555554 234432221 1 23556655 3332 222 4999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCC--CcEEEEEecc---c--------c-------------ccCCCHHHHHHHH
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPY--DGRIFVSHNI---K--------F-------------CSRLGGEECTKRL 311 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~--GG~lvi~~~~---~--------~-------------~~~~~~~~l~~~L 311 (343)
|++..++||++++....+|++++++|+|. ||+++|.... . . ...++.+++.+++
T Consensus 255 v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll 334 (358)
T 1zg3_A 255 VLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLI 334 (358)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHH
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHH
Confidence 99999999999988667999999999983 5888775311 0 0 0112488999999
Q ss_pred HhcCCcEEEeee
Q 019282 312 TSLGLEYIGKKT 323 (343)
Q Consensus 312 ~~aGf~~v~~~~ 323 (343)
+++||+.++...
T Consensus 335 ~~aGf~~~~~~~ 346 (358)
T 1zg3_A 335 YDAGFSSYKITP 346 (358)
T ss_dssp HHTTCCEEEEEE
T ss_pred HHcCCCeeEEEe
Confidence 999999887654
No 170
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.17 E-value=1.9e-12 Score=116.62 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=88.1
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
.++.+|||+|||+|.++..+++. +..++++|.++.+.+.++++.. .++ ..++.++.++..++. .+++||+|
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~----~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~~d~~~~~---~~~~~D~v 148 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT----GMRVIAIDIDPVKIALARNNAEVYGI-ADKIEFICGDFLLLA---SFLKADVV 148 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTC-GGGEEEEESCHHHHG---GGCCCSEE
T ss_pred cCCCEEEECccccCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCC-CcCeEEEECChHHhc---ccCCCCEE
Confidence 36889999999999999999984 2345555555555555554433 222 125667766444433 45799999
Q ss_pred EEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc-------cc-cCCCHHHHHHHHHhcCCcEEEee
Q 019282 259 YASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK-------FC-SRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~-------~~-~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
+++..+++...... .+.+++++|+| ||.+++..... +. .....+.+...+...|...+...
T Consensus 149 ~~~~~~~~~~~~~~--~~~~~~~~L~p-gG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~ 217 (241)
T 3gdh_A 149 FLSPPWGGPDYATA--ETFDIRTMMSP-DGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQN 217 (241)
T ss_dssp EECCCCSSGGGGGS--SSBCTTTSCSS-CHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEE
T ss_pred EECCCcCCcchhhh--HHHHHHhhcCC-cceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEEeh
Confidence 99999998877654 67789999999 99976652111 11 12236777777777776655433
No 171
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.17 E-value=1.2e-10 Score=104.67 Aligned_cols=114 Identities=18% Similarity=0.294 Sum_probs=80.4
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
...+...+.+.+.+.++.+|||||||+|.++..+++..+ ..++++|+++.....+ +++.. .+.. ++.+..++.
T Consensus 76 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a--~~~~~~~~~~--~v~~~~~d~- 149 (235)
T 1jg1_A 76 APHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFA--KRNLERAGVK--NVHVILGDG- 149 (235)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHH--HHHHHHTTCC--SEEEEESCG-
T ss_pred cHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHH--HHHHHHcCCC--CcEEEECCc-
Confidence 455666677777888999999999999999999999776 5666666666554444 43322 3332 355555532
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
...+....+||+|++..+++++++ ++.++||| ||++++..+
T Consensus 150 -~~~~~~~~~fD~Ii~~~~~~~~~~--------~~~~~L~p-gG~lvi~~~ 190 (235)
T 1jg1_A 150 -SKGFPPKAPYDVIIVTAGAPKIPE--------PLIEQLKI-GGKLIIPVG 190 (235)
T ss_dssp -GGCCGGGCCEEEEEECSBBSSCCH--------HHHHTEEE-EEEEEEEEC
T ss_pred -ccCCCCCCCccEEEECCcHHHHHH--------HHHHhcCC-CcEEEEEEe
Confidence 222323346999999999988764 57899999 999999864
No 172
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.17 E-value=1.2e-10 Score=111.28 Aligned_cols=117 Identities=15% Similarity=0.159 Sum_probs=81.0
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~ 247 (343)
..+.+.+.+...++.+|||+|||+|.++..+++..+...++++|+++.....+ ++... .+. ...++.+ |..
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a--~~~~~~~~~---~~~~~~~---d~~ 255 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEAS--RATLAANGV---EGEVFAS---NVF 255 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHH--HHHHHHTTC---CCEEEEC---STT
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHH--HHHHHHhCC---CCEEEEc---ccc
Confidence 34455555555567799999999999999999877656677777766554444 43322 222 2334444 333
Q ss_pred CCCCCCceeEEEEccccccC---CchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 248 KFGSGVVYDLIYASAVFLHM---PDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl---~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
+.. +++||+|+++..+|+. .......++++++++||| ||.+++..+
T Consensus 256 ~~~-~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~ 304 (343)
T 2pjd_A 256 SEV-KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNS-GGELRIVAN 304 (343)
T ss_dssp TTC-CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEE-EEEEEEEEE
T ss_pred ccc-cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCC-CcEEEEEEc
Confidence 332 5789999999999763 333455699999999999 999998753
No 173
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.16 E-value=1.7e-10 Score=113.59 Aligned_cols=124 Identities=7% Similarity=-0.045 Sum_probs=82.0
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHH-----HHHhccc-CCCCCCCcEEEe
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAA-----FRYELPS-QGLLHKRPIIVR 240 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a-----~a~~~~~-~~~~~~~~~~~~ 240 (343)
..+...+.+.+.+.++.+|||||||+|.++..+++..+...++++|++......+ .++++.. .+....++.++.
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 4556667777888999999999999999999999877655566666666544433 1133222 332123566665
Q ss_pred cccCCcC-CCC-CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 241 GEDMDFT-KFG-SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 241 ~~~~dl~-~~~-~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
+++.... .+. ..++||+|+++..+ +.+ .....|+++.++||| ||++++..
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~--d~~~~L~el~r~LKp-GG~lVi~d 359 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDE--DLNKKVEKILQTAKV-GCKIISLK 359 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCH--HHHHHHHHHHTTCCT-TCEEEESS
T ss_pred cCccccccccccccCCCCEEEEeCcc-ccc--cHHHHHHHHHHhCCC-CeEEEEee
Confidence 4322110 010 13689999987666 333 344589999999999 99999873
No 174
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.15 E-value=6.4e-11 Score=106.25 Aligned_cols=115 Identities=16% Similarity=0.181 Sum_probs=75.1
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc-C
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF-T 247 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl-~ 247 (343)
...+...+...++.+|||||||+|..+..+++.++...+++ +|.++.+.+.+++... .+. ..++.++.++..+. +
T Consensus 43 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~--vD~~~~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~ 119 (233)
T 2gpy_A 43 MESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVS--IERDERRYEEAHKHVKALGL-ESRIELLFGDALQLGE 119 (233)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEE--ECCCHHHHHHHHHHHHHTTC-TTTEEEECSCGGGSHH
T ss_pred HHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEE--EECCHHHHHHHHHHHHHcCC-CCcEEEEECCHHHHHH
Confidence 33343334455778999999999999999999876444444 4554455555554433 333 23566666543332 1
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
....+++||+|++....+ ....+++.+.++|+| ||++++.
T Consensus 120 ~~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~p-gG~lv~~ 159 (233)
T 2gpy_A 120 KLELYPLFDVLFIDAAKG-----QYRRFFDMYSPMVRP-GGLILSD 159 (233)
T ss_dssp HHTTSCCEEEEEEEGGGS-----CHHHHHHHHGGGEEE-EEEEEEE
T ss_pred hcccCCCccEEEECCCHH-----HHHHHHHHHHHHcCC-CeEEEEE
Confidence 110146899999977653 233489999999999 9999886
No 175
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.15 E-value=4.9e-11 Score=108.34 Aligned_cols=123 Identities=17% Similarity=0.080 Sum_probs=76.8
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHH--cCCCceEEEEcChhHHHHHHHHhcccC----CCCCCC------
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRY--LNPENFHCLERDELSLMAAFRYELPSQ----GLLHKR------ 235 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~--~~~~~~~vvdid~s~~~~a~a~~~~~~----~~~~~~------ 235 (343)
.+++.+.+.....++.+|||+|||+|.++..+++. .+...++++|+++.....+ ++.... +... +
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A--~~~~~~~~~~~~~~-~~~~~~~ 114 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELA--AKNLALLSPAGLTA-RELERRE 114 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHH--HHHHHTTSHHHHHH-HHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHH--HHHHHHhhhccccc-cchhhhh
Confidence 56666665544446779999999999999999886 3334555666655554444 432211 1100 1
Q ss_pred -------------------cE-------------EEecccCCcCCC---CCCCceeEEEEccccccCCc-------hHHH
Q 019282 236 -------------------PI-------------IVRGEDMDFTKF---GSGVVYDLIYASAVFLHMPD-------KLVW 273 (343)
Q Consensus 236 -------------------~~-------------~~~~~~~dl~~~---~~~~~fDlIvs~~v~~hl~~-------~~~~ 273 (343)
+. +..++..+.... ...+.||+|+++..+.+... ....
T Consensus 115 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~ 194 (250)
T 1o9g_A 115 QSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVA 194 (250)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHH
T ss_pred hhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHH
Confidence 22 555533221100 02348999999877765543 3445
Q ss_pred HHHHHHHhccCCCCcEEEEEe
Q 019282 274 VGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 274 ~~L~~l~r~LkP~GG~lvi~~ 294 (343)
.++++++++||| ||++++..
T Consensus 195 ~~l~~~~~~Lkp-gG~l~~~~ 214 (250)
T 1o9g_A 195 GLLRSLASALPA-HAVIAVTD 214 (250)
T ss_dssp HHHHHHHHHSCT-TCEEEEEE
T ss_pred HHHHHHHHhcCC-CcEEEEeC
Confidence 689999999999 99999853
No 176
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.15 E-value=1.3e-10 Score=108.99 Aligned_cols=136 Identities=18% Similarity=0.203 Sum_probs=82.1
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc---CC-CCCCCcEEEecccCCcCCCCCCCce
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS---QG-LLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~---~~-~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
+++.+|||||||+|.++..+++..+...++++|+|+.....+ ++... .+ ..+.++.++.++..++... .+++|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~a--r~~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~f 158 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFC--RQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ-TSQTF 158 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHH--HHHCHHHHSSCTTCTTCCEECSCSCC---C-CCCCE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHH--HHhhhhcccccccCCceEEEEChHHHHHhh-cCCCc
Confidence 446799999999999999999865556677777777665555 33221 11 2234667776655444322 35789
Q ss_pred eEEEEccccccCCchHH--HHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 256 DLIYASAVFLHMPDKLV--WVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~--~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
|+|++.......+.... ..+++.++++|+| ||++++.....+...-....+.+.+++. |..+.
T Consensus 159 DvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lkp-gG~lv~~~~s~~~~~~~~~~~~~~l~~~-F~~v~ 223 (294)
T 3adn_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNP-GGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSDVG 223 (294)
T ss_dssp EEEEECC----------CCHHHHHHHHHTEEE-EEEEEEEEEECSSCCHHHHHHHHHHHHH-CSEEE
T ss_pred cEEEECCCCccCcchhccHHHHHHHHHHhcCC-CCEEEEecCCcccchHHHHHHHHHHHHH-CCCeE
Confidence 99999655433333221 4589999999999 9999887532222211134445556555 55544
No 177
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.14 E-value=5.3e-10 Score=100.58 Aligned_cols=131 Identities=10% Similarity=0.047 Sum_probs=85.6
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~ 247 (343)
....+....++.++.+|||+|||+|.++..+++. ... ++++|.++.+.+.++++.. .+. ..++.+..+ |+.
T Consensus 79 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~--v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~~---d~~ 150 (248)
T 2yvl_A 79 DSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGE--VWTFEAVEEFYKTAQKNLKKFNL-GKNVKFFNV---DFK 150 (248)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSE--EEEECSCHHHHHHHHHHHHHTTC-CTTEEEECS---CTT
T ss_pred hHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCE--EEEEecCHHHHHHHHHHHHHcCC-CCcEEEEEc---Chh
Confidence 3456666778889999999999999999999986 344 4555555555555554433 232 225555554 333
Q ss_pred CCC-CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 248 KFG-SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 248 ~~~-~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
+.. .++.||+|++. .+++.. +++++.++|+| ||++++...... ...++.+.+.+. |..++
T Consensus 151 ~~~~~~~~~D~v~~~-----~~~~~~--~l~~~~~~L~~-gG~l~~~~~~~~----~~~~~~~~l~~~-f~~~~ 211 (248)
T 2yvl_A 151 DAEVPEGIFHAAFVD-----VREPWH--YLEKVHKSLME-GAPVGFLLPTAN----QVIKLLESIENY-FGNLE 211 (248)
T ss_dssp TSCCCTTCBSEEEEC-----SSCGGG--GHHHHHHHBCT-TCEEEEEESSHH----HHHHHHHHSTTT-EEEEE
T ss_pred hcccCCCcccEEEEC-----CcCHHH--HHHHHHHHcCC-CCEEEEEeCCHH----HHHHHHHHHHhh-CCcce
Confidence 332 35689999983 444433 89999999999 999998864210 134555666666 76554
No 178
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.13 E-value=1.2e-11 Score=126.04 Aligned_cols=108 Identities=15% Similarity=0.093 Sum_probs=80.2
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC-CCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ-GLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~-~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
+.++.+|||||||+|.++..+++ .+..|+|||.+..+++.|+..... +.. .+.+..++..++.....+++||+
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~----~ga~V~giD~~~~~i~~a~~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~fD~ 137 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLAS----KGATIVGIDFQQENINVCRALAEENPDF--AAEFRVGRIEEVIAALEEGEFDL 137 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHTSTTS--EEEEEECCHHHHHHHCCTTSCSE
T ss_pred cCCCCeEEEECCCCcHHHHHHHh----CCCEEEEECCCHHHHHHHHHHHHhcCCC--ceEEEECCHHHHhhhccCCCccE
Confidence 34568999999999999999998 566788888888888777765442 221 45666665555532223578999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
|+|..++||++++.....+..+.+.|++ +|..++.
T Consensus 138 v~~~e~~ehv~~~~~~~~~~~~~~tl~~-~~~~~~~ 172 (569)
T 4azs_A 138 AIGLSVFHHIVHLHGIDEVKRLLSRLAD-VTQAVIL 172 (569)
T ss_dssp EEEESCHHHHHHHHCHHHHHHHHHHHHH-HSSEEEE
T ss_pred EEECcchhcCCCHHHHHHHHHHHHHhcc-ccceeeE
Confidence 9999999999987654456778888998 8877654
No 179
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.12 E-value=1.1e-10 Score=103.86 Aligned_cols=107 Identities=21% Similarity=0.121 Sum_probs=71.1
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC-CCC--CC
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT-KFG--SG 252 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~-~~~--~~ 252 (343)
...++.+|||||||+|..+..+++.++ ...++++|+++.. .+.++++.. .+. .+++.++.++..+.. .+. ..
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~--~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~ 131 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKH--ADIARSNIERANL-NDRVEVRTGLALDSLQQIENEKY 131 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHH--HHHHHHHHHHTTC-TTTEEEEESCHHHHHHHHHHTTC
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHH--HHHHHHHHHHcCC-CCcEEEEEcCHHHHHHHHHhcCC
Confidence 345678999999999999999999776 4555555555544 444444333 343 335677766443321 111 11
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
++||+|++..... ....+++++.++|+| ||++++.
T Consensus 132 ~~fD~v~~d~~~~-----~~~~~l~~~~~~L~p-gG~lv~~ 166 (223)
T 3duw_A 132 EPFDFIFIDADKQ-----NNPAYFEWALKLSRP-GTVIIGD 166 (223)
T ss_dssp CCCSEEEECSCGG-----GHHHHHHHHHHTCCT-TCEEEEE
T ss_pred CCcCEEEEcCCcH-----HHHHHHHHHHHhcCC-CcEEEEe
Confidence 5799999875532 234589999999999 9988876
No 180
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.12 E-value=6.6e-11 Score=101.74 Aligned_cols=120 Identities=12% Similarity=0.134 Sum_probs=73.9
Q ss_pred HHHHHHHHhc-CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 168 DVFEFLAEAS-HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 168 ~~~~~l~~~~-~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
.+.+.+.+.+ ...++.+|||+|||+|.++..++.. +...++++|+++. +.+.++++.. .+. ..++.++.++..+
T Consensus 30 ~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~--~~~~a~~~~~~~~~-~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 30 KVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFA--ALKVIKENIAITKE-PEKFEVRKMDANR 105 (187)
T ss_dssp HHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHH--HHHHHHHHHHHHTC-GGGEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHH--HHHHHHHHHHHhCC-CcceEEEECcHHH
Confidence 3444444443 3457889999999999999988873 3344555555554 4444444332 222 2246666664333
Q ss_pred cCC-CC-CCCceeEEEEccccccCCchHHHHHHHHH--HhccCCCCcEEEEEec
Q 019282 246 FTK-FG-SGVVYDLIYASAVFLHMPDKLVWVGLERL--ASKLRPYDGRIFVSHN 295 (343)
Q Consensus 246 l~~-~~-~~~~fDlIvs~~v~~hl~~~~~~~~L~~l--~r~LkP~GG~lvi~~~ 295 (343)
... .. .+++||+|++...++. .... ..++.+ .++|+| ||.+++...
T Consensus 106 ~~~~~~~~~~~fD~i~~~~~~~~-~~~~--~~~~~l~~~~~L~~-gG~l~~~~~ 155 (187)
T 2fhp_A 106 ALEQFYEEKLQFDLVLLDPPYAK-QEIV--SQLEKMLERQLLTN-EAVIVCETD 155 (187)
T ss_dssp HHHHHHHTTCCEEEEEECCCGGG-CCHH--HHHHHHHHTTCEEE-EEEEEEEEE
T ss_pred HHHHHHhcCCCCCEEEECCCCCc-hhHH--HHHHHHHHhcccCC-CCEEEEEeC
Confidence 211 00 1568999999888652 2222 256667 899999 999998753
No 181
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.11 E-value=3.5e-11 Score=101.82 Aligned_cols=105 Identities=13% Similarity=0.076 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC-CCC-CCCce
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT-KFG-SGVVY 255 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~-~~~-~~~~f 255 (343)
++++.+|||+|||+|.++..+++... .++++|.++.+.+.++++.. .+. ++.++.++..+.. ... ..++|
T Consensus 39 ~~~~~~vLD~GcG~G~~~~~l~~~~~----~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~ 111 (171)
T 1ws6_A 39 YPRRGRFLDPFAGSGAVGLEAASEGW----EAVLVEKDPEAVRLLKENVRRTGL---GARVVALPVEVFLPEAKAQGERF 111 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTTC----EEEEECCCHHHHHHHHHHHHHHTC---CCEEECSCHHHHHHHHHHTTCCE
T ss_pred ccCCCeEEEeCCCcCHHHHHHHHCCC----eEEEEeCCHHHHHHHHHHHHHcCC---ceEEEeccHHHHHHhhhccCCce
Confidence 33678999999999999999988532 25555555566555554332 222 4566655333321 111 12479
Q ss_pred eEEEEccccccCCchHHHHHHHHHH--hccCCCCcEEEEEec
Q 019282 256 DLIYASAVFLHMPDKLVWVGLERLA--SKLRPYDGRIFVSHN 295 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~~~~L~~l~--r~LkP~GG~lvi~~~ 295 (343)
|+|++...++ .... ..++.+. ++||| ||.+++...
T Consensus 112 D~i~~~~~~~--~~~~--~~~~~~~~~~~L~~-gG~~~~~~~ 148 (171)
T 1ws6_A 112 TVAFMAPPYA--MDLA--ALFGELLASGLVEA-GGLYVLQHP 148 (171)
T ss_dssp EEEEECCCTT--SCTT--HHHHHHHHHTCEEE-EEEEEEEEE
T ss_pred EEEEECCCCc--hhHH--HHHHHHHhhcccCC-CcEEEEEeC
Confidence 9999998775 2222 2566666 99999 999998754
No 182
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.11 E-value=4.5e-10 Score=97.45 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=78.7
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCC-------ceEEEEcChhHHHHHHHHhcccCCCCCCCcEEE-e
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPE-------NFHCLERDELSLMAAFRYELPSQGLLHKRPIIV-R 240 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~-------~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~-~ 240 (343)
+.+.......++++.+|||||||+|.++..+++.++.. ...++++|.++. . .. .++.++ .
T Consensus 10 l~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~------~----~~--~~~~~~~~ 77 (196)
T 2nyu_A 10 LLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI------F----PL--EGATFLCP 77 (196)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC------C----CC--TTCEEECS
T ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc------c----cC--CCCeEEEe
Confidence 44444444456888999999999999999999986541 023444444331 0 01 134444 4
Q ss_pred cccCCcCC------CCCCCceeEEEEccccccCC----chH-----HHHHHHHHHhccCCCCcEEEEEeccccccCCCHH
Q 019282 241 GEDMDFTK------FGSGVVYDLIYASAVFLHMP----DKL-----VWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGE 305 (343)
Q Consensus 241 ~~~~dl~~------~~~~~~fDlIvs~~v~~hl~----~~~-----~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~ 305 (343)
++..+... ...+++||+|++...++... +.. ...+++++.++||| ||++++..... ....
T Consensus 78 ~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~lv~~~~~~----~~~~ 152 (196)
T 2nyu_A 78 ADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQP-GGTFLCKTWAG----SQSR 152 (196)
T ss_dssp CCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEECCS----GGGH
T ss_pred ccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcC-CCEEEEEecCC----ccHH
Confidence 32221110 01235899999976554322 221 13589999999999 99999874211 1134
Q ss_pred HHHHHHHhcCCcEEEe
Q 019282 306 ECTKRLTSLGLEYIGK 321 (343)
Q Consensus 306 ~l~~~L~~aGf~~v~~ 321 (343)
++...+... |..+..
T Consensus 153 ~~~~~l~~~-f~~v~~ 167 (196)
T 2nyu_A 153 RLQRRLTEE-FQNVRI 167 (196)
T ss_dssp HHHHHHHHH-EEEEEE
T ss_pred HHHHHHHHH-hcceEE
Confidence 555555543 554443
No 183
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.11 E-value=6.4e-11 Score=105.35 Aligned_cols=108 Identities=23% Similarity=0.163 Sum_probs=71.4
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC-CCCC---
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT-KFGS--- 251 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~-~~~~--- 251 (343)
...++.+|||||||+|..+..+++.++ ...++++|+++.. .+.+++... .+. .+++.++.++..+.. ....
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~--~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~ 137 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKS--TALAKEYWEKAGL-SDKIGLRLSPAKDTLAELIHAGQ 137 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHH--HHHHHHHHHHTTC-TTTEEEEESCHHHHHHHHHTTTC
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHH--HHHHHHHHHHCCC-CCceEEEeCCHHHHHHHhhhccC
Confidence 344677999999999999999998775 4555666665544 444444333 333 335777766443321 1111
Q ss_pred CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 252 GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
.++||+|++... ......+++++.++||| ||++++..
T Consensus 138 ~~~fD~v~~~~~-----~~~~~~~l~~~~~~L~p-gG~lv~~~ 174 (225)
T 3tr6_A 138 AWQYDLIYIDAD-----KANTDLYYEESLKLLRE-GGLIAVDN 174 (225)
T ss_dssp TTCEEEEEECSC-----GGGHHHHHHHHHHHEEE-EEEEEEEC
T ss_pred CCCccEEEECCC-----HHHHHHHHHHHHHhcCC-CcEEEEeC
Confidence 168999997543 22334589999999999 99998863
No 184
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.11 E-value=2.6e-10 Score=103.32 Aligned_cols=126 Identities=12% Similarity=0.082 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHH----cCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc--CCCCCCC
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRY----LNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF--TKFGSGV 253 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~----~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl--~~~~~~~ 253 (343)
.++.+|||||||+|..+..+++. .+...++++|+++.. .+.++ +. ..++.++.++..++ .......
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~--l~~a~-----~~-~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR--CQIPA-----SD-MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT--CCCCG-----GG-CTTEEEEECCSSCSGGGGGGSSS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH--HHHHh-----cc-CCceEEEECcchhHHHHHhhccC
Confidence 34679999999999999999986 344556666665543 33222 11 23677777755543 1111234
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHh-ccCCCCcEEEEEeccccccCCCHHHHHHHHHhc--CCcEE
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLAS-KLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSL--GLEYI 319 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r-~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~a--Gf~~v 319 (343)
+||+|++... |. + ...+|.++.+ +||| ||++++.+.......+..+.+.+.+++. +|+..
T Consensus 152 ~fD~I~~d~~--~~-~--~~~~l~~~~r~~Lkp-GG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 152 AHPLIFIDNA--HA-N--TFNIMKWAVDHLLEE-GDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp CSSEEEEESS--CS-S--HHHHHHHHHHHTCCT-TCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred CCCEEEECCc--hH-h--HHHHHHHHHHhhCCC-CCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 7999998654 32 2 3348999997 9999 9999986421111222356788888887 57654
No 185
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.10 E-value=1.1e-09 Score=104.66 Aligned_cols=145 Identities=18% Similarity=0.105 Sum_probs=99.8
Q ss_pred cchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEec
Q 019282 164 AGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRG 241 (343)
Q Consensus 164 ~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~ 241 (343)
.....+...+.......++.+|||+|||+|.++..++... +...++++|+++.....+ +++.. .+.. ++.+..+
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a--~~n~~~~g~~--~i~~~~~ 261 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLA--REAALASGLS--WIRFLRA 261 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHH--HHHHHHTTCT--TCEEEEC
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHH--HHHHHHcCCC--ceEEEeC
Confidence 3556677777777888889999999999999999999876 556777777777666555 33333 3442 5677776
Q ss_pred ccCCcCCCCCCCceeEEEEccccccCCc--h----HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcC
Q 019282 242 EDMDFTKFGSGVVYDLIYASAVFLHMPD--K----LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLG 315 (343)
Q Consensus 242 ~~~dl~~~~~~~~fDlIvs~~v~~hl~~--~----~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aG 315 (343)
+..+++. ..+.||+|+++..+..... . ....+++++.++||| ||.+++... ..+.+.+.++ .|
T Consensus 262 D~~~~~~--~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkp-gG~l~i~t~-------~~~~~~~~~~-~g 330 (354)
T 3tma_A 262 DARHLPR--FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPP-GGRVALLTL-------RPALLKRALP-PG 330 (354)
T ss_dssp CGGGGGG--TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCT-TCEEEEEES-------CHHHHHHHCC-TT
T ss_pred ChhhCcc--ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCC-CcEEEEEeC-------CHHHHHHHhh-cC
Confidence 5555442 2356899999866643221 1 124589999999999 999988753 2344555555 89
Q ss_pred CcEEEeee
Q 019282 316 LEYIGKKT 323 (343)
Q Consensus 316 f~~v~~~~ 323 (343)
|+......
T Consensus 331 ~~~~~~~~ 338 (354)
T 3tma_A 331 FALRHARV 338 (354)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEE
Confidence 98776543
No 186
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.10 E-value=1.4e-10 Score=102.34 Aligned_cols=105 Identities=11% Similarity=0.093 Sum_probs=70.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLIY 259 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIv 259 (343)
++.+|||+|||+|.++..++.... . .++++|.++.+.+.++++.. .+. .++.++.++..++... ..++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~--~V~~vD~s~~~l~~a~~~~~~~~~--~~v~~~~~D~~~~~~~-~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-A--GATLIEMDRAVSQQLIKNLATLKA--GNARVVNSNAMSFLAQ-KGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-S--EEEEECSCHHHHHHHHHHHHHTTC--CSEEEECSCHHHHHSS-CCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-C--EEEEEECCHHHHHHHHHHHHHcCC--CcEEEEECCHHHHHhh-cCCCCCEEE
Confidence 578999999999999998776421 2 45666666666666555433 333 3566776644443222 356899999
Q ss_pred EccccccCCchHHHHHHHHHHh--ccCCCCcEEEEEec
Q 019282 260 ASAVFLHMPDKLVWVGLERLAS--KLRPYDGRIFVSHN 295 (343)
Q Consensus 260 s~~v~~hl~~~~~~~~L~~l~r--~LkP~GG~lvi~~~ 295 (343)
+...++ .... ..+++.+.+ +|+| ||++++...
T Consensus 128 ~~~p~~-~~~~--~~~l~~l~~~~~L~p-gG~l~i~~~ 161 (202)
T 2fpo_A 128 VDPPFR-RGLL--EETINLLEDNGWLAD-EALIYVESE 161 (202)
T ss_dssp ECCSSS-TTTH--HHHHHHHHHTTCEEE-EEEEEEEEE
T ss_pred ECCCCC-CCcH--HHHHHHHHhcCccCC-CcEEEEEEC
Confidence 987764 3333 337788865 5999 999998754
No 187
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.10 E-value=1.7e-10 Score=109.52 Aligned_cols=114 Identities=17% Similarity=0.225 Sum_probs=74.9
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCC
Q 019282 171 EFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 171 ~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~ 249 (343)
+.+.+...+.++.+|||||||+|.++..+++. +...++++|++ . +...++++.. .+. .+++.++.++..++. +
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~--~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~-~ 101 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-S--IIEMAKELVELNGF-SDKITLLRGKLEDVH-L 101 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-T--HHHHHHHHHHHTTC-TTTEEEEESCTTTSC-C
T ss_pred HHHHhhHhhcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-H--HHHHHHHHHHHcCC-CCCEEEEECchhhcc-C
Confidence 33433345567889999999999999998874 33456666666 2 3444444333 333 336777776444443 2
Q ss_pred CCCCceeEEEEccccccCC-chHHHHHHHHHHhccCCCCcEEEE
Q 019282 250 GSGVVYDLIYASAVFLHMP-DKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~-~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
++++||+|++..+.+++. ......++.++.++||| ||.++.
T Consensus 102 -~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lkp-gG~li~ 143 (328)
T 1g6q_1 102 -PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVE-GGLIFP 143 (328)
T ss_dssp -SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEE-EEEEES
T ss_pred -CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCC-CeEEEE
Confidence 247899999986654442 22334589999999999 999974
No 188
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.09 E-value=4.6e-10 Score=106.90 Aligned_cols=134 Identities=14% Similarity=0.007 Sum_probs=83.9
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCC--CCCce
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFG--SGVVY 255 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~--~~~~f 255 (343)
..++.+|||+|||+|.++..++.. +..++++|.++.+.+.++++.. .++.+.++.++.++..++.... ..++|
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~----ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~f 226 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAA----GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTY 226 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHT----TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCB
T ss_pred cCCCCcEEEcccccCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCc
Confidence 456789999999999999999883 2356666666666666665443 3332224667766444432110 14689
Q ss_pred eEEEEccccccCC--------chHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHH----hcCCcEE
Q 019282 256 DLIYASAVFLHMP--------DKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLT----SLGLEYI 319 (343)
Q Consensus 256 DlIvs~~v~~hl~--------~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~----~aGf~~v 319 (343)
|+|++........ ......+++++.++|+| ||.+++..... .....+.+.+.++ ++|+++.
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lkp-gG~lli~~~~~--~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSP-KALGLVLTAYS--IRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCT-TCCEEEEEECC--TTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred eEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCc-CcEEEEEECCC--CCCCHHHHHHHHHHHHHHcCCeEE
Confidence 9999954321111 12234589999999999 99988765322 1223555555554 6788765
No 189
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.09 E-value=8.1e-10 Score=100.94 Aligned_cols=109 Identities=18% Similarity=0.170 Sum_probs=73.2
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM 244 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 244 (343)
..+.+.+.+..... .++.+|||||||+|.++..+++.++...++++|++ +.+.+.+++.. .++.+..++..
T Consensus 70 ~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s--~~~~~~a~~~~------~~~~~~~~d~~ 140 (269)
T 1p91_A 70 LRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVS--KVAIKAAAKRY------PQVTFCVASSH 140 (269)
T ss_dssp HHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESC--HHHHHHHHHHC------TTSEEEECCTT
T ss_pred HHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHhC------CCcEEEEcchh
Confidence 44555555554332 56789999999999999999987644455555555 45555444321 13455655443
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
+++ + .+++||+|+++.+.. .++++.++||| ||++++..
T Consensus 141 ~~~-~-~~~~fD~v~~~~~~~---------~l~~~~~~L~p-gG~l~~~~ 178 (269)
T 1p91_A 141 RLP-F-SDTSMDAIIRIYAPC---------KAEELARVVKP-GGWVITAT 178 (269)
T ss_dssp SCS-B-CTTCEEEEEEESCCC---------CHHHHHHHEEE-EEEEEEEE
T ss_pred hCC-C-CCCceeEEEEeCChh---------hHHHHHHhcCC-CcEEEEEE
Confidence 333 2 357899999876532 57899999999 99998874
No 190
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.08 E-value=7e-10 Score=101.97 Aligned_cols=139 Identities=15% Similarity=0.053 Sum_probs=89.3
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-C-CCCCCCcEEEecc
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-Q-GLLHKRPIIVRGE 242 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~-~~~~~~~~~~~~~ 242 (343)
.......+...+.+.++.+|||+|||+|.++..+++.+. ...++++|+ ++.+.+.++++.. . +....++.+..++
T Consensus 84 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~g~~~~~v~~~~~d 161 (280)
T 1i9g_A 84 YPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQ--RADHAEHARRNVSGCYGQPPDNWRLVVSD 161 (280)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECS--CHHHHHHHHHHHHHHHTSCCTTEEEECSC
T ss_pred cHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeC--CHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 344556677778889999999999999999999998653 344455554 4455544444332 2 2112356666553
Q ss_pred cCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHh-cCCcEEE
Q 019282 243 DMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTS-LGLEYIG 320 (343)
Q Consensus 243 ~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~-aGf~~v~ 320 (343)
..+.. + .++.||+|++ +++++.. +++++.++|+| ||++++...... ...++.+.+.+ .||..++
T Consensus 162 ~~~~~-~-~~~~~D~v~~-----~~~~~~~--~l~~~~~~L~p-gG~l~~~~~~~~----~~~~~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 162 LADSE-L-PDGSVDRAVL-----DMLAPWE--VLDAVSRLLVA-GGVLMVYVATVT----QLSRIVEALRAKQCWTEPR 226 (280)
T ss_dssp GGGCC-C-CTTCEEEEEE-----ESSCGGG--GHHHHHHHEEE-EEEEEEEESSHH----HHHHHHHHHHHHSSBCCCE
T ss_pred hHhcC-C-CCCceeEEEE-----CCcCHHH--HHHHHHHhCCC-CCEEEEEeCCHH----HHHHHHHHHHhcCCcCCcE
Confidence 33332 2 3568999998 3444443 89999999999 999998753110 13345556666 7886543
No 191
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.07 E-value=4.3e-10 Score=100.49 Aligned_cols=114 Identities=20% Similarity=0.348 Sum_probs=75.3
Q ss_pred HHHHHHHhc--CCCCCCeEEEEcCCcCHHHHHHHHHcCC------CceEEEEcChhHHHHHHHHhccc-CCC---CCCCc
Q 019282 169 VFEFLAEAS--HITPNSHVLEIGCGTLRVGVHFIRYLNP------ENFHCLERDELSLMAAFRYELPS-QGL---LHKRP 236 (343)
Q Consensus 169 ~~~~l~~~~--~l~~~~rVLDIGCGtG~~a~~la~~~~~------~~~~vvdid~s~~~~a~a~~~~~-~~~---~~~~~ 236 (343)
+...+.+.+ .+.++.+|||||||+|.++..+++..+. ..++++|+++.....+ +++.. .+. ...++
T Consensus 70 ~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a--~~~~~~~~~~~~~~~~v 147 (227)
T 1r18_A 70 MHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRS--KANLNTDDRSMLDSGQL 147 (227)
T ss_dssp HHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHH--HHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHH--HHHHHhcCccccCCCce
Confidence 444444444 5788899999999999999999986542 3556666665544443 43322 110 01245
Q ss_pred EEEecccCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 237 IIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 237 ~~~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
.+..++..+ .+...++||+|++...++++. +++.++||| ||++++...
T Consensus 148 ~~~~~d~~~--~~~~~~~fD~I~~~~~~~~~~--------~~~~~~Lkp-gG~lvi~~~ 195 (227)
T 1r18_A 148 LIVEGDGRK--GYPPNAPYNAIHVGAAAPDTP--------TELINQLAS-GGRLIVPVG 195 (227)
T ss_dssp EEEESCGGG--CCGGGCSEEEEEECSCBSSCC--------HHHHHTEEE-EEEEEEEES
T ss_pred EEEECCccc--CCCcCCCccEEEECCchHHHH--------HHHHHHhcC-CCEEEEEEe
Confidence 566553332 122236899999999998875 568999999 999999864
No 192
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.06 E-value=1.1e-09 Score=101.36 Aligned_cols=108 Identities=15% Similarity=0.104 Sum_probs=69.3
Q ss_pred CeEEEEcCCc--CHHHHHHHHH-cCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC-CC-C--CCce
Q 019282 183 SHVLEIGCGT--LRVGVHFIRY-LNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK-FG-S--GVVY 255 (343)
Q Consensus 183 ~rVLDIGCGt--G~~a~~la~~-~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~-~~-~--~~~f 255 (343)
.+|||||||+ +..+..+++. .+.. .++++|.++.|.+.++++.... ...++.++.++..+... +. + .+.|
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~a--rVv~VD~sp~mLa~Ar~~l~~~-~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPES--RVVYVDNDPIVLTLSQGLLAST-PEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTC--EEEEEECCHHHHHTTHHHHCCC-SSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCC--EEEEEeCChHHHHHHHHHhccC-CCCcEEEEEecccChhhhhccccccccc
Confidence 5899999997 4444555543 3444 4555666666666665543221 22246677664433210 00 0 1234
Q ss_pred e-----EEEEccccccCCchH-HHHHHHHHHhccCCCCcEEEEEe
Q 019282 256 D-----LIYASAVFLHMPDKL-VWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 256 D-----lIvs~~v~~hl~~~~-~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
| .|+++.++||+++.. ...+++++++.|+| ||+|++++
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~P-GG~Lvls~ 200 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPS-GSYLAMSI 200 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCT-TCEEEEEE
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCC-CcEEEEEe
Confidence 4 588999999999865 35599999999999 99999985
No 193
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.05 E-value=7.4e-10 Score=103.15 Aligned_cols=133 Identities=14% Similarity=0.172 Sum_probs=83.2
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl 246 (343)
.+++.+.+.+...++.+|||+|||+|.++..++.. +...++++|+++.....+ +++.. .+. .+++.++.++..+.
T Consensus 110 ~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A--~~n~~~~~l-~~~v~~~~~D~~~~ 185 (284)
T 1nv8_A 110 ELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIA--RKNAERHGV-SDRFFVRKGEFLEP 185 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHH--HHHHHHTTC-TTSEEEEESSTTGG
T ss_pred HHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHH--HHHHHHcCC-CCceEEEECcchhh
Confidence 34455544433346679999999999999999987 656666666666555444 44333 333 33577777644332
Q ss_pred CCCCCCCce---eEEEEccccc-----------cCCchHH------HHHHHHHH-hccCCCCcEEEEEeccccccCCCHH
Q 019282 247 TKFGSGVVY---DLIYASAVFL-----------HMPDKLV------WVGLERLA-SKLRPYDGRIFVSHNIKFCSRLGGE 305 (343)
Q Consensus 247 ~~~~~~~~f---DlIvs~~v~~-----------hl~~~~~------~~~L~~l~-r~LkP~GG~lvi~~~~~~~~~~~~~ 305 (343)
..++| |+|+++.-+. |-+.... ..+++++. +.|+| ||.+++.++.. ..+
T Consensus 186 ----~~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~p-gG~l~~e~~~~-----q~~ 255 (284)
T 1nv8_A 186 ----FKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTS-GKIVLMEIGED-----QVE 255 (284)
T ss_dssp ----GGGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCT-TCEEEEECCTT-----CHH
T ss_pred ----cccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCC-CCEEEEEECch-----HHH
Confidence 12578 9999973221 2222111 14799999 99999 99999876422 244
Q ss_pred HHHHHHHhc
Q 019282 306 ECTKRLTSL 314 (343)
Q Consensus 306 ~l~~~L~~a 314 (343)
++.+.+++.
T Consensus 256 ~v~~~~~~~ 264 (284)
T 1nv8_A 256 ELKKIVSDT 264 (284)
T ss_dssp HHTTTSTTC
T ss_pred HHHHHHHhC
Confidence 555555544
No 194
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.04 E-value=1.7e-10 Score=105.16 Aligned_cols=106 Identities=13% Similarity=0.085 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC-CCC----C
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT-KFG----S 251 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~-~~~----~ 251 (343)
..++.+|||||||+|..+..+++.++ ...++++|+++.....+ ++... .+. ..++.++.++..++. .+. .
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a--~~~~~~~g~-~~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELG--LPVIKKAGV-DHKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHH--HHHHHHTTC-GGGEEEEESCHHHHHHHHHHSGGG
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHH--HHHHHHcCC-CCCeEEEECCHHHHHHHHHhccCC
Confidence 34567999999999999999999876 45566666666554444 44332 333 335667766544432 110 1
Q ss_pred CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 252 GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.++||+|++.... . ....+++++.++||| ||++++.
T Consensus 154 ~~~fD~V~~d~~~---~--~~~~~l~~~~~~Lkp-GG~lv~d 189 (247)
T 1sui_A 154 HGSYDFIFVDADK---D--NYLNYHKRLIDLVKV-GGVIGYD 189 (247)
T ss_dssp TTCBSEEEECSCS---T--THHHHHHHHHHHBCT-TCCEEEE
T ss_pred CCCEEEEEEcCch---H--HHHHHHHHHHHhCCC-CeEEEEe
Confidence 4689999987542 2 234589999999999 9999876
No 195
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.04 E-value=8.3e-10 Score=98.25 Aligned_cols=113 Identities=17% Similarity=0.242 Sum_probs=73.7
Q ss_pred HHHHHHhcC--CCCCCeEEEEcCCcCHHHHHHHHHcCC-CceEEEEcChhHHHHHHHHhccc-CCC---CCCCcEEEecc
Q 019282 170 FEFLAEASH--ITPNSHVLEIGCGTLRVGVHFIRYLNP-ENFHCLERDELSLMAAFRYELPS-QGL---LHKRPIIVRGE 242 (343)
Q Consensus 170 ~~~l~~~~~--l~~~~rVLDIGCGtG~~a~~la~~~~~-~~~~vvdid~s~~~~a~a~~~~~-~~~---~~~~~~~~~~~ 242 (343)
...+.+.+. +.++.+|||||||+|..+..+++..+. ..++++|+++.....+ +++.. .+. ...++.+..++
T Consensus 64 ~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a--~~~~~~~~~~~~~~~~v~~~~~d 141 (226)
T 1i1n_A 64 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS--VNNVRKDDPTLLSSGRVQLVVGD 141 (226)
T ss_dssp HHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHH--HHHHHHHCTHHHHTSSEEEEESC
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHH--HHHHHhhcccccCCCcEEEEECC
Confidence 334444443 778899999999999999999987632 4566666665544443 33222 111 01245566553
Q ss_pred cCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 243 DMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 243 ~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
..+. ....++||+|++...++++. +++.++||| ||++++...
T Consensus 142 ~~~~--~~~~~~fD~i~~~~~~~~~~--------~~~~~~Lkp-gG~lv~~~~ 183 (226)
T 1i1n_A 142 GRMG--YAEEAPYDAIHVGAAAPVVP--------QALIDQLKP-GGRLILPVG 183 (226)
T ss_dssp GGGC--CGGGCCEEEEEECSBBSSCC--------HHHHHTEEE-EEEEEEEES
T ss_pred cccC--cccCCCcCEEEECCchHHHH--------HHHHHhcCC-CcEEEEEEe
Confidence 3221 11356899999998887654 568899999 999999753
No 196
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.04 E-value=1.8e-09 Score=97.87 Aligned_cols=125 Identities=18% Similarity=0.192 Sum_probs=80.0
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC---------CCCCCCcEEEecccCC-cC
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ---------GLLHKRPIIVRGEDMD-FT 247 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~---------~~~~~~~~~~~~~~~d-l~ 247 (343)
.++++.+|||||||+|.++..+++..+...++++|++......+ +++... +. .++.++.++..+ ++
T Consensus 46 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a--~~~~~~~~~~~~~~~~~--~nv~~~~~D~~~~l~ 121 (246)
T 2vdv_E 46 QMTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYV--EDRIIALRNNTASKHGF--QNINVLRGNAMKFLP 121 (246)
T ss_dssp CBSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHH--HHHHHHHHHTC-CCSTT--TTEEEEECCTTSCGG
T ss_pred cCCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHH--HHHHHHHhhccccccCC--CcEEEEeccHHHHHH
Confidence 45677899999999999999999977655666666666554443 332211 22 256777776655 33
Q ss_pred CCCCCCceeEEEEccccccCCchHH-----------HHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCC
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLV-----------WVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGL 316 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~-----------~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf 316 (343)
.....+.+|.|+... +++.. ..+++++.++|+| ||.+++....... .+.+.+.+...|.
T Consensus 122 ~~~~~~~~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~Lkp-gG~l~~~td~~~~----~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 122 NFFEKGQLSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKE-GGVVYTITDVKDL----HEWMVKHLEEHPL 191 (246)
T ss_dssp GTSCTTCEEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEE-EEEEEEEESCHHH----HHHHHHHHHHSTT
T ss_pred HhccccccCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCC-CCEEEEEeccHHH----HHHHHHHHHhCcC
Confidence 222467899998542 33210 2489999999999 9999986432211 2344555666663
No 197
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.04 E-value=3.2e-10 Score=105.12 Aligned_cols=136 Identities=13% Similarity=0.075 Sum_probs=86.2
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc---CCCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS---QGLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~---~~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
+.+.+|||||||+|.++..+++..+...++++|+|+.....+ ++... .+..+.++.++.++..++... .+++||
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~a--r~~~~~~~~~~~~~rv~v~~~D~~~~l~~-~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYS--KKFLPSIAGKLDDPRVDVQVDDGFMHIAK-SENQYD 150 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHH--HHHCHHHHTTTTSTTEEEEESCSHHHHHT-CCSCEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHH--HHHhHhhccccCCCceEEEECcHHHHHhh-CCCCee
Confidence 346799999999999999998865556777888777655554 33221 133344677777654443211 257899
Q ss_pred EEEEccccccCCch--HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 257 LIYASAVFLHMPDK--LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 257 lIvs~~v~~hl~~~--~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
+|++....++.+.. ....++++++++|+| ||++++.....+........+.+.+++. |..+.
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~p-gG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 214 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKE-DGIFVAQTDNPWFTPELITNVQRDVKEI-FPITK 214 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEE-EEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCC-CcEEEEEcCCccccHHHHHHHHHHHHHh-CCCeE
Confidence 99996554322211 013489999999999 9999887532222111134555667666 66554
No 198
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.04 E-value=1.5e-10 Score=102.16 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.++.+|||||||+|..+..+++.++ ...++++|+++ .+.+.++++.. .+. .+++.++.++..++... .++ ||+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~-~~~v~~~~~d~~~~~~~-~~~-fD~ 129 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDR--DNVEHARRMLHDNGL-IDRVELQVGDPLGIAAG-QRD-IDI 129 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCH--HHHHHHHHHHHHHSG-GGGEEEEESCHHHHHTT-CCS-EEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHCCC-CceEEEEEecHHHHhcc-CCC-CCE
Confidence 3567999999999999999998765 44555555555 44444444322 233 22566776654443212 245 999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
|++.... .+ ...+++++.++||| ||++++.
T Consensus 130 v~~~~~~---~~--~~~~l~~~~~~Lkp-gG~lv~~ 159 (210)
T 3c3p_A 130 LFMDCDV---FN--GADVLERMNRCLAK-NALLIAV 159 (210)
T ss_dssp EEEETTT---SC--HHHHHHHHGGGEEE-EEEEEEE
T ss_pred EEEcCCh---hh--hHHHHHHHHHhcCC-CeEEEEE
Confidence 9987432 22 33489999999999 9999875
No 199
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.03 E-value=4e-10 Score=104.70 Aligned_cols=134 Identities=18% Similarity=0.161 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC--CC-------CCCCcEEEecccCCcCCCC
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ--GL-------LHKRPIIVRGEDMDFTKFG 250 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~--~~-------~~~~~~~~~~~~~dl~~~~ 250 (343)
+++.+|||||||+|.++..+++. +...++++|+|+.....+. +.... ++ ...++.++.++..++...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar--~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSK--DLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHH--HHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHH--HHHhhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45679999999999999999886 6567778877776655553 32211 22 234566666644332211
Q ss_pred CCCceeEEEEccccccCCchH--HHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 251 SGVVYDLIYASAVFLHMPDKL--VWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl~~~~--~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
+++||+|++....+.-+... ...++++++++|+| ||++++.....+........+.+.+++. |..+.
T Consensus 150 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~p-gG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v~ 218 (281)
T 1mjf_A 150 -NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNN-PGIYVTQAGSVYLFTDELISAYKEMKKV-FDRVY 218 (281)
T ss_dssp -CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEE-EEEEEEEEEETTTSHHHHHHHHHHHHHH-CSEEE
T ss_pred -cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCC-CcEEEEEcCCcccCHHHHHHHHHHHHHH-CCceE
Confidence 46899999865542222111 24589999999999 9999887432221110133444455544 55544
No 200
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.03 E-value=2.5e-09 Score=105.84 Aligned_cols=156 Identities=11% Similarity=0.060 Sum_probs=95.6
Q ss_pred CCCccchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCC-CceEEEEcChhHHHHHHHHhccc-CCCCCCCcE
Q 019282 160 GEPWAGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNP-ENFHCLERDELSLMAAFRYELPS-QGLLHKRPI 237 (343)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~-~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~ 237 (343)
.+.+..+......+...+.+.++.+|||+|||+|..+..++...+. ..++++|++ ..+...++++.. .+. .++.
T Consensus 238 ~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s--~~~l~~~~~~~~~~g~--~~v~ 313 (450)
T 2yxl_A 238 EGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVD--KMRMKRLKDFVKRMGI--KIVK 313 (450)
T ss_dssp TTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSC--HHHHHHHHHHHHHTTC--CSEE
T ss_pred CceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCC--HHHHHHHHHHHHHcCC--CcEE
Confidence 4444344444444444567888999999999999999999987754 444555544 454444444332 333 2456
Q ss_pred EEecccCCcCCCCCCCceeEEEE------ccccccCCchHH--------------HHHHHHHHhccCCCCcEEEEEeccc
Q 019282 238 IVRGEDMDFTKFGSGVVYDLIYA------SAVFLHMPDKLV--------------WVGLERLASKLRPYDGRIFVSHNIK 297 (343)
Q Consensus 238 ~~~~~~~dl~~~~~~~~fDlIvs------~~v~~hl~~~~~--------------~~~L~~l~r~LkP~GG~lvi~~~~~ 297 (343)
++.++..++.....++.||+|++ ..++++.++..+ ..+|+++.++||| ||+++++.-.-
T Consensus 314 ~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp-GG~lvy~tcs~ 392 (450)
T 2yxl_A 314 PLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKP-GGRLLYTTCSI 392 (450)
T ss_dssp EECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEE-EEEEEEEESCC
T ss_pred EEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEeCCC
Confidence 66554444332112368999996 344544444211 4589999999999 99998764211
Q ss_pred cccCCCHHHHHHHHHhc-CCcEEEe
Q 019282 298 FCSRLGGEECTKRLTSL-GLEYIGK 321 (343)
Q Consensus 298 ~~~~~~~~~l~~~L~~a-Gf~~v~~ 321 (343)
...-..+.+...+++. ||+.+..
T Consensus 393 -~~~ene~~v~~~l~~~~~~~~~~~ 416 (450)
T 2yxl_A 393 -FKEENEKNIRWFLNVHPEFKLVPL 416 (450)
T ss_dssp -CGGGTHHHHHHHHHHCSSCEECCC
T ss_pred -ChhhHHHHHHHHHHhCCCCEEeec
Confidence 1111256677778776 7876543
No 201
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.03 E-value=5.8e-10 Score=99.32 Aligned_cols=107 Identities=19% Similarity=0.209 Sum_probs=71.1
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcC-----CCceEEEEcChhHHHHHHHHhccc-CCC---CCCCcEEEecccCCcCC
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLN-----PENFHCLERDELSLMAAFRYELPS-QGL---LHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~-----~~~~~vvdid~s~~~~a~a~~~~~-~~~---~~~~~~~~~~~~~dl~~ 248 (343)
.+.++.+|||||||+|.++..+++... ...++++|+++... +.+++... .+. ...++.++.++..+...
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~--~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 154 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLV--NFSLENIKRDKPELLKIDNFKIIHKNIYQVNE 154 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHH--HHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHH--HHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence 578889999999999999999998763 23555666555444 44443322 221 02256666653332110
Q ss_pred --CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 249 --FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 249 --~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
....++||+|++...++++. +++.++||| ||++++...
T Consensus 155 ~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~Lkp-gG~lv~~~~ 194 (227)
T 2pbf_A 155 EEKKELGLFDAIHVGASASELP--------EILVDLLAE-NGKLIIPIE 194 (227)
T ss_dssp HHHHHHCCEEEEEECSBBSSCC--------HHHHHHEEE-EEEEEEEEE
T ss_pred ccCccCCCcCEEEECCchHHHH--------HHHHHhcCC-CcEEEEEEc
Confidence 01246899999999988753 668899999 999998754
No 202
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.03 E-value=5.7e-11 Score=108.05 Aligned_cols=107 Identities=17% Similarity=0.065 Sum_probs=72.2
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCC----C
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFG----S 251 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~----~ 251 (343)
...++.+|||||||+|..+..+++.++ ...++++|+++.....+ +++.. .+. ..++.++.++..++.... .
T Consensus 57 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a--~~~~~~~g~-~~~i~~~~gda~~~l~~~~~~~~ 133 (242)
T 3r3h_A 57 RLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHA--HPYWREAKQ-EHKIKLRLGPALDTLHSLLNEGG 133 (242)
T ss_dssp HHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCS--HHHHHHTTC-TTTEEEEESCHHHHHHHHHHHHC
T ss_pred hhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHH--HHHHHHcCC-CCcEEEEEcCHHHHHHHHhhccC
Confidence 344567999999999999999999775 45666777666544333 33222 333 236777776544432110 0
Q ss_pred CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 252 GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.++||+|++... ......+++++.++||| ||++++.
T Consensus 134 ~~~fD~V~~d~~-----~~~~~~~l~~~~~~Lkp-GG~lv~d 169 (242)
T 3r3h_A 134 EHQFDFIFIDAD-----KTNYLNYYELALKLVTP-KGLIAID 169 (242)
T ss_dssp SSCEEEEEEESC-----GGGHHHHHHHHHHHEEE-EEEEEEE
T ss_pred CCCEeEEEEcCC-----hHHhHHHHHHHHHhcCC-CeEEEEE
Confidence 478999998654 22334589999999999 9999886
No 203
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.02 E-value=3.1e-10 Score=109.79 Aligned_cols=108 Identities=14% Similarity=0.108 Sum_probs=72.3
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.+.++++|||||||||.++..++++ +...+++++.++ +...++++.+.+....++.++.++..++. .+++||+
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~---~~~~a~~~~~~n~~~~~i~~i~~~~~~~~---lpe~~Dv 152 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA---IWQQAREVVRFNGLEDRVHVLPGPVETVE---LPEQVDA 152 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST---THHHHHHHHHHTTCTTTEEEEESCTTTCC---CSSCEEE
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH---HHHHHHHHHHHcCCCceEEEEeeeeeeec---CCccccE
Confidence 3446889999999999999877763 334556666553 34445554443334457888877544443 4578999
Q ss_pred EEEccccccC-CchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 258 IYASAVFLHM-PDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 258 Ivs~~v~~hl-~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
|++-.+-..+ .......++....+.||| ||.++-.
