Query 019290
Match_columns 343
No_of_seqs 135 out of 1557
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 13:48:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019290.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019290hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 1.3E-31 4.6E-36 241.1 27.7 305 22-343 5-311 (322)
2 3sre_A PON1, serum paraoxonase 99.9 1.4E-24 4.7E-29 195.7 28.1 283 29-342 43-354 (355)
3 3e5z_A Putative gluconolactona 99.9 1.1E-23 3.9E-28 186.6 31.7 259 25-343 19-284 (296)
4 3dr2_A Exported gluconolactona 99.9 4.4E-24 1.5E-28 190.4 27.3 249 33-342 43-303 (305)
5 3g4e_A Regucalcin; six bladed 99.9 5.3E-24 1.8E-28 189.2 25.3 244 33-335 11-263 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 1.7E-22 5.9E-27 179.9 28.1 262 33-343 16-297 (314)
7 2p4o_A Hypothetical protein; p 99.9 2.7E-20 9.2E-25 166.0 30.3 239 23-335 22-279 (306)
8 2ghs_A AGR_C_1268P; regucalcin 99.9 8.5E-21 2.9E-25 170.8 26.0 245 27-336 41-294 (326)
9 2qc5_A Streptogramin B lactona 99.9 1.8E-19 6E-24 158.9 31.3 241 26-343 10-258 (300)
10 2dg1_A DRP35, lactonase; beta 99.9 4.8E-20 1.6E-24 165.7 27.9 251 34-342 44-313 (333)
11 1q7f_A NHL, brain tumor CG1071 99.9 2.5E-19 8.5E-24 157.6 31.8 242 33-342 28-277 (286)
12 1rwi_B Serine/threonine-protei 99.9 8.5E-20 2.9E-24 158.9 26.8 233 36-343 25-262 (270)
13 3hrp_A Uncharacterized protein 99.9 3.7E-19 1.3E-23 165.0 30.1 241 33-342 129-407 (409)
14 2z2n_A Virginiamycin B lyase; 99.9 1.1E-18 3.7E-23 153.7 31.7 241 26-343 5-253 (299)
15 2qc5_A Streptogramin B lactona 99.9 8.5E-19 2.9E-23 154.5 30.5 238 28-343 54-298 (300)
16 4hw6_A Hypothetical protein, I 99.9 4E-19 1.4E-23 165.8 28.4 242 33-343 137-431 (433)
17 2z2n_A Virginiamycin B lyase; 99.8 2.9E-18 9.8E-23 151.0 30.1 239 27-343 48-293 (299)
18 3tc9_A Hypothetical hydrolase; 99.8 2.2E-18 7.4E-23 160.8 29.0 243 33-343 135-428 (430)
19 2qe8_A Uncharacterized protein 99.8 4.7E-18 1.6E-22 153.9 28.4 244 35-337 17-313 (343)
20 3v64_C Agrin; beta propeller, 99.8 3.1E-18 1E-22 155.5 25.5 209 32-308 70-283 (349)
21 3fvz_A Peptidyl-glycine alpha- 99.8 9.2E-18 3.2E-22 151.0 27.6 245 33-342 22-319 (329)
22 3v64_C Agrin; beta propeller, 99.8 2.6E-17 8.9E-22 149.4 29.7 231 38-342 37-272 (349)
23 3v65_B Low-density lipoprotein 99.8 3.8E-18 1.3E-22 157.0 24.2 209 32-308 113-326 (386)
24 1npe_A Nidogen, entactin; glyc 99.8 1.8E-17 6.1E-22 144.6 27.2 207 35-308 36-246 (267)
25 1ijq_A LDL receptor, low-densi 99.8 1.4E-17 4.8E-22 149.1 25.8 192 31-266 26-227 (316)
26 3v65_B Low-density lipoprotein 99.8 8E-17 2.7E-21 148.2 29.9 230 39-342 81-315 (386)
27 1ijq_A LDL receptor, low-densi 99.8 1.1E-16 3.7E-21 143.3 29.3 224 49-343 4-236 (316)
28 4a0p_A LRP6, LRP-6, low-densit 99.8 3.6E-17 1.2E-21 159.1 27.7 196 27-266 29-226 (628)
