Query 019284
Match_columns 343
No_of_seqs 435 out of 2770
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 13:42:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.8 2.7E-20 9.3E-25 144.1 8.2 70 67-136 4-73 (79)
2 2ctp_A DNAJ homolog subfamily 99.8 8.1E-20 2.8E-24 141.1 8.8 70 67-137 4-73 (78)
3 2yua_A Williams-beuren syndrom 99.8 1.1E-19 3.9E-24 146.8 9.1 71 66-136 13-83 (99)
4 1hdj_A Human HSP40, HDJ-1; mol 99.8 1.1E-19 3.9E-24 140.0 8.5 68 69-137 2-69 (77)
5 2ej7_A HCG3 gene; HCG3 protein 99.8 1.5E-19 5.3E-24 140.8 9.1 70 67-136 6-76 (82)
6 2ctr_A DNAJ homolog subfamily 99.8 1.8E-19 6E-24 142.6 7.8 70 67-137 4-73 (88)
7 2cug_A Mkiaa0962 protein; DNAJ 99.8 2.6E-19 8.8E-24 141.7 8.4 69 68-137 15-83 (88)
8 2och_A Hypothetical protein DN 99.8 2.1E-19 7.1E-24 137.3 7.5 66 68-136 6-71 (73)
9 2ctq_A DNAJ homolog subfamily 99.8 2.1E-19 7.1E-24 148.5 7.4 71 67-137 17-87 (112)
10 2ctw_A DNAJ homolog subfamily 99.8 5.2E-19 1.8E-23 145.4 9.5 71 67-137 14-84 (109)
11 1wjz_A 1700030A21RIK protein; 99.8 3.7E-19 1.3E-23 141.9 7.8 70 67-136 13-88 (94)
12 2dmx_A DNAJ homolog subfamily 99.8 6.4E-19 2.2E-23 140.3 8.9 70 68-137 7-77 (92)
13 2o37_A Protein SIS1; HSP40, J- 99.8 6.8E-19 2.3E-23 140.4 7.1 67 68-137 6-72 (92)
14 1bq0_A DNAJ, HSP40; chaperone, 99.8 2.8E-19 9.6E-24 145.4 4.4 69 69-137 2-70 (103)
15 2lgw_A DNAJ homolog subfamily 99.8 1.2E-18 4.2E-23 141.0 7.7 68 70-137 2-70 (99)
16 2l6l_A DNAJ homolog subfamily 99.8 6.1E-19 2.1E-23 153.2 6.0 71 67-137 7-83 (155)
17 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 2.9E-18 9.9E-23 140.7 5.5 70 68-137 13-86 (109)
18 3apq_A DNAJ homolog subfamily 99.7 1.1E-17 3.6E-22 150.1 6.8 68 70-137 2-69 (210)
19 2ys8_A RAB-related GTP-binding 99.7 1.3E-17 4.3E-22 132.6 4.9 62 69-131 26-87 (90)
20 2pf4_E Small T antigen; PP2A, 99.7 8.4E-18 2.9E-22 149.0 2.1 65 69-137 10-76 (174)
21 3hho_A CO-chaperone protein HS 99.6 1.1E-16 3.6E-21 142.1 6.1 68 69-136 3-77 (174)
22 1gh6_A Large T antigen; tumor 99.6 2.7E-17 9.1E-22 136.5 1.2 64 69-136 7-72 (114)
23 3bvo_A CO-chaperone protein HS 99.6 2.9E-16 1E-20 142.9 7.7 81 55-135 28-115 (207)
24 1faf_A Large T antigen; J doma 99.6 1.6E-16 5.3E-21 123.5 4.2 61 69-133 10-72 (79)
25 1iur_A KIAA0730 protein; DNAJ 99.6 9.7E-17 3.3E-21 127.3 2.7 65 66-130 12-77 (88)
26 1fpo_A HSC20, chaperone protei 99.6 2.6E-16 8.8E-21 139.2 5.6 66 71-136 2-74 (171)
27 3lz8_A Putative chaperone DNAJ 99.6 3.7E-17 1.3E-21 158.4 0.0 69 67-136 25-93 (329)
28 1n4c_A Auxilin; four helix bun 99.6 5.1E-16 1.7E-20 138.4 2.9 65 68-132 115-182 (182)
29 2guz_A Mitochondrial import in 99.6 9.9E-16 3.4E-20 116.5 3.0 59 67-129 11-70 (71)
30 3uo3_A J-type CO-chaperone JAC 99.5 2.1E-15 7.2E-20 134.6 4.1 67 67-136 8-81 (181)
31 2qwo_B Putative tyrosine-prote 99.5 1.9E-15 6.5E-20 120.7 2.0 56 70-125 33-91 (92)
32 3ag7_A Putative uncharacterize 99.5 4.4E-15 1.5E-19 121.6 2.5 60 67-127 38-104 (106)
33 3apo_A DNAJ homolog subfamily 99.5 3.3E-15 1.1E-19 157.9 1.1 71 67-137 18-88 (780)
34 2y4t_A DNAJ homolog subfamily 98.9 1.5E-09 5.2E-14 103.5 5.5 65 70-134 382-449 (450)
35 2guz_B Mitochondrial import in 98.8 3.1E-09 1.1E-13 79.4 5.0 52 71-126 5-59 (65)
36 1iqz_A Ferredoxin; iron-sulfer 98.4 7.8E-08 2.7E-12 73.4 2.0 61 155-216 3-72 (81)
37 1dax_A Ferredoxin I; electron 98.2 9.9E-07 3.4E-11 63.8 3.1 60 155-214 3-63 (64)
38 1rof_A Ferredoxin; electron tr 98.1 2.1E-06 7.3E-11 60.7 3.4 58 156-214 3-60 (60)
39 1sj1_A Ferredoxin; thermostabi 98.0 1.5E-06 5.2E-11 62.6 1.4 59 155-214 3-65 (66)
40 1f2g_A Ferredoxin II; electron 97.9 4.4E-06 1.5E-10 59.0 2.4 56 156-213 2-58 (58)
41 1dwl_A Ferredoxin I; electron 97.8 4.1E-06 1.4E-10 58.9 1.2 56 156-213 2-59 (59)
42 1rgv_A Ferredoxin; electron tr 96.8 0.00068 2.3E-08 50.9 3.3 68 157-229 2-76 (80)
43 2fgo_A Ferredoxin; allochromat 96.8 0.0016 5.5E-08 49.1 4.9 67 157-228 2-75 (82)
44 3eun_A Ferredoxin; electron tr 96.6 0.0009 3.1E-08 50.6 2.6 69 157-228 2-75 (82)
45 1xer_A Ferredoxin; electron tr 96.4 0.00025 8.5E-09 55.7 -1.8 59 155-214 37-102 (103)
46 2zvs_A Uncharacterized ferredo 96.2 0.0047 1.6E-07 46.9 4.6 70 157-229 2-77 (85)
47 1jb0_C Photosystem I iron-sulf 96.1 0.00038 1.3E-08 51.9 -2.2 61 155-215 2-67 (80)
48 1bc6_A 7-Fe ferredoxin; electr 96.0 0.0063 2.2E-07 45.1 4.1 71 157-235 2-75 (77)
49 3c8y_A Iron hydrogenase 1; dit 96.0 0.00088 3E-08 69.0 -1.0 91 154-250 138-243 (574)
50 1kqf_B FDH-N beta S, formate d 95.6 0.0037 1.2E-07 59.1 1.9 65 155-221 125-195 (294)
51 1h98_A Ferredoxin; electron tr 95.3 0.0021 7.2E-08 48.0 -0.9 71 157-235 2-75 (78)
52 1hfe_L Protein (Fe-only hydrog 95.3 0.0016 5.4E-08 64.6 -2.1 58 155-215 27-87 (421)
53 1jnr_B Adenylylsulfate reducta 95.2 0.0016 5.4E-08 55.6 -1.9 63 156-219 3-71 (150)
54 3gyx_B Adenylylsulfate reducta 95.0 0.0026 8.8E-08 55.2 -1.4 62 156-218 2-69 (166)
55 7fd1_A FD1, protein (7-Fe ferr 94.7 0.017 5.9E-07 45.5 2.9 55 157-215 2-59 (106)
56 1ti6_B Pyrogallol hydroxytrans 94.6 0.035 1.2E-06 51.8 5.2 61 155-218 91-162 (274)
57 2vpz_B NRFC protein; oxidoredu 94.3 0.026 8.9E-07 50.0 3.4 59 155-216 82-146 (195)
58 1gte_A Dihydropyrimidine dehyd 93.2 0.0074 2.5E-07 66.0 -2.6 60 154-216 944-1008(1025)
59 2fdn_A Ferredoxin; electron tr 93.0 0.099 3.4E-06 35.7 3.9 50 160-213 5-55 (55)
60 2v2k_A Ferredoxin; iron, trans 92.8 0.035 1.2E-06 43.5 1.5 55 157-215 2-59 (105)
61 3i9v_9 NADH-quinone oxidoreduc 92.4 0.013 4.3E-07 50.3 -1.7 56 159-215 49-118 (182)
62 2ivf_B Ethylbenzene dehydrogen 91.8 0.059 2E-06 52.3 2.0 60 155-217 176-242 (352)
63 1h0h_B Formate dehydrogenase ( 90.9 0.061 2.1E-06 48.2 1.0 64 155-221 100-172 (214)
64 3i9v_3 NADH-quinone oxidoreduc 90.6 0.027 9.2E-07 59.9 -2.0 62 154-215 172-240 (783)
65 2pzi_A Probable serine/threoni 82.6 0.72 2.4E-05 47.5 3.4 46 69-122 628-675 (681)
66 1q16_B Respiratory nitrate red 82.5 0.36 1.2E-05 49.0 1.1 57 155-213 209-271 (512)
67 2c42_A Pyruvate-ferredoxin oxi 74.8 0.47 1.6E-05 53.0 -0.9 61 156-217 681-768 (1231)
68 2vpz_B NRFC protein; oxidoredu 66.8 4.4 0.00015 35.4 3.7 59 155-216 50-111 (195)
69 1q16_B Respiratory nitrate red 63.9 1.6 5.6E-05 44.2 0.4 59 155-215 176-237 (512)
70 2ivf_B Ethylbenzene dehydrogen 57.9 1.2 4.1E-05 43.0 -1.8 60 154-215 142-204 (352)
71 2gmh_A Electron transfer flavo 55.3 5.4 0.00018 40.5 2.5 62 154-216 502-574 (584)
72 7fd1_A FD1, protein (7-Fe ferr 54.2 4.4 0.00015 31.3 1.3 22 155-176 31-52 (106)
73 1h0h_B Formate dehydrogenase ( 53.7 4.9 0.00017 35.6 1.7 57 157-215 66-130 (214)
74 3or1_B Sulfite reductase beta; 51.3 3.6 0.00012 40.0 0.4 21 155-175 250-270 (386)
75 3j16_B RLI1P; ribosome recycli 50.7 2.9 0.0001 43.0 -0.3 22 153-174 45-66 (608)
76 3mm5_A Sulfite reductase, diss 48.6 4.1 0.00014 40.1 0.4 36 154-189 277-312 (418)
77 2v2k_A Ferredoxin; iron, trans 46.1 6.7 0.00023 30.0 1.2 59 156-216 32-91 (105)
78 1kqf_B FDH-N beta S, formate d 45.0 6.1 0.00021 36.8 0.9 55 156-215 93-153 (294)
79 3mm5_B Sulfite reductase, diss 39.0 5.2 0.00018 38.5 -0.6 24 153-176 231-254 (366)
80 1ti6_B Pyrogallol hydroxytrans 38.7 3.9 0.00013 37.8 -1.5 56 156-214 61-118 (274)
81 3or1_A Sulfite reductase alpha 36.6 8 0.00027 38.4 0.3 37 154-190 294-330 (437)
82 3i9v_9 NADH-quinone oxidoreduc 34.2 6.1 0.00021 33.1 -0.9 21 156-176 91-111 (182)
83 2pa8_D DNA-directed RNA polyme 33.2 9.2 0.00031 35.0 0.0 86 164-266 174-260 (265)
84 2c42_A Pyruvate-ferredoxin oxi 30.7 8.5 0.00029 43.0 -0.7 20 156-175 737-756 (1231)
85 1jnr_B Adenylylsulfate reducta 30.0 8.9 0.0003 31.9 -0.6 21 156-176 40-60 (150)
86 1hfe_L Protein (Fe-only hydrog 28.1 19 0.00065 35.1 1.3 18 159-176 62-79 (421)
87 3gyx_B Adenylylsulfate reducta 26.4 11 0.00039 31.9 -0.5 21 156-176 39-59 (166)
88 2wdq_B Succinate dehydrogenase 26.4 18 0.00061 32.0 0.7 21 156-176 142-162 (238)
89 3vr8_B Iron-sulfur subunit of 26.3 28 0.00095 32.3 2.1 17 161-177 180-196 (282)
90 2pa8_D DNA-directed RNA polyme 25.7 16 0.00054 33.4 0.2 26 156-181 196-221 (265)
91 2h88_B Succinate dehydrogenase 25.6 19 0.00064 32.4 0.7 19 158-176 153-171 (252)
92 3bk7_A ABC transporter ATP-bin 23.6 14 0.00046 38.0 -0.7 21 154-174 60-80 (607)
93 1kf6_B Fumarate reductase iron 21.4 14 0.00046 32.9 -1.1 21 156-176 141-161 (243)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=2.7e-20 Score=144.05 Aligned_cols=70 Identities=41% Similarity=0.684 Sum_probs=66.1
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
....|||+||||+++++.++||++||+|++++|||+++.++.+.+.|+.|++||++|+||.+|..||.++
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g 73 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYG 73 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhcc
Confidence 4567999999999999999999999999999999999877788999999999999999999999999975
No 2
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=8.1e-20 Score=141.15 Aligned_cols=70 Identities=37% Similarity=0.581 Sum_probs=65.4
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
....|||+||||+++++.++||++|++|++++|||+++. +.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 73 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQYDQFGS 73 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 456799999999999999999999999999999999987 7789999999999999999999999999753
No 3
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=146.80 Aligned_cols=71 Identities=31% Similarity=0.401 Sum_probs=66.6
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 66 DAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 66 ~~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
.....|||+||||+++++.++||+|||+|+++||||+++.++.+.+.|+.|++||+||+||.+|..||...
