BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019286
(343 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 132/208 (63%), Gaps = 4/208 (1%)
Query: 137 RPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM 196
+P H P+ PE HLG F+LR+LQ A++ FS NI+G GG+G VY+G+L
Sbjct: 4 KPQDHFFDVPAEED--PEV-HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 197 NGTAVAVKKLLNNPGQA-DKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNG 255
+GT VAVK+L Q + F+ EVE I H+NL+RL G+C+ T+R+LVY Y+ NG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 256 NLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFD 315
++ LR + L W R +I LG+A+ LAYLH+ +PK++HRD+K++NIL+DE F+
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 316 AKISDFGLAKLLGAGKSHITTRVMGTFG 343
A + DFGLAKL+ H+ V GT G
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIG 208
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 125/197 (63%), Gaps = 2/197 (1%)
Query: 148 PLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLL 207
P PE HLG F+LR+LQ A++ F NI+G GG+G VY+G+L +G VAVK+L
Sbjct: 5 PAEEDPEV-HLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLK 63
Query: 208 NNPGQA-DKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC 266
Q + F+ EVE I H+NL+RL G+C+ T+R+LVY Y+ NG++ LR
Sbjct: 64 EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE 123
Query: 267 DRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
+ L W R +I LG+A+ LAYLH+ +PK++HRD+K++NIL+DE F+A + DFGLAKL
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 327 LGAGKSHITTRVMGTFG 343
+ H+ V G G
Sbjct: 184 MDYKDXHVXXAVRGXIG 200
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 4/179 (2%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIG 225
L DL+ ATN F +IG G +G VY+G L +G VA+K+ Q ++F E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
RH +LV L+G+C E + IL+Y+Y+ NGNL++ L G ++WE R++I +G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL-LGAGKSHITTRVMGTFG 343
L YLH ++HRD+KS NIL+DENF KI+DFG++K G++H+ V GT G
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 4/179 (2%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIG 225
L DL+ ATN F +IG G +G VY+G L +G VA+K+ Q ++F E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
RH +LV L+G+C E + IL+Y+Y+ NGNL++ L G ++WE R++I +G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL-LGAGKSHITTRVMGTFG 343
L YLH ++HRD+KS NIL+DENF KI+DFG++K ++H+ V GT G
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 111/193 (57%), Gaps = 20/193 (10%)
Query: 162 HWFTLRDLQSATNRFSKD------NIIGDGGYGVVYRGQLMNGTAVAVKKLLN----NPG 211
H F+ +L++ TN F + N +G+GG+GVVY+G +N T VAVKKL
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 71
Query: 212 QADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY- 270
+ + F E++ + +H+NLV LLG+ +G LVY Y+ NG+L L C G
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS---CLDGTP 128
Query: 271 -LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
L+W R KI G A + +LHE +HRDIKS+NIL+DE F AKISDFGLA+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 330 -GKSHITTRVMGT 341
++ + +R++GT
Sbjct: 186 FAQTVMXSRIVGT 198
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 110/193 (56%), Gaps = 20/193 (10%)
Query: 162 HWFTLRDLQSATNRFSKD------NIIGDGGYGVVYRGQLMNGTAVAVKKLLN----NPG 211
H F+ +L++ TN F + N +G+GG+GVVY+G +N T VAVKKL
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 71
Query: 212 QADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY- 270
+ + F E++ + +H+NLV LLG+ +G LVY Y+ NG+L L C G
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS---CLDGTP 128
Query: 271 -LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
L+W R KI G A + +LHE +HRDIKS+NIL+DE F AKISDFGLA+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 330 -GKSHITTRVMGT 341
++ + R++GT
Sbjct: 186 FAQTVMXXRIVGT 198
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 102/176 (57%), Gaps = 19/176 (10%)
Query: 162 HWFTLRDLQSATNRFSKD------NIIGDGGYGVVYRGQLMNGTAVAVKKLLN----NPG 211
H F+ +L++ TN F + N +G+GG+GVVY+G +N T VAVKKL
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 65
Query: 212 QADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY- 270
+ + F E++ + +H+NLV LLG+ +G LVY Y+ NG+L L C G
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS---CLDGTP 122
Query: 271 -LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
L+W R KI G A + +LHE +HRDIKS+NIL+DE F AKISDFGLA+
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR 175
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 20/193 (10%)
Query: 162 HWFTLRDLQSATNRFSKD------NIIGDGGYGVVYRGQLMNGTAVAVKKLLN----NPG 211
H F+ +L++ TN F + N G+GG+GVVY+G +N T VAVKKL
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTE 62
Query: 212 QADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY- 270
+ + F E++ +H+NLV LLG+ +G LVY Y NG+L L C G
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS---CLDGTP 119
Query: 271 -LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
L+W R KI G A + +LHE +HRDIKS+NIL+DE F AKISDFGLA+
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 330 GKSHI-TTRVMGT 341
+ +R++GT
Sbjct: 177 FAQXVXXSRIVGT 189
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + N L+ EN K+SDFG+ + +
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFV 151
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + N L+ EN K+SDFG+ + +
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFV 153
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---SVIHR 127
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + N L+ EN K+SDFG+ + +
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFV 153
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + N L+ EN K+SDFG+ + +
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFV 156
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + ++ DF E E + + H LV+L G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV+E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + N L+ EN K+SDFG+ + +
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFV 173
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G+V+ G +N VA+K + +++DF E E + + H LV+L G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
LV E++ +G L +LR RG E + + L + +AYL EA V+HR
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + N L+ EN K+SDFG+ + +
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFV 154
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK--DFRVEVEAIGHVRHKNLVRLLGYC 239
IG G +G V+R + +G+ VAVK L+ A++ +F EV + +RH N+V +G
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ +V EY++ G+L + L R L R+ + AK + YLH P +V
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKL 326
HRD+KS N+L+D+ + K+ DFGL++L
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK--DFRVEVEAIGHVRHKNLVRLLGYC 239
IG G +G V+R + +G+ VAVK L+ A++ +F EV + +RH N+V +G
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ +V EY++ G+L + L R L R+ + AK + YLH P +V
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKL 326
HR++KS N+L+D+ + K+ DFGL++L
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 18/159 (11%)
Query: 182 IGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N VAVK L + A KDF E E + +++H+++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDR---------GYLTWEARMKILLGTAKA 286
G C+EG I+V+EY+ +G+L ++LR D LT + I A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL VHRD+ + N L+ EN KI DFG+++
Sbjct: 141 MVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGLA++L
Sbjct: 172 DLAARNILINSNLVCKVSDFGLARVL 197
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNP----GQADKDFRVEVEAIGHVRHKN 231
+ + IIG GG+G VYR + G VAVK ++P Q ++ R E + ++H N
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARMKILLGTAKALAYL 290
++ L G C++ LV E+ G L + L G L W ++ A+ + YL
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYL 121
Query: 291 H-EAIEPKVVHRDIKSSNILI---DENFD-----AKISDFGLAK 325
H EAI P ++HRD+KSSNILI EN D KI+DFGLA+
Sbjct: 122 HDEAIVP-IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 20/186 (10%)
Query: 164 FTLRDLQSATNRFSKD---------NIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNP 210
FT D A F+K+ +IG G +G V G L VA+K L +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 211 GQADK-DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+ + DF E +G H N++ L G + T +++ E++ NG+L+ +LR + G
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN---DG 130
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
T + +L G A + YL + VHRD+ + NIL++ N K+SDFGL++ L
Sbjct: 131 QFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 330 GKSHIT 335
S T
Sbjct: 188 DTSDPT 193
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTYVDPHTYEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGL+++L
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 8 GNGHLKLPGLRTYVDPHTYEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 55
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 56 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 115
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 116 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 169
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGL+++L
Sbjct: 170 DLAARNILINSNLVCKVSDFGLSRVL 195
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQL----MNGTAVAVKKL-LNNPGQADK 215
G FT R+++++ R + IIG G G V G+L VA+K L + +
Sbjct: 39 GRSFT-REIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR 95
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
DF E +G H N++RL G G ++V EY+ NG+L+ +LR G T
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR---THDGQFTIMQ 152
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ +L G + YL + VHRD+ + N+L+D N K+SDFGL+++L
Sbjct: 153 LVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQL----MNGTAVAVKKL-LNNPGQADK 215
G FT R+++++ R + IIG G G V G+L VA+K L + +
Sbjct: 39 GRSFT-REIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR 95
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
DF E +G H N++RL G G ++V EY+ NG+L+ +LR G T
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR---THDGQFTIMQ 152
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ +L G + YL + VHRD+ + N+L+D N K+SDFGL+++L
Sbjct: 153 LVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GFVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGL+++L
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTYVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGL+++L
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTYEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGL+++L
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGL+++L
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM 162
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM 163
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 179 DNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLV 233
+ +IG G +G V RG+L + VA+K L + + +F E +G H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G +++ E++ NG L+ +LR + G T + +L G A + YL E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIASGMRYLAEM 137
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
VHRD+ + NIL++ N K+SDFGL++ L S T
Sbjct: 138 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM 163
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 179 DNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLV 233
+ +IG G +G V RG+L + VA+K L + + +F E +G H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G +++ E++ NG L+ +LR + G T + +L G A + YL E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIASGMRYLAEM 135
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
VHRD+ + NIL++ N K+SDFGL++ L S T
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM 161
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM 162
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V EY+ NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGL ++L
Sbjct: 172 DLAARNILINSNLVCKVSDFGLGRVL 197
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM 166
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM 163
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM 165
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM 174
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 24/180 (13%)
Query: 164 FTLRDLQSATNRFSKD---------NIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNP 210
FT D A F+K+ +IG G +G V G+L VA+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL--KA 67
Query: 211 GQADK---DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCD 267
G DK DF E +G H N++ L G + +++ EY+ NG+L+ +LR +
Sbjct: 68 GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN--- 124
Query: 268 RGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
G T + +L G + YL + VHRD+ + NIL++ N K+SDFG++++L
Sbjct: 125 DGRFTVIQLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
+V EY+ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRE--CNRE----EVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM 180
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGH 226
ATN S D ++G G +G V G+L +VA+K L + + +DF E +G
Sbjct: 32 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H N++RL G + ++V EY+ NG+L+ +LR T + +L G A
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASG 147
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ YL + VHRD+ + NILI+ N K+SDFGL+++L
Sbjct: 148 MKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 185
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 12/161 (7%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGH 226
ATN S D ++G G +G V G+L +VA+K L + + +DF E +G
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H N++RL G + ++V EY+ NG+L+ +LR T + +L G A
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASG 130
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ YL + VHRD+ + NILI+ N K+SDFGL+++L
Sbjct: 131 MKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 165 TLRDLQSATNRFSKD---------NIIGDGGYGVVYRGQLM----NGTAVAVKKL-LNNP 210
T D A ++F+K+ +IG G +G V G+L AVA+K L +
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
+ +DF E +G H N+V L G G ++V E++ NG L+ +LR G
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH---DGQ 141
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
T + +L G A + YL + VHRD+ + NIL++ N K+SDFGL++++
Sbjct: 142 FTVIQLVGMLRGIAAGMRYLADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 331 KSHITTRVMG 340
+ T G
Sbjct: 199 PEAVYTTTGG 208
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD+ + N L+ EN K++DFGL++L+
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM 159
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 177 SKDNIIGDGGYGVVYRGQLMNGT-----AVAVKKLLNNPGQADK---DFRVEVEAIGHVR 228
++ +IG G +G VY+G L + VA+K L G +K DF E +G
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEAGIMGQFS 104
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N++RL G + +++ EY+ NG L+++LR G + + +L G A +
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMK 161
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
YL VHRD+ + NIL++ N K+SDFGL+++L
Sbjct: 162 YLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI 164
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 103/185 (55%), Gaps = 25/185 (13%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLL--NNPGQAD-----KDFRVEVEA 223
A N + IG GG+G+V++G+L+ + + VA+K L+ ++ G+ + ++F+ EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILLG 282
+ ++ H N+V+L G + R +V E+V G+L L D+ + + W +++++L
Sbjct: 77 MSNLNHPNIVKLYG-LMHNPPR-MVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLD 130
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNIL---IDENFD--AKISDFGLAKLLGAGKSHITTR 337
A + Y+ P +VHRD++S NI +DEN AK++DFGL++ H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG 185
Query: 338 VMGTF 342
++G F
Sbjct: 186 LLGNF 190
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRE--CNRQ----EVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
R++ + N L+ EN K++DFGL++L+
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLM 368
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI 164
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTA------VAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N + VAVK L + A KDF+ E E + +++H+++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLTWEARMKILLGT 283
G C +G I+V+EY+ +G+L ++LR D +G L + I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A + YL VHRD+ + N L+ N KI DFG+++
Sbjct: 143 ASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 70
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 125
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLI 153
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTFVDPHTFEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V E + NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GAVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGL+++L
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI 164
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 129 GNG--KVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGG 186
GNG K+ R P T P + EF+ ++L ATN S D ++G G
Sbjct: 10 GNGHLKLPGLRTYVDPHTYEDPTQTVHEFA----------KELD-ATN-ISIDKVVGAGE 57
Query: 187 YGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G V G+L +VA+K L + + +DF E +G H N++RL G +
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++V E + NG+L+ +LR T + +L G A + YL + VHR
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHR 171
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + NILI+ N K+SDFGL+++L
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI 164
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 327 EPPFYIITEFMTYGNLLDYLR--ECNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
R++ + N L+ EN K++DFGL++L+
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLM 407
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI 164
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 72
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLI 155
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G YG VY G + K L ++F E + ++H NLV+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-VVH 300
++ E++ GNL +LR C+R E +LL A ++ E +E K +H
Sbjct: 285 EPPFYIITEFMTYGNLLDYLR--ECNRQ----EVNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
R++ + N L+ EN K++DFGL++L+
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLM 365
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 11/161 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
IG+G YGVVY+ Q G A+KK+ + G R E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+ +LV+E+++ +L++ L D+C+ G + A+ LL +AY H+ +V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAK-SFLLQLLNGIAYCHDR---RV 121
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+HRD+K N+LI+ + KI+DFGLA+ G T V+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 11/161 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
IG+G YGVVY+ Q G A+KK+ + G R E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+ +LV+E+++ +L++ L D+C+ G + A+ LL +AY H+ +V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAK-SFLLQLLNGIAYCHDR---RV 121
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+HRD+K N+LI+ + KI+DFGLA+ G T V+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
IG+G YGVVY+ Q G A+KK+ + G R E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+ +LV+E+++ +L++ L D+C+ G + A+ LL +AY H+ +V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLL--DVCEGGLESVTAK-SFLLQLLNGIAYCHDR---RV 121
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+HRD+K N+LI+ + KI+DFGLA+ G
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI 164
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY+N G+L +L+G+ YL + + A +AY+ V
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGK--YLRLPQLVDMSAQIASGMAYVERM---NYV 133
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI 161
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY+N G+L +L+G+ YL + + A +AY+ V
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGK--YLRLPQLVDMSAQIASGMAYVERM---NYV 133
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI 161
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLI 164
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 18/159 (11%)
Query: 185 GGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQ 244
G +G V++ QL+N VAVK Q+ ++ EV ++ ++H+N+++ +G GT
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 245 ----RILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI------ 294
L+ + G+L +L+ ++ ++W I A+ LAYLHE I
Sbjct: 93 VDVDLWLITAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 295 -EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
+P + HRDIKS N+L+ N A I+DFGLA AGKS
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD+ ++NIL+ EN K++DFGLA+L+
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLI 164
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 102/185 (55%), Gaps = 25/185 (13%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLL--NNPGQAD-----KDFRVEVEA 223
A N + IG GG+G+V++G+L+ + + VA+K L+ ++ G+ + ++F+ EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILLG 282
+ ++ H N+V+L G + R +V E+V G+L L D+ + + W +++++L
Sbjct: 77 MSNLNHPNIVKLYG-LMHNPPR-MVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLD 130
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNIL---IDENFD--AKISDFGLAKLLGAGKSHITTR 337
A + Y+ P +VHRD++S NI +DEN AK++DFG ++ H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSG 185
Query: 338 VMGTF 342
++G F
Sbjct: 186 LLGNF 190
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 102/185 (55%), Gaps = 25/185 (13%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLL--NNPGQAD-----KDFRVEVEA 223
A N + IG GG+G+V++G+L+ + + VA+K L+ ++ G+ + ++F+ EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILLG 282
+ ++ H N+V+L G + R +V E+V G+L L D+ + + W +++++L
Sbjct: 77 MSNLNHPNIVKLYG-LMHNPPR-MVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLD 130
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNIL---IDENFD--AKISDFGLAKLLGAGKSHITTR 337
A + Y+ P +VHRD++S NI +DEN AK++DF L++ H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSG 185
Query: 338 VMGTF 342
++G F
Sbjct: 186 LLGNF 190
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+M YL + + A +AY+ V
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 303
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGL +L+
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLI 331
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 37/183 (20%)
Query: 176 FSKDNI-----IGDGGYGVVYRGQ------LMNGTAVAVKKLLNNPGQAD--KDFRVEVE 222
+ ++NI IG+G +G V++ + T VAVK +L AD DF+ E
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVK-MLKEEASADMQADFQREAA 102
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR------------GDMCDRGY 270
+ + N+V+LLG C G L++EY+ G+L ++LR D+ R
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 271 --------LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
L+ ++ I A +AYL E K VHRD+ + N L+ EN KI+DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFG 219
Query: 323 LAK 325
L++
Sbjct: 220 LSR 222
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+ YL + + A +AY+ V
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 385
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI 413
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 12/161 (7%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKL-LNNPGQADKDFRVEVEAIGH 226
ATN S D ++G G +G V G+L +VA+K L + + +DF E +G
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
H N++RL G + ++V E + NG+L+ +LR T + +L G A
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASG 130
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ YL + VHRD+ + NILI+ N K+SDFGL+++L
Sbjct: 131 MKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 182 IGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N VAVK L A +DF+ E E + ++H+++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARMKILLGTAKALAYLHEAI 294
G C EG ++V+EY+ +G+L ++LR D L E LG + LA +
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 295 EPKV-------VHRDIKSSNILIDENFDAKISDFGLAK 325
V VHRD+ + N L+ + KI DFG+++
Sbjct: 169 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 112 FNNLEKDVVGSQLGEEGGNGKVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQS 171
FN+L++ V +G +++T P+S P T L W R+
Sbjct: 139 FNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQT-----------QGLAKDAWEIPRE--- 184
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHK 230
+ +G G +G V+ G T VA+K L PG + F E + + +RH+
Sbjct: 185 ---SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHE 239
Query: 231 NLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
LV+L Y + + I +V EY++ G+L +L+G+ YL + + A +AY
Sbjct: 240 KLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAY 295
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ VHRD++++NIL+ EN K++DFGLA+L+
Sbjct: 296 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 330
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 112 FNNLEKDVVGSQLGEEGGNGKVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQS 171
FN+L++ V +G +++T P+S P T L W R+
Sbjct: 139 FNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQT-----------QGLAKDAWEIPRE--- 184
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHK 230
+ +G G +G V+ G T VA+K L PG + F E + + +RH+
Sbjct: 185 ---SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHE 239
Query: 231 NLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
LV+L Y + + I +V EY++ G+L +L+G+ YL + + A +AY
Sbjct: 240 KLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAY 295
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ VHRD++++NIL+ EN K++DFGLA+L+
Sbjct: 296 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 330
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+ YL + + A +AY+ V
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLI 154
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + K+++ + + FR EV + RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK------ILLGTAKALAYLHEAIE 295
I+ QW G + E + + I TA+ + YLH
Sbjct: 104 DNLAIVT----------QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK-- 151
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
++HRD+KS+NI + E KI DFGLA +
Sbjct: 152 -NIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G T VA+K L PG + F E + + +RH+ LV+L Y +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY++ G+L +L+G+ YL + + A +AY+ V
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAYVERM---NYV 129
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++++NIL+ EN K++DFGLA+L+
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLI 157
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 182 IGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N VAVK L A +DF+ E E + ++H+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARMKILLGTAKALAYLHEAI 294
G C EG ++V+EY+ +G+L ++LR D L E LG + LA +
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 295 EPKV-------VHRDIKSSNILIDENFDAKISDFGLAK 325
V VHRD+ + N L+ + KI DFG+++
Sbjct: 146 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 182 IGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V+ + N VAVK L A +DF+ E E + ++H+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARMKILLGTAKALAYLHEAI 294
G C EG ++V+EY+ +G+L ++LR D L E LG + LA +
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 295 EPKV-------VHRDIKSSNILIDENFDAKISDFGLAK 325
V VHRD+ + N L+ + KI DFG+++
Sbjct: 140 AGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 20/177 (11%)
Query: 165 TLRDLQSATNRFSKD---------NIIGDGGYGVVYRGQLM----NGTAVAVKKL-LNNP 210
T D A + F+K+ +IG G +G V G+L VA+K L +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
+ +DF E +G H N++ L G + ++V EY+ NG+L+ +L+ + G
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN---DGQ 120
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
T + +L G + + YL + VHRD+ + NILI+ N K+SDFGL+++L
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 174
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 112 FNNLEKDVVGSQLGEEGGNGKVSTFRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQS 171
FN+L++ V +G +++T P+S P T L W R+
Sbjct: 139 FNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQT-----------QGLAKDAWEIPRE--- 184
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHK 230
+ +G G +G V+ G T VA+K L PG + F E + + +RH+
Sbjct: 185 ---SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHE 239
Query: 231 NLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
LV+L Y + + I +V EY++ G+L +L+G+ YL + + A +AY
Sbjct: 240 KLVQL--YAVVSEEPIYIVGEYMSKGSLLDFLKGETGK--YLRLPQLVDMAAQIASGMAY 295
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ VHRD++++NIL+ EN K++DFGLA+L+
Sbjct: 296 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 330
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 179 DNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVRHKN 231
+ +IG G +G V G+L VA+K L G DK DF E +G H N
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++ L G + +++ EY+ NG+L+ +LR + G T + +L G + YL
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN---DGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ VHRD+ + NIL++ N K+SDFG++++L
Sbjct: 128 DM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 179 DNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVRHKN 231
+ +IG G +G V G+L VA+K L G DK DF E +G H N
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++ L G + +++ EY+ NG+L+ +LR + G T + +L G + YL
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN---DGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ VHRD+ + NIL++ N K+SDFG++++L
Sbjct: 134 DM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVL 166
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 32/205 (15%)
Query: 144 TAPSP-LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM------ 196
TA +P L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 56 TADTPMLAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGCFGQVVMAEAVGIDKDK 109
Query: 197 --NGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYV 252
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY
Sbjct: 110 PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
Query: 253 NNGNLEQWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ GNL ++LR + +T++ + A+ + YL K +H
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 226
Query: 301 RDIKSSNILIDENFDAKISDFGLAK 325
RD+ + N+L+ EN KI+DFGLA+
Sbjct: 227 RDLAARNVLVTENNVMKIADFGLAR 251
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 112
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 113 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 164
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 165 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G V G G VAVK + N+ + F E + +RH NLV+LLG +E
Sbjct: 20 IGKGEFGDVMLGD-YRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ +V EY+ G+L +LR R L + +K L +A+ YL VH
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 131
Query: 301 RDIKSSNILIDENFDAKISDFGLAK 325
RD+ + N+L+ E+ AK+SDFGL K
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 179 DNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLV 233
+ +IG G +G V G L VA+K L + + + DF E +G H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
L G + T +++ E++ NG+L+ +LR + G T + +L G A + YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
VHR + + NIL++ N K+SDFGL++ L S T
Sbjct: 129 ---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 167
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 154 EFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQA 213
EF GW +++L+ IG G +G V G G VAVK + N+
Sbjct: 10 EFYRSGWA--LNMKELKLL-------QTIGKGEFGDVMLGD-YRGNKVAVKCIKND--AT 57
Query: 214 DKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLT 272
+ F E + +RH NLV+LLG +E + +V EY+ G+L +LR R L
Sbjct: 58 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLG 115
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +K L +A+ YL VHRD+ + N+L+ E+ AK+SDFGL K
Sbjct: 116 GDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 111
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 112 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 163
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 164 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 92
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 93 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 144
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 145 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 154 EFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQA 213
EF GW +++L+ IG G +G V G G VAVK + N+
Sbjct: 182 EFYRSGWA--LNMKELKLL-------QTIGKGEFGDVMLGD-YRGNKVAVKCIKND--AT 229
Query: 214 DKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLT 272
+ F E + +RH NLV+LLG +E + +V EY+ G+L +LR R L
Sbjct: 230 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLG 287
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +K L +A+ YL VHRD+ + N+L+ E+ AK+SDFGL K
Sbjct: 288 GDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 85
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 86 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 137
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 138 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 91
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 92 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 143
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 144 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 93
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 145
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 146 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G V G G VAVK + N+ + F E + +RH NLV+LLG +E
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ +V EY+ G+L +LR R L + +K L +A+ YL VH
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 125
Query: 301 RDIKSSNILIDENFDAKISDFGLAK 325
RD+ + N+L+ E+ AK+SDFGL K
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 90
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 91 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 142
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 143 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 24/169 (14%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRV------EVEA 223
+ ++ ++G+G YG+V + + + G VA+KK L ++D D V E++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFL----ESDDDKMVKKIAMREIKL 77
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNN---GNLEQWLRGDMCDRGYLTWEARMKIL 280
+ +RH+NLV LL C + + LV+E+V++ +LE + G L ++ K L
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-------LDYQVVQKYL 130