T Consensus 153 ivsE~~~~~l~~e~~l~~~l~a~~r~Lkp-~G~~iP~ 188 (376)
T 4hc4_A 153 IVSEWMGYGLLHESMLSSVLHARTKWLKE-GGLLLPA 188 (376)
T ss_dssp EECCCCBTTBTTTCSHHHHHHHHHHHEEE-EEEEESC
T ss_pred EEeecccccccccchhhhHHHHHHhhCCC-CceECCc
Confidence 9985443333 222455688899999999 9998643
No 204
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.02 E-value=1.2e-10 Score=104.93 Aligned_cols=114 Identities=19% Similarity=0.227 Sum_probs=73.3
Q ss_pred HHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc-CC
Q 019282 172 FLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF-TK 248 (343)
Q Consensus 172 ~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl-~~ 248 (343)
.+.....+.++.+|||||||+|..+..+++.++ ...++++|+++... +.+++... .+. .+++.+..++..+. +.
T Consensus 51 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~--~~a~~~~~~~g~-~~~v~~~~~d~~~~~~~ 127 (239)
T 2hnk_A 51 FLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWT--NVARKYWKENGL-ENKIFLKLGSALETLQV 127 (239)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHH--HHHHHHHHHTTC-GGGEEEEESCHHHHHHH
T ss_pred HHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHH--HHHHHHHHHcCC-CCCEEEEECCHHHHHHH
Confidence 333333455678999999999999999999875 35566666665444 44444322 233 22456666533221 10
Q ss_pred -------------CCCC-CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 249 -------------FGSG-VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 249 -------------~~~~-~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
+..+ ++||+|++.....+ ...+++++.++|+| ||++++..
T Consensus 128 ~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~-----~~~~l~~~~~~L~p-gG~lv~~~ 181 (239)
T 2hnk_A 128 LIDSKSAPSWASDFAFGPSSIDLFFLDADKEN-----YPNYYPLILKLLKP-GGLLIADN 181 (239)
T ss_dssp HHHCSSCCGGGTTTCCSTTCEEEEEECSCGGG-----HHHHHHHHHHHEEE-EEEEEEEC
T ss_pred HHhhcccccccccccCCCCCcCEEEEeCCHHH-----HHHHHHHHHHHcCC-CeEEEEEc
Confidence 1102 68999998754432 33489999999999 99999863
No 205
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.02 E-value=1e-09 Score=100.54 Aligned_cols=146 Identities=8% Similarity=0.026 Sum_probs=98.0
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d 245 (343)
+.+|..+.... .+..+|||||||+|-++..++...+...++++|+|...+... +++.. .+. ...+.. .|
T Consensus 120 D~fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a--~~~l~~~g~---~~~~~v---~D 189 (281)
T 3lcv_B 120 DEFYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFV--DEALTRLNV---PHRTNV---AD 189 (281)
T ss_dssp HHHHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHH--HHHHHHTTC---CEEEEE---CC
T ss_pred HHHHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHH--HHHHHhcCC---CceEEE---ee
Confidence 44556565443 556799999999999999998866778888888888666555 43333 233 222222 35
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccC--CC-----HHHHHHHHHhcCCcE
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSR--LG-----GEECTKRLTSLGLEY 318 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~--~~-----~~~l~~~L~~aGf~~ 318 (343)
+..-.+.++||+|++.-+++|+.+......+ ++.+.|+| +|.+ ++++...... .+ .+.|.+.+.+.|..+
T Consensus 190 ~~~~~p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~-~~vv-VSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 190 LLEDRLDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNS-PNIV-VTFPTKSLGQRSKGMFQNYSQSFESQARERSCRI 266 (281)
T ss_dssp TTTSCCCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSC-SEEE-EEEECC-------CHHHHHHHHHHHHHHHHTCCE
T ss_pred ecccCCCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCC-CCEE-EeccchhhcCCCcchhhHHHHHHHHHHHhcCCce
Confidence 5544467899999999999999777665567 99999999 6655 4443222111 11 667777888899966
Q ss_pred EEeeecc
Q 019282 319 IGKKTHD 325 (343)
Q Consensus 319 v~~~~~~ 325 (343)
.+....+
T Consensus 267 ~~~~~~n 273 (281)
T 3lcv_B 267 QRLEIGN 273 (281)
T ss_dssp EEEEETT
T ss_pred eeeeecC
Confidence 5555433
No 206
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.01 E-value=2e-09 Score=94.30 Aligned_cols=132 Identities=12% Similarity=0.006 Sum_probs=78.6
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
+.+.+.....++++.+|||+|||+|.++..+++. ...++++|+++. . ...++.++.++..+...
T Consensus 13 L~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~--------~------~~~~v~~~~~D~~~~~~ 76 (191)
T 3dou_A 13 LEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM--------E------EIAGVRFIRCDIFKETI 76 (191)
T ss_dssp HHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC--------C------CCTTCEEEECCTTSSSH
T ss_pred HHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc--------c------cCCCeEEEEccccCHHH
Confidence 3343433334678899999999999999999885 334445554431 0 11256666663332210
Q ss_pred CC-----CC----CceeEEEEccccccCCch---------HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHH
Q 019282 249 FG-----SG----VVYDLIYASAVFLHMPDK---------LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKR 310 (343)
Q Consensus 249 ~~-----~~----~~fDlIvs~~v~~hl~~~---------~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~ 310 (343)
.. .. ++||+|++.......+.. .....++.+.++||| ||.|++.... .....++...
T Consensus 77 ~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lkp-GG~lv~k~~~----~~~~~~~~~~ 151 (191)
T 3dou_A 77 FDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRN-GGNVLLKQFQ----GDMTNDFIAI 151 (191)
T ss_dssp HHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEEEC----STHHHHHHHH
T ss_pred HHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC-CCEEEEEEcC----CCCHHHHHHH
Confidence 00 01 489999997654322211 123578889999999 9999886421 1113456666
Q ss_pred HHhcCCcEEEee
Q 019282 311 LTSLGLEYIGKK 322 (343)
Q Consensus 311 L~~aGf~~v~~~ 322 (343)
++ ..|+.+...
T Consensus 152 l~-~~F~~v~~~ 162 (191)
T 3dou_A 152 WR-KNFSSYKIS 162 (191)
T ss_dssp HG-GGEEEEEEE
T ss_pred HH-HhcCEEEEE
Confidence 64 457766644
No 207
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.01 E-value=7.3e-10 Score=103.08 Aligned_cols=137 Identities=17% Similarity=0.141 Sum_probs=84.7
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC---CCCCCCcEEEecccCCcCCCCCCCce
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ---GLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~---~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
.+++.+|||||||+|..+..+++..+...++++|+|+.....+ ++.... +....++.++.++..++... .+++|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a--~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~f 152 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVS--KIYFKNISCGYEDKRVNVFIEDASKFLEN-VTNTY 152 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHH--HHHCTTTSGGGGSTTEEEEESCHHHHHHH-CCSCE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHH--HHHhHHhccccCCCcEEEEECChHHHHHh-CCCCc
Confidence 3456899999999999999998865556777777777655554 332211 11234666666644333211 25689
Q ss_pred eEEEEccccccCCchHH--HHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 256 DLIYASAVFLHMPDKLV--WVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~--~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
|+|++....++.+.... ..+++.++++|+| ||++++.....+........+.+.+++. |..+.
T Consensus 153 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~p-gG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 217 (283)
T 2i7c_A 153 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKP-NGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVE 217 (283)
T ss_dssp EEEEEECCCTTTGGGGGSSHHHHHHHHHHEEE-EEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEE
T ss_pred eEEEEcCCCCCCcchhhhHHHHHHHHHHhcCC-CcEEEEECCCcccCHHHHHHHHHHHHHH-CCceE
Confidence 99999654433232221 4589999999999 9999987432222111133444555554 66554
No 208
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.01 E-value=3.9e-09 Score=97.48 Aligned_cols=127 Identities=16% Similarity=0.111 Sum_probs=81.6
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCce
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
..+.++.+|||+|||+|.++..+++..+...++++|+++..... ++++.+ .++ . ++.++.++..++ .. .+.|
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~--a~~n~~~n~l-~-~~~~~~~d~~~~-~~--~~~~ 187 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHY--LCENIKLNKL-N-NVIPILADNRDV-EL--KDVA 187 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHH--HHHHHHHTTC-S-SEEEEESCGGGC-CC--TTCE
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHH--HHHHHHHcCC-C-CEEEEECChHHc-Cc--cCCc
Confidence 45788899999999999999999987654555666665544444 444333 233 2 456777655554 22 5689
Q ss_pred eEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCC-HHHHHHHHHh-cCCc
Q 019282 256 DLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLG-GEECTKRLTS-LGLE 317 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~-~~~l~~~L~~-aGf~ 317 (343)
|+|++.... .. ..++.++.+.|+| ||.++++.......... ..+..+.+.+ .|++
T Consensus 188 D~Vi~d~p~----~~--~~~l~~~~~~Lkp-gG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (272)
T 3a27_A 188 DRVIMGYVH----KT--HKFLDKTFEFLKD-RGVIHYHETVAEKIMYERPIERLKFYAEKNGYK 244 (272)
T ss_dssp EEEEECCCS----SG--GGGHHHHHHHEEE-EEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEE
T ss_pred eEEEECCcc----cH--HHHHHHHHHHcCC-CCEEEEEEcCccccccccHHHHHHHHHHHhCCe
Confidence 999997654 22 2378999999999 99998875322222112 3344445544 4544
No 209
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.00 E-value=2.7e-09 Score=103.06 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=96.0
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEeccc
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGED 243 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~ 243 (343)
..+.+...+.... ..++.+|||+|||+|.++..++.......++++|+++.+...+ +++.. .++ ..++.+..++.
T Consensus 202 l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A--~~n~~~~gl-~~~i~~~~~D~ 277 (373)
T 3tm4_A 202 LKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGA--EMNALAAGV-LDKIKFIQGDA 277 (373)
T ss_dssp CCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHH--HHHHHHTTC-GGGCEEEECCG
T ss_pred ccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHH--HHHHHHcCC-CCceEEEECCh
Confidence 4566666666666 7788999999999999999999865434667777766555555 44333 333 23567777755
Q ss_pred CCcCCCCCCCceeEEEEccccccCCc------hHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCc
Q 019282 244 MDFTKFGSGVVYDLIYASAVFLHMPD------KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLE 317 (343)
Q Consensus 244 ~dl~~~~~~~~fDlIvs~~v~~hl~~------~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~ 317 (343)
.+++ . .+++||+|+++..+..-.. .....+++.++++| + |+.++++. ..+.+.+.+.+.||+
T Consensus 278 ~~~~-~-~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~-g~~~~i~~--------~~~~~~~~~~~~G~~ 345 (373)
T 3tm4_A 278 TQLS-Q-YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-E-KRGVFITT--------EKKAIEEAIAENGFE 345 (373)
T ss_dssp GGGG-G-TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-E-EEEEEEES--------CHHHHHHHHHHTTEE
T ss_pred hhCC-c-ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-C-CeEEEEEC--------CHHHHHHHHHHcCCE
Confidence 5544 2 3478999999866543211 11245789999989 6 66666654 367788889999999
Q ss_pred EEEee
Q 019282 318 YIGKK 322 (343)
Q Consensus 318 ~v~~~ 322 (343)
.....
T Consensus 346 ~~~~~ 350 (373)
T 3tm4_A 346 IIHHR 350 (373)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87654
No 210
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.99 E-value=1.8e-09 Score=105.15 Aligned_cols=134 Identities=18% Similarity=0.160 Sum_probs=90.7
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc-CCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYL-NPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~-~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d 245 (343)
+.+.+.+.+.+...++.+|||+|||+|.++..+++.. +...++++|+++.....+ .++.++.+ |
T Consensus 25 ~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~~~---D 89 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGILA---D 89 (421)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEEES---C
T ss_pred HHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEEeC---C
Confidence 3456666666665567799999999999999999876 446677888777432111 24555555 4
Q ss_pred cCCCCCCCceeEEEEcccccc----------CCchHH-----------------HHHHHHHHhccCCCCcEEEEEecccc
Q 019282 246 FTKFGSGVVYDLIYASAVFLH----------MPDKLV-----------------WVGLERLASKLRPYDGRIFVSHNIKF 298 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~h----------l~~~~~-----------------~~~L~~l~r~LkP~GG~lvi~~~~~~ 298 (343)
+.++...+.||+|+++-.+.. +.+... ..+++.+.++|+| ||++++..+..+
T Consensus 90 ~~~~~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~-~G~~~~i~p~~~ 168 (421)
T 2ih2_A 90 FLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKP-GGVLVFVVPATW 168 (421)
T ss_dssp GGGCCCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEE-EEEEEEEEEGGG
T ss_pred hhhcCccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCC-CCEEEEEEChHH
Confidence 433434578999999744422 222211 1468999999999 999988765554
Q ss_pred ccCCCHHHHHHHHHhcCC
Q 019282 299 CSRLGGEECTKRLTSLGL 316 (343)
Q Consensus 299 ~~~~~~~~l~~~L~~aGf 316 (343)
...-..+.+++.+.+.|+
T Consensus 169 l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 169 LVLEDFALLREFLAREGK 186 (421)
T ss_dssp GTCGGGHHHHHHHHHHSE
T ss_pred hcCccHHHHHHHHHhcCC
Confidence 433335678888888887
No 211
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.99 E-value=6.1e-10 Score=106.18 Aligned_cols=113 Identities=22% Similarity=0.225 Sum_probs=74.7
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc---CCCCCCCcEEEecccCCc-CCCCCCCc
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS---QGLLHKRPIIVRGEDMDF-TKFGSGVV 254 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~---~~~~~~~~~~~~~~~~dl-~~~~~~~~ 254 (343)
.+++.+|||||||+|..+..+++..+...++++|+|+.....+ ++... .++...++.++.++..++ ... .+++
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~A--r~~~~~~~~gl~~~rv~~~~~D~~~~l~~~-~~~~ 194 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVS--KQFFPDVAIGYEDPRVNLVIGDGVAFLKNA-AEGS 194 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHH--HHHCHHHHGGGGSTTEEEEESCHHHHHHTS-CTTC
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHH--HHHHHhhccccCCCcEEEEECCHHHHHHhc-cCCC
Confidence 4566899999999999999999865556677777776555544 43321 123234677777654443 212 2468
Q ss_pred eeEEEEccccccCCch--HHHHHHHHHHhccCCCCcEEEEEec
Q 019282 255 YDLIYASAVFLHMPDK--LVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~--~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
||+|++...-.+-+.. ....+++.++++|+| ||++++...
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~~~ 236 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRP-GGVVCTQAE 236 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEE-EEEEEEECC
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCC-CcEEEEecC
Confidence 9999996542111111 124589999999999 999998743
No 212
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.99 E-value=2.5e-09 Score=98.66 Aligned_cols=115 Identities=15% Similarity=0.074 Sum_probs=72.3
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC-CCCCCCcEEE--ecccC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ-GLLHKRPIIV--RGEDM 244 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~-~~~~~~~~~~--~~~~~ 244 (343)
..+..+.+...++++.+|||||||+|.++..+++. ..++++|+++ +...+++.... .....++.++ .+
T Consensus 61 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~---m~~~a~~~~~~~~~~~~~v~~~~~~~--- 131 (265)
T 2oxt_A 61 AKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT---LGVGGHEVPRITESYGWNIVKFKSRV--- 131 (265)
T ss_dssp HHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC---CCCSSCCCCCCCCBTTGGGEEEECSC---
T ss_pred HHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch---hhhhhhhhhhhhhccCCCeEEEeccc---
Confidence 34455555566778899999999999999998875 4556666655 21111111000 0001145555 44
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHH-----HHHHHHHHhccCCCCc--EEEEEe
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLV-----WVGLERLASKLRPYDG--RIFVSH 294 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~-----~~~L~~l~r~LkP~GG--~lvi~~ 294 (343)
|+.+++ +++||+|+|..+ ++.+.... ..+|+.+.++||| || .+++..
T Consensus 132 D~~~l~-~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~Lkp-GG~~~fv~kv 185 (265)
T 2oxt_A 132 DIHTLP-VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVK-NPSADFVVKV 185 (265)
T ss_dssp CTTTSC-CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEE
T ss_pred CHhHCC-CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhcc-CCCeEEEEEe
Confidence 444443 578999999877 55444321 1278999999999 99 888854
No 213
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.98 E-value=8.6e-10 Score=104.54 Aligned_cols=136 Identities=17% Similarity=0.146 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC---CCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ---GLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~---~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
+++.+|||||||+|.++..+++..+...++++|+|+.....+ ++.... +....++.++.++..++... .+++||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~a--r~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVS--KIYFKNISCGYEDKRVNVFIEDASKFLEN-VTNTYD 191 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHH--HHHCTTTSGGGGSTTEEEEESCHHHHHHH-CCSCEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHH--HHHHHhhccccCCCcEEEEEccHHHHHhh-cCCCce
Confidence 456799999999999999998865556677777777655554 333221 12134666776643332211 246899
Q ss_pred EEEEccccccCCchHH--HHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 257 LIYASAVFLHMPDKLV--WVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 257 lIvs~~v~~hl~~~~~--~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
+|++...-..-+.... ..++++++++|+| ||++++.....+........+.+.+++. |..+.
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 255 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYEKIYNALKP-NGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKVE 255 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHHHHHHHEEE-EEEEEEEECCTTTCHHHHHHHHHHHHTT-CSEEE
T ss_pred EEEECCcCCCCcchhhhHHHHHHHHHHhcCC-CcEEEEEcCCcccCHHHHHHHHHHHHHH-CCCeE
Confidence 9998653211111111 4589999999999 9999987533322111134445555555 55544
No 214
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.98 E-value=4.1e-10 Score=100.37 Aligned_cols=107 Identities=15% Similarity=0.065 Sum_probs=71.4
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC-CCCCC--
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT-KFGSG-- 252 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~-~~~~~-- 252 (343)
...++.+|||||||+|..+..+++.++ ...++++|+++.....+ ++... .+. ..++.++.++..+.. .+...
T Consensus 66 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a--~~~~~~~g~-~~~i~~~~~d~~~~~~~~~~~~~ 142 (229)
T 2avd_A 66 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELG--RPLWRQAEA-EHKIDLRLKPALETLDELLAAGE 142 (229)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHH--HHHHHHTTC-TTTEEEEESCHHHHHHHHHHTTC
T ss_pred HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHH--HHHHHHCCC-CCeEEEEEcCHHHHHHHHHhcCC
Confidence 445678999999999999999998765 45666666666554444 43322 333 235667766433321 11111
Q ss_pred -CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 253 -VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 -~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
++||+|++... ......+++++.++|+| ||.+++.
T Consensus 143 ~~~~D~v~~d~~-----~~~~~~~l~~~~~~L~p-gG~lv~~ 178 (229)
T 2avd_A 143 AGTFDVAVVDAD-----KENCSAYYERCLQLLRP-GGILAVL 178 (229)
T ss_dssp TTCEEEEEECSC-----STTHHHHHHHHHHHEEE-EEEEEEE
T ss_pred CCCccEEEECCC-----HHHHHHHHHHHHHHcCC-CeEEEEE
Confidence 68999999654 22234489999999999 9999886
No 215
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.98 E-value=5.5e-10 Score=105.63 Aligned_cols=135 Identities=16% Similarity=0.126 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC---CCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ---GLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~---~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
+++.+|||||||+|..+..+++..+...++++|+|+... +.+++.... +....++.++.++..++... .+++||
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i--~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVI--DVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFD 183 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHH--HHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHH--HHHHHHHHHhccccCCCCEEEEEChHHHHHHh-cCCCce
Confidence 345799999999999999998865555666666666544 444443221 22234666776644332211 356899
Q ss_pred EEEEccccccCCc-hHH--HHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 257 LIYASAVFLHMPD-KLV--WVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 257 lIvs~~v~~hl~~-~~~--~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
+|++...- ++.. ... ..+++.++++|+| ||++++.....+........+.+.+++. |..+.
T Consensus 184 ~Ii~d~~~-~~~~~~~l~t~~~l~~~~~~Lkp-gG~lv~~~~~~~~~~~~~~~~~~~l~~v-F~~v~ 247 (314)
T 2b2c_A 184 VIITDSSD-PVGPAESLFGQSYYELLRDALKE-DGILSSQGESVWLHLPLIAHLVAFNRKI-FPAVT 247 (314)
T ss_dssp EEEECCC--------------HHHHHHHHEEE-EEEEEEECCCTTTCHHHHHHHHHHHHHH-CSEEE
T ss_pred EEEEcCCC-CCCcchhhhHHHHHHHHHhhcCC-CeEEEEECCCcccCHHHHHHHHHHHHHH-CCcce
Confidence 99986543 3322 211 4689999999999 9999987533322111133444555544 55443
No 216
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.98 E-value=1.9e-09 Score=101.92 Aligned_cols=108 Identities=13% Similarity=0.010 Sum_probs=73.0
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEcc
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASA 262 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~ 262 (343)
.+|||||||+|.++..+++.++...++++++|+.....+ ++.... ....++.++.++..++..-..+++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~A--r~~~~~-~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLS--REWFDI-PRAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHH--HHHSCC-CCTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHH--HHhccc-cCCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 499999999999999999977767777777777555444 443321 12346677776544442111357899999864
Q ss_pred ccccCCchH--HHHHHHHHHhccCCCCcEEEEEe
Q 019282 263 VFLHMPDKL--VWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 263 v~~hl~~~~--~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
..+...... ...+++.++++|+| ||++++..
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~Lkp-gGvlv~~~ 200 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAP-GGLYVANC 200 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEE-EEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCC-CcEEEEEe
Confidence 433221111 13589999999999 99998875
No 217
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.97 E-value=4.9e-10 Score=104.06 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=71.9
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEE--ecccCC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIV--RGEDMD 245 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~--~~~~~d 245 (343)
.+..+.+...++++.+|||||||+|.++..+++. ..++++|+++ +...+++... ......++.++ .+ |
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~---m~~~a~~~~~~~~~~~~~v~~~~~~~---D 140 (276)
T 2wa2_A 70 KLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT---LGTSGHEKPRLVETFGWNLITFKSKV---D 140 (276)
T ss_dssp HHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC---CCCTTSCCCCCCCCTTGGGEEEECSC---C
T ss_pred HHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch---hhhhhhhchhhhhhcCCCeEEEeccC---c
Confidence 4455555556778899999999999999999885 4556666655 2221111110 00011145556 44 4
Q ss_pred cCCCCCCCceeEEEEccccccCCchHH-----HHHHHHHHhccCCCCc--EEEEEe
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLV-----WVGLERLASKLRPYDG--RIFVSH 294 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~-----~~~L~~l~r~LkP~GG--~lvi~~ 294 (343)
+.+++ +++||+|+|..+ ++.+.+.. ..+|+.+.++||| || .+++..
T Consensus 141 ~~~l~-~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~Lkp-GG~~~~v~~~ 193 (276)
T 2wa2_A 141 VTKME-PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEY-NQGCGFCVKV 193 (276)
T ss_dssp GGGCC-CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHH-STTCEEEEEE
T ss_pred HhhCC-CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhcc-CCCcEEEEEe
Confidence 44343 578999999877 45443221 1378999999999 99 888753
No 218
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.97 E-value=5.3e-10 Score=101.14 Aligned_cols=106 Identities=13% Similarity=0.072 Sum_probs=71.4
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcC-CCC----C
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFT-KFG----S 251 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~-~~~----~ 251 (343)
..++.+|||||||+|..+..+++.++ ...++++|+++.. .+.++++.. .+. .+++.++.++..++. .+. .
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~--~~~a~~~~~~~g~-~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREA--YEIGLPFIRKAGV-EHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHH--HHHHHHHHHHTTC-GGGEEEEESCHHHHHHHHHHSTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHH--HHHHHHHHHHcCC-CCcEEEEEcCHHHHHHHHHhccCC
Confidence 34567999999999999999999876 4555566655544 444444333 344 335667766544431 110 1
Q ss_pred CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 252 GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.++||+|++.... .....+++.+.++|+| ||++++.
T Consensus 145 ~~~fD~I~~d~~~-----~~~~~~l~~~~~~L~p-GG~lv~d 180 (237)
T 3c3y_A 145 EGSYDFGFVDADK-----PNYIKYHERLMKLVKV-GGIVAYD 180 (237)
T ss_dssp TTCEEEEEECSCG-----GGHHHHHHHHHHHEEE-EEEEEEE
T ss_pred CCCcCEEEECCch-----HHHHHHHHHHHHhcCC-CeEEEEe
Confidence 4689999986432 2334589999999999 9999876
No 219
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.97 E-value=1.3e-09 Score=102.86 Aligned_cols=136 Identities=14% Similarity=0.139 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc---CC-CCCCCcEEEecccCCcCCCCCCCce
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS---QG-LLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~---~~-~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
+++.+|||||||+|.++..+++..+...++++|+|+.....+ ++... .+ ....++.++.++..++... .+++|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a--r~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~f 152 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVA--KRHMPEWHQGAFDDPRAVLVIDDARAYLER-TEERY 152 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHH--HHHCHHHHTTGGGCTTEEEEESCHHHHHHH-CCCCE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHH--HHHhHhhccccccCCceEEEEchHHHHHHh-cCCCc
Confidence 456799999999999999998865556677777777555544 33221 12 2234667776644443211 25689
Q ss_pred eEEEEcccccc---CCchH--HHHHHHHHHhccCCCCcEEEEEecccc-ccCCCHHHHHHHHHhcCCcEEE
Q 019282 256 DLIYASAVFLH---MPDKL--VWVGLERLASKLRPYDGRIFVSHNIKF-CSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 256 DlIvs~~v~~h---l~~~~--~~~~L~~l~r~LkP~GG~lvi~~~~~~-~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
|+|++....++ -+... ...++++++++||| ||++++.....+ ...-....+.+.+++. |..+.
T Consensus 153 D~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 221 (314)
T 1uir_A 153 DVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNP-GGVMGMQTGMILLTHHRVHPVVHRTVREA-FRYVR 221 (314)
T ss_dssp EEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEE-EEEEEEEEEEECC---CHHHHHHHHHHTT-CSEEE
T ss_pred cEEEECCCCcccccCcchhccHHHHHHHHHHhcCC-CcEEEEEccCccccCHHHHHHHHHHHHHH-CCceE
Confidence 99999766544 11111 24589999999999 999998743322 1111144555666665 55443
No 220
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.97 E-value=9.2e-09 Score=89.75 Aligned_cols=130 Identities=8% Similarity=-0.002 Sum_probs=77.3
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
..++..+... ...++.+|||+|||+|.++..+++. +...++++|+++ .+.+.++++.. ++.++.++..+
T Consensus 38 ~~l~~~~~~~-~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~--~~~~~a~~~~~------~~~~~~~d~~~- 106 (200)
T 1ne2_A 38 AYFLIEIYND-GNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDP--DAIETAKRNCG------GVNFMVADVSE- 106 (200)
T ss_dssp HHHHHHHHHH-TSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCH--HHHHHHHHHCT------TSEEEECCGGG-
T ss_pred HHHHHHHHhc-CCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCH--HHHHHHHHhcC------CCEEEECcHHH-
Confidence 4455444432 4567789999999999999999875 323355555555 44444444221 45666653333
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEe
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~ 321 (343)
++ ++||+|+++..++|........+++++.+.+ |+ +++..+. ...+.+.+.+.+.| +....
T Consensus 107 --~~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~---g~-~~~~~~~-----~~~~~~~~~~~~~g-~~~~~ 167 (200)
T 1ne2_A 107 --IS--GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS---MW-IYSIGNA-----KARDFLRREFSARG-DVFRE 167 (200)
T ss_dssp --CC--CCEEEEEECCCC-------CHHHHHHHHHHE---EE-EEEEEEG-----GGHHHHHHHHHHHE-EEEEE
T ss_pred --CC--CCeeEEEECCCchhccCchhHHHHHHHHHhc---Cc-EEEEEcC-----chHHHHHHHHHHCC-CEEEE
Confidence 32 6899999999999887643345788888776 34 4444321 12456777888888 54443
No 221
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.97 E-value=3.7e-09 Score=100.80 Aligned_cols=131 Identities=15% Similarity=0.120 Sum_probs=89.4
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCC-----CceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCC
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNP-----ENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGS 251 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~-----~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~ 251 (343)
...++.+|||+|||+|.++..+++.++. ..++++|+++.....+ +.... .+. ...+..++... ...
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a--~~n~~~~g~---~~~i~~~D~l~---~~~ 198 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLA--LVGADLQRQ---KMTLLHQDGLA---NLL 198 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHH--HHHHHHHTC---CCEEEESCTTS---CCC
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHH--HHHHHhCCC---CceEEECCCCC---ccc
Confidence 3456789999999999999999887643 3456666666555444 33222 233 34566553332 223
Q ss_pred CCceeEEEEccccccCCchHH----------------HHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcC
Q 019282 252 GVVYDLIYASAVFLHMPDKLV----------------WVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLG 315 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~----------------~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aG 315 (343)
.+.||+|+++..+.+++.... ..+++++.+.|+| ||++++..+..+...-....+++.|.+.|
T Consensus 199 ~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~-gG~~~~v~p~~~~~~~~~~~ir~~l~~~~ 277 (344)
T 2f8l_A 199 VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKP-GGYLFFLVPDAMFGTSDFAKVDKFIKKNG 277 (344)
T ss_dssp CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEE-EEEEEEEEEGGGGGSTTHHHHHHHHHHHE
T ss_pred cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCC-CCEEEEEECchhcCCchHHHHHHHHHhCC
Confidence 568999999988776654331 1479999999999 99998876444444444788889998888
Q ss_pred Cc
Q 019282 316 LE 317 (343)
Q Consensus 316 f~ 317 (343)
+.
T Consensus 278 ~~ 279 (344)
T 2f8l_A 278 HI 279 (344)
T ss_dssp EE
T ss_pred eE
Confidence 73
No 222
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.96 E-value=5.4e-09 Score=102.78 Aligned_cols=158 Identities=12% Similarity=0.076 Sum_probs=97.9
Q ss_pred hccCCCccchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCc
Q 019282 157 SNYGEPWAGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRP 236 (343)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~ 236 (343)
.|..+.+..+......+...+...++.+|||+|||+|..+.++++..+...++++|+++........+ ....+. .+
T Consensus 222 ~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~-~~~~g~---~~ 297 (429)
T 1sqg_A 222 GFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN-LKRLGM---KA 297 (429)
T ss_dssp TGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHH-HHHTTC---CC
T ss_pred HHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-HHHcCC---Ce
Confidence 33344444444455555555678889999999999999999999987666677777777655544322 122333 34
Q ss_pred EEEecccCCcCCCCCCCceeEEEEc------cccccCCchH--------------HHHHHHHHHhccCCCCcEEEEEecc
Q 019282 237 IIVRGEDMDFTKFGSGVVYDLIYAS------AVFLHMPDKL--------------VWVGLERLASKLRPYDGRIFVSHNI 296 (343)
Q Consensus 237 ~~~~~~~~dl~~~~~~~~fDlIvs~------~v~~hl~~~~--------------~~~~L~~l~r~LkP~GG~lvi~~~~ 296 (343)
.++.++..++.....++.||+|++. .++++.++.. ...+|+++.++||| ||+++++.-.
T Consensus 298 ~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp-GG~lvystcs 376 (429)
T 1sqg_A 298 TVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT-GGTLVYATCS 376 (429)
T ss_dssp EEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE-EEEEEEEESC
T ss_pred EEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEECC
Confidence 5555533333211124689999962 3444444421 13589999999999 9999886421
Q ss_pred ccccCCCHHHHHHHHHhc-CCcEEE
Q 019282 297 KFCSRLGGEECTKRLTSL-GLEYIG 320 (343)
Q Consensus 297 ~~~~~~~~~~l~~~L~~a-Gf~~v~ 320 (343)
....-..+.+...+++. +|+.+.
T Consensus 377 -~~~~ene~~v~~~l~~~~~~~~~~ 400 (429)
T 1sqg_A 377 -VLPEENSLQIKAFLQRTADAELCE 400 (429)
T ss_dssp -CCGGGTHHHHHHHHHHCTTCEECS
T ss_pred -CChhhHHHHHHHHHHhCCCCEEeC
Confidence 11111256677777765 676643
No 223
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.96 E-value=2.5e-10 Score=102.80 Aligned_cols=106 Identities=18% Similarity=0.138 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCc-CCCCC-C--
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDF-TKFGS-G-- 252 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl-~~~~~-~-- 252 (343)
..++.+|||||||+|..+..+++.++ ...++++|+++. +.+.+++... .+. ..++.++.++..+. +.+.. +
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~--~~~~a~~~~~~~g~-~~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPN--ATAIAKKYWQKAGV-AEKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH--HHHHHHHHHHHHTC-GGGEEEEESCHHHHHHHHHTSSSC
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHH--HHHHHHHHHHHcCC-CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 34567999999999999999998775 345555555554 4444443322 233 22566666643322 11111 2
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
++||+|++.... .....+++++.++|+| ||++++.
T Consensus 147 ~~fD~V~~d~~~-----~~~~~~l~~~~~~Lkp-gG~lv~~ 181 (232)
T 3cbg_A 147 PEFDLIFIDADK-----RNYPRYYEIGLNLLRR-GGLMVID 181 (232)
T ss_dssp CCEEEEEECSCG-----GGHHHHHHHHHHTEEE-EEEEEEE
T ss_pred CCcCEEEECCCH-----HHHHHHHHHHHHHcCC-CeEEEEe
Confidence 689999987542 2334589999999999 9999886
No 224
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.96 E-value=4.5e-09 Score=99.65 Aligned_cols=146 Identities=12% Similarity=0.071 Sum_probs=74.6
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhcccC--------CC--CCCCcE
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPSQ--------GL--LHKRPI 237 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~~--------~~--~~~~~~ 237 (343)
....+...+.+.++.+|||+|||+|.++..+++..+ ...++++|+++.....+ +++... +. ...++.
T Consensus 93 ~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a--~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 93 DINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLA--KKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHH--HHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHH--HHHHHHhhcccccccccccCCceE
Confidence 345555566888999999999999999999998753 35566666666555444 332221 11 113566
Q ss_pred EEecccCCcC-CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc----------------c--
Q 019282 238 IVRGEDMDFT-KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK----------------F-- 298 (343)
Q Consensus 238 ~~~~~~~dl~-~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~----------------~-- 298 (343)
+..++..+.. .+ .++.||+|++.. +.+.. .++++.++||| ||++++..... +
T Consensus 171 ~~~~d~~~~~~~~-~~~~fD~V~~~~-----~~~~~--~l~~~~~~Lkp-gG~lv~~~~~~~~~~~~~~~l~~~~~~~~~ 241 (336)
T 2b25_A 171 FIHKDISGATEDI-KSLTFDAVALDM-----LNPHV--TLPVFYPHLKH-GGVCAVYVVNITQVIELLDGIRTCELALSC 241 (336)
T ss_dssp EEESCTTCCC--------EEEEEECS-----SSTTT--THHHHGGGEEE-EEEEEEEESSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEECChHHccccc-CCCCeeEEEECC-----CCHHH--HHHHHHHhcCC-CcEEEEEeCCHHHHHHHHHHHHhcCCCccc
Confidence 6666444432 12 346899999853 33333 78999999999 99998762100 0
Q ss_pred ---c----cCCC-------HHHHHHHHHhcCCcEEEeeecc
Q 019282 299 ---C----SRLG-------GEECTKRLTSLGLEYIGKKTHD 325 (343)
Q Consensus 299 ---~----~~~~-------~~~l~~~L~~aGf~~v~~~~~~ 325 (343)
. ..+. ..++...|+++||++++.....
T Consensus 242 ~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~~ 282 (336)
T 2b25_A 242 EKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQE 282 (336)
T ss_dssp EEEECCCCCCEEECC--------------------------
T ss_pred ceEEEecccceEEEeecccccchhhhhcccccccccccccc
Confidence 0 0000 1267778889999888766554
No 225
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.96 E-value=9e-10 Score=103.17 Aligned_cols=136 Identities=16% Similarity=0.073 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc---CCCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS---QGLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~---~~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
+++.+|||||||+|..+..+++..+...++++|+|+.....+ ++... .+....++.++.++..++... .+++||
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a--~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~fD 165 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAA--RKYLKQTSCGFDDPRAEIVIANGAEYVRK-FKNEFD 165 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHH--HHHCHHHHGGGGCTTEEEEESCHHHHGGG-CSSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHH--HHHhHhhccccCCCceEEEECcHHHHHhh-CCCCce
Confidence 345799999999999999999865556677777777655554 33221 122234667776644433211 246899
Q ss_pred EEEEccccccCCch---HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 257 LIYASAVFLHMPDK---LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 257 lIvs~~v~~hl~~~---~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
+|++....+++... ....++++++++||| ||++++.....+........+.+.+++. |..+.
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 230 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKE-DGVFSAETEDPFYDIGWFKLAYRRISKV-FPITR 230 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEE-EEEEEEECCCTTTTHHHHHHHHHHHHHH-CSEEE
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCC-CcEEEEEccCcccCHHHHHHHHHHHHHH-CCceE
Confidence 99985432212111 113589999999999 9999987432222111134555666666 55544
No 226
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.94 E-value=1e-09 Score=102.15 Aligned_cols=115 Identities=15% Similarity=0.197 Sum_probs=72.9
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
...+.+.+.+.+.+.++.+|||||||+|.++..+++.. ..++++|+|+.. .+.+++... .+. ..++.++.++..
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~--~~~a~~~~~~~~~-~~~v~~~~~D~~ 87 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRL--VAELHKRVQGTPV-ASKLQVLVGDVL 87 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHH--HHHHHHHHTTSTT-GGGEEEEESCTT
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHH--HHHHHHHHHhcCC-CCceEEEEccee
Confidence 45677788888888889999999999999999999863 345566655544 444444322 121 125666766443
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHH--------------HH--HhccCCCCcEEE
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLE--------------RL--ASKLRPYDGRIF 291 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~--------------~l--~r~LkP~GG~lv 291 (343)
++ +. ..||+|+++..++. ..+....+++ ++ +++++| ||.++
T Consensus 88 ~~---~~-~~fD~vv~nlpy~~-~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkP-Gg~~y 144 (285)
T 1zq9_A 88 KT---DL-PFFDTCVANLPYQI-SSPFVFKLLLHRPFFRCAILMFQREFALRLVAKP-GDKLY 144 (285)
T ss_dssp TS---CC-CCCSEEEEECCGGG-HHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCT-TCTTC
T ss_pred cc---cc-hhhcEEEEecCccc-chHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCC-CCccc
Confidence 33 22 27999999765533 2222222332 22 368999 99775
No 227
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.93 E-value=7.8e-10 Score=104.05 Aligned_cols=113 Identities=18% Similarity=0.171 Sum_probs=72.7
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc---CCCCCCCcEEEecccCCcCCCCCCCce
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS---QGLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~---~~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
.+++.+|||||||+|..+..+++..+...++++|+|+.....+ ++... .++...++.++.++..++... .+++|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a--r~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~f 169 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVS--KKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-NQDAF 169 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHH--HHHCHHHHGGGGCTTEEEEESCHHHHHHT-CSSCE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHH--HHHhHHhhcccCCCcEEEEECcHHHHHhh-CCCCc
Confidence 3456899999999999999998865556677777777655554 33221 122234667776644443211 35789
Q ss_pred eEEEEccccccCCch--HHHHHHHHHHhccCCCCcEEEEEec
Q 019282 256 DLIYASAVFLHMPDK--LVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 256 DlIvs~~v~~hl~~~--~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
|+|++....+..+.. ....++++++++|+| ||++++...
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~~~ 210 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKE-DGVLCCQGE 210 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEE-EEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCC-CeEEEEecC
Confidence 999996544322211 123489999999999 999998753
No 228
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.93 E-value=1.6e-09 Score=100.04 Aligned_cols=140 Identities=14% Similarity=0.079 Sum_probs=85.8
Q ss_pred hcCCCCCCeEEEEcCCcCHHHHHHHHHcCC-CceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCC--C
Q 019282 176 ASHITPNSHVLEIGCGTLRVGVHFIRYLNP-ENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFG--S 251 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCGtG~~a~~la~~~~~-~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~--~ 251 (343)
.+.+.++.+|||+|||+|..+..+++..+. ..++++|++......+ +++.. .+.. ++.++.++..++.... .
T Consensus 78 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~--~~~~~~~g~~--~v~~~~~D~~~~~~~~~~~ 153 (274)
T 3ajd_A 78 VLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKAL--KSNINRMGVL--NTIIINADMRKYKDYLLKN 153 (274)
T ss_dssp HHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHH--HHHHHHTTCC--SEEEEESCHHHHHHHHHHT
T ss_pred HhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHH--HHHHHHhCCC--cEEEEeCChHhcchhhhhc
Confidence 356788999999999999999999987654 5566666666554443 33322 3332 4566665433332100 1
Q ss_pred CCceeEEEEccccccCCc----------------hHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhc-
Q 019282 252 GVVYDLIYASAVFLHMPD----------------KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSL- 314 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~----------------~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~a- 314 (343)
.+.||+|++...+...+- .....+|+++.++||| ||+++++.-. ....-..+.+...+++.
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~lv~stcs-~~~~ene~~v~~~l~~~~ 231 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK-DGELVYSTCS-MEVEENEEVIKYILQKRN 231 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE-EEEEEEEESC-CCTTSSHHHHHHHHHHCS
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEEECC-CChHHhHHHHHHHHHhCC
Confidence 468999998633221110 1124589999999999 9999886421 11112256666667554
Q ss_pred CCcEEEe
Q 019282 315 GLEYIGK 321 (343)
Q Consensus 315 Gf~~v~~ 321 (343)
+|+.+..
T Consensus 232 ~~~~~~~ 238 (274)
T 3ajd_A 232 DVELIII 238 (274)
T ss_dssp SEEEECC
T ss_pred CcEEecC
Confidence 6776554
No 229
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.93 E-value=1.7e-08 Score=88.40 Aligned_cols=128 Identities=13% Similarity=0.005 Sum_probs=81.5
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
...++.+|||+|||+|.++..+++. +...++++|+++... +.++++.. .+. ++.++.++..+ + ++.||
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~--~~a~~~~~~~~~---~~~~~~~d~~~---~--~~~~D 114 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAV--DVLIENLGEFKG---KFKVFIGDVSE---F--NSRVD 114 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHH--HHHHHHTGGGTT---SEEEEESCGGG---C--CCCCS
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHH--HHHHHHHHHcCC---CEEEEECchHH---c--CCCCC
Confidence 4567889999999999999999875 223456666655444 44444332 222 45666653333 3 24899
Q ss_pred EEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 257 LIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 257 lIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
+|+++..+++........+++++.+++ ||.+++..... -..+.+.+.+++.||+......
T Consensus 115 ~v~~~~p~~~~~~~~~~~~l~~~~~~l---~~~~~~~~~~~----~~~~~~~~~l~~~g~~~~~~~~ 174 (207)
T 1wy7_A 115 IVIMNPPFGSQRKHADRPFLLKAFEIS---DVVYSIHLAKP----EVRRFIEKFSWEHGFVVTHRLT 174 (207)
T ss_dssp EEEECCCCSSSSTTTTHHHHHHHHHHC---SEEEEEEECCH----HHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEcCCCccccCCchHHHHHHHHHhc---CcEEEEEeCCc----CCHHHHHHHHHHCCCeEEEEEE
Confidence 999999887775444445788888887 35444331100 1145567788999998765443
No 230
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.90 E-value=1.6e-08 Score=99.45 Aligned_cols=137 Identities=12% Similarity=0.132 Sum_probs=86.0
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
.+.+++.+.+ +.++.+|||+|||+|.++..+++. ... ++++|.++.+.+.++++.. .++ . +.++.++..
T Consensus 278 ~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~--~~~--V~gvD~s~~ai~~A~~n~~~ngl--~-v~~~~~d~~ 347 (425)
T 2jjq_A 278 AVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR--GFN--VKGFDSNEFAIEMARRNVEINNV--D-AEFEVASDR 347 (425)
T ss_dssp HHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT--TCE--EEEEESCHHHHHHHHHHHHHHTC--C-EEEEECCTT
T ss_pred HHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc--CCE--EEEEECCHHHHHHHHHHHHHcCC--c-EEEEECChH
Confidence 3445555554 567889999999999999999884 234 4445555555555554433 233 1 566666444
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeeec
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKTH 324 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~~ 324 (343)
++. .. .||+|++......... .+++.+. .|+| ||.++++.+ +..+...+....|+.......
T Consensus 348 ~~~---~~-~fD~Vv~dPPr~g~~~----~~~~~l~-~l~p-~givyvsc~--------p~tlarDl~~l~y~l~~~~~~ 409 (425)
T 2jjq_A 348 EVS---VK-GFDTVIVDPPRAGLHP----RLVKRLN-REKP-GVIVYVSCN--------PETFARDVKMLDYRIDEIVAL 409 (425)
T ss_dssp TCC---CT-TCSEEEECCCTTCSCH----HHHHHHH-HHCC-SEEEEEESC--------HHHHHHHHHHSSCCEEEEEEE
T ss_pred HcC---cc-CCCEEEEcCCccchHH----HHHHHHH-hcCC-CcEEEEECC--------hHHHHhHHhhCeEEEEEEEEE
Confidence 432 22 8999999654322221 1455554 4999 999999853 333333333333999898999
Q ss_pred cccccc
Q 019282 325 DSLLFN 330 (343)
Q Consensus 325 ~~l~~~ 330 (343)
|.+++.
T Consensus 410 DmFP~T 415 (425)
T 2jjq_A 410 DMFPHT 415 (425)
T ss_dssp CCSTTS
T ss_pred CcCCCC
Confidence 988864
No 231
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.89 E-value=2e-09 Score=104.42 Aligned_cols=110 Identities=15% Similarity=0.145 Sum_probs=75.0
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCC------cCHHHHHHHHH-cCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEE
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCG------TLRVGVHFIRY-LNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIV 239 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCG------tG~~a~~la~~-~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~ 239 (343)
...++.+..... .++.+||||||| +|..+..+++. ++...++++|+++.+ . . ...++.++
T Consensus 203 ~~~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m--~---~-------~~~rI~fv 269 (419)
T 3sso_A 203 TPHYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS--H---V-------DELRIRTI 269 (419)
T ss_dssp HHHHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG--G---G-------CBTTEEEE
T ss_pred HHHHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH--h---h-------cCCCcEEE
Confidence 456666665443 346799999999 77777777654 466667777776643 1 1 12367777
Q ss_pred ecccCCcCCCC-----CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 240 RGEDMDFTKFG-----SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 240 ~~~~~dl~~~~-----~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
.++..+++ +. .+++||+|++.. .|+..+. ...|++++++||| ||++++.+
T Consensus 270 ~GDa~dlp-f~~~l~~~d~sFDlVisdg-sH~~~d~--~~aL~el~rvLKP-GGvlVi~D 324 (419)
T 3sso_A 270 QGDQNDAE-FLDRIARRYGPFDIVIDDG-SHINAHV--RTSFAALFPHVRP-GGLYVIED 324 (419)
T ss_dssp ECCTTCHH-HHHHHHHHHCCEEEEEECS-CCCHHHH--HHHHHHHGGGEEE-EEEEEEEC
T ss_pred Eecccccc-hhhhhhcccCCccEEEECC-cccchhH--HHHHHHHHHhcCC-CeEEEEEe
Confidence 77555543 21 147899999975 4555443 4599999999999 99999973
No 232
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.87 E-value=6.1e-09 Score=95.91 Aligned_cols=99 Identities=15% Similarity=0.119 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC---CCCCCCcEEEecccCCcCCCCCCCcee
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ---GLLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~---~~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
+.+.+|||||||+|.++..+++. + ..++++|+|+ .+.+.+++.... +..+.++.++.++..+ +. ++||
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~--~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~---~~--~~fD 141 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADE--KILDSFISFFPHFHEVKNNKNFTHAKQLLDL---DI--KKYD 141 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCH--HHHGGGTTTSTTHHHHHTCTTEEEESSGGGS---CC--CCEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCH--HHHHHHHHHHHhhccccCCCeEEEEechHHH---HH--hhCC
Confidence 44579999999999999999886 5 5556666555 445444443211 1223356666554333 32 6899
Q ss_pred EEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 257 LIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 257 lIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
+|++.. .++.. +++.++++|+| ||++++...
T Consensus 142 ~Ii~d~-----~dp~~--~~~~~~~~L~p-gG~lv~~~~ 172 (262)
T 2cmg_A 142 LIFCLQ-----EPDIH--RIDGLKRMLKE-DGVFISVAK 172 (262)
T ss_dssp EEEESS-----CCCHH--HHHHHHTTEEE-EEEEEEEEE
T ss_pred EEEECC-----CChHH--HHHHHHHhcCC-CcEEEEEcC
Confidence 999862 34433 89999999999 999988643
No 233
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.87 E-value=1.1e-08 Score=96.39 Aligned_cols=110 Identities=14% Similarity=0.078 Sum_probs=67.6
Q ss_pred HHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEc----ChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 173 LAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLER----DELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdi----d~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
+.+...++++.+|||||||+|.++..+++. ..++++|+ +...+ . . ........+.+.++.+ .|+..
T Consensus 74 i~~~~~~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~--~--~-~~~~~~~~~~v~~~~~--~D~~~ 143 (305)
T 2p41_A 74 FVERNLVTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHE--E--P-IPMSTYGWNLVRLQSG--VDVFF 143 (305)
T ss_dssp HHHTTSSCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSC--C--C-CCCCSTTGGGEEEECS--CCTTT
T ss_pred HHHcCCCCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHH--H--H-HHhhhcCCCCeEEEec--ccccc
Confidence 444445677899999999999999999885 34566665 22111 1 0 0111111124555544 24443
Q ss_pred CCCCCceeEEEEccccc---cCCchH-HHHHHHHHHhccCCCCcEEEEEe
Q 019282 249 FGSGVVYDLIYASAVFL---HMPDKL-VWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~---hl~~~~-~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
++ .++||+|+|..+++ +..+.. ....|..+.++||| ||.|++..
T Consensus 144 l~-~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~Lkp-GG~~v~kv 191 (305)
T 2p41_A 144 IP-PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSN-NTQFCVKV 191 (305)
T ss_dssp SC-CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCT-TCEEEEEE
T ss_pred CC-cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCC-CCEEEEEe
Confidence 32 46899999987763 222221 11478899999999 99988753
No 234
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.87 E-value=2.7e-09 Score=105.93 Aligned_cols=143 Identities=11% Similarity=0.087 Sum_probs=89.6
Q ss_pred HHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCC
Q 019282 173 LAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGS 251 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~ 251 (343)
+...+...++.+|||+|||+|..+..+++..++.+ .++++|.+..+.+.++++.. .+.. +.++.++..++... .
T Consensus 93 ~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g-~V~AvDis~~~l~~a~~n~~r~G~~---v~~~~~Da~~l~~~-~ 167 (464)
T 3m6w_A 93 VGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKG-LLLANEVDGKRVRGLLENVERWGAP---LAVTQAPPRALAEA-F 167 (464)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCS-EEEEECSCHHHHHHHHHHHHHHCCC---CEEECSCHHHHHHH-H
T ss_pred HHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCe---EEEEECCHHHhhhh-c
Confidence 33345778899999999999999999998775422 34555555555555554433 3442 55665543333321 2
Q ss_pred CCceeEEEEc------cccccCCch--------------HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHH
Q 019282 252 GVVYDLIYAS------AVFLHMPDK--------------LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRL 311 (343)
Q Consensus 252 ~~~fDlIvs~------~v~~hl~~~--------------~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L 311 (343)
.+.||+|++. .++.+-++. ....+|+.+.++||| ||+|+.+.- .+...-..+.+...+
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp-GG~LvysTC-s~~~eEne~vv~~~l 245 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP-GGVLVYSTC-TFAPEENEGVVAHFL 245 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE-EEEEEEEES-CCCGGGTHHHHHHHH
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEec-cCchhcCHHHHHHHH
Confidence 5789999962 233332221 124689999999999 999987631 111112366777777
Q ss_pred Hhc-CCcEEEee
Q 019282 312 TSL-GLEYIGKK 322 (343)
Q Consensus 312 ~~a-Gf~~v~~~ 322 (343)
++. +|+.+...
T Consensus 246 ~~~~~~~l~~~~ 257 (464)
T 3m6w_A 246 KAHPEFRLEDAR 257 (464)
T ss_dssp HHCTTEEEECCC
T ss_pred HHCCCcEEEecc
Confidence 777 68776643
No 235
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.86 E-value=1.6e-08 Score=93.95 Aligned_cols=129 Identities=14% Similarity=0.098 Sum_probs=84.8
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
+++|.+|||+|||+|.+++.++.. +... ++++|.++.....++++.+.+...+++..+.++..++ ...+.||.|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~--V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~---~~~~~~D~V 196 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAK--VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF---PGENIADRI 196 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCE--EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC---CCCSCEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCe--EEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh---ccccCCCEE
Confidence 578999999999999999999875 3234 4445555555555555544333344677777654444 346789999
Q ss_pred EEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec--cccccCCCHHHHHHHHHhcCCcEEE
Q 019282 259 YASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN--IKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~--~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
++..... . ..++..+.++||| ||.+.+... .+.......+.+.+...+.|+++..
T Consensus 197 i~~~p~~----~--~~~l~~a~~~lk~-gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~ 253 (278)
T 3k6r_A 197 LMGYVVR----T--HEFIPKALSIAKD-GAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp EECCCSS----G--GGGHHHHHHHEEE-EEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred EECCCCc----H--HHHHHHHHHHcCC-CCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEE
Confidence 9864321 1 1278888999999 999866422 1222223367777888899998643
No 236
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.85 E-value=3.1e-09 Score=103.09 Aligned_cols=138 Identities=14% Similarity=0.023 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCC-CC-CCCcee
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTK-FG-SGVVYD 256 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~-~~-~~~~fD 256 (343)
.++.+|||+|||+|.++..++.. ....++++|+++.+...+ +++.. .++...++.++.++..++.. .. ...+||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A--~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALS--LAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHH--HHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHH--HHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCcc
Confidence 57889999999999999999873 223456666666555544 44433 33322156777765444321 11 135899
Q ss_pred EEEEcccc-----ccCCc--hHHHHHHHHHHhccCCCCcEEEEEeccccccC-CCHHHHHHHHHhcCCcEEEe
Q 019282 257 LIYASAVF-----LHMPD--KLVWVGLERLASKLRPYDGRIFVSHNIKFCSR-LGGEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 257 lIvs~~v~-----~hl~~--~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~-~~~~~l~~~L~~aGf~~v~~ 321 (343)
+|++.... .+..+ .....++..+.++|+| ||.++++........ .-.+.+.+.+.++|.+.+..