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999877889999999999999999999999999864
No 4
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.80 E-value=1.1e-19 Score=139.99 Aligned_cols=68 Identities=38% Similarity=0.596 Sum_probs=63.7
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 69 ~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
..|||+||||+++++.++||+||++|++++|||+++. +.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 69 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGE 69 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4689999999999999999999999999999999987 6688999999999999999999999999753
No 5
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=140.76 Aligned_cols=70 Identities=36% Similarity=0.488 Sum_probs=64.6
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP-ETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~-~a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
....|||+||||+++++.++||+||++|++++|||+++... .+.+.|+.|++||++|+||.+|..||.++
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g 76 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYG 76 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 34579999999999999999999999999999999998753 57889999999999999999999999975
No 6
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.8e-19 Score=142.62 Aligned_cols=70 Identities=33% Similarity=0.497 Sum_probs=65.4
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
....|||+||||+++++.++||++||+|++++|||+++. +.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 73 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDTLGH 73 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS-HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 456799999999999999999999999999999999986 7889999999999999999999999998753
No 7
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=2.6e-19 Score=141.65 Aligned_cols=69 Identities=33% Similarity=0.517 Sum_probs=64.8
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 68 ~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
...|||+||||+++++.++||++||+|++++|||+++. +.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 83 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGS 83 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence 46799999999999999999999999999999999987 6788999999999999999999999999863
No 8
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.78 E-value=2.1e-19 Score=137.25 Aligned_cols=66 Identities=38% Similarity=0.581 Sum_probs=61.7
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 68 ~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
...|||+||||+++++.++||++|++|++++|||++++ ..+.|+.|++||++|+||.+|..||.+|
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~R~~YD~~g 71 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD---GAEQFKQISQAYEVLSDEKKRQIYDQGG 71 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT---CHHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC---HHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 45799999999999999999999999999999999976 3689999999999999999999999975
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.1e-19 Score=148.47 Aligned_cols=71 Identities=24% Similarity=0.400 Sum_probs=66.5
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
....|||+||||+++++.++||+|||+|+++||||++++++.+.+.|+.|++||+||+||.+|..||.++.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 87 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRR 87 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhh
Confidence 34679999999999999999999999999999999998777899999999999999999999999999763
No 10
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=5.2e-19 Score=145.44 Aligned_cols=71 Identities=35% Similarity=0.547 Sum_probs=66.5
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
....|||+||||+++++.++||++||+|++++|||+++.++++.+.|+.|++||+||+||.+|..||.++.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 84 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS 84 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence 34579999999999999999999999999999999999878899999999999999999999999998753
No 11
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.77 E-value=3.7e-19 Score=141.94 Aligned_cols=70 Identities=24% Similarity=0.458 Sum_probs=64.3
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC------hHHHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD------PETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~------~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
....|||+||||+++++.++||+|||+|+++||||+++.+ +.+.+.|+.|++||+||+||.+|..||...
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 4567999999999999999999999999999999998743 457899999999999999999999999874
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=6.4e-19 Score=140.33 Aligned_cols=70 Identities=39% Similarity=0.591 Sum_probs=64.6
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 68 ~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~-~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
...|||+||||+++++.++||++||+|+++||||+++.. ..+++.|+.|++||++|+||.+|..||..+.
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 77 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC 77 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCS
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 457999999999999999999999999999999999875 4678999999999999999999999999753
No 13
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.76 E-value=6.8e-19 Score=140.41 Aligned_cols=67 Identities=31% Similarity=0.533 Sum_probs=62.0
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 68 ~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
...|||+||||+++++.++||++|++|++++|||+++.+ .+.|+.|++||++|+||.+|..||.++.
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 72 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGL 72 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCH
Confidence 457999999999999999999999999999999999773 5699999999999999999999998753
No 14
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.76 E-value=2.8e-19 Score=145.42 Aligned_cols=69 Identities=35% Similarity=0.537 Sum_probs=64.9
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 69 ~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
..|||+||||+++++.++||++||+|++++|||+++.++++++.|+.|++||++|+||.+|..||.++.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 70 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGH 70 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTT
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhh
Confidence 368999999999999999999999999999999998767788999999999999999999999999764
No 15
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=1.2e-18 Score=140.99 Aligned_cols=68 Identities=32% Similarity=0.468 Sum_probs=63.3
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD-PETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 70 ~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~-~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
.|||+||||+++++.++||+|||+|++++|||+++.. ..+.+.|+.|++||++|+||.+|..||.++.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~ 70 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGR 70 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 5899999999999999999999999999999999875 4578999999999999999999999999863
No 16
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.75 E-value=6.1e-19 Score=153.24 Aligned_cols=71 Identities=24% Similarity=0.408 Sum_probs=64.1
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh------HHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP------ETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~------~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
....|||+||||+++++.++||+|||+|++++|||+++..+ .+.+.|..|++||+||+||.+|+.||..+.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 34579999999999999999999999999999999988753 357899999999999999999999997653
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.72 E-value=2.9e-18 Score=140.69 Aligned_cols=70 Identities=21% Similarity=0.290 Sum_probs=64.6
Q ss_pred CCCCchhhcCCCCCC-CHHHHHHHHHHHHHhcCCCCCCC---ChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 68 IADDYYAVLGLLPDA-TPEQIKKAYYNCMKACHPDLSGD---DPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 68 ~~~d~Y~iLGv~~~a-s~~eIK~AYr~la~~~HPDk~~~---~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
...|||+||||++++ +.++||+|||+|++++|||++++ .+.+.+.|+.|++||++|+||.+|..||.++.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 467999999999999 99999999999999999999876 35678999999999999999999999999864
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.70 E-value=1.1e-17 Score=150.10 Aligned_cols=68 Identities=28% Similarity=0.502 Sum_probs=64.8
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 70 ~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
.|||+||||+++++.++||+|||+|++++|||++++++++.+.|+.|++||++|+||.+|..||.++.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~ 69 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE 69 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcc
Confidence 58999999999999999999999999999999998778899999999999999999999999999864
No 19
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1.3e-17 Score=132.64 Aligned_cols=62 Identities=21% Similarity=0.338 Sum_probs=57.9
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHh
Q 019284 69 ADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMV 131 (343)
Q Consensus 69 ~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~ 131 (343)
..|||+||||+++++.++||+|||+|+++||||+++. +.+.+.|+.|++||++|+||.+|..
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999987 6688999999999999999998863
No 20
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.67 E-value=8.4e-18 Score=148.98 Aligned_cols=65 Identities=28% Similarity=0.358 Sum_probs=57.9
Q ss_pred CCCchhhcCCCCCCC--HHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 69 ADDYYAVLGLLPDAT--PEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 69 ~~d~Y~iLGv~~~as--~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
..|||+||||+++++ .++||+|||++++++|||++++ ++.|++|++||++|+||.+|+.||++|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 468999999999998 6999999999999999999876 4789999999999999999999999875
No 21
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.64 E-value=1.1e-16 Score=142.07 Aligned_cols=68 Identities=25% Similarity=0.366 Sum_probs=61.7
Q ss_pred CCCchhhcCCCCCCC--HHHHHHHHHHHHHhcCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 69 ADDYYAVLGLLPDAT--PEQIKKAYYNCMKACHPDLSGDDPE-----TTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 69 ~~d~Y~iLGv~~~as--~~eIK~AYr~la~~~HPDk~~~~~~-----a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
..|||+||||+++++ .++||++||+|+++||||++++.+. +.+.|..||+||+||+||.+|..||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 569999999999987 9999999999999999999887543 5689999999999999999999999853
No 22
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.64 E-value=2.7e-17 Score=136.53 Aligned_cols=64 Identities=27% Similarity=0.334 Sum_probs=59.7
Q ss_pred CCCchhhcCCCCCCCH--HHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 69 ADDYYAVLGLLPDATP--EQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 69 ~~d~Y~iLGv~~~as~--~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
..+||+||||+++++. ++||+|||+|++++|||++++ .+.|++|++||+||+||.+|..||.++
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 4589999999999999 999999999999999999876 478999999999999999999999865
No 23
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.63 E-value=2.9e-16 Score=142.88 Aligned_cols=81 Identities=15% Similarity=0.303 Sum_probs=66.8
Q ss_pred ccccccccCCCCCCCCCchhhcCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCChH-----HHHHHHHHHHHHHHcCChh
Q 019284 55 ARVTAEDSASTDAIADDYYAVLGLLPD--ATPEQIKKAYYNCMKACHPDLSGDDPE-----TTNFCMFINEVYAVLSDPV 127 (343)
Q Consensus 55 ~~~~~~~~~~~~~~~~d~Y~iLGv~~~--as~~eIK~AYr~la~~~HPDk~~~~~~-----a~~~f~~I~eAY~vLsdp~ 127 (343)
+.|..+..........|||+||||+++ ++.++||++||+|+++||||++++.+. +.+.|+.||+||+||+||.
T Consensus 28 ~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~ 107 (207)
T 3bvo_A 28 FFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPL 107 (207)
T ss_dssp CBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred cccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
Confidence 334444444444456799999999986 799999999999999999999886532 4578999999999999999
Q ss_pred HHHhhhhh
Q 019284 128 QRMVYDEI 135 (343)
Q Consensus 128 ~R~~YD~~ 135 (343)
+|..||..
T Consensus 108 ~R~~Yd~~ 115 (207)
T 3bvo_A 108 SRGLYLLK 115 (207)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999974
No 24
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.62 E-value=1.6e-16 Score=123.51 Aligned_cols=61 Identities=16% Similarity=0.277 Sum_probs=55.9
Q ss_pred CCCchhhcCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhh
Q 019284 69 ADDYYAVLGLLPD--ATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYD 133 (343)
Q Consensus 69 ~~d~Y~iLGv~~~--as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD 133 (343)
..++|+||||+++ ++.++||+|||+|++++|||++++ .+.|++|++||++|+|+.+|..++
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 3589999999999 999999999999999999999765 578999999999999999998743
No 25
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.62 E-value=9.7e-17 Score=127.28 Aligned_cols=65 Identities=12% Similarity=0.060 Sum_probs=58.6
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHH
Q 019284 66 DAIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP-ETTNFCMFINEVYAVLSDPVQRM 130 (343)
Q Consensus 66 ~~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~-~a~~~f~~I~eAY~vLsdp~~R~ 130 (343)
.....++|+||||+++++.+|||+|||+|+++||||+++++. .+++.|+.|++||++|+|...|.