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ + H ++HRDIK NIL+ ++ K+ DFG A+ L A
Sbjct: 131 FQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 88
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 89 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 140
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 141 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 93
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 145
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 146 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 92
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 93 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 144
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ YL K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 145 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 173
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------A 128
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 181 IIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
++G G YG+VY G+ L N +A+K++ + + E+ H++HKN+V+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 240 IEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
E + E V G+L LR G + D +IL G L YLH+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLHDN--- 141
Query: 297 KVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTF 342
++VHRDIK N+LI+ KISDFG +K L AG + T GT
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTL 187
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 128
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 16 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 133
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 134 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 175
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 138 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 179
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 16 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 181 IIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
++G G YG+VY G+ L N +A+K++ + + E+ H++HKN+V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
E + E V G+L LR G + D +IL G L YLH+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLHDN--- 127
Query: 297 KVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHITTRVMGTF 342
++VHRDIK N+LI+ KISDFG +K L AG + T GT
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTL 173
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 152
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 153 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 194
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 122 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 16 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 152
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 153 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 204
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +L K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 205 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 16 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 16 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 16 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 98
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 99 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 150
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +L K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 151 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 94
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 95 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 146
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +L K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 147 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 94
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 95 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 146
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +L K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 147 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 93
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 145
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +L K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 146 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 91
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 92 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 143
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +L K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 144 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 24/159 (15%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
+ +IG G +G VY G L++ AVK L + + G+ + F E + H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNV 93
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG----TAKA 286
+ LLG C+ EG+ ++V Y+ +G+L ++R + T +K L+G AK
Sbjct: 94 LSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNE-------THNPTVKDLIGFGLQVAKG 145
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +L K VHRD+ + N ++DE F K++DFGLA+
Sbjct: 146 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 3 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVT 56
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTAR 173
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 174 NVLVTENNVMKIADFGLAR 192
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 5 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVT 58
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 175
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 176 NVLVTENNVMKIADFGLAR 194
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 8 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVT 61
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 178
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 179 NVLVTENNVMKIADFGLAR 197
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
+ ++G G +G VY+G + VA+K L G +A+ +F E + +
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGYLTWEARMKILLGTA 284
H +LVRLLG C+ T + LV + + +G L +++ + ++ + L W ++ A
Sbjct: 98 DHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------A 150
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
K + YL E ++VHRD+ + N+L+ KI+DFGLA+LL
Sbjct: 151 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 190
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 175 RFSKDNIIGDGGYGVVYRGQ--LMNGTAVAVKKLLNNPGQAD---KDFRVEVEAIGHVRH 229
R+ + +G GG VY + ++N VA+K + P + + K F EV + H
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILN-IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
+N+V ++ E LV EY+ L +++ G L+ + + T + L
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES----HGPLSVDTAINF---TNQILDG 123
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+ A + ++VHRDIK NILID N KI DFG+AK L T V+GT
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGT 175
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 86
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 141
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLI 168
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 16 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN +I+DFGLA+
Sbjct: 187 NVLVTENNVMRIADFGLAR 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 85
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 140
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLI 167
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 87
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 142
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLI 169
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 83
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLI 165
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
+ ++G G +GVV + + VA+K++ + K F VE+ + V H N+V+L G
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK- 297
C+ LV EY G+L L G Y T M L ++ +AYLH +++PK
Sbjct: 71 CLNPV--CLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLH-SMQPKA 126
Query: 298 VVHRDIKSSNILIDENFDA-KISDFGLA 324
++HRD+K N+L+ KI DFG A
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEA 223
R + + ++ F +++G+G YGVV G VA+KK+ + P A + R E++
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKI 62
Query: 224 IGHVRHKNLVRLLGY----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
+ H +H+N++ + E + + + + +L + + M ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----F 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ T +A+ LH + V+HRD+K SN+LI+ N D K+ DFGLA+++
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEA 223
R + + ++ F +++G+G YGVV G VA+KK+ + P A + R E++
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKI 62
Query: 224 IGHVRHKNLVRLLGY----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
+ H +H+N++ + E + + + + +L + + M ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----F 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ T +A+ LH + V+HRD+K SN+LI+ N D K+ DFGLA+++
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 28/183 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVK--KLLNNPGQADKDFRVEVEAIGHV 227
S++++F + +G+G Y VY+G G VA+K KL + G R E+ + +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKEL 60
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNN-----------GNLEQWLRGDMCDRGYLTWEAR 276
+H+N+VRL + LV+E+++N GN + L ++ Y W+
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK--YFQWQL- 117
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
+ LA+ HE K++HRD+K N+LI++ K+ DFGLA+ G + ++
Sbjct: 118 -------LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167
Query: 337 RVM 339
V+
Sbjct: 168 EVV 170
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 124
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 125 EGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 166
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEA 223
R + + ++ F +++G+G YGVV G VA+KK+ + P A + R E++
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKI 62
Query: 224 IGHVRHKNLVRLLGY----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
+ H +H+N++ + E + + + + +L + + M ++ +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----F 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ T +A+ LH + V+HRD+K SN+LI+ N D K+ DFGLA+++
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
+ ++G G +GVV + + VA+K++ + K F VE+ + V H N+V+L G
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK- 297
C+ LV EY G+L L G Y T M L ++ +AYLH +++PK
Sbjct: 70 CLNPV--CLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLH-SMQPKA 125
Query: 298 VVHRDIKSSNILIDENFDA-KISDFGLA 324
++HRD+K N+L+ KI DFG A
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 180 NIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
I G +G V++ QLMN VAVK Q+ + R E+ + ++H+NL++ +
Sbjct: 21 EIKARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSER-EIFSTPGMKHENLLQFIAAE 78
Query: 240 IEGT----QRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI- 294
G+ + L+ + + G+L +L+G++ +TW + ++ L+YLHE +
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 295 -------EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
+P + HRD KS N+L+ + A ++DFGLA GK
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGK 177
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 83
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLI 165
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 79
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLI 161
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 82
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 137
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLI 164
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 78
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 133
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLI 160
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 19/157 (12%)
Query: 180 NIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLV 233
++G G +G VY+G + VA+K L G +A+ +F E + + H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGYLTWEARMKILLGTAKALAYL 290
RLLG C+ T + LV + + +G L +++ + ++ + L W ++ AK + YL
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 133
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
E ++VHRD+ + N+L+ KI+DFGLA+LL
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 167
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 72
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLI 154
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 153 PEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQ 212
P + LG+G W ++ F K+ +G G +GVV G+ VA+K ++
Sbjct: 9 PSTAGLGYGSW----EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSM 61
Query: 213 ADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT 272
++ +F E + + ++ H+ LV+L G C + ++ EY+ NG L +LR +M R
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EM--RHRFQ 118
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ +++ +A+ YL + +HRD+ + N L+++ K+SDFGL++ +
Sbjct: 119 TQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++ G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+ +L +A+K+ E + V
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 161
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 162 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 153 PEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQ 212
P + LG+G W ++ F K+ +G G +GVV G+ VA+K ++
Sbjct: 9 PSTAGLGYGSW----EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSM 61
Query: 213 ADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT 272
++ +F E + + ++ H+ LV+L G C + ++ EY+ NG L +LR +M R
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EM--RHRFQ 118
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ +++ +A+ YL + +HRD+ + N L+++ K+SDFGL++ +
Sbjct: 119 TQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++ G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLL-GYC 239
+GDG +G VY+ Q + +A K+++ + + +D+ VE++ + H N+V+LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLHEAIEPKV 298
E IL+ E+ G ++ M + E++++++ T AL YLH+ K+
Sbjct: 105 YENNLWILI-EFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 299 VHRDIKSSNILIDENFDAKISDFGLA 324
+HRD+K+ NIL + D K++DFG++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLL-GYC 239
+GDG +G VY+ Q + +A K+++ + + +D+ VE++ + H N+V+LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLHEAIEPKV 298
E IL+ E+ G ++ M + E++++++ T AL YLH+ K+
Sbjct: 105 YENNLWILI-EFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 299 VHRDIKSSNILIDENFDAKISDFGLA 324
+HRD+K+ NIL + D K++DFG++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLL-GYC 239
+GDG +G VY+ Q + +A K+++ + + +D+ VE++ + H N+V+LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLHEAIEPKV 298
E IL+ E+ G ++ M + E++++++ T AL YLH+ K+
Sbjct: 105 YENNLWILI-EFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 299 VHRDIKSSNILIDENFDAKISDFGLA 324
+HRD+K+ NIL + D K++DFG++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
Q +V ++ +L L + + I TA+ + YLH ++HR
Sbjct: 80 -PQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAK---SIIHR 132
Query: 302 DIKSSNILIDENFDAKISDFGLAKL 326
D+KS+NI + E+ KI DFGLA +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATV 157
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++ G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFGLAKLLGA
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
Q +V ++ +L L + + I TA+ + YLH ++HR
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 302 DIKSSNILIDENFDAKISDFGLA 324
D+KS+NI + E+ KI DFGLA
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 173
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R EVE H+RH N++RL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 78
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
GY + T+ L+ EY G + + ++ + + A AL+Y H
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYR----ELQKLSRFDEQRTATYITELANALSYCHSK--- 131
Query: 297 KVVHRDIKSSNILIDENFDAKISDFG 322
+V+HRDIK N+L+ N + KI+DFG
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 29/174 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVR 234
++ +IG+G +GVV++ +L+ VA+KK+L DK F+ E++ + V+H N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVD 96
Query: 235 LLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL------G 282
L + + LV EYV E R R Y + M +LL
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRA---SRHYAKLKQTMPMLLIKLYMYQ 149
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D K+ DFG AK+L AG+ +++
Sbjct: 150 LLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS 200
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
Q +V ++ +L L + + I TA+ + YLH ++HR
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 302 DIKSSNILIDENFDAKISDFGLA 324
D+KS+NI + E+ KI DFGLA
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R EVE H+RH N++RL
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 78
Query: 237 GYCIEGTQRILVYEYVNNGN----LEQWLRGDMCDRGYLTWEARMKILLGT-AKALAYLH 291
GY + T+ L+ EY G L++ R D E R + A AL+Y H
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSRFD---------EQRTATYITELANALSYCH 129
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
+V+HRDIK N+L+ N + KI+DFG
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK-----DFRVEVEAI 224
Q A F +G G +G VY + N + K+L Q +K R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFK-AQLEKAGVEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H KV+HRDIK N+L+ + KI+DFG
Sbjct: 119 NALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 169
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G N T VAVK L PG + F E + ++H LVRL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL--KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
++ EY+ G+L +L+ D + G + + A+ +AY+ +H
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIH 133
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++N+L+ E+ KI+DFGLA+++
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVI 160
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLN-NPGQADKDFRVEVEAIGHV 227
F K ++G G +G VY+G + VA+K+L +A+K+ E + V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEARMKILLGTA 284
+ ++ RLLG C+ T + L+ + + G L ++R ++ + L W ++ A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
K + YL + ++VHRD+ + N+L+ KI+DFG AKLLGA
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 176
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 182 IGDGGYGVVYRGQL-MNGTAVAVKKLLNN-PGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
IG G +G V+ G+L + T VAVK P F E + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-V 298
+ +V E V G+ +LR + R+K LL A E +E K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA-------RLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAK 325
+HRD+ + N L+ E KISDFG+++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 16 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ Y + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 78 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 125
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA 324
++HRD+KS+NI + E+ KI DFGLA
Sbjct: 126 -SIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYK----ELQKLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 181 IIGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
++G G +G + G + +K+L+ + + F EV+ + + H N+++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ + + EY+ G L ++ D Y W R+ A +AYLH ++
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKS--MDSQY-PWSQRVSFAKDIASGMAYLHSM---NII 130
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
HRD+ S N L+ EN + ++DFGLA+L+ K+
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 182 IGDGGYGVVYRGQL-MNGTAVAVKKLLNN-PGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
IG G +G V+ G+L + T VAVK P F E + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK-V 298
+ +V E V G+ +LR + R+K LL A E +E K
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA-------RLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAK 325
+HRD+ + N L+ E KISDFG+++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 81 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
++HRD+KS+NI + E+ KI DFGLA +
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 81 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA 324
++HRD+KS+NI + E+ KI DFGLA
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 76 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA 324
++HRD+KS+NI + E+ KI DFGLA
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 76 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA 324
++HRD+KS+NI + E+ KI DFGLA
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ----KLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 16/155 (10%)
Query: 179 DNIIGDGGYGVVYRG----QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNL 232
D +IG G +GVVY G Q N A+K L + Q + R + G + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG-LNHPNV 84
Query: 233 VRLLGYCI--EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
+ L+G + EG +L+ Y+ +G+L Q++R + T + + L A+ + YL
Sbjct: 85 LALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNP---TVKDLISFGLQVARGMEYL 140
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E K VHRD+ + N ++DE+F K++DFGLA+
Sbjct: 141 AEQ---KFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 96 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 143
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA 324
++HRD+KS+NI + E+ KI DFGLA
Sbjct: 144 -SIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 103 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 150
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA 324
++HRD+KS+NI + E+ KI DFGLA
Sbjct: 151 -SIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ G N T VAVK L PG + F E + ++H LVRL
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL--KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ ++ E++ G+L +L+ D + G + + A+ +AY+ +H
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++N+L+ E+ KI+DFGLA+++
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVI 159
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 104 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA 324
++HRD+KS+NI + E+ KI DFGLA
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 104 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA 324
++HRD+KS+NI + E+ KI DFGLA
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G YG V+ G+ G VAVK +A E+ +RH+N++ + I+
Sbjct: 45 IGKGRYGEVWMGK-WRGEKVAVKVFFTTE-EASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 242 GT----QRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI--- 294
GT Q L+ +Y NG+L +L+ D ++ +K+ + L +LH I
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTTLDA-----KSMLKLAYSSVSGLCHLHTEIFST 157
Query: 295 --EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+P + HRD+KS NIL+ +N I+D GLA
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 73
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 128
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
R+++++NIL+ + KI+DFGLA+L+
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLI 155
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
L+G+ E+ W RD + + +G+G +G V + +
Sbjct: 16 LAGVSEYELPEDPKWEFPRD------KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVT 69
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ Y + GNL
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++LR + +T++ + A+ + YL K +HRD+ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ EN KI+DFGLA+
Sbjct: 187 NVLVTENNVMKIADFGLAR 205
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G G V+ G T VAVK L D F E + ++H+ LVRL Y +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 242 GTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I ++ EY+ NG+L +L+ + LT + + A+ +A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+L+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 16/186 (8%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--NGTA--VAVKKL-LNNPGQAD-KDFRV 219
L D+ N I+G+G +G V G L +GT+ VAVK + L+N Q + ++F
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQR-----ILVYEYVNNGNLEQWLRGDMCDRG--YLT 272
E + H N++RLLG CIE + + +++ ++ G+L +L + G ++
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
+ +K ++ A + YL +HRD+ + N ++ ++ ++DFGL+K + +G
Sbjct: 146 LQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 333 HITTRV 338
+ R+
Sbjct: 203 YRQGRI 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
IG G +G VY+G+ AV + + Q + F+ EV + RH N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL------LGTAKALAYLHEAIE 295
I+ QW G E + +++ TA+ + YLH
Sbjct: 76 PQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLA 324
++HRD+KS+NI + E+ KI DFGLA
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 13/170 (7%)
Query: 158 LGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF 217
LG+G W ++ F K+ +G G +GVV G+ VA+K ++ ++ +F
Sbjct: 5 LGYGSW----EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEF 57
Query: 218 RVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++ H+ LV+L G C + ++ EY+ NG L +LR +M R + +
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EM--RHRFQTQQLL 114
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
++ +A+ YL + +HRD+ + N L+++ K+SDFGL++ +
Sbjct: 115 EMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 161
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 180 NIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKD----FRVEVEAIGHVRHKNLVR 234
+ +G G +G V G+ + G VAVK +LN D R E++ + RH ++++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L + +V EYV+ G L ++ C G L + ++ + Y H +
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
VVHRD+K N+L+D + +AKI+DFGL+ ++ G+
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 88
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 144
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 145 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 66
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 122
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 123 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 61
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 117
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 118 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 63
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 119
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VAVK ++ ++ +F E + + + H LV+ G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK-MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
+V EY++NG L +LR +G L +++ + +A+L + +HR
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSH--GKG-LEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + N L+D + K+SDFG+ + +
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYV 154
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 88
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 144
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 145 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 63
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 119
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 63
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 119
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 93/169 (55%), Gaps = 15/169 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKL-LNNPGQA----DKDFRVEV 221
D++S R+ K + +G+G + VY+ + N VA+KK+ L + +A ++ E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK-IL 280
+ + + H N++ LL + LV++++ +LE ++ D + + +K +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIK----DNSLVLTPSHIKAYM 118
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
L T + L YLH+ ++HRD+K +N+L+DEN K++DFGLAK G+
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 64
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 120
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 121 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 67
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 123
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 79
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + L+ + + A
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELA 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 136 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 170
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNG-----TAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
K ++G G +G VY+G + VA+K L N +A+K+ E + V
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
+ RLLG C+ T + LV + + G L +R + RG L + + + AK +
Sbjct: 77 GSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVREN---RGRLGSQDLLNWCMQIAKGM 132
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+YL + ++VHRD+ + N+L+ KI+DFGLA+LL
Sbjct: 133 SYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 169
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 24/184 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNG---TAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-R 228
N ++IG+G +G V + ++ A+K++ + D +DF E+E + +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDM---CDRGY---------LTWEAR 276
H N++ LLG C L EY +GNL +LR D + L+ +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
+ A+ + YL + + +HRD+ + NIL+ EN+ AKI+DFGL++ G+
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK 187
Query: 337 RVMG 340
+ MG
Sbjct: 188 KTMG 191
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 24/156 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 50 IGKGRFGEVWRGK-WRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 103
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
I +P + HRD+KS NIL+ +N I+D GLA
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 24/156 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 37 IGKGRFGEVWRGK-WRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 90
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
I +P + HRD+KS NIL+ +N I+D GLA
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 28/186 (15%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNG---TAVAVKKLLNNPGQAD-KDFRVEVEAI---GH 226
N ++IG+G +G V + ++ A+K++ + D +DF E+E + GH
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDM---CDRGY---------LTWE 274
H N++ LLG C L EY +GNL +LR D + L+ +
Sbjct: 85 --HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
+ A+ + YL + + +HRD+ + NIL+ EN+ AKI+DFGL++ G+
Sbjct: 143 QLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVY 195
Query: 335 TTRVMG 340
+ MG
Sbjct: 196 VKKTMG 201
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 175
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 24/156 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 70
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
I +P + HRD+KS NIL+ +N I+D GLA
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 24/156 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 12 IGKGRFGEVWRGK-WRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 65
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
I +P + HRD+KS NIL+ +N I+D GLA
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 59
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 115
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI+DFG
Sbjct: 116 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 24/156 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 67
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
I +P + HRD+KS NIL+ +N I+D GLA
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 24/156 (15%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
IG G +G V+RG+ G VAVK + + + FR E+ +RH+N+ LG+
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENI---LGFIA 64
Query: 241 EG-------TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
TQ LV +Y +G+L +L +R +T E +K+ L TA LA+LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 294 I-----EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
I +P + HRD+KS NIL+ +N I+D GLA
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 180 NIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKD----FRVEVEAIGHVRHKNLVR 234
+ +G G +G V G+ + G VAVK +LN D + E++ + RH ++++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T +V EYV+ G L ++ C G + ++ A+ Y H +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
VVHRD+K N+L+D + +AKI+DFGL+ ++ G+
Sbjct: 132 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRH 229
++ K IG+G YGVV++ + + G VA+KK L ++P R E+ + ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKH 61
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-------LTWEARMKILLG 282
NLV LL + LV+EY ++ L + D RG +TW+
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSITWQ-------- 110
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
T +A+ + H+ +HRD+K NILI ++ K+ DFG A+LL + V
Sbjct: 111 TLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 180 NIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKD----FRVEVEAIGHVRHKNLVR 234
+ +G G +G V G+ + G VAVK +LN D + E++ + RH ++++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T +V EYV+ G L ++ C G + ++ A+ Y H +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
VVHRD+K N+L+D + +AKI+DFGL+ ++ G+
Sbjct: 132 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 12/159 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRH 229
++ K IG+G YG V++ + VA+K++ ++ G R E+ + ++H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKH 60
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
KN+VRL + LV+E+ + +L+++ D C+ G L E L K L +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCN-GDLDPEIVKSFLFQLLKGLGF 116
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
H V+HRD+K N+LI+ N + K++DFGLA+ G
Sbjct: 117 CHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFG 152
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ E++ G+L ++L + + +K+L T++ +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYL------QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HRD+ + NIL++ KI DFGL K+L K + G
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 182 IGDGGYGVVYRG-----QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G V Q G VAVKKL ++ + +DF E+E + ++H N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
G C +R L+ EY+ G+L +L + + +K+L T++ +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+ +HR++ + NIL++ KI DFGL K+L K + + G
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+V+ +L++++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI---LLGTAKALA 288
+V+LL + LV+E+ L Q L+ D D LT I L + LA