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 359 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSE-NGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDL 359 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEE-EEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCC-CcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEEe
Confidence 99985433 12222 2233467888999999 999998854222110 00334445566788885543
No 237
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.85 E-value=3.9e-09 Score=104.56 Aligned_cols=143 Identities=14% Similarity=0.092 Sum_probs=89.7
Q ss_pred HHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCC-CceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCC
Q 019282 173 LAEASHITPNSHVLEIGCGTLRVGVHFIRYLNP-ENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFG 250 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~-~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~ 250 (343)
+...+...++.+|||+|||+|..+.+++...++ ..++++|++. .+.+.++++.+ .+.. ++.++.++..++...
T Consensus 97 ~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~--~rl~~~~~n~~r~g~~--nv~v~~~Da~~l~~~- 171 (456)
T 3m4x_A 97 VGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFP--KRAKILSENIERWGVS--NAIVTNHAPAELVPH- 171 (456)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSH--HHHHHHHHHHHHHTCS--SEEEECCCHHHHHHH-
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCH--HHHHHHHHHHHHcCCC--ceEEEeCCHHHhhhh-
Confidence 333457788999999999999999999987654 3444555554 44444444333 3442 455555543333321
Q ss_pred CCCceeEEEEcc------ccccCCch--------------HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHH
Q 019282 251 SGVVYDLIYASA------VFLHMPDK--------------LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKR 310 (343)
Q Consensus 251 ~~~~fDlIvs~~------v~~hl~~~--------------~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~ 310 (343)
.++.||+|++.. ++.+-++. ....+|+.+.++||| ||+++.+.- .+...-..+.+...
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp-GG~LvYsTC-s~~~eEne~vv~~~ 249 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN-KGQLIYSTC-TFAPEENEEIISWL 249 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE-EEEEEEEES-CCCGGGTHHHHHHH
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEEe-ecccccCHHHHHHH
Confidence 246899999743 23222221 112589999999999 999987631 11111236778888
Q ss_pred HHhcCCcEEEee
Q 019282 311 LTSLGLEYIGKK 322 (343)
Q Consensus 311 L~~aGf~~v~~~ 322 (343)
+++.||+.+...
T Consensus 250 l~~~~~~l~~~~ 261 (456)
T 3m4x_A 250 VENYPVTIEEIP 261 (456)
T ss_dssp HHHSSEEEECCC
T ss_pred HHhCCCEEEecc
Confidence 899998776643
No 238
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.84 E-value=1e-08 Score=92.92 Aligned_cols=113 Identities=12% Similarity=0.039 Sum_probs=75.2
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
+.++..+.+ ..+..+|||||||+|-++..++ +...++++|||......+ +++..... ....+.. .|+
T Consensus 94 d~fY~~i~~---~~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~a--r~~~~~~g--~~~~~~v---~D~ 160 (253)
T 3frh_A 94 DTLYDFIFS---AETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVI--TPFAREKD--WDFTFAL---QDV 160 (253)
T ss_dssp HHHHHHHTS---SCCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHH--HHHHHHTT--CEEEEEE---CCT
T ss_pred HHHHHHHhc---CCCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHH--HHHHHhcC--CCceEEE---eec
Confidence 345555543 2567799999999999998776 556777888877665555 43332211 1233333 355
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEec
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHN 295 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~ 295 (343)
...++.++||+|++.-++||+.+......+ ++.+.|++ +| ++++++
T Consensus 161 ~~~~~~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~-~~-vvVsfP 206 (253)
T 3frh_A 161 LCAPPAEAGDLALIFKLLPLLEREQAGSAM-ALLQSLNT-PR-MAVSFP 206 (253)
T ss_dssp TTSCCCCBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBC-SE-EEEEEE
T ss_pred ccCCCCCCcchHHHHHHHHHhhhhchhhHH-HHHHHhcC-CC-EEEEcC
Confidence 444456799999999999998766555455 88889999 54 555543
No 239
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.83 E-value=9.7e-08 Score=92.02 Aligned_cols=129 Identities=12% Similarity=0.043 Sum_probs=83.3
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCC-cCCCCCCCcee
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMD-FTKFGSGVVYD 256 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~d-l~~~~~~~~fD 256 (343)
..++.+|||+| |+|.++..++...+...++++|+++ .+.+.++++.. .++ . ++.++.++..+ ++. ..++.||
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~--~~l~~a~~~~~~~g~-~-~v~~~~~D~~~~l~~-~~~~~fD 243 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDE--RLTKFIEKAANEIGY-E-DIEIFTFDLRKPLPD-YALHKFD 243 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCH--HHHHHHHHHHHHHTC-C-CEEEECCCTTSCCCT-TTSSCBS
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHHHcCC-C-CEEEEEChhhhhchh-hccCCcc
Confidence 34678999999 9999999998754434444555444 55555554433 333 2 56777765444 321 1246899
Q ss_pred EEEEccccccCCchHHHHHHHHHHhccCCCCcEE-EEEeccccccCCCH---HHHHHHHH-hcCCcEEE
Q 019282 257 LIYASAVFLHMPDKLVWVGLERLASKLRPYDGRI-FVSHNIKFCSRLGG---EECTKRLT-SLGLEYIG 320 (343)
Q Consensus 257 lIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~l-vi~~~~~~~~~~~~---~~l~~~L~-~aGf~~v~ 320 (343)
+|+++..++... ...+++++.++||| ||++ ++.... ..-.. ..+.+.+. +.||....
T Consensus 244 ~Vi~~~p~~~~~---~~~~l~~~~~~Lkp-gG~~~~~~~~~---~~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 244 TFITDPPETLEA---IRAFVGRGIATLKG-PRCAGYFGITR---RESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp EEEECCCSSHHH---HHHHHHHHHHTBCS-TTCEEEEEECT---TTCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred EEEECCCCchHH---HHHHHHHHHHHccc-CCeEEEEEEec---CcCCHHHHHHHHHHHHHhcCcchhh
Confidence 999987765432 35589999999999 9954 554321 11224 56777777 89997654
No 240
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.83 E-value=3e-08 Score=97.54 Aligned_cols=151 Identities=14% Similarity=0.138 Sum_probs=96.1
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
.+.+++.+.+.+.+.++.+|||+|||+|.++..+++. ...++++|+ ++.+.+.++++.. .+. . ++.++.++..
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~--s~~al~~A~~n~~~~~~-~-~v~f~~~d~~ 344 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEG--VPALVEKGQQNARLNGL-Q-NVTFYHENLE 344 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEES--CHHHHHHHHHHHHHTTC-C-SEEEEECCTT
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeC--CHHHHHHHHHHHHHcCC-C-ceEEEECCHH
Confidence 4556777777777788889999999999999999985 234445554 4455555554433 233 2 5777777554
Q ss_pred CcC-CCC-CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 245 DFT-KFG-SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 245 dl~-~~~-~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
+.. ..+ .++.||+|++.--..-. . .+++.+.+ ++| ++.++++.+.... ..+ ...|.+.||+.....
T Consensus 345 ~~l~~~~~~~~~fD~Vv~dPPr~g~--~---~~~~~l~~-~~p-~~ivyvsc~p~tl----ard-~~~l~~~Gy~~~~~~ 412 (433)
T 1uwv_A 345 EDVTKQPWAKNGFDKVLLDPARAGA--A---GVMQQIIK-LEP-IRIVYVSCNPATL----ARD-SEALLKAGYTIARLA 412 (433)
T ss_dssp SCCSSSGGGTTCCSEEEECCCTTCC--H---HHHHHHHH-HCC-SEEEEEESCHHHH----HHH-HHHHHHTTCEEEEEE
T ss_pred HHhhhhhhhcCCCCEEEECCCCccH--H---HHHHHHHh-cCC-CeEEEEECChHHH----Hhh-HHHHHHCCcEEEEEE
Confidence 422 111 24589999986443222 1 24555543 789 8888887432111 122 345677899999988
Q ss_pred ecccccc-chhHH
Q 019282 323 THDSLLF-NHYEI 334 (343)
Q Consensus 323 ~~~~l~~-~~~e~ 334 (343)
..|.+++ .|.|.
T Consensus 413 ~~d~Fp~t~HvE~ 425 (433)
T 1uwv_A 413 MLDMFPHTGHLES 425 (433)
T ss_dssp EECCSTTSSCCEE
T ss_pred EeccCCCCCeEEE
Confidence 8898886 44553
No 241
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.81 E-value=1.8e-08 Score=94.08 Aligned_cols=120 Identities=12% Similarity=0.041 Sum_probs=76.9
Q ss_pred cCCCCCCeEEEEcC------CcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhcccCCCCCCCcEE-EecccCCcCC
Q 019282 177 SHITPNSHVLEIGC------GTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPSQGLLHKRPII-VRGEDMDFTK 248 (343)
Q Consensus 177 ~~l~~~~rVLDIGC------GtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~-~~~~~~dl~~ 248 (343)
..++++.+|||+|| |+|. ..+++..+ ...++++|+++. . .++.+ +.++ +.+
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~---------v-------~~v~~~i~gD---~~~ 117 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF---------V-------SDADSTLIGD---CAT 117 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC---------B-------CSSSEEEESC---GGG
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC---------C-------CCCEEEEECc---ccc
Confidence 46788999999999 4466 44555555 345566666653 1 13445 6653 333
Q ss_pred CCCCCceeEEEEccccccC--------C-chHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEE
Q 019282 249 FGSGVVYDLIYASAVFLHM--------P-DKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYI 319 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl--------~-~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v 319 (343)
....++||+|+++...+.. . ......++++++++||| ||.|++..... ...+++.+.+++.||..+
T Consensus 118 ~~~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lkp-GG~~v~~~~~~----~~~~~l~~~l~~~GF~~v 192 (290)
T 2xyq_A 118 VHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLAL-GGSIAVKITEH----SWNADLYKLMGHFSWWTA 192 (290)
T ss_dssp CCCSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEE-EEEEEEEECSS----SCCHHHHHHHTTEEEEEE
T ss_pred CCccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCC-CcEEEEEEecc----CCHHHHHHHHHHcCCcEE
Confidence 3234689999997543211 0 12233589999999999 99999864211 113578888999999876
Q ss_pred Eee
Q 019282 320 GKK 322 (343)
Q Consensus 320 ~~~ 322 (343)
...
T Consensus 193 ~~~ 195 (290)
T 2xyq_A 193 FVT 195 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 242
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.81 E-value=1.2e-08 Score=99.18 Aligned_cols=151 Identities=11% Similarity=-0.026 Sum_probs=87.5
Q ss_pred CCccchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEE
Q 019282 161 EPWAGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIV 239 (343)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~ 239 (343)
+++..++.....+... .++.+|||+|||+|.++..++... ...++++|+++... +.++++.. .++...++.++
T Consensus 203 gff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al--~~a~~n~~~ngl~~~~v~~~ 276 (396)
T 3c0k_A 203 GYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEAL--DIARQNVELNKLDLSKAEFV 276 (396)
T ss_dssp SSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHH--HHHHHHHHHTTCCGGGEEEE
T ss_pred CcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHH--HHHHHHHHHcCCCccceEEE
Confidence 3333444455555443 577899999999999999999842 23455565555444 44444433 23302256677
Q ss_pred ecccCCcCC-CC-CCCceeEEEEccccccC-------CchHHHHHHHHHHhccCCCCcEEEEEeccccccCCC-HHHHHH
Q 019282 240 RGEDMDFTK-FG-SGVVYDLIYASAVFLHM-------PDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLG-GEECTK 309 (343)
Q Consensus 240 ~~~~~dl~~-~~-~~~~fDlIvs~~v~~hl-------~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~-~~~l~~ 309 (343)
.++..++.. +. ..+.||+|++....... .......++.++.+.|+| ||.++++........-. .+.+.+
T Consensus 277 ~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~i~~ 355 (396)
T 3c0k_A 277 RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNE-GGILLTFSCSGLMTSDLFQKIIAD 355 (396)
T ss_dssp ESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEE-EEEEEEEECCTTCCHHHHHHHHHH
T ss_pred ECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEeCCCcCCHHHHHHHHHH
Confidence 664444321 10 14689999996432111 012344589999999999 99999875322211000 334445
Q ss_pred HHHhcCCcE
Q 019282 310 RLTSLGLEY 318 (343)
Q Consensus 310 ~L~~aGf~~ 318 (343)
.+.++|++.
T Consensus 356 ~~~~~g~~~ 364 (396)
T 3c0k_A 356 AAIDAGRDV 364 (396)
T ss_dssp HHHHHTCCE
T ss_pred HHHHcCCeE
Confidence 667788544
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.79 E-value=8.4e-09 Score=98.21 Aligned_cols=125 Identities=10% Similarity=0.054 Sum_probs=79.7
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
+.++.+|||+|||+|.++.. +. ....++++|+++. +.+.++++...+....++.++.++..++. +.||+|
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~--ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-----~~fD~V 262 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPH--AIELLKKNIKLNKLEHKIIPILSDVREVD-----VKGNRV 262 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHH--HHHHHHHHHHHTTCTTTEEEEESCGGGCC-----CCEEEE
T ss_pred cCCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHH--HHHHHHHHHHHcCCCCcEEEEECChHHhc-----CCCcEE
Confidence 45788999999999999998 76 3344555555554 44444544332222235677776444332 689999
Q ss_pred EEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhc-CCcEEEeeecc
Q 019282 259 YASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSL-GLEYIGKKTHD 325 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~a-Gf~~v~~~~~~ 325 (343)
++..... . ..++..+.++|+| ||.+++...... .+...+.++++ |++.+..+...
T Consensus 263 i~dpP~~--~----~~~l~~~~~~L~~-gG~l~~~~~~~~-----~~~~~~~l~~~~~~~i~~~~~v~ 318 (336)
T 2yx1_A 263 IMNLPKF--A----HKFIDKALDIVEE-GGVIHYYTIGKD-----FDKAIKLFEKKCDCEVLEKRIVK 318 (336)
T ss_dssp EECCTTT--G----GGGHHHHHHHEEE-EEEEEEEEEESS-----SHHHHHHHHHHSEEEEEEEEEEE
T ss_pred EECCcHh--H----HHHHHHHHHHcCC-CCEEEEEEeecC-----chHHHHHHHHhcCCcEEEEEEEe
Confidence 9863221 1 1378999999999 999887632121 34556667766 78766555433
No 244
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.78 E-value=3.5e-08 Score=98.38 Aligned_cols=135 Identities=14% Similarity=0.080 Sum_probs=82.7
Q ss_pred HhcCCC--CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCC
Q 019282 175 EASHIT--PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGS 251 (343)
Q Consensus 175 ~~~~l~--~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~ 251 (343)
..+... ++.+|||+|||+|..+.++++..++. ..++++|.+..+.+.++++.. .+.. ++.++.++..++... .
T Consensus 109 ~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~-g~V~avDis~~~l~~~~~n~~r~g~~--nv~~~~~D~~~~~~~-~ 184 (479)
T 2frx_A 109 AALFADGNAPQRVMDVAAAPGSKTTQISARMNNE-GAILANEFSASRVKVLHANISRCGIS--NVALTHFDGRVFGAA-V 184 (479)
T ss_dssp HHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTC-SEEEEECSSHHHHHHHHHHHHHHTCC--SEEEECCCSTTHHHH-S
T ss_pred HHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHcCCC--cEEEEeCCHHHhhhh-c
Confidence 334555 89999999999999999999976532 234444555555554444333 3432 456666544443321 2
Q ss_pred CCceeEEEEc------cccccCCch--------------HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHH
Q 019282 252 GVVYDLIYAS------AVFLHMPDK--------------LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRL 311 (343)
Q Consensus 252 ~~~fDlIvs~------~v~~hl~~~--------------~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L 311 (343)
.+.||+|++. .++.+.++. ....+|+++.++||| ||+++++.-. ....-..+.+...+
T Consensus 185 ~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp-GG~LvysTcs-~~~~Ene~vv~~~l 262 (479)
T 2frx_A 185 PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRP-GGTLVYSTCT-LNQEENEAVCLWLK 262 (479)
T ss_dssp TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEESC-CSSTTTHHHHHHHH
T ss_pred cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccc-CCcccCHHHHHHHH
Confidence 4689999973 233332221 123589999999999 9999886421 11112255667777
Q ss_pred HhcC
Q 019282 312 TSLG 315 (343)
Q Consensus 312 ~~aG 315 (343)
++.+
T Consensus 263 ~~~~ 266 (479)
T 2frx_A 263 ETYP 266 (479)
T ss_dssp HHST
T ss_pred HHCC
Confidence 7775
No 245
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.77 E-value=3.2e-08 Score=96.26 Aligned_cols=140 Identities=13% Similarity=0.047 Sum_probs=79.4
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
++.....+.. ..+++.+|||+|||+|.++..++.. . ..++++|+ ++.+.+.++++.+ .+.. ..+..++..
T Consensus 201 qr~~r~~l~~--~~~~g~~VLDlg~GtG~~sl~~a~~-g-a~V~avDi--s~~al~~a~~n~~~ng~~---~~~~~~D~~ 271 (393)
T 4dmg_A 201 QRENRRLFEA--MVRPGERVLDVYSYVGGFALRAARK-G-AYALAVDK--DLEALGVLDQAALRLGLR---VDIRHGEAL 271 (393)
T ss_dssp GHHHHHHHHT--TCCTTCEEEEESCTTTHHHHHHHHT-T-CEEEEEES--CHHHHHHHHHHHHHHTCC---CEEEESCHH
T ss_pred HHHHHHHHHH--HhcCCCeEEEcccchhHHHHHHHHc-C-CeEEEEEC--CHHHHHHHHHHHHHhCCC---CcEEEccHH
Confidence 3444444432 3456899999999999999999984 2 23445555 4455555554433 3332 123344433
Q ss_pred CcCCCCCCCceeEEEEccccccCCc-------hHHHHHHHHHHhccCCCCcEEEEEeccccccCCCH----HHHHHHHHh
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPD-------KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGG----EECTKRLTS 313 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~-------~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~----~~l~~~L~~ 313 (343)
++.... .+.||+|++......-.. .....++..+.++||| ||.++++.... .... +.+.+.+.+
T Consensus 272 ~~l~~~-~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~Lkp-GG~Lv~~s~s~---~~~~~~f~~~v~~a~~~ 346 (393)
T 4dmg_A 272 PTLRGL-EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAE-EGFLWLSSCSY---HLRLEDLLEVARRAAAD 346 (393)
T ss_dssp HHHHTC-CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEE-EEEEEEEECCT---TSCHHHHHHHHHHHHHH
T ss_pred HHHHHh-cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEECCC---CCCHHHHHHHHHHHHHH
Confidence 332111 334999998754322111 1223588899999999 99998653211 1223 344455566
Q ss_pred cCCcEE
Q 019282 314 LGLEYI 319 (343)
Q Consensus 314 aGf~~v 319 (343)
+|.+..
T Consensus 347 ~g~~~~ 352 (393)
T 4dmg_A 347 LGRRLR 352 (393)
T ss_dssp HTCCEE
T ss_pred hCCeEE
Confidence 675543
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.75 E-value=2.3e-08 Score=93.72 Aligned_cols=117 Identities=20% Similarity=0.226 Sum_probs=71.0
Q ss_pred CCCccchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEE
Q 019282 160 GEPWAGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPII 238 (343)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~ 238 (343)
|..+-....+.+.+.+.+.+.++.+|||||||+|.++..+++. +..++++|.+..+.+.+++... .+. .++.+
T Consensus 21 Gq~fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~----~~~v~~vDi~~~~~~~a~~~~~~~~~--~~v~~ 94 (299)
T 2h1r_A 21 GQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL----AKKVITIDIDSRMISEVKKRCLYEGY--NNLEV 94 (299)
T ss_dssp --CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT----SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEC
T ss_pred ccceecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc----CCEEEEEECCHHHHHHHHHHHHHcCC--CceEE
Confidence 3333345667777877788888999999999999999999874 2345555555555555554332 232 24556
Q ss_pred EecccCCcCCCCCCCceeEEEEccccccCCchHHHHHH---------------HHHHhccCCCCc
Q 019282 239 VRGEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGL---------------ERLASKLRPYDG 288 (343)
Q Consensus 239 ~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L---------------~~l~r~LkP~GG 288 (343)
+.++..+ ++ ...||+|+++..++ +..+....++ +.+.|+++| +|
T Consensus 95 ~~~D~~~---~~-~~~~D~Vv~n~py~-~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~-~G 153 (299)
T 2h1r_A 95 YEGDAIK---TV-FPKFDVCTANIPYK-ISSPLIFKLISHRPLFKCAVLMFQKEFAERMLAN-VG 153 (299)
T ss_dssp ----CCS---SC-CCCCSEEEEECCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCC-TT
T ss_pred EECchhh---CC-cccCCEEEEcCCcc-cccHHHHHHHhcCCccceeeehHHHHHHHHHhcC-CC
Confidence 6554333 32 24899999976653 4444333344 345677887 77
No 247
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.75 E-value=2.2e-08 Score=104.27 Aligned_cols=142 Identities=15% Similarity=0.157 Sum_probs=86.7
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
++.....+.. ..++.+|||+|||||.++..++.. ....++++|+++.. .+.++++.+ .++...++.++.++..
T Consensus 527 ~r~~r~~l~~---~~~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~a--l~~a~~N~~~ngl~~~~v~~i~~D~~ 600 (703)
T 3v97_A 527 HRIARRMLGQ---MSKGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTY--LEWAERNLRLNGLTGRAHRLIQADCL 600 (703)
T ss_dssp GHHHHHHHHH---HCTTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHH--HHHHHHHHHHTTCCSTTEEEEESCHH
T ss_pred HHHHHHHHHH---hcCCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHH--HHHHHHHHHHcCCCccceEEEecCHH
Confidence 4444444443 236889999999999999998873 22335555555544 444454433 3443246777777555
Q ss_pred CcCCCCCCCceeEEEEcccccc-------C--CchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcC
Q 019282 245 DFTKFGSGVVYDLIYASAVFLH-------M--PDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLG 315 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~h-------l--~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aG 315 (343)
++... ..++||+|++...... . .......++..+.++|+| ||.++++....... .. .+.+++.|
T Consensus 601 ~~l~~-~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkp-gG~L~~s~~~~~~~-~~----~~~l~~~g 673 (703)
T 3v97_A 601 AWLRE-ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA-GGTIMFSNNKRGFR-MD----LDGLAKLG 673 (703)
T ss_dssp HHHHH-CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEE-EEEEEEEECCTTCC-CC----HHHHHHTT
T ss_pred HHHHh-cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCC-CcEEEEEECCcccc-cC----HHHHHHcC
Confidence 43212 2468999998643210 0 112334589999999999 99999876431111 11 45677899
Q ss_pred CcEEE
Q 019282 316 LEYIG 320 (343)
Q Consensus 316 f~~v~ 320 (343)
|+...
T Consensus 674 ~~~~~ 678 (703)
T 3v97_A 674 LKAQE 678 (703)
T ss_dssp EEEEE
T ss_pred Cceee
Confidence 87443
No 248
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.74 E-value=3.3e-08 Score=97.58 Aligned_cols=148 Identities=21% Similarity=0.240 Sum_probs=94.0
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc-------------CCCceEEEEcChhHHHHHHHHhcccCCCCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYL-------------NPENFHCLERDELSLMAAFRYELPSQGLLH 233 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~-------------~~~~~~vvdid~s~~~~a~a~~~~~~~~~~ 233 (343)
+.+.+.+.+.+...++.+|||.|||+|.++..+++.+ ....++++|+++.....+..+. ...+...
T Consensus 157 ~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl-~l~g~~~ 235 (445)
T 2okc_A 157 RPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNL-YLHGIGT 235 (445)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHH-HHTTCCS
T ss_pred HHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHH-HHhCCCc
Confidence 4567777777777778899999999999999988764 2356788888876666654332 1233321
Q ss_pred CCcEEEecccCCcCCCCCCCceeEEEEccccccCCch---------------HHHHHHHHHHhccCCCCcEEEEEecccc
Q 019282 234 KRPIIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPDK---------------LVWVGLERLASKLRPYDGRIFVSHNIKF 298 (343)
Q Consensus 234 ~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~---------------~~~~~L~~l~r~LkP~GG~lvi~~~~~~ 298 (343)
....+..++... .+..+.||+|+++..+.+.... ....+++.+.+.||| ||++.+..+...
T Consensus 236 ~~~~i~~gD~l~---~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~-gG~~a~V~p~~~ 311 (445)
T 2okc_A 236 DRSPIVCEDSLE---KEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKT-GGRAAVVLPDNV 311 (445)
T ss_dssp SCCSEEECCTTT---SCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEE-EEEEEEEEEHHH
T ss_pred CCCCEeeCCCCC---CcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhcc-CCEEEEEECCcc
Confidence 133455553332 2233589999999777654321 112489999999999 999977654332
Q ss_pred ccCCC-HHHHHHHH-HhcCCcEE
Q 019282 299 CSRLG-GEECTKRL-TSLGLEYI 319 (343)
Q Consensus 299 ~~~~~-~~~l~~~L-~~aGf~~v 319 (343)
...-+ ...+++.| +..++..+
T Consensus 312 L~~~~~~~~iR~~L~~~~~l~~i 334 (445)
T 2okc_A 312 LFEAGAGETIRKRLLQDFNLHTI 334 (445)
T ss_dssp HHCSTHHHHHHHHHHHHEEEEEE
T ss_pred cccCcHHHHHHHHHHhcCcEEEE
Confidence 22212 45666644 45555433
No 249
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.73 E-value=3.5e-08 Score=95.44 Aligned_cols=131 Identities=8% Similarity=-0.047 Sum_probs=78.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--CCCceeEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG--SGVVYDLI 258 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~--~~~~fDlI 258 (343)
++.+|||+|||+|.++..++.. ...++++|+++ .+.+.++++...+... ++.++.++..++.... .+++||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~--~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSA--EALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCH--HHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCH--HHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCeeEE
Confidence 7789999999999999999985 23445555555 4444445443322222 2667766444432110 14689999
Q ss_pred EEccccccCCc-------hHHHHHHHHHHhccCCCCcEEEEEeccccccCCC-HHHHHHHHHhcCCc
Q 019282 259 YASAVFLHMPD-------KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLG-GEECTKRLTSLGLE 317 (343)
Q Consensus 259 vs~~v~~hl~~-------~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~-~~~l~~~L~~aGf~ 317 (343)
++......... .....++..+.++|+| ||.++++.......... .+.+.+.+.++|..
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 349 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKE-GGILATASCSHHMTEPLFYAMVAEAAQDAHRL 349 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEE-EEEEEEEECCTTSCHHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCe
Confidence 98543322111 2334588999999999 99998875322111000 23444566677743
No 250
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.73 E-value=3e-08 Score=96.23 Aligned_cols=132 Identities=11% Similarity=0.077 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCC-C-CCCcee
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKF-G-SGVVYD 256 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~-~-~~~~fD 256 (343)
+++.+|||+|||+|.++..++.. +...++++|+++.....+ +++.. .++. .++.++.++..++... . ..++||
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a--~~n~~~n~~~-~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETA--KENAKLNGVE-DRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHH--HHHHHHTTCG-GGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHH--HHHHHHcCCC-ccceEEECCHHHHHHHHHhhCCCCC
Confidence 47889999999999999999984 333556666655554444 44333 2332 2566776644433211 0 146899
Q ss_pred EEEEccccccCCc-------hHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHH----HHHHHHhcCCcEE
Q 019282 257 LIYASAVFLHMPD-------KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEE----CTKRLTSLGLEYI 319 (343)
Q Consensus 257 lIvs~~v~~hl~~-------~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~----l~~~L~~aGf~~v 319 (343)
+|++......... .....++.++.++|+| ||.++++.... ....+. +.+.+.+.|....
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~lv~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~ 361 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKD-GGILVTCSCSQ---HVDLQMFKDMIIAAGAKAGKFLK 361 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEE-EEEEEEEECCT---TSCHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEECCC---CCCHHHHHHHHHHHHHHcCCeEE
Confidence 9999643322211 2344588999999999 99988764221 122333 3445556675443
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.71 E-value=1.2e-09 Score=99.18 Aligned_cols=116 Identities=14% Similarity=0.162 Sum_probs=71.9
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
..+.+.+.+.+.+.++.+|||||||+|.++..+++.. ..++++|.+..+.+.+++... ...++.++.++..++
T Consensus 15 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~----~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 15 EKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS----KQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQF 87 (245)
T ss_dssp TTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS----SEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC----CeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhc
Confidence 3456677777888889999999999999999999853 346666666555554433221 122455665544333
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHH----------HH----HHHHhccCCCCcEEEEE
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWV----------GL----ERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~----------~L----~~l~r~LkP~GG~lvi~ 293 (343)
+ +..+++| .|+++..+. ........ ++ +.+.++|+| ||.+++.
T Consensus 88 ~-~~~~~~f-~vv~n~Py~-~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~-~G~l~v~ 144 (245)
T 1yub_A 88 Q-FPNKQRY-KIVGNIPYH-LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDI-HRTLGLL 144 (245)
T ss_dssp T-CCCSSEE-EEEEECCSS-SCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCG-GGSHHHH
T ss_pred C-cccCCCc-EEEEeCCcc-ccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCC-CCchhhh
Confidence 3 2223578 666654331 21111111 34 669999999 9988664
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.69 E-value=5.2e-08 Score=88.48 Aligned_cols=96 Identities=9% Similarity=0.209 Sum_probs=59.8
Q ss_pred CCCccchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEE
Q 019282 160 GEPWAGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIV 239 (343)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~ 239 (343)
|..+-..+.+.+.+.+.+.+.++.+|||||||+|.++..+++.. . .++++|.+..+.+.+++.... ..++.++
T Consensus 9 gQ~fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~--~--~v~~vD~~~~~~~~a~~~~~~---~~~v~~~ 81 (244)
T 1qam_A 9 SQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC--N--FVTAIEIDHKLCKTTENKLVD---HDNFQVL 81 (244)
T ss_dssp -CCBCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS--S--EEEEECSCHHHHHHHHHHTTT---CCSEEEE
T ss_pred CccccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC--C--eEEEEECCHHHHHHHHHhhcc---CCCeEEE
Confidence 33333456678888888888889999999999999999999853 3 455555555555555543321 1356677
Q ss_pred ecccCCcCCCCCCCceeEEEEcccc
Q 019282 240 RGEDMDFTKFGSGVVYDLIYASAVF 264 (343)
Q Consensus 240 ~~~~~dl~~~~~~~~fDlIvs~~v~ 264 (343)
.++..++. +.....| .|+++..+
T Consensus 82 ~~D~~~~~-~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 82 NKDILQFK-FPKNQSY-KIFGNIPY 104 (244)
T ss_dssp CCCGGGCC-CCSSCCC-EEEEECCG
T ss_pred EChHHhCC-cccCCCe-EEEEeCCc
Confidence 66544443 2212355 45555433
No 253
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.55 E-value=1.1e-07 Score=91.63 Aligned_cols=148 Identities=12% Similarity=0.110 Sum_probs=88.5
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~ 244 (343)
.+.+++.+.+..... +.+|||+|||+|.++..+++.. . .++++|.++.+.+.++++.. .++ .++.++.++..
T Consensus 199 ~~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~--~--~V~gvd~~~~ai~~a~~n~~~ng~--~~v~~~~~d~~ 271 (369)
T 3bt7_A 199 NIQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNF--D--RVLATEIAKPSVAAAQYNIAANHI--DNVQIIRMAAE 271 (369)
T ss_dssp HHHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGS--S--EEEEECCCHHHHHHHHHHHHHTTC--CSEEEECCCSH
T ss_pred HHHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcC--C--EEEEEECCHHHHHHHHHHHHHcCC--CceEEEECCHH
Confidence 456677777766654 5789999999999999888732 2 45566666666665555443 333 25677766544
Q ss_pred CcCC-CCC-------------CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHH
Q 019282 245 DFTK-FGS-------------GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKR 310 (343)
Q Consensus 245 dl~~-~~~-------------~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~ 310 (343)
++.. +.. +..||+|+...-..- ...++.+.|+| +|.+++..-.... -..++..
T Consensus 272 ~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g--------~~~~~~~~l~~-~g~ivyvsc~p~t---~ard~~~- 338 (369)
T 3bt7_A 272 EFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG--------LDSETEKMVQA-YPRILYISCNPET---LCKNLET- 338 (369)
T ss_dssp HHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC--------CCHHHHHHHTT-SSEEEEEESCHHH---HHHHHHH-
T ss_pred HHHHHHhhccccccccccccccCCCCEEEECcCccc--------cHHHHHHHHhC-CCEEEEEECCHHH---HHHHHHH-
Confidence 4321 111 137999987532211 23456666778 8887654210000 0233333
Q ss_pred HHhcCCcEEEeeecccccc-chhHH
Q 019282 311 LTSLGLEYIGKKTHDSLLF-NHYEI 334 (343)
Q Consensus 311 L~~aGf~~v~~~~~~~l~~-~~~e~ 334 (343)
|. .||+.......|.+|. .|.|.
T Consensus 339 l~-~~y~~~~~~~~D~FP~T~HvE~ 362 (369)
T 3bt7_A 339 LS-QTHKVERLALFDQFPYTHHMQC 362 (369)
T ss_dssp HH-HHEEEEEEEEECCSTTSSCCEE
T ss_pred Hh-hCcEEEEEEeeccCCCCCcEEE
Confidence 33 3799999999999886 44553
No 254
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.50 E-value=2.1e-07 Score=87.10 Aligned_cols=91 Identities=16% Similarity=0.207 Sum_probs=64.2
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM 244 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 244 (343)
....+.+.+.+.+.+.++.+|||||||+|.++..+++. ...++++|+|......+ ++... + ..++.++.++..
T Consensus 34 ~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a--~~~~~-~--~~~v~vi~gD~l 106 (295)
T 3gru_A 34 IDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYA--NKLKE-L--YNNIEIIWGDAL 106 (295)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHH--HHHHH-H--CSSEEEEESCTT
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHH--HHHhc-c--CCCeEEEECchh
Confidence 34567888888889999999999999999999999986 35677777777655544 33222 1 125677776444
Q ss_pred CcCCCCCCCceeEEEEcccc
Q 019282 245 DFTKFGSGVVYDLIYASAVF 264 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~ 264 (343)
++. + .+..||.|+++..+
T Consensus 107 ~~~-~-~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 107 KVD-L-NKLDFNKVVANLPY 124 (295)
T ss_dssp TSC-G-GGSCCSEEEEECCG
T ss_pred hCC-c-ccCCccEEEEeCcc
Confidence 432 2 23479999988665
No 255
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.45 E-value=4.7e-07 Score=83.68 Aligned_cols=102 Identities=17% Similarity=0.105 Sum_probs=67.9
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d 245 (343)
...+.+.+.+..++.++ +|||||||+|.++..+++.. ..++++|+|......+ ++... ..++.++.++..+
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l--~~~~~----~~~v~vi~~D~l~ 102 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVL--EETLS----GLPVRLVFQDALL 102 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHH--HHHTT----TSSEEEEESCGGG
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHH--HHhcC----CCCEEEEECChhh
Confidence 45677778888889999 99999999999999999853 5677777777665554 33221 2366777774444
Q ss_pred cCCCCCCCceeEEEEccccccCCchHHHHHHHH
Q 019282 246 FTKFGSGVVYDLIYASAVFLHMPDKLVWVGLER 278 (343)
Q Consensus 246 l~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~ 278 (343)
+. +.....+|.|+++.-+ ++..+....+++.
T Consensus 103 ~~-~~~~~~~~~iv~NlPy-~iss~il~~ll~~ 133 (271)
T 3fut_A 103 YP-WEEVPQGSLLVANLPY-HIATPLVTRLLKT 133 (271)
T ss_dssp SC-GGGSCTTEEEEEEECS-SCCHHHHHHHHHH
T ss_pred CC-hhhccCccEEEecCcc-cccHHHHHHHhcC
Confidence 32 2111368999888766 5555544344443
No 256
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.44 E-value=4.4e-07 Score=83.13 Aligned_cols=91 Identities=18% Similarity=0.216 Sum_probs=59.4
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD 245 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d 245 (343)
...+.+.+.+.+++.++.+|||||||+|.++..+++.. ..++++|+|+. +.+.+++.... ..++.++.++..+
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~--~~~~~~~~~~~---~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRD--LVAFLQKKYNQ---QKNITIYQNDALQ 86 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHH--HHHHHHHHHTT---CTTEEEEESCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHH--HHHHHHHHHhh---CCCcEEEEcchHh
Confidence 35577778888889999999999999999999998843 44556666554 44444443322 2366777775554
Q ss_pred cC--CCCCCCceeEEEEcccc
Q 019282 246 FT--KFGSGVVYDLIYASAVF 264 (343)
Q Consensus 246 l~--~~~~~~~fDlIvs~~v~ 264 (343)
+. ++..+++|| |+++.-+
T Consensus 87 ~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 87 FDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp CCGGGSCCSSCEE-EEEECCH
T ss_pred CCHHHhccCCCeE-EEecCCc
Confidence 42 111135788 6666544
No 257
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.37 E-value=1.1e-06 Score=80.73 Aligned_cols=119 Identities=12% Similarity=0.086 Sum_probs=69.9
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
-.++..+.+...++++.+|||+|||+|.++..++...+...+.++++.... .. .-...... ..++..+..+ .+.
T Consensus 60 A~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl--~~--~pi~~~~~-g~~ii~~~~~-~dv 133 (277)
T 3evf_A 60 TAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDG--HE--KPMNVQSL-GWNIITFKDK-TDI 133 (277)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT--CC--CCCCCCBT-TGGGEEEECS-CCT
T ss_pred HHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccC--cc--cccccCcC-CCCeEEEecc-cee
Confidence 334555555577888899999999999999988764333333344443211 00 00000000 1123333332 233
Q ss_pred CCCCCCCceeEEEEccccccCCchHHH-----HHHHHHHhccCCCC-cEEEEEe
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVW-----VGLERLASKLRPYD-GRIFVSH 294 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~-----~~L~~l~r~LkP~G-G~lvi~~ 294 (343)
..+ .+++||+|+|..+.+ .+....+ .+|+.+.++|+| | |.|++-.
T Consensus 134 ~~l-~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~Lkp-G~G~FV~KV 184 (277)
T 3evf_A 134 HRL-EPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLAC-GVDNFCVKV 184 (277)
T ss_dssp TTS-CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTT-CCSEEEEEE
T ss_pred hhc-CCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCC-CCCeEEEEe
Confidence 333 356899999987775 4443222 346888999999 9 9998853
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.32 E-value=8.4e-07 Score=85.01 Aligned_cols=111 Identities=16% Similarity=0.220 Sum_probs=69.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-C--C-CCC---CCcEEEecccCCcCCC--CC
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-Q--G-LLH---KRPIIVRGEDMDFTKF--GS 251 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~--~-~~~---~~~~~~~~~~~dl~~~--~~ 251 (343)
++.+||+||||+|.++..++++.+ ..++++++|+.....+ ++... . + +.+ .++.++.+++..+..- ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~A--r~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGC--KKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHH--HHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHH--HHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 467999999999999999988654 6678888887665555 33321 1 1 111 1466666655544311 02
Q ss_pred CCceeEEEEcccc-cc--CCc-hHHHHHHHHH----HhccCCCCcEEEEEec
Q 019282 252 GVVYDLIYASAVF-LH--MPD-KLVWVGLERL----ASKLRPYDGRIFVSHN 295 (343)
Q Consensus 252 ~~~fDlIvs~~v~-~h--l~~-~~~~~~L~~l----~r~LkP~GG~lvi~~~ 295 (343)
+++||+|++...- .. .+. .....+++.+ +++|+| ||.+++...
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~p-gGilv~qs~ 315 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ-DGKYFTQGN 315 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE-EEEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCC-CcEEEEEcC
Confidence 4689999986532 11 110 1223466666 999999 999988753
No 259
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.30 E-value=2.1e-06 Score=86.84 Aligned_cols=146 Identities=16% Similarity=0.105 Sum_probs=91.5
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCC------------------CceEEEEcChhHHHHHHHHhccc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNP------------------ENFHCLERDELSLMAAFRYELPS 228 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~------------------~~~~vvdid~s~~~~a~a~~~~~ 228 (343)
+.+.+.+.+.+...++.+|||.|||+|.++..+++.+.. ..++++++++.....+..+-. .
T Consensus 155 ~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~-l 233 (541)
T 2ar0_A 155 RPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL-L 233 (541)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH-H
Confidence 445666666667777889999999999999988876521 357888888877666644321 1
Q ss_pred CCCCC---CCcEEEecccCCcCCCCCCCceeEEEEccccccCCc------------hHHHHHHHHHHhccCCCCcEEEEE
Q 019282 229 QGLLH---KRPIIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPD------------KLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 229 ~~~~~---~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~------------~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+... ....+..++....... ..+.||+|+++-.+..... .....++..+.+.||| ||++.+.
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~~~~-~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~-gGr~a~V 311 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGSDGE-NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHP-GGRAAVV 311 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSHHHH-TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEE-EEEEEEE
T ss_pred hCCCccccccCCeEeCCCcccccc-cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCC-CCEEEEE
Confidence 23321 0134555533322111 2468999999876654321 1122489999999999 9998776
Q ss_pred eccccccCCC-HHHHHHHHHhcC
Q 019282 294 HNIKFCSRLG-GEECTKRLTSLG 315 (343)
Q Consensus 294 ~~~~~~~~~~-~~~l~~~L~~aG 315 (343)
.+..+...-+ ...+++.|.+.+
T Consensus 312 ~p~~~L~~~~~~~~iR~~L~~~~ 334 (541)
T 2ar0_A 312 VPDNVLFEGGKGTDIRRDLMDKC 334 (541)
T ss_dssp EEHHHHHCCTHHHHHHHHHHHHE
T ss_pred ecCcceecCcHHHHHHHHHhhcC
Confidence 5433322222 456777776654
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.29 E-value=2.5e-06 Score=82.69 Aligned_cols=124 Identities=13% Similarity=0.050 Sum_probs=77.8
Q ss_pred cchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCC--------------------------------------
Q 019282 164 AGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNP-------------------------------------- 205 (343)
Q Consensus 164 ~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~-------------------------------------- 205 (343)
+..+.+...+.......++.+|||.+||+|.+++.++....+
T Consensus 178 pl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 345667777877788888999999999999999998775322
Q ss_pred CceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEEEEcccccc-CC-chHHHHHHHHHHhc
Q 019282 206 ENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASAVFLH-MP-DKLVWVGLERLASK 282 (343)
Q Consensus 206 ~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~h-l~-~~~~~~~L~~l~r~ 282 (343)
..++++|+|+.....+ +++.. .++. ..+.+..++..+ +...+.||+|+++--+.. +. ......+.+++.+.
T Consensus 258 ~~V~GvDid~~ai~~A--r~Na~~~gl~-~~i~~~~~D~~~---l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~ 331 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIA--RENAEIAGVD-EYIEFNVGDATQ---FKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYA 331 (385)
T ss_dssp CCEEEEESCHHHHHHH--HHHHHHHTCG-GGEEEEECCGGG---CCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHH--HHHHHHcCCC-CceEEEECChhh---cCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHH
Confidence 3466666666555555 44333 3332 256666664444 334568999999877642 22 12333345544444
Q ss_pred cC--CCCcEEEEEe
Q 019282 283 LR--PYDGRIFVSH 294 (343)
Q Consensus 283 Lk--P~GG~lvi~~ 294 (343)
|| + ||.+++..
T Consensus 332 lk~~~-g~~~~iit 344 (385)
T 3ldu_A 332 FRKLK-NWSYYLIT 344 (385)
T ss_dssp HHTSB-SCEEEEEE
T ss_pred HhhCC-CCEEEEEE
Confidence 44 4 66666553
No 261
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.29 E-value=6.6e-06 Score=79.66 Aligned_cols=124 Identities=11% Similarity=0.080 Sum_probs=79.4
Q ss_pred cchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCC--------------------------------------
Q 019282 164 AGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNP-------------------------------------- 205 (343)
Q Consensus 164 ~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~-------------------------------------- 205 (343)
++.+.+...++......++..|||.+||+|.+++.++....+
T Consensus 177 pl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 177 PIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 356677777777788888999999999999999988764432
Q ss_pred CceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEEEEcccccc-CCc-hHHHHHHHHHHhc
Q 019282 206 ENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASAVFLH-MPD-KLVWVGLERLASK 282 (343)
Q Consensus 206 ~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~h-l~~-~~~~~~L~~l~r~ 282 (343)
..++++|+|+.+...+ +++.. .++. +.+.+..++..++. ..+.||+|+++--+.. +++ .....+...+.+.
T Consensus 257 ~~v~GvDid~~al~~A--r~Na~~~gl~-~~I~~~~~D~~~l~---~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~ 330 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIA--RKNAREVGLE-DVVKLKQMRLQDFK---TNKINGVLISNPPYGERLLDDKAVDILYNEMGET 330 (384)
T ss_dssp CCEEEEESCHHHHHHH--HHHHHHTTCT-TTEEEEECCGGGCC---CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHH--HHHHHHcCCC-CceEEEECChHHCC---ccCCcCEEEECCchhhccCCHHHHHHHHHHHHHH
Confidence 2366666666555554 44433 3443 35677776444443 3458999999866532 222 3333455544444
Q ss_pred cC--CCCcEEEEEe
Q 019282 283 LR--PYDGRIFVSH 294 (343)
Q Consensus 283 Lk--P~GG~lvi~~ 294 (343)
|| | ||.+++..
T Consensus 331 lk~~~-g~~~~iit 343 (384)
T 3ldg_A 331 FAPLK-TWSQFILT 343 (384)
T ss_dssp HTTCT-TSEEEEEE
T ss_pred HhhCC-CcEEEEEE
Confidence 43 6 78877654
No 262
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.27 E-value=8.2e-07 Score=81.43 Aligned_cols=135 Identities=17% Similarity=0.134 Sum_probs=77.2
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHc-------CC-----CceEEEEcCh---hHHHH---------HHHHhcccC------
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYL-------NP-----ENFHCLERDE---LSLMA---------AFRYELPSQ------ 229 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~-------~~-----~~~~vvdid~---s~~~~---------a~a~~~~~~------ 229 (343)
.+..+|||||||+|..+..+++.. +. ..++.++..+ ..+.. +.++++.+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 345799999999999998877653 32 2344455443 11111 122222111
Q ss_pred -----CCCC--CCcEEEecccCC-cCCCCC--CCceeEEEEcc-ccccCCchHHHHHHHHHHhccCCCCcEEEEEecccc
Q 019282 230 -----GLLH--KRPIIVRGEDMD-FTKFGS--GVVYDLIYASA-VFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKF 298 (343)
Q Consensus 230 -----~~~~--~~~~~~~~~~~d-l~~~~~--~~~fDlIvs~~-v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~ 298 (343)
.... .++.++.+++.+ ++.... ...||+|+.-. .....++-....+|+.++++|+| ||+|+. ..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~p-GG~l~t-ys--- 213 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARP-GGTLAT-FT--- 213 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEE-EEEEEE-SC---
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCC-CcEEEE-Ee---
Confidence 0111 133455555444 232211 13799999853 22222332234589999999999 999863 11
Q ss_pred ccCCCHHHHHHHHHhcCCcEEEeee
Q 019282 299 CSRLGGEECTKRLTSLGLEYIGKKT 323 (343)
Q Consensus 299 ~~~~~~~~l~~~L~~aGf~~v~~~~ 323 (343)
....++..|.++||++.....
T Consensus 214 ----aa~~vrr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 214 ----SAGFVRRGLQEAGFTMQKRKG 234 (257)
T ss_dssp ----CBHHHHHHHHHHTEEEEEECC
T ss_pred ----CCHHHHHHHHHCCCEEEeCCC
Confidence 124678889999999876443
No 263
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.27 E-value=6.3e-06 Score=80.02 Aligned_cols=124 Identities=14% Similarity=0.084 Sum_probs=77.7
Q ss_pred cchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCC--------------------------------------
Q 019282 164 AGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNP-------------------------------------- 205 (343)
Q Consensus 164 ~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~-------------------------------------- 205 (343)
++.+.+...++......++..|||.+||+|.+++.++....+
T Consensus 184 pl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 184 PIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp SCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 456777777887888888999999999999999888765432
Q ss_pred CceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEEEEcccccc-CCc-hHHHHHHHHHHhc
Q 019282 206 ENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASAVFLH-MPD-KLVWVGLERLASK 282 (343)
Q Consensus 206 ~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~h-l~~-~~~~~~L~~l~r~ 282 (343)
..++++|+++.++..+ +++.. .++. ..+.+..++..++. ..+.||+|+++--+.. +.+ .....+...+.+.
T Consensus 264 ~~V~GvDid~~al~~A--r~Na~~~gl~-~~I~~~~~D~~~~~---~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~ 337 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIA--KQNAVEAGLG-DLITFRQLQVADFQ---TEDEYGVVVANPPYGERLEDEEAVRQLYREMGIV 337 (393)
T ss_dssp CCEEEEESCHHHHHHH--HHHHHHTTCT-TCSEEEECCGGGCC---CCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHH--HHHHHHcCCC-CceEEEECChHhCC---CCCCCCEEEECCCCccccCCchhHHHHHHHHHHH
Confidence 2366666666555554 44433 3443 35777776444443 3468999999966532 222 2222334433333
Q ss_pred c--CCCCcEEEEEe
Q 019282 283 L--RPYDGRIFVSH 294 (343)
Q Consensus 283 L--kP~GG~lvi~~ 294 (343)
| -| ||.+++..
T Consensus 338 lk~~~-g~~~~iit 350 (393)
T 3k0b_A 338 YKRMP-TWSVYVLT 350 (393)
T ss_dssp HHTCT-TCEEEEEE
T ss_pred HhcCC-CCEEEEEE
Confidence 3 36 77776654
No 264
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.26 E-value=8.7e-06 Score=78.49 Aligned_cols=142 Identities=12% Similarity=0.099 Sum_probs=84.0
Q ss_pred CCeEEEEcCCcCHHHHHHHH--------Hc-------CCCceEEEEcChhHHHHHHHHhcccC-C-C--------CCCCc
Q 019282 182 NSHVLEIGCGTLRVGVHFIR--------YL-------NPENFHCLERDELSLMAAFRYELPSQ-G-L--------LHKRP 236 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~--------~~-------~~~~~~vvdid~s~~~~a~a~~~~~~-~-~--------~~~~~ 236 (343)
..+|+|+|||+|..+..++. .+ +...+...|+....-..-+. .+... . . ...+.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~-~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQ-LLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHH-HSCCBCCCC--CCC---CCCBC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHh-hhhhhhhhcchhhhccccCCCc
Confidence 47899999999999998833 22 22333444544433222211 11110 0 0 00012
Q ss_pred EEEecccCCc-CCCCCCCceeEEEEccccccCCch------------------------------------HHHHHHHHH
Q 019282 237 IIVRGEDMDF-TKFGSGVVYDLIYASAVFLHMPDK------------------------------------LVWVGLERL 279 (343)
Q Consensus 237 ~~~~~~~~dl-~~~~~~~~fDlIvs~~v~~hl~~~------------------------------------~~~~~L~~l 279 (343)
.++.+....| ....++++||+|+++.++||+.+. +...+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333222222 112257899999999999998621 334578899
Q ss_pred HhccCCCCcEEEEEec----c-------------cc----------------------c-cC--CCHHHHHHHHH-hcCC
Q 019282 280 ASKLRPYDGRIFVSHN----I-------------KF----------------------C-SR--LGGEECTKRLT-SLGL 316 (343)
Q Consensus 280 ~r~LkP~GG~lvi~~~----~-------------~~----------------------~-~~--~~~~~l~~~L~-~aGf 316 (343)
++.|+| ||+++++.. . +. . .. .+.++++..++ ..||
T Consensus 212 a~eL~p-GG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F 290 (374)
T 3b5i_A 212 AAEVKR-GGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSF 290 (374)
T ss_dssp HHHEEE-EEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSE
T ss_pred HHHhCC-CCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCc
Confidence 999999 999998721 0 00 0 01 12889999998 5899
Q ss_pred cEEEeeecc
Q 019282 317 EYIGKKTHD 325 (343)
Q Consensus 317 ~~v~~~~~~ 325 (343)
++...+.+.
T Consensus 291 ~I~~le~~~ 299 (374)
T 3b5i_A 291 AIDKLVVYK 299 (374)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 988776543
No 265
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.22 E-value=2.3e-06 Score=82.72 Aligned_cols=102 Identities=15% Similarity=0.036 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-C---------------CCCCCCcEEEecccC
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-Q---------------GLLHKRPIIVRGEDM 244 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~---------------~~~~~~~~~~~~~~~ 244 (343)
++.+|||+|||+|..++.++...+...++++|+++.....+.. +.+ . +. . .+.++.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~--N~~~n~~~~~~~~~~~~~~~gl-~-~i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKR--NVMLNFDGELRESKGRAILKGE-K-TIVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHH--HHHHHCCSCCEECSSEEEEESS-S-EEEEEESCHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHH--HHHHhcccccccccccccccCC-C-ceEEEcCcHH
Confidence 6789999999999999999987665567777777766555533 322 1 22 1 2556665443
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
++... ..+.||+|+..- +. .. ..+++.+.+.||| ||.++++.
T Consensus 123 ~~~~~-~~~~fD~I~lDP-~~---~~--~~~l~~a~~~lk~-gG~l~vt~ 164 (378)
T 2dul_A 123 RLMAE-RHRYFHFIDLDP-FG---SP--MEFLDTALRSAKR-RGILGVTA 164 (378)
T ss_dssp HHHHH-STTCEEEEEECC-SS---CC--HHHHHHHHHHEEE-EEEEEEEE
T ss_pred HHHHh-ccCCCCEEEeCC-CC---CH--HHHHHHHHHhcCC-CCEEEEEe
Confidence 33211 135799999643 21 11 2378999999999 99988874
No 266
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.21 E-value=5e-06 Score=75.72 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=51.1
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM 244 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 244 (343)
....+.+.+.+.+.+.++.+|||||||+|.++..+++. +.. .++++|.+..+.+.+++. ...++.++.++..
T Consensus 15 ~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~--~v~avEid~~~~~~~~~~-----~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 15 VSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-PLK--KLYVIELDREMVENLKSI-----GDERLEVINEDAS 86 (249)
T ss_dssp ECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-CCS--EEEEECCCHHHHHHHTTS-----CCTTEEEECSCTT
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-CCC--eEEEEECCHHHHHHHHhc-----cCCCeEEEEcchh
Confidence 34567788888888888999999999999999999874 223 455555555666655543 1235677776444
Q ss_pred Cc
Q 019282 245 DF 246 (343)
Q Consensus 245 dl 246 (343)
.+
T Consensus 87 ~~ 88 (249)
T 3ftd_A 87 KF 88 (249)
T ss_dssp TC
T ss_pred hC
Confidence 43
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.18 E-value=3.4e-07 Score=83.99 Aligned_cols=93 Identities=13% Similarity=0.026 Sum_probs=53.7
Q ss_pred HHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhH-----HHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 173 LAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELS-----LMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~-----~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
+.....+.++.+|||+|||+|..+..++.. ...++++|+++.. .+.+.++++.+.+...+++.++.++..++.