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence 345578999999999999999999999999999999998863 57899999999999999987773
No 26
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.62 E-value=2.6e-16 Score=139.24 Aligned_cols=66 Identities=20% Similarity=0.370 Sum_probs=60.7
Q ss_pred CchhhcCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 71 DYYAVLGLLPDA--TPEQIKKAYYNCMKACHPDLSGDDPE-----TTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 71 d~Y~iLGv~~~a--s~~eIK~AYr~la~~~HPDk~~~~~~-----a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
|||+||||++++ +..+||++||+|+++||||++++.+. +.+.|..||+||+||+||.+|..||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 99999999999999999999887543 4579999999999999999999999863
No 27
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.61 E-value=3.7e-17 Score=158.35 Aligned_cols=69 Identities=32% Similarity=0.535 Sum_probs=0.0
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
....|||+||||+++|+.+|||+|||+|+++||||++++ +.+++.|++|++||++|+||.+|..||+++
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 93 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLW 93 (329)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhh
Confidence 445799999999999999999999999999999999986 578899999999999999999999999973
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.57 E-value=5.1e-16 Score=138.40 Aligned_cols=65 Identities=25% Similarity=0.452 Sum_probs=59.7
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChH---HHHHHHHHHHHHHHcCChhHHHhh
Q 019284 68 IADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPE---TTNFCMFINEVYAVLSDPVQRMVY 132 (343)
Q Consensus 68 ~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~---a~~~f~~I~eAY~vLsdp~~R~~Y 132 (343)
...|||+||||+++++.++||+|||+|+++||||++++.+. +++.|+.|++||+||+||.+|..|
T Consensus 115 ~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 115 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 33699999999999999999999999999999999887543 789999999999999999999887
No 29
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.56 E-value=9.9e-16 Score=116.51 Aligned_cols=59 Identities=24% Similarity=0.251 Sum_probs=52.3
Q ss_pred CCCCCchhhcCCCC-CCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHH
Q 019284 67 AIADDYYAVLGLLP-DATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQR 129 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~-~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R 129 (343)
....++|+||||++ +++.++||++||+|++++|||++++ .+.|++|++||++|+|+..|
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhhc
Confidence 34468999999999 7999999999999999999999654 46999999999999988655
No 30
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.54 E-value=2.1e-15 Score=134.57 Aligned_cols=67 Identities=21% Similarity=0.400 Sum_probs=60.3
Q ss_pred CCCCCchhhc------CCCC-CCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhh
Q 019284 67 AIADDYYAVL------GLLP-DATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIH 136 (343)
Q Consensus 67 ~~~~d~Y~iL------Gv~~-~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~ 136 (343)
....|||+|| |+++ +++..+||++||+|+++||||++++ +.+.|..|++||+||+||.+|..||...
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3457999999 4665 8999999999999999999999986 6788999999999999999999999853
No 31
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.52 E-value=1.9e-15 Score=120.74 Aligned_cols=56 Identities=23% Similarity=0.425 Sum_probs=51.4
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh---HHHHHHHHHHHHHHHcCC
Q 019284 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDP---ETTNFCMFINEVYAVLSD 125 (343)
Q Consensus 70 ~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~---~a~~~f~~I~eAY~vLsd 125 (343)
.++|++|||++.+|.+|||+|||+++++||||++++++ .+++.|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999998754 378899999999999964
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.50 E-value=4.4e-15 Score=121.61 Aligned_cols=60 Identities=12% Similarity=0.138 Sum_probs=52.4
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---Ch----HHHHHHHHHHHHHHHcCChh
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGD---DP----ETTNFCMFINEVYAVLSDPV 127 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~---~~----~a~~~f~~I~eAY~vLsdp~ 127 (343)
+...|||+|||++. +|.++||+|||+++++||||++++ ++ .+++.|+.|++||++|+|+.
T Consensus 38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 34579999999996 999999999999999999999764 12 36889999999999999985
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.49 E-value=3.3e-15 Score=157.89 Aligned_cols=71 Identities=27% Similarity=0.466 Sum_probs=40.6
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHhhhhhhc
Q 019284 67 AIADDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDEIHG 137 (343)
Q Consensus 67 ~~~~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp~~R~~YD~~~~ 137 (343)
....|||+||||+++|+.++||+|||+|+++||||++++++++.+.|+.|++||++|+||.+|+.||.++.
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~ 88 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE 88 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcc
Confidence 45679999999999999999999999999999999998778889999999999999999999999999763
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.86 E-value=1.5e-09 Score=103.52 Aligned_cols=65 Identities=32% Similarity=0.490 Sum_probs=55.6
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC---hHHHHHHHHHHHHHHHcCChhHHHhhhh
Q 019284 70 DDYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDD---PETTNFCMFINEVYAVLSDPVQRMVYDE 134 (343)
Q Consensus 70 ~d~Y~iLGv~~~as~~eIK~AYr~la~~~HPDk~~~~---~~a~~~f~~I~eAY~vLsdp~~R~~YD~ 134 (343)
.++|.+||+...++.++|+++|+++++++|||+.+.+ ..+++.|..|++||++|+||.+|..||.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999998773 2478899999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.83 E-value=3.1e-09 Score=79.39 Aligned_cols=52 Identities=8% Similarity=0.073 Sum_probs=46.3
Q ss_pred CchhhcCCCCC---CCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHcCCh
Q 019284 71 DYYAVLGLLPD---ATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDP 126 (343)
Q Consensus 71 d~Y~iLGv~~~---as~~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~vLsdp 126 (343)
+-|.||||+++ ++.++|+++||+|+..+|||+.+. ...+.+|++|+++|...
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 56899999999 999999999999999999999765 57778999999998643
No 36
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=98.40 E-value=7.8e-08 Score=73.40 Aligned_cols=61 Identities=31% Similarity=0.581 Sum_probs=47.5
Q ss_pred ccccccccccCCCCccCCCCcccccccccCceEEecC---------CCCHHHHHHHHHcCCccccccccch
Q 019284 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQ---------CGINEFVQQAIESCPVDCIHRTSAQ 216 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~vF~~edd~G~a~V~~q---------~g~~e~~~eAv~~CPv~AI~~~~~~ 216 (343)
.+.+|...|+|||.|..++|++|.++++ |.+.+..+ .........++..||++||++...+
T Consensus 3 ~v~vd~~~CigCg~C~~~CP~~~~~~~~-g~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~AI~~~~~~ 72 (81)
T 1iqz_A 3 YTIVDKETCIACGACGAAAPDIYDYDED-GIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEP 72 (81)
T ss_dssp EEEECTTTCCCCSHHHHHCTTTEEECTT-SCEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEESSC
T ss_pred EEEEecccCcccChhhHhCchheeeCCC-CeEEEeccCccccCCCCHHHHHHHHHHHHhCCHhHEEEecCC
Confidence 4678999999999999999999998754 76665532 1223457789999999999987653
No 37
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=98.15 E-value=9.9e-07 Score=63.76 Aligned_cols=60 Identities=33% Similarity=0.776 Sum_probs=46.0
Q ss_pred ccccccccccCCCCccCCCCcccccccccCceEEecC-CCCHHHHHHHHHcCCcccccccc
Q 019284 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRTS 214 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~vF~~edd~G~a~V~~q-~g~~e~~~eAv~~CPv~AI~~~~ 214 (343)
.+.+|...|++||.|...+|+.|.++++.|...++.. ...-......+..||++||++.+
T Consensus 3 ~~~id~~~C~~Cg~C~~~CP~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 63 (64)
T 1dax_A 3 KFYVDQDECIACESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWED 63 (64)
T ss_dssp CCEECSTTCCSCCHHHHHCTTTEEECSSSSSEEECCGGGSCHHHHHHHHHHSSSCCEECCC
T ss_pred EEEEccccCCCchHHHHhCCccEeEcCCCCEEEEecCCCcchhHHHHHHHhCCHhhEeeec
Confidence 3567888999999999999999988764355555431 23345677899999999999865
No 38
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=98.07 E-value=2.1e-06 Score=60.66 Aligned_cols=58 Identities=36% Similarity=0.701 Sum_probs=42.4
Q ss_pred cccccccccCCCCccCCCCcccccccccCceEEecCCCCHHHHHHHHHcCCcccccccc
Q 019284 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTS 214 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~ 214 (343)
+.+|...|++|+.|...+|..|.++++ |...+......-......+..||++||.+.+
T Consensus 3 ~~i~~~~C~~C~~C~~~Cp~~~~~~~~-~~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~~ 60 (60)
T 1rof_A 3 VRVDADACIGCGVCENLCPDVFQLGDD-GKAKVLQPETDLPCAKDAADSCPTGAISVEE 60 (60)
T ss_dssp SEECTTTCCSCCSSTTTCTTTBCCCSS-SCCCBSCSSCCSTTHHHHHHHCTTCCEECCC
T ss_pred EEEchhhCCCChHHHHhCcHHHeECCC-CCEeecCchhhHHHHHHHHHhCCHhHEEEeC
Confidence 567888999999999999998887654 5544442112222356789999999998753
No 39
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=97.99 E-value=1.5e-06 Score=62.63 Aligned_cols=59 Identities=31% Similarity=0.619 Sum_probs=44.2
Q ss_pred ccccccccccCCCCccCCCCcccccccccCceEEecCC-CC---HHHHHHHHHcCCcccccccc
Q 019284 155 HVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQC-GI---NEFVQQAIESCPVDCIHRTS 214 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~vF~~edd~G~a~V~~q~-g~---~e~~~eAv~~CPv~AI~~~~ 214 (343)
.+.+|...|++||.|...+|+.|.++++ |...++.+. .+ .......++.||++||.+.+
T Consensus 3 ~~~id~~~C~~C~~C~~~Cp~~~~~~~~-~~~~~~~~~~~~~~~c~~c~~C~~~CP~~Ai~~~~ 65 (66)
T 1sj1_A 3 KVSVDQDTCIGDAICASLCPDVFEMNDE-GKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEE 65 (66)
T ss_dssp EEEECTTTCCCCCHHHHHCTTTEEECTT-SCEEESCSCBCCHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred EEEECcccCcCchHHHHhCCceEEECCC-CceeecccCCCcHHHHHHHHHHHhhCCHhhEEEec
Confidence 3567889999999999999998888654 665555432 22 23457889999999998753
No 40
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=97.90 E-value=4.4e-06 Score=58.99 Aligned_cols=56 Identities=32% Similarity=0.712 Sum_probs=42.1
Q ss_pred cccccccccCCCCccCCCCcccccccccCceEEecC-CCCHHHHHHHHHcCCccccccc
Q 019284 156 VFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYNQ-CGINEFVQQAIESCPVDCIHRT 213 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~vF~~edd~G~a~V~~q-~g~~e~~~eAv~~CPv~AI~~~ 213 (343)
+.+| ..|++||.|..++|..|.++++ |...++.+ ...-......++.||++||.++
T Consensus 2 v~id-~~C~~C~~C~~~CP~~~~~~~~-~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 58 (58)
T 1f2g_A 2 IEVN-DDCMACEACVEICPDVFEMNEE-GDKAVVINPDSDLDCVEEAIDSCPAEAIVRS 58 (58)
T ss_dssp CBCT-TTCCCCCHHHHHCTTTEEECSS-SSSEEESCTTCCSTHHHHHHHTCSSCCCBCC
T ss_pred cEEC-CcCccchHHHHhCCccEEECCC-CcEEEeCCCccchHHHHHHHhhCChhhEEeC
Confidence 4678 8899999999999998887654 65555541 2223356789999999999863
No 41
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=97.83 E-value=4.1e-06 Score=58.93 Aligned_cols=56 Identities=36% Similarity=0.809 Sum_probs=41.0
Q ss_pred cccccccccCCCCccCCCCccccc-ccccCceEE-ecCCCCHHHHHHHHHcCCccccccc
Q 019284 156 VFVDEFSCIGCKNCNNVAPEVFKI-EEDFGRARV-YNQCGINEFVQQAIESCPVDCIHRT 213 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~vF~~-edd~G~a~V-~~q~g~~e~~~eAv~~CPv~AI~~~ 213 (343)
+.+|...|++|+.|...+|..|.+ +++ |...+ +... .-......+..||++||.++
T Consensus 2 i~i~~~~C~~C~~C~~~Cp~~~~~~~~~-~~~~~~~~~~-~c~~C~~C~~~CP~~Ai~~~ 59 (59)
T 1dwl_A 2 IVIDHEECIGCESCVELCPEVFAMIDGE-EKAMVTAPDS-TAECAQDAIDACPVEAISKE 59 (59)
T ss_dssp EEESSCCCSSCCGGGGTSTTTEEEEECS-SCEEESCTTC-CCGGGGTGGGGSTTCCEEEC
T ss_pred eEEChhhCcChhHHHHHCCHHheecCCC-CcEEEecChh-hhhHHHHHHHhCCHhhEEcC
Confidence 467888899999999999998888 433 66555 2322 22245568899999999863
No 42
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=96.83 E-value=0.00068 Score=50.93 Aligned_cols=68 Identities=18% Similarity=0.284 Sum_probs=43.2
Q ss_pred ccccccccCCCCccCCCC-cccccccccCceEEecCCCCHHHHH------HHHHcCCccccccccchhhhhHHHHHHHHH
Q 019284 157 FVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQ------QAIESCPVDCIHRTSAQQLSLLEDEMRRVE 229 (343)
Q Consensus 157 fVDe~~CigCg~C~~vaP-~vF~~edd~G~a~V~~q~g~~e~~~------eAv~~CPv~AI~~~~~~~l~~le~~~~~~~ 229 (343)
+++...|++|+.|...+| +.+.+++ +... +.... -..-. ..+..||++||.+.... ....+++|.+..