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLK-DFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ H +V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV 155
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 7/146 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VA+K ++ ++ +F E + + ++ H+ LV+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++ EY+ NG L +LR +M R + +++ +A+ YL + +HR
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-EM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 128
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + N L+++ K+SDFGL++ +
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYV 154
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 138 PSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM- 196
P++ L L+G+ E+ W RD R +G+G +G V + +
Sbjct: 39 PTTENLYFQGMLAGVSEYELPEDPRWELPRD------RLVLGKPLGEGAFGQVVLAEAIG 92
Query: 197 -------NGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRIL 247
T VAVK L ++ + D D E+E + + +HKN++ LLG C + +
Sbjct: 93 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152
Query: 248 VYEYVNNGNLEQWL---RGDMCDRGY---------LTWEARMKILLGTAKALAYLHEAIE 295
+ EY + GNL ++L R + Y L+ + + A+ + YL
Sbjct: 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-- 210
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAK 325
K +HRD+ + N+L+ E+ KI+DFGLA+
Sbjct: 211 -KCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 7/146 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VA+K ++ ++ +F E + + ++ H+ LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++ EY+ NG L +LR +M R + +++ +A+ YL + +HR
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 302 DIKSSNILIDENFDAKISDFGLAKLL 327
D+ + N L+++ K+SDFGL++ +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYV 155
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VA+K ++ ++ +F E + + ++ H+ LV+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++ EY+ NG L +LR +M R + +++ +A+ YL + +HR
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-EM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 124
Query: 302 DIKSSNILIDENFDAKISDFGLAK 325
D+ + N L+++ K+SDFGL++
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSR 148
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 166
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIG 225
L L+ F ++G+G YG VY+G+ + +A K+++ G +++ + E+ +
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK 75
Query: 226 -HVRHKNLVRLLGYCIEGT------QRILVYEYVNNGNLEQWLR---GDMCDRGYLTWEA 275
+ H+N+ G I+ Q LV E+ G++ ++ G+ ++ +
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
R +IL G L++LH+ KV+HRDIK N+L+ EN + K+ DFG++ L
Sbjct: 136 R-EILRG----LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R+++ IG+G YG+V + T VA+KK+ + + R E++ + RH+N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHEN 102
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ L +E + + + + + +L + L+ ++ + L + L
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGL 157
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+LI+ D KI DFGLA++ H
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 25/196 (12%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
++G+ E+ W RD R +G+G +G V + + T
Sbjct: 9 MAGVSEYELPEDPRWELPRD------RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK 62
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 259 QWLRG------DMCDRGYLTWEARM--KILLGTAKALAYLHEAI-EPKVVHRDIKSSNIL 309
++L+ + C E ++ K L+ A +A E + K +HRD+ + N+L
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 310 IDENFDAKISDFGLAK 325
+ E+ KI+DFGLA+
Sbjct: 183 VTEDNVMKIADFGLAR 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 67
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 169
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 65
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 121
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI++FG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
Query: 182 IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARM--KILLGT 283
++ LLG C + ++ EY + GNL ++L+ + C E ++ K L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 284 AKALAYLHEAI-EPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A +A E + K +HRD+ + N+L+ E+ KI+DFGLA+
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 67
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIE 241
+G G +GVV G+ VA+K ++ ++ +F E + + ++ H+ LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 242 GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
++ EY+ NG L +LR +M R + +++ +A+ YL + +HR
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 302 DIKSSNILIDENFDAKISDFGLAK 325
D+ + N L+++ K+SDFGL++
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 123 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 156
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 154
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+V+ +L+ ++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQ-DLKTFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 170 QSATNRFSKDNIIGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAI 224
Q A F +G G +G VY + + + V K L G + R EVE
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQ 64
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H+RH N++RL GY + T+ L+ EY G + + ++ + + A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDEQRTATYITELA 120
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
AL+Y H +V+HRDIK N+L+ + KI++FG
Sbjct: 121 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG 155
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLVRLLGYCI 240
+G G YG V+RG L +G +VAVK + Q+ FR E+ +RH N++ + +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSW--FRETEIYNTVLLRHDNILGFIASDM 72
Query: 241 ----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI-- 294
TQ L+ Y +G+L D R L +++ + A LA+LH I
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLY-----DFLQRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 295 ---EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
+P + HRD KS N+L+ N I+D GLA + G ++
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYL 170
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 175 RFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNL 232
R ++ +GG+ VY Q + +G A+K+LL+N + ++ EV + + H N+
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 233 VRLLGYCI-------EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
V+ G L+ + G L ++L+ M RG L+ + +KI T +
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCR 147
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
A+ ++H +P ++HRD+K N+L+ K+ DFG A
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R E+E H+RH N++R+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLRREIEIQSHLRHPNILRMY 81
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
Y + + L+ E+ G L + L+ G + + A AL Y HE
Sbjct: 82 NYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHER--- 134
Query: 297 KVVHRDIKSSNILIDENFDAKISDFG 322
KV+HRDIK N+L+ + KI+DFG
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R E+E H+RH N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLRREIEIQSHLRHPNILRMY 80
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
Y + + L+ E+ G L + L+ G + + A AL Y HE
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHER--- 133
Query: 297 KVVHRDIKSSNILIDENFDAKISDFG 322
KV+HRDIK N+L+ + KI+DFG
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 83/148 (56%), Gaps = 12/148 (8%)
Query: 181 IIGD-GGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLL-G 237
IIG+ G +G VY+ Q + +A K+++ + + +D+ VE++ + H N+V+LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 238 YCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKALAYLHEAIEP 296
+ E IL+ E+ G ++ M + E++++++ T AL YLH+
Sbjct: 76 FYYENNLWILI-EFCAGGAVD----AVMLELERPLTESQIQVVCKQTLDALNYLHDN--- 127
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLA 324
K++HRD+K+ NIL + D K++DFG++
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 182 IGDGGYGVVY-----RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+G G +G VY + + + V K L G + R E+E H+RH N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEG-VEHQLRREIEIQSHLRHPNILRMY 80
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
Y + + L+ E+ G L + L+ G + + A AL Y HE
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALHYCHER--- 133
Query: 297 KVVHRDIKSSNILIDENFDAKISDFG 322
KV+HRDIK N+L+ + KI+DFG
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G+G +G V+ G T VA+K L PG + + F E + + ++H LV+L Y +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL--KPGTMSPESFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 241 EGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ I +V EY+N G+L +L+ D R L + + A +AY+ +
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLK-DGEGRA-LKLPNLVDMAAQVAAGMAYIERM---NYI 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLL 327
HRD++S+NIL+ KI+DFGLA+L+
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLI 155
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 182 IGDGGYGVV----YRGQLMN-GTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y + N G VAVK L + G D + E+E + ++ H+N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 236 LGYCIE--GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C E G L+ E++ +G+L+++L + + + + ++K + K + YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+ VHRD+ + N+L++ KI DFGL K + K T +
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 186
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 35/189 (18%)
Query: 169 LQSATNRFSKDNII-----GDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQAD-KD 216
L+ F + N++ G+G +G V + + T VAVK L N ++ +D
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------- 263
E + V H ++++L G C + +L+ EY G+L +LR
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 264 -------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA 316
D D LT + ++ + YL E K+VHRD+ + NIL+ E
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKM 189
Query: 317 KISDFGLAK 325
KISDFGL++
Sbjct: 190 KISDFGLSR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 35/189 (18%)
Query: 169 LQSATNRFSKDNII-----GDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQAD-KD 216
L+ F + N++ G+G +G V + + T VAVK L N ++ +D
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------- 263
E + V H ++++L G C + +L+ EY G+L +LR
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 264 -------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA 316
D D LT + ++ + YL E K+VHRD+ + NIL+ E
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKM 189
Query: 317 KISDFGLAK 325
KISDFGL++
Sbjct: 190 KISDFGLSR 198
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI---LLGTAKALA 288
+V+LL + LV+E+++ D D LT I L + LA
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMD------LKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
+ H +V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 158
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 182 IGDGGYGVV----YRGQLMN-GTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y + N G VAVK L + G D + E+E + ++ H+N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 236 LGYCIE--GTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C E G L+ E++ +G+L+++L + + + + ++K + K + YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+ VHRD+ + N+L++ KI DFGL K + K T +
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 174
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L+ ++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKTFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 66
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 124 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 157
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 13/154 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK--KLLNNPGQADKDFRVEVEAIGHVRHKNL 232
+ K + +G+G Y VY+G+ + VA+K +L + G R EV + ++H N+
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANI 62
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTAKALAYLH 291
V L LV+EY++ +L+Q+L D C G + +K+ L + LAY H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYL--DDC--GNIINMHNVKLFLFQLLRGLAYCH 117
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
KV+HRD+K N+LI+E + K++DFGLA+
Sbjct: 118 RQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 65
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI---LLGTAKALA 288
+V+LL + LV+E+++ D D LT I L + LA
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMD------LKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+ H +V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 28/186 (15%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNG---TAVAVKKLLNNPGQAD-KDFRVEVEAI---GH 226
N ++IG+G +G V + ++ A+K++ + D +DF E+E + GH
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDM---CDRGY---------LTWE 274
H N++ LLG C L EY +GNL +LR D + L+ +
Sbjct: 82 --HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI 334
+ A+ + YL + + +HR++ + NIL+ EN+ AKI+DFGL++ G+
Sbjct: 140 QLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR----GQEVY 192
Query: 335 TTRVMG 340
+ MG
Sbjct: 193 VKKTMG 198
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 64
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSM-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
+V+HRD+K N+LI+ K++DFGLA+ G
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+KK+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + L++ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
++G+ E+ W RD R +G+G +G V + + T
Sbjct: 9 MAGVSEYELPEDPRWELPRD------RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK 62
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 259 QWL---RGDMCDRGY---------LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++L R + Y L+ + + A+ + YL K +HRD+ +
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 179
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ E+ KI+DFGLA+
Sbjct: 180 NVLVTEDNVMKIADFGLAR 198
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 12/159 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRH 229
++ K IG+G YG V++ + VA+K++ ++ G R E+ + ++H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKH 60
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
KN+VRL + LV+E+ + +L+++ D C+ G L E L K L +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCN-GDLDPEIVKSFLFQLLKGLGF 116
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
H V+HRD+K N+LI+ N + K+++FGLA+ G
Sbjct: 117 CHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 174 NRFSKDNIIGDGGYGVVYRG---QLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRH 229
N D +G G +G V +G VA+K L +AD ++ E + + + +
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 69
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
+VRL+G C + +LV E G L ++L G R + ++L + + Y
Sbjct: 70 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKY 125
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
L E VHRD+ + N+L+ AKISDFGL+K LGA S+ T R G +
Sbjct: 126 LEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 19/154 (12%)
Query: 182 IGDGGYGVVYRGQL-MNGTAVAVKKLLNN---PGQADKDFRVEVEAIGHVRHKNLVRLLG 237
IG+G YGVV + + G VA+KK+ N A + R E++ + H +H N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNII---- 117
Query: 238 YCIEGTQRILVYE------YVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
I+ R V YV +E L + LT E L + L Y+H
Sbjct: 118 -AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A +V+HRD+K SN+L++EN + KI DFG+A+
Sbjct: 177 SA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K + IG G +G VY+G + N T VA+K + L +D + E+ + +
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
R G ++ T+ ++ EY+ G+ L+ + Y+ IL K L YLH
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHS 134
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+ +HRDIK++N+L+ E D K++DFG+A
Sbjct: 135 E---RKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 19/154 (12%)
Query: 182 IGDGGYGVVYRGQL-MNGTAVAVKKLLNN---PGQADKDFRVEVEAIGHVRHKNLVRLLG 237
IG+G YGVV + + G VA+KK+ N A + R E++ + H +H N++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNII---- 116
Query: 238 YCIEGTQRILVYE------YVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
I+ R V YV +E L + LT E L + L Y+H
Sbjct: 117 -AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A +V+HRD+K SN+L++EN + KI DFG+A+
Sbjct: 176 SA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 25/166 (15%)
Query: 182 IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGY---------LTWEARMKI 279
++ LLG C + ++ EY + GNL ++L R + Y L+ + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A+ + YL K +HRD+ + N+L+ E+ KI+DFGLA+
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 169 LQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAIG 225
Q ++ K +G+G YGVVY+ + G VA+K++ + G R E+ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLK 74
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTA 284
+ H N+V L+ LV+E+ +E+ L+ + + ++++KI L
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLL 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+ +A+ H+ +++HRD+K N+LI+ + K++DFGLA+ G T V+
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 25/166 (15%)
Query: 182 IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGY---------LTWEARMKI 279
++ LLG C + ++ EY + GNL ++L R + Y L+ + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A+ + YL K +HRD+ + N+L+ E+ KI+DFGLA+
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 169 LQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAIG 225
Q ++ K +G+G YGVVY+ + G VA+K++ + G R E+ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLK 74
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTA 284
+ H N+V L+ LV+E+ +E+ L+ + + ++++KI L
Sbjct: 75 ELHHPNIVSLIDVIHSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLL 129
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+ +A+ H+ +++HRD+K N+LI+ + K++DFGLA+ G T V+
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
++G+ E+ W RD R +G+G +G V + + T
Sbjct: 9 MAGVSEYELPEDPRWELPRD------RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK 62
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 259 QWLRG------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++L+ L+ + + A+ + YL K +HRD+ +
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 179
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ E+ KI+DFGLA+
Sbjct: 180 NVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 25/166 (15%)
Query: 182 IGDGGYGVVYRGQLM--------NGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKN 231
+G+G +G V + + T VAVK L ++ + D D E+E + + +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWL---RGDMCDRGY---------LTWEARMKI 279
++ LLG C + ++ EY + GNL ++L R + Y L+ + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A+ + YL K +HRD+ + N+L+ E+ KI+DFGLA+
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 136 FRPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNII------GDGGYGV 189
+ P +T+P +P + + + +L+ +DN++ G G +G
Sbjct: 292 YTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGS 351
Query: 190 VYRG---QLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYCIEGTQR 245
V +G VA+K L +AD ++ E + + + + +VRL+G C +
Sbjct: 352 VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 410
Query: 246 ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKS 305
+LV E G L ++L G R + ++L + + YL E VHR++ +
Sbjct: 411 MLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAA 464
Query: 306 SNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
N+L+ AKISDFGL+K LGA S+ T R G +
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 501
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYCI 240
+GDG +G VY+ + A+A K++ + + +D+ VE+E + H +V+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ ++ E+ G ++ + DRG LT + +AL +LH +++H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLE--LDRG-LTEPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 301 RDIKSSNILIDENFDAKISDFGLA 324
RD+K+ N+L+ D +++DFG++
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYCI 240
+GDG +G VY+ + A+A K++ + + +D+ VE+E + H +V+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ ++ E+ G ++ + DRG LT + +AL +LH +++H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLE--LDRG-LTEPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 301 RDIKSSNILIDENFDAKISDFGLA 324
RD+K+ N+L+ D +++DFG++
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 149 LSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--------NGTA 200
++G+ E+ W RD R +G+G +G V + + T
Sbjct: 9 MAGVSEYELPEDPRWELPRD------RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK 62
Query: 201 VAVKKLLNNPGQAD-KDFRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLE 258
VAVK L ++ + D D E+E + + +HKN++ LLG C + ++ EY + GNL
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 259 QWLRGDM---CDRGY---------LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
++L+ + Y L+ + + A+ + YL K +HRD+ +
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 179
Query: 307 NILIDENFDAKISDFGLAK 325
N+L+ E+ KI+DFGLA+
Sbjct: 180 NVLVTEDNVMKIADFGLAR 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+ K+ G R E+ + + H N
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPN 63
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVRHKN 231
F K IG+G YGVVY+ + + G VA+ K+ G R E+ + + H N
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPN 62
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+V+LL + LV+E+++ +L++++ D + L + LA+ H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
+V+HRD+K N+LI+ K++DFGLA+ G T V+
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 169 LQSATNRFSKDNI-----IGDGGYGVVYRGQLMNGT----AVAVKKL----LNNPGQADK 215
LQS T + ++ +GDG +GVV RG+ + +VAVK L L+ P D
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD- 66
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
DF EV A+ + H+NL+RL G + + +V E G+L LR +G+
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGT 122
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
+ + A+ + YL + +HRD+ + N+L+ KI DFGL + L H
Sbjct: 123 LSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 181 IIGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
++G G + V+ Q + G A+K + +P D E+ + ++H+N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
T LV + V+ G L + +RG T + ++ A+ YLHE +V
Sbjct: 76 ESTTHYYLVMQLVSGGE----LFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIV 128
Query: 300 HRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
HRD+K N+L +EN I+DFGL+K+ G I + GT G
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPG 172
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG VY+ G VA+K++ P ++D ++ E+ + ++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV---PVESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ T +V EY G++ +R LT + IL T K L YLH + +
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIR---LRNKTLTEDEIATILQSTLKGLEYLHFM---RKI 147
Query: 300 HRDIKSSNILIDENFDAKISDFGLA 324
HRDIK+ NIL++ AK++DFG+A
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLN--NPGQADKDFRV-EVEAIGHVRHKNLVRLLGY 238
IG G YG + + + + V K L+ + +A+K V EV + ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 239 CIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE- 295
I+ T L V EY G+L + +R YL E ++++ AL H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 296 -PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
V+HRD+K +N+ +D + K+ DFGLA++L S T V
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV 177
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 169 LQSATNRFSKDNI-----IGDGGYGVVYRGQLMNGT----AVAVKKL----LNNPGQADK 215
LQS T + ++ +GDG +GVV RG+ + +VAVK L L+ P D
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD- 66
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
DF EV A+ + H+NL+RL G + + +V E G+L LR +G+
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGT 122
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
+ + A+ + YL + +HRD+ + N+L+ KI DFGL + L H
Sbjct: 123 LSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 182 IGDGGYGVVYRGQLMN--GTAVAVKKLLNNPGQADKDFRV--EVEAIGHVR---HKNLVR 234
IG+G YG V++ + + G VA+K++ G+ EV + H+ H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 235 LLGYCI-----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
L C T+ LV+E+V+ +L +L D + E ++ + L +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
LH +VVHRD+K NIL+ + K++DFGLA++
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 182 IGDGGYGVVYRGQLMNGT----AVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ + +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
+ +HRD+ + N+L+ KI DFGL + L H
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK----KLLNNPGQADKDFRVEVEAIGHVRHK 230
F N++G G + VYR + + G VA+K K + G + + EV+ ++H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLKHP 71
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
+++ L Y + LV E +NG + ++L+ + + + EAR + + YL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV--KPFSENEAR-HFMHQIITGMLYL 128
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
H ++HRD+ SN+L+ N + KI+DFGLA L
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 182 IGDGGYGVVYRGQLMNGT----AVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ + +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 78
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
+ +HRD+ + N+L+ KI DFGL + L H
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 182 IGDGGYGVVYRGQLMNGT----AVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ + +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
+ +HRD+ + N+L+ KI DFGL + L H
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 169 LQSATNRFSKDNII-----GDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQAD-KD 216
L+ F + N++ G+G +G V + + T VAVK L N ++ +D
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG------------- 263
E + V H ++++L G C + +L+ EY G+L +LR
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 264 -------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA 316
D D LT + ++ + YL E +VHRD+ + NIL+ E
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKM 189
Query: 317 KISDFGLAK 325
KISDFGL++
Sbjct: 190 KISDFGLSR 198
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 182 IGDGGYGVVYRGQLMN--GTAVAVKKLLNNPGQADKDFRV--EVEAIGHVR---HKNLVR 234
IG+G YG V++ + + G VA+K++ G+ EV + H+ H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 235 LLGYCI-----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
L C T+ LV+E+V+ +L +L D + E ++ + L +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
LH +VVHRD+K NIL+ + K++DFGLA++
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVV-YRGQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAI 224
+D + IG GG+ V ++ G VA+K + N +D + E+EA+
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
++RH+++ +L + +V EY G L ++ DR L+ E +
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DR--LSEEETRVVFRQIV 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGL-AKLLGAGKSHITT 336
A+AY+H HRD+K N+L DE K+ DFGL AK G H+ T
Sbjct: 119 SAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 182 IGDGGYGVVYRGQLMNGT----AVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ + +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 78
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
+ +HRD+ + N+L+ KI DFGL + L H
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 17 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 72
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----Q 127
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
AL +LH +V+HRDIKS NIL+ + K++DFG + +S +T V
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 182 IGDGGYGVVYRGQLMNGT----AVAVKKL----LNNPGQADKDFRVEVEAIGHVRHKNLV 233
+GDG +GVV RG+ + +VAVK L L+ P D DF EV A+ + H+NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL G + + +V E G+L LR +G+ + + A+ + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
+ +HRD+ + N+L+ KI DFGL + L H
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 182 IGDGGYGVVYRGQLMN--GTAVAVKKLLNNPGQADKDFRV--EVEAIGHVR---HKNLVR 234
IG+G YG V++ + + G VA+K++ G+ EV + H+ H N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 235 LLGYCI-----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
L C T+ LV+E+V+ +L +L D + E ++ + L +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
LH +VVHRD+K NIL+ + K++DFGLA++
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 181 IIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKD--FRVEVEAIGHVRHKNLVRLLG 237
+IG G YG VY+G L AV V N ++ +RV + + H N+ R
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPL-----MEHDNIARF-- 72
Query: 238 YCIEGTQRI---------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
I G +R+ LV EY NG+L ++L D W + ++ + LA
Sbjct: 73 --IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLA 125
Query: 289 YLHEAI------EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
YLH + +P + HRD+ S N+L+ + ISDFGL+ L +
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 182 IGDGGYGVVYRGQL------MNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G VY GQ+ + VAVK L + D+ DF +E I H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA----YL 290
+G ++ R ++ E + G+L+ +LR + R M LL A+ +A YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 291 HEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAK 325
E +HRDI + N L+ AKI DFG+A+
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 87
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 142
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 143 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YL+ K VHRD+ + N ++ +F KI DFG+ +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV--RHKNLVRLLGYC 239
+G G YG V+RG G VAVK + +K + E E V RH+N++ +
Sbjct: 45 VGKGRYGEVWRGS-WQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 240 I----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI- 294
+ TQ L+ Y G+L +L+ D + ++I+L A LA+LH I
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT-----VSCLRIVLSIASGLAHLHIEIF 155
Query: 295 ----EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+P + HRD+KS NIL+ +N I+D GLA
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 80
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 135
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 136 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 87
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 142
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 143 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 88
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 143
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 144 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 79
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 134
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 135 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 80
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 135
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 136 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YL+ K VHRD+ + N ++ +F KI DFG+ +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YL+ K VHRD+ + N ++ +F KI DFG+ +
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLN--NPGQADKDFRV-EVEAIGHVRHKNLVRLLGY 238
IG G YG + + + + V K L+ + +A+K V EV + ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 239 CIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE- 295
I+ T L V EY G+L + +R YL E ++++ AL H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 296 -PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
V+HRD+K +N+ +D + K+ DFGLA++L S
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 102
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + ++ +L + L+ ++ + L + L
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY-----FLYQILRGL 157
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV--RHKNLVRLLGYC 239
+G G YG V+RG G VAVK + +K + E E V RH+N++ +
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 240 I----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI- 294
+ TQ L+ Y G+L +L+ D + ++I+L A LA+LH I
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT-----VSCLRIVLSIASGLAHLHIEIF 126
Query: 295 ----EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+P + HRD+KS NIL+ +N I+D GLA
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV--RHKNLVRLLGYC 239
+G G YG V+RG G VAVK + +K + E E V RH+N++ +
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 240 I----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI- 294
+ TQ L+ Y G+L +L+ D + ++I+L A LA+LH I
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT-----VSCLRIVLSIASGLAHLHIEIF 126
Query: 295 ----EPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+P + HRD+KS NIL+ +N I+D GLA
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 197 NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI-EGTQRI-LVYEYVNN 254
G VAVK+L ++ +DF+ E++ + + +V+ G G Q + LV EY+ +
Sbjct: 38 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 255 GNLEQWLRGDMCDRGYLTWEARMKILLGT--AKALAYLHEAIEPKVVHRDIKSSNILIDE 312
G L +L+ R +A +L + K + YL + VHRD+ + NIL++
Sbjct: 98 GCLRDFLQ-----RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVES 149
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMG 340
KI+DFGLAKLL K + R G
Sbjct: 150 EAHVKIADFGLAKLLPLDKDYYVVREPG 177
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YL+ K VHRD+ + N ++ +F KI DFG+ +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 197 NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI-EGTQRI-LVYEYVNN 254
G VAVK+L ++ +DF+ E++ + + +V+ G G Q + LV EY+ +
Sbjct: 39 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 255 GNLEQWLRGDMCDRGYLTWEARMKILLGT--AKALAYLHEAIEPKVVHRDIKSSNILIDE 312
G L +L+ R +A +L + K + YL + VHRD+ + NIL++
Sbjct: 99 GCLRDFLQ-----RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVES 150
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMG 340
KI+DFGLAKLL K + R G
Sbjct: 151 EAHVKIADFGLAKLLPLDKDYYVVREPG 178
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YL+ K VHRD+ + N ++ +F KI DFG+ +
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 164 FTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK- 215
F + + A + + +G G +G+VY G + G T VA+K + ++
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLT 272
+F E + ++VRLLG +G +++ E + G+L+ +LR +M + L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 273 WEARMKILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ K++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 84
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 139