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l 152 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQM 152 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHH
Confidence 333345566789999999999999999984 2345555555500 344444433221111224777776544432
Q ss_pred CCCCC--CceeEEEEccccccC
Q 019282 248 KFGSG--VVYDLIYASAVFLHM 267 (343)
Q Consensus 248 ~~~~~--~~fDlIvs~~v~~hl 267 (343)
....+ ++||+|++..++++.
T Consensus 153 ~~~~~~~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 153 PALVKTQGKPDIVYLDPMYPER 174 (258)
T ss_dssp HHHHHHHCCCSEEEECCCC---
T ss_pred HhhhccCCCccEEEECCCCCCc
Confidence 11112 589999999888664
No 268
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.16 E-value=1.6e-06 Score=84.21 Aligned_cols=106 Identities=13% Similarity=0.009 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCC-cEEEecccCCcCC-CCCCCceeE
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKR-PIIVRGEDMDFTK-FGSGVVYDL 257 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~-~~~~~~~~~dl~~-~~~~~~fDl 257 (343)
.++.+|||++||+|.+++.++.....+ -.++.+|.++...+.++++.+.+...++ +.++.++..++.. . ..+.||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga-~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~-~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCV-EKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE-WGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCE-EEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC-CSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh-hCCCCcE
Confidence 467899999999999999999864321 2345555555555555554443222323 6677665544431 1 2457999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
|++.- + .... .+++.+.+.|+| ||.++++.
T Consensus 129 V~lDP-~---g~~~--~~l~~a~~~Lk~-gGll~~t~ 158 (392)
T 3axs_A 129 VDLDP-F---GTPV--PFIESVALSMKR-GGILSLTA 158 (392)
T ss_dssp EEECC-S---SCCH--HHHHHHHHHEEE-EEEEEEEE
T ss_pred EEECC-C---cCHH--HHHHHHHHHhCC-CCEEEEEe
Confidence 99875 2 1111 278899999999 99998875
No 269
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.16 E-value=3.5e-06 Score=86.30 Aligned_cols=105 Identities=11% Similarity=0.046 Sum_probs=64.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcC--CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLN--PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~--~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.+..|||||||+|-+....+++.. ...+.+..++.++... .+++..+ .+. .+.+.++.++..++ ...++.|+
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N~~-~dkVtVI~gd~eev---~LPEKVDI 431 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFEEW-GSQVTVVSSDMREW---VAPEKADI 431 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHHTT-GGGEEEEESCTTTC---CCSSCEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhccC-CCeEEEEeCcceec---cCCcccCE
Confidence 345799999999999555444332 2334455555555332 2333333 344 44788888854444 44579999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEE
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIF 291 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lv 291 (343)
||+=.+=..+-.+...++|....|.||| ||.++
T Consensus 432 IVSEwMG~fLl~E~mlevL~Ardr~LKP-gGimi 464 (637)
T 4gqb_A 432 IVSELLGSFADNELSPECLDGAQHFLKD-DGVSI 464 (637)
T ss_dssp EECCCCBTTBGGGCHHHHHHHHGGGEEE-EEEEE
T ss_pred EEEEcCcccccccCCHHHHHHHHHhcCC-CcEEc
Confidence 9984332222222334578888999999 99885
No 270
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.16 E-value=3.6e-06 Score=85.08 Aligned_cols=144 Identities=13% Similarity=0.067 Sum_probs=85.4
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC---------------CCceEEEEcChhHHHHHHHHhccc-CC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN---------------PENFHCLERDELSLMAAFRYELPS-QG 230 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~---------------~~~~~vvdid~s~~~~a~a~~~~~-~~ 230 (343)
+.+.+.+.+.+...++ +|||.+||+|.+...+++.+. ...++++++++.....+ +.+.. .+
T Consensus 231 ~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA--~~Nl~l~g 307 (544)
T 3khk_A 231 KSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLA--AMNMVIRG 307 (544)
T ss_dssp HHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHH--HHHHHHTT
T ss_pred HHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHH--HHHHHHhC
Confidence 5566777766666555 999999999999988766442 22344555555444444 43222 33
Q ss_pred CCCCCcEEEecccCCcCCCCCCCceeEEEEcccccc-------------------------CCch--HHHHHHHHHHhcc
Q 019282 231 LLHKRPIIVRGEDMDFTKFGSGVVYDLIYASAVFLH-------------------------MPDK--LVWVGLERLASKL 283 (343)
Q Consensus 231 ~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~h-------------------------l~~~--~~~~~L~~l~r~L 283 (343)
... .+.+..++....+.. ....||+|+++--+.. ++.. ....+++.+.+.|
T Consensus 308 i~~-~i~i~~gDtL~~~~~-~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~L 385 (544)
T 3khk_A 308 IDF-NFGKKNADSFLDDQH-PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHL 385 (544)
T ss_dssp CCC-BCCSSSCCTTTSCSC-TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTE
T ss_pred CCc-ccceeccchhcCccc-ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHh
Confidence 322 221133322222211 3568999999865542 1110 1114899999999
Q ss_pred CCCCcEEEEEeccccccCC--CHHHHHHHHHhcCC
Q 019282 284 RPYDGRIFVSHNIKFCSRL--GGEECTKRLTSLGL 316 (343)
Q Consensus 284 kP~GG~lvi~~~~~~~~~~--~~~~l~~~L~~aGf 316 (343)
+| ||++.+..+..+...- ....+++.|.+.+.
T Consensus 386 k~-gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 386 AP-TGSMALLLANGSMSSNTNNEGEIRKTLVEQDL 419 (544)
T ss_dssp EE-EEEEEEEEETHHHHCCGGGHHHHHHHHHHTTC
T ss_pred cc-CceEEEEecchhhhcCcchHHHHHHHHHhCCc
Confidence 99 9998776543443332 36788888877775
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.15 E-value=1.5e-06 Score=81.58 Aligned_cols=89 Identities=9% Similarity=-0.094 Sum_probs=56.4
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~ 249 (343)
++.+.+.+.+.++.+|||+|||+|..+..+++.++...++++|+|+. +.+.++++..... .++.++.++..++...
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~--al~~A~~~~~~~g--~~v~~v~~d~~~l~~~ 90 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSE--VLRIAEEKLKEFS--DRVSLFKVSYREADFL 90 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHH--HHHHHHHHTGGGT--TTEEEEECCGGGHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHH--HHHHHHHHHHhcC--CcEEEEECCHHHHHHH
Confidence 34444455778889999999999999999999876455555555554 4444444333211 3677777644333211
Q ss_pred CC---CCceeEEEEcc
Q 019282 250 GS---GVVYDLIYASA 262 (343)
Q Consensus 250 ~~---~~~fDlIvs~~ 262 (343)
.. .++||.|++..
T Consensus 91 l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 91 LKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHTTCSCEEEEEEEC
T ss_pred HHhcCCCCCCEEEEcC
Confidence 01 15799999854
No 272
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.15 E-value=7.2e-06 Score=77.10 Aligned_cols=137 Identities=12% Similarity=0.096 Sum_probs=78.0
Q ss_pred hcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCC-C
Q 019282 176 ASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGS-G 252 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~-~ 252 (343)
.+.+.++.+|||+|||+|..+.+++.... ...++++|++....... +++.+ .+. .++.++.++..++..... .
T Consensus 97 ~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~--~~n~~r~g~--~~v~~~~~D~~~~~~~~~~~ 172 (309)
T 2b9e_A 97 LLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASM--ATLLARAGV--SCCELAEEDFLAVSPSDPRY 172 (309)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHH--HHHHHHTTC--CSEEEEECCGGGSCTTCGGG
T ss_pred HhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHH--HHHHHHcCC--CeEEEEeCChHhcCcccccc
Confidence 35788899999999999999999998764 34566666666554444 33322 343 246666664444432111 1
Q ss_pred CceeEEEEc------cccccCCch----------------HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHH
Q 019282 253 VVYDLIYAS------AVFLHMPDK----------------LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKR 310 (343)
Q Consensus 253 ~~fDlIvs~------~v~~hl~~~----------------~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~ 310 (343)
+.||.|++. .++..-++. ....+|+.+.+++ + ||+++.+.-. ....-..+.+...
T Consensus 173 ~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l-~-gG~lvYsTCs-~~~~Ene~~v~~~ 249 (309)
T 2b9e_A 173 HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFP-S-LQRLVYSTCS-LCQEENEDVVRDA 249 (309)
T ss_dssp TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCT-T-CCEEEEEESC-CCGGGTHHHHHHH
T ss_pred CCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcc-C-CCEEEEECCC-CChHHhHHHHHHH
Confidence 479999973 222221111 1123677777777 5 8888765310 1111125566677
Q ss_pred HHhc-C-CcEE
Q 019282 311 LTSL-G-LEYI 319 (343)
Q Consensus 311 L~~a-G-f~~v 319 (343)
|++. + |+.+
T Consensus 250 l~~~~~~~~~~ 260 (309)
T 2b9e_A 250 LQQNPGAFRLA 260 (309)
T ss_dssp HTTSTTTEEEC
T ss_pred HHhCCCcEEEe
Confidence 7665 4 6654
No 273
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.14 E-value=1.3e-05 Score=74.70 Aligned_cols=137 Identities=20% Similarity=0.231 Sum_probs=87.5
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc--CC-CCCCCcEEEecccCCcCCCCCCCcee
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS--QG-LLHKRPIIVRGEDMDFTKFGSGVVYD 256 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~--~~-~~~~~~~~~~~~~~dl~~~~~~~~fD 256 (343)
+...+||=||.|.|..+..++++.+...+++++||+.-...+.. -+.. .+ ..+.++.++.++...+..- ..++||
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~-~lp~~~~~~~~dpRv~v~~~Dg~~~l~~-~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQ-YLPNHNAGSYDDPRFKLVIDDGVNFVNQ-TSQTFD 159 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHH-HCHHHHTTGGGCTTEEEEESCTTTTTSC-SSCCEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHh-cCccccccccCCCcEEEEechHHHHHhh-ccccCC
Confidence 34579999999999999999987777789999999866655532 1211 12 3345777777766666533 467899
Q ss_pred EEEEccccccCCch--HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 257 LIYASAVFLHMPDK--LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 257 lIvs~~v~~hl~~~--~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
+|+.-..-..-+.. ....+++.++++|+| ||+++......+...-....+.+.+.+. |..+.
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p-~Gv~v~q~~sp~~~~~~~~~~~~~l~~~-F~~v~ 223 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNP-GGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSDVG 223 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEE-EEEEEEEEEESSSCCHHHHHHHHHHHHH-CSEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCC-CCEEEEecCCcccChHHHHHHHHHHHhh-CCcee
Confidence 99975322111110 112489999999999 9999886543333221123344455554 55544
No 274
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.13 E-value=4.2e-05 Score=73.92 Aligned_cols=140 Identities=12% Similarity=0.120 Sum_probs=84.8
Q ss_pred CCeEEEEcCCcCHHHHHHHHHc---------------CCCceEEEEcChh-----------HHHHHHHHhcccCCCCCCC
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYL---------------NPENFHCLERDEL-----------SLMAAFRYELPSQGLLHKR 235 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~---------------~~~~~~vvdid~s-----------~~~~a~a~~~~~~~~~~~~ 235 (343)
..+|+|+||++|..+..+.... +...+.++--|.. +......++ ..+... .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~--~~g~~~-~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK--ENGRKI-G 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH--HTCCCT-T
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh--hccCCC-C
Confidence 5789999999999999887751 0123444444433 111111111 111111 3
Q ss_pred cEEEecccCCcC-CCCCCCceeEEEEccccccCCchH-------------------------------------HHHHHH
Q 019282 236 PIIVRGEDMDFT-KFGSGVVYDLIYASAVFLHMPDKL-------------------------------------VWVGLE 277 (343)
Q Consensus 236 ~~~~~~~~~dl~-~~~~~~~fDlIvs~~v~~hl~~~~-------------------------------------~~~~L~ 277 (343)
..++.+....|- ...+++++|+|+++.++||+.+.. ...+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 455555333432 123578999999999999985431 112367
Q ss_pred HHHhccCCCCcEEEEEe----cc--c---------------------------cc-cC--CCHHHHHHHHHhcC-CcEEE
Q 019282 278 RLASKLRPYDGRIFVSH----NI--K---------------------------FC-SR--LGGEECTKRLTSLG-LEYIG 320 (343)
Q Consensus 278 ~l~r~LkP~GG~lvi~~----~~--~---------------------------~~-~~--~~~~~l~~~L~~aG-f~~v~ 320 (343)
..++.|+| ||+++++. .. + +. .. ...++++..+++.| |++..
T Consensus 210 ~Ra~eL~p-GG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~ 288 (384)
T 2efj_A 210 IHSEELIS-RGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILY 288 (384)
T ss_dssp HHHHHEEE-EEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHhcc-CCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEE
Confidence 77999999 99999873 11 1 00 11 12899999999985 88877
Q ss_pred eeecc
Q 019282 321 KKTHD 325 (343)
Q Consensus 321 ~~~~~ 325 (343)
.+.+.
T Consensus 289 le~~~ 293 (384)
T 2efj_A 289 LETFN 293 (384)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66543
No 275
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.12 E-value=5.6e-06 Score=76.73 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=52.0
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCC--CceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecc
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNP--ENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGE 242 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~--~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~ 242 (343)
....+.+.+.+.+.+.++.+|||||||+|.++..+++.... ..++++|+|+.....+ ++.. ..++.++.++
T Consensus 26 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a--~~~~-----~~~v~~i~~D 98 (279)
T 3uzu_A 26 VDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRL--EQRF-----GELLELHAGD 98 (279)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHH--HHHH-----GGGEEEEESC
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHH--HHhc-----CCCcEEEECC
Confidence 34557777888888889999999999999999999986532 2367777776555444 4321 2256677765
Q ss_pred cCCc
Q 019282 243 DMDF 246 (343)
Q Consensus 243 ~~dl 246 (343)
..++
T Consensus 99 ~~~~ 102 (279)
T 3uzu_A 99 ALTF 102 (279)
T ss_dssp GGGC
T ss_pred hhcC
Confidence 4443
No 276
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.10 E-value=4.4e-06 Score=76.94 Aligned_cols=118 Identities=13% Similarity=0.087 Sum_probs=70.1
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
.++..|.+...++++.+|||+|||+|.++..++...+...+.++++........ ..... ....+..+.. ..++.
T Consensus 77 fKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~p----i~~~~-~g~~ii~~~~-~~dv~ 150 (282)
T 3gcz_A 77 AKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKP----IMRTT-LGWNLIRFKD-KTDVF 150 (282)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCC----CCCCB-TTGGGEEEEC-SCCGG
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccc----ccccc-CCCceEEeeC-Ccchh
Confidence 355555566688899999999999999999888644333444444433210000 00000 1112222221 22443
Q ss_pred CCCCCCceeEEEEccccccCCchHHH-----HHHHHHHhccCCCC--cEEEEEe
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVW-----VGLERLASKLRPYD--GRIFVSH 294 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~-----~~L~~l~r~LkP~G--G~lvi~~ 294 (343)
.+ ..+++|+|+|..+.. .+....+ .+|+-+.++|+| | |.|++-.
T Consensus 151 ~l-~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~-g~~G~Fv~Kv 201 (282)
T 3gcz_A 151 NM-EVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQE-GNYTEFCIKV 201 (282)
T ss_dssp GS-CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHH-HCCCEEEEEE
T ss_pred hc-CCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCC-CCCCcEEEEE
Confidence 33 357899999987776 5443222 356677899999 9 9998854
No 277
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.06 E-value=2.3e-05 Score=81.63 Aligned_cols=126 Identities=10% Similarity=0.036 Sum_probs=80.3
Q ss_pred cchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHc----------------------------------------
Q 019282 164 AGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYL---------------------------------------- 203 (343)
Q Consensus 164 ~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~---------------------------------------- 203 (343)
++.+.+...+......+++..|||.+||+|.+++.++...
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 4566777778877788888999999999999999887642
Q ss_pred --CCCceEEEEcChhHHHHHHHHhccc-CCCCCCCcEEEecccCCcCCCCCCCceeEEEEcccccc-CC-chHHHHH---
Q 019282 204 --NPENFHCLERDELSLMAAFRYELPS-QGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASAVFLH-MP-DKLVWVG--- 275 (343)
Q Consensus 204 --~~~~~~vvdid~s~~~~a~a~~~~~-~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~h-l~-~~~~~~~--- 275 (343)
....++++|+|+.....+. .+.. .|+. ..+.+..++..++......+.||+|+++--+.. +. ......+
T Consensus 253 ~~~~~~i~G~Did~~av~~A~--~N~~~agv~-~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRAR--TNARLAGIG-ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHH--HHHHHTTCG-GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHH--HHHHHcCCC-CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 1135677777776665554 3333 4443 256777765555432212338999999866532 22 2222223
Q ss_pred HHHHHhccCCCCcEEEEE
Q 019282 276 LERLASKLRPYDGRIFVS 293 (343)
Q Consensus 276 L~~l~r~LkP~GG~lvi~ 293 (343)
+.++.+.+.| ||.+++.
T Consensus 330 l~~~lk~~~~-g~~~~il 346 (703)
T 3v97_A 330 LGRIMKNQFG-GWNLSLF 346 (703)
T ss_dssp HHHHHHHHCT-TCEEEEE
T ss_pred HHHHHHhhCC-CCeEEEE
Confidence 4455566679 9998775
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.05 E-value=6.5e-06 Score=75.15 Aligned_cols=95 Identities=17% Similarity=0.184 Sum_probs=55.8
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
..+.+.+.+.+.+.++.+|||||||+|.++. +.. .....++++|+|+ .+.+.+++.... ..++.++.++..++
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~--~~~~~a~~~~~~---~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDR--DLAARLQTHPFL---GPKLTIYQQDAMTF 79 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCH--HHHHHHHTCTTT---GGGEEEECSCGGGC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCH--HHHHHHHHHhcc---CCceEEEECchhhC
Confidence 3466777777788889999999999999999 654 2211155555555 555555543321 12566676644433
Q ss_pred CCCCC----CCceeEEEEccccccCCch
Q 019282 247 TKFGS----GVVYDLIYASAVFLHMPDK 270 (343)
Q Consensus 247 ~~~~~----~~~fDlIvs~~v~~hl~~~ 270 (343)
. +.. .+..|.|+++..+ +++.+
T Consensus 80 ~-~~~~~~~~~~~~~vvsNlPY-~i~~~ 105 (252)
T 1qyr_A 80 N-FGELAEKMGQPLRVFGNLPY-NISTP 105 (252)
T ss_dssp C-HHHHHHHHTSCEEEEEECCT-TTHHH
T ss_pred C-HHHhhcccCCceEEEECCCC-CccHH
Confidence 2 110 0134677776554 45444
No 279
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.03 E-value=5.4e-05 Score=79.05 Aligned_cols=133 Identities=13% Similarity=0.063 Sum_probs=81.0
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcC---CCceEEEEcChhHHHHHHHHhcccC-CCCC--CCcEEEecccCCcCC--CC
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLN---PENFHCLERDELSLMAAFRYELPSQ-GLLH--KRPIIVRGEDMDFTK--FG 250 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~---~~~~~vvdid~s~~~~a~a~~~~~~-~~~~--~~~~~~~~~~~dl~~--~~ 250 (343)
.+++.+|||.|||+|.++..+++.++ ...++++|+++.....+..+..... +... ....+. + .++.. ..
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~-~--dD~L~~~~~ 395 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTIT-G--EDVCSLNPE 395 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEE-C--CCGGGCCGG
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEE-e--cchhccccc
Confidence 45678999999999999999988764 3467788888876665522221111 1111 111222 2 23322 11
Q ss_pred CCCceeEEEEcccccc-CCch--------------------------HHHHHHHHHHhccCCCCcEEEEEeccccccCCC
Q 019282 251 SGVVYDLIYASAVFLH-MPDK--------------------------LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLG 303 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~h-l~~~--------------------------~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~ 303 (343)
..+.||+|+++--+.. .... ....+++.+.+.|+| ||++.+..+..+...-+
T Consensus 396 ~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKp-GGrLAfIlP~s~Lf~sg 474 (878)
T 3s1s_A 396 DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQD-GTVISAIMPKQYLTAQG 474 (878)
T ss_dssp GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCT-TCEEEEEEETHHHHCCS
T ss_pred ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCC-CcEEEEEEChHHhccCC
Confidence 3468999999866621 1110 122368889999999 99998776555553323
Q ss_pred --HHHHHHHHHhcC
Q 019282 304 --GEECTKRLTSLG 315 (343)
Q Consensus 304 --~~~l~~~L~~aG 315 (343)
...+++.|.+.+
T Consensus 475 ~~~kkLRk~LLe~~ 488 (878)
T 3s1s_A 475 NESKAFREFLVGNF 488 (878)
T ss_dssp HHHHHHHHHHTTTT
T ss_pred hHHHHHHHHHHhCC
Confidence 567777775543
No 280
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.01 E-value=5.5e-05 Score=76.39 Aligned_cols=146 Identities=12% Similarity=0.056 Sum_probs=90.5
Q ss_pred HHHHHHHHhcC----CCCCCeEEEEcCCcCHHHHHHHHHcC---CCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEe
Q 019282 168 DVFEFLAEASH----ITPNSHVLEIGCGTLRVGVHFIRYLN---PENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVR 240 (343)
Q Consensus 168 ~~~~~l~~~~~----l~~~~rVLDIGCGtG~~a~~la~~~~---~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~ 240 (343)
.+.+.+.+.+. ..++.+|||.+||+|.+...+++.+. ...++++++++.....+..+- ...+.......+..
T Consensus 204 ~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl-~l~gi~~~~~~I~~ 282 (542)
T 3lkd_A 204 PVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNM-ILHGVPIENQFLHN 282 (542)
T ss_dssp HHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHH-HHTTCCGGGEEEEE
T ss_pred HHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHH-HHcCCCcCccceEe
Confidence 34444444433 34678999999999999999888753 356778888777666664432 22333222345565
Q ss_pred cccCCc--CCCCCCCceeEEEEcccccc-------------------CCc--hHHHHHHHHHHhccC-CCCcEEEEEecc
Q 019282 241 GEDMDF--TKFGSGVVYDLIYASAVFLH-------------------MPD--KLVWVGLERLASKLR-PYDGRIFVSHNI 296 (343)
Q Consensus 241 ~~~~dl--~~~~~~~~fDlIvs~~v~~h-------------------l~~--~~~~~~L~~l~r~Lk-P~GG~lvi~~~~ 296 (343)
++.... +.. ....||+|+++--+.. ++. .....++..+.+.|+ | ||++.+..+.
T Consensus 283 gDtL~~d~p~~-~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~-gGr~a~VlP~ 360 (542)
T 3lkd_A 283 ADTLDEDWPTQ-EPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQD-NGVMAIVLPH 360 (542)
T ss_dssp SCTTTSCSCCS-SCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTT-TCEEEEEEET
T ss_pred cceeccccccc-ccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCC-ceeEEEEecc
Confidence 543332 211 3568999999744421 100 001237999999999 9 9999776544
Q ss_pred ccccCCC-HHHHHHHHHhcCC
Q 019282 297 KFCSRLG-GEECTKRLTSLGL 316 (343)
Q Consensus 297 ~~~~~~~-~~~l~~~L~~aGf 316 (343)
.+...-+ ...+++.|.+.+.
T Consensus 361 g~Lf~~~~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 361 GVLFRGNAEGTIRKALLEEGA 381 (542)
T ss_dssp HHHHCCTHHHHHHHHHHHTTC
T ss_pred hHhhCCchhHHHHHHHHhCCc
Confidence 4432223 5778888877765
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.00 E-value=7.2e-06 Score=84.35 Aligned_cols=109 Identities=10% Similarity=0.039 Sum_probs=64.3
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcC--C---------CceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC-
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLN--P---------ENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF- 249 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~--~---------~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~- 249 (343)
+..|||||||+|.+....+++.. + ....++.++.++......+.....+. .+.+.++.++..++.-.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~-~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTW-KRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTT-TTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCC-CCeEEEEeCchhhccccc
Confidence 45799999999999754333221 0 22345555555433322222223344 34788888865555410
Q ss_pred --CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEE
Q 019282 250 --GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 250 --~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
...++.|+|++-.+=.....+.....|..+.+.||| ||.++=
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp-~Gi~iP 532 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKP-TTISIP 532 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCT-TCEEES
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCC-CcEEEC
Confidence 014689999996553333333334477788899999 998763
No 282
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.90 E-value=4e-05 Score=67.63 Aligned_cols=100 Identities=13% Similarity=-0.009 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCCC-CCCcEEEecccCCc-----------
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGLL-HKRPIIVRGEDMDF----------- 246 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~~-~~~~~~~~~~~~dl----------- 246 (343)
.+..+||||||| .-+..+++. ....++.++.|+ ...+.+++..+ .+.. ..++.++.++..+.
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~--~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~ 103 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDR--AWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAK 103 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCH--HHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTT
T ss_pred hCCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCH--HHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchh
Confidence 356799999985 677777773 234555555555 44444444333 4430 33666776654332
Q ss_pred ----CC-------CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEE
Q 019282 247 ----TK-------FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 247 ----~~-------~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
+. ....++||+|+.-.-.. ...+..+.+.|+| ||++++
T Consensus 104 ~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-------~~~~~~~l~~l~~-GG~Iv~ 152 (202)
T 3cvo_A 104 WRSYPDYPLAVWRTEGFRHPDVVLVDGRFR-------VGCALATAFSITR-PVTLLF 152 (202)
T ss_dssp GGGTTHHHHGGGGCTTCCCCSEEEECSSSH-------HHHHHHHHHHCSS-CEEEEE
T ss_pred hhhHHHHhhhhhccccCCCCCEEEEeCCCc-------hhHHHHHHHhcCC-CeEEEE
Confidence 11 11236899999876431 2367778899999 998844
No 283
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.84 E-value=3.1e-06 Score=77.64 Aligned_cols=107 Identities=18% Similarity=0.198 Sum_probs=61.1
Q ss_pred HHHHHhcCCCCC--CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHH-------HhcccCCC-CCCCcEEEe
Q 019282 171 EFLAEASHITPN--SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFR-------YELPSQGL-LHKRPIIVR 240 (343)
Q Consensus 171 ~~l~~~~~l~~~--~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a-------~~~~~~~~-~~~~~~~~~ 240 (343)
+.+.+.+.++++ .+|||+|||+|..+..++.. . ..++++++++ ...+.. +.....+. ...++.++.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g-~~V~~vE~~~--~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-G-CRVRMLERNP--VVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-T-CCEEEEECCH--HHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-C-CEEEEEECCH--HHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 334445667777 89999999999999999985 2 3455555554 332221 11111100 112567777
Q ss_pred cccCCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCC
Q 019282 241 GEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRP 285 (343)
Q Consensus 241 ~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP 285 (343)
++..++.... .+.||+|++.-++.+-.. . ..+++..+.|++
T Consensus 152 ~D~~~~L~~~-~~~fDvV~lDP~y~~~~~-s--aavkk~~~~lr~ 192 (258)
T 2oyr_A 152 ASSLTALTDI-TPRPQVVYLDPMFPHKQK-S--ALVKKEMRVFQS 192 (258)
T ss_dssp SCHHHHSTTC-SSCCSEEEECCCCCCCCC--------HHHHHHHH
T ss_pred CCHHHHHHhC-cccCCEEEEcCCCCCccc-c--hHHHHHHHHHHH
Confidence 7655543221 247999999988866432 2 245556666665
No 284
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.84 E-value=8.5e-05 Score=68.82 Aligned_cols=116 Identities=14% Similarity=0.067 Sum_probs=66.6
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC-CCCCCCcEEEecccCCcC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ-GLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~-~~~~~~~~~~~~~~~dl~ 247 (343)
++..+.+..-++++.+|||+||++|.++..+++..+...+.++++... +. ..... ......+.... ...++.
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~--~~----~~P~~~~~~~~~iv~~~-~~~di~ 141 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIE--GH----EKPIHMQTLGWNIVKFK-DKSNVF 141 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT--TS----CCCCCCCBTTGGGEEEE-CSCCTT
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccc--cc----cccccccccCCceEEee-cCceee
Confidence 333444444567889999999999999999987433333344444321 10 00000 00011222222 122333
Q ss_pred CCCCCCceeEEEEccccccCCchHH-----HHHHHHHHhccCCCC-cEEEEEe
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLV-----WVGLERLASKLRPYD-GRIFVSH 294 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~-----~~~L~~l~r~LkP~G-G~lvi~~ 294 (343)
.+ ..+.+|+|+|..... .+.... ..+|+-+.++|+| | |.|++-.
T Consensus 142 ~l-~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~Lkp-G~G~FV~Kv 191 (300)
T 3eld_A 142 TM-PTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHV-NTENFCVKV 191 (300)
T ss_dssp TS-CCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCT-TCCEEEEEE
T ss_pred ec-CCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcC-CCCcEEEEe
Confidence 33 356899999987765 544322 2346677899999 9 9998863
No 285
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.79 E-value=6e-05 Score=68.50 Aligned_cols=120 Identities=16% Similarity=0.124 Sum_probs=70.2
Q ss_pred CCccchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCc--eEEEEcChhHHHHHHHHhcccCCC-CCCCc-
Q 019282 161 EPWAGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPEN--FHCLERDELSLMAAFRYELPSQGL-LHKRP- 236 (343)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~--~~vvdid~s~~~~a~a~~~~~~~~-~~~~~- 236 (343)
.+.+.+-.++..|.+..-++|+.+|||+||++|.++...++..+-.. -+++++|. . ...-... .+-+.
T Consensus 53 ~yRSRAayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-------~~P~~~~~~Gv~~i 124 (269)
T 2px2_A 53 HPVSRGTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-------EEPMLMQSYGWNIV 124 (269)
T ss_dssp CCSSTHHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-------CCCCCCCSTTGGGE
T ss_pred CcccHHHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-------cCCCcccCCCceEE
Confidence 33344555666677766789999999999999999998887411111 23344442 0 0000000 01012
Q ss_pred EEEecccCCcCCCCCCCceeEEEEccccccCCchHHH-----HHHHHHHhccCCCCc-EEEEE
Q 019282 237 IIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPDKLVW-----VGLERLASKLRPYDG-RIFVS 293 (343)
Q Consensus 237 ~~~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~-----~~L~~l~r~LkP~GG-~lvi~ 293 (343)
.+..+ .|+.+. ...++|+|+|-.... .+....+ .+|+-+.++|+| || .|++-
T Consensus 125 ~~~~G--~Df~~~-~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~-gG~~FvvK 182 (269)
T 2px2_A 125 TMKSG--VDVFYK-PSEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSR-GPKEFCIK 182 (269)
T ss_dssp EEECS--CCGGGS-CCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred Eeecc--CCccCC-CCCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhc-CCcEEEEE
Confidence 33323 355543 245899999977664 4443322 246667799999 99 78774
No 286
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.70 E-value=9.4e-06 Score=79.12 Aligned_cols=78 Identities=13% Similarity=0.035 Sum_probs=49.6
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccC---CCCCCCcEEEecccCCcCCCCCCCce
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQ---GLLHKRPIIVRGEDMDFTKFGSGVVY 255 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~---~~~~~~~~~~~~~~~dl~~~~~~~~f 255 (343)
+.++.+|||+|||+|..+..+++. +..++++|.++.+.+.++++... +. .++.++.++..++.....+++|
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~----g~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~~~L~~~~~~~f 164 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK----ASQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFKEYLPLIKTFHP 164 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGGGSHHHHHHHCC
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc----CCEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHHHhhhhccCCCc
Confidence 345889999999999999988873 33455555555555555554332 33 3577777755443111013589
Q ss_pred eEEEEcc
Q 019282 256 DLIYASA 262 (343)
Q Consensus 256 DlIvs~~ 262 (343)
|+|++.-
T Consensus 165 DvV~lDP 171 (410)
T 3ll7_A 165 DYIYVDP 171 (410)
T ss_dssp SEEEECC
T ss_pred eEEEECC
Confidence 9999863
No 287
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.68 E-value=7.2e-05 Score=71.65 Aligned_cols=110 Identities=16% Similarity=0.225 Sum_probs=67.4
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHc--------------CCCceE--EEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYL--------------NPENFH--CLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM 244 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~--------------~~~~~~--vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 244 (343)
...+|+|+||++|..+..+.... +...+. ..|+....-...+. .+.... ...+..++.+...
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~-~L~~~~-~~~~~~f~~gvpg 128 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFR-SLPIEN-DVDGVCFINGVPG 128 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHT-TTTTSC-SCTTCEEEEEEES
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHH-hcchhc-ccCCCEEEEecch
Confidence 34689999999998887665431 122344 44444444333322 211100 1113445554333
Q ss_pred CcC-CCCCCCceeEEEEccccccCCch-------------------------------HHHHHHHHHHhccCCCCcEEEE
Q 019282 245 DFT-KFGSGVVYDLIYASAVFLHMPDK-------------------------------LVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 245 dl~-~~~~~~~fDlIvs~~v~~hl~~~-------------------------------~~~~~L~~l~r~LkP~GG~lvi 292 (343)
.|- ...+++++|+|+++.++||+.+. ++..+|+..++.|+| ||++++
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p-GG~mvl 207 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP-GGRMVL 207 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT-TCEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEE
Confidence 432 22357899999999999998541 233468889999999 999998
Q ss_pred E
Q 019282 293 S 293 (343)
Q Consensus 293 ~ 293 (343)
+
T Consensus 208 ~ 208 (359)
T 1m6e_X 208 T 208 (359)
T ss_dssp E
T ss_pred E
Confidence 7
No 288
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.64 E-value=0.00031 Score=64.98 Aligned_cols=121 Identities=14% Similarity=0.065 Sum_probs=72.5
Q ss_pred cchHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc
Q 019282 164 AGGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED 243 (343)
Q Consensus 164 ~~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~ 243 (343)
+.+-.++..+.+...++++.+||||||++|.++.+.+...... .|.++|....... +-..-+.+.-+.+.+..+
T Consensus 77 SR~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~--~V~avdvG~~~he--~P~~~~ql~w~lV~~~~~-- 150 (321)
T 3lkz_A 77 SRGTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQ--EVRGYTKGGPGHE--EPQLVQSYGWNIVTMKSG-- 150 (321)
T ss_dssp STHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEE--EEEEECCCSTTSC--CCCCCCBTTGGGEEEECS--
T ss_pred chHHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCC--EEEEEEcCCCCcc--CcchhhhcCCcceEEEec--
Confidence 3345566667777788999999999999999999887754433 3555554221000 000000111123455544
Q ss_pred CCcCCCCCCCceeEEEEccccccCCchHHH-----HHHHHHHhccCCCC-cEEEEE
Q 019282 244 MDFTKFGSGVVYDLIYASAVFLHMPDKLVW-----VGLERLASKLRPYD-GRIFVS 293 (343)
Q Consensus 244 ~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~-----~~L~~l~r~LkP~G-G~lvi~ 293 (343)
.|+.... ..++|.|+|--. +--+.+..+ .+|+-+.+.|++ | |.++|-
T Consensus 151 ~Dv~~l~-~~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~-~~~~f~~K 203 (321)
T 3lkz_A 151 VDVFYRP-SECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHR-GPREFCVK 203 (321)
T ss_dssp CCTTSSC-CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTT-CCCEEEEE
T ss_pred cCHhhCC-CCCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhcc-CCCcEEEE
Confidence 3443332 367999999665 555554322 367777899999 8 877774
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.61 E-value=0.00065 Score=65.06 Aligned_cols=121 Identities=10% Similarity=0.066 Sum_probs=73.0
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
.+++|.++||+||++|.++..+++ .+..|+++|..++..... ...++.++.++...+. +..+.||+
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~----rg~~V~aVD~~~l~~~l~--------~~~~V~~~~~d~~~~~--~~~~~~D~ 273 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVK----RNMWVYSVDNGPMAQSLM--------DTGQVTWLREDGFKFR--PTRSNISW 273 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHH----TTCEEEEECSSCCCHHHH--------TTTCEEEECSCTTTCC--CCSSCEEE
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHH----CCCEEEEEEhhhcChhhc--------cCCCeEEEeCcccccc--CCCCCcCE
Confidence 367899999999999999999988 456788888755433222 1235677766544443 23568999
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCC--CcEEEEEeccccccCC-----CHHHHHHHHHhcCCcEE
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPY--DGRIFVSHNIKFCSRL-----GGEECTKRLTSLGLEYI 319 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~--GG~lvi~~~~~~~~~~-----~~~~l~~~L~~aGf~~v 319 (343)
|+|-.+.. +.. .+..+.+.|... ++.+ ++-......++ ..+.+.+.++..||...
T Consensus 274 vvsDm~~~----p~~--~~~l~~~wl~~~~~~~aI-~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~~ 335 (375)
T 4auk_A 274 MVCDMVEK----PAK--VAALMAQWLVNGWCRETI-FNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQ 335 (375)
T ss_dssp EEECCSSC----HHH--HHHHHHHHHHTTSCSEEE-EEEECCSSSHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEcCCCC----hHH--hHHHHHHHHhccccceEE-EEEEecccchHHHHHHHHHHHHHHHHhcCcchh
Confidence 99976552 222 344444444440 3443 33211111111 15567778888998743
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.57 E-value=0.00024 Score=65.78 Aligned_cols=130 Identities=10% Similarity=0.042 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcC-----CCceEEEEcChh-----------H-------------HHHHHHHh-cccC
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLN-----PENFHCLERDEL-----------S-------------LMAAFRYE-LPSQ 229 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~-----~~~~~vvdid~s-----------~-------------~~~a~a~~-~~~~ 229 (343)
....+|||+|+..|..+..++..++ ...++++|.... . ...+.+++ +.+.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3446999999999999999887652 566777775310 0 01112222 2334
Q ss_pred CCCCCCcEEEecccCCc-CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCC-HHHH
Q 019282 230 GLLHKRPIIVRGEDMDF-TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLG-GEEC 307 (343)
Q Consensus 230 ~~~~~~~~~~~~~~~dl-~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~-~~~l 307 (343)
++...++.++.++..+. +.. ..++||+|+.-.-. . .....+|+.+.+.|+| ||++++-. ..+ ..+ ...+
T Consensus 185 gl~~~~I~li~Gda~etL~~~-~~~~~d~vfIDaD~---y-~~~~~~Le~~~p~L~p-GGiIv~DD-~~~--~~G~~~Av 255 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTA-PIDTLAVLRMDGDL---Y-ESTWDTLTNLYPKVSV-GGYVIVDD-YMM--CPPCKDAV 255 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTC-CCCCEEEEEECCCS---H-HHHHHHHHHHGGGEEE-EEEEEESS-CTT--CHHHHHHH
T ss_pred CCCcCceEEEEeCHHHHHhhC-CCCCEEEEEEcCCc---c-ccHHHHHHHHHhhcCC-CEEEEEcC-CCC--CHHHHHHH
Confidence 55435788888855443 322 35689999886531 1 1233589999999999 88776542 221 011 5667
Q ss_pred HHHHHhcCCcE
Q 019282 308 TKRLTSLGLEY 318 (343)
Q Consensus 308 ~~~L~~aGf~~ 318 (343)
.+.+++.|.+.
T Consensus 256 ~Ef~~~~~i~~ 266 (282)
T 2wk1_A 256 DEYRAKFDIAD 266 (282)
T ss_dssp HHHHHHTTCCS
T ss_pred HHHHHhcCCce
Confidence 77788888653
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.49 E-value=0.00055 Score=68.88 Aligned_cols=145 Identities=21% Similarity=0.190 Sum_probs=87.8
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-------------CCceEEEEcChhHHHHHHHHhcccCCCCC
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN-------------PENFHCLERDELSLMAAFRYELPSQGLLH 233 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-------------~~~~~vvdid~s~~~~a~a~~~~~~~~~~ 233 (343)
+.+.+.+.+.+...++.+|+|-+||+|.+.....+++. ...+++.++++.....+..+-.. .+..
T Consensus 203 ~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~l-hg~~- 280 (530)
T 3ufb_A 203 RPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLL-HGLE- 280 (530)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHH-HTCS-
T ss_pred HHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHh-cCCc-
Confidence 56777788778888889999999999999988776542 24577888887776666443221 2332
Q ss_pred CCcEEEecccCCcC--CCCCCCceeEEEEccccccCCc--------------hHHHHHHHHHHhccC-------CCCcEE
Q 019282 234 KRPIIVRGEDMDFT--KFGSGVVYDLIYASAVFLHMPD--------------KLVWVGLERLASKLR-------PYDGRI 290 (343)
Q Consensus 234 ~~~~~~~~~~~dl~--~~~~~~~fDlIvs~~v~~hl~~--------------~~~~~~L~~l~r~Lk-------P~GG~l 290 (343)
...+..++....+ +......||+|+++--|.--.. .....++..+.+.|| | ||++
T Consensus 281 -~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~-gGr~ 358 (530)
T 3ufb_A 281 -YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN-GGRA 358 (530)
T ss_dssp -CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS-CCEE
T ss_pred -cccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC-CceE
Confidence 2233433332221 1112457999999866631111 112236777777775 8 9998
Q ss_pred EEEeccccccCCC-HHHHHHHHHhcC
Q 019282 291 FVSHNIKFCSRLG-GEECTKRLTSLG 315 (343)
Q Consensus 291 vi~~~~~~~~~~~-~~~l~~~L~~aG 315 (343)
.+..+..+...-+ ...+++.|-+.+
T Consensus 359 avVlP~g~Lf~~~~~~~iRk~Lle~~ 384 (530)
T 3ufb_A 359 AVVVPNGTLFSDGISARIKEELLKNF 384 (530)
T ss_dssp EEEEEHHHHHCCTHHHHHHHHHHHHS
T ss_pred EEEecchhhhccchHHHHHHHHhhcC
Confidence 7764433322222 456777776554
No 292
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.33 E-value=0.00083 Score=62.78 Aligned_cols=131 Identities=12% Similarity=0.118 Sum_probs=75.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHH----HcCCCceEEEEcChhHH-------------HHHHHHhcccCCCCCCCc--EEEec
Q 019282 181 PNSHVLEIGCGTLRVGVHFIR----YLNPENFHCLERDELSL-------------MAAFRYELPSQGLLHKRP--IIVRG 241 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~----~~~~~~~~vvdid~s~~-------------~~a~a~~~~~~~~~~~~~--~~~~~ 241 (343)
+.-+|||+|-|||........ .-+...++.+.++..++ .......... ....++ .+..+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~--~~~~~v~L~l~~G 173 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPE--YEGERLSLKVLLG 173 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSE--EECSSEEEEEEES
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcc--ccCCcEEEEEEec
Confidence 346899999999997654433 22445566666653211 1111111111 111122 23334
Q ss_pred ccCC-cCCCCCCCceeEEEEcc-ccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEE
Q 019282 242 EDMD-FTKFGSGVVYDLIYASA-VFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYI 319 (343)
Q Consensus 242 ~~~d-l~~~~~~~~fDlIvs~~-v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v 319 (343)
++.+ ++++ .+..||+|+.-. ....-|+-....+|+.++++++| ||++.- . + ....++..|+++||++.
T Consensus 174 Da~~~l~~l-~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~p-gg~laT-Y----t---aag~VRR~L~~aGF~V~ 243 (308)
T 3vyw_A 174 DARKRIKEV-ENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDE-KGYWVS-Y----S---SSLSVRKSLLTLGFKVG 243 (308)
T ss_dssp CHHHHGGGC-CSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEE-EEEEEE-S----C---CCHHHHHHHHHTTCEEE
T ss_pred hHHHHHhhh-cccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCC-CcEEEE-E----e---CcHHHHHHHHHCCCEEE
Confidence 3322 2333 244799999854 23233444445799999999999 998752 1 1 14568889999999987
Q ss_pred Eeee
Q 019282 320 GKKT 323 (343)
Q Consensus 320 ~~~~ 323 (343)
+...
T Consensus 244 k~~G 247 (308)
T 3vyw_A 244 SSRE 247 (308)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 7654
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.30 E-value=0.0024 Score=57.29 Aligned_cols=119 Identities=13% Similarity=0.121 Sum_probs=70.3
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM 244 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 244 (343)
.+-.++..+.+...++++.+|||+||++|.++.+.+....... |.++|........-+ .-+.+--+.+.+..+ .
T Consensus 62 Ra~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~--V~avdvG~~ghe~P~--~~~s~gwn~v~fk~g--v 135 (267)
T 3p8z_A 62 RGSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTE--VRGYTKGGPGHEEPV--PMSTYGWNIVKLMSG--K 135 (267)
T ss_dssp THHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEE--EEEECCCSTTSCCCC--CCCCTTTTSEEEECS--C
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCE--EEEEecCCCCccCcc--hhhhcCcCceEEEec--c
Confidence 3445666677777889999999999999999998887554443 455554221111000 001111235566655 3
Q ss_pred CcCCCCCCCceeEEEEccccccCCchHH-----HHHHHHHHhccCCCCcEEEEE
Q 019282 245 DFTKFGSGVVYDLIYASAVFLHMPDKLV-----WVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 245 dl~~~~~~~~fDlIvs~~v~~hl~~~~~-----~~~L~~l~r~LkP~GG~lvi~ 293 (343)
|+... ...++|.|+|...- --+.+.. ..+|+-+.+.|++ |.++|-
T Consensus 136 Dv~~~-~~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~--~~fc~K 185 (267)
T 3p8z_A 136 DVFYL-PPEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN--NQFCIK 185 (267)
T ss_dssp CGGGC-CCCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS--CEEEEE
T ss_pred ceeec-CCccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc--CCEEEE
Confidence 43322 23679999996555 3343321 2367777899998 566553
No 294
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.15 E-value=0.00061 Score=56.78 Aligned_cols=96 Identities=20% Similarity=0.221 Sum_probs=55.4
Q ss_pred hHHHHHHHHHhcCCCCCCeEEEEcCCcC-HHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC
Q 019282 166 GRDVFEFLAEASHITPNSHVLEIGCGTL-RVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM 244 (343)
Q Consensus 166 ~~~~~~~l~~~~~l~~~~rVLDIGCGtG-~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 244 (343)
-+.+.++|.+. ..++.+|||||||.| +.+..|++..+ ..+.++|+++.... ++.+
T Consensus 22 ~e~LaeYI~~~--~~~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~------------------~v~d--- 77 (153)
T 2k4m_A 22 WNDLAVYIIRC--SGPGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGG------------------IVRD--- 77 (153)
T ss_dssp HHHHHHHHHHH--SCSSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTT------------------EECC---
T ss_pred HHHHHHHHHhc--CCCCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccc------------------eEEc---
Confidence 45567777654 345679999999999 79999986421 23445555441111 3333
Q ss_pred CcCCCCCC--CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 245 DFTKFGSG--VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 245 dl~~~~~~--~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
|+-+...+ +.||+|++..-... .+..+.++.+... .-++|.
T Consensus 78 DiF~P~~~~Y~~~DLIYsirPP~E-----l~~~i~~lA~~v~---adliI~ 120 (153)
T 2k4m_A 78 DITSPRMEIYRGAALIYSIRPPAE-----IHSSLMRVADAVG---ARLIIK 120 (153)
T ss_dssp CSSSCCHHHHTTEEEEEEESCCTT-----THHHHHHHHHHHT---CEEEEE
T ss_pred cCCCCcccccCCcCEEEEcCCCHH-----HHHHHHHHHHHcC---CCEEEE
Confidence 33222111 48999998764433 3335556666554 445554
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.02 E-value=0.00084 Score=64.51 Aligned_cols=132 Identities=15% Similarity=0.199 Sum_probs=77.2
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc--CCCC----CCCcEEEecccCCcCC-C-CC
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS--QGLL----HKRPIIVRGEDMDFTK-F-GS 251 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~--~~~~----~~~~~~~~~~~~dl~~-~-~~ 251 (343)
.+..+||=||.|.|..+..++++. ...+++++||+.-...+... +.. .+.. ..++.++.+++..+.. . ..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~-~~~V~~VEIDp~VVe~ar~y-fp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKY-MRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHH-CCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcC-CceeEEEccCHHHHHHHHhh-chhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 345799999999999999999854 46788999988665555321 111 1111 1234455443333321 0 12
Q ss_pred CCceeEEEEccccc-------cCC-chHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcC
Q 019282 252 GVVYDLIYASAVFL-------HMP-DKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLG 315 (343)
Q Consensus 252 ~~~fDlIvs~~v~~-------hl~-~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aG 315 (343)
.+.||+|+.-..-. ... ......+++.+++.|+| ||+++......+... ....+.+.+++..
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p-~GVlv~Q~~s~~~~~-~~~~i~~tl~~vF 351 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ-DGKYFTQGNCVNLTE-ALSLYEEQLGRLY 351 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE-EEEEEEEEEETTCHH-HHHHHHHHHTTSS
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCC-CCEEEEecCCCcchh-HHHHHHHHHHHhC
Confidence 45799999753211 111 11234578999999999 999987543222210 1344556666653
No 296
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.01 E-value=0.00067 Score=62.62 Aligned_cols=83 Identities=12% Similarity=0.036 Sum_probs=53.2
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF 249 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~ 249 (343)
.+.+.+.+.++++..+||.+||.|+.+..+++. ...++++|.|+ ...+.+++ ... .++.++.++-.++..+
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp--~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~ 81 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDP--EAVARAKG-LHL----PGLTVVQGNFRHLKRH 81 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCH--HHHHHHHH-TCC----TTEEEEESCGGGHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCH--HHHHHHHh-hcc----CCEEEEECCcchHHHH
Confidence 344444567888999999999999999999985 33445555555 55554554 322 3677777644443221
Q ss_pred C---CCCceeEEEEc
Q 019282 250 G---SGVVYDLIYAS 261 (343)
Q Consensus 250 ~---~~~~fDlIvs~ 261 (343)
. ..+++|.|++.
T Consensus 82 L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 82 LAALGVERVDGILAD 96 (285)
T ss_dssp HHHTTCSCEEEEEEE
T ss_pred HHHcCCCCcCEEEeC
Confidence 1 12579999974
No 297
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.84 E-value=0.0025 Score=60.88 Aligned_cols=113 Identities=12% Similarity=0.086 Sum_probs=68.0
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCC----CCCCcEEEecccCCcCCCCC
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGL----LHKRPIIVRGEDMDFTKFGS 251 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~----~~~~~~~~~~~~~dl~~~~~ 251 (343)
++..+|.+|||+.+|.|.=+.+++.......+++.|++....... +++.. .+. ...++.....+...+... .
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l--~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~-~ 220 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARL--QKILHSYVPEEIRDGNQVRVTSWDGRKWGEL-E 220 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHH--HHHHHHHSCTTTTTSSSEEEECCCGGGHHHH-S
T ss_pred hCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHH--HHHHHHhhhhhhccCCceEEEeCchhhcchh-c
Confidence 688999999999999999999999865544566666665543322 22111 111 112344443332222222 3
Q ss_pred CCceeEEEEc----c----ccccCCc-------h-------HHHHHHHHHHhccCCCCcEEEEE
Q 019282 252 GVVYDLIYAS----A----VFLHMPD-------K-------LVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 252 ~~~fDlIvs~----~----v~~hl~~-------~-------~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+.||.|+.- . ++..-++ . ....+|....+.||| ||+|+.+
T Consensus 221 ~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkp-GG~LVYs 283 (359)
T 4fzv_A 221 GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKP-GGHVVYS 283 (359)
T ss_dssp TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEE-EEEEEEE
T ss_pred cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEEEE
Confidence 5689999963 2 1111111 0 123578889999999 9999765
No 298
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.67 E-value=0.0081 Score=55.60 Aligned_cols=128 Identities=13% Similarity=0.095 Sum_probs=71.6
Q ss_pred HHHHHHHh-----cCCCCCCeEEEEcC------CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcE
Q 019282 169 VFEFLAEA-----SHITPNSHVLEIGC------GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPI 237 (343)
Q Consensus 169 ~~~~l~~~-----~~l~~~~rVLDIGC------GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~ 237 (343)
++..|++. +.++.+.+|||+|+ -+|.. .+.+..+ .+..++++|..+ .. .....
T Consensus 92 kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p-~g~~VVavDL~~--------~~-----sda~~ 155 (344)
T 3r24_A 92 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLP-TGTLLVDSDLND--------FV-----SDADS 155 (344)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSC-TTCEEEEEESSC--------CB-----CSSSE
T ss_pred HHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCC-CCcEEEEeeCcc--------cc-----cCCCe
Confidence 44444444 45678899999996 67763 3344333 334677777622 11 11225
Q ss_pred EEecccCCcCCCCCCCceeEEEEccccccCCc---------hHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHH
Q 019282 238 IVRGEDMDFTKFGSGVVYDLIYASAVFLHMPD---------KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECT 308 (343)
Q Consensus 238 ~~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~---------~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~ 308 (343)
+++++ +......++||+|+|-...--.+. .-....++-+.+.|+| ||.|++-.. .... .+.+.
T Consensus 156 ~IqGD---~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~Lkp-GGsFvVKVF---QGsg-~~~L~ 227 (344)
T 3r24_A 156 TLIGD---CATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLAL-GGSIAVKIT---EHSW-NADLY 227 (344)
T ss_dssp EEESC---GGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEE-EEEEEEEEC---SSSC-CHHHH
T ss_pred EEEcc---ccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcC-CCEEEEEEe---cCCC-HHHHH
Confidence 57764 332334578999999543321111 1123366778889999 999988631 1111 23344
Q ss_pred HHHHhcCCcEEEee
Q 019282 309 KRLTSLGLEYIGKK 322 (343)
Q Consensus 309 ~~L~~aGf~~v~~~ 322 (343)
+ +.+ -|+.+...
T Consensus 228 ~-lrk-~F~~VK~f 239 (344)
T 3r24_A 228 K-LMG-HFSWWTAF 239 (344)
T ss_dssp H-HHT-TEEEEEEE
T ss_pred H-HHh-hCCeEEEE
Confidence 4 333 77766644
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.32 E-value=0.0047 Score=57.14 Aligned_cols=52 Identities=17% Similarity=-0.019 Sum_probs=35.3
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHH
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAA 221 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a 221 (343)
..+++.+.+... .++..|||++||+|.++..++.. . ..+.++++++.....+
T Consensus 222 ~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~-g-~~~~g~e~~~~~~~~a 273 (297)
T 2zig_A 222 LELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW-G-RRALGVELVPRYAQLA 273 (297)
T ss_dssp HHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT-T-CEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-C-CeEEEEeCCHHHHHHH
Confidence 356666665544 67889999999999999988762 2 3455555555444444
No 300
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.03 E-value=0.0026 Score=74.67 Aligned_cols=130 Identities=19% Similarity=0.241 Sum_probs=57.5
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCC-----CceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC--CCC
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNP-----ENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF--GSG 252 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~-----~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~--~~~ 252 (343)
.+..+|||||.|+|..+..+.+.+.. ..++.+|++..-...+ ++.... + .+.. ...+..+. ...