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~--~~~~-~~~~~-C~~C~~~~~~~~C~~~CP~~Ai~~~~~~-~~~~~~~~~~~~ 76 (80)
T 1rgv_A 2 LYINDDCTACDACVEECPNEAITPGD--PIYV-IDPTK-CSECVGAFDEPQCRLVCPADCIPDNPDY-RETREELQEKYD 76 (80)
T ss_dssp BCCCSCCCCCCTTTTTCTTCCEECCS--SSCE-ECTTT-CCTTTTTCSSCHHHHHCSSCCCCBCGGG-CCCHHHHHHHHH
T ss_pred eEeCCCCcChhhHHHHcChhccCcCC--CeeE-Ecchh-CcCCCCcCCccHHHHhcCcccEEecCCc-ccCHHHHHHHHH
Confidence 356778999999999999 5677655 3322 22210 01122 68899999999997653 233555555443
No 43
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=96.76 E-value=0.0016 Score=49.05 Aligned_cols=67 Identities=24% Similarity=0.347 Sum_probs=42.3
Q ss_pred ccccccccCCCCccCCCC-cccccccccCceEEecCCCCHHHHH------HHHHcCCccccccccchhhhhHHHHHHHH
Q 019284 157 FVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQ------QAIESCPVDCIHRTSAQQLSLLEDEMRRV 228 (343)
Q Consensus 157 fVDe~~CigCg~C~~vaP-~vF~~edd~G~a~V~~q~g~~e~~~------eAv~~CPv~AI~~~~~~~l~~le~~~~~~ 228 (343)
+++...|++|+.|..++| +.+.+++ +.. ++.... -..-. ..+..||++||.+..... ..++++|.++
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~--~~~-~~~~~~-C~~C~~~~~~~~C~~~CP~~Ai~~~~~~~-~~~~~~~~~~ 75 (82)
T 2fgo_A 2 LKITDDCINCDVCEPECPNGAISQGE--EIY-VIDPNL-CTECVGHYDEPQCQQVCPVDCIPLDDANV-ESKDQLMEKY 75 (82)
T ss_dssp BCCCTTCCCCCTTGGGCTTCCEEECS--SSE-EECTTT-CCTTTTTCSSCHHHHHCTTCCCCBCTTSC-CCHHHHHHHH
T ss_pred ceeCCCCCChhhHHHHCChhccCCCC--CeE-EEEchh-CccCCCcCCCCHhHhhCCcccEEccCCCc-cCHHHHHHHH
Confidence 456778999999999999 5677654 332 232211 00112 688999999999976532 2345555443
No 44
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=96.62 E-value=0.0009 Score=50.62 Aligned_cols=69 Identities=17% Similarity=0.308 Sum_probs=42.1
Q ss_pred ccccccccCCCCccCCCCc-ccccccccCceEEecC--CC--CHHHHHHHHHcCCccccccccchhhhhHHHHHHHH
Q 019284 157 FVDEFSCIGCKNCNNVAPE-VFKIEEDFGRARVYNQ--CG--INEFVQQAIESCPVDCIHRTSAQQLSLLEDEMRRV 228 (343)
Q Consensus 157 fVDe~~CigCg~C~~vaP~-vF~~edd~G~a~V~~q--~g--~~e~~~eAv~~CPv~AI~~~~~~~l~~le~~~~~~ 228 (343)
++|...|++|+.|..++|. .+.+++ +...+... .+ .....-..+..||++||.+.... ....++++..+
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~--~~~~i~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~~-~~~~~~~~~~~ 75 (82)
T 3eun_A 2 LMITDECINCDVCEPECPNGAISQGD--ETYVIEPSLCTECVGHYETSQCVEVCPVDAIIKDPSH-EETEDELRAKY 75 (82)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEEECS--SSEEECGGGCCTTTTTCSSCHHHHHCTTCCEEECGGG-CCCHHHHHHHH
T ss_pred eEeCCCCcCccchHHHCChhheEcCC--CceEEchhhcCCCCCCCCccHHHHhCCccceEEcCCC-cCCHHHHHHHH
Confidence 4677889999999999995 566654 33333222 11 00001168899999999998652 13344444443
No 45
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=96.42 E-value=0.00025 Score=55.73 Aligned_cols=59 Identities=29% Similarity=0.411 Sum_probs=38.8
Q ss_pred ccccccccccCCCCccCCCC-cccccccccCce------EEecCCCCHHHHHHHHHcCCcccccccc
Q 019284 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRA------RVYNQCGINEFVQQAIESCPVDCIHRTS 214 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP-~vF~~edd~G~a------~V~~q~g~~e~~~eAv~~CPv~AI~~~~ 214 (343)
.+.+|...|++||.|..+|| +.|.+.++.+.. ..+.. ..-..-...+..||++||.+..
T Consensus 37 ~~~id~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~-~~C~~Cg~C~~~CP~~Ai~~~~ 102 (103)
T 1xer_A 37 IVGVDFDLCIADGSCINACPVNVFQWYDTPGHPASEKKADPVNE-QACIFCMACVNVCPVAAIDVKP 102 (103)
T ss_dssp SEEEETTTCCCCCHHHHHCTTCCCEEEECTTCSSCSEEEECTTG-GGCCCCCHHHHHCTTCCEEECC
T ss_pred eEEEehhhCCChhhHHHHcCccCeecccccCccccccceeecCc-ccccChhhHHHhccccceEecC
Confidence 56789999999999999999 667765432211 11111 0001124688999999999864
No 46
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=96.24 E-value=0.0047 Score=46.90 Aligned_cols=70 Identities=16% Similarity=0.302 Sum_probs=42.0
Q ss_pred ccccccccCCCCccCCCC-cccccccccCceEEecC--CCCH--HHHHHHHHcCCc-cccccccchhhhhHHHHHHHHH
Q 019284 157 FVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQ--CGIN--EFVQQAIESCPV-DCIHRTSAQQLSLLEDEMRRVE 229 (343)
Q Consensus 157 fVDe~~CigCg~C~~vaP-~vF~~edd~G~a~V~~q--~g~~--e~~~eAv~~CPv-~AI~~~~~~~l~~le~~~~~~~ 229 (343)
+++...|++|+.|...+| +.+.+++ +...+... .+-. ...-..+..||+ +||.+..... ...+++|.++.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~~--~~~~~~~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~~~~~-~~~~~~~~~~~ 77 (85)
T 2zvs_A 2 LLITKKCINCDMCEPECPNEAISMGD--HIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHV-ETEEQLWDKFV 77 (85)
T ss_dssp EEECTTCCCCCTTTTTCTTCCEECCS--SSCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECTTSCC-CHHHHHHHHHH
T ss_pred EEeCCcCcChhHHHHHCchhccCcCC--CceEEeChhccCCCCcCCccHhhHhCcCCCCEEecCCCC-CCHHHHHHHHH
Confidence 456778999999999999 4566654 32222211 1100 000167899999 9999976532 33455555443
No 47
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=96.10 E-value=0.00038 Score=51.86 Aligned_cols=61 Identities=20% Similarity=0.361 Sum_probs=38.6
Q ss_pred ccccccccccCCCCccCCCC-cccccccccCc--eEEecCCCCH--HHHHHHHHcCCccccccccc
Q 019284 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGR--ARVYNQCGIN--EFVQQAIESCPVDCIHRTSA 215 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP-~vF~~edd~G~--a~V~~q~g~~--e~~~eAv~~CPv~AI~~~~~ 215 (343)
++.+|...|++|+.|..++| +.|.+++..+. ..+....... ..-...+..||++||.+...
T Consensus 2 ~~~~~~~~C~~Cg~C~~~CP~~a~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~ai~~~~~ 67 (80)
T 1jb0_C 2 HTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVY 67 (80)
T ss_dssp CEEEEETTCCCCCHHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCCHHHHHCCSSSCSEEEE
T ss_pred CCcccCCcCcChhHHHHHCCcccccccccccccccccccCCCCCcCcCcCChhhhCCCCccEeeee
Confidence 35567788999999999999 67776542131 1111111001 12346889999999997644
No 48
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=95.97 E-value=0.0063 Score=45.13 Aligned_cols=71 Identities=18% Similarity=0.214 Sum_probs=44.7
Q ss_pred ccccccccC--CCCccCCCCc-ccccccccCceEEecCCCCHHHHHHHHHcCCccccccccchhhhhHHHHHHHHHhhcc
Q 019284 157 FVDEFSCIG--CKNCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLSLLEDEMRRVERVNV 233 (343)
Q Consensus 157 fVDe~~Cig--Cg~C~~vaP~-vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~~~l~~le~~~~~~~~~~v 233 (343)
++|...|++ |+.|..++|. .+.+++ +... +.... -..-...+..||++||.+... ..++++..+.++..
T Consensus 2 ~i~~~~C~~c~C~~C~~~Cp~~ai~~~~--~~~~-~~~~~-C~~Cg~C~~~CP~~ai~~~~~----~~~~~~~~~~~d~~ 73 (77)
T 1bc6_A 2 YVITEPCIGTKDASCVEVCPVDCIHEGE--DQYY-IDPDV-CIDCGACEAVCPVSAIYHEDF----VPEEWKSYIQKNRD 73 (77)
T ss_dssp EECCSTTTTCCCCSSTTTCTTCCEEECS--SSEE-ECTTT-CCSCCSHHHHSGGGSSEETTT----SCHHHHHHHHHHHH
T ss_pred EEeCccCCCCCcchhHHhcccccEEeCC--CcEE-ECccc-CcCccCCHhhcCccceEecCC----CHHHHHHHHHHhHH
Confidence 467788999 8999999995 455543 3332 32210 001224678999999997543 34556666666666
Q ss_pred ce
Q 019284 234 AM 235 (343)
Q Consensus 234 ~~ 235 (343)
||
T Consensus 74 fy 75 (77)
T 1bc6_A 74 FF 75 (77)
T ss_dssp HT
T ss_pred hh
Confidence 55
No 49
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=95.95 E-value=0.00088 Score=68.97 Aligned_cols=91 Identities=16% Similarity=0.279 Sum_probs=55.4
Q ss_pred cccccccccccCCCCccCCCCc-----ccccccccCc-eEEecC------CCCHHHHHHHHHcCCccccccccchhhhhH
Q 019284 154 DHVFVDEFSCIGCKNCNNVAPE-----VFKIEEDFGR-ARVYNQ------CGINEFVQQAIESCPVDCIHRTSAQQLSLL 221 (343)
Q Consensus 154 ~~vfVDe~~CigCg~C~~vaP~-----vF~~edd~G~-a~V~~q------~g~~e~~~eAv~~CPv~AI~~~~~~~l~~l 221 (343)
..+.+|...|++|+.|..+||. .+.+.++ |. ..+... ...-...-..+..||++||.+....