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 197 NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI-EGTQRI-LVYEYVNN 254
G VAVK+L ++ +DF+ E++ + + +V+ G G Q + LV EY+ +
Sbjct: 51 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 255 GNLEQWLRGDMCDRGYLTWEARMKILLGT--AKALAYLHEAIEPKVVHRDIKSSNILIDE 312
G L +L+ R +A +L + K + YL + VHRD+ + NIL++
Sbjct: 111 GCLRDFLQ-----RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVES 162
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMG 340
KI+DFGLAKLL K + R G
Sbjct: 163 EAHVKIADFGLAKLLPLDKDYYVVREPG 190
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YL+ K VHRD+ + N ++ +F KI DFG+ +
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLN--NPGQADKDFRV-EVEAIGHVRHKNLVRLLGY 238
IG G YG + + + + V K L+ + +A+K V EV + ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 239 CIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE- 295
I+ T L V EY G+L + +R YL E ++++ AL H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 296 -PKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
V+HRD+K +N+ +D + K+ DFGLA++L
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKDFRVEVEA 223
D Q + IG G + V + ++ G VAVK K NP K FR EV
Sbjct: 9 DEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRI 67
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEARMKILL 281
+ + H N+V+L LV EY + G + +L G M ++ EAR K
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAK-FR 121
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG + G
Sbjct: 122 QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG 167
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLG 237
IG G + V + ++ G VA+K K NP K FR EV + + H N+V+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 238 YCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
L+ EY + G + +L G M ++ EAR K A+ Y H+
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-----EARSK-FRQIVSAVQYCHQK-- 130
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
++VHRD+K+ N+L+D + + KI+DFG + G
Sbjct: 131 -RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 164
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 102
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 157
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 182 IGDGGYGVV-----YRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEA--IGHVRHKNLVR 234
+G+G +G V Y+ Q ++LL ++D RVE E + +RH ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLK---KSDMHMRVEREISYLKLLRHPHIIK 73
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
L T ++V EY G L ++ ++ +T + + A+ Y H
Sbjct: 74 LYDVITTPTDIVMVIEYAG-GELFDYI----VEKKRMTEDEGRRFFQQIICAIEYCHRH- 127
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
K+VHRD+K N+L+D+N + KI+DFGL+ ++ G
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 90
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 145
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 146 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 137
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLG 237
IG G + V + ++ G VA+K K NP K FR EV + + H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 238 YCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
L+ EY + G + +L G M ++ EAR K A+ Y H+
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-----EARSK-FRQIVSAVQYCHQK-- 133
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
++VHRD+K+ N+L+D + + KI+DFG + G
Sbjct: 134 -RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA++K+ + + R E++ + RH+N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 141
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 34/173 (19%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + +IG GG+G V++ + ++G +K++ N +A++ EV+A+ + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 235 LLGYCIEG----------------TQRILV-YEYVNNGNLEQWL---RGDMCDRGYLTWE 274
G C +G T+ + + E+ + G LEQW+ RG+ D+
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA--- 124
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+++ K + Y+H K+++RD+K SNI + + KI DFGL L
Sbjct: 125 --LELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 22/162 (13%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V + +G +AVKKL + P Q A + +R E+ + H++H
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 109
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG-DM-----CDRGYLTWEARMKILLGT 283
+N++ LL T E N+ L L G D+ C + LT + ++
Sbjct: 110 ENVIGLLDVFTPATS----LEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI 163
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 164 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHEN 84
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 139
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR M + L + K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 24/184 (13%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLM------NGTAVAVKKLLNNP-GQADKDFR 218
L+++ + RF ++ +G+ +G VY+G L AVA+K L + G ++FR
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEAR 276
E ++H N+V LLG + +++ Y ++G+L ++L R D G +
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 277 MK----------ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
+K ++ A + YL VVH+D+ + N+L+ + + KISD GL +
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 327 LGAG 330
+ A
Sbjct: 195 VYAA 198
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 28/181 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHVRHKNLV 233
F +++G G G +VYRG + + VAVK++L AD++ ++ E+ H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADREVQLLRESD---EHPNVI 81
Query: 234 RLLGYCIEGTQRILVYEYVN----NGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
R +C E ++ ++Y+ L++++ D +L E + +L T LA+
Sbjct: 82 RY--FCTEKDRQ---FQYIAIELCAATLQEYVEQK--DFAHLGLEP-ITLLQQTTSGLAH 133
Query: 290 LHEAIEPKVVHRDIKSSNILIDE-----NFDAKISDFGLAKLLGAGKSHITTR--VMGTF 342
LH +VHRD+K NILI A ISDFGL K L G+ + R V GT
Sbjct: 134 LHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 343 G 343
G
Sbjct: 191 G 191
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 14/173 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 18 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 73
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQ 128
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
AL +LH +V+HR+IKS NIL+ + K++DFG + +S +T V
Sbjct: 129 ALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 178
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 17 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 72
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----Q 127
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
AL +LH +V+HRDIKS NIL+ + K++DFG + +S
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 18 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 73
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R +
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQ 128
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
AL +LH +V+HRDIKS NIL+ + K++DFG + +S
Sbjct: 129 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 172
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 69
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR M + L + K
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRV-EVEAIG 225
D + RF K IG G G VY + G VA++++ N Q K+ + E+ +
Sbjct: 17 DPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMR 72
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
++ N+V L + G + +V EY+ G+L + D G + R + +
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----Q 127
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
AL +LH +V+HRDIKS NIL+ + K++DFG + +S
Sbjct: 128 ALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 24/184 (13%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLM------NGTAVAVKKLLNNP-GQADKDFR 218
L+++ + RF ++ +G+ +G VY+G L AVA+K L + G ++FR
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEAR 276
E ++H N+V LLG + +++ Y ++G+L ++L R D G +
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 277 MK----------ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
+K ++ A + YL VVH+D+ + N+L+ + + KISD GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 327 LGAG 330
+ A
Sbjct: 178 VYAA 181
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKN 231
R++ + IG+G YG+V +N VA+KK+ + + R E++ + RH+N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHEN 84
Query: 232 LV----RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ + IE + + + + + +L + L+ ++ + L + L
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGL 139
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSH 333
Y+H A V+HRD+K SN+L++ D KI DFGLA++ H
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 101
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N ++ E+F KI DFG+ +
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 163
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 164 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 112
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 165
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 166 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 217
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 155
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 208
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 209 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 260
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 104
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 157
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 158 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 209
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKK-----LLNNPGQADKDFRVEVEAIGHVRH 229
F + IG G + VYR L++G VA+KK L++ +A D E++ + + H
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
N+++ IE + +V E + G+L + ++ + + K + AL +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+H +V+HRDIK +N+ I K+ D GL + + K+ ++GT
Sbjct: 152 MHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGT 199
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 110
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 163
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 164 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 114
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 167
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 168 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + IG G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFR----VEVEAIGHVRHKNLVRLL 236
+G+G +G V G VA+K ++N A D + E+ + +RH ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 80
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ I+V EY N + ++ D EAR + A+ Y H
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEAR-RFFQQIISAVEYCHRH--- 132
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
K+VHRD+K N+L+DE+ + KI+DFGL+ ++ G
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 166
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV---- 227
AT+R+ IG G YG VY+ + + K + P + + + V
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 228 -----RHKNLVRLLGYCIEG-TQR----ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
H N+VRL+ C T R LV+E+V+ +L +L D L E
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIK 123
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
++ + L +LH +VHRD+K NIL+ K++DFGLA++
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFR----VEVEAIGHVRHKNLVRLL 236
+G+G +G V G VA+K ++N A D + E+ + +RH ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ I+V EY N + ++ D EAR + A+ Y H
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EAR-RFFQQIISAVEYCHRH--- 122
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
K+VHRD+K N+L+DE+ + KI+DFGL+ ++ G
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 156
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFR----VEVEAIGHVRHKNLVRLL 236
+G+G +G V G VA+K ++N A D + E+ + +RH ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ I+V EY N + ++ D EAR + A+ Y H
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEAR-RFFQQIISAVEYCHRH--- 131
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
K+VHRD+K N+L+DE+ + KI+DFGL+ ++ G
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 22/171 (12%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 234 RLLGYCI-EGTQRILVY-EYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LLGTAK 285
RL + G ++ +VY V + E R R Y + + + + +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
+LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 95
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 148
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 149 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 200
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 84
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 137
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 138 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 189
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 81
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 134
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 135 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 141
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 142 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFR----VEVEAIGHVRHKNLVRLL 236
+G+G +G V G VA+K ++N A D + E+ + +RH ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ I+V EY N + ++ D EAR + A+ Y H
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE----QEAR-RFFQQIISAVEYCHRH--- 126
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
K+VHRD+K N+L+DE+ + KI+DFGL+ ++ G
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 160
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++G++ ++ EY+ G+ LR D + +L K L YLH
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILKGLDYLHS 138
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
K +HRDIK++N+L+ E D K++DFG+A
Sbjct: 139 E---KKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 89
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 142
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 143 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YL+ K VHR++ + N ++ +F KI DFG+ +
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 129
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 130 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 182 IGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVR 234
+G G +G+VY G ++ G A VAVK + + ++ +F E + ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 235 LLGYCIEGTQRILVYEYVNNGNLEQWLRG------DMCDRGYLTWEARMKILLGTAKALA 288
LLG +G ++V E + +G+L+ +LR + R T + +++ A +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YL+ K VHR++ + N ++ +F KI DFG+ +
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 88
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 141
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 142 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 80
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 133
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 134 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SKPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 147
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 129
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 130 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 103
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 158
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 76
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 129
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 130 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 30/175 (17%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFR-VEVEAIGHVRHKNLV 233
++ +IG+G +GVVY+ +L + G VA+KK+L DK F+ E++ + + H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIV 77
Query: 234 RLLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LL 281
RL + ++ LV +YV E R R Y + + + +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMY 130
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 131 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAVK K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG +
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAVK K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG +
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 147
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 147
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 197 NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLG--YCIEGTQRILVYEYVNN 254
G VAVK+L ++ +DF+ E++ + + +V+ G Y + LV EY+ +
Sbjct: 35 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 255 GNLEQWLRGDMCDRGYLTWEARMKILLGT--AKALAYLHEAIEPKVVHRDIKSSNILIDE 312
G L +L+ R +A +L + K + YL + VHRD+ + NIL++
Sbjct: 95 GCLRDFLQ-----RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVES 146
Query: 313 NFDAKISDFGLAKLLGAGKSHITTRVMG 340
KI+DFGLAKLL K R G
Sbjct: 147 EAHVKIADFGLAKLLPLDKDXXVVREPG 174
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 91
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 146
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNG-------TAVAVKKLLNNPGQADK-DFRVEV 221
+ A + + +G G +G+VY G + G T VA+K + ++ +F E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG---DMCDRGYLTWEARMK 278
+ ++VRLLG +G +++ E + G+L+ +LR +M + L + K
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 279 ILLGT---AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++ A +AYL+ K VHRD+ + N + E+F KI DFG+ +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 155
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
K ++G G +G V++G + V +K + + G Q+ + + AIG +
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
H ++VRLLG C G+ LV +Y+ G+L +R RG L + + + AK +
Sbjct: 91 DHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGM 146
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
YL E +VHR++ + N+L+ +++DFG+A LL
Sbjct: 147 YYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 183
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 99
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 154
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 141
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 91
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 146
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 103
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 158
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPG-QADKDFRVEVEAIGHV 227
K ++G G +G V++G + V +K + + G Q+ + + AIG +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
H ++VRLLG C G+ LV +Y+ G+L +R RG L + + + AK +
Sbjct: 73 DHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGM 128
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
YL E +VHR++ + N+L+ +++DFG+A LL
Sbjct: 129 YYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAVK K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG +
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 155
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 141
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 79
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 134
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 135 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 99
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 154
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 77
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 132
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 155
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-- 228
AT+R+ IG G YG VY+ + +G VA+K + G+ V + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVALLRRL 60
Query: 229 ----HKNLVRLLGYCIEG-TQR----ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
H N+VRL+ C T R LV+E+V+ +L +L D L E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
+ + L +LH +VHRD+K NIL+ K++DFGLA++
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 77
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 132
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-- 228
AT+R+ IG G YG VY+ + +G VA+K + G+ V + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVALLRRL 60
Query: 229 ----HKNLVRLLGYCIEG-TQR----ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
H N+VRL+ C T R LV+E+V+ +L +L D L E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
+ + L +LH +VHRD+K NIL+ K++DFGLA++
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 141
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 78
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 133
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 172 ATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-- 228
AT+R+ IG G YG VY+ + +G VA+K + G+ V + +R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST-VREVALLRRL 60
Query: 229 ----HKNLVRLLGYCIEG-TQR----ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
H N+VRL+ C T R LV+E+V+ +L +L D L E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 117
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKL 326
+ + L +LH +VHRD+K NIL+ K++DFGLA++
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 137
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 141
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
++ +IG+G +GVVY+ +L + G VA+KK+L G+A K+ E++ + + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIVR 77
Query: 235 LLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
L + ++ LV +YV + + R + L + ++LA
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYV-PATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
Y+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 51/202 (25%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + +IG GG+G V++ + ++G ++++ N +A++ EV+A+ + H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 235 LLGYCIEG-----------------------------TQRILV-YEYVNNGNLEQWL--- 261
G C +G T+ + + E+ + G LEQW+
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 262 RGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDF 321
RG+ D+ +++ K + Y+H K++HRD+K SNI + + KI DF
Sbjct: 129 RGEKLDKVLA-----LELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 322 GL-AKLLGAGKSHITTRVMGTF 342
GL L GK TR GT
Sbjct: 181 GLVTSLKNDGKR---TRSKGTL 199
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 28/174 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
++ +IG+G +GVVY+ +L + G VA+KK+L G+A K+ E++ + + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIVR 77
Query: 235 LLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LLG 282
L + ++ LV +YV E R R Y + + + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMYQ 130
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 131 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVR-HKNLVRLL 236
+G G YG+V++ G VAVKK+ + N A + FR E+ + + H+N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
R LV++Y+ +L +R ++ + + + ++ K + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQY-----VVYQLIKVIKYLHSG- 128
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
++HRD+K SNIL++ K++DFGL++
Sbjct: 129 --GLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYA 117
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ +
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 91 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYA 145
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ +
Sbjct: 146 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 189
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 165 TLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRV 219
+ RD + R IG+G +G V++G M+ AVA+K N + ++ F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMK 278
E + H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLIL 120
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ +
Sbjct: 121 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 165 TLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRV 219
+ RD + R IG+G +G V++G M+ AVA+K N + ++ F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMK 278
E + H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLIL 118
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ +
Sbjct: 119 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 164
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 28/174 (16%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
++ +IG+G +GVVY+ +L + G VA+KK+L G+A K+ E++ + + H N+VR
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKN--RELQIMRKLDHCNIVR 77
Query: 235 LLGYCIEGTQRI------LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI------LLG 282
L + ++ LV +YV E R R Y + + + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP----ETVYR---VARHYSRAKQTLPVIYVKLYMYQ 130
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAKLLGAGKSHIT 335
++LAY+H + HRDIK N+L+D + K+ DFG AK L G+ +++
Sbjct: 131 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYA 117
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ +
Sbjct: 118 YQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQAD---KDFRVEVEAIGHVRHKN 231
FS IG G +G VY + + N VA+KK+ + Q++ +D EV + +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++ G + LV EY G+ L + L + G + LAYLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCL-GSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
++HRD+K+ NIL+ E K+ DFG A ++ + T
Sbjct: 172 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT 213
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 28/188 (14%)
Query: 170 QSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHV 227
QS N + I+G G G VV++G G VAVK++L + A + ++ E+ H
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH- 68
Query: 228 RHKNLVRLLGYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEAR---MKILLGT 283
N++R YC E T R L + + N NL+ + L + + +L
Sbjct: 69 --PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILID-------------ENFDAKISDFGLAKLLGAG 330
A +A+LH K++HRD+K NIL+ EN ISDFGL K L +G
Sbjct: 125 ASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 331 KSHITTRV 338
+S T +
Sbjct: 182 QSSFRTNL 189
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 165 TLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRV 219
+ RD + R IG+G +G V++G M+ AVA+K N + ++ F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMK 278
E + H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLIL 117
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ +
Sbjct: 118 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 163
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CAK--LTDDHVQFLIYQIL 131
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL 281
+ H ++V+L+G E I++ E G L +L+ + L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---VRKFSLDLASLILYAY 118
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ +
Sbjct: 119 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAV+ K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG +
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAV+ K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + + H N+V+L LV EY + G + +L G M ++ E
Sbjct: 61 FR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG +
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R + +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD--------RGYLTWEAR 276
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT E
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 147 IXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG----DMCDRGYLTWEARMKILLGTAK 285
+N++ LL E N+ L L G ++ LT + ++ +
Sbjct: 81 ENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR 136
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQAD---KDFRVEVEAIGHVRHKN 231
FS IG G +G VY + + N VA+KK+ + Q++ +D EV + +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++ G + LV EY G+ L + L + G + LAYLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
++HRD+K+ NIL+ E K+ DFG A ++ + T
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT 174
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 125
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 90
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 145
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG----DMCDRGYLTWEARMKILLGTAK 285
+N++ LL E N+ L L G ++ LT + ++ +
Sbjct: 81 ENVIGLLDVFTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR 136
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
L Y+H A ++HRD+K SN+ ++E+ + KI DFGLA+
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++ T+ ++ EY+ G+ D+ + G L IL K L YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLHS 142
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
K +HRDIK++N+L+ E+ + K++DFG+A
Sbjct: 143 E---KKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 127
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++ T+ ++ EY+ G+ D+ + G L IL K L YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLHS 137
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
K +HRDIK++N+L+ E+ + K++DFG+A
Sbjct: 138 E---KKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKDFRVEV 221
+ DL R K IG G + V + ++ G VAVK K N K FR EV
Sbjct: 1 MADLHIGNYRLLK--TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EV 57
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWEARMKI 279
+ + H N+V+L LV EY + G + +L G M ++ EAR K
Sbjct: 58 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK-----EARAK- 111
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG +
Sbjct: 112 FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI D+GLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++ T+ ++ EY+ G+ D+ + G L IL K L YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
K +HRDIK++N+L+ E+ + K++DFG+A
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R + +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD--------RGYLTWEAR 276
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT E
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 147 ICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G YG V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGT--AVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNL 232
F+K IG G +G V++G + N T VA+K + L +D + E+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
+ G ++ T+ ++ EY+ G+ D+ + G L IL K L YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
K +HRDIK++N+L+ E+ + K++DFG+A
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD----------RGYLTWE 274
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT E
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 149 HLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 165 TLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRV 219
+ RD + R IG+G +G V++G M+ AVA+K N + ++ F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
E + H ++V+L+G E I++ E G L +L+ + L + +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---VRKFSLDLASLILY 496
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 431
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 432 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 486
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G +
Sbjct: 487 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 182 IGDGGYGVV-YRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
IG+G G+V + G VAVKK+ Q + EV + H N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
G + +V E++ G L D+ + E + L +AL+YLH V+H
Sbjct: 113 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIH 164
Query: 301 RDIKSSNILIDENFDAKISDFGLA 324
RDIKS +IL+ + K+SDFG
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFC 188
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 17 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 73
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 128
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
L+ LH V+HRDIKS +IL+ + K+SDFG
Sbjct: 129 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 163
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 28 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 84
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 85 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 139
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
L+ LH V+HRDIKS +IL+ + K+SDFG
Sbjct: 140 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 174
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 21 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 77
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 132
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
L+ LH V+HRDIKS +IL+ + K+SDFG
Sbjct: 133 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 167
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R + +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD-----------RGYLTW 273
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 274 EARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 148 EHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 432
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 433 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 487
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G +
Sbjct: 488 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 180 NIIGDGGYGVVYR------GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
+IG G + VV R GQ V V K ++PG + +D + E ++H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 234 RLLGYCIEGTQRILVYEYVNNGNL--EQWLRGDMCDRGYLTWEA----RMKILLGTAKAL 287
LL +V+E+++ +L E R D G++ EA M+ +L +AL
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQIL---EAL 143
Query: 288 AYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLG 328
Y H+ ++HRD+K N+L+ + + K+ DFG+A LG
Sbjct: 144 RYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG 184
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 26 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 82
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 83 YQHENVVEMYNSYLVGDELWVVMEFLEGGAL-----TDIVTHTRMNEEQIAAVCLAVLQA 137
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
L+ LH V+HRDIKS +IL+ + K+SDFG
Sbjct: 138 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 172
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 148 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 204
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 205 YQHENVVEMYNSYLVGDELWVVMEFLEGGAL-----TDIVTHTRMNEEQIAAVCLAVLQA 259
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
L+ LH V+HRDIKS +IL+ + K+SDFG
Sbjct: 260 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 294
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKDFRVEVEAIGH 226
D +S + F K IG+G G+V + + G VAVKK+ Q + EV +