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a--~~~f~~-~---di~~---~~~d~~~~~~~~~ 1309 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAA--QAKLEQ-L---HVTQ---GQWDPANPAPGSL 1309 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTT--TTTHHH-H---TEEE---ECCCSSCCCC---
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHH--HHHhhh-c---cccc---ccccccccccCCC
Confidence 46789999999999887777666532 3577777775322111 111000 0 0000 00111110 024
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccc---------c--------ccCCCHHHHHHHHHhcC
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIK---------F--------CSRLGGEECTKRLTSLG 315 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~---------~--------~~~~~~~~l~~~L~~aG 315 (343)
..||+|++..++|..++... .|.+++++||| ||++++..... + ......++|.+.|.++|
T Consensus 1310 ~~ydlvia~~vl~~t~~~~~--~l~~~~~lL~p-~G~l~~~e~~~~~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~g 1386 (2512)
T 2vz8_A 1310 GKADLLVCNCALATLGDPAV--AVGNMAATLKE-GGFLLLHTLLAGHPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGAS 1386 (2512)
T ss_dssp --CCEEEEECC-----------------------CCEEEEEEC--------------------------CTTTTSSTTTT
T ss_pred CceeEEEEcccccccccHHH--HHHHHHHhcCC-CcEEEEEeccccccccccccccccccccCCcccCHHHHHHHHHhCC
Confidence 57999999999976665544 89999999999 99987753110 0 01112455666778889
Q ss_pred CcEEEe
Q 019282 316 LEYIGK 321 (343)
Q Consensus 316 f~~v~~ 321 (343)
|..+..
T Consensus 1387 f~~~~~ 1392 (2512)
T 2vz8_A 1387 LHLVAL 1392 (2512)
T ss_dssp EEEEEE
T ss_pred Cceeee
Confidence 987654
No 301
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=94.98 E-value=0.03 Score=52.83 Aligned_cols=85 Identities=14% Similarity=0.126 Sum_probs=56.0
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 170 FEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 170 ~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
++.+.+.+.++++..++|..||.|..+..+++.++ ...++++|.|+..+..+ +++ ...++.++.++-.++..
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A--~rL-----~~~Rv~lv~~nF~~l~~ 118 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVA--KTI-----DDPRFSIIHGPFSALGE 118 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHH--TTC-----CCTTEEEEESCGGGHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHH--Hhh-----cCCcEEEEeCCHHHHHH
Confidence 34455556788999999999999999999998764 44566777766554443 322 23467777764334321
Q ss_pred C----CCCCceeEEEEc
Q 019282 249 F----GSGVVYDLIYAS 261 (343)
Q Consensus 249 ~----~~~~~fDlIvs~ 261 (343)
+ ...+++|.|++.
T Consensus 119 ~L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 119 YVAERDLIGKIDGILLD 135 (347)
T ss_dssp HHHHTTCTTCEEEEEEE
T ss_pred HHHhcCCCCcccEEEEC
Confidence 1 112369999875
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.85 E-value=0.044 Score=52.10 Aligned_cols=82 Identities=17% Similarity=0.198 Sum_probs=54.5
Q ss_pred cCCCccchHHHHHHHHHhcCCCC------CCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCC
Q 019282 159 YGEPWAGGRDVFEFLAEASHITP------NSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLL 232 (343)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~~~l~~------~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~ 232 (343)
||-.+=....+.+.|.+.+++.+ +..|||||.|.|.++..|++......++++++|.... ...++.. .
T Consensus 30 lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~--~~L~~~~----~ 103 (353)
T 1i4w_A 30 YGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLY--KFLNAKF----E 103 (353)
T ss_dssp GGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHH--HHHHHHT----T
T ss_pred CCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHH--HHHHHhc----c
Confidence 44444345667777877777764 5899999999999999999865445688888887533 2222222 1
Q ss_pred CCCcEEEecccCCc
Q 019282 233 HKRPIIVRGEDMDF 246 (343)
Q Consensus 233 ~~~~~~~~~~~~dl 246 (343)
..+..++.++..++
T Consensus 104 ~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 104 GSPLQILKRDPYDW 117 (353)
T ss_dssp TSSCEEECSCTTCH
T ss_pred CCCEEEEECCccch
Confidence 23667777755443
No 303
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.24 E-value=0.1 Score=53.44 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=42.5
Q ss_pred CCceeEEEEcccccc-CCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 252 GVVYDLIYASAVFLH-MPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 252 ~~~fDlIvs~~v~~h-l~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
...||+|+.-..-.. -|+-....+|..++++++| ||.+.... ....+++.|.++||.+....
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~-g~~~~t~~--------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARP-GGTLATFT--------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEE-EEEEEESC--------CCHHHHHHHHHHTCEEEEEE
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCC-CCEEEecc--------CcHHHHHHHHhCCeEEEecc
Confidence 357999998543222 2333345689999999999 88764321 13568889999999876543
No 304
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.80 E-value=0.082 Score=54.45 Aligned_cols=132 Identities=14% Similarity=0.065 Sum_probs=73.8
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHc----------CCCceEEEEcCh---hHHHHHHHH-----------hcccCCCC----
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYL----------NPENFHCLERDE---LSLMAAFRY-----------ELPSQGLL---- 232 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~----------~~~~~~vvdid~---s~~~~a~a~-----------~~~~~~~~---- 232 (343)
+.-+|||+|.|+|...+.+.+.+ ....++.+.++. +......+- ++.. ..+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~-~~~~~~~ 136 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRA-QWPLPLA 136 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHH-TCCCCCS
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHH-hCcccCC
Confidence 44689999999999988877654 112356666554 222222111 1111 011
Q ss_pred --------CC--CcEEEecccCCc-CCCC--CCCceeEEEEccccccC-CchHHHHHHHHHHhccCCCCcEEEEEecccc
Q 019282 233 --------HK--RPIIVRGEDMDF-TKFG--SGVVYDLIYASAVFLHM-PDKLVWVGLERLASKLRPYDGRIFVSHNIKF 298 (343)
Q Consensus 233 --------~~--~~~~~~~~~~dl-~~~~--~~~~fDlIvs~~v~~hl-~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~ 298 (343)
+. ...+..++..+. +.+. ....+|.++.-..-... ++-....+|..+.++++| ||.+.-..
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~-g~~~~t~~---- 211 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRP-GGTFSTFT---- 211 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEE-EEEEEESC----
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCC-CCEEEecc----
Confidence 11 122333332222 2221 14679999885432222 332334589999999999 88764321
Q ss_pred ccCCCHHHHHHHHHhcCCcEEEee
Q 019282 299 CSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 299 ~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
....+++.|.++||.+....
T Consensus 212 ----~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 ----AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ----CCHHHHHHHHHTTCEEEEEE
T ss_pred ----CcHHHHHHHHhCCeEEEecc
Confidence 13578889999999877644
No 305
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=93.74 E-value=0.28 Score=46.16 Aligned_cols=110 Identities=11% Similarity=0.131 Sum_probs=72.0
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCC-------------------CCCCcEEEe
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGL-------------------LHKRPIIVR 240 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~-------------------~~~~~~~~~ 240 (343)
.+...|+.+|||.......+.... .+++++++|.......+.+.+.+.+. ...+...+.
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~--~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~ 173 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF--PHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAA 173 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC--TTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC--CCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEe
Confidence 355789999999999988887643 36789999985555443333222210 012444554
Q ss_pred cccCCc-------CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 241 GEDMDF-------TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 241 ~~~~dl-------~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+-.+. ......+...++++-.++.+++......+|+.+.+.. | +|.+++.
T Consensus 174 ~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~-~~~~v~~ 231 (334)
T 1rjd_A 174 CDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-S-HGLWISY 231 (334)
T ss_dssp CCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-S-SEEEEEE
T ss_pred cCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-C-CcEEEEE
Confidence 422221 1111224678999999999999999989999999987 6 7877543
No 306
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.67 E-value=0.31 Score=45.87 Aligned_cols=102 Identities=16% Similarity=0.121 Sum_probs=61.3
Q ss_pred HHHhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc----C
Q 019282 173 LAEASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF----T 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl----~ 247 (343)
+.+...++++.+||-+|+|. |..+..+++......+.+++.+. ...+.++++ |. . ..+.....++ .
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~--~~~~~a~~l---Ga---~-~vi~~~~~~~~~~~~ 252 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVE--SRLELAKQL---GA---T-HVINSKTQDPVAAIK 252 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCH--HHHHHHHHH---TC---S-EEEETTTSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCH--HHHHHHHHc---CC---C-EEecCCccCHHHHHH
Confidence 43456788999999999986 88888888876543455555554 334444432 21 1 1122111121 1
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+. ..+.+|+|+-.. +.. ..++...+.|+| ||++++.
T Consensus 253 ~~-~~gg~D~vid~~-----g~~---~~~~~~~~~l~~-~G~iv~~ 288 (371)
T 1f8f_A 253 EI-TDGGVNFALEST-----GSP---EILKQGVDALGI-LGKIAVV 288 (371)
T ss_dssp HH-TTSCEEEEEECS-----CCH---HHHHHHHHTEEE-EEEEEEC
T ss_pred Hh-cCCCCcEEEECC-----CCH---HHHHHHHHHHhc-CCEEEEe
Confidence 11 123799997643 222 267889999999 9999875
No 307
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.18 E-value=0.13 Score=46.31 Aligned_cols=52 Identities=25% Similarity=0.250 Sum_probs=35.1
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHH
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAA 221 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a 221 (343)
..+++.+.+.. ..++..|||..||+|.++....+. ...+.++++++.....+
T Consensus 199 ~~l~~~~i~~~-~~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~ 250 (260)
T 1g60_A 199 RDLIERIIRAS-SNPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQA 250 (260)
T ss_dssp HHHHHHHHHHH-CCTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHH
Confidence 34555555543 367889999999999999887762 24555666666554444
No 308
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.49 E-value=0.25 Score=45.33 Aligned_cols=85 Identities=13% Similarity=0.131 Sum_probs=53.6
Q ss_pred CcEEEecccCCcCCCCCCCceeEEEEccccccCCc------------------hHHHHHHHHHHhccCCCCcEEEEEecc
Q 019282 235 RPIIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPD------------------KLVWVGLERLASKLRPYDGRIFVSHNI 296 (343)
Q Consensus 235 ~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~------------------~~~~~~L~~l~r~LkP~GG~lvi~~~~ 296 (343)
...++.++..+......+++||+|+++--+....+ .....+++++.++||| ||.+++..+.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~-~G~l~i~~~d 99 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVP-GGRLVIVVGD 99 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEECC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCC-CcEEEEEECC
Confidence 44567775555322224679999999866532211 0123467899999999 9999988653
Q ss_pred ccccC--------CC-HHHHHHHHHhcCCcEEE
Q 019282 297 KFCSR--------LG-GEECTKRLTSLGLEYIG 320 (343)
Q Consensus 297 ~~~~~--------~~-~~~l~~~L~~aGf~~v~ 320 (343)
..... +. ...+...++++||....
T Consensus 100 ~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 100 VAVARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EEEECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred CccccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 22110 11 35677889999998765
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.90 E-value=0.56 Score=44.65 Aligned_cols=105 Identities=16% Similarity=0.110 Sum_probs=61.4
Q ss_pred HhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc-C----C
Q 019282 175 EASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF-T----K 248 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl-~----~ 248 (343)
+...++++.+||-+|||. |.++..+++......+.+++.+. ...+.++++ |. ..+.....++ . .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~a~~l---Ga-----~~i~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNP--ERLKLLSDA---GF-----ETIDLRNSAPLRDQIDQ 248 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCH--HHHHHHHTT---TC-----EEEETTSSSCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCH--HHHHHHHHc---CC-----cEEcCCCcchHHHHHHH
Confidence 346789999999999986 88888888876543455555444 444444432 21 1222211221 1 0
Q ss_pred CCCCCceeEEEEcccccc---------CCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYASAVFLH---------MPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~h---------l~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
......+|+|+-.-.-.. +... ..++...++|+| ||++++.
T Consensus 249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~---~~~~~~~~~l~~-gG~iv~~ 298 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGFEAHGLGDEANTETPN---GALNSLFDVVRA-GGAIGIP 298 (398)
T ss_dssp HHSSSCEEEEEECSCTTCBCSGGGTTSBCTT---HHHHHHHHHEEE-EEEEECC
T ss_pred HhCCCCCCEEEECCCCccccccccccccccH---HHHHHHHHHHhc-CCEEEEe
Confidence 111236999986533221 1111 157889999999 9998754
No 310
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.32 E-value=0.26 Score=45.93 Aligned_cols=85 Identities=13% Similarity=0.144 Sum_probs=52.4
Q ss_pred CcEEEecccCCcCCCCCCCceeEEEEccccccCCc------------hHHHHHHHHHHhccCCCCcEEEEEecccccc--
Q 019282 235 RPIIVRGEDMDFTKFGSGVVYDLIYASAVFLHMPD------------KLVWVGLERLASKLRPYDGRIFVSHNIKFCS-- 300 (343)
Q Consensus 235 ~~~~~~~~~~dl~~~~~~~~fDlIvs~~v~~hl~~------------~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~-- 300 (343)
...++.++..+......+++||+|++.--+....+ ......|++++++|+| ||.+++.....+..
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~-~G~i~i~~~d~~~~g~ 92 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKP-DGSFVVDFGGAYMKGV 92 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEECCCEETTE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcC-CcEEEEEECCEecCCC
Confidence 34556665444322223678999999755532210 1234578999999999 99999986533211
Q ss_pred ----CCCHHHHHHHHHhcCCcEEE
Q 019282 301 ----RLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 301 ----~~~~~~l~~~L~~aGf~~v~ 320 (343)
.+....+.+.++..||..+.
T Consensus 93 ~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 93 PARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp EEECCHHHHHHHHHHHTTCCEEEE
T ss_pred cccccchHHHHHHHHHhCCCEEEE
Confidence 11234555677899998764
No 311
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.17 E-value=0.92 Score=43.05 Aligned_cols=105 Identities=16% Similarity=0.083 Sum_probs=60.7
Q ss_pred hcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC-c----CCC
Q 019282 176 ASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD-F----TKF 249 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d-l----~~~ 249 (343)
..+++++.+||-+|+|. |.++..+++......+.+++.+. ...+.++++ |. . .+.....+ + .+.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~--~~~~~a~~l---Ga---~--~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNP--ARLAHAKAQ---GF---E--IADLSLDTPLHEQIAAL 249 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCH--HHHHHHHHT---TC---E--EEETTSSSCHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCH--HHHHHHHHc---CC---c--EEccCCcchHHHHHHHH
Confidence 46788999999999875 77888888875543444555444 444444432 22 1 12211111 1 101
Q ss_pred CCCCceeEEEEccccc---------cCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 250 GSGVVYDLIYASAVFL---------HMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~---------hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.....+|+|+-.-.-. |.+++.. .++...++|++ ||++++.
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~-~G~iv~~ 299 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHEAPAT--VLNSLMQVTRV-AGKIGIP 299 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTH--HHHHHHHHEEE-EEEEEEC
T ss_pred hCCCCCCEEEECCCCcccccccccccccchHH--HHHHHHHHHhc-CCEEEEe
Confidence 1123699998643321 1222222 68889999999 9998764
No 312
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.05 E-value=0.51 Score=43.75 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=59.5
Q ss_pred HhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--C
Q 019282 175 EASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG--S 251 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~--~ 251 (343)
+...++++.+||-+|+|. |..+..+++... ..++.++.+....+.++++. . . ..+.....++.+.. .
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~lG---a---~-~~i~~~~~~~~~~~~~~ 229 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG---LRVAAVDIDDAKLNLARRLG---A---E-VAVNARDTDPAAWLQKE 229 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHTT---C---S-EEEETTTSCHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHcC---C---C-EEEeCCCcCHHHHHHHh
Confidence 345788999999999975 888888888654 34555544444455444432 1 1 12222112211000 1
Q ss_pred CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 252 GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+.+|+|+-... .. ..++.+.++|+| ||++++.
T Consensus 230 ~g~~d~vid~~g-----~~---~~~~~~~~~l~~-~G~iv~~ 262 (340)
T 3s2e_A 230 IGGAHGVLVTAV-----SP---KAFSQAIGMVRR-GGTIALN 262 (340)
T ss_dssp HSSEEEEEESSC-----CH---HHHHHHHHHEEE-EEEEEEC
T ss_pred CCCCCEEEEeCC-----CH---HHHHHHHHHhcc-CCEEEEe
Confidence 236888876422 22 268889999999 9999875
No 313
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.34 E-value=0.81 Score=42.57 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=56.8
Q ss_pred hcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCc
Q 019282 176 ASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVV 254 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~ 254 (343)
...++++.+||-+|+|. |..+..+++... ..++.++.+....+.++++ |. ...+ .+... + ...
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~~~~~~~~~~l---Ga---~~v~--~~~~~---~--~~~ 234 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMG---AEVSVFARNEHKKQDALSM---GV---KHFY--TDPKQ---C--KEE 234 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTT---CEEEEECSSSTTHHHHHHT---TC---SEEE--SSGGG---C--CSC
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHhc---CC---Ceec--CCHHH---H--hcC
Confidence 35888999999999875 777777777643 3455555444444444442 21 1112 11111 2 127
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+|+|+-... ... .++...++|+| ||++++.
T Consensus 235 ~D~vid~~g-----~~~---~~~~~~~~l~~-~G~iv~~ 264 (348)
T 3two_A 235 LDFIISTIP-----THY---DLKDYLKLLTY-NGDLALV 264 (348)
T ss_dssp EEEEEECCC-----SCC---CHHHHHTTEEE-EEEEEEC
T ss_pred CCEEEECCC-----cHH---HHHHHHHHHhc-CCEEEEE
Confidence 999986422 221 46778999999 9999875
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=90.07 E-value=0.86 Score=42.57 Aligned_cols=100 Identities=11% Similarity=0.118 Sum_probs=58.3
Q ss_pred HhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecc---cCCc----
Q 019282 175 EASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGE---DMDF---- 246 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~---~~dl---- 246 (343)
+...++++.+||-+|+|. |.++..+++..+...+.+++.+. ...+.++++ |. . ..+... ..++
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~a~~l---Ga---~-~vi~~~~~~~~~~~~~i 235 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSA--TRLSKAKEI---GA---D-LVLQISKESPQEIARKV 235 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCH--HHHHHHHHT---TC---S-EEEECSSCCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH--HHHHHHHHh---CC---C-EEEcCcccccchHHHHH
Confidence 345788999999999985 77777888765433445555444 444444432 22 1 112111 0111
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+.. .+.+|+|+-. .+.. ..++...++|+| ||++++.
T Consensus 236 ~~~~-~~g~D~vid~-----~g~~---~~~~~~~~~l~~-~G~iv~~ 272 (356)
T 1pl8_A 236 EGQL-GCKPEVTIEC-----TGAE---ASIQAGIYATRS-GGTLVLV 272 (356)
T ss_dssp HHHH-TSCCSEEEEC-----SCCH---HHHHHHHHHSCT-TCEEEEC
T ss_pred HHHh-CCCCCEEEEC-----CCCh---HHHHHHHHHhcC-CCEEEEE
Confidence 1010 1468999764 2222 157888999999 9999864
No 315
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=90.03 E-value=2 Score=38.71 Aligned_cols=133 Identities=15% Similarity=0.102 Sum_probs=76.1
Q ss_pred CCeEEEEcCCcCHHHHHHHHH---c----CCCceEEEE-----cChhH----------------------HHHHH-HHh-
Q 019282 182 NSHVLEIGCGTLRVGVHFIRY---L----NPENFHCLE-----RDELS----------------------LMAAF-RYE- 225 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~---~----~~~~~~vvd-----id~s~----------------------~~~a~-a~~- 225 (343)
...|+|+||-.|..+..++.. + ....+++.| .+... +.... ..+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 348999999999999887652 1 235666666 21100 01000 011
Q ss_pred cccCCCCCCCcEEEecccCCc-CCC---CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccC
Q 019282 226 LPSQGLLHKRPIIVRGEDMDF-TKF---GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSR 301 (343)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~dl-~~~---~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~ 301 (343)
....+....++.++.|...+. +.+ .+..+||+|+.-.-. -.....+++.+...|+| ||++++-. ..+ ..
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----Y~~t~~~le~~~p~l~~-GGvIv~DD-~~~-~~ 222 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----YEPTKAVLEAIRPYLTK-GSIVAFDE-LDN-PK 222 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----HHHHHHHHHHHGGGEEE-EEEEEESS-TTC-TT
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----cchHHHHHHHHHHHhCC-CcEEEEcC-CCC-CC
Confidence 111233335778888744332 111 124579999886521 12234489999999999 88887643 211 11
Q ss_pred C-C-HHHHHHHHHhcCCcEEEe
Q 019282 302 L-G-GEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 302 ~-~-~~~l~~~L~~aGf~~v~~ 321 (343)
+ + ...+.+.+.+.|.+....
T Consensus 223 w~G~~~A~~ef~~~~~~~i~~~ 244 (257)
T 3tos_A 223 WPGENIAMRKVLGLDHAPLRLL 244 (257)
T ss_dssp CTHHHHHHHHHTCTTSSCCEEC
T ss_pred ChHHHHHHHHHHhhCCCeEEEc
Confidence 2 2 666777778888765543
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.77 E-value=0.53 Score=44.42 Aligned_cols=100 Identities=13% Similarity=0.101 Sum_probs=59.9
Q ss_pred HhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc----CC-
Q 019282 175 EASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF----TK- 248 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl----~~- 248 (343)
+...++++.+||=+|+|. |.++..+++..+.. .++.++.+....+.++++. . ...+.....++ .+
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~a~~lG---a----~~vi~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGAT--TVILSTRQATKRRLAEEVG---A----TATVDPSAGDVVEAIAGP 246 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHT---C----SEEECTTSSCHHHHHHST
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHcC---C----CEEECCCCcCHHHHHHhh
Confidence 446789999999999875 77777777765433 3444555444455444432 1 11121111121 11
Q ss_pred --CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 --FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 --~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
. ..+.+|+|+-. .+.. ..++.+.++|+| ||++++.
T Consensus 247 ~~~-~~gg~Dvvid~-----~G~~---~~~~~~~~~l~~-~G~vv~~ 283 (370)
T 4ej6_A 247 VGL-VPGGVDVVIEC-----AGVA---ETVKQSTRLAKA-GGTVVIL 283 (370)
T ss_dssp TSS-STTCEEEEEEC-----SCCH---HHHHHHHHHEEE-EEEEEEC
T ss_pred hhc-cCCCCCEEEEC-----CCCH---HHHHHHHHHhcc-CCEEEEE
Confidence 1 13479999864 2322 268889999999 9999875
No 317
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=89.52 E-value=0.68 Score=39.16 Aligned_cols=99 Identities=18% Similarity=0.300 Sum_probs=54.8
Q ss_pred HhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----C
Q 019282 175 EASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----K 248 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~ 248 (343)
+..+++++.+||.+|+ |.|..+..++...+ ..+.+++.+. ...+.+++. +. . ..+.....+.. +
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~--~~~~~~~~~---g~---~-~~~d~~~~~~~~~~~~ 101 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSD--AKREMLSRL---GV---E-YVGDSRSVDFADEILE 101 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSH--HHHHHHHTT---CC---S-EEEETTCSTHHHHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCH--HHHHHHHHc---CC---C-EEeeCCcHHHHHHHHH
Confidence 3457889999999994 45666666655443 3444555443 333333321 21 1 12221111110 0
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
....+.+|+|+.+.. . ..++.+.+.|+| ||+++..
T Consensus 102 ~~~~~~~D~vi~~~g-----~----~~~~~~~~~l~~-~G~~v~~ 136 (198)
T 1pqw_A 102 LTDGYGVDVVLNSLA-----G----EAIQRGVQILAP-GGRFIEL 136 (198)
T ss_dssp HTTTCCEEEEEECCC-----T----HHHHHHHHTEEE-EEEEEEC
T ss_pred HhCCCCCeEEEECCc-----h----HHHHHHHHHhcc-CCEEEEE
Confidence 111236999986532 2 167889999999 9998775
No 318
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=89.46 E-value=2.8 Score=38.69 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=65.7
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhccc-CCC-CCCCcEEEecccCCcCC-CC--------C
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPS-QGL-LHKRPIIVRGEDMDFTK-FG--------S 251 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~-~~~-~~~~~~~~~~~~~dl~~-~~--------~ 251 (343)
..|++||||-=..+..+. ...+.+++++|. +...+.+++... .+. ...+...+.. |+.+ +. .
T Consensus 104 ~QvV~LGaGlDTra~Rl~---~~~~~~v~evD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~---Dl~d~~~~~l~~~g~d 176 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLD---WPTGTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPI---DLRQDWPPALRSAGFD 176 (310)
T ss_dssp CEEEEETCTTCCHHHHSC---CCTTCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEEC---CTTSCHHHHHHHTTCC
T ss_pred CeEEEeCCCCCchhhhcc---CCCCcEEEEcCC-HHHHHHHHHHHHhcCCCCCCCeEEEec---chHhhHHHHHHhccCC
Confidence 469999999755543332 123467888885 444444444332 221 2223444544 3322 10 1
Q ss_pred CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 252 GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
.+.-=++++-.+++++++.....+++.+.+.+.| |+.+++.+
T Consensus 177 ~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~-gs~l~~d~ 218 (310)
T 2uyo_A 177 PSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAV-GSRIAVET 218 (310)
T ss_dssp TTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCT-TCEEEEEC
T ss_pred CCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCC-CeEEEEEe
Confidence 1234578888999999998888899999999999 99988874
No 319
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.17 E-value=0.91 Score=41.90 Aligned_cols=103 Identities=14% Similarity=0.090 Sum_probs=59.4
Q ss_pred HHHHHhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHH-HhcccCCCCCCCcEEEecccCCcC
Q 019282 171 EFLAEASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFR-YELPSQGLLHKRPIIVRGEDMDFT 247 (343)
Q Consensus 171 ~~l~~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a-~~~~~~~~~~~~~~~~~~~~~dl~ 247 (343)
..+.+...++++.+||-+|+ |.|..+..+++..+ ..++.++.+....+.+ ++. +. ...+.....++.
T Consensus 139 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~~~~~~~~~~~~~---g~----~~~~~~~~~~~~ 208 (336)
T 4b7c_A 139 FALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKG---CRVVGIAGGAEKCRFLVEEL---GF----DGAIDYKNEDLA 208 (336)
T ss_dssp HHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHTT---CC----SEEEETTTSCHH
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHc---CC----CEEEECCCHHHH
Confidence 33445578899999999998 56777777776543 3444444444444433 322 11 112221112221
Q ss_pred CCC---CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 KFG---SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 ~~~---~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+.. ..+.+|+|+.+.. .. .+..+.+.|+| ||++++.
T Consensus 209 ~~~~~~~~~~~d~vi~~~g-----~~----~~~~~~~~l~~-~G~iv~~ 247 (336)
T 4b7c_A 209 AGLKRECPKGIDVFFDNVG-----GE----ILDTVLTRIAF-KARIVLC 247 (336)
T ss_dssp HHHHHHCTTCEEEEEESSC-----HH----HHHHHHTTEEE-EEEEEEC
T ss_pred HHHHHhcCCCceEEEECCC-----cc----hHHHHHHHHhh-CCEEEEE
Confidence 000 1346999976432 21 67889999999 9999875
No 320
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=88.79 E-value=0.24 Score=46.36 Aligned_cols=101 Identities=17% Similarity=0.113 Sum_probs=59.5
Q ss_pred HhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----CC
Q 019282 175 EASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----KF 249 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~~ 249 (343)
+...++++.+||=+|+|. |.++..+++......+.++ +.+....+.++++. . ...+.....++. +.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~--~~~~~~~~~~~~lG---a----~~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAV--GSRKHCCDIALEYG---A----TDIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEE--CCCHHHHHHHHHHT---C----CEEECGGGSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE--CCCHHHHHHHHHhC---C----ceEEcCCCcCHHHHHHHH
Confidence 457889999999999875 7777777776543344454 44444444444432 1 112221112221 11
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.....+|+|+-. .+... .++...+.|+| ||++++.
T Consensus 231 t~g~g~D~v~d~-----~g~~~---~~~~~~~~l~~-~G~~v~~ 265 (352)
T 3fpc_A 231 TDGKGVDKVVIA-----GGDVH---TFAQAVKMIKP-GSDIGNV 265 (352)
T ss_dssp TTTCCEEEEEEC-----SSCTT---HHHHHHHHEEE-EEEEEEC
T ss_pred cCCCCCCEEEEC-----CCChH---HHHHHHHHHhc-CCEEEEe
Confidence 123469999863 22221 57889999999 9999864
No 321
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=88.35 E-value=1.5 Score=40.41 Aligned_cols=100 Identities=15% Similarity=0.124 Sum_probs=56.0
Q ss_pred HHHhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc-CCcC--
Q 019282 173 LAEASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED-MDFT-- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~-~dl~-- 247 (343)
+.+..++.++.+||-.|+ |.|..+..++...+ ..+.+++.+. ...+.+++. +. . ..+.... .++.
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~--~~~~~~~~~---g~---~-~~~d~~~~~~~~~~ 206 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSD--EKIAYLKQI---GF---D-AAFNYKTVNSLEEA 206 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSH--HHHHHHHHT---TC---S-EEEETTSCSCHHHH
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCH--HHHHHHHhc---CC---c-EEEecCCHHHHHHH
Confidence 334467889999999998 56666666665433 2444444444 333333332 11 1 1121111 1111
Q ss_pred --CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 --KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 --~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.. ..+.+|+|+.+.. .. .+....++|+| ||++++.
T Consensus 207 ~~~~-~~~~~d~vi~~~g-----~~----~~~~~~~~l~~-~G~~v~~ 243 (333)
T 1v3u_A 207 LKKA-SPDGYDCYFDNVG-----GE----FLNTVLSQMKD-FGKIAIC 243 (333)
T ss_dssp HHHH-CTTCEEEEEESSC-----HH----HHHHHHTTEEE-EEEEEEC
T ss_pred HHHH-hCCCCeEEEECCC-----hH----HHHHHHHHHhc-CCEEEEE
Confidence 01 1247999987543 21 47888999999 9998764
No 322
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=88.31 E-value=2.2 Score=39.76 Aligned_cols=102 Identities=14% Similarity=0.118 Sum_probs=60.6
Q ss_pred HhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecc---cCCc----
Q 019282 175 EASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGE---DMDF---- 246 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~---~~dl---- 246 (343)
+...+.++.+||=+|+|. |.++..+++..+...+.+++.+.... +.++++ .. .+.....+ ..++
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~--~~a~~l-~~-----~~~~~~~~~~~~~~~~~~v 244 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL--KFAKEI-CP-----EVVTHKVERLSAEESAKKI 244 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHH--HHHHHH-CT-----TCEEEECCSCCHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH--HHHHHh-ch-----hcccccccccchHHHHHHH
Confidence 446788999999999875 77778888776544466666665444 333432 11 11111100 0111
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+......+|+|+-. .+.+. .++...++|+| ||++++.
T Consensus 245 ~~~t~g~g~Dvvid~-----~g~~~---~~~~~~~~l~~-~G~iv~~ 282 (363)
T 3m6i_A 245 VESFGGIEPAVALEC-----TGVES---SIAAAIWAVKF-GGKVFVI 282 (363)
T ss_dssp HHHTSSCCCSEEEEC-----SCCHH---HHHHHHHHSCT-TCEEEEC
T ss_pred HHHhCCCCCCEEEEC-----CCChH---HHHHHHHHhcC-CCEEEEE
Confidence 111123479999864 23321 57889999999 9999875
No 323
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.28 E-value=0.82 Score=43.11 Aligned_cols=96 Identities=17% Similarity=0.274 Sum_probs=55.6
Q ss_pred cCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC-cCCCCCCCc
Q 019282 177 SHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD-FTKFGSGVV 254 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d-l~~~~~~~~ 254 (343)
.+++++.+||-+|+|. |..+..+++.... .+.+++.+.... +.++++ |. . ..+.....+ .... .+.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~--~~a~~l---Ga---~-~vi~~~~~~~~~~~--~~g 257 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKR--EAAKAL---GA---D-EVVNSRNADEMAAH--LKS 257 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGH--HHHHHH---TC---S-EEEETTCHHHHHTT--TTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH--HHHHHc---CC---c-EEeccccHHHHHHh--hcC
Confidence 5788999999999975 7777777776542 344555544433 333332 21 1 112111111 1112 147
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+|+|+-...- .. .++...+.|+| ||++++.
T Consensus 258 ~Dvvid~~g~-----~~---~~~~~~~~l~~-~G~iv~~ 287 (369)
T 1uuf_A 258 FDFILNTVAA-----PH---NLDDFTTLLKR-DGTMTLV 287 (369)
T ss_dssp EEEEEECCSS-----CC---CHHHHHTTEEE-EEEEEEC
T ss_pred CCEEEECCCC-----HH---HHHHHHHHhcc-CCEEEEe
Confidence 9999864321 11 36778899999 9998764
No 324
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.16 E-value=0.85 Score=42.80 Aligned_cols=101 Identities=21% Similarity=0.240 Sum_probs=58.4
Q ss_pred HHHhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----
Q 019282 173 LAEASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT---- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~---- 247 (343)
+.+...++++.+||-+|+|. |..+..+++..+. .+.+++ .+....+.++++ |. . ..+..+..++.
T Consensus 181 l~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~--~~~~~~~~~~~l---Ga---~-~vi~~~~~~~~~~v~ 250 (363)
T 3uog_A 181 LVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTS--SSREKLDRAFAL---GA---D-HGINRLEEDWVERVY 250 (363)
T ss_dssp HTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEE--SCHHHHHHHHHH---TC---S-EEEETTTSCHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEe--cCchhHHHHHHc---CC---C-EEEcCCcccHHHHHH
Confidence 33456788999999999875 7777777776442 444444 444444444432 22 1 11211111211
Q ss_pred CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.......+|+|+-... .. .+....++|+| ||++++.
T Consensus 251 ~~~~g~g~D~vid~~g-----~~----~~~~~~~~l~~-~G~iv~~ 286 (363)
T 3uog_A 251 ALTGDRGADHILEIAG-----GA----GLGQSLKAVAP-DGRISVI 286 (363)
T ss_dssp HHHTTCCEEEEEEETT-----SS----CHHHHHHHEEE-EEEEEEE
T ss_pred HHhCCCCceEEEECCC-----hH----HHHHHHHHhhc-CCEEEEE
Confidence 0112347999986432 11 46778899999 9999876
No 325
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.11 E-value=2.4 Score=39.77 Aligned_cols=102 Identities=12% Similarity=0.111 Sum_probs=61.2
Q ss_pred HHHhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecc--cCCcC--
Q 019282 173 LAEASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGE--DMDFT-- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~--~~dl~-- 247 (343)
+.+...++++.+||=+|+|. |.++..+++......+.+++.+... .+.++++ |. . ..+... ..++.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~--~~~a~~l---Ga---~-~vi~~~~~~~~~~~~ 255 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKK--YETAKKF---GV---N-EFVNPKDHDKPIQEV 255 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTH--HHHHHTT---TC---C-EEECGGGCSSCHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH--HHHHHHc---CC---c-EEEccccCchhHHHH
Confidence 44556788999999999974 7777888877654455555555543 4444442 21 1 122111 11111
Q ss_pred --CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCC-cEEEEE
Q 019282 248 --KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYD-GRIFVS 293 (343)
Q Consensus 248 --~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~G-G~lvi~ 293 (343)
+. .++.+|+|+-. .+.. ..++...+.|+| | |++++.
T Consensus 256 i~~~-~~gg~D~vid~-----~g~~---~~~~~~~~~l~~-g~G~iv~~ 294 (378)
T 3uko_A 256 IVDL-TDGGVDYSFEC-----IGNV---SVMRAALECCHK-GWGTSVIV 294 (378)
T ss_dssp HHHH-TTSCBSEEEEC-----SCCH---HHHHHHHHTBCT-TTCEEEEC
T ss_pred HHHh-cCCCCCEEEEC-----CCCH---HHHHHHHHHhhc-cCCEEEEE
Confidence 11 12479999864 2332 268889999999 9 998764
No 326
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=87.88 E-value=1.9 Score=40.13 Aligned_cols=100 Identities=13% Similarity=0.124 Sum_probs=56.9
Q ss_pred HhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc-CCcC-CC--
Q 019282 175 EASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED-MDFT-KF-- 249 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~-~dl~-~~-- 249 (343)
+..+++++.+||-+|+|. |..+..+++.... .+.+++.+. ...+.++++ +. . ..+.... .++. ..
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~--~~~~~~~~l---Ga---~-~~~~~~~~~~~~~~i~~ 231 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSP--RRLEVAKNC---GA---D-VTLVVDPAKEEESSIIE 231 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH--HHHHHHHHT---TC---S-EEEECCTTTSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCH--HHHHHHHHh---CC---C-EEEcCcccccHHHHHHH
Confidence 345788999999999874 6777777776443 344444444 444444432 22 1 1121111 1111 00
Q ss_pred -CC---CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 250 -GS---GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 250 -~~---~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.. ...+|+|+-.. +.. ..++...++|+| ||++++.
T Consensus 232 ~~~~~~g~g~D~vid~~-----g~~---~~~~~~~~~l~~-~G~iv~~ 270 (352)
T 1e3j_A 232 RIRSAIGDLPNVTIDCS-----GNE---KCITIGINITRT-GGTLMLV 270 (352)
T ss_dssp HHHHHSSSCCSEEEECS-----CCH---HHHHHHHHHSCT-TCEEEEC
T ss_pred HhccccCCCCCEEEECC-----CCH---HHHHHHHHHHhc-CCEEEEE
Confidence 01 24689997643 222 157888999999 9999865
No 327
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=87.77 E-value=1.7 Score=40.86 Aligned_cols=103 Identities=10% Similarity=0.031 Sum_probs=57.9
Q ss_pred HHHhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc--CCcCCC
Q 019282 173 LAEASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED--MDFTKF 249 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~--~dl~~~ 249 (343)
+.+..+++++.+||-+|+|. |..+..+++......+.+++.+. ...+.++++ |. . ..+.... .++.+.
T Consensus 184 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~--~~~~~~~~l---Ga---~-~vi~~~~~~~~~~~~ 254 (374)
T 1cdo_A 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNP--DKFEKAKVF---GA---T-DFVNPNDHSEPISQV 254 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG--GGHHHHHHT---TC---C-EEECGGGCSSCHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCH--HHHHHHHHh---CC---c-eEEeccccchhHHHH
Confidence 33446788999999999874 67777777765432344444444 333333432 21 1 1121111 111100
Q ss_pred -C--CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCC-cEEEEE
Q 019282 250 -G--SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYD-GRIFVS 293 (343)
Q Consensus 250 -~--~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~G-G~lvi~ 293 (343)
. ..+.+|+|+-.- +.. ..++...++|+| | |++++.
T Consensus 255 ~~~~~~~g~D~vid~~-----g~~---~~~~~~~~~l~~-~~G~iv~~ 293 (374)
T 1cdo_A 255 LSKMTNGGVDFSLECV-----GNV---GVMRNALESCLK-GWGVSVLV 293 (374)
T ss_dssp HHHHHTSCBSEEEECS-----CCH---HHHHHHHHTBCT-TTCEEEEC
T ss_pred HHHHhCCCCCEEEECC-----CCH---HHHHHHHHHhhc-CCcEEEEE
Confidence 0 123689997642 222 257889999999 9 998764
No 328
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=87.36 E-value=3 Score=39.07 Aligned_cols=102 Identities=12% Similarity=-0.002 Sum_probs=58.9
Q ss_pred HHHhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc--CCcC--
Q 019282 173 LAEASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED--MDFT-- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~--~dl~-- 247 (343)
+.+...++++.+||-+|+|. |..+..+++......+.+++.+.. ..+.++++ |. . ..+.... .++.
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~--~~~~a~~l---Ga---~-~vi~~~~~~~~~~~~ 253 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKD--KFPKAIEL---GA---T-ECLNPKDYDKPIYEV 253 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGG--GHHHHHHT---TC---S-EEECGGGCSSCHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHH--HHHHHHHc---CC---c-EEEecccccchHHHH
Confidence 33456788999999999874 777777777654334444544443 33334432 21 1 1121111 1111
Q ss_pred --CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCC-cEEEEE
Q 019282 248 --KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYD-GRIFVS 293 (343)
Q Consensus 248 --~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~G-G~lvi~ 293 (343)
+. ..+.+|+|+-. .+.. ..++...++|+| + |++++.
T Consensus 254 i~~~-t~gg~Dvvid~-----~g~~---~~~~~~~~~l~~-~~G~iv~~ 292 (373)
T 1p0f_A 254 ICEK-TNGGVDYAVEC-----AGRI---ETMMNALQSTYC-GSGVTVVL 292 (373)
T ss_dssp HHHH-TTSCBSEEEEC-----SCCH---HHHHHHHHTBCT-TTCEEEEC
T ss_pred HHHH-hCCCCCEEEEC-----CCCH---HHHHHHHHHHhc-CCCEEEEE
Confidence 11 12379999864 2222 257889999999 9 998764
No 329
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=87.21 E-value=2.1 Score=40.18 Aligned_cols=102 Identities=13% Similarity=0.039 Sum_probs=57.6
Q ss_pred HHHhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc--CCcC--
Q 019282 173 LAEASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED--MDFT-- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~--~dl~-- 247 (343)
+.+..+++++.+||-+|+|. |..+..+++......+.+++.+. ...+.++++ |. . ..+.... .++.
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~--~~~~~~~~l---Ga---~-~vi~~~~~~~~~~~~ 253 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINK--DKFAKAKEV---GA---T-ECVNPQDYKKPIQEV 253 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG--GGHHHHHHT---TC---S-EEECGGGCSSCHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH--HHHHHHHHh---CC---c-eEecccccchhHHHH
Confidence 33446788999999999875 66777777765432344444444 333333432 21 1 1121111 1111
Q ss_pred --CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCC-cEEEEE
Q 019282 248 --KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYD-GRIFVS 293 (343)
Q Consensus 248 --~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~G-G~lvi~ 293 (343)
+. ..+.+|+|+-. .+.. ..++...++|++ | |++++.
T Consensus 254 ~~~~-~~~g~D~vid~-----~g~~---~~~~~~~~~l~~-~~G~iv~~ 292 (374)
T 2jhf_A 254 LTEM-SNGGVDFSFEV-----IGRL---DTMVTALSCCQE-AYGVSVIV 292 (374)
T ss_dssp HHHH-TTSCBSEEEEC-----SCCH---HHHHHHHHHBCT-TTCEEEEC
T ss_pred HHHH-hCCCCcEEEEC-----CCCH---HHHHHHHHHhhc-CCcEEEEe
Confidence 11 12379998764 2222 257889999999 9 998764
No 330
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=86.76 E-value=0.89 Score=43.37 Aligned_cols=101 Identities=12% Similarity=0.113 Sum_probs=54.0
Q ss_pred CCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----CCCCC
Q 019282 178 HITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----KFGSG 252 (343)
Q Consensus 178 ~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~~~~~ 252 (343)
.++++.+||=+|+|. |.++..+++..+.. .++.++.+....++++++. . . ..+.....++. +....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~--~Vi~~~~~~~~~~~~~~lG---a---~-~vi~~~~~~~~~~i~~~t~g 280 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGAS--KVILSEPSEVRRNLAKELG---A---D-HVIDPTKENFVEAVLDYTNG 280 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHT---C---S-EEECTTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEECCCHHHHHHHHHcC---C---C-EEEcCCCCCHHHHHHHHhCC
Confidence 678999999999864 66667777764432 4555555555555555432 1 1 11211111211 11123
Q ss_pred CceeEEEEccccccCCchH--HHHHHHHHHhccCCCCcEEEEE
Q 019282 253 VVYDLIYASAVFLHMPDKL--VWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~--~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+|+|+-. .+... ....++.+.+.+++ ||++++.
T Consensus 281 ~g~D~vid~-----~g~~~~~~~~~~~~l~~~~~~-~G~iv~~ 317 (404)
T 3ip1_A 281 LGAKLFLEA-----TGVPQLVWPQIEEVIWRARGI-NATVAIV 317 (404)
T ss_dssp CCCSEEEEC-----SSCHHHHHHHHHHHHHHCSCC-CCEEEEC
T ss_pred CCCCEEEEC-----CCCcHHHHHHHHHHHHhccCC-CcEEEEe
Confidence 369999753 33331 11233333455599 9999875
No 331
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=86.69 E-value=2.1 Score=40.19 Aligned_cols=103 Identities=11% Similarity=0.019 Sum_probs=58.0
Q ss_pred HHHhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc--CCcCCC
Q 019282 173 LAEASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED--MDFTKF 249 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~--~dl~~~ 249 (343)
+.+...++++.+||-+|+|. |.++..+++......+.+++.+. ...+.++++ |. . ..+.... .++.+.
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~~~~a~~l---Ga---~-~vi~~~~~~~~~~~~ 257 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDING--EKFPKAKAL---GA---T-DCLNPRELDKPVQDV 257 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG--GGHHHHHHT---TC---S-EEECGGGCSSCHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH--HHHHHHHHh---CC---c-EEEccccccchHHHH
Confidence 34456788999999999874 67777777765432344444444 333434432 21 1 1121111 111100
Q ss_pred -C--CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCC-cEEEEE
Q 019282 250 -G--SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYD-GRIFVS 293 (343)
Q Consensus 250 -~--~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~G-G~lvi~ 293 (343)
. ..+.+|+|+-. .+.. ..++...+.|++ | |++++.
T Consensus 258 v~~~~~~g~Dvvid~-----~G~~---~~~~~~~~~l~~-~~G~iv~~ 296 (376)
T 1e3i_A 258 ITELTAGGVDYSLDC-----AGTA---QTLKAAVDCTVL-GWGSCTVV 296 (376)
T ss_dssp HHHHHTSCBSEEEES-----SCCH---HHHHHHHHTBCT-TTCEEEEC
T ss_pred HHHHhCCCccEEEEC-----CCCH---HHHHHHHHHhhc-CCCEEEEE
Confidence 0 12368998753 2222 267889999999 9 998764
No 332
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=86.01 E-value=3.8 Score=38.26 Aligned_cols=102 Identities=11% Similarity=0.070 Sum_probs=58.0
Q ss_pred HHHhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc--CCcC--
Q 019282 173 LAEASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED--MDFT-- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~--~dl~-- 247 (343)
+.+..+++++.+||-+|+|. |.++..+++......+.+++.+... .+.++++ |. . ..+.... .++.
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~--~~~~~~l---Ga---~-~vi~~~~~~~~~~~~ 252 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK--FARAKEF---GA---T-ECINPQDFSKPIQEV 252 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGG--HHHHHHH---TC---S-EEECGGGCSSCHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH--HHHHHHc---CC---c-eEeccccccccHHHH
Confidence 33446788999999999874 6777777776543344444444433 3333332 21 1 1121111 1111
Q ss_pred --CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCC-cEEEEE
Q 019282 248 --KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYD-GRIFVS 293 (343)
Q Consensus 248 --~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~G-G~lvi~ 293 (343)
+. ..+.+|+|+-. .+.. ..++...+.|+| + |++++.
T Consensus 253 v~~~-~~~g~D~vid~-----~g~~---~~~~~~~~~l~~-~~G~iv~~ 291 (373)
T 2fzw_A 253 LIEM-TDGGVDYSFEC-----IGNV---KVMRAALEACHK-GWGVSVVV 291 (373)
T ss_dssp HHHH-TTSCBSEEEEC-----SCCH---HHHHHHHHTBCT-TTCEEEEC
T ss_pred HHHH-hCCCCCEEEEC-----CCcH---HHHHHHHHhhcc-CCcEEEEE
Confidence 11 12379999764 2222 257889999999 9 998764
No 333
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=85.84 E-value=2.2 Score=35.68 Aligned_cols=50 Identities=20% Similarity=0.215 Sum_probs=40.0
Q ss_pred chHHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcCh
Q 019282 165 GGRDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDE 215 (343)
Q Consensus 165 ~~~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~ 215 (343)
.++..+++......-.+| -|||+|-|+|+.=.++.+.++...+++.|-..
T Consensus 25 aQR~~L~~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR~~ 74 (174)
T 3iht_A 25 SQRACLEHAIAQTAGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFERAV 74 (174)
T ss_dssp HHHHHHHHHHHHTTTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEESSC
T ss_pred HHHHHHHHHHHHhcCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEeee
Confidence 356677777766554444 69999999999999999999999999998543
No 334
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=85.11 E-value=6.6 Score=37.51 Aligned_cols=42 Identities=19% Similarity=0.211 Sum_probs=29.7
Q ss_pred cCCCCCCeEEEEcCCcCHHHHHHHHHcC-------CCceEEEEcChhHH
Q 019282 177 SHITPNSHVLEIGCGTLRVGVHFIRYLN-------PENFHCLERDELSL 218 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGtG~~a~~la~~~~-------~~~~~vvdid~s~~ 218 (343)
...+...+|+|+|.|+|.++..+++++. ...++.+++++...
T Consensus 76 ~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr 124 (387)
T 1zkd_A 76 ADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLR 124 (387)
T ss_dssp TTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHH
T ss_pred cCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHH
Confidence 3445556899999999999999987653 23566676666443
No 335
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=85.02 E-value=1.7 Score=40.12 Aligned_cols=99 Identities=17% Similarity=0.187 Sum_probs=56.9
Q ss_pred HhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----C
Q 019282 175 EASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----K 248 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~ 248 (343)
+...++++.+||-+|+ |.|..+..+++..+ ..+.+++. +....+.+++. +. . ..+.....++. +
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~--~~~~~~~~~~~---ga---~-~~~~~~~~~~~~~~~~ 211 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVAS--TDEKLKIAKEY---GA---E-YLINASKEDILRQVLK 211 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEES--SHHHHHHHHHT---TC---S-EEEETTTSCHHHHHHH
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC--CHHHHHHHHHc---CC---c-EEEeCCCchHHHHHHH
Confidence 3357889999999994 46777777776543 24444444 44444444442 11 1 12221112221 0
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
......+|+|+-... .. .++.+.++|+| ||++++.
T Consensus 212 ~~~~~g~D~vid~~g-----~~----~~~~~~~~l~~-~G~iv~~ 246 (334)
T 3qwb_A 212 FTNGKGVDASFDSVG-----KD----TFEISLAALKR-KGVFVSF 246 (334)
T ss_dssp HTTTSCEEEEEECCG-----GG----GHHHHHHHEEE-EEEEEEC
T ss_pred HhCCCCceEEEECCC-----hH----HHHHHHHHhcc-CCEEEEE
Confidence 111346999986532 21 57788899999 9999875
No 336
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=84.93 E-value=1.2 Score=41.76 Aligned_cols=102 Identities=10% Similarity=0.180 Sum_probs=59.8
Q ss_pred HHHhcCCC-----CCCeEEEEc-CC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc--
Q 019282 173 LAEASHIT-----PNSHVLEIG-CG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED-- 243 (343)
Q Consensus 173 l~~~~~l~-----~~~rVLDIG-CG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~-- 243 (343)
+.+...+. ++.+||=+| +| .|.++..+++.+... .++.++.+....+.++++. . . ..+....
T Consensus 158 l~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~--~Vi~~~~~~~~~~~~~~lG---a---d-~vi~~~~~~ 228 (363)
T 4dvj_A 158 FFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL--TVIATASRPETQEWVKSLG---A---H-HVIDHSKPL 228 (363)
T ss_dssp HHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS--EEEEECSSHHHHHHHHHTT---C---S-EEECTTSCH
T ss_pred HHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHcC---C---C-EEEeCCCCH
Confidence 33445666 788999998 54 588888888764334 4555555555555555432 1 1 1121110
Q ss_pred -CCcCCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 244 -MDFTKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 244 -~dl~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+.+. ..+.+|+|+-. .+.. ..++.+.++|+| ||++++.
T Consensus 229 ~~~v~~~-~~~g~Dvvid~-----~g~~---~~~~~~~~~l~~-~G~iv~~ 269 (363)
T 4dvj_A 229 AAEVAAL-GLGAPAFVFST-----THTD---KHAAEIADLIAP-QGRFCLI 269 (363)
T ss_dssp HHHHHTT-CSCCEEEEEEC-----SCHH---HHHHHHHHHSCT-TCEEEEC
T ss_pred HHHHHHh-cCCCceEEEEC-----CCch---hhHHHHHHHhcC-CCEEEEE
Confidence 011212 23579998763 2222 267889999999 9999875
No 337
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=84.71 E-value=0.28 Score=45.60 Aligned_cols=102 Identities=19% Similarity=0.240 Sum_probs=58.7
Q ss_pred HHHHhcCCCCCCeEEEEcCC--cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC--
Q 019282 172 FLAEASHITPNSHVLEIGCG--TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT-- 247 (343)
Q Consensus 172 ~l~~~~~l~~~~rVLDIGCG--tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~-- 247 (343)
.+.+...++++.+||-+|+| .|..+..+++..+. .+.+++.+...... +++. +. . ..+.....++.
T Consensus 135 ~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~--~~~l---ga---~-~~~~~~~~~~~~~ 204 (340)
T 3gms_A 135 TCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEE--LLRL---GA---A-YVIDTSTAPLYET 204 (340)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHH--HHHH---TC---S-EEEETTTSCHHHH
T ss_pred HHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHH--HHhC---CC---c-EEEeCCcccHHHH
Confidence 34455788999999999987 67788888876543 55566655543333 3332 11 1 11221112221
Q ss_pred --CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 --KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 --~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+......+|+|+-.. +.. .+....++|+| ||++++.
T Consensus 205 ~~~~~~~~g~Dvvid~~-----g~~----~~~~~~~~l~~-~G~iv~~ 242 (340)
T 3gms_A 205 VMELTNGIGADAAIDSI-----GGP----DGNELAFSLRP-NGHFLTI 242 (340)
T ss_dssp HHHHTTTSCEEEEEESS-----CHH----HHHHHHHTEEE-EEEEEEC
T ss_pred HHHHhCCCCCcEEEECC-----CCh----hHHHHHHHhcC-CCEEEEE
Confidence 111234799998643 222 22345589999 9999875
No 338
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=84.46 E-value=0.95 Score=41.99 Aligned_cols=97 Identities=19% Similarity=0.285 Sum_probs=58.8
Q ss_pred CCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC----CCCC
Q 019282 178 HITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK----FGSG 252 (343)
Q Consensus 178 ~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~----~~~~ 252 (343)
.++++.+||-+|+|. |..+..+++......+.+++.+. ...+.++++ |. . ..+.... ++.+ ....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~--~~~~~~~~l---Ga---~-~~i~~~~-~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDD--DRLALAREV---GA---D-AAVKSGA-GAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCH--HHHHHHHHT---TC---S-EEEECST-THHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCH--HHHHHHHHc---CC---C-EEEcCCC-cHHHHHHHHhCC
Confidence 678899999999975 77888888876445555555544 444444443 21 1 1121111 1110 1112
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+|+|+-. .+... .++...+.|+| ||++++.