T Consensus 138 ~~i~~d~~kCi~Cg~Cv~~CP~~~~~~ai~~~~~-g~~~~i~~~~~~~i~~~~Ci~Cg~Cv~~CP~gAi~~~~~~----- 211 (574)
T 3c8y_A 138 KSLTVDRTKCLLCGRCVNACGKNTETYAMKFLNK-NGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEKSHM----- 211 (574)
T ss_dssp SSEEEEGGGCCCCCHHHHHHHHHHSCCCSEEEEE-TTEEEEESGGGCCGGGSSCCCCCHHHHHCSSTTEEECCCH-----
T ss_pred CcceeCcccCcCCCCccchhCchhcCCceeeccC-CccceecccccceechhhCCcchhHHHhhccCCccccccH-----
Confidence 3677899999999999999994 6666543 32 222110 0011123478899999999987642
Q ss_pred HHHHHHHH-hhccceeccCCCC--CCcchHHH
Q 019284 222 EDEMRRVE-RVNVAMMLSGMGS--GSADVFRM 250 (343)
Q Consensus 222 e~~~~~~~-~~~v~~~~~g~G~--~~~~~f~~ 250 (343)
+.++..+. .+.+++..+++|. +.++.|++
T Consensus 212 ~~v~~~l~~~~~~~v~~~ap~v~~s~ge~f~~ 243 (574)
T 3c8y_A 212 DRVKNALNAPEKHVIVAMAPSVRASIGELFNM 243 (574)
T ss_dssp HHHHHHHHCTTCEEEEEECGGGGGTGGGGGTC
T ss_pred HHHHHhhccccceeEEeeCCceeeechhhhcc
Confidence 33344444 3556665556555 33566643
No 50
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=95.64 E-value=0.0037 Score=59.07 Aligned_cols=65 Identities=23% Similarity=0.434 Sum_probs=43.8
Q ss_pred ccccccccccCCCCccCCCCc-ccccccccCceEEecCCCCHHHHH-----HHHHcCCccccccccchhhhhH
Q 019284 155 HVFVDEFSCIGCKNCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQ-----QAIESCPVDCIHRTSAQQLSLL 221 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~-vF~~edd~G~a~V~~q~g~~e~~~-----eAv~~CPv~AI~~~~~~~l~~l 221 (343)
.+.+|...|++|+.|...||. .+.++++.+.. ..=..-.+.+. ..+..||++||.+.+.+++..+
T Consensus 125 ~v~id~~~CigCg~C~~~CP~~ai~~~~~~~~~--~kC~~C~~r~~~g~~p~Cv~~CP~~Ai~~~~~~~~~~~ 195 (294)
T 1kqf_B 125 IVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRV--YKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLEL 195 (294)
T ss_dssp CEEECGGGCCCCCHHHHHCTTCCCEEETTTTEE--ECCCTTHHHHTTTCCCHHHHHCTTSCEEEEEHHHHHHH
T ss_pred ceEeCcccCCCcchhhhcCCCCCcEecCCCCCe--eeCCCccchhhcCccHHHHHhCCcCcEEEecHHHHHHH
Confidence 466788999999999999994 56665432322 11122222222 7899999999999887765444
No 51
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=95.29 E-value=0.0021 Score=48.00 Aligned_cols=71 Identities=18% Similarity=0.182 Sum_probs=43.8
Q ss_pred ccccccccC--CCCccCCCCc-ccccccccCceEEecCCCCHHHHHHHHHcCCccccccccchhhhhHHHHHHHHHhhcc
Q 019284 157 FVDEFSCIG--CKNCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLSLLEDEMRRVERVNV 233 (343)
Q Consensus 157 fVDe~~Cig--Cg~C~~vaP~-vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~~~l~~le~~~~~~~~~~v 233 (343)
++|...|++ |+.|..++|. .+.+++ +... +.... -..-...+..||++||.+.... .++++..+.++..
T Consensus 2 ~i~~~~C~~c~C~~C~~~CP~~ai~~~~--~~~~-~~~~~-C~~C~~C~~~CP~~Ai~~~~~~----~~~~~~~~~~d~~ 73 (78)
T 1h98_A 2 HVICEPCIGVKDQSCVEVCPVECIYDGG--DQFY-IHPEE-CIDCGACVPACPVNAIYPEEDV----PEQWKSYIEKNRK 73 (78)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECS--SSEE-ECTTT-CCCCCTHHHHCTTCCEEEGGGC----CGGGTHHHHHHHH
T ss_pred EEEchhCCCCCcChhhhhcCccceEcCC--CEEE-ECccc-CCcHhHHHHhCCccceEecccC----hHHHHHHHHHHHH
Confidence 467788999 9999999995 566654 4333 32210 0112357889999999975542 2334444555555
Q ss_pred ce
Q 019284 234 AM 235 (343)
Q Consensus 234 ~~ 235 (343)
||
T Consensus 74 fy 75 (78)
T 1h98_A 74 LA 75 (78)
T ss_dssp HT
T ss_pred hh
Confidence 54
No 52
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=95.27 E-value=0.0016 Score=64.61 Aligned_cols=58 Identities=28% Similarity=0.467 Sum_probs=37.9
Q ss_pred ccccccccccCCCCccCCCCc-ccccccccCceEEe-cCCCCHHHHHHHHHcCCcccccc-ccc
Q 019284 155 HVFVDEFSCIGCKNCNNVAPE-VFKIEEDFGRARVY-NQCGINEFVQQAIESCPVDCIHR-TSA 215 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~-vF~~edd~G~a~V~-~q~g~~e~~~eAv~~CPv~AI~~-~~~ 215 (343)
.+.+|...|++|+.|..+||. .+.+++ |....+ .. ..-...-.++..||++||.+ ...
T Consensus 27 ~i~~d~~kCi~Cg~C~~~CP~~ai~~~~--~~~~~i~~~-~~C~~Cg~C~~~CP~~Ai~~~~~~ 87 (421)
T 1hfe_L 27 FVQIDEAKCIGCDTCSQYCPTAAIFGEM--GEPHSIPHI-EACINCGQCLTHCPENAIYEAQSW 87 (421)
T ss_dssp SEEECTTTCCCCCHHHHHCTTCCCBCCT--TSCCBCCCG-GGCCCCCTTGGGCTTCCEEESCCC
T ss_pred eEEECcccCCCccHHHHhcCcCceeccc--ccceeecCh-hhCCchhhHHHhhCcCCccccccc
Confidence 567899999999999999995 344433 332222 21 00112235789999999998 443
No 53
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=95.23 E-value=0.0016 Score=55.57 Aligned_cols=63 Identities=21% Similarity=0.406 Sum_probs=41.9
Q ss_pred cccccccccCCC-----CccCCCCc-ccccccccCceEEecCCCCHHHHHHHHHcCCccccccccchhhh
Q 019284 156 VFVDEFSCIGCK-----NCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLS 219 (343)
Q Consensus 156 vfVDe~~CigCg-----~C~~vaP~-vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~~~l~ 219 (343)
+++|...|++|+ .|..+||. .+.++++.+...++... .-......+..||++||.+....++.
T Consensus 3 ~~vd~~~C~~C~~~~~~~C~~~CP~~ai~~~~~~~~~~~id~~-~C~~Cg~Cv~~CP~~AI~~~~~~~~~ 71 (150)
T 1jnr_B 3 SFVNPEKCDGCKALERTACEYICPNDLMTLDKEKMKAYNREPD-MCWECYSCVKMCPQGAIDVRGYVDYS 71 (150)
T ss_dssp EEECTTTCCSCCSSSSCHHHHHCTTSCEEEETTTTEEEESCGG-GCCCCCHHHHHCTTCCEEECCCTTTC
T ss_pred eEECcccCCCCCCcccccchhhcCccCeEEecCCceeeeeCcc-cCcCHhHHHHhCCccceEecCcchhh
Confidence 467888999999 99999995 56666542233333321 00112368899999999998765433
No 54
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=94.96 E-value=0.0026 Score=55.19 Aligned_cols=62 Identities=21% Similarity=0.375 Sum_probs=41.5
Q ss_pred cccccccccCCC-----CccCCCCc-ccccccccCceEEecCCCCHHHHHHHHHcCCccccccccchhh
Q 019284 156 VFVDEFSCIGCK-----NCNNVAPE-VFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQL 218 (343)
Q Consensus 156 vfVDe~~CigCg-----~C~~vaP~-vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~~~l 218 (343)
+.+|...|++|+ .|..+||. .+.++++.+...++... .-......+..||++||.+....++
T Consensus 2 v~id~~~C~gC~~c~~~~C~~~CP~~ai~~~~~~~~~~~~d~~-~C~~Cg~Cv~~CP~~Ai~~~~~~~~ 69 (166)
T 3gyx_B 2 TYVDPSKCDGCKGGEKTACMYICPNDLMILDPEEMKAFNQEPE-ACWECYSCIKICPQGAITARPYADF 69 (166)
T ss_dssp EEECTTTCCCCCSSSCCHHHHHCTTSCEEEETTTTEEEESCGG-GCCCCCHHHHHCSSCCEEECCCTTT
T ss_pred CEEcchhcCCCCCCCcchhHHhCCccccEEecCCceeEecCcc-cCcccChHhHhCCccceEEeccccc
Confidence 467889999999 99999995 56666542223323221 0011236889999999999876643
No 55
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=94.68 E-value=0.017 Score=45.51 Aligned_cols=55 Identities=24% Similarity=0.400 Sum_probs=37.2
Q ss_pred ccccccccCCC--CccCCCC-cccccccccCceEEecCCCCHHHHHHHHHcCCccccccccc
Q 019284 157 FVDEFSCIGCK--NCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (343)
Q Consensus 157 fVDe~~CigCg--~C~~vaP-~vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~ 215 (343)
++|...|++|+ .|..+|| +.+.+++ +...+... . -..-...+..||++||.+...
T Consensus 2 ~~~~~~C~~C~~~~C~~~CP~~ai~~~~--~~~~i~~~-~-C~~Cg~C~~~CP~~ai~~~~~ 59 (106)
T 7fd1_A 2 FVVTDNCIKCKYTDCVEVCPVDCFYEGP--NFLVIHPD-E-CIDCALCEPECPAQAIFSEDE 59 (106)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECS--SCEEECTT-T-CCCCCTTGGGCTTCCEEEGGG
T ss_pred eECccccCCccCcHHHHHcCccceEcCC--CcEEECcc-c-CCChhhhHHhCCChhhhcccc
Confidence 46788899999 9999999 4555554 33333222 0 011234789999999998875
No 56
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=94.56 E-value=0.035 Score=51.85 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=41.0
Q ss_pred ccccccccccCCCCccCCCCcc-cccccccCceEEecC-CCCHHHHH---------HHHHcCCccccccccchhh
Q 019284 155 HVFVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVYNQ-CGINEFVQ---------QAIESCPVDCIHRTSAQQL 218 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~v-F~~edd~G~a~V~~q-~g~~e~~~---------eAv~~CPv~AI~~~~~~~l 218 (343)
.+.+|...|++|+.|...||.. ..++++.+ +... .+-.+.+. ..++.||++||.+.+..+.
T Consensus 91 ~v~id~~~CigC~~C~~~CP~~Ai~~~~~~~---~~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~Ai~~~~~~dp 162 (274)
T 1ti6_B 91 IVLIDPEKAKGKKELLDTCPYGVMYWNEEEN---VAQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFLKTTPE 162 (274)
T ss_dssp CEEECTTTTTTCGGGGGGCSSCCCEEETTTT---EEECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEEEECHH
T ss_pred cEEechhhccchHHHHhhCccCCeEEEcccC---ccccCCCchhhhhhhccCCCCcchhhhCCcCceEEcCCCcH
Confidence 4678899999999999999953 34443212 1222 33333222 6789999999999887644
No 57
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=94.26 E-value=0.026 Score=49.97 Aligned_cols=59 Identities=22% Similarity=0.369 Sum_probs=39.7
Q ss_pred ccccccccccCCCCccCCCC-cccccccccCceEEecCCCCHHHHH-----HHHHcCCccccccccch
Q 019284 155 HVFVDEFSCIGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQ-----QAIESCPVDCIHRTSAQ 216 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP-~vF~~edd~G~a~V~~q~g~~e~~~-----eAv~~CPv~AI~~~~~~ 216 (343)
.+.+|...|++|+.|...|| +.+.++++.+ ...=.+-.+.+. ..++.||++||.+.+..
T Consensus 82 ~~~id~~~CigC~~C~~~CP~~Ai~~~~~~~---~~kC~~C~~~~~~g~~p~Cv~~CP~~Ai~~g~~~ 146 (195)
T 2vpz_B 82 LVLVDPKKCIACGACIAACPYDARYLHPAGY---VSKCTFCAHRLEKGKVPACVETCPTYCRTFGDLE 146 (195)
T ss_dssp CEEECTTTCCCCCHHHHHCTTCCCEECTTSS---EECCCTTHHHHHTTCCCHHHHSCTTCCEEEEETT
T ss_pred ceeecCCCCCCcChhHhhCCCCCeEECCCCC---CccCcCcchHHhCCCCchhHhhCCcccEEEeccc
Confidence 46678889999999999999 4566665423 111122222222 58899999999987554
No 58
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.19 E-value=0.0074 Score=65.96 Aligned_cols=60 Identities=20% Similarity=0.445 Sum_probs=42.4
Q ss_pred cccccccccccCCCCccCCCC----cccccccccCceEEecCCCCHHHHHHHHHcCCc-cccccccch
Q 019284 154 DHVFVDEFSCIGCKNCNNVAP----EVFKIEEDFGRARVYNQCGINEFVQQAIESCPV-DCIHRTSAQ 216 (343)
Q Consensus 154 ~~vfVDe~~CigCg~C~~vaP----~vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv-~AI~~~~~~ 216 (343)
..+.+|...|++|+.|..+|| +.+.++++ +...++.. .......++..||+ +||.++...