Sbjct: 71 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 127
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+H+N+V + + G + +V E++ G L D+ + E + L +A
Sbjct: 128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQA 182
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
L+ LH V+HRDIKS +IL+ + K+SDFG
Sbjct: 183 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLV 233
F +G GG+GVV+ + ++ A+K++ L N A + EV+A+ + H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 234 RLLGYCIE--GTQRIL-----VYEYVN-----NGNLEQWLRGDMCDRGYLTWEARMKILL 281
R +E T+++ VY Y+ NL+ W+ G C + I L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR-CTIEERERSVCLHIFL 125
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
A+A+ +LH ++HRD+K SNI + K+ DFGL + + T
Sbjct: 126 QIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 147 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGH 226
+ R+ + IG G G+V + G VAVKKL N A + +R E+ +
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKC 79
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWE-ARMKILLGTAK 285
V HKN++ LL + Q+ L E+ + + + + ++C ++ + RM LL
Sbjct: 80 VNHKNIISLLN--VFTPQKTL-EEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQML 136
Query: 286 A-LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +LH A ++HRD+K SNI++ + KI DFGLA+
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGH 226
+ R+ + IG G G+V + G VAVKKL N A + +R E+ +
Sbjct: 19 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKC 77
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWE-ARMKILLGTAK 285
V HKN++ LL + Q+ L E+ + + + + ++C ++ + RM LL
Sbjct: 78 VNHKNIISLLN--VFTPQKTL-EEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQML 134
Query: 286 A-LAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +LH A ++HRD+K SNI++ + KI DFGLA+
Sbjct: 135 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 173 TNRFSKDNI-----IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-----FRVEVE 222
T F+ D+ +G G +G VY + + K+L Q +K+ R E+E
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFK-SQIEKEGVEHQLRREIE 75
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
H+ H N++RL Y + + L+ EY G L + L+ + I+
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT----FDEQRTATIMEE 131
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
A AL Y H KV+HRDIK N+L+ + KI+DFG
Sbjct: 132 LADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 184 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 87
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 142
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G +
Sbjct: 143 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 89
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 144
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G +
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 89
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 144
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G +
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 147 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 149 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 147 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQL--MNGTA----VAVKKLLNNPGQAD-KDFRVEVEAIGH 226
+R +G G +G V ++ TA VAVK L ++ + E++ + H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 227 V-RHKNLVRLLGYCIE-GTQRILVYEYVNNGNLEQWLRGDMCD------------RGYLT 272
+ H N+V LLG C + G +++ E+ GNL +LR + + +LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 273 WEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 70
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL-DHERMSY-----L 124
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 125 LYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 179
Query: 340 GT 341
T
Sbjct: 180 VT 181
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 180 NIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+IG G +G VY G+ A+ + + + K F+ EV A RH+N+V +G C
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ ++ L +R + L +I K + YLH ++
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK---GIL 152
Query: 300 HRDIKSSNILIDENFDAKISDFGL---AKLLGAGKSHITTRV 338
H+D+KS N+ D N I+DFGL + +L AG+ R+
Sbjct: 153 HKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRI 193
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ ++ + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-----LIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DFGL +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEVE 222
D + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILL 281
+ H ++V+L+G E I++ E G L +L+ R Y L + +
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQV----RKYSLDLASLILYAY 115
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ N K+ DFGL++ +
Sbjct: 116 QLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ T VAVK + PG + F E + ++H LV+L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I+ E++ G+L +L+ D + L + A+ +A++ + +H
Sbjct: 81 KEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NYIH 134
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+++
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVI 161
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 71 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 258 EQWLRG------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+LR D D L + A+ +A+L +HRD+ + N+L+
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 186
Query: 312 ENFDAKISDFGLAK 325
AKI DFGLA+
Sbjct: 187 NGHVAKIGDFGLAR 200
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 79
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 134
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G +
Sbjct: 135 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 73
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 128
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G +
Sbjct: 129 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 69
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 124
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G +
Sbjct: 125 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI FGLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 67
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 122
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A +++ + G +
Sbjct: 123 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L + G Q ++ E++ + + H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 236 LGYCIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + ++ L V EYV G+L +L R + + + +AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+HR++ + N+L+D + KI DFGLAK + G + R G
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRVEV 221
RD + R IG+G +G V++G M+ AVA+K N + ++ F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL 281
+ H ++V+L+G E I++ E G L +L+ + L + +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---VRKFSLDLASLILYAY 118
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ K+ DFGL++ +
Sbjct: 119 QLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM 161
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 13/182 (7%)
Query: 150 SGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNN 209
S P + L +W + + ++ F ++ +G G +VYR + K+L
Sbjct: 29 SAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKK 88
Query: 210 PGQADKDF-RVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDR 268
DK R E+ + + H N+++L T+ LV E V G L + ++
Sbjct: 89 --TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFD----RIVEK 142
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAK 325
GY + + +A+AYLHE +VHRD+K N+L + KI+DFGL+K
Sbjct: 143 GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199
Query: 326 LL 327
++
Sbjct: 200 IV 201
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ T VAVK + PG + F E + ++H LV+L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I+ E++ G+L +L+ D + L + A+ +A++ + +H
Sbjct: 254 KEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NYIH 307
Query: 301 RDIKSSNILIDENFDAKISDFGLAKLL 327
RD++++NIL+ + KI+DFGLA+++
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVI 334
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 79 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 258 EQWLRG------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+LR D D L + A+ +A+L +HRD+ + N+L+
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 194
Query: 312 ENFDAKISDFGLAK 325
AKI DFGLA+
Sbjct: 195 NGHVAKIGDFGLAR 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 180 NIIGDGGYGVVYRGQLMNG--------TAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKN 231
++G G YG V+ + ++G V K + + + R E + + H+R
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 232 LVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG-TAKALAY 289
+ L Y + ++ L+ +Y+N G L L R T E ++I +G AL +
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFT-EHEVQIYVGEIVLALEH 174
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
LH+ +++RDIK NIL+D N ++DFGL+K A ++ GT
Sbjct: 175 LHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI DF LA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L G Q ++ E+E + + H+++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 236 LGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + ++ LV EYV G+L +L L A+ + +AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ 131
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+HR + + N+L+D + KI DFGLAK + G + R G
Sbjct: 132 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 175
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 182 IGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYC 239
+G G +GVV+R + G A K ++ P ++DK+ R E++ + +RH LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMT-PHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ + +++YE+++ G L + + + ++ + ++ + K L ++HE V
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYV 171
Query: 300 HRDIKSSNILI--DENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
H D+K NI+ + + K+ DFGL L +S T F
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA 217
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L G Q ++ E+E + + H+++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 236 LGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + ++ LV EYV G+L +L L A+ + +AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ 130
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+HR + + N+L+D + KI DFGLAK + G + R G
Sbjct: 131 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 174
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L + G Q ++ E++ + + H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 236 LGYCIEGTQRIL--VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + ++ L V EYV G+L +L R + + + +AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMG 340
+HR++ + N+L+D + KI DFGLAK + G + R G
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 28/181 (15%)
Query: 170 QSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHV 227
QS N + I+G G G VV++G G VAVK++L + A + ++ E+ H
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH- 68
Query: 228 RHKNLVRLLGYCIEGTQRILVYEY-VNNGNLEQWLRGDMCDRGYLTWEAR---MKILLGT 283
N++R YC E T R L + N NL+ + L + + +L
Sbjct: 69 --PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILID-------------ENFDAKISDFGLAKLLGAG 330
A +A+LH K++HRD+K NIL+ EN ISDFGL K L +G
Sbjct: 125 ASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 331 K 331
+
Sbjct: 182 Q 182
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI D GLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 182 IGDGGYGVV--YRGQLMN---GTAVAVKKLLNNPG-QADKDFRVEVEAIGHVRHKNLVRL 235
+G+G +G V Y N G VAVK L + G Q ++ E++ + + H+++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 236 LGYCIEG--TQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C + LV EYV G+L +L L A+ + +AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ 153
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+HRD+ + N+L+D + KI DFGLAK + G R
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVR 194
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 29/184 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDR--GYLTWEARM 277
V HKN++ LL +E Q + + + + NL Q ++ ++ YL ++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ--- 134
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+L+G + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T
Sbjct: 135 -MLVG----IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTP 184
Query: 338 VMGT 341
+ T
Sbjct: 185 YVVT 188
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 29/184 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDR--GYLTWEARM 277
V HKN++ LL +E Q + + + + NL Q ++ ++ YL ++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ--- 134
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+L+G + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T
Sbjct: 135 -MLVG----IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTP 184
Query: 338 VMGT 341
+ T
Sbjct: 185 YVVT 188
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 182 IGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYC 239
+G G +GVV+R + G A K ++ P ++DK+ R E++ + +RH LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMT-PHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+ + +++YE+++ G L + + + ++ + ++ + K L ++HE V
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYV 277
Query: 300 HRDIKSSNILI--DENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
H D+K NI+ + + K+ DFGL L +S T F
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA 323
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 37/198 (18%)
Query: 143 LTAPSPL-SGL--PEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNG 198
+++P P SG E + W RDLQ +G G YG V G
Sbjct: 1 MSSPPPARSGFYRQEVTKTAWEVRAVYRDLQP----------VGSGAYGAVCSAVDGRTG 50
Query: 199 TAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVRLLGYCI------EGTQRILV 248
VA+KKL P Q A + +R E+ + H+RH+N++ LL + T LV
Sbjct: 51 AKVAIKKLYR-PFQSELFAKRAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 249 YEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTAKALAYLHEAIEPKVVHRDIKSSN 307
++ +L + ++ + E R++ L+ K L Y+H A ++HRD+K N
Sbjct: 109 MPFMGT-DLGKLMKHEKLG------EDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGN 158
Query: 308 ILIDENFDAKISDFGLAK 325
+ ++E+ + KI DFGLA+
Sbjct: 159 LAVNEDCELKILDFGLAR 176
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 29/184 (15%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDR--GYLTWEARM 277
V HKN++ LL +E Q + + + + NL Q ++ ++ YL ++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ--- 134
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+L+G + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T
Sbjct: 135 -MLVG----IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTP 184
Query: 338 VMGT 341
+ T
Sbjct: 185 YVVT 188
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 165 TLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMN----GTAVAVKKLLNNPGQADKD-FRV 219
+ RD + R IG+G +G V++G M+ AVA+K N + ++ F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
E + H ++V+L+G E I++ E G L +L+ + L + +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---VRKFSLDLASLILY 496
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
+ ALAYL + VHRDI + N+L+ K+ DFGL++ +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 28/181 (15%)
Query: 170 QSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHV 227
QS N + I+G G G VV++G G VAVK++L + A + ++ E+ H
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH- 86
Query: 228 RHKNLVRLLGYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEAR---MKILLGT 283
N++R YC E T R L + + N NL+ + L + + +L
Sbjct: 87 --PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILID-------------ENFDAKISDFGLAKLLGAG 330
A +A+LH K++HRD+K NIL+ EN ISDFGL K L +G
Sbjct: 143 ASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 331 K 331
+
Sbjct: 200 Q 200
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI D GLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 28/181 (15%)
Query: 170 QSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQ-ADKDFRVEVEAIGHV 227
QS N + I+G G G VV++G G VAVK++L + A + ++ E+ H
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDH- 86
Query: 228 RHKNLVRLLGYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEAR---MKILLGT 283
N++R YC E T R L + + N NL+ + L + + +L
Sbjct: 87 --PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILID-------------ENFDAKISDFGLAKLLGAG 330
A +A+LH K++HRD+K NIL+ EN ISDFGL K L +G
Sbjct: 143 ASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 331 K 331
+
Sbjct: 200 Q 200
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+ T VAVK + PG + F E + ++H LV+L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
+ I+ E++ G+L +L+ D + L + A+ +A++ + +H
Sbjct: 248 KEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NYIH 301
Query: 301 RDIKSSNILIDENFDAKISDFGLAKL 326
RD++++NIL+ + KI+DFGLA++
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARV 327
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 20 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 76
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 77 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 130
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 131 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 185
Query: 340 GT 341
T
Sbjct: 186 VT 187
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 70
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 124
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 125 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 179
Query: 340 GT 341
T
Sbjct: 180 VT 181
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 78
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 132
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 133 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 187
Query: 340 GT 341
T
Sbjct: 188 VT 189
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 25/178 (14%)
Query: 175 RFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAIGHVR 228
R+ IG G G+V Y L VA+KKL N A + +R E+ + V
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVN 119
Query: 229 HKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +L
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----LLYQM 173
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+ +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T + T
Sbjct: 174 LCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVT 226
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 115
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 169
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 170 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 224
Query: 340 GT 341
T
Sbjct: 225 VT 226
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 71
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 125
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 126 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 180
Query: 340 GT 341
T
Sbjct: 181 VT 182
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHK 230
+ F K + +G G GVV++ V +KL++ P ++ R E++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSP 64
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
+V G + + E+++ G+L+Q L+ G + + K+ + K L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL--GAGKSHITTR 337
E + K++HRD+K SNIL++ + K+ DFG++ L S + TR
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 40/187 (21%)
Query: 181 IIGDGGYGVVYRGQLMNGTA-----------VAVKKLLNNPGQADKD-FRVEVEAIGHV- 227
++G G +G ++MN TA VAVK L ++++ E++ + +
Sbjct: 52 VLGSGAFG-----KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 106
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRG-------------------DMCDR 268
H+N+V LLG C L++EY G+L +LR + D
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 269 GYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
LT+E + AK + +L VHRD+ + N+L+ KI DFGLA+ +
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 329 AGKSHIT 335
+ +++
Sbjct: 224 SDSNYVV 230
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHK 230
+ F K + +G G GVV++ V +KL++ P ++ R E++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSP 64
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
+V G + + E+++ G+L+Q L+ G + + K+ + K L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL--GAGKSHITTR 337
E + K++HRD+K SNIL++ + K+ DFG++ L S + TR
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 71
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 125
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 126 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 180
Query: 340 GT 341
T
Sbjct: 181 VT 182
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHK 230
+ F K + +G G GVV++ V +KL++ P ++ R E++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSP 64
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
+V G + + E+++ G+L+Q L+ G + + K+ + K L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL--GAGKSHITTR 337
E + K++HRD+K SNIL++ + K+ DFG++ L S + TR
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 71
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 72 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 125
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 126 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 180
Query: 340 GT 341
T
Sbjct: 181 VT 182
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 178 KDNIIGDGGYGVVYRG--QLMNGTAVAVKKLL----NNPGQADKDFRVEVEAIGHVRHKN 231
+D +G G +G V +G Q+ K+L N+P D + E + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 73
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR++G C E +LV E G L ++L+ + + E ++ +G + YL
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 128
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
E+ VHRD+ + N+L+ AKISDFGL+K L A ++ + G +
Sbjct: 129 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVRLL 236
+G G YG V +G VA+KKL + P Q A + +R E+ + H++H+N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLL 89
Query: 237 GYCIEGTQRILVYE-YVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTAKALAYLHEAI 294
+ Y+ Y+ ++ L+ M G E +++ L+ K L Y+H A
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSA- 145
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS-HITTR 337
VVHRD+K N+ ++E+ + KI DFGLA+ A + ++ TR
Sbjct: 146 --GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 187
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLM 78
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-DHERMSY-----L 132
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 133 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 187
Query: 340 GT 341
T
Sbjct: 188 VT 189
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 128
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+ K++HRD+K SNIL++ + K+ DFG++
Sbjct: 185 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHK 230
+ F K + +G G GVV++ V +KL++ P ++ R E++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSP 64
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
+V G + + E+++ G+L+Q L+ G + + K+ + K L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL--GAGKSHITTR 337
E + K++HRD+K SNIL++ + K+ DFG++ L S + TR
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHK 230
+ F K + +G G GVV++ V +KL++ P ++ R E++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSP 64
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
+V G + + E+++ G+L+Q L+ G + + K+ + K L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL--GAGKSHITTR 337
E + K++HRD+K SNIL++ + K+ DFG++ L S + TR
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 175 RFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRH 229
R+ + +G G YG V G VAVKKL + P Q A + +R E+ + H++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 230 KNLVRLL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
+N++ LL +E + + ++ +L ++ C + LT + ++
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK--LTDDHVQFLIYQIL 135
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ L Y+H A ++HRD+K SN+ ++E+ + KI D GLA+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 26 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 82
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 83 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 136
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 137 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 191
Query: 340 GT 341
T
Sbjct: 192 VT 193
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 25/177 (14%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMT 183
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 340 GT 341
T
Sbjct: 187 VT 188
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 161 GHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVK---KLLNNPGQADKD 216
G+ T D Q + IG G + V + ++ G VAVK K N K
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 217 FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWL--RGDMCDRGYLTWE 274
FR EV + H N+V+L LV EY + G + +L G ++ E
Sbjct: 61 FR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK-----E 114
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
AR K A+ Y H+ +VHRD+K+ N+L+D + + KI+DFG +
Sbjct: 115 ARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVRLL 236
+G G YG V +G VA+KKL + P Q A + +R E+ + H++H+N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLL 107
Query: 237 GYCIEGTQRILVYE-YVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTAKALAYLHEAI 294
+ Y+ Y+ ++ L+ M G E +++ L+ K L Y+H A
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSA- 163
Query: 295 EPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS-HITTR 337
VVHRD+K N+ ++E+ + KI DFGLA+ A + ++ TR
Sbjct: 164 --GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 205
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 78
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 79 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 132
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVM 339
L + +LH A ++HRD+K SNI++ + KI DFGLA+ AG S + T +
Sbjct: 133 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 187
Query: 340 GT 341
T
Sbjct: 188 VT 189
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 24/156 (15%)
Query: 182 IGDGGYGVV---YRGQLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVR 234
+G G YG V Y +L VAVKKL + P Q A + +R E+ + H++H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKL-SRPFQSLIHARRTYR-ELRLLKHLKHENVIG 91
Query: 235 LL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
LL IE + + + +L ++ ++ + ++ + L Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-----LVYQLLRGLKY 146
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+H A ++HRD+K SN+ ++E+ + +I DFGLA+
Sbjct: 147 IHSA---GIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 69
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+ K++HRD+K SNIL++ + K+ DFG++
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKL-LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC 239
+G+G G V + AVAVK + + ++ + E+ + H+N+V+ G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
EG + L EY + G L + D+ G +A+ + + YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQ-RFFHQLMAGVVYLHGI---GIT 126
Query: 300 HRDIKSSNILIDENFDAKISDFGLAKLLGA-GKSHITTRVMGTF 342
HRDIK N+L+DE + KISDFGLA + + + ++ GT
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 93
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL--GAGKSHITTR 337
+ K++HRD+K SNIL++ + K+ DFG++ L S + TR
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F K + +G G GVV++ V +KL++ P ++ R E++ + +
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 85
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ G + + K+ + K L YL E
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+ K++HRD+K SNIL++ + K+ DFG++
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMNGTA-VAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
+R+ +G GG G+V+ + VA+KK++ Q+ K E++ I + H N+
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 233 VRL--------------LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK 278
V++ +G E +V EY+ ++ ++G L E
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD------LANVLEQGPLLEEHARL 124
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILID-ENFDAKISDFGLAKLLGAGKSH 333
+ + L Y+H A V+HRD+K +N+ I+ E+ KI DFGLA+++ SH
Sbjct: 125 FMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 23 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 79
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 80 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 133
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
L + +LH A ++HRD+K SNI++ + KI DFGLA+ G
Sbjct: 134 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 181
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 24/156 (15%)
Query: 182 IGDGGYGVV---YRGQLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVR 234
+G G YG V Y +L VAVKKL + P Q A + +R E+ + H++H+N++
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKL-SRPFQSLIHARRTYR-ELRLLKHLKHENVIG 83
Query: 235 LL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
LL IE + + + +L ++ ++ + ++ + L Y
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKY 138
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+H A ++HRD+K SN+ ++E+ + +I DFGLA+
Sbjct: 139 IHSA---GIIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG 330
L + +LH A ++HRD+K SNI++ + KI DFGLA+ G
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 171 SATNRFSKDNIIGDGGYGVV---YRGQLMNGTAVAVKKL---LNNPGQADKDFRVEVEAI 224
+ R+ IG G G+V Y L VA+KKL N A + +R E+ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLM 77
Query: 225 GHVRHKNLVRLLGY-----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
V HKN++ LL +E Q + + + + NL Q ++ ++ D +++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMEL-DHERMSY-----L 131
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAG---KSHITT 336
L + +LH A ++HRD+K SNI++ + KI DFGLA+ G + + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVT 188
Query: 337 R 337
R
Sbjct: 189 R 189
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 79 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 258 EQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE----------PKVVHRDIKSSN 307
+LR L + I TA LH + + +HRD+ + N
Sbjct: 138 LNFLRRK---SRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 308 ILIDENFDAKISDFGLAK 325
+L+ AKI DFGLA+
Sbjct: 195 VLLTNGHVAKIGDFGLAR 212
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 170 QSATNRF---SKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-FRVEVEAIG 225
Q A N F SK I+G G +G V++ + K++ G DK+ + E+ +
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 226 HVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKILLGTA 284
+ H NL++L +LV EYV+ G L + D Y LT + +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGE----LFDRIIDESYNLTELDTILFMKQIC 197
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDA---KISDFGLAK 325
+ + ++H+ ++H D+K NIL N DA KI DFGLA+
Sbjct: 198 EGIRHMHQMY---ILHLDLKPENILC-VNRDAKQIKIIDFGLAR 237
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK-DFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +GVV+R V V K +N P DK + E+ + + H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR-MKILLGTAKALAYLHEAIEPKVV 299
+ + +L+ E+++ G L + + Y EA + + + L ++HE +V
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEH---SIV 171
Query: 300 HRDIKSSNILID--ENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
H DIK NI+ + + KI DFGLA L + T F
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 217
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 27/164 (16%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 96
Query: 230 KNLVRLLGYCIEGTQRILV-YEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGT 283
V+L +C + +++ Y NG L +++R + C R Y
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EI 146
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 147 VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 187
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 24/156 (15%)
Query: 182 IGDGGYGVV---YRGQLMNGTAVAVKKLLNNPGQ----ADKDFRVEVEAIGHVRHKNLVR 234
+G G YG V Y +L VAVKKL + P Q A + +R E+ + H++H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKL-SRPFQSLIHARRTYR-ELRLLKHLKHENVIG 91
Query: 235 LL-----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
LL IE + + + +L ++ ++ + ++ + L Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKY 146
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+H A ++HRD+K SN+ ++E+ + +I DFGLA+
Sbjct: 147 IHSA---GIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 29/144 (20%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 79 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 258 EQWLR----------------GDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHR 301
+LR + R L + +++ A+ +A+L +HR
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV------AQGMAFLASK---NCIHR 188
Query: 302 DIKSSNILIDENFDAKISDFGLAK 325
D+ + N+L+ AKI DFGLA+
Sbjct: 189 DVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
IG+G G+V + +G VAVK + Q + EV + +H N+V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVH 300
G + ++ E++ G L D+ + L E + +ALAYLH V+H
Sbjct: 113 VGEELWVLMEFLQGGAL-----TDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIH 164
Query: 301 RDIKSSNILIDENFDAKISDFGLA 324
RDIKS +IL+ + K+SDFG
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFC 188
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + ++G G +G V + + ++ A+KK+ + + EV + + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 235 LLGYCIE-------------GTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+E + + EY NG L + + ++ W +IL
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+AL+Y+H ++HRD+K NI IDE+ + KI DFGLAK
Sbjct: 127 ----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 216 DFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNL----EQWLRGDMCDRGYL 271
DF+ E++ I ++++ + G + ++YEY+ N ++ E + D ++
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 272 TWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
+ I+ + +Y+H E + HRD+K SNIL+D+N K+SDFG ++ + K
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 24/177 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
+RF + + G G +G V G + G +VA+KK++ +P +++ ++ ++ + + H N+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNI 81
Query: 233 VRLLGYCIEGTQRI-------LVYEYVNNGNLEQWLRGDMCDRGYLTWE-ARMKILLGT- 283
V+L Y +R +V EYV + L + C R Y + A IL+
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHR------CCRNYYRRQVAPPPILIKVF 134