T Consensus 238 ~g~d~v~d~-----~G~~~---~~~~~~~~l~~-~G~iv~~ 269 (345)
T 3jv7_A 238 QGATAVFDF-----VGAQS---TIDTAQQVVAV-DGHISVV 269 (345)
T ss_dssp GCEEEEEES-----SCCHH---HHHHHHHHEEE-EEEEEEC
T ss_pred CCCeEEEEC-----CCCHH---HHHHHHHHHhc-CCEEEEE
Confidence 369998763 33322 68889999999 9999875
No 339
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=84.26 E-value=5.3 Score=37.87 Aligned_cols=124 Identities=14% Similarity=0.031 Sum_probs=63.6
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC--C----CCCCcee
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK--F----GSGVVYD 256 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~--~----~~~~~fD 256 (343)
.+++|+-||.|.++..+...- -..+.++++|......- +.+ .. ...++.++..++.. + .....+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~--~~N----~~--~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTH--AIN----FP--RSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHH--HHH----CT--TSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHH--HHh----CC--CCceEecChhhcCHHHHHhhcccCCCee
Confidence 589999999999999988742 12233555555443322 211 11 22333332222210 0 0135799
Q ss_pred EEEEccccccCC-------chHHHHH---HHHHHhccCCCCcEEEEEeccccccCCC---HHHHHHHHHhcCCcE
Q 019282 257 LIYASAVFLHMP-------DKLVWVG---LERLASKLRPYDGRIFVSHNIKFCSRLG---GEECTKRLTSLGLEY 318 (343)
Q Consensus 257 lIvs~~v~~hl~-------~~~~~~~---L~~l~r~LkP~GG~lvi~~~~~~~~~~~---~~~l~~~L~~aGf~~ 318 (343)
+|+...-...+. ++....+ +-++.+.++| -.+++..-..+..... .+.+. .|++.||.+
T Consensus 74 ~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P--~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 74 GIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP--LFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp EEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCC--SEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEE
T ss_pred EEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCC--CEEEEecchHhhccCcHHHHHHHH-HHHcCCCcc
Confidence 999764433221 1111122 3345566788 5555553222222111 45666 889999987
No 340
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=84.11 E-value=2.2 Score=39.33 Aligned_cols=101 Identities=11% Similarity=0.052 Sum_probs=56.9
Q ss_pred HHHhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHH-hcccCCCCCCCcEEEeccc-CCcCC
Q 019282 173 LAEASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRY-ELPSQGLLHKRPIIVRGED-MDFTK 248 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~-~~~~~~~~~~~~~~~~~~~-~dl~~ 248 (343)
+.+...++++.+||-+|+ |.|..+..+++..+ ..+.+++.+. ...+.++ +. +. . ..+.... .++.+
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~--~~~~~~~~~~---g~---~-~~~d~~~~~~~~~ 216 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSK--EKVDLLKTKF---GF---D-DAFNYKEESDLTA 216 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSH--HHHHHHHHTS---CC---S-EEEETTSCSCSHH
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCH--HHHHHHHHHc---CC---c-eEEecCCHHHHHH
Confidence 334467889999999997 56777777776543 2444444443 3333333 22 21 1 1221111 11110
Q ss_pred C-C--CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 F-G--SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~-~--~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
. . ..+.+|+|+.... . ..++...++|+| ||++++.
T Consensus 217 ~~~~~~~~~~d~vi~~~g-----~----~~~~~~~~~l~~-~G~~v~~ 254 (345)
T 2j3h_A 217 ALKRCFPNGIDIYFENVG-----G----KMLDAVLVNMNM-HGRIAVC 254 (345)
T ss_dssp HHHHHCTTCEEEEEESSC-----H----HHHHHHHTTEEE-EEEEEEC
T ss_pred HHHHHhCCCCcEEEECCC-----H----HHHHHHHHHHhc-CCEEEEE
Confidence 0 0 1246999986532 2 167889999999 9999764
No 341
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=83.76 E-value=2.9 Score=39.12 Aligned_cols=100 Identities=17% Similarity=0.126 Sum_probs=58.2
Q ss_pred HHHhcCCCCCCeEEEEc--CCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC---
Q 019282 173 LAEASHITPNSHVLEIG--CGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT--- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIG--CGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~--- 247 (343)
+.+...++++.+||-+| .|.|..+..+++..+. .+.+++. +....+.+++. +. . ..+.....++.
T Consensus 155 l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~--~~~~~~~~~~~---Ga---~-~~~~~~~~~~~~~~ 224 (362)
T 2c0c_A 155 LKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCS--SDEKSAFLKSL---GC---D-RPINYKTEPVGTVL 224 (362)
T ss_dssp HHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEES--SHHHHHHHHHT---TC---S-EEEETTTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEEC--CHHHHHHHHHc---CC---c-EEEecCChhHHHHH
Confidence 33445788999999999 4578888888876532 3444444 43344434432 21 1 12221111211
Q ss_pred -CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 -KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 -~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.. ..+.+|+|+-... . ..++.+.++|++ +|++++.
T Consensus 225 ~~~-~~~g~D~vid~~g-----~----~~~~~~~~~l~~-~G~iv~~ 260 (362)
T 2c0c_A 225 KQE-YPEGVDVVYESVG-----G----AMFDLAVDALAT-KGRLIVI 260 (362)
T ss_dssp HHH-CTTCEEEEEECSC-----T----HHHHHHHHHEEE-EEEEEEC
T ss_pred HHh-cCCCCCEEEECCC-----H----HHHHHHHHHHhc-CCEEEEE
Confidence 01 1246999986532 2 267889999999 9998765
No 342
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=83.26 E-value=1.9 Score=34.46 Aligned_cols=112 Identities=17% Similarity=0.123 Sum_probs=57.3
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCC--ceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--CCCceeE
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPE--NFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG--SGVVYDL 257 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~--~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~--~~~~fDl 257 (343)
..+|+=+|| |.++..+++.+... .+++++.++ ......++ .+ ...+.++..+-..+. .-..+|+
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~--~~~~~~~~---~g-----~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLASDIPLVVIETSR--TRVDELRE---RG-----VRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCH--HHHHHHHH---TT-----CEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCH--HHHHHHHH---cC-----CCEEECCCCCHHHHHhcCcccCCE
Confidence 357888887 55677777665333 455555554 33332222 12 223433222211010 1246888
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEE
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYI 319 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v 319 (343)
|++. +++......+-...+.+.| +..++.... ..+..+.|++.|-..+
T Consensus 75 vi~~-----~~~~~~n~~~~~~a~~~~~-~~~iiar~~--------~~~~~~~l~~~G~d~v 122 (140)
T 3fwz_A 75 LILT-----IPNGYEAGEIVASARAKNP-DIEIIARAH--------YDDEVAYITERGANQV 122 (140)
T ss_dssp EEEC-----CSCHHHHHHHHHHHHHHCS-SSEEEEEES--------SHHHHHHHHHTTCSEE
T ss_pred EEEE-----CCChHHHHHHHHHHHHHCC-CCeEEEEEC--------CHHHHHHHHHCCCCEE
Confidence 8764 3443332234456677788 777655432 1234467788887643
No 343
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=83.12 E-value=0.54 Score=43.36 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=58.3
Q ss_pred HHHhcCCCCCCeEEEEc-C-CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC---
Q 019282 173 LAEASHITPNSHVLEIG-C-GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT--- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIG-C-GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~--- 247 (343)
+.+...++++.+||-+| + |.|..+..+++..+. .+.+++.+. ...+.+++. +. . ..+.....++.
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~--~~~~~~~~~---Ga---~-~~~~~~~~~~~~~~ 201 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSP--EKAAHAKAL---GA---W-ETIDYSHEDVAKRV 201 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSH--HHHHHHHHH---TC---S-EEEETTTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCH--HHHHHHHHc---CC---C-EEEeCCCccHHHHH
Confidence 33445788999999998 3 467777777776543 445555444 334444432 21 1 12221112211
Q ss_pred -CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 -KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 -~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+......+|+|+-... .. .+....++|+| ||++++.
T Consensus 202 ~~~~~~~g~Dvvid~~g-----~~----~~~~~~~~l~~-~G~iv~~ 238 (325)
T 3jyn_A 202 LELTDGKKCPVVYDGVG-----QD----TWLTSLDSVAP-RGLVVSF 238 (325)
T ss_dssp HHHTTTCCEEEEEESSC-----GG----GHHHHHTTEEE-EEEEEEC
T ss_pred HHHhCCCCceEEEECCC-----hH----HHHHHHHHhcC-CCEEEEE
Confidence 1112347999986432 21 56788999999 9999875
No 344
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=82.92 E-value=1 Score=41.81 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=56.2
Q ss_pred CCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc-CCc-CCCCCCCc
Q 019282 178 HITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED-MDF-TKFGSGVV 254 (343)
Q Consensus 178 ~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~-~dl-~~~~~~~~ 254 (343)
.+ ++.+||-+|+|. |..+..+++... .+..++.++.+....+.++++ |. . ..+.... .+. ........
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~-~Ga~Vi~~~~~~~~~~~~~~l---Ga---~-~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALM-KNITIVGISRSKKHRDFALEL---GA---D-YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHC-TTCEEEEECSCHHHHHHHHHH---TC---S-EEECHHHHHHHHHHHHTTCC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHh---CC---C-EEeccccchHHHHHhhcCCC
Confidence 67 899999999974 667777777651 023455555555555544442 21 1 1121111 111 11111237
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+|+|+-.- +.. ..++...++|+| ||++++.
T Consensus 239 ~D~vid~~-----g~~---~~~~~~~~~l~~-~G~iv~~ 268 (344)
T 2h6e_A 239 ASIAIDLV-----GTE---ETTYNLGKLLAQ-EGAIILV 268 (344)
T ss_dssp EEEEEESS-----CCH---HHHHHHHHHEEE-EEEEEEC
T ss_pred ccEEEECC-----CCh---HHHHHHHHHhhc-CCEEEEe
Confidence 99998643 222 257889999999 9998764
No 345
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=82.67 E-value=6.9 Score=36.45 Aligned_cols=125 Identities=11% Similarity=0.103 Sum_probs=62.6
Q ss_pred CeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCC----CCceeE
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGS----GVVYDL 257 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~----~~~fDl 257 (343)
.+|||+-||.|.++..+....- ...+.+++++.........+ ... ..++.+ |+.++.. ...+|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N------~~~--~~~~~~---Di~~~~~~~~~~~~~D~ 71 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYN------FPH--TQLLAK---TIEGITLEEFDRLSFDM 71 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH------CTT--SCEECS---CGGGCCHHHHHHHCCSE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHh------ccc--cccccC---CHHHccHhHcCcCCcCE
Confidence 5899999999999999887421 12344555655444333221 111 112333 3332221 115899
Q ss_pred EEEccccccCCc--------hHHHHHHH---HHHhccC--CCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 258 IYASAVFLHMPD--------KLVWVGLE---RLASKLR--PYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 258 Ivs~~v~~hl~~--------~~~~~~L~---~l~r~Lk--P~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
|+...-...+.. +.....+. ++.+.++ | -.+++..-..+......+.+.+.|++.||.+..
T Consensus 72 l~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P--~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~~ 145 (343)
T 1g55_A 72 ILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLP--KYILLENVKGFEVSSTRDLLIQTIENCGFQYQE 145 (343)
T ss_dssp EEECCC------------------CHHHHHHHHGGGCSSCC--SEEEEEEETTGGGSHHHHHHHHHHHHTTEEEEE
T ss_pred EEEcCCCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCC--CEEEEeCCccccCHHHHHHHHHHHHHCCCeeEE
Confidence 998654322211 11111223 4555666 7 355554222222222256788889999997654
No 346
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=82.39 E-value=2.1 Score=41.08 Aligned_cols=47 Identities=4% Similarity=-0.099 Sum_probs=33.3
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHH-HHcCCCceEEEEcChhHHHHHHHHh
Q 019282 178 HITPNSHVLEIGCGTLRVGVHFI-RYLNPENFHCLERDELSLMAAFRYE 225 (343)
Q Consensus 178 ~l~~~~rVLDIGCGtG~~a~~la-~~~~~~~~~vvdid~s~~~~a~a~~ 225 (343)
.++++..|+|||++.|.++..++ +..+. ...++.+++.+...+..++
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~-~~~V~afEP~p~~~~~L~~ 270 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGK-FERVWMIEPDRINLQTLQN 270 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSC-CSEEEEECCCHHHHHHHHH
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCC-CCEEEEEcCCHHHHHHHHH
Confidence 35788999999999999999988 43332 2356667776665554444
No 347
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.39 E-value=8.7 Score=35.17 Aligned_cols=102 Identities=13% Similarity=0.103 Sum_probs=58.9
Q ss_pred HHhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC----
Q 019282 174 AEASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK---- 248 (343)
Q Consensus 174 ~~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~---- 248 (343)
.....+.++.+||=+|+|. |.++..+++......+.+++.+.. ..++++++. . ...+.....+..+
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~--k~~~a~~lG---a----~~~i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSE--KLALAKSFG---A----MQTFNSSEMSAPQMQSV 223 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH--HHHHHHHTT---C----SEEEETTTSCHHHHHHH
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHH--HHHHHHHcC---C----eEEEeCCCCCHHHHHHh
Confidence 3446788999999999874 556666677665544555655554 344444432 1 1122222222211
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
......+|+|+-. .+.. ..++...++|+| ||++++.
T Consensus 224 ~~~~~g~d~v~d~-----~G~~---~~~~~~~~~l~~-~G~~v~~ 259 (346)
T 4a2c_A 224 LRELRFNQLILET-----AGVP---QTVELAVEIAGP-HAQLALV 259 (346)
T ss_dssp HGGGCSSEEEEEC-----SCSH---HHHHHHHHHCCT-TCEEEEC
T ss_pred hcccCCccccccc-----cccc---chhhhhhheecC-CeEEEEE
Confidence 1122457877653 2222 267888999999 9999875
No 348
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=82.34 E-value=8.8 Score=35.81 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=83.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCC---------------------CCCCCcEEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQG---------------------LLHKRPIIV 239 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~---------------------~~~~~~~~~ 239 (343)
+...|+-+|||-=.....+... ...+.+++++|....+..+.+.+...+ +...+...+
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~-~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDE-DLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHT-TCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCC-CCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4568999999987776666542 113578999998777665443322100 012233444
Q ss_pred ecccCCcCC------------CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc----cc-----
Q 019282 240 RGEDMDFTK------------FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI----KF----- 298 (343)
Q Consensus 240 ~~~~~dl~~------------~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~----~~----- 298 (343)
.. |+.+ ++ .+.-=++++-.++.+++......+|+.+.+...+ |.+++-... .|
T Consensus 169 ~~---DL~d~~~l~~~L~~~g~d-~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~--~~~i~yE~i~p~d~fg~~M~ 242 (334)
T 3iei_A 169 GA---DLRDLSELEEKLKKCNMN-TQLPTLLIAECVLVYMTPEQSANLLKWAANSFER--AMFINYEQVNMGDRFGQIMI 242 (334)
T ss_dssp EC---CTTCHHHHHHHHHHTTCC-TTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS--EEEEEEEECCTTSHHHHHHH
T ss_pred cc---ccccchhHHHHHHhcCCC-CCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC--ceEEEEeccCCCCHHHHHHH
Confidence 33 3322 21 2345678888899999999998999999988765 555443211 01
Q ss_pred ----------c---cCCCHHHHHHHHHhcCCcEEEee
Q 019282 299 ----------C---SRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 299 ----------~---~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
. ...++++..+++.++||+.+...
T Consensus 243 ~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 243 ENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp HHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceee
Confidence 0 01136788899999999986543
No 349
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=82.10 E-value=3.6 Score=38.24 Aligned_cols=101 Identities=17% Similarity=0.194 Sum_probs=56.3
Q ss_pred HHHhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC---
Q 019282 173 LAEASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT--- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~--- 247 (343)
+.+..+++++.+||-+|+ |.|..+..+++..+ ..+.+++.+. ...+.+++. +. . ..+.....++.
T Consensus 162 l~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~--~~~~~~~~~---ga---~-~~~d~~~~~~~~~~ 231 (351)
T 1yb5_A 162 LIHSACVKAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTE--EGQKIVLQN---GA---H-EVFNHREVNYIDKI 231 (351)
T ss_dssp HHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSH--HHHHHHHHT---TC---S-EEEETTSTTHHHHH
T ss_pred HHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCh--hHHHHHHHc---CC---C-EEEeCCCchHHHHH
Confidence 333467889999999997 55666666666543 2444444444 333333332 11 1 12221111111
Q ss_pred -CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 -KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 -~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+......+|+|+.+.. .. .+....++|+| ||++++.
T Consensus 232 ~~~~~~~~~D~vi~~~G-----~~----~~~~~~~~l~~-~G~iv~~ 268 (351)
T 1yb5_A 232 KKYVGEKGIDIIIEMLA-----NV----NLSKDLSLLSH-GGRVIVV 268 (351)
T ss_dssp HHHHCTTCEEEEEESCH-----HH----HHHHHHHHEEE-EEEEEEC
T ss_pred HHHcCCCCcEEEEECCC-----hH----HHHHHHHhccC-CCEEEEE
Confidence 0001236999987533 11 46778999999 9998764
No 350
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=81.40 E-value=3.3 Score=38.32 Aligned_cols=100 Identities=12% Similarity=0.165 Sum_probs=56.5
Q ss_pred hcCCCCCCeEEEEcCC--cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc----CCC
Q 019282 176 ASHITPNSHVLEIGCG--TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF----TKF 249 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCG--tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl----~~~ 249 (343)
...++++.+||-+|+| .|..+..+++......+.+++.+.. ..+.+++. +. . ..+.....+. .+.
T Consensus 165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~--~~~~~~~~---g~---~-~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE--AVEAAKRA---GA---D-YVINASMQDPLAEIRRI 235 (347)
T ss_dssp HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH--HHHHHHHH---TC---S-EEEETTTSCHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHH--HHHHHHHh---CC---C-EEecCCCccHHHHHHHH
Confidence 3678899999999997 5666666666541234445554443 33333332 11 1 1122111121 111
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
...+.+|+|+.... .. ..++...++|+| +|++++.
T Consensus 236 ~~~~~~d~vi~~~g-----~~---~~~~~~~~~l~~-~G~iv~~ 270 (347)
T 1jvb_A 236 TESKGVDAVIDLNN-----SE---KTLSVYPKALAK-QGKYVMV 270 (347)
T ss_dssp TTTSCEEEEEESCC-----CH---HHHTTGGGGEEE-EEEEEEC
T ss_pred hcCCCceEEEECCC-----CH---HHHHHHHHHHhc-CCEEEEE
Confidence 11147999986533 22 257888999999 9998764
No 351
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=80.95 E-value=3.7 Score=37.92 Aligned_cols=97 Identities=15% Similarity=0.162 Sum_probs=56.0
Q ss_pred cCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----CCC
Q 019282 177 SHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----KFG 250 (343)
Q Consensus 177 ~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~~~ 250 (343)
..++++.+||-+|+ |.|..+..+++... ..+.+++.+. ...+.+++. +. . ..+.....++. +..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~--~~~~~~~~~---ga---~-~~~d~~~~~~~~~~~~~~ 231 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSE--DKLRRAKAL---GA---D-ETVNYTHPDWPKEVRRLT 231 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSH--HHHHHHHHH---TC---S-EEEETTSTTHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCH--HHHHHHHhc---CC---C-EEEcCCcccHHHHHHHHh
Confidence 47788999999998 67777777777643 2444455444 333333332 21 1 11221111211 111
Q ss_pred CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 251 SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
....+|+|+.... . . .++.+.+.|++ +|+++..
T Consensus 232 ~~~~~d~vi~~~g-~----~----~~~~~~~~l~~-~G~~v~~ 264 (343)
T 2eih_A 232 GGKGADKVVDHTG-A----L----YFEGVIKATAN-GGRIAIA 264 (343)
T ss_dssp TTTCEEEEEESSC-S----S----SHHHHHHHEEE-EEEEEES
T ss_pred CCCCceEEEECCC-H----H----HHHHHHHhhcc-CCEEEEE
Confidence 1247999987543 1 1 46778899999 9998764
No 352
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=80.61 E-value=1.2 Score=41.34 Aligned_cols=100 Identities=10% Similarity=0.189 Sum_probs=57.4
Q ss_pred HHHhcCCC------CCCeEEEEc-CC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC
Q 019282 173 LAEASHIT------PNSHVLEIG-CG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM 244 (343)
Q Consensus 173 l~~~~~l~------~~~rVLDIG-CG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~ 244 (343)
+.+...+. ++.+||=+| +| .|..+..+++.. +..++.++.+....+.+++.. . . ..+... .
T Consensus 136 l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~lG---a---~-~vi~~~-~ 204 (346)
T 3fbg_A 136 LFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAY---GLRVITTASRNETIEWTKKMG---A---D-IVLNHK-E 204 (346)
T ss_dssp HHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEECCSHHHHHHHHHHT---C---S-EEECTT-S
T ss_pred HHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHhcC---C---c-EEEECC-c
Confidence 44456676 889999994 44 566777777754 335665565555555554422 1 1 111111 1
Q ss_pred Cc----CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 245 DF----TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 245 dl----~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
++ .+. ..+.+|+|+-.. +.. ..++.+.++|+| +|+++..
T Consensus 205 ~~~~~~~~~-~~~g~Dvv~d~~-----g~~---~~~~~~~~~l~~-~G~iv~~ 247 (346)
T 3fbg_A 205 SLLNQFKTQ-GIELVDYVFCTF-----NTD---MYYDDMIQLVKP-RGHIATI 247 (346)
T ss_dssp CHHHHHHHH-TCCCEEEEEESS-----CHH---HHHHHHHHHEEE-EEEEEES
T ss_pred cHHHHHHHh-CCCCccEEEECC-----Cch---HHHHHHHHHhcc-CCEEEEE
Confidence 11 111 234699998642 222 257889999999 9999754
No 353
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=80.55 E-value=1.3 Score=39.52 Aligned_cols=63 Identities=14% Similarity=0.250 Sum_probs=40.5
Q ss_pred CCceeEEEEccccccC-C-------c----hHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEE
Q 019282 252 GVVYDLIYASAVFLHM-P-------D----KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYI 319 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl-~-------~----~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v 319 (343)
+++||+|++.--+.-- . . ......|++++++|+| ||.+++.+. ++ ....+...+.+.||...
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~-~g~i~v~~~-d~----~~~~~~~~~~~~gf~~~ 94 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDK-DGSLYIFNT-PF----NCAFICQYLVSKGMIFQ 94 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEE-EEEEEEEEC-HH----HHHHHHHHHHHTTCEEE
T ss_pred ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcC-CeEEEEEcC-cH----HHHHHHHHHHhhcccee
Confidence 4578888876544211 0 0 1234578889999999 999988752 11 12345567788999765
Q ss_pred E
Q 019282 320 G 320 (343)
Q Consensus 320 ~ 320 (343)
.
T Consensus 95 ~ 95 (260)
T 1g60_A 95 N 95 (260)
T ss_dssp E
T ss_pred E
Confidence 5
No 354
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=80.53 E-value=0.57 Score=43.60 Aligned_cols=100 Identities=15% Similarity=0.259 Sum_probs=58.3
Q ss_pred HHHhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC---
Q 019282 173 LAEASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT--- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~--- 247 (343)
+.+...++++.+||-+|+ |.|..+..+++..+. .+.+++.+.... +.+++. +. . ..+... .++.
T Consensus 151 l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~--~~~~~~---ga---~-~v~~~~-~~~~~~v 219 (342)
T 4eye_A 151 YARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAAT--EFVKSV---GA---D-IVLPLE-EGWAKAV 219 (342)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGH--HHHHHH---TC---S-EEEESS-TTHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH--HHHHhc---CC---c-EEecCc-hhHHHHH
Confidence 434567889999999997 567777778776543 455555544433 333332 11 1 112111 1211
Q ss_pred -CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 -KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 -~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+......+|+|+-...- . .+....++|+| ||++++.
T Consensus 220 ~~~~~~~g~Dvvid~~g~-----~----~~~~~~~~l~~-~G~iv~~ 256 (342)
T 4eye_A 220 REATGGAGVDMVVDPIGG-----P----AFDDAVRTLAS-EGRLLVV 256 (342)
T ss_dssp HHHTTTSCEEEEEESCC-----------CHHHHHHTEEE-EEEEEEC
T ss_pred HHHhCCCCceEEEECCch-----h----HHHHHHHhhcC-CCEEEEE
Confidence 11112369999864332 1 46778899999 9999864
No 355
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=80.43 E-value=3.1 Score=38.44 Aligned_cols=98 Identities=17% Similarity=0.178 Sum_probs=55.9
Q ss_pred cCCCCCCeEEEEcCC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC-CC-CCC
Q 019282 177 SHITPNSHVLEIGCG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK-FG-SGV 253 (343)
Q Consensus 177 ~~l~~~~rVLDIGCG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~-~~-~~~ 253 (343)
.+++++.+||-+|+| .|..+..+++.. +..++.++.+....+.+++. +. . ..+.....++.+ .. ..+
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~l---Ga---~-~~~d~~~~~~~~~~~~~~~ 229 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAM---GLNVVAVDIGDEKLELAKEL---GA---D-LVVNPLKEDAAKFMKEKVG 229 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHT---TCEEEEECSCHHHHHHHHHT---TC---S-EEECTTTSCHHHHHHHHHS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHC---CC---C-EEecCCCccHHHHHHHHhC
Confidence 378899999999986 466666666654 33555555554444444432 21 1 112111111110 00 014
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+|+|+-.. +.. ..++...++|++ ||++++.
T Consensus 230 ~~d~vid~~-----g~~---~~~~~~~~~l~~-~G~~v~~ 260 (339)
T 1rjw_A 230 GVHAAVVTA-----VSK---PAFQSAYNSIRR-GGACVLV 260 (339)
T ss_dssp SEEEEEESS-----CCH---HHHHHHHHHEEE-EEEEEEC
T ss_pred CCCEEEECC-----CCH---HHHHHHHHHhhc-CCEEEEe
Confidence 689997643 221 267888999999 9998764
No 356
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=79.98 E-value=4.9 Score=37.11 Aligned_cols=98 Identities=11% Similarity=0.133 Sum_probs=56.0
Q ss_pred cCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecc-cCCcCCCC---
Q 019282 177 SHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGE-DMDFTKFG--- 250 (343)
Q Consensus 177 ~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~-~~dl~~~~--- 250 (343)
..++++.+||-+|+ |.|..+..+++... ..+.+++.+.... +.+++. +. . ..+... ..++.+..
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~--~~~~~~---g~---~-~~~d~~~~~~~~~~~~~~ 234 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKE--ELFRSI---GG---E-VFIDFTKEKDIVGAVLKA 234 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHH--HHHHHT---TC---C-EEEETTTCSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHH--HHHHHc---CC---c-eEEecCccHhHHHHHHHH
Confidence 47889999999998 46777776666543 3455555554443 333332 21 1 122111 11211000
Q ss_pred CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 251 SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+.+|+|+.... .. ..++.+.+.|++ ||++++.
T Consensus 235 ~~~~~D~vi~~~g-----~~---~~~~~~~~~l~~-~G~iv~~ 268 (347)
T 2hcy_A 235 TDGGAHGVINVSV-----SE---AAIEASTRYVRA-NGTTVLV 268 (347)
T ss_dssp HTSCEEEEEECSS-----CH---HHHHHHTTSEEE-EEEEEEC
T ss_pred hCCCCCEEEECCC-----cH---HHHHHHHHHHhc-CCEEEEE
Confidence 1126999987543 21 268889999999 9998764
No 357
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=79.87 E-value=0.96 Score=42.08 Aligned_cols=100 Identities=17% Similarity=0.193 Sum_probs=55.8
Q ss_pred HhcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----CC
Q 019282 175 EASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----KF 249 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~~ 249 (343)
....+ ++.+||-+|+|. |..+..+++......+.+++.+ ....+.+++. +. ...+.....++. +.
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~--~~~~~~~~~~---Ga----~~~~~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPS--DFRRELAKKV---GA----DYVINPFEEDVVKEVMDI 231 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSC--HHHHHHHHHH---TC----SEEECTTTSCHHHHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC--HHHHHHHHHh---CC----CEEECCCCcCHHHHHHHH
Confidence 34567 899999999963 6666677766543244444444 3444434332 11 111211111211 11
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.....+|+|+.... .. ..++.+.+.|++ +|+++..
T Consensus 232 ~~g~g~D~vid~~g-----~~---~~~~~~~~~l~~-~G~iv~~ 266 (348)
T 2d8a_A 232 TDGNGVDVFLEFSG-----AP---KALEQGLQAVTP-AGRVSLL 266 (348)
T ss_dssp TTTSCEEEEEECSC-----CH---HHHHHHHHHEEE-EEEEEEC
T ss_pred cCCCCCCEEEECCC-----CH---HHHHHHHHHHhc-CCEEEEE
Confidence 11236999986432 21 267888999999 9998764
No 358
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=79.52 E-value=2.9 Score=40.56 Aligned_cols=36 Identities=17% Similarity=0.325 Sum_probs=27.7
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcC-----CCceEEEEcChhH
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLN-----PENFHCLERDELS 217 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~-----~~~~~vvdid~s~ 217 (343)
..+|+|+|.|+|.++..+++.+. ...++.+++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~L 178 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGEL 178 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHH
Confidence 46999999999999999987652 2357777776644
No 359
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=79.18 E-value=3.1 Score=38.58 Aligned_cols=83 Identities=12% Similarity=0.021 Sum_probs=49.3
Q ss_pred EEE-ecccCCcCCCCCCCceeEEEEccccccC-------Cc--hHHHHHHHHHHhccCCCCcEEEEEeccccc---cCCC
Q 019282 237 IIV-RGEDMDFTKFGSGVVYDLIYASAVFLHM-------PD--KLVWVGLERLASKLRPYDGRIFVSHNIKFC---SRLG 303 (343)
Q Consensus 237 ~~~-~~~~~dl~~~~~~~~fDlIvs~~v~~hl-------~~--~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~---~~~~ 303 (343)
.++ .++..++.....+++||+|+..--+.-- .+ ......|.+++++|+| ||.+++....... ....
T Consensus 40 ~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~-~G~i~i~~~~~~~~~~~~~~ 118 (319)
T 1eg2_A 40 HVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSP-TGSIAIFGGLQYQGEAGSGD 118 (319)
T ss_dssp EEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEE-EEEEEEEECSCCCCCTTBCC
T ss_pred eEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCC-CeEEEEEcCccccccccccc
Confidence 344 5654443222235689999986544211 00 1234578889999999 9999998653333 1112
Q ss_pred HHHHHHHHHhcC-CcEEE
Q 019282 304 GEECTKRLTSLG-LEYIG 320 (343)
Q Consensus 304 ~~~l~~~L~~aG-f~~v~ 320 (343)
...+...+...| |..+.
T Consensus 119 l~~l~~~i~~~G~~~~~~ 136 (319)
T 1eg2_A 119 LISIISHMRQNSKMLLAN 136 (319)
T ss_dssp HHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHhCcccceeEE
Confidence 345666677778 87655
No 360
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=78.54 E-value=2 Score=38.98 Aligned_cols=92 Identities=17% Similarity=0.116 Sum_probs=53.7
Q ss_pred CCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc-CCcCCCCCCCce
Q 019282 179 ITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED-MDFTKFGSGVVY 255 (343)
Q Consensus 179 l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~-~dl~~~~~~~~f 255 (343)
++++.+||-+|+ |.|..+..+++..+ ..+.+++.+... .+.+++. +. . ..+.... .++.+. . +.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~--~~~~~~~---ga---~-~~~~~~~~~~~~~~-~-~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEK--LALPLAL---GA---E-EAATYAEVPERAKA-W-GGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGG--SHHHHHT---TC---S-EEEEGGGHHHHHHH-T-TSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHH--HHHHHhc---CC---C-EEEECCcchhHHHH-h-cCc
Confidence 888999999997 46777777777654 345555554433 2223332 21 1 1222111 122111 1 469
Q ss_pred eEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 256 DLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
|+|+. .. .. .++...++|+| +|+++..
T Consensus 191 d~vid-~g-----~~----~~~~~~~~l~~-~G~~v~~ 217 (302)
T 1iz0_A 191 DLVLE-VR-----GK----EVEESLGLLAH-GGRLVYI 217 (302)
T ss_dssp EEEEE-CS-----CT----THHHHHTTEEE-EEEEEEC
T ss_pred eEEEE-CC-----HH----HHHHHHHhhcc-CCEEEEE
Confidence 99876 32 11 46788999999 9998764
No 361
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=77.19 E-value=3.4 Score=37.80 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=55.1
Q ss_pred hcCCCCCCeEEEEc--CCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----CC
Q 019282 176 ASHITPNSHVLEIG--CGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----KF 249 (343)
Q Consensus 176 ~~~l~~~~rVLDIG--CGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~~ 249 (343)
..+++++.+||-+| .|.|..+..+++... ..+.+++.+. ...+.+++. +. . ..+.....++. +.
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~--~~~~~~~~~---g~---~-~~~~~~~~~~~~~~~~~ 204 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTA--QKAQSALKA---GA---W-QVINYREEDLVERLKEI 204 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSH--HHHHHHHHH---TC---S-EEEETTTSCHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCH--HHHHHHHHc---CC---C-EEEECCCccHHHHHHHH
Confidence 45788999999999 356666666666544 2445555444 333333322 11 1 11221111111 01
Q ss_pred CCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 250 GSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 250 ~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.....+|+|+.+.. .. .++.+.++|++ ||++++.
T Consensus 205 ~~~~~~D~vi~~~g-----~~----~~~~~~~~l~~-~G~iv~~ 238 (327)
T 1qor_A 205 TGGKKVRVVYDSVG-----RD----TWERSLDCLQR-RGLMVSF 238 (327)
T ss_dssp TTTCCEEEEEECSC-----GG----GHHHHHHTEEE-EEEEEEC
T ss_pred hCCCCceEEEECCc-----hH----HHHHHHHHhcC-CCEEEEE
Confidence 11236999987543 11 57888999999 9998764
No 362
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=77.14 E-value=1.4 Score=41.16 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=55.4
Q ss_pred cCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC-CcCCCCCCCc
Q 019282 177 SHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM-DFTKFGSGVV 254 (343)
Q Consensus 177 ~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~-dl~~~~~~~~ 254 (343)
.+++++.+||-+|+|. |..+..+++..+. .+.+++.+.... +.++++ |. . ..+..... ++.+. ..+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~--~~~~~l---Ga---~-~v~~~~~~~~~~~~-~~~~ 243 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKR--EDAMKM---GA---D-HYIATLEEGDWGEK-YFDT 243 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTH--HHHHHH---TC---S-EEEEGGGTSCHHHH-SCSC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH--HHHHHc---CC---C-EEEcCcCchHHHHH-hhcC
Confidence 6788999999999863 6777777776543 455555554433 333332 21 1 12221111 22110 1147
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+|+|+-...-. . .. .++...++|+| ||++++.
T Consensus 244 ~D~vid~~g~~--~-~~---~~~~~~~~l~~-~G~iv~~ 275 (360)
T 1piw_A 244 FDLIVVCASSL--T-DI---DFNIMPKAMKV-GGRIVSI 275 (360)
T ss_dssp EEEEEECCSCS--T-TC---CTTTGGGGEEE-EEEEEEC
T ss_pred CCEEEECCCCC--c-HH---HHHHHHHHhcC-CCEEEEe
Confidence 99998643220 0 11 35667889999 9998764
No 363
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=76.81 E-value=4.6 Score=36.76 Aligned_cols=96 Identities=16% Similarity=0.250 Sum_probs=56.0
Q ss_pred cCCCCCC-eEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC-cCCCCCC
Q 019282 177 SHITPNS-HVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD-FTKFGSG 252 (343)
Q Consensus 177 ~~l~~~~-rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d-l~~~~~~ 252 (343)
.+++++. +||=+|+ |.|..+..+++.... .+.+++.+.... +.++++ |. . ..+.....+ .... ..
T Consensus 141 ~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~--~~~~~l---Ga---~-~vi~~~~~~~~~~~-~~ 209 (324)
T 3nx4_A 141 AGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTH--GYLKSL---GA---N-RILSRDEFAESRPL-EK 209 (324)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGH--HHHHHH---TC---S-EEEEGGGSSCCCSS-CC
T ss_pred cccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHH--HHHHhc---CC---C-EEEecCCHHHHHhh-cC
Confidence 4565532 4999987 578888888887654 556666555433 333332 21 1 112221111 1112 23
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+.+|+|+-. .+.+ .++...++|+| +|++++.
T Consensus 210 ~~~d~v~d~-----~g~~----~~~~~~~~l~~-~G~iv~~ 240 (324)
T 3nx4_A 210 QLWAGAIDT-----VGDK----VLAKVLAQMNY-GGCVAAC 240 (324)
T ss_dssp CCEEEEEES-----SCHH----HHHHHHHTEEE-EEEEEEC
T ss_pred CCccEEEEC-----CCcH----HHHHHHHHHhc-CCEEEEE
Confidence 579988653 3332 68889999999 9999875
No 364
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=76.68 E-value=3.4 Score=38.44 Aligned_cols=101 Identities=19% Similarity=0.165 Sum_probs=56.7
Q ss_pred HHHhcCCCCCCeEEEEc--CCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC
Q 019282 173 LAEASHITPNSHVLEIG--CGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG 250 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIG--CGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~ 250 (343)
+.+...++++.+||-+| .|.|..+..+++..+ ..+.+++.+. ...+.+++. +. . ..+.....++.+..
T Consensus 159 l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~--~~~~~~~~l---Ga---~-~~~~~~~~~~~~~~ 228 (353)
T 4dup_A 159 LFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGST--GKCEACERL---GA---K-RGINYRSEDFAAVI 228 (353)
T ss_dssp HTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSH--HHHHHHHHH---TC---S-EEEETTTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCH--HHHHHHHhc---CC---C-EEEeCCchHHHHHH
Confidence 33446788999999995 346777777777543 2444454444 344444432 11 1 12221111211000
Q ss_pred ---CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 251 ---SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ---~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+.+|+|+.... .. .+....+.|+| ||++++.
T Consensus 229 ~~~~~~g~Dvvid~~g-----~~----~~~~~~~~l~~-~G~iv~~ 264 (353)
T 4dup_A 229 KAETGQGVDIILDMIG-----AA----YFERNIASLAK-DGCLSII 264 (353)
T ss_dssp HHHHSSCEEEEEESCC-----GG----GHHHHHHTEEE-EEEEEEC
T ss_pred HHHhCCCceEEEECCC-----HH----HHHHHHHHhcc-CCEEEEE
Confidence 1346999987533 22 46778899999 9998764
No 365
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=76.58 E-value=16 Score=33.43 Aligned_cols=100 Identities=14% Similarity=0.306 Sum_probs=54.9
Q ss_pred hcCCCCCCeEEEEcCCcC-HHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----CCC
Q 019282 176 ASHITPNSHVLEIGCGTL-RVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----KFG 250 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCGtG-~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~~~ 250 (343)
...++++.+||=+|+|.+ .++..+++......+.+++.+. ...+.+++.. . ...+.....++. +..
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~--~r~~~~~~~G---a----~~~i~~~~~~~~~~v~~~t 228 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQ--DKLNLAKKIG---A----DVTINSGDVNPVDEIKKIT 228 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCH--HHHHHHHHTT---C----SEEEEC-CCCHHHHHHHHT
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcH--HHhhhhhhcC---C----eEEEeCCCCCHHHHhhhhc
Confidence 357889999999999864 4555555555444445555444 4444444322 1 112221122221 111
Q ss_pred CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 251 SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
....+|.++.... .. ..+....+.|++ +|++++.
T Consensus 229 ~g~g~d~~~~~~~-----~~---~~~~~~~~~l~~-~G~~v~~ 262 (348)
T 4eez_A 229 GGLGVQSAIVCAV-----AR---IAFEQAVASLKP-MGKMVAV 262 (348)
T ss_dssp TSSCEEEEEECCS-----CH---HHHHHHHHTEEE-EEEEEEC
T ss_pred CCCCceEEEEecc-----Cc---chhheeheeecC-CceEEEE
Confidence 2234666654321 22 268889999999 9998775
No 366
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=76.36 E-value=3.4 Score=37.75 Aligned_cols=139 Identities=10% Similarity=0.085 Sum_probs=78.3
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc-
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF- 246 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl- 246 (343)
..++.+.. + .+..+||+=+|+|.+++.++. +...++.++.++. ..+.-+++.+. ..+..++..+....
T Consensus 82 ~yf~~l~~---~-n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~--a~~~L~~Nl~~---~~~~~V~~~D~~~~L 150 (283)
T 2oo3_A 82 EYISVIKQ---I-NLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPT--EYNFLLKLPHF---NKKVYVNHTDGVSKL 150 (283)
T ss_dssp HHHHHHHH---H-SSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHH--HHHHHTTSCCT---TSCEEEECSCHHHHH
T ss_pred HHHHHHHH---h-cCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHH--HHHHHHHHhCc---CCcEEEEeCcHHHHH
Confidence 34454543 2 245799999999999998876 2344555555554 33333443322 23455555432221
Q ss_pred CCC-CCCCceeEEEEccccccCCchHHHHHHHHHHh--ccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 247 TKF-GSGVVYDLIYASAVFLHMPDKLVWVGLERLAS--KLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 247 ~~~-~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r--~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
... ++..+||+|+.---++.-.+ ...+++.+.+ .+.| +|.+++=.+... +-..+.+.+.|++.|.+....+
T Consensus 151 ~~l~~~~~~fdLVfiDPPYe~k~~--~~~vl~~L~~~~~r~~-~Gi~v~WYPi~~--~~~~~~~~~~l~~~~~~~l~~e 224 (283)
T 2oo3_A 151 NALLPPPEKRGLIFIDPSYERKEE--YKEIPYAIKNAYSKFS-TGLYCVWYPVVN--KAWTEQFLRKMREISSKSVRIE 224 (283)
T ss_dssp HHHCSCTTSCEEEEECCCCCSTTH--HHHHHHHHHHHHHHCT-TSEEEEEEEESS--HHHHHHHHHHHHHHCSSEEEEE
T ss_pred HHhcCCCCCccEEEECCCCCCCcH--HHHHHHHHHHhCccCC-CeEEEEEEeccc--hHHHHHHHHHHHhcCCCeEEEE
Confidence 111 22357999999877753222 3336666655 5568 898876432111 1125667777877787554443
No 367
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=76.27 E-value=12 Score=34.47 Aligned_cols=102 Identities=11% Similarity=0.105 Sum_probs=56.4
Q ss_pred HHHhcCCCCC--CeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC-
Q 019282 173 LAEASHITPN--SHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT- 247 (343)
Q Consensus 173 l~~~~~l~~~--~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~- 247 (343)
+.+...++++ .+||-.|+ |.|..+..+++..+...+.+++.+. ...+..++. .+. . ..+.....++.
T Consensus 150 l~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~--~~~~~~~~~--~g~---~-~~~d~~~~~~~~ 221 (357)
T 2zb4_A 150 IQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH--EKCILLTSE--LGF---D-AAINYKKDNVAE 221 (357)
T ss_dssp HHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH--HHHHHHHHT--SCC---S-EEEETTTSCHHH
T ss_pred HHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH--HHHHHHHHH--cCC---c-eEEecCchHHHH
Confidence 4345678899 99999997 4566666666654322444555443 333322220 111 1 12221111111
Q ss_pred ---CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 ---KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 ---~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+. ..+.+|+|+.+.. . ..++...++|++ ||++++.
T Consensus 222 ~~~~~-~~~~~d~vi~~~G-----~----~~~~~~~~~l~~-~G~iv~~ 259 (357)
T 2zb4_A 222 QLRES-CPAGVDVYFDNVG-----G----NISDTVISQMNE-NSHIILC 259 (357)
T ss_dssp HHHHH-CTTCEEEEEESCC-----H----HHHHHHHHTEEE-EEEEEEC
T ss_pred HHHHh-cCCCCCEEEECCC-----H----HHHHHHHHHhcc-CcEEEEE
Confidence 01 1126999987543 1 267889999999 9999765
No 368
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=75.65 E-value=35 Score=31.45 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=63.7
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--CCCceeEEE
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG--SGVVYDLIY 259 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~--~~~~fDlIv 259 (343)
+.++||+.||.|.++..+... +...+..+++|+.....-..+ .. . .. .+ |..++. .-..+|+|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N-~~-----~-~~---~~---Di~~~~~~~~~~~D~l~ 76 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMN-FG-----E-KP---EG---DITQVNEKTIPDHDILC 76 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHH-HS-----C-CC---BS---CGGGSCGGGSCCCSEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHH-cC-----C-CC---cC---CHHHcCHhhCCCCCEEE
Confidence 468999999999999988773 222234556665443333221 11 1 11 12 222221 112589999
Q ss_pred EccccccCC---------ch--HHHHHHHHHHhccCCCCcEEEEEeccccccCC---CHHHHHHHHHhcCCcEEE
Q 019282 260 ASAVFLHMP---------DK--LVWVGLERLASKLRPYDGRIFVSHNIKFCSRL---GGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 260 s~~v~~hl~---------~~--~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~---~~~~l~~~L~~aGf~~v~ 320 (343)
...-...+. ++ .+.-.+-++.+.++| -.+++..-....... .-+.+.+.|++.||.+..
T Consensus 77 ~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P--~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 77 AGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKP--KVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp EECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCC--SEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEE
T ss_pred ECCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccC--cEEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEE
Confidence 753332221 11 111123345556788 455555322222211 156788888999997543
No 369
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=75.41 E-value=28 Score=32.10 Aligned_cols=125 Identities=13% Similarity=0.038 Sum_probs=66.1
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcC-CCce-EEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCC----CCce
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLN-PENF-HCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGS----GVVY 255 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~-~~~~-~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~----~~~f 255 (343)
..+++|+-||.|.+...+...-- ...+ .++++|+.....-.++ . .. . .+. .|+.++.. ...+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N-~-----~~-~--~~~---~DI~~~~~~~i~~~~~ 77 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKN-F-----KE-E--VQV---KNLDSISIKQIESLNC 77 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHH-H-----CC-C--CBC---CCTTTCCHHHHHHTCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHH-C-----CC-C--ccc---CChhhcCHHHhccCCC
Confidence 46899999999999998877311 1223 4566666544333221 1 11 1 111 23333321 1258
Q ss_pred eEEEEccccccC-----------CchHHHHHHHHHHh----cc--CCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcE
Q 019282 256 DLIYASAVFLHM-----------PDKLVWVGLERLAS----KL--RPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEY 318 (343)
Q Consensus 256 DlIvs~~v~~hl-----------~~~~~~~~L~~l~r----~L--kP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~ 318 (343)
|+++...-...+ .++ ....+.++.+ .+ +| -.+++..-..+.....-+.+.+.|++.||.+
T Consensus 78 Dil~ggpPCQ~fs~S~ag~~~~~~d~-r~~L~~~~~r~~i~~~~~~P--~~~~lENV~gl~~~~~~~~i~~~l~~~GY~v 154 (327)
T 3qv2_A 78 NTWFMSPPCQPYNNSIMSKHKDINDP-RAKSVLHLYRDILPYLINKP--KHIFIENVPLFKESLVFKEIYNILIKNQYYI 154 (327)
T ss_dssp CEEEECCCCTTCSHHHHTTTCTTTCG-GGHHHHHHHHTTGGGCSSCC--SEEEEEECGGGGGSHHHHHHHHHHHHTTCEE
T ss_pred CEEEecCCccCcccccCCCCCCCccc-cchhHHHHHHHHHHHhccCC--CEEEEEchhhhcChHHHHHHHHHHHhCCCEE
Confidence 999976543333 122 2224555555 44 56 4455543222222222577888899999986
Q ss_pred EEe
Q 019282 319 IGK 321 (343)
Q Consensus 319 v~~ 321 (343)
...
T Consensus 155 ~~~ 157 (327)
T 3qv2_A 155 KDI 157 (327)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 370
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=75.28 E-value=5.4 Score=37.01 Aligned_cols=99 Identities=18% Similarity=0.118 Sum_probs=54.8
Q ss_pred HhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc----CC
Q 019282 175 EASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF----TK 248 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl----~~ 248 (343)
+...++++.+||-+|+ |.|..+..+++..+ ..+.+++.+.. ..+.+++. +. . ..+.....++ .+
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~--~~~~~~~~---g~---~-~~~~~~~~~~~~~~~~ 225 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQK--KLQMAEKL---GA---A-AGFNYKKEDFSEATLK 225 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHH--HHHHHHHH---TC---S-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHH--HHHHHHHc---CC---c-EEEecCChHHHHHHHH
Confidence 3457888999999984 56666666666543 34445554443 33333332 11 1 1122111111 10
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
......+|+|+....- . .+....++|++ ||++++.
T Consensus 226 ~~~~~~~d~vi~~~G~-----~----~~~~~~~~l~~-~G~iv~~ 260 (354)
T 2j8z_A 226 FTKGAGVNLILDCIGG-----S----YWEKNVNCLAL-DGRWVLY 260 (354)
T ss_dssp HTTTSCEEEEEESSCG-----G----GHHHHHHHEEE-EEEEEEC
T ss_pred HhcCCCceEEEECCCc-----h----HHHHHHHhccC-CCEEEEE
Confidence 1112469999865432 2 36678899999 9998775
No 371
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=75.19 E-value=6.6 Score=35.91 Aligned_cols=99 Identities=22% Similarity=0.252 Sum_probs=55.8
Q ss_pred HhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----C
Q 019282 175 EASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----K 248 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~ 248 (343)
+..+++++.+||-+|+ |.|..+..+++..+ ..+.+++.+. ...+.+++. +. . ..+.....++. +
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~--~~~~~~~~~---g~---~-~~~d~~~~~~~~~i~~ 208 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTE--EKAETARKL---GC---H-HTINYSTQDFAEVVRE 208 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSH--HHHHHHHHH---TC---S-EEEETTTSCHHHHHHH
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCH--HHHHHHHHc---CC---C-EEEECCCHHHHHHHHH
Confidence 3457889999999995 56777777776543 3445555544 333333322 11 1 11221111111 0
Q ss_pred CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
......+|+|+.+.. .. .++.+.++|+| ||++++.
T Consensus 209 ~~~~~~~d~vi~~~g-----~~----~~~~~~~~l~~-~G~iv~~ 243 (333)
T 1wly_A 209 ITGGKGVDVVYDSIG-----KD----TLQKSLDCLRP-RGMCAAY 243 (333)
T ss_dssp HHTTCCEEEEEECSC-----TT----THHHHHHTEEE-EEEEEEC
T ss_pred HhCCCCCeEEEECCc-----HH----HHHHHHHhhcc-CCEEEEE
Confidence 001236999986543 11 57788999999 9998764
No 372
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=74.71 E-value=16 Score=34.37 Aligned_cols=99 Identities=13% Similarity=0.037 Sum_probs=57.4
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYA 260 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs 260 (343)
.+.+||.|+.+.|.++..++.. +.+.+. |.-....+.+......++....+.+.. .+.. ....||+|+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~-ds~~~~~~~~~n~~~~~~~~~~~~~~~----~~~~--~~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIG-DSYISELATRENLRLNGIDESSVKFLD----STAD--YPQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEE-SCHHHHHHHHHHHHHTTCCGGGSEEEE----TTSC--CCSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEE-hHHHHHHHHHHHHHHcCCCccceEecc----cccc--cccCCCEEEE
Confidence 5568999999999999888652 333443 222222333332233344332344442 1221 2467999887
Q ss_pred ccccccCCchHHHHHHHHHHhccCCCCcEEEEEe
Q 019282 261 SAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 261 ~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~ 294 (343)
...- +. ......|..+...|+| |+.+++..
T Consensus 107 ~lpk-~~--~~l~~~L~~l~~~l~~-~~~i~~~g 136 (375)
T 4dcm_A 107 KVPK-TL--ALLEQQLRALRKVVTS-DTRIIAGA 136 (375)
T ss_dssp ECCS-CH--HHHHHHHHHHHTTCCT-TSEEEEEE
T ss_pred EcCC-CH--HHHHHHHHHHHhhCCC-CCEEEEEe
Confidence 3221 22 2334478999999999 99987663
No 373
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=74.50 E-value=5.6 Score=36.69 Aligned_cols=51 Identities=20% Similarity=0.233 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHH
Q 019282 168 DVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAA 221 (343)
Q Consensus 168 ~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a 221 (343)
.+++.+.+.. .+++..|||--||+|..+....+ + ...+.++++++.....+
T Consensus 240 ~l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~-~-gr~~ig~e~~~~~~~~~ 290 (323)
T 1boo_A 240 KLPEFFIRML-TEPDDLVVDIFGGSNTTGLVAER-E-SRKWISFEMKPEYVAAS 290 (323)
T ss_dssp HHHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHH-T-TCEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHH-c-CCCEEEEeCCHHHHHHH
Confidence 4555555433 46788999999999999887766 2 24555666666544444
No 374
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=74.20 E-value=11 Score=34.16 Aligned_cols=96 Identities=13% Similarity=0.120 Sum_probs=56.0
Q ss_pred HhcCCCCCCeEEEEc-CC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC-cCCCCC
Q 019282 175 EASHITPNSHVLEIG-CG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD-FTKFGS 251 (343)
Q Consensus 175 ~~~~l~~~~rVLDIG-CG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d-l~~~~~ 251 (343)
+...++++.+||=+| +| .|..+..+++.... . ++.++... ..+.++++ |. . ..+.....+ +.+.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~--vi~~~~~~-~~~~~~~l---Ga---~-~~i~~~~~~~~~~~-- 212 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-T--VITTASKR-NHAFLKAL---GA---E-QCINYHEEDFLLAI-- 212 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-E--EEEEECHH-HHHHHHHH---TC---S-EEEETTTSCHHHHC--
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-E--EEEEeccc-hHHHHHHc---CC---C-EEEeCCCcchhhhh--
Confidence 557889999999996 44 67888888876543 3 44333222 24444432 22 1 122222222 2211
Q ss_pred CCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 252 GVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 252 ~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
-..+|+|+-. .+.+ .+....++|+| ||+++..
T Consensus 213 ~~g~D~v~d~-----~g~~----~~~~~~~~l~~-~G~iv~~ 244 (321)
T 3tqh_A 213 STPVDAVIDL-----VGGD----VGIQSIDCLKE-TGCIVSV 244 (321)
T ss_dssp CSCEEEEEES-----SCHH----HHHHHGGGEEE-EEEEEEC
T ss_pred ccCCCEEEEC-----CCcH----HHHHHHHhccC-CCEEEEe
Confidence 1468998763 2322 34788999999 9999875
No 375
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=73.75 E-value=6.3 Score=36.37 Aligned_cols=98 Identities=16% Similarity=0.238 Sum_probs=57.2
Q ss_pred HHHhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC--
Q 019282 173 LAEASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK-- 248 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~-- 248 (343)
+.+...++++.+||-+|+ |.|..+..+++.... .+.++ . +....+.+++. +. .. +. ...++.+
T Consensus 142 l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~--~~~~~~~~~~l---Ga---~~--i~-~~~~~~~~~ 208 (343)
T 3gaz_A 142 LVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-A--RGSDLEYVRDL---GA---TP--ID-ASREPEDYA 208 (343)
T ss_dssp HTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-E--CHHHHHHHHHH---TS---EE--EE-TTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-e--CHHHHHHHHHc---CC---CE--ec-cCCCHHHHH
Confidence 334567889999999994 467777777776443 34444 3 33344444432 21 11 22 1222211
Q ss_pred --CCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 --FGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 --~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
......+|+|+-.. +.. .+....++|+| +|++++.