T Consensus 944 ~~~~id~~~C~~Cg~C~~~CP~~~~~ai~~~~~-~~~~~~~~--~C~~Cg~C~~~CP~~~Ai~~~~~~ 1008 (1025)
T 1gte_A 944 VVAVIDEEMCINCGKCYMTCNDSGYQAIQFDPE-THLPTVTD--TCTGCTLCLSVCPIIDCIRMVSRT 1008 (1025)
T ss_dssp EEEEECTTTCCCCCHHHHHHHHHSCSCEEECTT-TCCEEECT--TCCCCCHHHHHCSSTTTEEEEECC
T ss_pred ceEEEEcccCcccCHHHHhcCccccCCEEEeCC-CceEEeCc--cCCChhHHHhhCCCCCCEEEecCc
Confidence 345689999999999999999 67777654 22233322 11223468899999 999987653
No 59
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=93.00 E-value=0.099 Score=35.75 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=32.0
Q ss_pred cccccCCCCccCCCCcc-cccccccCceEEecCCCCHHHHHHHHHcCCccccccc
Q 019284 160 EFSCIGCKNCNNVAPEV-FKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRT 213 (343)
Q Consensus 160 e~~CigCg~C~~vaP~v-F~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~ 213 (343)
...|++|+.|...+|.. +.+++ +...+... . -..-...+..||++||.++
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~~--~~~~~~~~-~-C~~C~~C~~~CP~~ai~~~ 55 (55)
T 2fdn_A 5 NEACISCGACEPECPVNAISSGD--DRYVIDAD-T-CIDCGACAGVCPVDAPVQA 55 (55)
T ss_dssp CTTCCCCCTTGGGCTTCCEECCS--SSCEECTT-T-CCCCCHHHHTCTTCCEEEC
T ss_pred cccCcChhhHHHHCCccccCcCC--CEEEeccc-c-CcChhChHHHccccceecC
Confidence 56799999999999954 45544 33322221 0 0112357889999999863
No 60
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=92.79 E-value=0.035 Score=43.48 Aligned_cols=55 Identities=16% Similarity=0.224 Sum_probs=35.9
Q ss_pred ccccccccCC--CCccCCCC-cccccccccCceEEecCCCCHHHHHHHHHcCCccccccccc
Q 019284 157 FVDEFSCIGC--KNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (343)
Q Consensus 157 fVDe~~CigC--g~C~~vaP-~vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~ 215 (343)
++|...|++| +.|..++| +.+.+++ +.. ++.... -..-...+..||++||.+...
T Consensus 2 ~i~~~~C~~C~c~~C~~~CP~~ai~~~~--~~~-~~~~~~-C~~Cg~C~~~CP~~Ai~~~~~ 59 (105)
T 2v2k_A 2 YVIAEPCVDVKDKACIEECPVDCIYEGA--RML-YIHPDE-CVDCGACEPVCPVEAIYYEDD 59 (105)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEECS--SCE-EECTTT-CCCCCCSGGGCTTCCEEEGGG
T ss_pred EEecccCCCCCcChhhhhcCccccCcCC--CcE-EEeCCc-CcchhhHHHhCCccCEEecCC
Confidence 4677889988 99999999 4566654 332 232210 001224678999999998754
No 61
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=92.41 E-value=0.013 Score=50.29 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=33.1
Q ss_pred ccccccCCCCccCCCCcc-cccccccC-------------ceEEecCCCCHHHHHHHHHcCCccccccccc
Q 019284 159 DEFSCIGCKNCNNVAPEV-FKIEEDFG-------------RARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (343)
Q Consensus 159 De~~CigCg~C~~vaP~v-F~~edd~G-------------~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~ 215 (343)
|...|++|+.|..+||.. +.++.+.. ....+.. ..-......+..||++||.+...
T Consensus 49 d~~~Ci~C~~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~C~~C~~C~~~CP~~Ai~~~~~ 118 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINM-LRCIFCGLCEEACPTGAIVLGYD 118 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEEEEECCCSSSCSSSSSCEEEEEEEET-TTCCCCCHHHHHCSSSCEEECSC
T ss_pred CCccCcccccchhhCCcccEEeecccccccccccccccccceeecCC-CcCcChhChhhhCCccceEecCc
Confidence 567899999999999942 33322100 0111111 11112236889999999998754
No 62
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=91.79 E-value=0.059 Score=52.26 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=38.8
Q ss_pred ccccccccccCCCCccCCCCcc-cccccccCceEEecC-CCCHHHHH-----HHHHcCCccccccccchh
Q 019284 155 HVFVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVYNQ-CGINEFVQ-----QAIESCPVDCIHRTSAQQ 217 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~v-F~~edd~G~a~V~~q-~g~~e~~~-----eAv~~CPv~AI~~~~~~~ 217 (343)
.+.+|...|++|+.|..+||.. +.+++..+. ... ..-.+.+. ..+..||++||.+.+..+
T Consensus 176 ~v~id~~kCigCg~Cv~aCP~~Ai~~~~~~~~---~~kC~~C~~r~~~g~~paCv~~CP~~Ai~~g~~~d 242 (352)
T 2ivf_B 176 IVLVDQERCKGHRHCVEACPYKAIYFNPVSQT---SEKCILCYPRIEKGIANACNRQCPGRVRAFGYLDD 242 (352)
T ss_dssp CEEECTTTCCCCCHHHHHCTTCCEEEETTTTE---EEECCTTHHHHTTTBCCHHHHTCTTCCEEEEETTC
T ss_pred eEEechhhcCCchHHHhhcCccceeccccccc---ccccCCCcchhhcCCCChHHHhcCccceeccccch
Confidence 4667888899999999999853 333332121 111 22333333 688999999999976654
No 63
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=90.90 E-value=0.061 Score=48.23 Aligned_cols=64 Identities=9% Similarity=0.128 Sum_probs=42.1
Q ss_pred cccccccccc--CCCCccCCCCc-ccccccccCceEEecC-CCCHHHHH-----HHHHcCCccccccccchhhhhH
Q 019284 155 HVFVDEFSCI--GCKNCNNVAPE-VFKIEEDFGRARVYNQ-CGINEFVQ-----QAIESCPVDCIHRTSAQQLSLL 221 (343)
Q Consensus 155 ~vfVDe~~Ci--gCg~C~~vaP~-vF~~edd~G~a~V~~q-~g~~e~~~-----eAv~~CPv~AI~~~~~~~l~~l 221 (343)
.+.+|...|+ +|+.|...||. .+.++++.+. ... .+-.+.+. ..+..||++||.+.+..++..+
T Consensus 100 ~v~id~~~C~~~~C~~C~~~CP~~Ai~~~~~~~~---~~kC~~C~~~~~~G~~p~Cv~~CP~~Ai~~~~~~~~~~~ 172 (214)
T 1h0h_B 100 CVLFTPKTKDLEDYESVISACPYDVPRKVAESNQ---MAKCDMCIDRITNGLRPACVTSCPTGAMNFGDLSEMEAM 172 (214)
T ss_dssp CEEECGGGGGCSCHHHHHHHCTTCCCEECTTSSC---EECCCTTHHHHTTTCCCHHHHHCSSSCEEEEEHHHHHHH
T ss_pred eEEEeHHHCccccccHHHHhcCCCCeEecCCCcc---cCcCCCCcchhhcCCChhHHHhcCcccEEEccHHHHHHH
Confidence 4667888999 99999999984 3444443221 111 33333322 6789999999999887765543
No 64
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=90.58 E-value=0.027 Score=59.92 Aligned_cols=62 Identities=24% Similarity=0.334 Sum_probs=38.9
Q ss_pred cccccccccccCCCCccCCCCc-----ccccccccCceEEecCC--CCHHHHHHHHHcCCccccccccc
Q 019284 154 DHVFVDEFSCIGCKNCNNVAPE-----VFKIEEDFGRARVYNQC--GINEFVQQAIESCPVDCIHRTSA 215 (343)
Q Consensus 154 ~~vfVDe~~CigCg~C~~vaP~-----vF~~edd~G~a~V~~q~--g~~e~~~eAv~~CPv~AI~~~~~ 215 (343)
..+.+|...||+|+.|+.+|++ .+.+.++-....+.... .+....-..++.||++||+....
T Consensus 172 p~i~~d~~~CI~C~~Cv~~C~~~~~~~~i~~~~~g~~~~i~~~~~~~~C~~CG~Cv~vCP~gAl~~~~~ 240 (783)
T 3i9v_3 172 PFVILDRERCIHCKRCVRYFEEVPGDEVLDFIERGVHTFIGTMDFGLPSGFSGNITDICPVGALLDLTA 240 (783)
T ss_dssp TTEEECTTTCCCCCHHHHHHHHTTCCCCCEECSCTTSCCEECSSTTCCSTTTTTHHHHCSSSSEEEGGG
T ss_pred ccEEEchhhCCCccHHHHHhhhhcCCceeeeecCCCccEEccCCCCCCCccchhHHhhcccCceecccc
Confidence 3566799999999999999964 23333321222222211 12234456899999999986543
No 65
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=82.56 E-value=0.72 Score=47.52 Aligned_cols=46 Identities=7% Similarity=0.071 Sum_probs=36.5
Q ss_pred CCCchhhcCCCCCCCH--HHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHH
Q 019284 69 ADDYYAVLGLLPDATP--EQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAV 122 (343)
Q Consensus 69 ~~d~Y~iLGv~~~as~--~eIK~AYr~la~~~HPDk~~~~~~a~~~f~~I~eAY~v 122 (343)
..|||.+||++.+... .+|+++||++++..+++ .+++..|..|+.|
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 3459999999766554 67999999999977664 4678888888876
No 66
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=82.49 E-value=0.36 Score=49.02 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=34.8
Q ss_pred ccccccccccCCCCccCCCCcc-cccccccCceEEecCCCCHHHHH-----HHHHcCCccccccc
Q 019284 155 HVFVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVYNQCGINEFVQ-----QAIESCPVDCIHRT 213 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~v-F~~edd~G~a~V~~q~g~~e~~~-----eAv~~CPv~AI~~~ 213 (343)
.+.+|...|++|+.|..+||.. ..++.+.+....- .+--+.+. ..+..||++||.+.
T Consensus 209 ~v~id~~kCigCg~Cv~~CP~~AI~~~~~~~~~~kC--~~Cg~ri~~G~~P~Cv~~CP~~Ai~~g 271 (512)
T 1q16_B 209 IVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKC--IFCYPRIEAGQPTVCSETCVGRIRYLG 271 (512)
T ss_dssp CEEECTTTCCCCCCHHHHCTTCCEEEETTTTEEEEC--CTTHHHHTTTCCCHHHHTCTTCCEEEE
T ss_pred eEEECHHHCCCchHHHhhCCccceecccCCCCcccC--cCCCchhhcCCCCceEeeCchhhhhcc
Confidence 4567888899999999999853 3333321211110 12122222 68899999999866
No 67
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=74.78 E-value=0.47 Score=53.01 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=37.8
Q ss_pred cccccccccCCCCccCCCCccc-cc---ccc--------c-----------Cc--eEEecCCCCHHHHHHHHHcCCc--c
Q 019284 156 VFVDEFSCIGCKNCNNVAPEVF-KI---EED--------F-----------GR--ARVYNQCGINEFVQQAIESCPV--D 208 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~vF-~~---edd--------~-----------G~--a~V~~q~g~~e~~~eAv~~CPv--~ 208 (343)
..+|...|++|+.|..+||..- .+ +++ + |. ...+.. .+....-.++..||+ .
T Consensus 681 p~~d~~kCi~Cg~Cv~vCP~~AI~~~~~~~~e~~~ap~g~~~~~~~~k~~~g~~~~~~v~~-~~C~gCG~Cv~vCP~~~~ 759 (1231)
T 2c42_A 681 PQWVPENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINT-LDCMGCGNCADICPPKEK 759 (1231)
T ss_dssp EEECTTTCCCCCHHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECT-TTCCCCCHHHHHCSSSSC
T ss_pred eEEeCccCCchhhHHHhCCcccccccccchHHHhhCcccccccccccccccccccceeech-hhCCChhHHHhhCCCCcc
Confidence 3458899999999999999751 11 110 0 10 111221 111223478899999 9
Q ss_pred ccccccchh
Q 019284 209 CIHRTSAQQ 217 (343)
Q Consensus 209 AI~~~~~~~ 217 (343)
||.+....+
T Consensus 760 AI~~~~~~~ 768 (1231)
T 2c42_A 760 ALVMQPLDT 768 (1231)
T ss_dssp SEEEEEGGG
T ss_pred CeEEecchh
Confidence 999987763
No 68
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=66.76 E-value=4.4 Score=35.40 Aligned_cols=59 Identities=22% Similarity=0.273 Sum_probs=37.6
Q ss_pred ccccccccccCCC--CccCCCCcc-cccccccCceEEecCCCCHHHHHHHHHcCCccccccccch
Q 019284 155 HVFVDEFSCIGCK--NCNNVAPEV-FKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQ 216 (343)
Q Consensus 155 ~vfVDe~~CigCg--~C~~vaP~v-F~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~~ 216 (343)
.+.++...|++|+ .|..+||.. +.++++ |... +.... -..-...+..||.+||.+....