Query: 284 ----AKALAYLHEAIEPKVVHRDIKSSNILIDE-NFDAKISDFGLAKLLGAGKSHIT 335
+++ LH V HRDIK N+L++E + K+ DFG AK L + ++
Sbjct: 135 LFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVR 228
+++ K IG G +G V++ + G VA+KK+L G R E++ + ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC--DRGYLTWEARMKILLGTAK- 285
H+N+V L+ C R Y N +L D C D L +K L K
Sbjct: 76 HENVVNLIEIC-----RTKASPY-NRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 286 -------ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
L Y+H K++HRD+K++N+LI + K++DFGLA+ K+ R
Sbjct: 130 VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 180 NIIGDGGYGVVYRGQ------LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
+++G G + V + L+ +A K L G + E+ + ++H N+V
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN----EIAVLHKIKHPNIV 79
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
L G L+ + V+ G L + ++G+ T +++ A+ YLH+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 294 IEPKVVHRDIKSSNIL---IDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
+VHRD+K N+L +DE+ ISDFGL+K+ G + + GT G
Sbjct: 136 ---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPG 183
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKN 231
+ + +IG G VV VA+K++ Q D E++A+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCD----RGYLTWEARMKILLGTAKAL 287
+V + + LV + ++ G++ ++ + G L IL + L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
YLH+ + +HRD+K+ NIL+ E+ +I+DFG++ L G +V TF
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 181 IIGDGGYGVVYRGQLMNGT--------AVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++G GGYG V++ + + G V K ++ + + E + V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V L+ G + L+ EY++ G L L + G + L + AL +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQ 139
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+++RD+K NI+++ K++DFGL K
Sbjct: 140 K---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKN 231
+ + +IG G VV VA+K++ Q D E++A+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCD----RGYLTWEARMKILLGTAKAL 287
+V + + LV + ++ G++ ++ + G L IL + L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
YLH+ + +HRD+K+ NIL+ E+ +I+DFG++ L G +V TF
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 181 IIGDGGYGVVYRGQLMNGT--------AVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++G GGYG V++ + + G V K ++ + + E + V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V L+ G + L+ EY++ G L L + G + L + AL +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQ 139
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+++RD+K NI+++ K++DFGL K
Sbjct: 140 K---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLV 233
+ I+G+G +G VY G N VAVK + +K+ F E + ++ H ++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
+L+G IE ++ E G L +L + LT + L KA+AYL E+
Sbjct: 89 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYL-ES 143
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
I VHRDI NIL+ K+ DFGL++ +
Sbjct: 144 I--NCVHRDIAVRNILVASPECVKLGDFGLSRYI 175
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 25/180 (13%)
Query: 175 RFSKDNI-IGDGGYGVVYRGQLMNGTAVAV-------KKLLNNPGQADKDFRVEVEAIGH 226
RF K +I IG G + VY+G L T V V +KL + Q F+ E E +
Sbjct: 26 RFLKFDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQR---FKEEAEXLKG 81
Query: 227 VRHKNLVRLLGY---CIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
++H N+VR ++G + I LV E +G L+ +L+ + + +IL
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL-- 139
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILID-ENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
K L +LH P ++HRD+K NI I KI D GLA L ++ V+GT
Sbjct: 140 --KGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGT 193
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 31/146 (21%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 79 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 258 EQWLR------------------GDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVV 299
+LR + R L + +++ A+ +A+L +
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQV------AQGMAFLASK---NCI 188
Query: 300 HRDIKSSNILIDENFDAKISDFGLAK 325
HRD+ + N+L+ AKI DFGLA+
Sbjct: 189 HRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLV 233
+ I+G+G +G VY G N VAVK + +K+ F E + ++ H ++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
+L+G IE ++ E G L +L + LT + L KA+AYL E+
Sbjct: 73 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYL-ES 127
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
I VHRDI NIL+ K+ DFGL++ +
Sbjct: 128 I--NCVHRDIAVRNILVASPECVKLGDFGLSRYI 159
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 179 DNIIGDGGYGVVYRGQLMNGTA----VAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLV 233
+ I+G+G +G VY G N VAVK + +K+ F E + ++ H ++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
+L+G IE ++ E G L +L + LT + L KA+AYL E+
Sbjct: 77 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYL-ES 131
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
I VHRDI NIL+ K+ DFGL++ +
Sbjct: 132 I--NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 24/178 (13%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVRH 229
+++ K IG G +G V++ + G VA+KK+L G R E++ + ++H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKH 76
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC--DRGYLTWEARMKILLGTAK-- 285
+N+V L+ C R Y N +L D C D L +K L K
Sbjct: 77 ENVVNLIEIC-----RTKASPY-NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 286 ------ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
L Y+H K++HRD+K++N+LI + K++DFGLA+ K+ R
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 182 IGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYC 239
+G GG+G V R + G VA+K+ +++ + +E++ + + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 81
Query: 240 IEGTQRI-------LVYEYVNNGNLEQWLRG--DMCDRGYLTWEARMKILLG-TAKALAY 289
+G Q++ L EY G+L ++L + C E ++ LL + AL Y
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK----EGPIRTLLSDISSALRY 137
Query: 290 LHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
LHE +++HRD+K NI++ + KI D G AK L G+ + T +GT
Sbjct: 138 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTL 188
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 31/177 (17%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V VAVK L + +++ E++ + +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGD----MCDRGYLTWEARM---- 277
+ H N+V LLG C G +++ EY G+L +LR +C + T A M
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 139
Query: 278 ---------KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
AK +A+L +HRD+ + NIL+ KI DFGLA+
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
E+ + ++H N+V L G L+ + V+ G L + ++G+ T ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRL 121
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDENFDAKISDFGLAKLLGAGKSHITT 336
+ A+ YLH+ +VHRD+K N+L +DE+ ISDFGL+K+ G + +
Sbjct: 122 IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLS 176
Query: 337 RVMGTFG 343
GT G
Sbjct: 177 TACGTPG 183
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLN---NPGQADKDFRVEVEAIGHVRHKNL 232
F + + +G G GVV + Q + +KL++ P ++ R E++ + +
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYI 76
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
V G + + E+++ G+L+Q L+ + + E K+ + + LAYL E
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLK----EAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+ +++HRD+K SNIL++ + K+ DFG++
Sbjct: 133 --KHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 182 IGDGGYGVVYRGQLMN-GTAVAVKKLLNNPGQADKD-FRVEVEAIGHVRHKNLVRLLGYC 239
+G GG+G V R + G VA+K+ +++ + +E++ + + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA-REV 80
Query: 240 IEGTQRI-------LVYEYVNNGNLEQWLRG--DMCDRGYLTWEARMKILLG-TAKALAY 289
+G Q++ L EY G+L ++L + C E ++ LL + AL Y
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK----EGPIRTLLSDISSALRY 136
Query: 290 LHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGKSHITTRVMGTF 342
LHE +++HRD+K NI++ + KI D G AK L G+ + T +GT
Sbjct: 137 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTL 187
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
E+ + ++H N+V L G L+ + V+ G L + ++G+ T ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRL 121
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDENFDAKISDFGLAKLLGAGKSHITT 336
+ A+ YLH+ +VHRD+K N+L +DE+ ISDFGL+K+ G + +
Sbjct: 122 IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLS 176
Query: 337 RVMGTFG 343
GT G
Sbjct: 177 TACGTPG 183
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V L+ A VAVK L + +++ E++ + +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGD----MCDRGYLTWEARMKIL- 280
+ H N+V LLG C G +++ EY G+L +LR +C + T A M+
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 155
Query: 281 ------------LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
AK +A+L +HRD+ + NIL+ KI DFGLA+
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQ---LMNGTA---VAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V L+ A VAVK L + +++ E++ + +
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGD----MCDRGYLTWEARM---- 277
+ H N+V LLG C G +++ EY G+L +LR +C + T A M
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 157
Query: 278 ---------KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
AK +A+L +HRD+ + NIL+ KI DFGLA+
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKI 279
E+ + ++H N+V L G L+ + V+ G L + ++G+ T ++
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRL 121
Query: 280 LLGTAKALAYLHEAIEPKVVHRDIKSSNIL---IDENFDAKISDFGLAKLLGAGKSHITT 336
+ A+ YLH+ +VHRD+K N+L +DE+ ISDFGL+K+ G + +
Sbjct: 122 IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLS 176
Query: 337 RVMGTFG 343
GT G
Sbjct: 177 TACGTPG 183
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 31/177 (17%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V VAVK L + +++ E++ + +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGD----MCDRGYLTWEARM---- 277
+ H N+V LLG C G +++ EY G+L +LR +C + T A M
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 162
Query: 278 ---------KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
AK +A+L +HRD+ + NIL+ KI DFGLA+
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 31/177 (17%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN------GTAVAVKKLLNNPGQADKD-FRVEVEAIGH 226
NR S +G G +G V VAVK L + +++ E++ + +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 227 V-RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGD----MCDRGYLTWEARM---- 277
+ H N+V LLG C G +++ EY G+L +LR +C + T A M
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK---TSPAIMEDDE 162
Query: 278 ---------KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
AK +A+L +HRD+ + NIL+ KI DFGLA+
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 31/172 (18%)
Query: 182 IGDGGYGVVY--RGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH----------VRH 229
+G G +G V+ R + NG A+K L K+ V ++ + H V H
Sbjct: 14 LGTGSFGRVHLIRSR-HNGRYYAMKVL-------KKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
++R+ G + Q ++ +Y+ G L LR + ++ L AL Y
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL----ALEY 121
Query: 290 LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
LH +++RD+K NIL+D+N KI+DFG AK + +T + GT
Sbjct: 122 LHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGT 166
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAV--AVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
++ +N IG G +G V + + GT + A KK+ + F+ E+E + + H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL + T LV E G L + + + R + +A +I+ A+AY H+
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDA-ARIMKDVLSAVAYCHKL 142
Query: 294 IEPKVVHRDIKSSNIL-IDENFDA--KISDFGLAKLLGAGK 331
V HRD+K N L + ++ D+ K+ DFGLA GK
Sbjct: 143 ---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 180
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 174 NRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRV--EVEAIGHVRHK 230
+R+ ++IG G YG V + VA+KK+L R+ E+ + + H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 231 NLVRLLGYCI----EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILL-GTAK 285
++V++L I E + V + + + ++ R + YLT E +K LL
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV----YLT-ELHIKTLLYNLLV 167
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ Y+H A ++HRD+K +N L++++ K+ DFGLA+
Sbjct: 168 GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAV--AVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
++ +N IG G +G V + + GT + A KK+ + F+ E+E + + H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
RL + T LV E G L + + + R + +A +I+ A+AY H+
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDA-ARIMKDVLSAVAYCHKL 125
Query: 294 IEPKVVHRDIKSSNIL-IDENFDA--KISDFGLAKLLGAGK 331
V HRD+K N L + ++ D+ K+ DFGLA GK
Sbjct: 126 ---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVR 228
+++ K IG G +G V++ + G VA+KK+L G R E++ + ++
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 74
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC--DRGYLTWEARMKILLGTAK- 285
H+N+V L+ C R Y N +L D C D L +K L K
Sbjct: 75 HENVVNLIEIC-----RTKASPY-NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 128
Query: 286 -------ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
L Y+H K++HRD+K++N+LI + K++DFGLA+ K+ R
Sbjct: 129 VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLL---NNPGQADKDFRVEVEAIGHVR 228
+++ K IG G +G V++ + G VA+KK+L G R E++ + ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMC--DRGYLTWEARMKILLGTAK- 285
H+N+V L+ C R Y N +L D C D L +K L K
Sbjct: 76 HENVVNLIEIC-----RTKASPY-NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 286 -------ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
L Y+H K++HRD+K++N+LI + K++DFGLA+ K+ R
Sbjct: 130 VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 25/189 (13%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD----------- 214
+ +L + + ++ I G YG V G G VA+K++ N
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 215 KDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCD-----RG 269
K E+ + H H N++ L + + + Y+ + + +R D+ R
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL----VTELMRTDLAQVIHDQRI 129
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK--LL 327
++ + + L LHEA VVHRD+ NIL+ +N D I DF LA+
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 328 GAGKSHITT 336
A K+H T
Sbjct: 187 DANKTHYVT 195
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 25/189 (13%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQAD----------- 214
+ +L + + ++ I G YG V G G VA+K++ N
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 215 KDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWE 274
K E+ + H H N++ L + + + Y+ + + +R D+ + +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL----VTELMRTDLAQ---VIHD 126
Query: 275 ARMKILLGTAKALAY-----LHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK--LL 327
R+ I + Y LH E VVHRD+ NIL+ +N D I DF LA+
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 328 GAGKSHITT 336
A K+H T
Sbjct: 187 DANKTHYVT 195
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 201 VAVKKLLNNPGQADKD--FRVEVEAIGHV-RHKNLVRLLGYCIEGTQRILVYEYVNNGNL 257
VAVK +L + AD+ E++ + H+ +H+N+V LLG C G +++ EY G+L
Sbjct: 64 VAVK-MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 258 EQWLRG-------------------DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
+LR D D L + A+ +A+L
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NC 179
Query: 299 VHRDIKSSNILIDENFDAKISDFGLAK 325
+HRD+ + N+L+ AKI DFGLA+
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 176 FSKDNIIGDGGYGV--VYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH--VRHKN 231
F KD IG G +GV + R +L VAVK + A D V+ E I H +RH N
Sbjct: 24 FVKD--IGSGNFGVARLMRDKL-TKELVAVKYIERG---AAIDENVQREIINHRSLRHPN 77
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+VR + T ++ EY + G L + + C+ G + + ++Y H
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERI----CNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 292 EAIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK 325
++ HRD+K N L+D + KI DFG +K
Sbjct: 134 SM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK 166
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVR 228
++R+ I+G GG V+ + L + VAVK L + + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 229 HKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADAC 126
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI--TTRVMGT 341
+AL + H+ ++HRD+K +NILI K+ DFG+A+ + + + T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 180 NIIGDGGYGVVYR------GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
+IG G + VV R GQ V V K ++PG + +D + E ++H ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 234 RLLGYCIEGTQRILVYEYVNNGNL--EQWLRGDMCDRGYLTWEA----RMKILLGTAKAL 287
LL +V+E+++ +L E R D G++ EA M+ +L +AL
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQIL---EAL 145
Query: 288 AYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLG 328
Y H+ ++HRD+K +L+ + + K+ FG+A LG
Sbjct: 146 RYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 186
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQA----DKDFRVEVEAIGHVRHK 230
F +G G + VV + G AVK + P +A + E+ + ++H+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCI---PKKALKGKESSIENEIAVLRKIKHE 80
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYL 290
N+V L LV + V+ G L + ++G+ T + ++ A+ YL
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYL 136
Query: 291 HEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
H +VHRD+K N+L DE ISDFGL+K+ G G + + GT G
Sbjct: 137 HRM---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPG 187
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 25/165 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 69
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 120
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 121 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 162
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 68
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 119
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 120 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 160
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 24/181 (13%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNN------PGQADKDFRVEVEA 223
++ +R+ + +G+G YG VY+ + VA+K++ PG A + EV
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSL 86
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
+ ++H+N++ L + L++EY N L+ M ++ L
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQL 141
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILI-----DENFDAKISDFGLAKLLGAGKSHITTRV 338
+ + H + +HRD+K N+L+ E KI DFGLA+ G T +
Sbjct: 142 INGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI 198
Query: 339 M 339
+
Sbjct: 199 I 199
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 66
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 117
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 118 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 158
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 67
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 118
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 119 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 159
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 174 NRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL-----LNNPGQADK---DFRVEVEAI 224
++ ++IG G VV R G AVK + +P Q ++ R E +
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 225 GHVR-HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
V H +++ L+ + LV++ + G L +L ++ L+ + I+
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSL 209
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
+A+++LH +VHRD+K NIL+D+N ++SDFG + L G+
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE 254
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 180 NIIGDGGYGVVYR------GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
+IG G + VV R GQ V V K ++PG + +D + E ++H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 234 RLLGYCIEGTQRILVYEYVNNGNL--EQWLRGDMCDRGYLTWEA----RMKILLGTAKAL 287
LL +V+E+++ +L E R D G++ EA M+ +L +AL
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQIL---EAL 143
Query: 288 AYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKLLG 328
Y H+ ++HRD+K +L+ + + K+ FG+A LG
Sbjct: 144 RYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
KI L T KAL +L E + K++HRDIK SNIL+D + + K+ DFG++
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 92
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 143
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 144 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 94
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 145
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 146 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 185
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L T LV++ + G L +L ++ L+ + KI+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
LH+ +VHRD+K NIL+D++ + K++DFG + L G+
Sbjct: 139 ALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 171 SATNRFSKDN-----IIGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKDFRV---EV 221
+++NR DN ++G G +G V ++ G AVK L + D D E
Sbjct: 15 NSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEK 74
Query: 222 EAIGHVRHKNLVRLLGYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL 280
+ R+ + L C + R+ V E+VN G+L ++ + EAR +
Sbjct: 75 RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-----KSRRFDEARARFY 129
Query: 281 LG-TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
AL +LH+ +++RD+K N+L+D K++DFG+ K
Sbjct: 130 AAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVR 228
++R+ I+G GG V+ + L + VAVK L + + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 229 HKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADAC 126
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI--TTRVMGT 341
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + + T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 92
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 143
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 144 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADK---DFRVEVEAIGHVR 228
++R+ I+G GG V+ + L + VAVK L + + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 229 HKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADAC 126
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI--TTRVMGT 341
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + + T V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L T LV++ + G L +L ++ L+ + KI+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
LH+ +VHRD+K NIL+D++ + K++DFG + L G+
Sbjct: 139 ALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 89
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 140
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L T LV++ + G L +L ++ L+ + KI+ + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT----EKVTLSEKETRKIMRALLEVIC 125
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
LH+ +VHRD+K NIL+D++ + K++DFG + L G+
Sbjct: 126 ALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 165
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++R+ IG G +GV + + K + + D++ + E+ +RH N+
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 76
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
VR + T +V EY + G L + + C+ G + + ++Y H
Sbjct: 77 VRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 293 AIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK 325
+V HRD+K N L+D + KI DFG +K
Sbjct: 133 M---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 164
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 73
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 124
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 125 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 165
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++R+ IG G +GV + + K + + D++ + E+ +RH N+
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
VR + T +V EY + G L + + C+ G + + ++Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 293 AIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK 325
+V HRD+K N L+D + KI+DFG +K
Sbjct: 134 M---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 88
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 139
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 140 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 180
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 137 RPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM 196
+PS+H +PL +P+ L D ++ R+ + +G GG+ Y M
Sbjct: 16 KPSAHVDPKSAPLKEIPD----------VLVDPRT-MKRYMRGRFLGKGGFAKCYEITDM 64
Query: 197 N-----GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEY 251
+ V K +L P Q +K E+ + + ++V G+ + +V E
Sbjct: 65 DTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 252 VNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+L + + R +T + T + + YLH +V+HRD+K N+ ++
Sbjct: 124 CRRRSLLELHK----RRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLN 176
Query: 312 ENFDAKISDFGLA 324
++ D KI DFGLA
Sbjct: 177 DDMDVKIGDFGLA 189
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 88
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---------EIV 139
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 140 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 180
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 137 RPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM 196
+PS+H +PL +P+ L D ++ R+ + +G GG+ Y M
Sbjct: 16 KPSAHVDPKSAPLKEIPD----------VLVDPRT-MKRYMRGRFLGKGGFAKCYEITDM 64
Query: 197 N-----GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEY 251
+ V K +L P Q +K E+ + + ++V G+ + +V E
Sbjct: 65 DTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 252 VNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+L + + R +T + T + + YLH +V+HRD+K N+ ++
Sbjct: 124 CRRRSLLELHK----RRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLN 176
Query: 312 ENFDAKISDFGLA 324
++ D KI DFGLA
Sbjct: 177 DDMDVKIGDFGLA 189
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 137 RPSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM 196
+PS+H +PL +P+ L D ++ R+ + +G GG+ Y M
Sbjct: 16 KPSAHVDPKSAPLKEIPD----------VLVDPRT-MKRYMRGRFLGKGGFAKCYEITDM 64
Query: 197 N-----GTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEY 251
+ V K +L P Q +K E+ + + ++V G+ + +V E
Sbjct: 65 DTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 252 VNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID 311
+L + + R +T + T + + YLH +V+HRD+K N+ ++
Sbjct: 124 CRRRSLLELHK----RRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLN 176
Query: 312 ENFDAKISDFGLA 324
++ D KI DFGLA
Sbjct: 177 DDMDVKIGDFGLA 189
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + ++G G +G V + + ++ A+KK+ + + EV + + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 235 LLGYCIE-------------GTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+E + + EY N L + + ++ W +IL
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+AL+Y+H ++HRD+K NI IDE+ + KI DFGLAK
Sbjct: 127 ----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 176 FSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRV-----EVEAIGHVRH 229
F I+G+G + VV +L A+K L K+ +V E + + + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDH 91
Query: 230 KNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWEARMKILLGTA 284
V+L + + Y NG L +++R + C R Y T E
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFY-TAE--------IV 142
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 182 IGDGGYG-VVYRGQLMNGTAVAVKKL--LNNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
IG+G +G + +G +K++ + ++ R EV + +++H N+V+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR-MKILLGTAKALAYLHEAIEPK 297
E +V +Y G+L + + +G L E + + + AL ++H+ K
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVHDR---K 145
Query: 298 VVHRDIKSSNILIDENFDAKISDFGLAKLLGA 329
++HRDIKS NI + ++ ++ DFG+A++L +
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 13/174 (7%)
Query: 157 HLGWGHWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD 216
+G G F + ++ + +G G + VV R K++N + +D
Sbjct: 12 QMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD 71
Query: 217 F-RVEVEA--IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTW 273
F ++E EA ++H N+VRL E + LV++ V G L + D+ R + +
Sbjct: 72 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAREFYSE 127
Query: 274 EARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFD---AKISDFGLA 324
+ +++AY H +VHR++K N+L+ K++DFGLA
Sbjct: 128 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G+GG+ V + L +G A+K++L + Q ++ + E + H N++RL+ YC+
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 241 E----GTQRILVYEYVNNGNLEQWLRGDMCDRG-YLTWEARMKILLGTAKALAYLHEAIE 295
+ L+ + G L + + D+G +LT + + +LLG + L EAI
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIE-RLKDKGNFLTEDQILWLLLGICRGL----EAIH 151
Query: 296 PK-VVHRDIKSSNILIDENFDAKISDFG 322
K HRD+K +NIL+ + + D G
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 180 NIIGDGGYGVVYRGQLMNGTA-VAVKK---LLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
++IG G YG VY N VA+KK + + + R E+ + ++ ++RL
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIRL 90
Query: 236 LGYCIEGT----QRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
I + + + + +L++ + + +LT E IL ++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIH 146
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
E+ ++HRD+K +N L++++ K+ DFGLA+ + + K
Sbjct: 147 ES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 180 NIIGDGGYGVVYRGQLMNGTA-VAVKK---LLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
++IG G YG VY N VA+KK + + + R E+ + ++ ++RL
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIRL 92
Query: 236 LGYCIEGT----QRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
I + + + + +L++ + + +LT + IL ++H
Sbjct: 93 HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI----FLTEQHVKTILYNLLLGEKFIH 148
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
E+ ++HRD+K +N L++++ KI DFGLA+ + + K
Sbjct: 149 ES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR 228
Q+ N +G G G V++ + G +AVK++ + G +++ R+ ++ ++
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKEENKRILMDLDVVLK 79
Query: 229 HKN---LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAK 285
+ +V+ G I T + E + G + L+ M +G + K+ + K
Sbjct: 80 SHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRM--QGPIPERILGKMTVAIVK 135
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
AL YL E + V+HRD+K SNIL+DE K+ DFG++
Sbjct: 136 ALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEA--IGHV 227
S T+ + IG G + VV R +L G A K + A ++E EA +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
+H N+VRL E LV++ V G L + D+ R Y + + +A+
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAV 116
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFD---AKISDFGLA 324
+ H+ VVHRD+K N+L+ K++DFGLA
Sbjct: 117 LHCHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 12/150 (8%)
Query: 181 IIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEA-----IGHVRHKNLVRL 235
+IG G +G V + K+L K + + + +V+H LV L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
+ V +Y+N G L L+ + C +L AR A AL YLH
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERC---FLEPRARF-YAAEIASALGYLHSL-- 158
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+V+RD+K NIL+D ++DFGL K
Sbjct: 159 -NIVYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR-----GDMCDRGYLTWE 274
E + + + H V+L + + Y NG L +++R + C R Y
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-- 137
Query: 275 ARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
AL YLH ++HRD+K NIL++E+ +I+DFG AK+L
Sbjct: 138 -------EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ---LMNGTAVAVKK--LLNNPGQADKDFRVEVEAIGHV 227
++R+ I+G GG V+ + L AV V + L +P + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR-FRREAQNAAAL 69
Query: 228 RHKNLVRLLGY----CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADA 125
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI--TTRVMGT 341
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + + T V+GT
Sbjct: 126 CQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 176 FSKDNIIGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVR 234
F + ++G G +G V + + ++ A+KK+ + + EV + + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASLNHQYVVR 66
Query: 235 LLGYCIE-------------GTQRILVYEYVNNGNLEQWLRGDMCDRGY-LTWEARMKIL 280
+E + + EY N L + + ++ W +IL
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+AL+Y+H ++HR++K NI IDE+ + KI DFGLAK
Sbjct: 127 ----EALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 178 KDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNLVRLL 236
KD +G+G + + + K+++ +A+ + E+ A+ H N+V+L
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT--QKEITALKLCEGHPNIVKLH 72
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ LV E +N G L + ++ + + + I+ A++++H+
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV--- 125
Query: 297 KVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
VVHRD+K N+L ++N + KI DFG A+L
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ---LMNGTAVAVKK--LLNNPGQADKDFRVEVEAIGHV 227
++R+ I+G GG V+ + L AV V + L +P + FR E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR-FRREAQNAAAL 69
Query: 228 RHKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADA 125
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI--TTRVMGT 341
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + + T V+GT
Sbjct: 126 CQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 182 IGDGGYGVVYR-GQLMNGTAVAVKKLLNNPGQAD-KDFRVEVEAIGHVRHKNLVRLLGYC 239
+G G +G V+ + +G +K + + Q + E+E + + H N++++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 240 IEGTQRILVYEYVNNGNLEQWL-----RGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
+ +V E G L + + RG GY+ +++ ALAY H
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA-----ELMKQMMNALAYFHSQ- 143
Query: 295 EPKVVHRDIKSSNILIDE---NFDAKISDFGLAKLLGAGKSHITTRVMGT 341
VVH+D+K NIL + + KI DFGLA+L + + +T GT
Sbjct: 144 --HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGT 189
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 171 SATNRFSKD----NIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA-- 223
+ RF+ D +G G + VV R T K++N + +D ++E EA