29 1npe_A Nidogen, entactin; glyc 99.8 9.3E-17 3.2E-21 140.0 27.5 229 47-343 2-236 (267)
30 3sov_A LRP-6, low-density lipo 99.8 2.1E-17 7.1E-22 147.9 22.0 208 31-307 31-245 (318)
31 4a2l_A BT_4663, two-component 99.8 1.4E-16 4.8E-21 159.8 29.6 239 36-343 358-612 (795)
32 3p5b_L Low density lipoprotein 99.8 2.8E-16 9.6E-21 145.2 28.3 219 54-342 90-317 (400)
33 3v9f_A Two-component system se 99.8 9.2E-17 3.1E-21 160.9 26.7 234 36-343 364-609 (781)
34 3dsm_A Uncharacterized protein 99.8 1.2E-16 4.1E-21 143.7 24.5 224 25-309 76-310 (328)
35 3vgz_A Uncharacterized protein 99.8 5.2E-16 1.8E-20 139.7 28.7 256 17-343 25-301 (353)
36 3kya_A Putative phosphatase; s 99.8 8.6E-16 2.9E-20 143.7 30.2 247 33-342 137-472 (496)
37 4a2l_A BT_4663, two-component 99.8 5.1E-16 1.8E-20 155.8 29.3 235 36-343 407-657 (795)
38 1rwi_B Serine/threonine-protei 99.8 3.2E-16 1.1E-20 136.1 24.1 188 31-266 63-253 (270)
39 3p5b_L Low density lipoprotein 99.8 4E-16 1.4E-20 144.1 25.9 191 32-266 109-309 (400)
40 3v9f_A Two-component system se 99.8 4.5E-16 1.5E-20 155.9 28.2 240 36-342 314-565 (781)
41 3s94_A LRP-6, low-density lipo 99.7 8E-16 2.8E-20 149.5 27.9 193 30-266 344-540 (619)
42 3m0c_C LDL receptor, low-densi 99.7 1.6E-15 5.3E-20 150.6 28.2 219 54-342 402-629 (791)
43 3s94_A LRP-6, low-density lipo 99.7 6.3E-16 2.1E-20 150.2 24.8 194 29-266 34-232 (619)
44 2ism_A Putative oxidoreductase 99.7 1.4E-15 4.9E-20 138.0 25.4 258 33-341 29-351 (352)
45 3sov_A LRP-6, low-density lipo 99.7 2.4E-15 8.1E-20 134.5 25.4 195 97-343 36-236 (318)
46 4a0p_A LRP6, LRP-6, low-densit 99.7 8E-15 2.7E-19 142.6 29.7 218 54-342 13-234 (628)
47 3m0c_C LDL receptor, low-densi 99.7 4.3E-15 1.5E-19 147.5 25.8 191 32-266 421-621 (791)
48 3fvz_A Peptidyl-glycine alpha- 99.7 1.6E-15 5.6E-20 136.2 20.4 203 32-266 88-311 (329)
49 3hrp_A Uncharacterized protein 99.7 1.1E-14 3.7E-19 134.9 25.1 192 35-266 172-399 (409)
50 1n7d_A LDL receptor, low-densi 99.7 5.7E-16 1.9E-20 152.7 16.4 209 32-308 403-622 (699)
51 1q7f_A NHL, brain tumor CG1071 99.7 2.3E-14 7.9E-19 125.6 24.7 201 94-343 28-236 (286)
52 3a9g_A Putative uncharacterize 99.7 1.6E-14 5.5E-19 131.1 23.9 263 33-342 27-349 (354)
53 1n7d_A LDL receptor, low-densi 99.7 2.5E-15 8.5E-20 148.2 19.5 220 54-343 384-612 (699)
54 3dsm_A Uncharacterized protein 99.6 7.1E-14 2.4E-18 125.6 25.4 233 36-343 45-300 (328)
55 3ott_A Two-component system se 99.6 7.6E-14 2.6E-18 139.3 26.6 237 37-343 326-584 (758)
56 3hfq_A Uncharacterized protein 99.6 1.3E-13 4.6E-18 124.1 25.6 248 34-341 39-313 (347)
57 3e5z_A Putative gluconolactona 99.6 1.3E-13 4.4E-18 121.6 23.8 194 36-304 70-289 (296)
58 3ott_A Two-component system se 99.6 1.2E-13 4E-18 137.9 25.2 233 36-343 374-624 (758)
59 3u4y_A Uncharacterized protein 99.6 7.7E-13 2.6E-17 118.0 27.5 248 25-342 32-301 (331)