T Consensus 50 ~~~~~~~~C~~C~~p~C~~~CP~gAi~~~~~-g~~~-id~~~-CigC~~C~~~CP~~Ai~~~~~~ 111 (195)
T 2vpz_B 50 VVEFRPEQCLHCENPPCVPVCPTGASYQTKD-GLVL-VDPKK-CIACGACIAACPYDARYLHPAG 111 (195)
T ss_dssp EEEEEEEECCCCSSCTTTTTCSSSCEEECTT-SCEE-ECTTT-CCCCCHHHHHCTTCCCEECTTS
T ss_pred eEEECcccCcCccCcHHHHhcCCCceecccc-ccee-ecCCC-CCCcChhHhhCCCCCeEECCCC
Confidence 4566788899999 699999954 334332 5433 33210 0112357789999999987543
No 69
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=63.91 E-value=1.6 Score=44.19 Aligned_cols=59 Identities=19% Similarity=0.176 Sum_probs=37.0
Q ss_pred ccccccccccCCC--CccCCCCcc-cccccccCceEEecCCCCHHHHHHHHHcCCccccccccc
Q 019284 155 HVFVDEFSCIGCK--NCNNVAPEV-FKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (343)
Q Consensus 155 ~vfVDe~~CigCg--~C~~vaP~v-F~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~ 215 (343)
.+.++...|++|+ .|..+||.. +.+..+.|... +.+.. -......+..||.+||.+...
T Consensus 176 ~i~~~~~~C~~C~~~~Cv~aCP~gAI~~~~~~g~v~-id~~k-CigCg~Cv~~CP~~AI~~~~~ 237 (512)
T 1q16_B 176 FMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVL-IDQDK-CRGWRMCITGCPYKKIYFNWK 237 (512)
T ss_dssp CCEEEEECCCCCSSCHHHHTCTTCCEEEETTTCCEE-ECTTT-CCCCCCHHHHCTTCCEEEETT
T ss_pred eEEecCccCcCCCCchhhhhCCcCcEEeecCCCeEE-ECHHH-CCCchHHHhhCCccceecccC
Confidence 4566888999999 599999953 33432225433 33211 111235678999999998643
No 70
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=57.88 E-value=1.2 Score=43.03 Aligned_cols=60 Identities=22% Similarity=0.325 Sum_probs=38.4
Q ss_pred cccccccccccCCC--CccCCCCcc-cccccccCceEEecCCCCHHHHHHHHHcCCccccccccc
Q 019284 154 DHVFVDEFSCIGCK--NCNNVAPEV-FKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSA 215 (343)
Q Consensus 154 ~~vfVDe~~CigCg--~C~~vaP~v-F~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~ 215 (343)
..++++...|++|+ .|..+||.. +..+++.|.. ++...- -......+..||.+||.+...
T Consensus 142 ~~~~~~~~~C~~C~~~~Cv~~CP~gAi~~~~~~g~v-~id~~k-CigCg~Cv~aCP~~Ai~~~~~ 204 (352)
T 2ivf_B 142 PFFFYLARMCNHCTNPACLAACPTGAIYKREDNGIV-LVDQER-CKGHRHCVEACPYKAIYFNPV 204 (352)
T ss_dssp EECEEEEECCCCCSSCHHHHHCTTCCEEECTTTCCE-EECTTT-CCCCCHHHHHCTTCCEEEETT
T ss_pred eEEEECCCCCcCcCCccccccCCCCceeecCCCCeE-Eechhh-cCCchHHHhhcCccceecccc
Confidence 35667888999999 899999953 3333322443 333211 111236789999999998653
No 71
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=55.34 E-value=5.4 Score=40.47 Aligned_cols=62 Identities=15% Similarity=0.097 Sum_probs=39.0
Q ss_pred ccccc-ccccc------cCCCCccCCCCc-cccc-ccccC-c-eEEecCCCCHHHHHHHHHcCCccccccccch
Q 019284 154 DHVFV-DEFSC------IGCKNCNNVAPE-VFKI-EEDFG-R-ARVYNQCGINEFVQQAIESCPVDCIHRTSAQ 216 (343)
Q Consensus 154 ~~vfV-De~~C------igCg~C~~vaP~-vF~~-edd~G-~-a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~~ 216 (343)
.++.+ |...| ..|+.|..+||. ++++ +++.| . ..++...... ..-.+...||+++|.|+.+.
T Consensus 502 ~hl~~~d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~~~~~~i~~~~Ci-~C~~C~~~cp~~~i~~~~p~ 574 (584)
T 2gmh_A 502 AHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCV-HCKTCDIKDPSQNINWVVPE 574 (584)
T ss_dssp CSEEESSTTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTTCEEEEECGGGCC-CCCHHHHHCTTCCEEECCCS
T ss_pred CeEEEcCcccchhhchhhhcchhhhcCChhhEEEeecCCCCceEEEEeCCCCc-CCCCchhhCCCCCceeECCC
Confidence 35544 66778 899999999994 5666 43225 1 2233322111 23357788999999998653
No 72
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=54.24 E-value=4.4 Score=31.25 Aligned_cols=22 Identities=23% Similarity=0.612 Sum_probs=18.2
Q ss_pred ccccccccccCCCCccCCCCcc
Q 019284 155 HVFVDEFSCIGCKNCNNVAPEV 176 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~v 176 (343)
.+.++...|++||.|..+||..
T Consensus 31 ~~~i~~~~C~~Cg~C~~~CP~~ 52 (106)
T 7fd1_A 31 FLVIHPDECIDCALCEPECPAQ 52 (106)
T ss_dssp CEEECTTTCCCCCTTGGGCTTC
T ss_pred cEEECcccCCChhhhHHhCCCh
Confidence 3557888899999999999953
No 73
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=53.66 E-value=4.9 Score=35.58 Aligned_cols=57 Identities=18% Similarity=0.333 Sum_probs=35.6
Q ss_pred ccccccccCCCC--ccCCCC---c-ccccccccCceEEecCCCCHH--HHHHHHHcCCccccccccc
Q 019284 157 FVDEFSCIGCKN--CNNVAP---E-VFKIEEDFGRARVYNQCGINE--FVQQAIESCPVDCIHRTSA 215 (343)
Q Consensus 157 fVDe~~CigCg~--C~~vaP---~-vF~~edd~G~a~V~~q~g~~e--~~~eAv~~CPv~AI~~~~~ 215 (343)
..+...|.+|+. |..+|| . .+..+++.|...+..+ .-. .-...+..||.+||.+...
T Consensus 66 ~~~~~~C~~C~~p~C~~~CP~~~~gAi~~~~~~g~v~id~~--~C~~~~C~~C~~~CP~~Ai~~~~~ 130 (214)
T 1h0h_B 66 LFFPDQCRHCIAPPCKATADMEDESAIIHDDATGCVLFTPK--TKDLEDYESVISACPYDVPRKVAE 130 (214)
T ss_dssp EEEEECCCCCSSCHHHHHHTTTCTTSEEECTTTCCEEECGG--GGGCSCHHHHHHHCTTCCCEECTT
T ss_pred eecCCcCcCcCCchhhccCCccccccEEecCCCCeEEEeHH--HCccccccHHHHhcCCCCeEecCC
Confidence 346678999997 999999 3 2333322254333221 111 3456788999999998653
No 74
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=51.30 E-value=3.6 Score=39.96 Aligned_cols=21 Identities=29% Similarity=0.744 Sum_probs=16.2
Q ss_pred ccccccccccCCCCccCCCCc
Q 019284 155 HVFVDEFSCIGCKNCNNVAPE 175 (343)
Q Consensus 155 ~vfVDe~~CigCg~C~~vaP~ 175 (343)
.+.+|...|++||.|..+||.
T Consensus 250 ~v~id~~~Ci~Cg~C~~~CP~ 270 (386)
T 3or1_B 250 SVAINNDRCMYCGNCYTMCPA 270 (386)
T ss_dssp EEEECTTTCCCCCHHHHHCTT
T ss_pred ccccCCCcCCccccHHHhCcH
Confidence 366777788888888888885
No 75
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=50.69 E-value=2.9 Score=43.05 Aligned_cols=22 Identities=36% Similarity=0.875 Sum_probs=19.1
Q ss_pred CcccccccccccCCCCccCCCC
Q 019284 153 KDHVFVDEFSCIGCKNCNNVAP 174 (343)
Q Consensus 153 ~~~vfVDe~~CigCg~C~~vaP 174 (343)
....++.|..|+|||.|+.-||
T Consensus 45 ~~~~~i~~~~c~~~~~~~~~cp 66 (608)
T 3j16_B 45 SKIAFISEILCIGCGICVKKCP 66 (608)
T ss_dssp TTEEEECTTTCCCCCHHHHHCS
T ss_pred CCceEEehhhccccccccccCC
Confidence 3456789999999999999998
No 76
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=48.58 E-value=4.1 Score=40.14 Aligned_cols=36 Identities=22% Similarity=0.551 Sum_probs=25.2
Q ss_pred cccccccccccCCCCccCCCCcccccccccCceEEe
Q 019284 154 DHVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVY 189 (343)
Q Consensus 154 ~~vfVDe~~CigCg~C~~vaP~vF~~edd~G~a~V~ 189 (343)
..+.+|...|++|+.|...||.......+.|....+
T Consensus 277 ~~~~id~~~Ci~Cg~Ci~~CP~~~~~~~~~g~~I~v 312 (418)
T 3mm5_A 277 KELTIDNRECVRCMHCINKMPKALKPGDERGATILI 312 (418)
T ss_dssp SCEEECTTTCCCCCHHHHHCTTTEECCSSEEEEEEE
T ss_pred ceeEEChhhcCccChhHHhCcHhhccCCCCCeEEEE
Confidence 356678899999999999999864443343544444
No 77
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=46.11 E-value=6.7 Score=30.02 Aligned_cols=59 Identities=15% Similarity=0.222 Sum_probs=32.0
Q ss_pred cccccccccCCCCccCCCCcc-cccccccCceEEecCCCCHHHHHHHHHcCCccccccccch
Q 019284 156 VFVDEFSCIGCKNCNNVAPEV-FKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQ 216 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~v-F~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~~ 216 (343)
+.+|...|++|+.|..++|.. ..+... ....+... -..+...--..+||..++.+.+..
T Consensus 32 ~~~~~~~C~~Cg~C~~~CP~~Ai~~~~~-~~~~~~~~-~~~d~~~~~~~~~~~ga~~~g~~~ 91 (105)
T 2v2k_A 32 LYIHPDECVDCGACEPVCPVEAIYYEDD-VPDQWSSY-AQANADFFAELGSPGGASKVGQTD 91 (105)
T ss_dssp EEECTTTCCCCCCSGGGCTTCCEEEGGG-CCGGGTTH-HHHHHHTTTTTCCCSCHHHHCSCS
T ss_pred EEEeCCcCcchhhHHHhCCccCEEecCC-ChHHHHHH-HHhchHHHhhcCCCcceEEeecCC
Confidence 557888999999999999964 333321 10001100 000111111267888888776443
No 78
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=45.02 E-value=6.1 Score=36.76 Aligned_cols=55 Identities=16% Similarity=0.417 Sum_probs=35.3
Q ss_pred cccccccccCCC--CccCCCCc--ccccccccCceEEecC--CCCHHHHHHHHHcCCccccccccc
Q 019284 156 VFVDEFSCIGCK--NCNNVAPE--VFKIEEDFGRARVYNQ--CGINEFVQQAIESCPVDCIHRTSA 215 (343)
Q Consensus 156 vfVDe~~CigCg--~C~~vaP~--vF~~edd~G~a~V~~q--~g~~e~~~eAv~~CPv~AI~~~~~ 215 (343)
+.++...|++|+ .|..+||. .+...++ |...+... .+ -...+..||.+||.+...
T Consensus 93 ~~~~~~~C~~C~~~~C~~~CP~~gAi~~~~~-g~v~id~~~Cig----Cg~C~~~CP~~ai~~~~~ 153 (294)
T 1kqf_B 93 WLIRKDGCMHCEDPGCLKACPSAGAIIQYAN-GIVDFQSENCIG----CGYCIAGCPFNIPRLNKE 153 (294)
T ss_dssp EEEEEESCCCBSSCHHHHHCCSTTSEEEETT-SCEEECGGGCCC----CCHHHHHCTTCCCEEETT
T ss_pred EEECcccCCCcCChhhhhhCCccCccccccc-cceEeCcccCCC----cchhhhcCCCCCcEecCC
Confidence 345667899999 79999995 4444332 54333222 22 235778899999997653
No 79
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=38.95 E-value=5.2 Score=38.45 Aligned_cols=24 Identities=29% Similarity=0.674 Sum_probs=20.4
Q ss_pred CcccccccccccCCCCccCCCCcc
Q 019284 153 KDHVFVDEFSCIGCKNCNNVAPEV 176 (343)
Q Consensus 153 ~~~vfVDe~~CigCg~C~~vaP~v 176 (343)
...+.+|...|++||.|...||..