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 224 IGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
++H N+VRL E LV++ V G L + D+ R Y + +
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIHQI 139
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFD---AKISDFGLA 324
+++ ++H+ +VHRD+K N+L+ K++DFGLA
Sbjct: 140 LESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVE 220
+++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 221 VEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR 276
+E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 117
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHIT 335
+A+ + H V+HRDIK NILID N + K+ DFG LL K +
Sbjct: 118 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 171
Query: 336 TRVMGT 341
T GT
Sbjct: 172 TDFDGT 177
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQ---LMNGTAVAVKK--LLNNPGQADKDFRVEVEAIGHV 227
++R+ I+G GG V+ + L AV V + L +P + FR E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR-FRREAQNAAAL 86
Query: 228 RHKNLVRLL----GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGT 283
H +V + G +V EYV+ L + + G +T + ++++
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADA 142
Query: 284 AKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHI--TTRVMGT 341
+AL + H+ ++HRD+K +NI+I K+ DFG+A+ + + + T V+GT
Sbjct: 143 CQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVE 220
+++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 221 VEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR 276
+E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 83 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 139
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHIT 335
+A+ + H V+HRDIK NILID N + K+ DFG LL K +
Sbjct: 140 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 193
Query: 336 TRVMGT 341
T GT
Sbjct: 194 TDFDGT 199
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNGT---AVAVKKLLNNPGQADKD---FRVEVEA 223
++ ++F ++G G +G V+ + ++G+ + K+L +D ++E +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 224 IGHVRHKNLVRL-LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
+ V H +V+L + EG + L+ +++ G+L L ++ T E L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAE 134
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A AL +LH +++RD+K NIL+DE K++DFGL+K
Sbjct: 135 LALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEA--IGHVRHKNLVRLLGY 238
+G G + VV R +++ G A K + A ++E EA ++H N+VRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
E L+++ V G L + D+ R Y + + +A+ + H+ V
Sbjct: 90 ISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCHQM---GV 142
Query: 299 VHRDIKSSNILIDENFD---AKISDFGLA 324
VHRD+K N+L+ K++DFGLA
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVE 220
+++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 221 VEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR 276
+E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 117
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHIT 335
+A+ + H V+HRDIK NILID N + K+ DFG LL K +
Sbjct: 118 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 171
Query: 336 TRVMGT 341
T GT
Sbjct: 172 TDFDGT 177
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADKDFRVEVEAIGH-- 226
++R+ IG G +GV +LM + VAVK + A V+ E I H
Sbjct: 18 SDRYELVKDIGSGNFGV---ARLMRDKQSNELVAVKYIERGEKIAAN---VKREIINHRS 71
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKA 286
+RH N+VR + T +V EY + G L + + C+ G + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISG 127
Query: 287 LAYLHEAIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK 325
++Y H +V HRD+K N L+D + KI DFG +K
Sbjct: 128 VSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 165
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVE 220
+++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 221 VEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR 276
+E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELA 117
Query: 277 MKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHIT 335
+A+ + H V+HRDIK NILID N + K+ DFG LL K +
Sbjct: 118 RSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVY 171
Query: 336 TRVMGT 341
T GT
Sbjct: 172 TDFDGT 177
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 180 NIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNLVRLLG 237
++G+G Y V L NG AVK + G + EVE + + +KN++ L+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 238 YCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK 297
+ + T+ LV+E + G++ ++ + + +++ A AL +LH
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQ----KQKHFNEREASRVVRDVAAALDFLHTK---G 131
Query: 298 VVHRDIKSSNILIDEN---FDAKISDFGL 323
+ HRD+K NIL + KI DF L
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDL 160
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNGT---AVAVKKLLNNPGQADKD---FRVEVEA 223
++ ++F ++G G +G V+ + ++G+ + K+L +D ++E +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 224 IGHVRHKNLVRL-LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
+ V H +V+L + EG + L+ +++ G+L L ++ T E L
Sbjct: 80 LVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAE 134
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A AL +LH +++RD+K NIL+DE K++DFGL+K
Sbjct: 135 LALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E + Q L + +RG L E
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPV---QDLFDFITERGALQEELAR 117
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 118 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 171
Query: 337 RVMGT 341
GT
Sbjct: 172 DFDGT 176
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLMNGT---AVAVKKLLNNPGQADKD---FRVEVEA 223
++ ++F ++G G +G V+ + ++G+ + K+L +D ++E +
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 224 IGHVRHKNLVRL-LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
+ V H +V+L + EG + L+ +++ G+L L ++ T E L
Sbjct: 81 LVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAE 135
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A AL +LH +++RD+K NIL+DE K++DFGL+K
Sbjct: 136 LALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 181 IIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRV---EVEAIGHVRHKNLVRLLG 237
++G G +G V + + K++N +KD EVE + + H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 238 YCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK 297
+ + +V E G L ++ R + +I+ + Y+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 298 VVHRDIKSSNILI---DENFDAKISDFGLA 324
+VHRD+K NIL+ +++ D KI DFGL+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 174 NRFSKDNIIGDGGYGVVYRGQLMN-----GTAVAVKKLLNNPGQADKDFRVEVEAIGHVR 228
R+ + +G GG+ Y M+ V K +L P Q +K E+ +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLD 84
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
+ ++V G+ + +V E +L + + R +T + T + +
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK----RRKAVTEPEARYFMRQTIQGVQ 140
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
YLH +V+HRD+K N+ ++++ D KI DFGLA
Sbjct: 141 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 33/185 (17%)
Query: 174 NRFSKDNIIGDGGYGVVY------RGQLMNGTAVAVKKLLNNPGQA---DKDFRVEVEAI 224
N FS IIG GG+G VY G++ + K++ G+ ++ + + +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 225 GHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK----- 278
G + + Y ++ + + +N G+L L G + EA M+
Sbjct: 248 GDC---PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFS-EADMRFYAAE 299
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
I+LG L ++H VV+RD+K +NIL+DE+ +ISD GLA K H +
Sbjct: 300 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 349
Query: 339 MGTFG 343
+GT G
Sbjct: 350 VGTHG 354
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 155 FSHLGWGHWFTLRDLQSATNR--FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQ 212
+L W FT + Q +R F +IG G +G V +L N V K+LN
Sbjct: 53 LEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM 112
Query: 213 ADKD----FRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNL-------EQWL 261
+ FR E + + + K + L + LV +Y G+L E L
Sbjct: 113 LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL 172
Query: 262 RGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDF 321
+M R YL A M I + + L Y VHRDIK NIL+D N +++DF
Sbjct: 173 PEEMA-RFYL---AEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADF 219
Query: 322 G-LAKLLGAG 330
G KL+ G
Sbjct: 220 GSCLKLMEDG 229
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 33/185 (17%)
Query: 174 NRFSKDNIIGDGGYGVVY------RGQLMNGTAVAVKKLLNNPGQA---DKDFRVEVEAI 224
N FS IIG GG+G VY G++ + K++ G+ ++ + + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 225 GHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK----- 278
G + + Y ++ + + +N G+L L G + EA M+
Sbjct: 249 GDC---PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFS-EADMRFYAAE 300
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
I+LG L ++H VV+RD+K +NIL+DE+ +ISD GLA K H +
Sbjct: 301 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 350
Query: 339 MGTFG 343
+GT G
Sbjct: 351 VGTHG 355
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 33/185 (17%)
Query: 174 NRFSKDNIIGDGGYGVVY------RGQLMNGTAVAVKKLLNNPGQA---DKDFRVEVEAI 224
N FS IIG GG+G VY G++ + K++ G+ ++ + + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 225 GHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK----- 278
G + + Y ++ + + +N G+L L G + EA M+
Sbjct: 249 GDC---PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFS-EADMRFYAAE 300
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
I+LG L ++H VV+RD+K +NIL+DE+ +ISD GLA K H +
Sbjct: 301 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 350
Query: 339 MGTFG 343
+GT G
Sbjct: 351 VGTHG 355
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 33/185 (17%)
Query: 174 NRFSKDNIIGDGGYGVVY------RGQLMNGTAVAVKKLLNNPGQA---DKDFRVEVEAI 224
N FS IIG GG+G VY G++ + K++ G+ ++ + + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 225 GHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK----- 278
G + + Y ++ + + +N G+L L G + EA M+
Sbjct: 249 GDC---PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS----QHGVFS-EADMRFYAAE 300
Query: 279 ILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRV 338
I+LG L ++H VV+RD+K +NIL+DE+ +ISD GLA K H +
Sbjct: 301 IILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--- 350
Query: 339 MGTFG 343
+GT G
Sbjct: 351 VGTHG 355
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++R+ IG G +GV + + K + + D++ + E+ +RH N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
VR + T +V EY + G L + + C+ G + + ++Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 293 AIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK 325
+V HRD+K N L+D + KI FG +K
Sbjct: 134 M---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHVRHKNLVRLLGY 238
+G G + VV R K++N + +DF ++E EA ++H N+VRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
E + LV++ V G L + D+ R + + + +++AY H +
Sbjct: 74 IQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESIAYCHSN---GI 126
Query: 299 VHRDIKSSNILIDENFD---AKISDFGLA 324
VHR++K N+L+ K++DFGLA
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 175 RFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRV---EVEAIGHVRHKN 231
R++ ++G G +G V + + K++N +KD EVE + + H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+++L + + +V E G L ++ R + +I+ + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 292 EAIEPKVVHRDIKSSNILI---DENFDAKISDFGLA 324
+ +VHRD+K NIL+ +++ D KI DFGL+
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
++R+ IG G +GV + + K + + D++ + E+ +RH N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNI 77
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHE 292
VR + T +V EY + G L + + C+ G + + ++Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 293 AIEPKVVHRDIKSSNILIDENFDA--KISDFGLAK 325
+V HRD+K N L+D + KI FG +K
Sbjct: 134 M---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 175 RFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRV---EVEAIGHVRHKN 231
R++ ++G G +G V + + K++N +KD EVE + + H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+++L + + +V E G L ++ R + +I+ + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 292 EAIEPKVVHRDIKSSNILI---DENFDAKISDFGLA 324
+ +VHRD+K NIL+ +++ D KI DFGL+
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHVRHKNLVRLLGY 238
+G G + VV R K++N + +DF ++E EA ++H N+VRL
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
E + LV++ V G L + D+ R + + + +++AY H +
Sbjct: 73 IQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESIAYCHSN---GI 125
Query: 299 VHRDIKSSNILIDENFD---AKISDFGLA 324
VHR++K N+L+ K++DFGLA
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 70/164 (42%), Gaps = 15/164 (9%)
Query: 168 DLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEA 223
D + N F ++G G +G V+ + G A+K L A + E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 224 IGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-L 281
+ + RH L L Y + R+ V EY N G L L R + E R +
Sbjct: 64 LQNTRHPFLT-ALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGA 117
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
AL YLH VV+RDIK N+++D++ KI+DFGL K
Sbjct: 118 EIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 180 NIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRHKNLVRL 235
++G GG+G V+ Q+ G A KKL + K ++ VE + + V H +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVS 249
Query: 236 LGYCIEG-TQRILVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKILLGTAKALAYLHEA 293
L Y E T LV +N G++ + D + G+ + + TA+ ++ L
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF----QEPRAIFYTAQIVSGLEHL 305
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
+ +++RD+K N+L+D++ + +ISD GLA L AG++ T GT G
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPG 354
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 168 DLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEA 223
D + N F ++G G +G V+ + G A+K L A + E
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 224 IGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-L 281
+ + RH L L Y + R+ V EY N G L L R + E R +
Sbjct: 64 LQNSRHPFLT-ALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGA 117
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
AL YLH E VV+RD+K N+++D++ KI+DFGL K
Sbjct: 118 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 117
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 118 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 171
Query: 337 RVMGT 341
GT
Sbjct: 172 DFDGT 176
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHVRHKNLVRLLGY 238
+G G + VV R K++N + +DF ++E EA ++H N+VRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
E + LV++ V G L + D+ R + + + +++AY H +
Sbjct: 74 IQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESIAYCHSN---GI 126
Query: 299 VHRDIKSSNILIDENFD---AKISDFGLA 324
VHR++K N+L+ K++DFGLA
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 180 NIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRHKNLVRL 235
++G GG+G V+ Q+ G A KKL + K ++ VE + + V H +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVS 249
Query: 236 LGYCIEG-TQRILVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKILLGTAKALAYLHEA 293
L Y E T LV +N G++ + D + G+ + + TA+ ++ L
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF----QEPRAIFYTAQIVSGLEHL 305
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
+ +++RD+K N+L+D++ + +ISD GLA L AG++ T GT G
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPG 354
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 132
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 133 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 186
Query: 337 RVMGT 341
GT
Sbjct: 187 DFDGT 191
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 180 NIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRHKNLVRL 235
++G GG+G V+ Q+ G A KKL + K ++ VE + + V H +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVS 249
Query: 236 LGYCIEG-TQRILVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKILLGTAKALAYLHEA 293
L Y E T LV +N G++ + D + G+ + + TA+ ++ L
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF----QEPRAIFYTAQIVSGLEHL 305
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
+ +++RD+K N+L+D++ + +ISD GLA L AG++ T GT G
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPG 354
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 133
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 134 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 187
Query: 337 RVMGT 341
GT
Sbjct: 188 DFDGT 192
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 180 NIIGDGGYGVVYRGQL-MNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRHKNLVRL 235
++G GG+G V+ Q+ G A KKL + K ++ VE + + V H +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVS 249
Query: 236 LGYCIEG-TQRILVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKILLGTAKALAYLHEA 293
L Y E T LV +N G++ + D + G+ + + TA+ ++ L
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF----QEPRAIFYTAQIVSGLEHL 305
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGTFG 343
+ +++RD+K N+L+D++ + +ISD GLA L AG++ T GT G
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPG 354
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 152
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 153 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 206
Query: 337 RVMGT 341
GT
Sbjct: 207 DFDGT 211
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 132
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 133 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 186
Query: 337 RVMGT 341
GT
Sbjct: 187 DFDGT 191
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 146
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 147 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 200
Query: 337 RVMGT 341
GT
Sbjct: 201 DFDGT 205
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 145
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 146 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 199
Query: 337 RVMGT 341
GT
Sbjct: 200 DFDGT 204
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 133
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 134 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 187
Query: 337 RVMGT 341
GT
Sbjct: 188 DFDGT 192
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 146
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 147 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 200
Query: 337 RVMGT 341
GT
Sbjct: 201 DFDGT 205
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 146
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 147 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 200
Query: 337 RVMGT 341
GT
Sbjct: 201 DFDGT 205
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 160
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 161 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 214
Query: 337 RVMGT 341
GT
Sbjct: 215 DFDGT 219
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLT-ALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH VV+RDIK N+++D++ KI+DFGL K
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 34 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 86
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 138
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+V+HRD+K N+ ++E+ + KI DFGLA
Sbjct: 139 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 146
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 147 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 200
Query: 337 RVMGT 341
GT
Sbjct: 201 DFDGT 205
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 145
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 146 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 199
Query: 337 RVMGT 341
GT
Sbjct: 200 DFDGT 204
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 160
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 161 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 214
Query: 337 RVMGT 341
GT
Sbjct: 215 DFDGT 219
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 133
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 134 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 187
Query: 337 RVMGT 341
GT
Sbjct: 188 DFDGT 192
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 145
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 146 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 199
Query: 337 RVMGT 341
GT
Sbjct: 200 DFDGT 204
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 145
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 146 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 199
Query: 337 RVMGT 341
GT
Sbjct: 200 DFDGT 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 68 PFLT-ALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 121
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH VV+RDIK N+++D++ KI+DFGL K
Sbjct: 122 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLT-ALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH VV+RDIK N+++D++ KI+DFGL K
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEV 221
++ + +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 222 EAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
E + + ++RLL + +L+ E Q L + +RG L E
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 165
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITT 336
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 166 SFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 219
Query: 337 RVMGT 341
GT
Sbjct: 220 DFDGT 224
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 52 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 104
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 156
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+V+HRD+K N+ ++E+ + KI DFGLA
Sbjct: 157 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 30 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+V+HRD+K N+ ++E+ + KI DFGLA
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 30 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 82
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 134
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+V+HRD+K N+ ++E+ + KI DFGLA
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 54 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 106
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLT-WEARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 158
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+V+HRD+K N+ ++E+ + KI DFGLA
Sbjct: 159 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLT-ALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH VV+RDIK N+++D++ KI+DFGL K
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGT 341
V+HRDIK NILID N + K+ DFG LL K + T GT
Sbjct: 128 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGT 172
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 173 TNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV---R 228
T F + IG G +G V++ + ++G A+K+ + + E H +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK-ILLGTAKAL 287
H ++VR E ++ EY N G+L + + Y EA +K +LL + L
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK-EAELKDLLLQVGRGL 124
Query: 288 AYLHEAIEPKVVHRDIKSSNILI 310
Y+H +VH DIK SNI I
Sbjct: 125 RYIHSM---SLVHMDIKPSNIFI 144
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 174 NRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR 228
+++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 229 ----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA 284
++RLL + +L+ E Q L + +RG L E
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGT 341
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T GT
Sbjct: 121 EAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGT 172
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 173 TNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV---R 228
T F + IG G +G V++ + ++G A+K+ + + E H +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK-ILLGTAKAL 287
H ++VR E ++ EY N G+L + + Y EA +K +LL + L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK-EAELKDLLLQVGRGL 126
Query: 288 AYLHEAIEPKVVHRDIKSSNILI 310
Y+H +VH DIK SNI I
Sbjct: 127 RYIHSM---SLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 173 TNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV---R 228
T F + IG G +G V++ + ++G A+K+ + + E H +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK-ILLGTAKAL 287
H ++VR E ++ EY N G+L + + Y EA +K +LL + L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK-EAELKDLLLQVGRGL 126
Query: 288 AYLHEAIEPKVVHRDIKSSNILI 310
Y+H +VH DIK SNI I
Sbjct: 127 RYIHSM---SLVHMDIKPSNIFI 146
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
F+K I D V+ G+++ K LL P Q +K +E+ + H+++V
Sbjct: 28 FAKCFEISDADTKEVFAGKIVP------KSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 80
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTW-EARM---KILLGTAKALAYLH 291
G+ + +V E +L + + R LT EAR +I+LG YLH
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQ----YLH 132
Query: 292 EAIEPKVVHRDIKSSNILIDENFDAKISDFGLA 324
+V+HRD+K N+ ++E+ + KI DFGLA
Sbjct: 133 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 19/182 (10%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAI 224
+ +++ ++G GG+G VY G ++ + VA+K + +++ G+ RV +E +
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 225 GHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL 280
+ ++RLL + +L+ E Q L + +RG L E
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFF 119
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVM 339
+A+ + H V+HRDIK NILID N + K+ DFG LL K + T
Sbjct: 120 WQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 173
Query: 340 GT 341
GT
Sbjct: 174 GT 175
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 173 TNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHV---R 228
T F + IG G +G V++ + ++G A+K+ + + E H +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK-ILLGTAKAL 287
H ++VR E ++ EY N G+L + + Y EA +K +LL + L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK-EAELKDLLLQVGRGL 128
Query: 288 AYLHEAIEPKVVHRDIKSSNILI 310
Y+H +VH DIK SNI I
Sbjct: 129 RYIHSM---SLVHMDIKPSNIFI 148
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLT-ALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH VV+RDIK N+++D++ KI+DFGL K
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 24/169 (14%)
Query: 176 FSKDNIIGDGGYGVVYRGQLMNGTAV-AVKKLLNNPGQADKDFR---VEVEAIGHV-RHK 230
F ++G G +G V+ + A+K L + D D VE + H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 231 NLVRLLGYCIEGTQR--ILVYEYVNNGNLEQWLRGDMC---DRGYLTWEARMKILLGTAK 285
L + +C T+ V EY+N G+L ++ C D T+ A +I+LG
Sbjct: 80 FLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYA-AEIILG--- 131
Query: 286 ALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK--LLGAGKS 332
L +LH +V+RD+K NIL+D++ KI+DFG+ K +LG K+
Sbjct: 132 -LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 176
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 69 PFLT-ALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSAL 122
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH E VV+RD+K N+++D++ KI+DFGL K
Sbjct: 123 DYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKD---FRVEVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + D EV+ + +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L + + LV E G L ++ R + +I+ +
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 146
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGK 331
Y+H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 189
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 109
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 327 LGAG 330
+ G
Sbjct: 167 IDFG 170
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 19/160 (11%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+R + G AVKK+ +A+ E+ A + +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 155
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKVV 299
EG + E + G+L Q ++ ++G L E R LG A + L YLH +++
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVK----EQGCLP-EDRALYYLGQALEGLEYLHSR---RIL 207
Query: 300 HRDIKSSNILIDEN-FDAKISDFGLAKLL---GAGKSHIT 335
H D+K+ N+L+ + A + DFG A L G GKS +T
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 65 PFLT-ALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH VV+RDIK N+++D++ KI+DFGL K
Sbjct: 119 EYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 109
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 327 LGAG 330
+ G
Sbjct: 167 IDFG 170
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 180 NIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPG---QADKDFRVEVEAIGHVRHKNLVRLL 236
+I+G G V+RG+ + K+ NN D R E E + + HKN+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
E T R +L+ E+ G+L L + Y E+ I+L + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVL--RDVVGGMNHLR 129
Query: 295 EPKVVHRDIKSSNIL--IDENFDA--KISDFGLAKLL 327
E +VHR+IK NI+ I E+ + K++DFG A+ L
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 68 PFLT-ALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSAL 121
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH E VV+RD+K N+++D++ KI+DFGL K
Sbjct: 122 DYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRH-KNLVRLLGYC 239
+G G Y V+ + N V VK L P + +K + E++ + ++R N++ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKIL--KPVKKNK-IKREIKILENLRGGPNIITLADIV 101
Query: 240 IEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPK 297
+ R LV+E+VNN + +Q L + D ++ R + KAL Y H
Sbjct: 102 KDPVSRTPALVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---G 151
Query: 298 VVHRDIKSSNILID-ENFDAKISDFGLAKLLGAGKSH 333
++HRD+K N++ID E+ ++ D+GLA+ G+ +
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 180 NIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPG---QADKDFRVEVEAIGHVRHKNLVRLL 236
+I+G G V+RG+ + K+ NN D R E E + + HKN+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 237 GYCIEGTQR--ILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAI 294
E T R +L+ E+ G+L L + Y E+ I+L + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVL--RDVVGGMNHLR 129
Query: 295 EPKVVHRDIKSSNIL--IDENFDA--KISDFGLAKLL 327
E +VHR+IK NI+ I E+ + K++DFG A+ L
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLM--NGTAVAVK-KLLNNPGQADKD---FRV 219
L D+ +F+ ++G G +G V QL +G+ V V K+L A D F
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQR------ILVYEYVNNGNLEQWLRGDMCDRGY--L 271
E + H ++ +L+G + + +++ ++ +G+L +L L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 272 TWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
+ ++ ++ A + YL +HRD+ + N ++ E+ ++DFGL++ + +G
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 332 SH 333
+
Sbjct: 192 YY 193
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 19/171 (11%)
Query: 181 IIGDGGYGVVYRG-QLMNGTAVAVKKL----LNNPGQADKDFRVEVEAIGHVR----HKN 231
++G GG+G VY G ++ + VA+K + +++ G+ RV +E + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 232 LVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
++RLL + +L+ E Q L + +RG L E +A+ + H
Sbjct: 71 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 292 EAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSHITTRVMGT 341
V+HRDIK NILID N + K+ DFG LL K + T GT
Sbjct: 128 NX---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGT 172
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 208 PFLT-ALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSAL 261
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH E VV+RD+K N+++D++ KI+DFGL K
Sbjct: 262 DYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + ++ EV + +RH N++ L T +L+ E V+ G L +L ++
Sbjct: 49 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKES 104
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFD---AKISDFGLAKL 326
LT + + L + YLH ++ H D+K NI L+D+N K+ DFG+A
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161
Query: 327 LGAG 330
+ AG
Sbjct: 162 IEAG 165
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFR---VEVEAIGHVRH 229
N F ++G G +G V+ + G A+K L A + E + + RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 230 KNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKIL-LGTAKAL 287
L L Y + R+ V EY N G L L R + E R + AL
Sbjct: 211 PFLT-ALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSAL 264
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH E VV+RD+K N+++D++ KI+DFGL K
Sbjct: 265 DYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + ++ EV + +RH N++ L T +L+ E V+ G L +L ++
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKES 125
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFD---AKISDFGLAKL 326
LT + + L + YLH ++ H D+K NI L+D+N K+ DFG+A
Sbjct: 126 LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 182
Query: 327 LGAG 330
+ AG
Sbjct: 183 IEAG 186
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + ++ EV + +RH N++ L T +L+ E V+ G L +L ++
Sbjct: 56 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKES 111
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFD---AKISDFGLAKL 326
LT + + L + YLH ++ H D+K NI L+D+N K+ DFG+A
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 327 LGAG 330
+ AG
Sbjct: 169 IEAG 172
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNN--PGQADKDFRV-EVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + DK+ + EV+ + +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L + + LV E G L ++ R + +I+ +
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGK 331
Y+H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K
Sbjct: 141 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 181 IIGDGGYGVVYRGQLMNGTAV-AVKKLLNNPGQADKDFR---VEVEAIGHV-RHKNLVRL 235
++G G +G V+ + A+K L + D D VE + H L +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 236 LGYCIEGTQR--ILVYEYVNNGNLEQWLRGDMC---DRGYLTWEARMKILLGTAKALAYL 290
+C T+ V EY+N G+L ++ C D T+ A +I+LG L +L
Sbjct: 84 --FCTFQTKENLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYA-AEIILG----LQFL 134
Query: 291 HEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK--LLGAGKS 332
H +V+RD+K NIL+D++ KI+DFG+ K +LG K+
Sbjct: 135 HSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 175
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNN--PGQADKDFRV-EVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + DK+ + EV+ + +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L + + LV E G L ++ R + +I+ +
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 163
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGK 331
Y+H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K