T Consensus 209 ~~~~~~~g~D~vid~~-----g~~----~~~~~~~~l~~-~G~iv~~ 245 (343)
T 3gaz_A 209 AEHTAGQGFDLVYDTL-----GGP----VLDASFSAVKR-FGHVVSC 245 (343)
T ss_dssp HHHHTTSCEEEEEESS-----CTH----HHHHHHHHEEE-EEEEEES
T ss_pred HHHhcCCCceEEEECC-----CcH----HHHHHHHHHhc-CCeEEEE
Confidence 11234799988642 222 67888899999 9999864
No 376
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=73.55 E-value=5.9 Score=37.18 Aligned_cols=100 Identities=20% Similarity=0.137 Sum_probs=56.4
Q ss_pred hcC-CCCCCeEEEEcCC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecc---cCCc----
Q 019282 176 ASH-ITPNSHVLEIGCG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGE---DMDF---- 246 (343)
Q Consensus 176 ~~~-l~~~~rVLDIGCG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~---~~dl---- 246 (343)
..+ ++++.+||-+|+| .|..+..+++...... ++.++.+....+.++++ |. . ..+... ..++
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~--Vi~~~~~~~~~~~~~~l---Ga---~-~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAEN--VIVIAGSPNRLKLAEEI---GA---D-LTLNRRETSVEERRKAI 259 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSE--EEEEESCHHHHHHHHHT---TC---S-EEEETTTSCHHHHHHHH
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCce--EEEEcCCHHHHHHHHHc---CC---c-EEEeccccCcchHHHHH
Confidence 457 8899999999976 4666777777643234 44444444444444432 21 1 112211 1111
Q ss_pred CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 247 TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 ~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+......+|+|+-... ... .++...++|+| ||++++.
T Consensus 260 ~~~~~g~g~Dvvid~~g-----~~~---~~~~~~~~l~~-~G~iv~~ 297 (380)
T 1vj0_A 260 MDITHGRGADFILEATG-----DSR---ALLEGSELLRR-GGFYSVA 297 (380)
T ss_dssp HHHTTTSCEEEEEECSS-----CTT---HHHHHHHHEEE-EEEEEEC
T ss_pred HHHhCCCCCcEEEECCC-----CHH---HHHHHHHHHhc-CCEEEEE
Confidence 11111236999986432 211 57888999999 9998764
No 377
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=73.50 E-value=0.95 Score=42.01 Aligned_cols=97 Identities=16% Similarity=0.181 Sum_probs=54.0
Q ss_pred hcCCCCCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----CCC
Q 019282 176 ASHITPNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----KFG 250 (343)
Q Consensus 176 ~~~l~~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~~~ 250 (343)
..++ ++.+||-+|+|. |..+..+++..+... ++.++.+....+.+++ + . . ..+.....++. +..
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~--Vi~~~~~~~~~~~~~~-----l-a-~-~v~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGP--ILVSDPNPYRLAFARP-----Y-A-D-RLVNPLEEDLLEVVRRVT 228 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCS--EEEECSCHHHHGGGTT-----T-C-S-EEECTTTSCHHHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCE--EEEECCCHHHHHHHHH-----h-H-H-hccCcCccCHHHHHHHhc
Confidence 4567 899999999853 666667776644324 4444444433332222 1 1 1 11211111111 011
Q ss_pred CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 251 SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
...+|+|+-.. +.. ..++...+.|+| +|++++.
T Consensus 229 -~~g~D~vid~~-----g~~---~~~~~~~~~l~~-~G~iv~~ 261 (343)
T 2dq4_A 229 -GSGVEVLLEFS-----GNE---AAIHQGLMALIP-GGEARIL 261 (343)
T ss_dssp -SSCEEEEEECS-----CCH---HHHHHHHHHEEE-EEEEEEC
T ss_pred -CCCCCEEEECC-----CCH---HHHHHHHHHHhc-CCEEEEE
Confidence 24699997643 222 257889999999 9998764
No 378
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=71.74 E-value=24 Score=26.97 Aligned_cols=112 Identities=13% Similarity=0.140 Sum_probs=53.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCCc--eEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC--CCCCceeE
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPEN--FHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF--GSGVVYDL 257 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~~--~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~--~~~~~fDl 257 (343)
+.+|+=+|+ |.++..+++.+...+ +++++.++.. .....+ ..+ ...+.++..+...+ .....+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~--~~~~~~--~~~-----~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDI--CKKASA--EID-----ALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHH--HCS-----SEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHH--HHHHHH--hcC-----cEEEEcCCCCHHHHHHcCcccCCE
Confidence 467888876 667777776653333 4555554432 221111 001 12222221111100 01236898
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEE
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYI 319 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v 319 (343)
|+..- ++......+..+.+.+.+ + .+++... + ....+.+++.|...+
T Consensus 73 vi~~~-----~~~~~~~~~~~~~~~~~~-~-~ii~~~~-------~-~~~~~~l~~~g~~~v 119 (140)
T 1lss_A 73 YIAVT-----GKEEVNLMSSLLAKSYGI-N-KTIARIS-------E-IEYKDVFERLGVDVV 119 (140)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHTTC-C-CEEEECS-------S-TTHHHHHHHTTCSEE
T ss_pred EEEee-----CCchHHHHHHHHHHHcCC-C-EEEEEec-------C-HhHHHHHHHcCCCEE
Confidence 88752 333333355566677887 5 4444321 1 112346778887543
No 379
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=71.19 E-value=2 Score=39.25 Aligned_cols=92 Identities=18% Similarity=0.250 Sum_probs=53.9
Q ss_pred HhcCCCCCCeEEEEcCC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCC
Q 019282 175 EASHITPNSHVLEIGCG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGV 253 (343)
Q Consensus 175 ~~~~l~~~~rVLDIGCG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~ 253 (343)
+...++++.+||=+|+| .|.++..+++..+. .+.+++ +....+.++++. . . ..+. |.... .+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~---~~~~~~~~~~lG---a---~-~v~~----d~~~v--~~ 198 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS---ASLSQALAAKRG---V---R-HLYR----EPSQV--TQ 198 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC---SSCCHHHHHHHT---E---E-EEES----SGGGC--CS
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE---ChhhHHHHHHcC---C---C-EEEc----CHHHh--CC
Confidence 55788999999999996 47777888876543 444444 333344444322 1 1 1111 12222 46
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+|+|+-. .+.. .+....++|+| ||++++.
T Consensus 199 g~Dvv~d~-----~g~~----~~~~~~~~l~~-~G~~v~~ 228 (315)
T 3goh_A 199 KYFAIFDA-----VNSQ----NAAALVPSLKA-NGHIICI 228 (315)
T ss_dssp CEEEEECC----------------TTGGGEEE-EEEEEEE
T ss_pred CccEEEEC-----CCch----hHHHHHHHhcC-CCEEEEE
Confidence 79999753 2222 23567899999 9999875
No 380
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=69.94 E-value=33 Score=34.87 Aligned_cols=136 Identities=13% Similarity=0.137 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcC------CCceEEEEcChhHHHHHHHHhcccCC-------------CCC--------
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLN------PENFHCLERDELSLMAAFRYELPSQG-------------LLH-------- 233 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~------~~~~~vvdid~s~~~~a~a~~~~~~~-------------~~~-------- 233 (343)
+...|+-+|||-=.....+....+ ..+++++++|....+....+.+.+.. ...
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 346799999998777777655322 24788999998877766554432110 000
Q ss_pred -CCcEEEecccCCcCCC----------C--CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEecc----
Q 019282 234 -KRPIIVRGEDMDFTKF----------G--SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNI---- 296 (343)
Q Consensus 234 -~~~~~~~~~~~dl~~~----------~--~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~---- 296 (343)
.+...+.. |+.+. . ..+.--++++-.++.+++......+|+.+.+. | +|.+++....
T Consensus 187 s~~y~~v~~---Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~-~~~~~~~e~~~~~~ 260 (695)
T 2zwa_A 187 TPKYLARPC---DLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--E-NSHFIILEQLIPKG 260 (695)
T ss_dssp CSSEEEEEC---CTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--S-SEEEEEEEECCTTC
T ss_pred CCCeeEEeC---cCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--C-CceEEEEEeecCCC
Confidence 12333332 44321 0 12344567777888999999998999999864 6 6766653210
Q ss_pred ------------------ccc---cCCCHHHHHHHHHhcCCcEEEee
Q 019282 297 ------------------KFC---SRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 297 ------------------~~~---~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
++. ...+.++..++|.++||+.+...
T Consensus 261 ~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~ 307 (695)
T 2zwa_A 261 PFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVG 307 (695)
T ss_dssp TTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEE
T ss_pred CCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCccee
Confidence 000 11137888999999999876544
No 381
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=69.42 E-value=18 Score=29.67 Aligned_cols=112 Identities=16% Similarity=0.149 Sum_probs=53.8
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCC---CceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC---cCCCCCCCce
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNP---ENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD---FTKFGSGVVY 255 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~---~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d---l~~~~~~~~f 255 (343)
+.+|+=+|| |.++..+++.+.. ..+++++.++... ...+. .+. . .+.++..+ +.....-..+
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~--~~~~~---~g~---~--~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAA--QQHRS---EGR---N--VISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHH--HHHHH---TTC---C--EEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHH--HHHHH---CCC---C--EEEcCCCCHHHHHhccCCCCC
Confidence 558998887 5566666665532 3456666655332 22221 121 1 22222111 1111012358
Q ss_pred eEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEE
Q 019282 256 DLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYI 319 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v 319 (343)
|+|+.. .++......+-...+.+.| ++.++.... ..+ ..+.+.+.|-..+
T Consensus 107 d~vi~~-----~~~~~~~~~~~~~~~~~~~-~~~ii~~~~-------~~~-~~~~l~~~G~~~v 156 (183)
T 3c85_A 107 KLVLLA-----MPHHQGNQTALEQLQRRNY-KGQIAAIAE-------YPD-QLEGLLESGVDAA 156 (183)
T ss_dssp CEEEEC-----CSSHHHHHHHHHHHHHTTC-CSEEEEEES-------SHH-HHHHHHHHTCSEE
T ss_pred CEEEEe-----CCChHHHHHHHHHHHHHCC-CCEEEEEEC-------CHH-HHHHHHHcCCCEE
Confidence 888873 2333222233445666777 777765432 122 2345666776543
No 382
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=69.33 E-value=25 Score=32.31 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=55.6
Q ss_pred HHHhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChh-HHHHHHHHhcccCCCCCCCcEEEeccc---CCc
Q 019282 173 LAEASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDEL-SLMAAFRYELPSQGLLHKRPIIVRGED---MDF 246 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s-~~~~a~a~~~~~~~~~~~~~~~~~~~~---~dl 246 (343)
+.....++++.+||=+|+ |.|.++..+++..+...+.+++.+.. ....+.++++ |. . ..+.... .++
T Consensus 159 l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l---Ga---~-~vi~~~~~~~~~~ 231 (357)
T 1zsy_A 159 LMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSL---GA---E-HVITEEELRRPEM 231 (357)
T ss_dssp HHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHT---TC---S-EEEEHHHHHSGGG
T ss_pred HHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhc---CC---c-EEEecCcchHHHH
Confidence 334457889999999996 57888888888764322223333322 1222333332 21 1 1121110 122
Q ss_pred CCCCCC-CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 247 TKFGSG-VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 ~~~~~~-~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+.... +.+|+|+-. .+... +....++|+| ||++++.
T Consensus 232 ~~~~~~~~~~Dvvid~-----~g~~~----~~~~~~~l~~-~G~iv~~ 269 (357)
T 1zsy_A 232 KNFFKDMPQPRLALNC-----VGGKS----STELLRQLAR-GGTMVTY 269 (357)
T ss_dssp GGTTSSSCCCSEEEES-----SCHHH----HHHHHTTSCT-TCEEEEC
T ss_pred HHHHhCCCCceEEEEC-----CCcHH----HHHHHHhhCC-CCEEEEE
Confidence 212111 248988753 33332 3457899999 9999775
No 383
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=68.21 E-value=5.4 Score=36.40 Aligned_cols=96 Identities=18% Similarity=0.245 Sum_probs=54.1
Q ss_pred cCCCCCC-eEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC---CcCCCC
Q 019282 177 SHITPNS-HVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM---DFTKFG 250 (343)
Q Consensus 177 ~~l~~~~-rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~---dl~~~~ 250 (343)
.+++++. +||-+|+ |.|..+..+++... ..+.+++.+.... +.++++ |. . ..+..... .....
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~--~~~~~l---Ga---~-~~i~~~~~~~~~~~~~- 212 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEH--DYLRVL---GA---K-EVLAREDVMAERIRPL- 212 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCH--HHHHHT---TC---S-EEEECC---------C-
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHH--HHHHHc---CC---c-EEEecCCcHHHHHHHh-
Confidence 5677775 8999997 56778888887655 3455555544332 333332 11 1 11111111 01111
Q ss_pred CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 251 SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+.+|+|+-.. +.. .+....++|++ ||++++.
T Consensus 213 ~~~~~d~vid~~-----g~~----~~~~~~~~l~~-~G~~v~~ 245 (328)
T 1xa0_A 213 DKQRWAAAVDPV-----GGR----TLATVLSRMRY-GGAVAVS 245 (328)
T ss_dssp CSCCEEEEEECS-----TTT----THHHHHHTEEE-EEEEEEC
T ss_pred cCCcccEEEECC-----cHH----HHHHHHHhhcc-CCEEEEE
Confidence 134699987642 222 46778899999 9998765
No 384
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=67.99 E-value=7.8 Score=35.92 Aligned_cols=100 Identities=17% Similarity=0.123 Sum_probs=53.4
Q ss_pred cCCCCC------CeEEEEcCCc-CHHH-HHHH-HHcCCCceEEEEcChh-HHHHHHHHhcccCCCCCCCcEEEecccCCc
Q 019282 177 SHITPN------SHVLEIGCGT-LRVG-VHFI-RYLNPENFHCLERDEL-SLMAAFRYELPSQGLLHKRPIIVRGEDMDF 246 (343)
Q Consensus 177 ~~l~~~------~rVLDIGCGt-G~~a-~~la-~~~~~~~~~vvdid~s-~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl 246 (343)
..++++ .+||-+|+|. |.++ ..++ +..+...+.+++.+.. ....+.++++ |. . .+.....++
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l---Ga---~--~v~~~~~~~ 233 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL---DA---T--YVDSRQTPV 233 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT---TC---E--EEETTTSCG
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc---CC---c--ccCCCccCH
Confidence 456678 8999999853 5555 6666 5443222556665543 0023333332 11 0 111111122
Q ss_pred CCCC-CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 247 TKFG-SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 ~~~~-~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+.. ..+.+|+|+-. .+.. ..++.+.++|+| ||++++.
T Consensus 234 ~~i~~~~gg~Dvvid~-----~g~~---~~~~~~~~~l~~-~G~iv~~ 272 (357)
T 2b5w_A 234 EDVPDVYEQMDFIYEA-----TGFP---KHAIQSVQALAP-NGVGALL 272 (357)
T ss_dssp GGHHHHSCCEEEEEEC-----SCCH---HHHHHHHHHEEE-EEEEEEC
T ss_pred HHHHHhCCCCCEEEEC-----CCCh---HHHHHHHHHHhc-CCEEEEE
Confidence 1100 01379999753 2322 157889999999 9998775
No 385
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=67.85 E-value=22 Score=31.10 Aligned_cols=95 Identities=8% Similarity=-0.100 Sum_probs=53.6
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEcc
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASA 262 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~ 262 (343)
++||=.| + |.++.++++.+-..++.++.++.+......... ..+..+.++..+ +. -..+|.|+...
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d---~~-~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEE---PS-LDGVTHLLIST 71 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSC---CC-CTTCCEEEECC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccc---cc-cCCCCEEEECC
Confidence 5899999 4 999999998885555555555443322211111 134455543333 32 35789999877
Q ss_pred ccccCCchHHHHHHHHHHhccCCCCcEEEE
Q 019282 263 VFLHMPDKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 263 v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
......++....+++.+.+.-.. -++++.
T Consensus 72 ~~~~~~~~~~~~l~~a~~~~~~~-~~~~v~ 100 (286)
T 3ius_A 72 APDSGGDPVLAALGDQIAARAAQ-FRWVGY 100 (286)
T ss_dssp CCBTTBCHHHHHHHHHHHHTGGG-CSEEEE
T ss_pred CccccccHHHHHHHHHHHhhcCC-ceEEEE
Confidence 66554455444556655553222 245544
No 386
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=66.83 E-value=5.7 Score=38.32 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=55.6
Q ss_pred cCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCc--------
Q 019282 177 SHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDF-------- 246 (343)
Q Consensus 177 ~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl-------- 246 (343)
..++++.+||=+|+ |.|.++..+++..+ ..++.++.+....+.++++ |. . ..+.....++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G---a~vi~~~~~~~~~~~~~~l---Ga---~-~vi~~~~~d~~~~~~~~~ 293 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG---ANPICVVSSPQKAEICRAM---GA---E-AIIDRNAEGYRFWKDENT 293 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHH---TC---C-EEEETTTTTCCSEEETTE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC---CeEEEEECCHHHHHHHHhh---CC---c-EEEecCcCcccccccccc
Confidence 46789999999997 46777777777643 3333333444444444442 21 1 1121111111
Q ss_pred -------------CCCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 247 -------------TKFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 247 -------------~~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+......+|+|+-. .+. ..+....++|+| ||++++.
T Consensus 294 ~~~~~~~~~~~~i~~~t~g~g~Dvvid~-----~G~----~~~~~~~~~l~~-~G~iv~~ 343 (456)
T 3krt_A 294 QDPKEWKRFGKRIRELTGGEDIDIVFEH-----PGR----ETFGASVFVTRK-GGTITTC 343 (456)
T ss_dssp ECHHHHHHHHHHHHHHHTSCCEEEEEEC-----SCH----HHHHHHHHHEEE-EEEEEES
T ss_pred cchHHHHHHHHHHHHHhCCCCCcEEEEc-----CCc----hhHHHHHHHhhC-CcEEEEE
Confidence 000012479998763 232 167888999999 9999874
No 387
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=63.87 E-value=17 Score=34.82 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=51.4
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCC--CceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--CCCceeE
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNP--ENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG--SGVVYDL 257 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~--~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~--~~~~fDl 257 (343)
+.+|+=+|+ |+++..+++.+.. ..++++|.|+.. ....+. .+. .+ +.++..+..-+. .-...|+
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~--v~~~~~---~g~---~v--i~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDH--IETLRK---FGM---KV--FYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHH--HHHHHH---TTC---CC--EESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHH--HHHHHh---CCC---eE--EEcCCCCHHHHHhcCCCccCE
Confidence 457888876 6677777776643 345566666544 332222 122 22 333333321110 1246788
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
|++. ++++.....+....+.+.| +..++..
T Consensus 72 viv~-----~~~~~~n~~i~~~ar~~~p-~~~Iiar 101 (413)
T 3l9w_A 72 LINA-----IDDPQTNLQLTEMVKEHFP-HLQIIAR 101 (413)
T ss_dssp EEEC-----CSSHHHHHHHHHHHHHHCT-TCEEEEE
T ss_pred EEEC-----CCChHHHHHHHHHHHHhCC-CCeEEEE
Confidence 8774 3444444466777888888 7676654
No 388
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=63.57 E-value=23 Score=32.84 Aligned_cols=93 Identities=10% Similarity=0.014 Sum_probs=53.1
Q ss_pred CCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC----CCCCCC
Q 019282 180 TPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT----KFGSGV 253 (343)
Q Consensus 180 ~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~----~~~~~~ 253 (343)
.++.+||=+|+ |.|..+..+++.... .+.++. +. ...+.++++ |. ...+.....++. +. .++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~--~~~~~~~~l---Ga----~~vi~~~~~~~~~~v~~~-t~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SP--HNFDLAKSR---GA----EEVFDYRAPNLAQTIRTY-TKN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CG--GGHHHHHHT---TC----SEEEETTSTTHHHHHHHH-TTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CH--HHHHHHHHc---CC----cEEEECCCchHHHHHHHH-ccC
Confidence 78899999998 378888888886543 343432 33 333344432 21 112222222221 11 124
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhcc-CCCCcEEEEE
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKL-RPYDGRIFVS 293 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~L-kP~GG~lvi~ 293 (343)
.+|+|+-. ++... .++...+.| ++ ||++++.
T Consensus 231 ~~d~v~d~-----~g~~~---~~~~~~~~l~~~-~G~iv~~ 262 (371)
T 3gqv_A 231 NLRYALDC-----ITNVE---STTFCFAAIGRA-GGHYVSL 262 (371)
T ss_dssp CCCEEEES-----SCSHH---HHHHHHHHSCTT-CEEEEES
T ss_pred CccEEEEC-----CCchH---HHHHHHHHhhcC-CCEEEEE
Confidence 58998753 33322 577788888 69 9998764
No 389
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=62.68 E-value=9.3 Score=36.58 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=54.6
Q ss_pred cCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCC-----
Q 019282 177 SHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKF----- 249 (343)
Q Consensus 177 ~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~----- 249 (343)
..++++.+||=+|+ |.|..+..+++..+ ..+.+++ .+....+.++++ |. .. .+.....++.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~--~~~~~~~~~~~l---Ga---~~-~i~~~~~~~~~~~~~~~ 285 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVV--SSAQKEAAVRAL---GC---DL-VINRAELGITDDIADDP 285 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEE--SSHHHHHHHHHT---TC---CC-EEEHHHHTCCTTGGGCH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEe--CCHHHHHHHHhc---CC---CE-EEecccccccccccccc
Confidence 57889999999997 45667777777543 2334444 344444444432 22 11 121111121100
Q ss_pred --------------C--CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 250 --------------G--SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 250 --------------~--~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
. ....+|+|+-... .. .++...++|++ ||++++.
T Consensus 286 ~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G-----~~----~~~~~~~~l~~-~G~iv~~ 335 (447)
T 4a0s_A 286 RRVVETGRKLAKLVVEKAGREPDIVFEHTG-----RV----TFGLSVIVARR-GGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCSEEEECSC-----HH----HHHHHHHHSCT-TCEEEES
T ss_pred cccchhhhHHHHHHHHHhCCCceEEEECCC-----ch----HHHHHHHHHhc-CCEEEEE
Confidence 0 1246899876432 21 57788899999 9999875
No 390
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=61.50 E-value=39 Score=28.11 Aligned_cols=100 Identities=17% Similarity=0.019 Sum_probs=51.2
Q ss_pred eEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEccc
Q 019282 184 HVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASAV 263 (343)
Q Consensus 184 rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v 263 (343)
+||=.| |+|.++..+++.+-..++.++.++.+....... . ...+..+.++..+... ..-+.+|+|+....
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~-----~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---L-----GATVATLVKEPLVLTE-ADLDSVDAVVDALS 71 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---T-----CTTSEEEECCGGGCCH-HHHTTCSEEEECCC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc---c-----CCCceEEecccccccH-hhcccCCEEEECCc
Confidence 567666 578888888887744455555554443322211 1 1134455542222211 11245899988765
Q ss_pred cccCC--chHHHHHHHHHHhccCCCCcEEEEE
Q 019282 264 FLHMP--DKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 264 ~~hl~--~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+-+ ..........+.+.++..|+++++.
T Consensus 72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 53211 1112234566666666536666654
No 391
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=60.58 E-value=11 Score=35.14 Aligned_cols=96 Identities=10% Similarity=0.081 Sum_probs=52.8
Q ss_pred CCCCCeEEEEc-C-CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC-CCCCCce
Q 019282 179 ITPNSHVLEIG-C-GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK-FGSGVVY 255 (343)
Q Consensus 179 l~~~~rVLDIG-C-GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~-~~~~~~f 255 (343)
++++.+||=+| + |.|..+..+++..+ ..+.+++ +.. ..+.+++. |. . ..+.....++.+ ......+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~--~~~~~~~l---Ga---~-~v~~~~~~~~~~~~~~~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQD--ASELVRKL---GA---D-DVIDYKSGSVEEQLKSLKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGG--GHHHHHHT---TC---S-EEEETTSSCHHHHHHTSCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChH--HHHHHHHc---CC---C-EEEECCchHHHHHHhhcCCC
Confidence 78899999998 3 46777777777654 3444444 332 23333332 21 1 122211112110 0012468
Q ss_pred eEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 256 DLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 256 DlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
|+|+-.. +.... .+....++|++ ||+++..
T Consensus 250 D~vid~~-----g~~~~--~~~~~~~~l~~-~G~iv~~ 279 (375)
T 2vn8_A 250 DFILDNV-----GGSTE--TWAPDFLKKWS-GATYVTL 279 (375)
T ss_dssp SEEEESS-----CTTHH--HHGGGGBCSSS-CCEEEES
T ss_pred CEEEECC-----CChhh--hhHHHHHhhcC-CcEEEEe
Confidence 9987643 22212 46778899999 9998765
No 392
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=59.82 E-value=8.6 Score=35.74 Aligned_cols=96 Identities=14% Similarity=0.063 Sum_probs=52.6
Q ss_pred hcCCC--C-------CCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcCh---hHHHHHHHHhcccCCCCCCCcEEEecc
Q 019282 176 ASHIT--P-------NSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDE---LSLMAAFRYELPSQGLLHKRPIIVRGE 242 (343)
Q Consensus 176 ~~~l~--~-------~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~---s~~~~a~a~~~~~~~~~~~~~~~~~~~ 242 (343)
...++ + +.+||-+|+|. |..+..+++..+. .+.+++.+. ... +.+++. +. ..+. .
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~--~~~~~~---ga-----~~v~-~ 233 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQ--TVIEET---KT-----NYYN-S 233 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHH--HHHHHH---TC-----EEEE-C
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHH--HHHHHh---CC-----ceec-h
Confidence 35677 7 89999999842 5555555555443 455555544 332 333322 11 1111 1
Q ss_pred cCCcCCCC--CCCceeEEEEccccccCCchHHHHHH-HHHHhccCCCCcEEEEE
Q 019282 243 DMDFTKFG--SGVVYDLIYASAVFLHMPDKLVWVGL-ERLASKLRPYDGRIFVS 293 (343)
Q Consensus 243 ~~dl~~~~--~~~~fDlIvs~~v~~hl~~~~~~~~L-~~l~r~LkP~GG~lvi~ 293 (343)
. ++.+.. ..+.+|+|+..... .. .+ +...+.|+| +|++++.
T Consensus 234 ~-~~~~~~~~~~~~~d~vid~~g~-----~~---~~~~~~~~~l~~-~G~iv~~ 277 (366)
T 2cdc_A 234 S-NGYDKLKDSVGKFDVIIDATGA-----DV---NILGNVIPLLGR-NGVLGLF 277 (366)
T ss_dssp T-TCSHHHHHHHCCEEEEEECCCC-----CT---HHHHHHGGGEEE-EEEEEEC
T ss_pred H-HHHHHHHHhCCCCCEEEECCCC-----hH---HHHHHHHHHHhc-CCEEEEE
Confidence 1 211000 01469999875332 11 45 888999999 9998764
No 393
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=59.39 E-value=22 Score=32.71 Aligned_cols=52 Identities=23% Similarity=0.158 Sum_probs=36.7
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcCh---hHHHHH
Q 019282 167 RDVFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDE---LSLMAA 221 (343)
Q Consensus 167 ~~~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~---s~~~~a 221 (343)
..+++.+.... -.++..|||-=||+|..+...... ...+.++++++ .....+
T Consensus 229 ~~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~ 283 (319)
T 1eg2_A 229 AAVIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQ 283 (319)
T ss_dssp HHHHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHH
Confidence 34556665543 467889999999999998877763 25667777777 555544
No 394
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=59.07 E-value=26 Score=31.74 Aligned_cols=96 Identities=20% Similarity=0.273 Sum_probs=55.7
Q ss_pred cCCCCCC-eEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC---CcCCCC
Q 019282 177 SHITPNS-HVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM---DFTKFG 250 (343)
Q Consensus 177 ~~l~~~~-rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~---dl~~~~ 250 (343)
.+++++. +||-+|+ |.|..+..+++.... .+.+++.+.... +.++++ |. . ..+..... .....
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~--~~~~~l---Ga---~-~v~~~~~~~~~~~~~~- 213 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAA--DYLKQL---GA---S-EVISREDVYDGTLKAL- 213 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTH--HHHHHH---TC---S-EEEEHHHHCSSCCCSS-
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH--HHHHHc---CC---c-EEEECCCchHHHHHHh-
Confidence 4677775 8999997 567777788876653 455666554333 223322 21 1 11211111 11112
Q ss_pred CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 251 SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+.+|+|+-.. +.. .+....++|+| ||++++.
T Consensus 214 ~~~~~d~vid~~-----g~~----~~~~~~~~l~~-~G~iv~~ 246 (330)
T 1tt7_A 214 SKQQWQGAVDPV-----GGK----QLASLLSKIQY-GGSVAVS 246 (330)
T ss_dssp CCCCEEEEEESC-----CTH----HHHHHHTTEEE-EEEEEEC
T ss_pred hcCCccEEEECC-----cHH----HHHHHHHhhcC-CCEEEEE
Confidence 134699987642 332 57889999999 9998764
No 395
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=56.24 E-value=9.9 Score=35.22 Aligned_cols=96 Identities=18% Similarity=0.273 Sum_probs=52.4
Q ss_pred cCCC-CCCeEEEEcCC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHH-hcccCCCCCCCcEEEecccC-CcCCCCCC
Q 019282 177 SHIT-PNSHVLEIGCG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRY-ELPSQGLLHKRPIIVRGEDM-DFTKFGSG 252 (343)
Q Consensus 177 ~~l~-~~~rVLDIGCG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~-~~~~~~~~~~~~~~~~~~~~-dl~~~~~~ 252 (343)
..+. ++.+||=+|+| .|..+..+++... ..+.+++.+... .+.++ ++ |. ..+ +..... .+... .
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~--~~~~~~~l---Ga--~~v--i~~~~~~~~~~~--~ 242 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKK--REEALQDL---GA--DDY--VIGSDQAKMSEL--A 242 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTH--HHHHHTTS---CC--SCE--EETTCHHHHHHS--T
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHH--HHHHHHHc---CC--cee--eccccHHHHHHh--c
Confidence 5677 89999999986 3666666666654 244455544433 33223 22 21 111 111110 11111 2
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+.+|+|+-.-.- .. .++...++|+| ||+++..
T Consensus 243 ~g~D~vid~~g~-----~~---~~~~~~~~l~~-~G~iv~~ 274 (357)
T 2cf5_A 243 DSLDYVIDTVPV-----HH---ALEPYLSLLKL-DGKLILM 274 (357)
T ss_dssp TTEEEEEECCCS-----CC---CSHHHHTTEEE-EEEEEEC
T ss_pred CCCCEEEECCCC-----hH---HHHHHHHHhcc-CCEEEEe
Confidence 369999764321 11 35667889999 9998765
No 396
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=55.89 E-value=71 Score=27.11 Aligned_cols=95 Identities=11% Similarity=0.067 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--CCCceeEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG--SGVVYDLI 258 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~--~~~~fDlI 258 (343)
...+|+=+|+ |.++..+++.+...++ ++.++.++....... . ....+.++..+...+. .-...|.|
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~-----~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR----S-----GANFVHGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----T-----TCEEEESCTTCHHHHHHTTCTTCSEE
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----c-----CCeEEEcCCCCHHHHHhcCcchhcEE
Confidence 4568988887 6889999998877776 777776554433221 1 2334544333221110 12467888
Q ss_pred EEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 259 YASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
++. .+++.....+....+.+.| +..++..
T Consensus 76 i~~-----~~~d~~n~~~~~~a~~~~~-~~~iia~ 104 (234)
T 2aef_A 76 IVD-----LESDSETIHCILGIRKIDE-SVRIIAE 104 (234)
T ss_dssp EEC-----CSCHHHHHHHHHHHHHHCS-SSEEEEE
T ss_pred EEc-----CCCcHHHHHHHHHHHHHCC-CCeEEEE
Confidence 874 3444333355666777888 6676654
No 397
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=54.30 E-value=33 Score=31.76 Aligned_cols=126 Identities=11% Similarity=0.051 Sum_probs=63.8
Q ss_pred CeEEEEcCCcCHHHHHHHHHcC-CCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC----CCCceeE
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLN-PENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG----SGVVYDL 257 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~-~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~----~~~~fDl 257 (343)
.+++|+-||.|.+...+...-- ...+..+++|+.....-.+ . ... ...+.+ |..++. ....+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~-N-----~~~--~~~~~~---DI~~~~~~~~~~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKH-N-----FPE--TNLLNR---NIQQLTPQVIKKWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHH-H-----CTT--SCEECC---CGGGCCHHHHHHTTCCE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHH-h-----CCC--Cceecc---ccccCCHHHhccCCCCE
Confidence 4799999999999998877421 1123455566544332211 1 111 112222 332221 1125899
Q ss_pred EEEccccccC---------CchH--HHHHHHHHHhccC-CCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEe
Q 019282 258 IYASAVFLHM---------PDKL--VWVGLERLASKLR-PYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 258 Ivs~~v~~hl---------~~~~--~~~~L~~l~r~Lk-P~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~ 321 (343)
++...-...+ .++. ..-.+-++.+.++ | -.+++..-..+......+.+.+.|++.||.+...
T Consensus 73 l~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~~~ 146 (333)
T 4h0n_A 73 ILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGFENSTVRNLFIDKLKECNFIYQEF 146 (333)
T ss_dssp EEECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTGGGSHHHHHHHHHHHHTTEEEEEE
T ss_pred EEecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhhhhhhHHHHHHHHHHhCCCeEEEE
Confidence 9875333222 1111 1112334455555 7 4555553222222222578888999999986543
No 398
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=53.86 E-value=45 Score=26.40 Aligned_cols=112 Identities=13% Similarity=0.150 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHHcCCCc--eEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCC---cCCCCCCCc
Q 019282 180 TPNSHVLEIGCGTLRVGVHFIRYLNPEN--FHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMD---FTKFGSGVV 254 (343)
Q Consensus 180 ~~~~rVLDIGCGtG~~a~~la~~~~~~~--~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~d---l~~~~~~~~ 254 (343)
.++.+|+=+|| |.++..+++.+...+ +++++.++.. .. ... . ......+.++..+ +... .-..
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~--~~---~~~-~---~~g~~~~~~d~~~~~~l~~~-~~~~ 84 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYA--FH---RLN-S---EFSGFTVVGDAAEFETLKEC-GMEK 84 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGG--GG---GSC-T---TCCSEEEESCTTSHHHHHTT-TGGG
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHH--HH---HHH-h---cCCCcEEEecCCCHHHHHHc-Cccc
Confidence 45678999987 556666666553333 4455544422 11 111 0 1112233332222 1111 1246
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCc
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLE 317 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~ 317 (343)
+|+|+.. +++......+..+.+.+.| ...++...... . ..+.+++.|..
T Consensus 85 ad~Vi~~-----~~~~~~~~~~~~~~~~~~~-~~~iv~~~~~~-------~-~~~~l~~~G~~ 133 (155)
T 2g1u_A 85 ADMVFAF-----TNDDSTNFFISMNARYMFN-VENVIARVYDP-------E-KIKIFEENGIK 133 (155)
T ss_dssp CSEEEEC-----SSCHHHHHHHHHHHHHTSC-CSEEEEECSSG-------G-GHHHHHTTTCE
T ss_pred CCEEEEE-----eCCcHHHHHHHHHHHHHCC-CCeEEEEECCH-------H-HHHHHHHCCCc
Confidence 8888874 3333333355556666666 66665543211 1 13456677775
No 399
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=53.27 E-value=12 Score=34.79 Aligned_cols=96 Identities=17% Similarity=0.240 Sum_probs=50.8
Q ss_pred cCCC-CCCeEEEEcCCc-CHHHHHHHHHcCCCceEEEEcChhHHHHHHHH-hcccCCCCCCCcEEEecccC-CcCCCCCC
Q 019282 177 SHIT-PNSHVLEIGCGT-LRVGVHFIRYLNPENFHCLERDELSLMAAFRY-ELPSQGLLHKRPIIVRGEDM-DFTKFGSG 252 (343)
Q Consensus 177 ~~l~-~~~rVLDIGCGt-G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~-~~~~~~~~~~~~~~~~~~~~-dl~~~~~~ 252 (343)
..+. ++.+||=+|+|. |..+..+++... ..+.+++.+.... +.+. +. |. . ..+..... .+... .
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~--~~~~~~l---Ga---~-~v~~~~~~~~~~~~--~ 249 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKK--EEALKNF---GA---D-SFLVSRDQEQMQAA--A 249 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGH--HHHHHTS---CC---S-EEEETTCHHHHHHT--T
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHH--HHHHHhc---CC---c-eEEeccCHHHHHHh--h
Confidence 5677 899999999753 555566666543 2444555444332 2222 21 21 1 11211110 11111 2
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+.+|+|+-...... .++...++|++ +|+++..
T Consensus 250 ~~~D~vid~~g~~~--------~~~~~~~~l~~-~G~iv~~ 281 (366)
T 1yqd_A 250 GTLDGIIDTVSAVH--------PLLPLFGLLKS-HGKLILV 281 (366)
T ss_dssp TCEEEEEECCSSCC--------CSHHHHHHEEE-EEEEEEC
T ss_pred CCCCEEEECCCcHH--------HHHHHHHHHhc-CCEEEEE
Confidence 46999986432211 24567788999 9998764
No 400
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=52.45 E-value=19 Score=28.70 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=49.8
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCC--CceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--CCCceeE
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNP--ENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG--SGVVYDL 257 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~--~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~--~~~~fDl 257 (343)
..+|+=+|+ |..+..+++.+.. ..+++++.++.......... ... ....+.++..+...+. .-...|+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~-~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR-LGD-----NADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH-HCT-----TCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh-hcC-----CCeEEEcCCCCHHHHHHcChhhCCE
Confidence 356887765 7788888876643 34555555432211111111 011 2334444333221111 1246788
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
|++. .+++.....+....+.+.| ...++..
T Consensus 75 vi~~-----~~~d~~n~~~~~~a~~~~~-~~~ii~~ 104 (153)
T 1id1_A 75 ILAL-----SDNDADNAFVVLSAKDMSS-DVKTVLA 104 (153)
T ss_dssp EEEC-----SSCHHHHHHHHHHHHHHTS-SSCEEEE
T ss_pred EEEe-----cCChHHHHHHHHHHHHHCC-CCEEEEE
Confidence 8774 3334443356667777877 7777664
No 401
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=51.63 E-value=17 Score=33.40 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=50.4
Q ss_pred HHHhcCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcC---
Q 019282 173 LAEASHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFT--- 247 (343)
Q Consensus 173 l~~~~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~--- 247 (343)
+.+...++++.+||=+|+ |.|..+..+++......+.+++ +. ...+..+ . +. . ..+. ...++.
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~--~~~~~~~-~---ga---~-~~~~-~~~~~~~~~ 201 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-ST--FKHEAIK-D---SV---T-HLFD-RNADYVQEV 201 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CG--GGHHHHG-G---GS---S-EEEE-TTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CH--HHHHHHH-c---CC---c-EEEc-CCccHHHHH
Confidence 444567899999999998 3566666666654333334443 22 1222222 1 21 1 1121 112221
Q ss_pred -CCCCCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 248 -KFGSGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 248 -~~~~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+. ..+.+|+|+-.- +.. .+....++|+| ||++++.
T Consensus 202 ~~~-~~~g~Dvv~d~~-----g~~----~~~~~~~~l~~-~G~~v~~ 237 (349)
T 4a27_A 202 KRI-SAEGVDIVLDCL-----CGD----NTGKGLSLLKP-LGTYILY 237 (349)
T ss_dssp HHH-CTTCEEEEEEEC-----C-----------CTTEEE-EEEEEEE
T ss_pred HHh-cCCCceEEEECC-----Cch----hHHHHHHHhhc-CCEEEEE
Confidence 11 135799998632 222 24678899999 9999865
No 402
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=50.49 E-value=1.4e+02 Score=26.72 Aligned_cols=125 Identities=10% Similarity=0.035 Sum_probs=65.9
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEcc
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASA 262 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~ 262 (343)
.+|||+=||.|.+..-|.++ +-.-+.++++|+.....-.++ .. ...+.++..++..- .-...|+++...
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N------~~---~~~~~~DI~~i~~~-~~~~~D~l~ggp 69 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESN------HS---AKLIKGDISKISSD-EFPKCDGIIGGP 69 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHH------CC---SEEEESCGGGCCGG-GSCCCSEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHH------CC---CCcccCChhhCCHh-hCCcccEEEecC
Confidence 47999999999999988762 222234677777554433221 11 12333322222211 113579888643
Q ss_pred cccc---------CCch--HHHHHHHHHHhccCCCCcEEEEEeccccccCC-C--HHHHHHHHHhcCCcEEE
Q 019282 263 VFLH---------MPDK--LVWVGLERLASKLRPYDGRIFVSHNIKFCSRL-G--GEECTKRLTSLGLEYIG 320 (343)
Q Consensus 263 v~~h---------l~~~--~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~-~--~~~l~~~L~~aGf~~v~ 320 (343)
-... ..++ .+.-.+-++.+.++| -.+++..-..+.... + -+.+.+.|++.||.+..
T Consensus 70 PCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~P--k~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 139 (331)
T 3ubt_Y 70 PSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKP--IFFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHI 139 (331)
T ss_dssp CGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCC--SEEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEE
T ss_pred CCCCcCCCCCccCCCCchhHHHHHHHHHHhccCC--eEEEeeeecccccccccchhhhhhhhhccCCcEEEE
Confidence 2221 1121 121123345666788 455555322232222 2 56778889999997644
No 403
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=50.02 E-value=55 Score=28.16 Aligned_cols=35 Identities=9% Similarity=-0.016 Sum_probs=22.0
Q ss_pred CCCCCeEEEEcCC-cCHHHHHHHHHcCCCceEEEEc
Q 019282 179 ITPNSHVLEIGCG-TLRVGVHFIRYLNPENFHCLER 213 (343)
Q Consensus 179 l~~~~rVLDIGCG-tG~~a~~la~~~~~~~~~vvdi 213 (343)
..++++||=.|++ +|.++..+++.+...++.++-+
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~ 46 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFT 46 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEE
Confidence 3457789988874 4667777777664444444433
No 404
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=49.21 E-value=1e+02 Score=26.74 Aligned_cols=87 Identities=17% Similarity=0.235 Sum_probs=45.5
Q ss_pred eEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEccc
Q 019282 184 HVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASAV 263 (343)
Q Consensus 184 rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v 263 (343)
+|.=||||. ++..++..+...++.++.++.+........+ .+.. .... .+..+. ...|+|+..
T Consensus 2 ~i~iiG~G~--~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~---~g~~---~~~~----~~~~~~---~~~D~vi~a-- 64 (279)
T 2f1k_A 2 KIGVVGLGL--IGASLAGDLRRRGHYLIGVSRQQSTCEKAVE---RQLV---DEAG----QDLSLL---QTAKIIFLC-- 64 (279)
T ss_dssp EEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---TTSC---SEEE----SCGGGG---TTCSEEEEC--
T ss_pred EEEEEcCcH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHh---CCCC---cccc----CCHHHh---CCCCEEEEE--
Confidence 577788754 5555555443234445555554433332222 1221 1111 122222 357888773
Q ss_pred cccCCchHHHHHHHHHHhccCCCCcEEE
Q 019282 264 FLHMPDKLVWVGLERLASKLRPYDGRIF 291 (343)
Q Consensus 264 ~~hl~~~~~~~~L~~l~r~LkP~GG~lv 291 (343)
++......+++++...++| |..++
T Consensus 65 ---v~~~~~~~~~~~l~~~~~~-~~~vv 88 (279)
T 2f1k_A 65 ---TPIQLILPTLEKLIPHLSP-TAIVT 88 (279)
T ss_dssp ---SCHHHHHHHHHHHGGGSCT-TCEEE
T ss_pred ---CCHHHHHHHHHHHHhhCCC-CCEEE
Confidence 5555566688889888988 65443
No 405
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=48.17 E-value=58 Score=29.59 Aligned_cols=89 Identities=19% Similarity=0.228 Sum_probs=47.5
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCce--EEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEE
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENF--HCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYA 260 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~--~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs 260 (343)
.+|.=||+|. ++..++..+...++ .++..|.+....+.+.+ .|... ... .+..+. .-...|+|+.
T Consensus 34 ~kI~IIG~G~--mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~---~G~~~---~~~----~~~~~~-~~~~aDvVil 100 (314)
T 3ggo_A 34 QNVLIVGVGF--MGGSFAKSLRRSGFKGKIYGYDINPESISKAVD---LGIID---EGT----TSIAKV-EDFSPDFVML 100 (314)
T ss_dssp SEEEEESCSH--HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH---TTSCS---EEE----SCTTGG-GGGCCSEEEE
T ss_pred CEEEEEeeCH--HHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH---CCCcc---hhc----CCHHHH-hhccCCEEEE
Confidence 5899998764 55555544433444 55555555544443332 22211 111 122210 1235788876
Q ss_pred ccccccCCchHHHHHHHHHHhccCCCCcEE
Q 019282 261 SAVFLHMPDKLVWVGLERLASKLRPYDGRI 290 (343)
Q Consensus 261 ~~v~~hl~~~~~~~~L~~l~r~LkP~GG~l 290 (343)
. ++......+++++...++| |..+
T Consensus 101 a-----vp~~~~~~vl~~l~~~l~~-~~iv 124 (314)
T 3ggo_A 101 S-----SPVRTFREIAKKLSYILSE-DATV 124 (314)
T ss_dssp C-----SCGGGHHHHHHHHHHHSCT-TCEE
T ss_pred e-----CCHHHHHHHHHHHhhccCC-CcEE
Confidence 3 4555556688999999998 6544
No 406
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=47.63 E-value=8.7 Score=36.25 Aligned_cols=99 Identities=12% Similarity=0.008 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCC--ceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPE--NFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~--~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
++.+|+=+|+ |..+..+++.+... .+.++|.+... .+...+.. +. ..........++.+. -...|+|
T Consensus 167 ~g~~V~ViG~--G~iG~~~a~~a~~~Ga~V~~~d~~~~~--l~~~~~~~--g~---~~~~~~~~~~~l~~~--l~~aDvV 235 (377)
T 2vhw_A 167 EPADVVVIGA--GTAGYNAARIANGMGATVTVLDINIDK--LRQLDAEF--CG---RIHTRYSSAYELEGA--VKRADLV 235 (377)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHT--TT---SSEEEECCHHHHHHH--HHHCSEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCHHH--HHHHHHhc--CC---eeEeccCCHHHHHHH--HcCCCEE
Confidence 4679999998 45555555443223 44455554433 22222211 11 111111001112111 1357999
Q ss_pred EEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 259 YASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+..-.......+.. +.++..+.+|| ||+++..
T Consensus 236 i~~~~~p~~~t~~l--i~~~~l~~mk~-g~~iV~v 267 (377)
T 2vhw_A 236 IGAVLVPGAKAPKL--VSNSLVAHMKP-GAVLVDI 267 (377)
T ss_dssp EECCCCTTSCCCCC--BCHHHHTTSCT-TCEEEEG
T ss_pred EECCCcCCCCCcce--ecHHHHhcCCC-CcEEEEE
Confidence 87432211111111 24567788999 9887654
No 407
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=47.17 E-value=12 Score=30.20 Aligned_cols=57 Identities=18% Similarity=0.147 Sum_probs=35.4
Q ss_pred CCCceeEEEEccccc-c-CCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 251 SGVVYDLIYASAVFL-H-MPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~-h-l~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
+++.||.|+...--. . ..-+ ..++..+++.||| ||.|.. ... .....+-=+||.++.
T Consensus 56 p~stYD~V~~lt~~~~~~~~l~--r~li~~l~~aLkp-gG~L~g---------l~~-~~~~EailaGfvv~~ 114 (136)
T 2km1_A 56 ENAKYETVHYLTPEAQTDIKFP--KKLISVLADSLKP-NGSLIG---------LSD-IYKVDALINGFEIIN 114 (136)
T ss_dssp CSSSCCSEEEECCCSSCSCCCC--HHHHHHHHTTCCT-TCCEEC---------CCH-HHHHHHHHHTEEEEC
T ss_pred CcccccEEEEecCCccchhhcC--HHHHHHHHHHhCC-CCEEEe---------cCc-chhhHHHhhccEecc
Confidence 467999998743222 1 1111 3489999999999 999965 111 122233348998765
No 408
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=43.38 E-value=51 Score=30.72 Aligned_cols=117 Identities=17% Similarity=0.264 Sum_probs=61.5
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC-CCCceeEEEE
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG-SGVVYDLIYA 260 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~-~~~~fDlIvs 260 (343)
..+|.=||+| .++..++..+...++.++..|.+....+...+ .+... . .++.+.. .....|+|+.
T Consensus 22 ~mkIgiIGlG--~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~---~g~~~-----~----~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 22 SMQIGMIGLG--RMGADMVRRLRKGGHECVVYDLNVNAVQALER---EGIAG-----A----RSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT---TTCBC-----C----SSHHHHHHHSCSSCEEEE
T ss_pred CCEEEEECch--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH---CCCEE-----e----CCHHHHHhcCCCCCEEEE
Confidence 4688888875 46666665554455556666655443332221 12210 0 1111110 1123488876
Q ss_pred ccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEe
Q 019282 261 SAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 261 ~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~ 321 (343)
. ++......+++.+...|+| | .+++....... -...++.+.+.+.|...+..
T Consensus 88 ~-----vp~~~v~~vl~~l~~~l~~-g-~iiId~st~~~--~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 88 M-----VPAAVVDSMLQRMTPLLAA-N-DIVIDGGNSHY--QDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp C-----SCGGGHHHHHHHHGGGCCT-T-CEEEECSSCCH--HHHHHHHHHHHTTTCEEEEE
T ss_pred e-----CCHHHHHHHHHHHHhhCCC-C-CEEEeCCCCCh--HHHHHHHHHHHHCCCEEEeC
Confidence 3 3444555688999999998 5 45554221110 01345666777888876654
No 409
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=42.91 E-value=89 Score=23.59 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=20.6
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCC--CceEEEEcCh
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNP--ENFHCLERDE 215 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~--~~~~vvdid~ 215 (343)
..+|+=+|+ |.++..+++.+.. ..+++++.+.
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457999987 6677777766532 3455666554
No 410
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=42.74 E-value=78 Score=28.64 Aligned_cols=94 Identities=11% Similarity=0.077 Sum_probs=54.1
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--CCCceeEEE
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG--SGVVYDLIY 259 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~--~~~~fDlIv 259 (343)
..+|+=+|+ |..+..+++.+...+. ++-+|.++.... .+. . ....+.++..+...+. .-...|.|+
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~---~-----~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR---S-----GANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH---T-----TCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh---C-----CcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 457888775 7889999988866666 666666554444 322 1 2345555443322111 124688888
Q ss_pred EccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 260 ASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 260 s~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+. .+++...-......+.+.| ...++..
T Consensus 183 ~~-----~~~d~~n~~~~~~ar~~~~-~~~iiar 210 (336)
T 1lnq_A 183 VD-----LESDSETIHCILGIRKIDE-SVRIIAE 210 (336)
T ss_dssp EC-----CSSHHHHHHHHHHHHTTCT-TSEEEEE
T ss_pred Ec-----CCccHHHHHHHHHHHHHCC-CCeEEEE
Confidence 74 2344333345566777888 7676654
No 411
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=42.51 E-value=1.4e+02 Score=25.54 Aligned_cols=106 Identities=15% Similarity=0.089 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCcC-HHHHHHHHHcCCCceE--EEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC-------
Q 019282 181 PNSHVLEIGCGTL-RVGVHFIRYLNPENFH--CLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG------- 250 (343)
Q Consensus 181 ~~~rVLDIGCGtG-~~a~~la~~~~~~~~~--vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~------- 250 (343)
.++++|=.|++.+ .++..+++.+...++. +++.+....... .+.... .....+..+.. |+.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~-~~~~~~~~~~~---D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV--HELAGT-LDRNDSIILPC---DVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH--HHHHHT-SSSCCCEEEEC---CCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHH--HHHHHh-cCCCCceEEeC---CCCCHHHHHHHHH
Confidence 3568888887632 3455555555334444 444443221111 111111 11124455544 433221
Q ss_pred ----CCCceeEEEEcccccc----------CCchHHH-----------HHHHHHHhccCCCCcEEEEE
Q 019282 251 ----SGVVYDLIYASAVFLH----------MPDKLVW-----------VGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ----~~~~fDlIvs~~v~~h----------l~~~~~~-----------~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+..|+++.+..+.. .....+. .+++.+...+++ +|.++..
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~i 146 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-GGSIVTL 146 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-CEEEEEE
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CceEEEE
Confidence 0136899888765432 2222221 245667788888 8988765
No 412
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=41.49 E-value=11 Score=35.24 Aligned_cols=98 Identities=13% Similarity=0.101 Sum_probs=45.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCC--ceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEE
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPE--NFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIY 259 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~--~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIv 259 (343)
+.+|+=+|+ |..+..+++.+... .+.++|.+... .+...+. .+. .......+..++.+. -..+|+|+
T Consensus 166 ~~~V~ViGa--G~iG~~~a~~l~~~Ga~V~~~d~~~~~--~~~~~~~--~g~---~~~~~~~~~~~l~~~--~~~~DvVi 234 (369)
T 2eez_A 166 PASVVILGG--GTVGTNAAKIALGMGAQVTILDVNHKR--LQYLDDV--FGG---RVITLTATEANIKKS--VQHADLLI 234 (369)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHH--TTT---SEEEEECCHHHHHHH--HHHCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCEEEEEECCHHH--HHHHHHh--cCc---eEEEecCCHHHHHHH--HhCCCEEE
Confidence 578999998 55666655544333 44555555433 2222210 111 111110001111111 13589998
Q ss_pred EccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 260 ASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 260 s~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..........+.. +.++..+.+|| ||+++..
T Consensus 235 ~~~g~~~~~~~~l--i~~~~l~~mk~-gg~iV~v 265 (369)
T 2eez_A 235 GAVLVPGAKAPKL--VTRDMLSLMKE-GAVIVDV 265 (369)
T ss_dssp ECCC-------CC--SCHHHHTTSCT-TCEEEEC
T ss_pred ECCCCCccccchh--HHHHHHHhhcC-CCEEEEE
Confidence 7543321001111 24667788999 9987643
No 413
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=41.40 E-value=23 Score=32.39 Aligned_cols=75 Identities=15% Similarity=0.175 Sum_probs=40.5
Q ss_pred CCcCCCCCCCceeEEEEcccc----ccCC---ch--HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhc
Q 019282 244 MDFTKFGSGVVYDLIYASAVF----LHMP---DK--LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSL 314 (343)
Q Consensus 244 ~dl~~~~~~~~fDlIvs~~v~----~hl~---~~--~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~a 314 (343)
.||......+.||+|++...- ||.. |. ...-.++...++|+| ||.+++-.- . ..+...+++...| +.
T Consensus 196 lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkP-GGtfV~Kvy-g-gaDr~se~lv~~L-aR 271 (320)
T 2hwk_A 196 LDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNP-GGTCVSIGY-G-YADRASESIIGAI-AR 271 (320)
T ss_dssp GGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEE-EEEEEEEEC-C-CCSHHHHHHHHHH-HT
T ss_pred cccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCC-CceEEEEEe-c-CCcccHHHHHHHH-HH
Confidence 355433333679999996443 4411 11 111256777899999 999987631 0 0000134454444 35
Q ss_pred CCcEEEee
Q 019282 315 GLEYIGKK 322 (343)
Q Consensus 315 Gf~~v~~~ 322 (343)
-|+.+...