T Consensus 231 ~~~~~id~~~C~~Cg~C~~~CP~~ 254 (366)
T 3mm5_B 231 NKTIKVDVEKCMYCGNCYTMCPGM 254 (366)
T ss_dssp TTEEEECGGGCCCCCHHHHHCTTC
T ss_pred CCeEEEehhhCCCcchHHHhCCHh
Confidence 346778999999999999999973
No 80
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=38.69 E-value=3.9 Score=37.82 Aligned_cols=56 Identities=16% Similarity=0.360 Sum_probs=35.6
Q ss_pred cccccccccCCCC--ccCCCCcccccccccCceEEecCCCCHHHHHHHHHcCCcccccccc
Q 019284 156 VFVDEFSCIGCKN--CNNVAPEVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTS 214 (343)
Q Consensus 156 vfVDe~~CigCg~--C~~vaP~vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~ 214 (343)
+......|.+|+. |..+||..+..+++ |.. ++.+.- -..-...+..||.+||.+..
T Consensus 61 ~~~~~~~C~~C~~p~C~~~CP~Ai~~~~~-g~v-~id~~~-CigC~~C~~~CP~~Ai~~~~ 118 (274)
T 1ti6_B 61 INYRPTPCMHCENAPCVAKGNGAVYQRED-GIV-LIDPEK-AKGKKELLDTCPYGVMYWNE 118 (274)
T ss_dssp EEEEEECCCCCTTCHHHHHTTTSEEECTT-SCE-EECTTT-TTTCGGGGGGCSSCCCEEET
T ss_pred eeEcCCcCCCCCChHHHhhChHHhhhccC-CcE-Eechhh-ccchHHHHhhCccCCeEEEc
Confidence 4456678999999 99999983323322 543 333311 11234577899999998864
No 81
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=36.63 E-value=8 Score=38.35 Aligned_cols=37 Identities=24% Similarity=0.565 Sum_probs=26.9
Q ss_pred cccccccccccCCCCccCCCCcccccccccCceEEec
Q 019284 154 DHVFVDEFSCIGCKNCNNVAPEVFKIEEDFGRARVYN 190 (343)
Q Consensus 154 ~~vfVDe~~CigCg~C~~vaP~vF~~edd~G~a~V~~ 190 (343)
..+.+|...|+.|+.|..+||..-...++-|....+.
T Consensus 294 ~~l~Id~~~C~~Cg~Ci~~CP~al~~~~~~G~~ilvG 330 (437)
T 3or1_A 294 GTLSIDNKNCTRCMHCINTMPRALKIGDERGASILVG 330 (437)
T ss_dssp TEEEECGGGCCCCSHHHHHCTTTEECCSSEEEEEEEC
T ss_pred CEEEEccccCCchhhhHhhCcHhhccCCCCceEEEEe
Confidence 3567899999999999999998654444435555443
No 82
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=34.21 E-value=6.1 Score=33.11 Aligned_cols=21 Identities=24% Similarity=0.570 Sum_probs=17.5
Q ss_pred cccccccccCCCCccCCCCcc
Q 019284 156 VFVDEFSCIGCKNCNNVAPEV 176 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~v 176 (343)
+.++...|++|+.|..+||..
T Consensus 91 ~~~~~~~C~~C~~C~~~CP~~ 111 (182)
T 3i9v_9 91 YEINMLRCIFCGLCEEACPTG 111 (182)
T ss_dssp EEEETTTCCCCCHHHHHCSSS
T ss_pred eecCCCcCcChhChhhhCCcc
Confidence 346778899999999999954
No 83
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=33.16 E-value=9.2 Score=35.01 Aligned_cols=86 Identities=16% Similarity=0.263 Sum_probs=50.5
Q ss_pred cCCCCccCCCC-cccccccccCceEEecCCCCHHHHHHHHHcCCccccccccchhhhhHHHHHHHHHhhccceeccCCCC
Q 019284 164 IGCKNCNNVAP-EVFKIEEDFGRARVYNQCGINEFVQQAIESCPVDCIHRTSAQQLSLLEDEMRRVERVNVAMMLSGMGS 242 (343)
Q Consensus 164 igCg~C~~vaP-~vF~~edd~G~a~V~~q~g~~e~~~eAv~~CPv~AI~~~~~~~l~~le~~~~~~~~~~v~~~~~g~G~ 242 (343)
.+|+.|...|| +++.+++ +...+... .........+..|| .||.+....+- -++...+.|-.
T Consensus 174 ~~C~~C~~~CP~g~I~id~--~~~v~~d~-~~C~~C~~C~~vCp-~aI~~~~~~d~-------------~i~~VEt~Gsl 236 (265)
T 2pa8_D 174 ANCEKAVNVCPEGVFELKD--GKLSVKNE-LSCTLCEECLRYCN-GSIRISFVEDK-------------YILEIESVGSL 236 (265)
T ss_dssp SCCTTHHHHCTTCCEEEET--TEEEESCG-GGCCCCCHHHHHHT-TSEEEEEEEEE-------------EEEEEEECSSS
T ss_pred hhHHHHHHhCcccCeEecC--CeeEEecc-ccCCCchHHHHhCC-CceEEEecCCe-------------EEEEeccCCCC
Confidence 78999999998 4567765 44333321 00001224566799 89987654310 01111244445
Q ss_pred CCcchHHHHHHHHHhhHHHHHHHH
Q 019284 243 GSADVFRMASSRWERRQAKVLEQA 266 (343)
Q Consensus 243 ~~~~~f~~a~~~~~~~~~~~~~~~ 266 (343)
+..+.+..|...++.....+.+..
T Consensus 237 ~Pee~v~~A~~iL~~~~~~~~~~l 260 (265)
T 2pa8_D 237 KPERILLEAGKSIIRKIEELEKKL 260 (265)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 668888888877777776655543
No 84
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=30.72 E-value=8.5 Score=42.98 Aligned_cols=20 Identities=30% Similarity=1.117 Sum_probs=17.4
Q ss_pred cccccccccCCCCccCCCCc
Q 019284 156 VFVDEFSCIGCKNCNNVAPE 175 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~ 175 (343)
+.++...|++||.|..+||.
T Consensus 737 ~~v~~~~C~gCG~Cv~vCP~ 756 (1231)
T 2c42_A 737 IQINTLDCMGCGNCADICPP 756 (1231)
T ss_dssp EEECTTTCCCCCHHHHHCSS
T ss_pred eeechhhCCChhHHHhhCCC
Confidence 34677889999999999997
No 85
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=29.99 E-value=8.9 Score=31.94 Aligned_cols=21 Identities=19% Similarity=0.438 Sum_probs=17.7
Q ss_pred cccccccccCCCCccCCCCcc
Q 019284 156 VFVDEFSCIGCKNCNNVAPEV 176 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~v 176 (343)
+.+|...|++|+.|..+||..
T Consensus 40 ~~id~~~C~~Cg~Cv~~CP~~ 60 (150)
T 1jnr_B 40 YNREPDMCWECYSCVKMCPQG 60 (150)
T ss_dssp EESCGGGCCCCCHHHHHCTTC
T ss_pred eeeCcccCcCHhHHHHhCCcc
Confidence 456788899999999999953
No 86
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=28.06 E-value=19 Score=35.14 Aligned_cols=18 Identities=33% Similarity=0.711 Sum_probs=16.2
Q ss_pred ccccccCCCCccCCCCcc
Q 019284 159 DEFSCIGCKNCNNVAPEV 176 (343)
Q Consensus 159 De~~CigCg~C~~vaP~v 176 (343)
|...|++||.|..+||..
T Consensus 62 ~~~~C~~Cg~C~~~CP~~ 79 (421)
T 1hfe_L 62 HIEACINCGQCLTHCPEN 79 (421)
T ss_dssp CGGGCCCCCTTGGGCTTC
T ss_pred ChhhCCchhhHHHhhCcC
Confidence 788899999999999954
No 87
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=26.39 E-value=11 Score=31.87 Aligned_cols=21 Identities=19% Similarity=0.528 Sum_probs=17.5
Q ss_pred cccccccccCCCCccCCCCcc
Q 019284 156 VFVDEFSCIGCKNCNNVAPEV 176 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~v 176 (343)
+.+|...|++|+.|..+||..
T Consensus 39 ~~~d~~~C~~Cg~Cv~~CP~~ 59 (166)
T 3gyx_B 39 FNQEPEACWECYSCIKICPQG 59 (166)
T ss_dssp EESCGGGCCCCCHHHHHCSSC
T ss_pred EecCcccCcccChHhHhCCcc
Confidence 346778899999999999854
No 88
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=26.38 E-value=18 Score=32.04 Aligned_cols=21 Identities=24% Similarity=0.646 Sum_probs=17.1
Q ss_pred cccccccccCCCCccCCCCcc
Q 019284 156 VFVDEFSCIGCKNCNNVAPEV 176 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~v 176 (343)
+..+...|+.||.|..+||..
T Consensus 142 ~~~~~~~Ci~Cg~C~~~CP~~ 162 (238)
T 2wdq_B 142 KLDGLYECILCACCSTSCPSF 162 (238)
T ss_dssp TTTTTTTCCCCCTTGGGCHHH
T ss_pred HHhccccccccCCchhhCcCC
Confidence 345677899999999999854
No 89
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=26.28 E-value=28 Score=32.33 Aligned_cols=17 Identities=29% Similarity=0.933 Sum_probs=14.4
Q ss_pred ccccCCCCccCCCCccc
Q 019284 161 FSCIGCKNCNNVAPEVF 177 (343)
Q Consensus 161 ~~CigCg~C~~vaP~vF 177 (343)
..||.||.|...||-.-
T Consensus 180 ~~CI~CG~C~~aCP~~~ 196 (282)
T 3vr8_B 180 YECILCACCSASCPSYW 196 (282)
T ss_pred hhCcccCcCcccCCcee
Confidence 45999999999999653
No 90
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=25.72 E-value=16 Score=33.40 Aligned_cols=26 Identities=23% Similarity=0.475 Sum_probs=20.1
Q ss_pred cccccccccCCCCccCCCCccccccc
Q 019284 156 VFVDEFSCIGCKNCNNVAPEVFKIEE 181 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~vF~~ed 181 (343)
+.+|...|++|+.|..+||..+.+..
T Consensus 196 v~~d~~~C~~C~~C~~vCp~aI~~~~ 221 (265)
T 2pa8_D 196 SVKNELSCTLCEECLRYCNGSIRISF 221 (265)
T ss_dssp EESCGGGCCCCCHHHHHHTTSEEEEE
T ss_pred EEeccccCCCchHHHHhCCCceEEEe
Confidence 34577889999999999996565544
No 91
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=25.62 E-value=19 Score=32.42 Aligned_cols=19 Identities=26% Similarity=0.688 Sum_probs=15.5
Q ss_pred cccccccCCCCccCCCCcc
Q 019284 158 VDEFSCIGCKNCNNVAPEV 176 (343)
Q Consensus 158 VDe~~CigCg~C~~vaP~v 176 (343)
.+...|++||.|..+||..
T Consensus 153 ~~~~~Ci~CG~C~~~CP~~ 171 (252)
T 2h88_B 153 DGLYECILCACCSTSCPSY 171 (252)
T ss_dssp TTTTTCCCCCTTGGGCHHH
T ss_pred HhHHhchhhCcchhhCCCC
Confidence 3456799999999999964
No 92
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=23.63 E-value=14 Score=38.02 Aligned_cols=21 Identities=33% Similarity=0.738 Sum_probs=17.0
Q ss_pred cccccccccccCCCCccCCCC
Q 019284 154 DHVFVDEFSCIGCKNCNNVAP 174 (343)
Q Consensus 154 ~~vfVDe~~CigCg~C~~vaP 174 (343)
...++.|..|+|||.|..-||
T Consensus 60 ~~~~i~e~~c~gc~~~~~~~p 80 (607)
T 3bk7_A 60 YKPIIQEASCTGCGICVHKCP 80 (607)
T ss_dssp TEEEECTTTCCCCCHHHHHCS
T ss_pred CcceeeecccCccccccCCCC
Confidence 456678899999999986665
No 93
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=21.36 E-value=14 Score=32.93 Aligned_cols=21 Identities=24% Similarity=0.621 Sum_probs=17.5
Q ss_pred cccccccccCCCCccCCCCcc
Q 019284 156 VFVDEFSCIGCKNCNNVAPEV 176 (343)
Q Consensus 156 vfVDe~~CigCg~C~~vaP~v 176 (343)
+..+...|++||.|..+||..
T Consensus 141 ~~~~~~~Ci~Cg~C~~~CP~~ 161 (243)
T 1kf6_B 141 KYHQFSGCINCGLCYAACPQF 161 (243)
T ss_dssp TTGGGGCCCCCCHHHHHCHHH
T ss_pred HhhhhhhccccCccccccCCC
Confidence 446778899999999999864
Done!