Sbjct: 164 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 206
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNN--PGQADKDFRV-EVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + DK+ + EV+ + +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+++L + + LV E G L ++ R + +I+ +
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 164
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGK 331
Y+H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K
Sbjct: 165 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 207
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 173 TNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNL 232
T+ + IG G Y V R + T + + + + D +E+ + + +H N+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRC-IHKATNMEFAVKIIDKSKRDPTEEIEI-LLRYGQHPNI 78
Query: 233 VRLLGYCIEGTQRILVYEYVNNGNL-EQWLRGDMCDRGYLTWEARMKILLGTAKALAYLH 291
+ L +G +V E + G L ++ LR + + + +L K + YLH
Sbjct: 79 ITLKDVYDDGKYVYVVTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLH 133
Query: 292 EAIEPKVVHRDIKSSNIL-IDENFDA---KISDFGLAKLLGA 329
VVHRD+K SNIL +DE+ + +I DFG AK L A
Sbjct: 134 AQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 220 EVEAIGHVRHKNLVRLLGYCIEGTQR--ILVYEYVNNGNLEQ--WLRGDMCDRGYLTWEA 275
E+ + + H N+V+L+ + + +V+E VN G + + L+ D+ ++
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
+K + YLH K++HRDIK SN+L+ E+ KI+DFG++ G +
Sbjct: 146 LIK-------GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALL 194
Query: 336 TRVMGT 341
+ +GT
Sbjct: 195 SNTVGT 200
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 182 IGDGGYGVVYRGQ--------LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
+G G + +++G ++ T V +K L + F + + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEA 293
G C+ G + ILV E+V G+L+ +L+ ++ + ++++ A A+ +L E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 294 IEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
++H ++ + NIL+ D K + KL G S
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 182 IGDGGYGVVYRGQ--------LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLV 233
+G G + +++G ++ T V +K L + F + + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAY-LHE 292
G C G + ILV E+V G+L+ +L+ + L W+ L AK LA+ +H
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-WK------LEVAKQLAWAMHF 128
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKS 332
E ++H ++ + NIL+ D K + KL G S
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKD-----FRVEVEAIGHVRHKNLVRLL 236
IG G +G V Q + + K +N +++ F+ E++ + + H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQGLEHPFLVNLW 81
Query: 237 GYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEP 296
+ +V + + G+L L+ ++ + E + AL YL
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQ--- 134
Query: 297 KVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITT 336
+++HRD+K NIL+DE+ I+DF +A +L ++ ITT
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT 173
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 211 GQADKDFRVEVEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGY 270
G + +D EV + ++H N++ L T IL+ E V G L +L ++
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL----AEKES 110
Query: 271 LTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNI-LIDENFDA---KISDFGLAKL 326
LT E + L + YLH ++ H D+K NI L+D N KI DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 327 LGAG 330
+ G
Sbjct: 168 IDFG 171
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNP-GQADKDFRVEVE-AIGHVRHKNLVRLLGY 238
+G G YGVV + + + +G +AVK++ Q K ++++ ++ V V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM-KILLGTAKALAYLHEAIEPK 297
+ E ++ +L+++ + + D+G E + KI + KAL +LH +
Sbjct: 119 LFREGDVWICMELMDT-SLDKFYK-QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 174
Query: 298 VVHRDIKSSNILIDENFDAKISDFGLAKLL 327
V+HRD+K SN+LI+ K+ DFG++ L
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYL 204
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q LR + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LRQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVE-VEAIGHVRHKNLVRLLGYC 239
+G G +G V+R + G AVKK+ + FRVE + A + +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKV 298
EG + E + G+L Q ++ C E R LG A + L YLH ++
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGC-----LPEDRALYYLGQALEGLEYLHTR---RI 171
Query: 299 VHRDIKSSNILIDENFD-AKISDFGLAKLL---GAGKSHIT 335
+H D+K+ N+L+ + A + DFG A L G GKS +T
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVE-VEAIGHVRHKNLVRLLGYC 239
+G G +G V+R + G AVKK+ + FRVE + A + +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKV 298
EG + E + G+L Q ++ C E R LG A + L YLH ++
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGC-----LPEDRALYYLGQALEGLEYLHTR---RI 187
Query: 299 VHRDIKSSNILIDENFD-AKISDFGLAKLL---GAGKSHIT 335
+H D+K+ N+L+ + A + DFG A L G GKS +T
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 182 IGDGGYGVVYR------GQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRL 235
+G G + VV R GQ + KKL + + E ++H N+VRL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKLEREARICRLLKHPNIVRL 75
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
E L+++ V G L + D+ R Y + + +A+ + H+
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCHQM-- 129
Query: 296 PKVVHRDIKSSNILIDENFD---AKISDFGLA 324
VVHR++K N+L+ K++DFGLA
Sbjct: 130 -GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 173 TNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAI-GHVRHK 230
T+ + IG G Y V R AVK + ++ +D E+E + + +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKII----DKSKRDPTEEIEILLRYGQHP 76
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNL-EQWLRGDMCDRGYLTWEARMKILLGTAKALAY 289
N++ L +G +V E G L ++ LR + + + +L K + Y
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILR-----QKFFSEREASAVLFTITKTVEY 131
Query: 290 LHEAIEPKVVHRDIKSSNIL-IDENFDA---KISDFGLAKLLGA 329
LH VVHRD+K SNIL +DE+ + +I DFG AK L A
Sbjct: 132 LHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVE-VEAIGHVRHKNLVRLLGYC 239
+G G +G V+R + G AVKK+ + FRVE + A + +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 240 IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKV 298
EG + E + G+L Q ++ C E R LG A + L YLH ++
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGC-----LPEDRALYYLGQALEGLEYLHTR---RI 185
Query: 299 VHRDIKSSNILIDENFD-AKISDFGLAKLL---GAGKSHIT 335
+H D+K+ N+L+ + A + DFG A L G GKS +T
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 75/190 (39%), Gaps = 51/190 (26%)
Query: 182 IGDGGYGVVYRGQLMNGT-AVAVKKLLN-------NPGQADKDFRVEVEAIGHVRHKNLV 233
IG G YGVV R + N T A+ K++N NP ++ + EV + + H N+
Sbjct: 34 IGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVER-IKTEVRLMKKLHHPNIA 91
Query: 234 RLLGYCIEGTQRILVYEYVNNGNLEQWL----------------RGDMCD---------- 267
RL + LV E + G+L L + +C
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 268 ------RGYLTWEARMKILLGTAK----ALAYLHEAIEPKVVHRDIKSSNILIDEN--FD 315
R L + R K++ + AL YLH + HRDIK N L N F+
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFE 208
Query: 316 AKISDFGLAK 325
K+ DFGL+K
Sbjct: 209 IKLVDFGLSK 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 34/168 (20%)
Query: 182 IGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK---------------DFRVEVEAIGH 226
+G G YG V + NG + K++ Q DK + E+ +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIK-KSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 227 VRHKNLVRLLGYCIEGTQRILVYEYVNNGNL-EQWL---RGDMCDRGYLTWEARMKILLG 282
+ H N+++L + LV E+ G L EQ + + D CD + MK +L
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANI-----MKQILS 157
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDEN---FDAKISDFGLAKLL 327
+ YLH+ +VHRDIK NIL++ + KI DFGL+
Sbjct: 158 ---GICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNP-GQADKDFRVEVE-AIGHVRHKNLVRLLGY 238
+G G YGVV + + + +G +AVK++ Q K ++++ ++ V V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARM-KILLGTAKALAYLHEAIEPK 297
+ E ++ +L+++ + + D+G E + KI + KAL +LH +
Sbjct: 75 LFREGDVWICMELMDT-SLDKFYK-QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 130
Query: 298 VVHRDIKSSNILIDENFDAKISDFGLAKLL 327
V+HRD+K SN+LI+ K+ DFG++ L
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYL 160
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 182 IGDGGYGVVYRGQ-LMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYCI 240
+G G +G V+R + G AVKK+ +A+ E+ A + +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 136
Query: 241 EGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTA-KALAYLHEAIEPKVV 299
EG + E + G+L Q ++ ++G L E R LG A + L YLH +++
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVK----EQGCLP-EDRALYYLGQALEGLEYLHSR---RIL 188
Query: 300 HRDIKSSNILIDEN-FDAKISDFGLAKLL---GAGKSHIT 335
H D+K+ N+L+ + A + DFG A L G GK +T
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 212 QADKDFRVEVEAI-GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNL-EQWLRGDMCDRG 269
++ +D E+E + + +H N++ L +G LV E + G L ++ LR +
Sbjct: 62 KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR-----QK 116
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNIL-IDENFDA---KISDFGLAK 325
+ + +L K + YLH VVHRD+K SNIL +DE+ + +I DFG AK
Sbjct: 117 FFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 326 LLGA 329
L A
Sbjct: 174 QLRA 177
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 212 QADKDFRVEVEAI-GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNL-EQWLRGDMCDRG 269
++ +D E+E + + +H N++ L +G LV E + G L ++ LR +
Sbjct: 62 KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR-----QK 116
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNIL-IDENFDA---KISDFGLAK 325
+ + +L K + YLH VVHRD+K SNIL +DE+ + +I DFG AK
Sbjct: 117 FFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 326 LLGA 329
L A
Sbjct: 174 QLRA 177
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHV 227
S T+ + +G G + VV R + K++N + +D ++E EA +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
+H N+VRL E LV++ V G L + D+ R Y + + +++
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILESV 116
Query: 288 AYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLA 324
+ H +VHRD+K N+L+ + K++DFGLA
Sbjct: 117 NHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 171 SATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADKDF-RVEVEA--IGHV 227
S T+ + +G G + VV R + K++N + +D ++E EA +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 228 RHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
+H N+VRL E LV++ V G L + D+ R Y + + +++
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILESV 116
Query: 288 AYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLA 324
+ H +VHRD+K N+L+ + K++DFGLA
Sbjct: 117 NHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 182 IGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC- 239
+ + G +++G+ N V V K+ + + +DF E + H N++ +LG C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 240 -IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR-MKILLGTAKALAYLHEAIEPK 297
L+ ++ G+L L ++ +++ +K L A+ +A+LH +EP
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLH-TLEPL 133
Query: 298 VVHRDIKSSNILIDENFDAKIS 319
+ + S +++IDE+ A+IS
Sbjct: 134 IPRHALNSRSVMIDEDMTARIS 155
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 173 TNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNN--PGQADKDFRV-EVEAIGHVR 228
++R+ ++G G +G V+ + G AVK + + DK+ + EV+ + +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 229 HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
H N+ +L + + LV E G L ++ R + +I+ +
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 289 YLHEAIEPKVVHRDIKSSNILID---ENFDAKISDFGLAKLLGAGK 331
Y H+ K+VHRD+K N+L++ ++ + +I DFGL+ A K
Sbjct: 141 YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 173 TNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVK-----KLLNNPGQADKDF---RVEVEA 223
+ ++S + +G G +G V+ V VK K+L + D +E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 224 IGHVRHKNLVRLLG-YCIEGTQRILVYEYVNNGNLEQWL-RGDMCDRGYLTWEARMKILL 281
+ V H N++++L + +G ++++ ++ + +L ++ R D ++ R +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV-- 140
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHIT 335
A+ YL ++HRDIK NI+I E+F K+ DFG A L GK T
Sbjct: 141 ---SAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 13/166 (7%)
Query: 181 IIGDGGYGVVYRGQLMNGTAV----AVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+IG G Y V +L + VKK L N + + E + + L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 237 GYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
C + R+ V EYVN G+L M + L E + AL YLHE
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLHER-- 125
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+++RD+K N+L+D K++D+G+ K G T+ GT
Sbjct: 126 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGT 169
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 170 QSATNRFSKDNIIGDGGYGVVYRGQLM----NGTAVAVKKLLNNPGQADKDFRVEVE--A 223
++ + F ++G G +G V+ + + +G A+K L + R ++E
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 224 IGHVRHKNLVRL-LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLG 282
+ V H +V+L + EG + L+ +++ G+L L ++ T E L
Sbjct: 84 LADVNHPFVVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAE 138
Query: 283 TAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
A L +LH +++RD+K NIL+DE K++DFGL+K
Sbjct: 139 LALGLDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK 178
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + IG G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ K++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 13/166 (7%)
Query: 181 IIGDGGYGVVYRGQLMNGTAV----AVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+IG G Y V +L + VKK L N + + E + + L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 237 GYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
C + R+ V EYVN G+L M + L E + AL YLHE
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLHER-- 129
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+++RD+K N+L+D K++D+G+ K G T+ GT
Sbjct: 130 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGT 173
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 13/166 (7%)
Query: 181 IIGDGGYGVVYRGQLMNGTAV----AVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+IG G Y V +L + VKK L N + + E + + L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 237 GYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
C + R+ V EYVN G+L M + L E + AL YLHE
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLHER-- 140
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+++RD+K N+L+D K++D+G+ K G T+ GT
Sbjct: 141 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGT 184
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 13/166 (7%)
Query: 181 IIGDGGYGVVYRGQLMNGTAV----AVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLL 236
+IG G Y V +L + VKK L N + + E + + L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 237 GYCIEGTQRIL-VYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
C + R+ V EYVN G+L M + L E + AL YLHE
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLHER-- 172
Query: 296 PKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTRVMGT 341
+++RD+K N+L+D K++D+G+ K G T+ GT
Sbjct: 173 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGT 216
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N+LID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVLIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + IG G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY+ G++ LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ K++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + IG G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY+ G++ LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ K++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 167 RDLQSATNRFSKDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNN------PGQADKDFRV 219
+D ++ + ++G GG+G V+ G +L + VA+K + N P +
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 220 EVEAIGHVR----HKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEA 275
EV + V H ++RLL + +LV E Q L + ++G L E
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPA---QDLFDYITEKGPLG-EG 139
Query: 276 RMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILID-ENFDAKISDFGLAKLL 327
+ G + +A + VVHRDIK NILID AK+ DFG LL
Sbjct: 140 PSRCFFG--QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL 190
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 178 KDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNLVRL 235
+++++G+G + V L+ AVK + PG EVE + + H+N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
+ + E + LV+E + G++ + R + EA + ++ A AL +LH
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHK---RRHFNELEASV-VVQDVASALDFLHNK-- 130
Query: 296 PKVVHRDIKSSNILID---ENFDAKISDFGL 323
+ HRD+K NIL + + KI DFGL
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFGL 160
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 181 IIGDGGYGVVYRGQLMNGTA--VAVKKLLNNPGQADKDFR---VEVEAIGHVRHKNLVRL 235
++G G +G V GT A+K L + D D VE + + +
Sbjct: 26 VLGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 236 LGYCIEGTQRI-LVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKILLGTAKALAYLHE 292
L C + R+ V EYVN G+L ++ G + + + A + I L +LH+
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GLFFLHK 138
Query: 293 AIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+++RD+K N+++D KI+DFG+ K
Sbjct: 139 R---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 214 DKDFRVEVEAIGHVRHKNLVRLLG--YCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYL 271
+ + + E++ + +RHKN+++L+ Y E + +V EY G Q + + ++ +
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLDSVPEKRFP 107
Query: 272 TWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGK 331
+A L YLH +VH+DIK N+L+ KIS G+A+ L
Sbjct: 108 VCQAH-GYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 332 SHITTRV 338
+ T R
Sbjct: 164 ADDTCRT 170
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 159
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 187
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 159
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 187
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 109 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 158
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 159 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 186
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 160
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 188
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLL 327
KI + KAL +LH + V+HRD+K SN+LI+ K DFG++ L
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYL 187
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 247 LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSS 306
LV+E+VNN + +Q L + D ++ R + KAL Y H ++HRD+K
Sbjct: 116 LVFEHVNNTDFKQ-LYQTLTD-----YDIRF-YMYEILKALDYCHSM---GIMHRDVKPH 165
Query: 307 NILID-ENFDAKISDFGLAKLLGAGKSH 333
N++ID E+ ++ D+GLA+ G+ +
Sbjct: 166 NVMIDHEHRKLRLIDWGLAEFYHPGQEY 193
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 139
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 182
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 139
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 182
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 139
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 182
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 140
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 141 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 183
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 17 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 69
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 70 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 129
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LIDE +++DFG AK
Sbjct: 130 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 139
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 182
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 160
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 161 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 203
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 158 LGWGHWFT--LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK 215
L W FT ++++Q F +IG G +G V ++ N + K+LN +
Sbjct: 56 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 115
Query: 216 D----FRVEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNL-------EQWLRG 263
FR E + + + + L Y + + LV +Y G+L E L
Sbjct: 116 AETACFREERDVLVN-GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE 174
Query: 264 DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
DM R Y+ M + + + L Y VHRDIK N+L+D N +++DFG
Sbjct: 175 DMA-RFYI---GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFG 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 158 LGWGHWFT--LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNNPGQADK 215
L W FT ++++Q F +IG G +G V ++ N + K+LN +
Sbjct: 72 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 131
Query: 216 D----FRVEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNL-------EQWLRG 263
FR E + + + + L Y + + LV +Y G+L E L
Sbjct: 132 AETACFREERDVLVN-GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE 190
Query: 264 DMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
DM R Y+ M + + + L Y VHRDIK N+L+D N +++DFG
Sbjct: 191 DMA-RFYI---GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFG 236
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 139
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 182
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 139
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 182
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 140
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 141 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 183
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 13/106 (12%)
Query: 231 NLVRLLGYCIEGTQRI--LVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALA 288
N+V+LL + + L++EYVNN + + L + D ++ R I KAL
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIY-ELLKALD 141
Query: 289 YLHEAIEPKVVHRDIKSSNILIDENF-DAKISDFGLAKLLGAGKSH 333
Y H ++HRD+K N++ID ++ D+GLA+ GK +
Sbjct: 142 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 184
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKEIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N++ID+ K++DFGLAK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 79
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 138
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 139 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNN---PGQADKDFRVEVE 222
+RDL+ + +IG G +G V + + V KLL+ ++D F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKIL 280
I + V L Y + + + +V EY+ G+L + D+ ++ + A + +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
L ++ + +HRD+K N+L+D++ K++DFG
Sbjct: 186 LDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNN---PGQADKDFRVEVE 222
+RDL+ + +IG G +G V + + V KLL+ ++D F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKIL 280
I + V L Y + + + +V EY+ G+L + D+ ++ + A + +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
L ++ + +HRD+K N+L+D++ K++DFG
Sbjct: 186 LDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 61 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 119
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 120 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 172
Query: 327 LG 328
LG
Sbjct: 173 LG 174
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 51 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 103
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 163
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 164 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 166 LRDLQSATNRFSKDNIIGDGGYGVVYRGQLMNGTAVAVKKLLNN---PGQADKDFRVEVE 222
+RDL+ + +IG G +G V + + V KLL+ ++D F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 223 AIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRG-DMCDRGYLTWEARMKIL 280
I + V L Y + + + +V EY+ G+L + D+ ++ + A + +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 180
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFG 322
L ++ + +HRD+K N+L+D++ K++DFG
Sbjct: 181 LDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 55 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 114 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Query: 327 LG 328
LG
Sbjct: 167 LG 168
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 54 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 112
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 113 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 165
Query: 327 LG 328
LG
Sbjct: 166 LG 167
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 169 LQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKD---FRVEVEAI 224
Q ++R+ + +G G YG V+ + G A+K + + + EV +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 225 GHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNL--EQWLRGDMCDRGYLTWEARMK-ILL 281
+ H N+++L + + LV E G L E LR + + MK +L
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAVIMKQVLS 132
Query: 282 GTAKALAYLHEAIEPKVVHRDIKSSNILID-ENFDA--KISDFGLAKLLGAG 330
GT YLH+ +VHRD+K N+L++ ++ DA KI DFGL+ G
Sbjct: 133 GTT----YLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 177
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 94
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL- 153
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 154 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 55 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 114 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Query: 327 LG 328
LG
Sbjct: 167 LG 168
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVK--KLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
IG+G +GV++ G L+N VA+K ++ Q ++R G N+ +
Sbjct: 18 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYY---F 74
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
EG +LV + + +LE L D+C R + + + + + LA + E +
Sbjct: 75 GQEGLHNVLVIDLLG-PSLEDLL--DLCGRKF----SVKTVAMAAKQMLARVQSIHEKSL 127
Query: 299 VHRDIKSSNILI----DENFDA-KISDFGLAKLL--GAGKSHITTR 337
V+RDIK N LI +N + + DFG+ K K HI R
Sbjct: 128 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYR 173
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EYV G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 55 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE 113
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAKL 326
++LL A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K+
Sbjct: 114 ATCKLYFYQMLL----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Query: 327 LG 328
LG
Sbjct: 167 LG 168
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 182 IGDGGYGVVYRG-QLMNGTAVAVK--KLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGY 238
IG+G +GV++ G L+N VA+K ++ Q ++R G N+ +
Sbjct: 17 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYY---F 73
Query: 239 CIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIEPKV 298
EG +LV + + +LE L D+C R + + + + + LA + E +
Sbjct: 74 GQEGLHNVLVIDLLG-PSLEDLL--DLCGRKF----SVKTVAMAAKQMLARVQSIHEKSL 126
Query: 299 VHRDIKSSNILI----DENFDA-KISDFGLAKLL--GAGKSHITTR 337
V+RDIK N LI +N + + DFG+ K K HI R
Sbjct: 127 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYR 172
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 31 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 83
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 143
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 144 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 51 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 103
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 163
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 164 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 180 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK- 237
Query: 270 YLTWEARMKILL-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAK 325
EA K+ A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K
Sbjct: 238 ----EATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
Query: 326 LLG 328
+LG
Sbjct: 291 ILG 293
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 212 QADKDFRVE--VEAIGHVRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRG 269
+AD VE +E + + H ++++ + + +V E + G L + G+ +
Sbjct: 194 EADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK- 251
Query: 270 YLTWEARMKILL-GTAKALAYLHEAIEPKVVHRDIKSSNILI---DENFDAKISDFGLAK 325
EA K+ A+ YLHE ++HRD+K N+L+ +E+ KI+DFG +K
Sbjct: 252 ----EATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
Query: 326 LLG 328
+LG
Sbjct: 305 ILG 307
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 182 IGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKDFRVEVEAIGHVRHKNLVRLLGYC- 239
+ + G +++G+ N V V K+ + + +DF E + H N++ +LG C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 240 -IEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEAR-MKILLGTAKALAYLHEAIEPK 297
L+ + G+L L ++ +++ +K L A+ A+LH +EP
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEGT---NFVVDQSQAVKFALDXARGXAFLH-TLEPL 133
Query: 298 VVHRDIKSSNILIDENFDAKIS 319
+ + S ++ IDE+ A+IS
Sbjct: 134 IPRHALNSRSVXIDEDXTARIS 155
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKQIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N++ID+ K++DFG AK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 162 HWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM---NGTAVAVKKLLNNPGQADKDFR 218
W L N F + ++G GG+G V Q+ A + + +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
+ + I + V L Y E + LV +N G+L+ + M G+ EAR
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP--EARA 288
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+ A+ L + ++V+RD+K NIL+D++ +ISD GLA + G++ I R
Sbjct: 289 --VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR 345
Query: 338 VMGTFG 343
V GT G
Sbjct: 346 V-GTVG 350
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 173 TNRFSKDNIIGDGGYGVVY--RGQLMNGT--AVAVKKLLNNPGQADKDFRVEVEAIGHVR 228
+N F ++ IG+G + VY QL G +A+K L+ P E++ +
Sbjct: 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLI--PTSHPIRIAAELQCLTVAG 77
Query: 229 HKNLVRLLGYCIEGTQRILV-YEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKAL 287
++ V + YC +++ Y+ + + L L+++ + +L KAL
Sbjct: 78 GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-------LSFQEVREYMLNLFKAL 130
Query: 288 AYLHEAIEPKVVHRDIKSSNILIDENFDA-KISDFGLAK 325
+H+ +VHRD+K SN L + + DFGLA+
Sbjct: 131 KRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 25/164 (15%)
Query: 176 FSKDNIIGDGGYGVVYRGQLM-NGTAVAVKKLLNNPGQADKDFRVEVEAIGHV----RHK 230
F + + +G G YG V++ + +G AVK+ ++ P + KD ++ +G +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMS-PFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 231 NLVRLLGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMK------ILLGTA 284
VRL EG L E +L+Q C+ W A + L T
Sbjct: 118 CCVRLEQAWEEGGILYLQTELCGP-SLQQ-----HCE----AWGASLPEAQVWGYLRDTL 167
Query: 285 KALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLG 328
ALA+LH +VH D+K +NI + K+ DFGL LG
Sbjct: 168 LALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 178 KDNIIGDGGYGVVYRG-QLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGHVR-HKNLVRL 235
+++++G+G + V L+ AVK + PG EVE + + H+N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 236 LGYCIEGTQRILVYEYVNNGNLEQWLRGDMCDRGYLTWEARMKILLGTAKALAYLHEAIE 295
+ + E + LV+E + G++ + R + EA + ++ A AL +LH
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHK---RRHFNELEASV-VVQDVASALDFLHNK-- 130
Query: 296 PKVVHRDIKSSNILID---ENFDAKISDFGL 323
+ HRD+K NIL + + KI DF L
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFDL 160
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 29/165 (17%)
Query: 174 NRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEVEAIGH------ 226
++F + +G G +G V+ + G A+K L DK V+++ I H
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL-------DKQKVVKLKEIEHTLNEKR 93
Query: 227 ----VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRGYLTWEARMKIL 280
V LV+L + + +V EY G + LR G + + A++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL- 152
Query: 281 LGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
YLH +++RD+K N++ID+ +++DFGLAK
Sbjct: 153 -----TFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 82
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 143 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 268 RGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ +LT E + AK + +L K +HRD+ + NIL+ E KI DFGLA+
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 163 WFTLRDLQSATNRFSKDNIIGDGGYG-VVYRGQLMNGTAVAVKKLLNNPGQADKDFRVEV 221
W T + ++F + +G G +G V+ +G A+K L DK V++
Sbjct: 25 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-------DKQKVVKL 77
Query: 222 EAIGH----------VRHKNLVRLLGYCIEGTQRILVYEYVNNGNLEQWLR--GDMCDRG 269
+ I H V LV+L + + +V EYV G + LR G +
Sbjct: 78 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 137
Query: 270 YLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAK 325
+ A++ + YLH +++RD+K N+LID+ +++DFG AK
Sbjct: 138 ARFYAAQIVL------TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 162 HWFTLRDLQSATNRFSKDNIIGDGGYGVVYRGQLM---NGTAVAVKKLLNNPGQADKDFR 218
W L N F + ++G GG+G V Q+ A + + +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 219 VEVEAIGHVRHKNLVRLLGYCIEGTQRI-LVYEYVNNGNLEQWLRGDMCDRGYLTWEARM 277
+ + I + V L Y E + LV +N G+L+ + M G+ EAR
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFP--EARA 288
Query: 278 KILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDENFDAKISDFGLAKLLGAGKSHITTR 337
+ A+ L + ++V+RD+K NIL+D++ +ISD GLA + G++ I R
Sbjct: 289 --VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR 345
Query: 338 VMGTFG 343
V GT G
Sbjct: 346 V-GTVG 350
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,885,254
Number of Sequences: 62578
Number of extensions: 485970
Number of successful extensions: 2953
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 183
Number of HSP's that attempted gapping in prelim test: 1155
Number of HSP's gapped (non-prelim): 1129
length of query: 343
length of database: 14,973,337
effective HSP length: 100
effective length of query: 243
effective length of database: 8,715,537
effective search space: 2117875491
effective search space used: 2117875491
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)