T Consensus 272 ~F~~Vr~v 279 (320)
T 2hwk_A 272 QFKFSRVC 279 (320)
T ss_dssp TEEEEEEE
T ss_pred hcceeeee
Confidence 57666544
No 414
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=40.21 E-value=1.4e+02 Score=26.82 Aligned_cols=112 Identities=13% Similarity=0.051 Sum_probs=57.3
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCc-eEEEEcChhH-------HHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCc
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPEN-FHCLERDELS-------LMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVV 254 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~-~~vvdid~s~-------~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~ 254 (343)
.+|-=||+| .++..++..+...+ +.++..|.+. ...+.. ...+. .. .+..+. -..
T Consensus 25 m~IgvIG~G--~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~---~~~g~-------~~---~s~~e~--~~~ 87 (317)
T 4ezb_A 25 TTIAFIGFG--EAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARA---AELGV-------EP---LDDVAG--IAC 87 (317)
T ss_dssp CEEEEECCS--HHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHH---HHTTC-------EE---ESSGGG--GGG
T ss_pred CeEEEECcc--HHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHH---HHCCC-------CC---CCHHHH--Hhc
Confidence 578888875 46666666554455 5555555543 111111 11121 11 011111 135
Q ss_pred eeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 255 YDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 255 fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
.|+|+. .++.......++.+...++| |. +++.... ...-....+.+.+++.|...+.
T Consensus 88 aDvVi~-----avp~~~~~~~~~~i~~~l~~-~~-ivv~~st--~~p~~~~~~~~~l~~~g~~~~d 144 (317)
T 4ezb_A 88 ADVVLS-----LVVGAATKAVAASAAPHLSD-EA-VFIDLNS--VGPDTKALAAGAIATGKGSFVE 144 (317)
T ss_dssp CSEEEE-----CCCGGGHHHHHHHHGGGCCT-TC-EEEECCS--CCHHHHHHHHHHHHTSSCEEEE
T ss_pred CCEEEE-----ecCCHHHHHHHHHHHhhcCC-CC-EEEECCC--CCHHHHHHHHHHHHHcCCeEEe
Confidence 688876 35555445567888999998 54 4444210 0000145566667777766554
No 415
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=38.96 E-value=36 Score=28.74 Aligned_cols=93 Identities=14% Similarity=0.070 Sum_probs=47.7
Q ss_pred eEEEEcCCcCHHHHHHHHHcCC--CceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--CCCceeEEE
Q 019282 184 HVLEIGCGTLRVGVHFIRYLNP--ENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG--SGVVYDLIY 259 (343)
Q Consensus 184 rVLDIGCGtG~~a~~la~~~~~--~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~--~~~~fDlIv 259 (343)
+|+=+|+ |.++..+++.+.. ..+++++.++...... ++. . ....+.++..+...+. .-...|+|+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l-~~~---~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEF-AKK---L-----KATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-HHH---S-----SSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH-HHH---c-----CCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 4666665 7788888877643 3455666555332221 111 1 1233444333321111 124678888
Q ss_pred EccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 260 ASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 260 s~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+. .+++.....+....+.+.| ...++..
T Consensus 71 ~~-----~~~d~~n~~~~~~a~~~~~-~~~iia~ 98 (218)
T 3l4b_C 71 IL-----TPRDEVNLFIAQLVMKDFG-VKRVVSL 98 (218)
T ss_dssp EC-----CSCHHHHHHHHHHHHHTSC-CCEEEEC
T ss_pred Ee-----cCCcHHHHHHHHHHHHHcC-CCeEEEE
Confidence 74 3444444466666776666 6666543
No 416
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=38.57 E-value=20 Score=35.21 Aligned_cols=90 Identities=10% Similarity=0.004 Sum_probs=47.6
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEE
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLI 258 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlI 258 (343)
..++.+|+=+|+| ..+..+++.+...+..++.+|.++.....+.+. |. . . .++.+. -...|+|
T Consensus 271 ~l~GktV~IiG~G--~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~---Ga---~--~-----~~l~e~--l~~aDvV 333 (494)
T 3ce6_A 271 LIGGKKVLICGYG--DVGKGCAEAMKGQGARVSVTEIDPINALQAMME---GF---D--V-----VTVEEA--IGDADIV 333 (494)
T ss_dssp CCTTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT---TC---E--E-----CCHHHH--GGGCSEE
T ss_pred CCCcCEEEEEccC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc---CC---E--E-----ecHHHH--HhCCCEE
Confidence 5678999999985 455555554433344555555544443333321 22 1 1 122111 1367998
Q ss_pred EEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 259 YASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 259 vs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+..-.-.++-. .+..+.+|| ||+++..
T Consensus 334 i~atgt~~~i~-------~~~l~~mk~-ggilvnv 360 (494)
T 3ce6_A 334 VTATGNKDIIM-------LEHIKAMKD-HAILGNI 360 (494)
T ss_dssp EECSSSSCSBC-------HHHHHHSCT-TCEEEEC
T ss_pred EECCCCHHHHH-------HHHHHhcCC-CcEEEEe
Confidence 87532222211 246677899 9988665
No 417
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=38.25 E-value=14 Score=34.48 Aligned_cols=99 Identities=12% Similarity=0.086 Sum_probs=45.1
Q ss_pred CCeEEEEcCC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEE
Q 019282 182 NSHVLEIGCG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYA 260 (343)
Q Consensus 182 ~~rVLDIGCG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs 260 (343)
+.+||=+|+| .|..+...+...+. .+++++.+....... .+.... ..........++.+. -..+|+|+.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~--~~~~~~-----~~~~~~~~~~~~~~~--~~~~DvVI~ 236 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYL--ETLFGS-----RVELLYSNSAEIETA--VAEADLLIG 236 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH--HHHHGG-----GSEEEECCHHHHHHH--HHTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHH--HHhhCc-----eeEeeeCCHHHHHHH--HcCCCEEEE
Confidence 3799999985 23333333444333 556666655433222 221110 111111100111111 125899986
Q ss_pred ccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 261 SAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 261 ~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.-.......+.. +.+...+.++| ||+++..
T Consensus 237 ~~~~~~~~~~~l--i~~~~~~~~~~-g~~ivdv 266 (361)
T 1pjc_A 237 AVLVPGRRAPIL--VPASLVEQMRT-GSVIVDV 266 (361)
T ss_dssp CCCCTTSSCCCC--BCHHHHTTSCT-TCEEEET
T ss_pred CCCcCCCCCCee--cCHHHHhhCCC-CCEEEEE
Confidence 543322111111 23456788999 9987653
No 418
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=38.07 E-value=1.1e+02 Score=26.66 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=23.3
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEE
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
..|+|+. .++......++.++...++| |..++.
T Consensus 62 ~aDvVil-----avp~~~~~~v~~~l~~~l~~-~~iv~~ 94 (281)
T 2g5c_A 62 SPDFVML-----SSPVRTFREIAKKLSYILSE-DATVTD 94 (281)
T ss_dssp CCSEEEE-----CSCHHHHHHHHHHHHHHSCT-TCEEEE
T ss_pred CCCEEEE-----cCCHHHHHHHHHHHHhhCCC-CcEEEE
Confidence 5788876 45555556688888888998 765543
No 419
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=36.79 E-value=1.1e+02 Score=26.48 Aligned_cols=32 Identities=16% Similarity=0.112 Sum_probs=21.8
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEE
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIF 291 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lv 291 (343)
..|+|+.. +++.....+++++...++| |..++
T Consensus 68 ~~Dvvi~a-----v~~~~~~~v~~~l~~~~~~-~~ivv 99 (266)
T 3d1l_A 68 YAKLYIVS-----LKDSAFAELLQGIVEGKRE-EALMV 99 (266)
T ss_dssp CCSEEEEC-----CCHHHHHHHHHHHHTTCCT-TCEEE
T ss_pred CCCEEEEe-----cCHHHHHHHHHHHHhhcCC-CcEEE
Confidence 57888773 4555555688888888888 54443
No 420
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=36.12 E-value=56 Score=26.03 Aligned_cols=107 Identities=10% Similarity=0.126 Sum_probs=62.6
Q ss_pred CeEEEEcCCc--CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEE
Q 019282 183 SHVLEIGCGT--LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYA 260 (343)
Q Consensus 183 ~rVLDIGCGt--G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs 260 (343)
.+|.=||+|. |.++..+++++...++.+.++++... ..+ ..|.. + ..++.+. ....|+++.
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~----g~~--i~G~~------~---~~sl~el--~~~~Dlvii 76 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVA----GKT--LLGQQ------G---YATLADV--PEKVDMVDV 76 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSST----TSE--ETTEE------C---CSSTTTC--SSCCSEEEC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccc----ccc--cCCee------c---cCCHHHc--CCCCCEEEE
Confidence 4688899976 77777777665445566777777321 000 01110 0 0123333 246788876
Q ss_pred ccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 261 SAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 261 ~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
. +++.....+++++.+ +.+ ++ +++..+ . ..+++.+.++++|..++.
T Consensus 77 ~-----vp~~~v~~v~~~~~~-~g~-~~-i~i~~~-----~-~~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 77 F-----RNSEAAWGVAQEAIA-IGA-KT-LWLQLG-----V-INEQAAVLAREAGLSVVM 122 (145)
T ss_dssp C-----SCSTHHHHHHHHHHH-HTC-CE-EECCTT-----C-CCHHHHHHHHTTTCEEEC
T ss_pred E-----eCHHHHHHHHHHHHH-cCC-CE-EEEcCC-----h-HHHHHHHHHHHcCCEEEc
Confidence 3 455566667777776 555 55 333211 1 157888899999998874
No 421
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=35.60 E-value=1.2e+02 Score=23.76 Aligned_cols=108 Identities=17% Similarity=0.147 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCCc--CHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeE
Q 019282 180 TPNSHVLEIGCGT--LRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDL 257 (343)
Q Consensus 180 ~~~~rVLDIGCGt--G~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDl 257 (343)
....+|.=||.+. |.++..+++++...++.++++++.. .+. .|.. .. .++.+. .+..|+
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~------~~i--~G~~------~~---~s~~el--~~~vDl 72 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY------DEI--EGLK------CY---RSVREL--PKDVDV 72 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC------SEE--TTEE------CB---SSGGGS--CTTCCE
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC------CeE--CCee------ec---CCHHHh--CCCCCE
Confidence 3456899999854 6667666666655677888888742 111 1110 00 123323 235788
Q ss_pred EEEccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 258 IYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 258 Ivs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
++. .+++.....+++++.+ +.. ++.+ +... . ..+++.+..+++|..++.
T Consensus 73 vii-----~vp~~~v~~v~~~~~~-~g~-~~i~-~~~~-~-----~~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 73 IVF-----VVPPKVGLQVAKEAVE-AGF-KKLW-FQPG-A-----ESEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp EEE-----CSCHHHHHHHHHHHHH-TTC-CEEE-ECTT-S-----CCHHHHHHHHHHTCEEEC
T ss_pred EEE-----EeCHHHHHHHHHHHHH-cCC-CEEE-EcCc-c-----HHHHHHHHHHHCCCEEEc
Confidence 877 3566666667777766 556 5533 3211 1 157788889999998775
No 422
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=35.08 E-value=1e+02 Score=27.48 Aligned_cols=114 Identities=19% Similarity=0.186 Sum_probs=56.9
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEcc
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASA 262 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~ 262 (343)
.+|.=||+|. ++..++..+...++.++..|.+....+...+ .+. .... .+..+. -...|+|+.
T Consensus 8 ~~I~iIG~G~--mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~---~g~----~~~~----~~~~e~--~~~aDvvi~-- 70 (303)
T 3g0o_A 8 FHVGIVGLGS--MGMGAARSCLRAGLSTWGADLNPQACANLLA---EGA----CGAA----ASAREF--AGVVDALVI-- 70 (303)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH---TTC----SEEE----SSSTTT--TTTCSEEEE--
T ss_pred CeEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---cCC----cccc----CCHHHH--HhcCCEEEE--
Confidence 5788887764 5555655553355555555555443332222 122 1111 123222 235688877
Q ss_pred ccccCCch-HHHHHH---HHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 263 VFLHMPDK-LVWVGL---ERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 263 v~~hl~~~-~~~~~L---~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
.++++ ....++ +.+...++| |..+ +..... ..-....+.+.+.+.|..++.
T Consensus 71 ---~vp~~~~~~~v~~~~~~l~~~l~~-g~iv-v~~st~--~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 71 ---LVVNAAQVRQVLFGEDGVAHLMKP-GSAV-MVSSTI--SSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp ---CCSSHHHHHHHHC--CCCGGGSCT-TCEE-EECSCC--CHHHHHHHHHHHHTTTCEEEE
T ss_pred ---ECCCHHHHHHHHhChhhHHhhCCC-CCEE-EecCCC--CHHHHHHHHHHHHHcCCeEEe
Confidence 34543 333344 566678888 5544 432110 000134566667777876654
No 423
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=34.16 E-value=2e+02 Score=25.26 Aligned_cols=104 Identities=9% Similarity=-0.022 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCcC-HHHHHHHHHcCCCce--EEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC-------
Q 019282 181 PNSHVLEIGCGTL-RVGVHFIRYLNPENF--HCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG------- 250 (343)
Q Consensus 181 ~~~rVLDIGCGtG-~~a~~la~~~~~~~~--~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~------- 250 (343)
.++++|=.|++.| .++..+++.+...+. .+++.+... .+...+..... . ....+.. |+.+..
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~--~-~~~~~~~---Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL--KKRVEPLAEEL--G-AFVAGHC---DVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH--HHHHHHHHHHH--T-CEEEEEC---CTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHHhc--C-CceEEEC---CCCCHHHHHHHHH
Confidence 4678998887643 355555554433444 444444321 11111111111 1 2344443 333211
Q ss_pred ----CCCceeEEEEcccccc----------CCchHHH-----------HHHHHHHhccCCCCcEEEEE
Q 019282 251 ----SGVVYDLIYASAVFLH----------MPDKLVW-----------VGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ----~~~~fDlIvs~~v~~h----------l~~~~~~-----------~~L~~l~r~LkP~GG~lvi~ 293 (343)
.-+..|+++.+..+.. .....+. .+++.+.+.+++ +|.++..
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~Iv~i 168 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-GGSILTL 168 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-CEEEEEE
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCEEEEE
Confidence 1147899998765432 2222221 245566777888 8988765
No 424
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=33.27 E-value=93 Score=25.46 Aligned_cols=99 Identities=15% Similarity=0.053 Sum_probs=46.0
Q ss_pred eEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEccc
Q 019282 184 HVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASAV 263 (343)
Q Consensus 184 rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v 263 (343)
+||=.| |+|.++..+++.+-..++.++.++.+....... . ..+..+.++..+... ..-..+|+|+....
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~------~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT---H------KDINILQKDIFDLTL-SDLSDQNVVVDAYG 70 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH---C------SSSEEEECCGGGCCH-HHHTTCSEEEECCC
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc---c------CCCeEEeccccChhh-hhhcCCCEEEECCc
Confidence 566665 478888888877644445554444332222211 1 134455442222211 11235799988765
Q ss_pred cccCCchHHHHHHHHHHhccCCC-CcEEEEE
Q 019282 264 FLHMPDKLVWVGLERLASKLRPY-DGRIFVS 293 (343)
Q Consensus 264 ~~hl~~~~~~~~L~~l~r~LkP~-GG~lvi~ 293 (343)
...-...........+.+.++.. .+++++.
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred CCccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 53221111112334444444441 3555543
No 425
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=32.84 E-value=1.3e+02 Score=26.37 Aligned_cols=32 Identities=13% Similarity=0.109 Sum_probs=22.2
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEE
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIF 291 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lv 291 (343)
.+|+|+.. ++......+++.+...++| +..++
T Consensus 74 ~~d~vi~~-----v~~~~~~~v~~~l~~~l~~-~~~iv 105 (316)
T 2ew2_A 74 QVDLIIAL-----TKAQQLDAMFKAIQPMITE-KTYVL 105 (316)
T ss_dssp CCSEEEEC-----SCHHHHHHHHHHHGGGCCT-TCEEE
T ss_pred CCCEEEEE-----eccccHHHHHHHHHHhcCC-CCEEE
Confidence 68888774 4444556688888888888 55444
No 426
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=32.72 E-value=2.5e+02 Score=24.52 Aligned_cols=108 Identities=12% Similarity=0.051 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCc--eEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--------
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPEN--FHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG-------- 250 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~--~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~-------- 250 (343)
.+++||=.|++ |.++..+++.+...+ +.+++.+...............+ ..+..+..+..+.....
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG---VKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 36688888764 556777777664344 44555554433322222211111 24455544222211110
Q ss_pred CCCceeEEEEcccccc-------CCchHHH-----------HHHHHHHhccCCCCcEEEEE
Q 019282 251 SGVVYDLIYASAVFLH-------MPDKLVW-----------VGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~h-------l~~~~~~-----------~~L~~l~r~LkP~GG~lvi~ 293 (343)
.-+..|+++.+....+ +..+.+. .+++.+.+.+++ +|+++..
T Consensus 122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~g~iv~i 181 (291)
T 3ijr_A 122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-GDVIINT 181 (291)
T ss_dssp HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-TCEEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-CCEEEEE
Confidence 0136899998754322 1222221 355667788888 8887765
No 427
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=31.40 E-value=11 Score=39.49 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=54.1
Q ss_pred cCCCCCCeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC----CC
Q 019282 177 SHITPNSHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK----FG 250 (343)
Q Consensus 177 ~~l~~~~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~----~~ 250 (343)
..+++|.+||=.|+ |.|..+..+++..+. .++++ +.+. .. +... +.. . ..+.....++.+ ..
T Consensus 341 a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t--~~~~-k~----~~l~--lga-~-~v~~~~~~~~~~~i~~~t 408 (795)
T 3slk_A 341 AGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYAT--ASED-KW----QAVE--LSR-E-HLASSRTCDFEQQFLGAT 408 (795)
T ss_dssp TCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEE--CCGG-GG----GGSC--SCG-G-GEECSSSSTHHHHHHHHS
T ss_pred hCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEE--eChH-Hh----hhhh--cCh-h-heeecCChhHHHHHHHHc
Confidence 46788999999984 678888888887653 44444 3322 11 1111 111 1 112111222211 11
Q ss_pred CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 251 SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
....+|+|+-.. ..+ .+....++|+| ||+++..
T Consensus 409 ~g~GvDvVld~~-----gg~----~~~~~l~~l~~-~Gr~v~i 441 (795)
T 3slk_A 409 GGRGVDVVLNSL-----AGE----FADASLRMLPR-GGRFLEL 441 (795)
T ss_dssp CSSCCSEEEECC-----CTT----TTHHHHTSCTT-CEEEEEC
T ss_pred CCCCeEEEEECC-----CcH----HHHHHHHHhcC-CCEEEEe
Confidence 234699998742 222 46788999999 9999875
No 428
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=31.06 E-value=1.3e+02 Score=26.35 Aligned_cols=86 Identities=17% Similarity=0.204 Sum_probs=45.0
Q ss_pred CeEEEEcC-CcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEc
Q 019282 183 SHVLEIGC-GTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYAS 261 (343)
Q Consensus 183 ~rVLDIGC-GtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~ 261 (343)
.+|.=||+ |. ++..++..+...++.++..+.+....+...+ .+. .. .+..+ .-...|+|+..
T Consensus 12 m~I~iIG~tG~--mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~---~g~---~~-------~~~~~--~~~~aDvVi~a 74 (286)
T 3c24_A 12 KTVAILGAGGK--MGARITRKIHDSAHHLAAIEIAPEGRDRLQG---MGI---PL-------TDGDG--WIDEADVVVLA 74 (286)
T ss_dssp CEEEEETTTSH--HHHHHHHHHHHSSSEEEEECCSHHHHHHHHH---TTC---CC-------CCSSG--GGGTCSEEEEC
T ss_pred CEEEEECCCCH--HHHHHHHHHHhCCCEEEEEECCHHHHHHHHh---cCC---Cc-------CCHHH--HhcCCCEEEEc
Confidence 47888988 64 4555554443344455555544433332222 122 11 11111 12357888763
Q ss_pred cccccCCchHHHHHHHHHHhccCCCCcEEEE
Q 019282 262 AVFLHMPDKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 262 ~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
+++.....+++++...++| |. +++
T Consensus 75 -----v~~~~~~~v~~~l~~~l~~-~~-ivv 98 (286)
T 3c24_A 75 -----LPDNIIEKVAEDIVPRVRP-GT-IVL 98 (286)
T ss_dssp -----SCHHHHHHHHHHHGGGSCT-TC-EEE
T ss_pred -----CCchHHHHHHHHHHHhCCC-CC-EEE
Confidence 4555566688888888887 54 444
No 429
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=30.44 E-value=62 Score=28.88 Aligned_cols=112 Identities=16% Similarity=0.099 Sum_probs=56.8
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEcc
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASA 262 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~ 262 (343)
.+|-=||+|. ++..++..+...++.++..|.++...+...+ .+. ... .+..+. .. .|+|+.
T Consensus 16 ~~I~vIG~G~--mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~---~g~-----~~~----~~~~~~--~~-aDvvi~-- 76 (296)
T 3qha_A 16 LKLGYIGLGN--MGAPMATRMTEWPGGVTVYDIRIEAMTPLAE---AGA-----TLA----DSVADV--AA-ADLIHI-- 76 (296)
T ss_dssp CCEEEECCST--THHHHHHHHTTSTTCEEEECSSTTTSHHHHH---TTC-----EEC----SSHHHH--TT-SSEEEE--
T ss_pred CeEEEECcCH--HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH---CCC-----EEc----CCHHHH--Hh-CCEEEE--
Confidence 4788888764 5566666664444444444433322221111 111 111 122222 23 788876
Q ss_pred ccccCCch-HHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 263 VFLHMPDK-LVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 263 v~~hl~~~-~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
.++++ ....+++.+...++| |. +++....... -..+.+.+.+.+.|...+.
T Consensus 77 ---~vp~~~~~~~v~~~l~~~l~~-g~-ivv~~st~~~--~~~~~~~~~~~~~g~~~~~ 128 (296)
T 3qha_A 77 ---TVLDDAQVREVVGELAGHAKP-GT-VIAIHSTISD--TTAVELARDLKARDIHIVD 128 (296)
T ss_dssp ---CCSSHHHHHHHHHHHHTTCCT-TC-EEEECSCCCH--HHHHHHHHHHGGGTCEEEE
T ss_pred ---ECCChHHHHHHHHHHHHhcCC-CC-EEEEeCCCCH--HHHHHHHHHHHHcCCEEEe
Confidence 35543 445578889999998 54 4444221000 0144566667777876654
No 430
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=30.16 E-value=1.2e+02 Score=29.51 Aligned_cols=59 Identities=15% Similarity=0.132 Sum_probs=34.7
Q ss_pred ceeEEEEccccccCCc-hHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEe
Q 019282 254 VYDLIYASAVFLHMPD-KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGK 321 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~-~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~ 321 (343)
..|+|+. .++. .....+++.+...|+| | .+++..+..... ....+.+.+.+.|...+..
T Consensus 68 ~aDvVil-----~Vp~~~~v~~vl~~l~~~L~~-g-~iIId~st~~~~--~t~~~~~~l~~~Gi~fvd~ 127 (484)
T 4gwg_A 68 KPRRIIL-----LVKAGQAVDDFIEKLVPLLDT-G-DIIIDGGNSEYR--DTTRRCRDLKAKGILFVGS 127 (484)
T ss_dssp SSCEEEE-----CSCSSHHHHHHHHHHGGGCCT-T-CEEEECSCCCHH--HHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEE-----ecCChHHHHHHHHHHHHhcCC-C-CEEEEcCCCCch--HHHHHHHHHHhhccccccC
Confidence 3687776 3555 3555688999999998 5 455542211110 1344556677778776653
No 431
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=29.41 E-value=1e+02 Score=28.04 Aligned_cols=99 Identities=21% Similarity=0.242 Sum_probs=52.4
Q ss_pred cCCCCC-CeEEEEcC--CcCHHHHHHHHHcCCCceEEEEcChhH--HHHHHHHhcccCCCCCCCcEEEeccc---CCcCC
Q 019282 177 SHITPN-SHVLEIGC--GTLRVGVHFIRYLNPENFHCLERDELS--LMAAFRYELPSQGLLHKRPIIVRGED---MDFTK 248 (343)
Q Consensus 177 ~~l~~~-~rVLDIGC--GtG~~a~~la~~~~~~~~~vvdid~s~--~~~a~a~~~~~~~~~~~~~~~~~~~~---~dl~~ 248 (343)
..++++ .+||=+|+ |.|.++..+++..+. ...++.-+... ...+.++++ |. . ..+.... .++.+
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~l---Ga---~-~vi~~~~~~~~~~~~ 233 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKEL---GA---T-QVITEDQNNSREFGP 233 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHH---TC---S-EEEEHHHHHCGGGHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHHhc---CC---e-EEEecCccchHHHHH
Confidence 478889 99999986 467778888876543 33333323322 112222222 22 1 1121111 12110
Q ss_pred ----CC--CCCceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 249 ----FG--SGVVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ----~~--~~~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.. ....+|+|+-. .+... .. ...++|+| ||++++.
T Consensus 234 ~i~~~t~~~~~g~Dvvid~-----~G~~~---~~-~~~~~l~~-~G~~v~~ 274 (364)
T 1gu7_A 234 TIKEWIKQSGGEAKLALNC-----VGGKS---ST-GIARKLNN-NGLMLTY 274 (364)
T ss_dssp HHHHHHHHHTCCEEEEEES-----SCHHH---HH-HHHHTSCT-TCEEEEC
T ss_pred HHHHHhhccCCCceEEEEC-----CCchh---HH-HHHHHhcc-CCEEEEe
Confidence 00 12469999753 23322 23 67899999 9998764
No 432
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=27.81 E-value=3.1e+02 Score=29.33 Aligned_cols=129 Identities=11% Similarity=0.049 Sum_probs=64.1
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEeccc---------CCcC-----
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGED---------MDFT----- 247 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~---------~dl~----- 247 (343)
..+++|+=||.|+++.-|..+.-...+.+++++......- ...+ ++ ...+.++. .++.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty-~~N~-----p~--~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAF-RLNN-----PG--STVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHH-HHHC-----TT--SEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHH-HHhC-----CC--CccccccHHHHhhhccchhhhhhhhh
Confidence 4589999999999999887731001233555555443322 2111 11 12222110 0111
Q ss_pred CCCCCCceeEEEEccccccC---Cc---hH-------HHHHHHHHHhccCCCCcEEEEEeccccccCC---CHHHHHHHH
Q 019282 248 KFGSGVVYDLIYASAVFLHM---PD---KL-------VWVGLERLASKLRPYDGRIFVSHNIKFCSRL---GGEECTKRL 311 (343)
Q Consensus 248 ~~~~~~~fDlIvs~~v~~hl---~~---~~-------~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~---~~~~l~~~L 311 (343)
.++..+.+|+|+...-...+ +. .. +...+-++.+.++| -.+++..-..+.... ..+.+.+.|
T Consensus 612 ~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rP--k~~llENV~glls~~~~~~~~~i~~~L 689 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRP--RFFLLENVRNFVSFKRSMVLKLTLRCL 689 (1002)
T ss_dssp BCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCC--SEEEEEEEGGGGTTGGGHHHHHHHHHH
T ss_pred hcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCC--CEEEEeccHHHhccCcchHHHHHHHHH
Confidence 12223578999975433222 11 10 11123455667788 455555322222211 146677788
Q ss_pred HhcCCcEEE
Q 019282 312 TSLGLEYIG 320 (343)
Q Consensus 312 ~~aGf~~v~ 320 (343)
++.||.+..
T Consensus 690 ~~lGY~v~~ 698 (1002)
T 3swr_A 690 VRMGYQCTF 698 (1002)
T ss_dssp HHHTCEEEE
T ss_pred HhcCCeEEE
Confidence 899998643
No 433
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=27.75 E-value=40 Score=26.08 Aligned_cols=33 Identities=18% Similarity=0.326 Sum_probs=21.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCC--ceEEEEcChh
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPE--NFHCLERDEL 216 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~--~~~vvdid~s 216 (343)
..+|+=+|| |.++..+++.+... .+.++|.++.
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 357999988 55777777766433 4455555543
No 434
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=26.86 E-value=79 Score=28.92 Aligned_cols=35 Identities=11% Similarity=0.020 Sum_probs=26.4
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHHcCC----CceEEEEc
Q 019282 179 ITPNSHVLEIGCGTLRVGVHFIRYLNP----ENFHCLER 213 (343)
Q Consensus 179 l~~~~rVLDIGCGtG~~a~~la~~~~~----~~~~vvdi 213 (343)
...+..|+=||||.|+....|++.++. ..+.++|-
T Consensus 58 ~~~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDP 96 (307)
T 3mag_A 58 ILDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDG 96 (307)
T ss_dssp CSTTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCCCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcC
Confidence 334679999999999999999987754 34555553
No 435
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=26.80 E-value=2.3e+02 Score=25.25 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=22.0
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCce--EEEEcChhHH
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENF--HCLERDELSL 218 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~--~vvdid~s~~ 218 (343)
.+.+||=.|++ |.++..+++.+-..++ .+++.+....
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~ 45 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSI 45 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 35678888865 5566777766643444 4455554433
No 436
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=26.36 E-value=1.9e+02 Score=25.80 Aligned_cols=34 Identities=9% Similarity=0.007 Sum_probs=23.7
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEE
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
..+|+|+.. ++......+++.+...++| +..++.
T Consensus 85 ~~~D~vila-----vk~~~~~~~l~~l~~~l~~-~~~iv~ 118 (318)
T 3hwr_A 85 QGADLVLFC-----VKSTDTQSAALAMKPALAK-SALVLS 118 (318)
T ss_dssp TTCSEEEEC-----CCGGGHHHHHHHHTTTSCT-TCEEEE
T ss_pred CCCCEEEEE-----cccccHHHHHHHHHHhcCC-CCEEEE
Confidence 468988773 4444556688999999998 665544
No 437
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=26.10 E-value=29 Score=31.50 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=27.0
Q ss_pred CceeEEEEc----cccccCCchH-----HHHHHHHHHhccCCCCcEEEEE
Q 019282 253 VVYDLIYAS----AVFLHMPDKL-----VWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 ~~fDlIvs~----~v~~hl~~~~-----~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
+.||+|+++ .-.||...-+ ...+=....++|+| ||.+++.
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~p-GGtlv~~ 258 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKP-GGSLLIR 258 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEE-EEEEEEE
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCC-CceEEEE
Confidence 799999986 3345654321 12234456789999 9999875
No 438
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=25.78 E-value=29 Score=31.77 Aligned_cols=30 Identities=3% Similarity=0.012 Sum_probs=22.0
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
.+|+|+-... .. .+..+.++|+| ||++++.
T Consensus 233 g~D~vid~~g-----~~----~~~~~~~~l~~-~G~iv~~ 262 (349)
T 3pi7_A 233 QPRIFLDAVT-----GP----LASAIFNAMPK-RARWIIY 262 (349)
T ss_dssp CCCEEEESSC-----HH----HHHHHHHHSCT-TCEEEEC
T ss_pred CCcEEEECCC-----Ch----hHHHHHhhhcC-CCEEEEE
Confidence 6899986432 22 34778899999 9999875
No 439
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=24.91 E-value=74 Score=30.34 Aligned_cols=16 Identities=13% Similarity=0.323 Sum_probs=13.9
Q ss_pred ccCCCCCHHHHHHHHH
Q 019282 79 SERTSATKEDIEWVRD 94 (343)
Q Consensus 79 ~~~~~~~~~~~~~~~~ 94 (343)
+-|.+++|+.+..|.+
T Consensus 38 E~RValtP~~v~~L~~ 53 (405)
T 4dio_A 38 EGRVAGSVESVKKLKS 53 (405)
T ss_dssp CCCCSCCHHHHHHHHH
T ss_pred CceecCCHHHHHHHHh
Confidence 6788999999998877
No 440
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=24.82 E-value=1.2e+02 Score=28.24 Aligned_cols=120 Identities=20% Similarity=0.287 Sum_probs=65.8
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCC
Q 019282 169 VFEFLAEASHITPNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTK 248 (343)
Q Consensus 169 ~~~~l~~~~~l~~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~ 248 (343)
..+.|.+.+.. .+.+||.++-+-|.++..+.. ....+++. |.-....+.+ ..++. .... ....
T Consensus 34 ~~~~l~~~~~~-~~~~~l~~n~~~g~~~~~~~~---~~~~~~~~-~~~~~~~~l~----~~~~~---~~~~----~~~~- 96 (381)
T 3dmg_A 34 VHDLLQKTVEP-FGERALDLNPGVGWGSLPLEG---RMAVERLE-TSRAAFRCLT----ASGLQ---ARLA----LPWE- 96 (381)
T ss_dssp HHHHHHTTCCC-CSSEEEESSCTTSTTTGGGBT---TBEEEEEE-CBHHHHHHHH----HTTCC---CEEC----CGGG-
T ss_pred HHHHHHHHHHH-hCCcEEEecCCCCccccccCC---CCceEEEe-CcHHHHHHHH----HcCCC---cccc----CCcc-
Confidence 34555554444 346999999999987665542 13344443 2222222222 22332 1111 1122
Q ss_pred CCCCCceeEEEEccccccCCc----hHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHh-cCC
Q 019282 249 FGSGVVYDLIYASAVFLHMPD----KLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTS-LGL 316 (343)
Q Consensus 249 ~~~~~~fDlIvs~~v~~hl~~----~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~-aGf 316 (343)
.....||+|+. .+|. ......|..+.+.|+| ||.+++.-... -+.+.+.+.++. .|+
T Consensus 97 -~~~~~~d~v~~-----~~Pk~k~~~~~~~~l~~~~~~l~~-g~~i~~~g~~~----~g~~~~~~~~~~~~~~ 158 (381)
T 3dmg_A 97 -AAAGAYDLVVL-----ALPAGRGTAYVQASLVAAARALRM-GGRLYLAGDKN----KGFERYFKEARALLGY 158 (381)
T ss_dssp -SCTTCEEEEEE-----ECCGGGCHHHHHHHHHHHHHHEEE-EEEEEEEEEGG----GTHHHHHHHHHHHHSC
T ss_pred -CCcCCCCEEEE-----ECCcchhHHHHHHHHHHHHHhCCC-CCEEEEEEccH----HHHHHHHHHHHhhhcc
Confidence 13468999977 3442 2345578999999999 99998874211 145556666653 344
No 441
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=24.51 E-value=4.8e+02 Score=25.15 Aligned_cols=20 Identities=10% Similarity=0.079 Sum_probs=17.6
Q ss_pred CCeEEEEcCCcCHHHHHHHH
Q 019282 182 NSHVLEIGCGTLRVGVHFIR 201 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~ 201 (343)
..+++|+=||.|.+..-|..
T Consensus 88 ~~~viDLFaG~GGlslG~~~ 107 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFES 107 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHT
T ss_pred cceEEEecCCccHHHHHHHH
Confidence 35899999999999998876
No 442
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=24.20 E-value=3.4e+02 Score=23.33 Aligned_cols=108 Identities=18% Similarity=0.170 Sum_probs=54.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEE--cChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--------
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLE--RDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG-------- 250 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvd--id~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~-------- 250 (343)
.++++|=.|++ |.++..+++.+...+..++- ........+...+....+ .....+..+..+.....
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG---GRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 36688888865 55677777766445555443 333222222222222222 24445544222221110
Q ss_pred CCCceeEEEEccccccC------CchHHH-----------HHHHHHHhccCCCCcEEEEE
Q 019282 251 SGVVYDLIYASAVFLHM------PDKLVW-----------VGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl------~~~~~~-----------~~L~~l~r~LkP~GG~lvi~ 293 (343)
.-+..|+++.+...... ..+.+. ..++.+.+.+++ +|.++..
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-~g~iv~i 164 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-GGRIITI 164 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-TCEEEEE
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 01368999987654322 222221 245667778888 8887765
No 443
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=23.87 E-value=64 Score=19.55 Aligned_cols=19 Identities=21% Similarity=0.513 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHHHHHHhcc
Q 019282 19 VLVLTLSVAAIFFFFLLSS 37 (343)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (343)
+..|++.++.+++|++|-+
T Consensus 7 ~malt~i~gl~vif~~lg~ 25 (40)
T 2l9u_A 7 TMALTVIAGLVVIFMMLGG 25 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCc
Confidence 3567788888888888754
No 444
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=23.76 E-value=2.6e+02 Score=24.21 Aligned_cols=33 Identities=27% Similarity=0.179 Sum_probs=22.1
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhc-cCCCCcEEE
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASK-LRPYDGRIF 291 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~-LkP~GG~lv 291 (343)
...|+|+. .++......+++++... ++| |..++
T Consensus 65 ~~aDvVil-----avp~~~~~~v~~~l~~~~l~~-~~ivi 98 (290)
T 3b1f_A 65 ALADVIIL-----AVPIKKTIDFIKILADLDLKE-DVIIT 98 (290)
T ss_dssp GGCSEEEE-----CSCHHHHHHHHHHHHTSCCCT-TCEEE
T ss_pred cCCCEEEE-----cCCHHHHHHHHHHHHhcCCCC-CCEEE
Confidence 35788877 35555556678888888 887 54443
No 445
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=23.70 E-value=3.6e+02 Score=23.44 Aligned_cols=105 Identities=11% Similarity=0.030 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChh--HHHH-HHHHhcccCCCCCCCcEEEecccCCcCCCC-------
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDEL--SLMA-AFRYELPSQGLLHKRPIIVRGEDMDFTKFG------- 250 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s--~~~~-a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~------- 250 (343)
.++++|=.|+ +|.++..+++.+...+..++-.+.. .... .........+ ..+..+.. |+.+..
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPG---DLSDESFARSLVH 120 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCC---CTTSHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEe---cCCCHHHHHHHHH
Confidence 3668888875 5667777777665455555544332 2211 1111111111 13444433 333211
Q ss_pred ----CCCceeEEEEcccccc-------CCchHHH-----------HHHHHHHhccCCCCcEEEEE
Q 019282 251 ----SGVVYDLIYASAVFLH-------MPDKLVW-----------VGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 251 ----~~~~fDlIvs~~v~~h-------l~~~~~~-----------~~L~~l~r~LkP~GG~lvi~ 293 (343)
.-+..|+++.+..... +..+.+. .+++.+.+.+++ +|.++..
T Consensus 121 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~g~Iv~i 184 (294)
T 3r3s_A 121 KAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-GASIITT 184 (294)
T ss_dssp HHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-TCEEEEE
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-CCEEEEE
Confidence 0146899998765432 1222221 345667778888 8988765
No 446
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=23.65 E-value=43 Score=31.25 Aligned_cols=125 Identities=18% Similarity=0.195 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYA 260 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs 260 (343)
.+++|.=||+| .++..+++.+...+..++..|.+....+.+.+ .+. ... .++.+. -...|+|+.
T Consensus 163 ~gktvGIIG~G--~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~---~g~-----~~~----~~l~el--l~~aDvV~l 226 (351)
T 3jtm_A 163 EGKTIGTVGAG--RIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE---TGA-----KFV----EDLNEM--LPKCDVIVI 226 (351)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH---HCC-----EEC----SCHHHH--GGGCSEEEE
T ss_pred cCCEEeEEEeC--HHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh---CCC-----eEc----CCHHHH--HhcCCEEEE
Confidence 46789998775 57777777665566667776654311111111 111 111 122222 235788887
Q ss_pred ccccccCCchHHHHHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEeeeccccc
Q 019282 261 SAVFLHMPDKLVWVGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKKTHDSLL 328 (343)
Q Consensus 261 ~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~~~~~l~ 328 (343)
.--+..-... . +-++....||| |..+ |.... ......+.+.+.|++-+..-.....+..-|
T Consensus 227 ~~Plt~~t~~-l--i~~~~l~~mk~-gail-IN~aR--G~~vde~aL~~aL~~g~i~ga~lDV~~~EP 287 (351)
T 3jtm_A 227 NMPLTEKTRG-M--FNKELIGKLKK-GVLI-VNNAR--GAIMERQAVVDAVESGHIGGYSGDVWDPQP 287 (351)
T ss_dssp CSCCCTTTTT-C--BSHHHHHHSCT-TEEE-EECSC--GGGBCHHHHHHHHHHTSEEEEEESCCSSSS
T ss_pred CCCCCHHHHH-h--hcHHHHhcCCC-CCEE-EECcC--chhhCHHHHHHHHHhCCccEEEeCCCCCCC
Confidence 4322100000 0 12456677998 5544 44221 111237788888887665544444444333
No 447
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=22.89 E-value=1.9e+02 Score=25.58 Aligned_cols=89 Identities=18% Similarity=0.168 Sum_probs=43.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEE
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYA 260 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs 260 (343)
++.+|+=||+| ..+..+++.+...+..++..|.+....+...+ .+. ..... .++.+. -...|+|+.
T Consensus 156 ~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~---~g~-----~~~~~--~~l~~~--l~~aDvVi~ 221 (300)
T 2rir_A 156 HGSQVAVLGLG--RTGMTIARTFAALGANVKVGARSSAHLARITE---MGL-----VPFHT--DELKEH--VKDIDICIN 221 (300)
T ss_dssp TTSEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTC-----EEEEG--GGHHHH--STTCSEEEE
T ss_pred CCCEEEEEccc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CCC-----eEEch--hhHHHH--hhCCCEEEE
Confidence 47899999885 46665555443233344444443322221111 111 11111 122222 246899988
Q ss_pred ccccccCCchHHHHHHHHHHhccCCCCcEEEE
Q 019282 261 SAVFLHMPDKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 261 ~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
.-..+.+. . +..+.+|| |+.++-
T Consensus 222 ~~p~~~i~-~-------~~~~~mk~-g~~lin 244 (300)
T 2rir_A 222 TIPSMILN-Q-------TVLSSMTP-KTLILD 244 (300)
T ss_dssp CCSSCCBC-H-------HHHTTSCT-TCEEEE
T ss_pred CCChhhhC-H-------HHHHhCCC-CCEEEE
Confidence 65543222 2 24578999 776543
No 448
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=22.89 E-value=3.2e+02 Score=23.34 Aligned_cols=109 Identities=11% Similarity=0.079 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEE--cChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCC--------
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLE--RDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFG-------- 250 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvd--id~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~-------- 250 (343)
.++++|=.|+ +|.++..+++.+...++.++- ............+....+ .....+..+..+.....
T Consensus 17 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 17 DGKVALVTGS-GRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp TTCEEEESCT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3567787775 456677777766445555543 333222222222222222 24455544222211110
Q ss_pred CCCceeEEEEccccccC------CchHHH-----------HHHHHHHhccCCCCcEEEEEe
Q 019282 251 SGVVYDLIYASAVFLHM------PDKLVW-----------VGLERLASKLRPYDGRIFVSH 294 (343)
Q Consensus 251 ~~~~fDlIvs~~v~~hl------~~~~~~-----------~~L~~l~r~LkP~GG~lvi~~ 294 (343)
.-+..|+++.+...... ..+.+. .+.+.+.+.+++ +|.++...
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~g~iv~is 152 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-GGRIVLTS 152 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-TCEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCeEEEEe
Confidence 01367999877554332 222221 245667788888 89887663
No 449
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=22.70 E-value=1.7e+02 Score=27.12 Aligned_cols=33 Identities=21% Similarity=0.103 Sum_probs=23.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHHcCCCceEEEEcC
Q 019282 181 PNSHVLEIGCGTLRVGVHFIRYLNPENFHCLERD 214 (343)
Q Consensus 181 ~~~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid 214 (343)
++.+||=.| |+|.++..+++.+...+..++.++
T Consensus 68 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~ 100 (427)
T 4f6c_A 68 PLGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFI 100 (427)
T ss_dssp CCEEEEEEC-TTSHHHHHHHHHHTTTEEEEEEEE
T ss_pred CCCEEEEec-CCcHHHHHHHHHHHcCCCEEEEEE
Confidence 345788776 578899999988866665555543
No 450
>2ww9_C Protein transport protein SEB2; ribonucleoprotein, transmembrane, phospho signal sequence, membrane, ribosome, transport; 8.60A {Saccharomyces cerevisiae} PDB: 2wwa_C
Probab=22.62 E-value=50 Score=24.47 Aligned_cols=21 Identities=43% Similarity=0.490 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHHHHHhccC
Q 019282 18 PVLVLTLSVAAIFFFFLLSSL 38 (343)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~ 38 (343)
|+.||.+|++.+++-++|-.+
T Consensus 61 P~~VLv~sl~FIa~VilLHI~ 81 (87)
T 2ww9_C 61 SLVVLFLSVGFIFSVIALHLL 81 (87)
T ss_dssp HHHHHHHHHHHHHHHHHC---
T ss_pred CeeehhhHHHHHHHHHHHHHh
Confidence 788888888777777776544
No 451
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=22.52 E-value=1.9e+02 Score=25.37 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=55.4
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEcc
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASA 262 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~ 262 (343)
.+|.=||||. ++..++..+...++.++..|.+....+...+ .+. ... .+..+. -...|+|+.
T Consensus 4 ~~I~iiG~G~--mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~---~g~-----~~~----~~~~~~--~~~aDvvi~-- 65 (302)
T 2h78_A 4 KQIAFIGLGH--MGAPMATNLLKAGYLLNVFDLVQSAVDGLVA---AGA-----SAA----RSARDA--VQGADVVIS-- 65 (302)
T ss_dssp CEEEEECCST--THHHHHHHHHHTTCEEEEECSSHHHHHHHHH---TTC-----EEC----SSHHHH--HTTCSEEEE--
T ss_pred CEEEEEeecH--HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH---CCC-----eEc----CCHHHH--HhCCCeEEE--
Confidence 4788888875 4444444443344455555554443332222 121 111 122111 134688876
Q ss_pred ccccCCch-HHHHHHH---HHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEE
Q 019282 263 VFLHMPDK-LVWVGLE---RLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIG 320 (343)
Q Consensus 263 v~~hl~~~-~~~~~L~---~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~ 320 (343)
.++.+ ....++. .+...++| |. +++....... -..+.+.+.+.+.|..++.
T Consensus 66 ---~vp~~~~~~~v~~~~~~~~~~l~~-~~-~vi~~st~~~--~~~~~l~~~~~~~g~~~~~ 120 (302)
T 2h78_A 66 ---MLPASQHVEGLYLDDDGLLAHIAP-GT-LVLECSTIAP--TSARKIHAAARERGLAMLD 120 (302)
T ss_dssp ---CCSCHHHHHHHHHSSSCGGGSSCS-SC-EEEECSCCCH--HHHHHHHHHHHHTTCCEEE
T ss_pred ---ECCCHHHHHHHHcCchhHHhcCCC-Cc-EEEECCCCCH--HHHHHHHHHHHHcCCEEEE
Confidence 35433 3444566 67778888 54 4444210000 0134567777777877665
No 452
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=22.35 E-value=89 Score=22.66 Aligned_cols=34 Identities=12% Similarity=0.188 Sum_probs=21.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHHcCCCc-eEEEEcChhH
Q 019282 182 NSHVLEIGCGTLRVGVHFIRYLNPEN-FHCLERDELS 217 (343)
Q Consensus 182 ~~rVLDIGCGtG~~a~~la~~~~~~~-~~vvdid~s~ 217 (343)
+.+|+=+|+ |.++..+++.+...+ +.++.++.+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999998 777777776553344 4444444433
No 453
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=21.96 E-value=1e+02 Score=28.07 Aligned_cols=99 Identities=14% Similarity=0.206 Sum_probs=51.0
Q ss_pred cCCCCCCeEEEEcCC-cCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccC---CcCCCCCC
Q 019282 177 SHITPNSHVLEIGCG-TLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDM---DFTKFGSG 252 (343)
Q Consensus 177 ~~l~~~~rVLDIGCG-tG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~---dl~~~~~~ 252 (343)
.+++++.+||=+|+| .|.++..+++...... ++.++.+....+.++++ |. . ..+..... .+.+....
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~--Vi~~~~~~~~~~~~~~l---Ga---~-~vi~~~~~~~~~v~~~~~g 252 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPAT--VIALDVKEEKLKLAERL---GA---D-HVVDARRDPVKQVMELTRG 252 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCE--EEEEESSHHHHHHHHHT---TC---S-EEEETTSCHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe--EEEEeCCHHHHHHHHHh---CC---C-EEEeccchHHHHHHHHhCC
Confidence 678899999999985 3555556666551233 44444444444444443 21 1 11211111 01111112
Q ss_pred CceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEEE
Q 019282 253 VVYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 253 ~~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
..+|+|+-. .+... ...++...+. + ||++++.
T Consensus 253 ~g~Dvvid~-----~G~~~-~~~~~~~~~~--~-~G~~v~~ 284 (359)
T 1h2b_A 253 RGVNVAMDF-----VGSQA-TVDYTPYLLG--R-MGRLIIV 284 (359)
T ss_dssp CCEEEEEES-----SCCHH-HHHHGGGGEE--E-EEEEEEC
T ss_pred CCCcEEEEC-----CCCch-HHHHHHHhhc--C-CCEEEEE
Confidence 369999864 23321 0135556666 8 9998764
No 454
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=21.64 E-value=58 Score=32.67 Aligned_cols=44 Identities=20% Similarity=0.257 Sum_probs=29.2
Q ss_pred CCCCCceeEEEEc----cccccCCchH-----HHHHHHHHHhccCCCCcEEEEE
Q 019282 249 FGSGVVYDLIYAS----AVFLHMPDKL-----VWVGLERLASKLRPYDGRIFVS 293 (343)
Q Consensus 249 ~~~~~~fDlIvs~----~v~~hl~~~~-----~~~~L~~l~r~LkP~GG~lvi~ 293 (343)
++..+.||+|+.+ .-.||...-+ ...+=....+.||| ||.+++.
T Consensus 216 ~p~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~p-GGt~v~~ 268 (670)
T 4gua_A 216 FPPQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNP-GGTLVVK 268 (670)
T ss_dssp CCCCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEE-EEEEEEE
T ss_pred CCCCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCC-CceEEEE
Confidence 3346799999986 3456654321 12234556789999 9999875
No 455
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=21.31 E-value=1.8e+02 Score=27.71 Aligned_cols=37 Identities=11% Similarity=-0.074 Sum_probs=21.4
Q ss_pred CeEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHH
Q 019282 183 SHVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAA 221 (343)
Q Consensus 183 ~rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a 221 (343)
.+|-=||+ |.++..++..+...++.++.+|.+....+
T Consensus 3 mkI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~ 39 (450)
T 3gg2_A 3 LDIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIE 39 (450)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CEEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHH
Confidence 46777776 45666666655445555666665554433
No 456
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=21.20 E-value=1.4e+02 Score=26.63 Aligned_cols=114 Identities=16% Similarity=0.170 Sum_probs=56.7
Q ss_pred eEEEEcCCcCHHHHHHHHHcCCCceEEEEcChhHHHHHHHHhcccCCCCCCCcEEEecccCCcCCCCCCCceeEEEEccc
Q 019282 184 HVLEIGCGTLRVGVHFIRYLNPENFHCLERDELSLMAAFRYELPSQGLLHKRPIIVRGEDMDFTKFGSGVVYDLIYASAV 263 (343)
Q Consensus 184 rVLDIGCGtG~~a~~la~~~~~~~~~vvdid~s~~~~a~a~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~fDlIvs~~v 263 (343)
+|==||.| .++..++..+-..++.++..|.+.... +.+.+.|. ... .+..+. ...-|+|++.
T Consensus 7 kIgfIGLG--~MG~~mA~~L~~~G~~V~v~dr~~~~~---~~l~~~G~-----~~~----~s~~e~--~~~~dvvi~~-- 68 (297)
T 4gbj_A 7 KIAFLGLG--NLGTPIAEILLEAGYELVVWNRTASKA---EPLTKLGA-----TVV----ENAIDA--ITPGGIVFSV-- 68 (297)
T ss_dssp EEEEECCS--TTHHHHHHHHHHTTCEEEEC----------CTTTTTTC-----EEC----SSGGGG--CCTTCEEEEC--
T ss_pred cEEEEecH--HHHHHHHHHHHHCCCeEEEEeCCHHHH---HHHHHcCC-----eEe----CCHHHH--HhcCCceeee--
Confidence 56667665 466666666655677777766544322 12221221 111 122222 2356888764
Q ss_pred cccCCchHH-H-HHHHHHHhccCCCCcEEEEEeccccccCCCHHHHHHHHHhcCCcEEEee
Q 019282 264 FLHMPDKLV-W-VGLERLASKLRPYDGRIFVSHNIKFCSRLGGEECTKRLTSLGLEYIGKK 322 (343)
Q Consensus 264 ~~hl~~~~~-~-~~L~~l~r~LkP~GG~lvi~~~~~~~~~~~~~~l~~~L~~aGf~~v~~~ 322 (343)
++++.. . .+...+...++| |+.++-...... -...++.+.+++.|..++..-
T Consensus 69 ---l~~~~~~~~v~~~~~~~~~~~-~~iiid~sT~~p---~~~~~~~~~~~~~g~~~ldap 122 (297)
T 4gbj_A 69 ---LADDAAVEELFSMELVEKLGK-DGVHVSMSTISP---ETSRQLAQVHEWYGAHYVGAP 122 (297)
T ss_dssp ---CSSHHHHHHHSCHHHHHHHCT-TCEEEECSCCCH---HHHHHHHHHHHHTTCEEEECC
T ss_pred ---ccchhhHHHHHHHHHHhhcCC-CeEEEECCCCCh---HHHHHHHHHHHhcCCceecCC
Confidence 344322 1 134567888998 665543321110 015667788889998877643
No 457
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=20.78 E-value=1.9e+02 Score=25.87 Aligned_cols=33 Identities=18% Similarity=0.079 Sum_probs=22.1
Q ss_pred ceeEEEEccccccCCchHHHHHHHHHHhccCCCCcEEEE
Q 019282 254 VYDLIYASAVFLHMPDKLVWVGLERLASKLRPYDGRIFV 292 (343)
Q Consensus 254 ~fDlIvs~~v~~hl~~~~~~~~L~~l~r~LkP~GG~lvi 292 (343)
.+|+|+.. ++......+++.+...++| |..++.
T Consensus 75 ~~D~vi~~-----v~~~~~~~~~~~l~~~l~~-~~~vv~ 107 (359)
T 1bg6_A 75 DADVILIV-----VPAIHHASIAANIASYISE-GQLIIL 107 (359)
T ss_dssp TCSEEEEC-----SCGGGHHHHHHHHGGGCCT-TCEEEE
T ss_pred cCCEEEEe-----CCchHHHHHHHHHHHhCCC-CCEEEE
Confidence 57888774 3333345588899999998 654443
No 458
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=20.74 E-value=26 Score=33.23 Aligned_cols=16 Identities=13% Similarity=0.156 Sum_probs=13.6
Q ss_pred ccCCCCCHHHHHHHHH
Q 019282 79 SERTSATKEDIEWVRD 94 (343)
Q Consensus 79 ~~~~~~~~~~~~~~~~ 94 (343)
+-|.+++|+.+..|.+
T Consensus 35 E~RValtP~~v~~L~~ 50 (381)
T 3p2y_A 35 ERRVALVPKVVEKLSA 50 (381)
T ss_dssp CCCCSSCHHHHHHHHH
T ss_pred CceecCCHHHHHHHHh
Confidence 6688999999988876
Done!