60 3vgz_A Uncharacterized protein 99.6 6.5E-12 2.2E-16 112.7 33.4 233 36-334 90-334 (353)
61 2fp8_A Strictosidine synthase; 99.6 6.9E-14 2.4E-18 125.2 19.8 185 36-266 81-302 (322)
62 2p9w_A MAL S 1 allergenic prot 99.6 3.3E-13 1.1E-17 118.9 21.7 206 27-266 4-254 (334)
63 3hxj_A Pyrrolo-quinoline quino 99.6 1.5E-12 5.2E-17 116.0 26.4 210 40-335 103-315 (330)
64 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 4E-13 1.4E-17 119.0 22.3 186 35-266 71-288 (314)
65 2dg1_A DRP35, lactonase; beta 99.6 1.1E-13 3.9E-18 123.8 17.7 197 97-343 46-261 (333)
66 1l0q_A Surface layer protein; 99.6 1.4E-11 4.9E-16 112.4 31.6 241 26-342 25-272 (391)
67 3u4y_A Uncharacterized protein 99.6 5E-12 1.7E-16 112.7 27.4 235 40-343 3-250 (331)
68 3tc9_A Hypothetical hydrolase; 99.5 5.2E-13 1.8E-17 124.4 21.4 203 94-343 135-369 (430)
69 2g8s_A Glucose/sorbosone dehyd 99.5 1.3E-12 4.5E-17 118.5 22.9 268 33-343 16-352 (353)
70 3kya_A Putative phosphatase; s 99.5 5.9E-13 2E-17 124.6 20.8 213 94-343 137-408 (496)
71 4hw6_A Hypothetical protein, I 99.5 1.1E-12 3.9E-17 122.1 22.6 203 94-343 137-372 (433)
72 3g4e_A Regucalcin; six bladed 99.5 2.8E-12 9.7E-17 113.3 22.7 190 97-343 14-227 (297)
73 3scy_A Hypothetical bacterial 99.5 1.8E-11 6.3E-16 110.7 28.5 247 33-341 48-333 (361)
74 2qe8_A Uncharacterized protein 99.5 1.7E-12 5.7E-17 117.3 20.4 195 33-266 65-310 (343)
75 3dr2_A Exported gluconolactona 99.5 1.4E-12 4.8E-17 115.7 19.4 186 36-266 87-297 (305)
76 3das_A Putative oxidoreductase 99.5 2.4E-11 8.1E-16 109.0 27.0 261 33-342 30-345 (347)
77 3hxj_A Pyrrolo-quinoline quino 99.5 7E-12 2.4E-16 111.7 21.7 173 107-342 107-281 (330)
78 3qqz_A Putative uncharacterize 99.5 3.9E-11 1.3E-15 103.0 25.3 201 29-266 20-243 (255)
79 1ri6_A Putative isomerase YBHE 99.5 8E-11 2.7E-15 104.9 28.6 241 36-341 39-304 (343)
80 2iwa_A Glutamine cyclotransfer 99.5 1.2E-11 4E-16 106.8 21.6 196 97-342 22-234 (266)
81 3hfq_A Uncharacterized protein 99.5 5.1E-11 1.7E-15 107.1 26.9 204 35-266 86-306 (347)
82 2iwa_A Glutamine cyclotransfer 99.4 6.9E-11 2.4E-15 102.0 24.8 197 22-266 8-226 (266)
83 1jof_A Carboxy-CIS,CIS-muconat 99.4 6.3E-11 2.2E-15 107.7 26.0 250 31-342 36-338 (365)
84 3bws_A Protein LP49; two-domai 99.4 2.2E-10 7.6E-15 105.9 29.3 249 37-342 172-429 (433)
85 3bws_A Protein LP49; two-domai 99.4 1.1E-10 3.8E-15 107.9 25.5 232 36-336 124-367 (433)
86 1l0q_A Surface layer protein; 99.4 3.1E-10 1.1E-14 103.4 27.6 218 49-342 5-230 (391)
87 1nir_A Nitrite reductase; hemo 99.4 2.4E-10 8.2E-15 109.6 27.3 249 26-342 172-455 (543)
88 1nir_A Nitrite reductase; hemo 99.4 6.4E-10 2.2E-14 106.6 29.2 234 41-342 144-399 (543)
89 3no2_A Uncharacterized protein 99.4 8.6E-10 2.9E-14 96.4 27.5 217 45-333 4-231 (276)
90 2p4o_A Hypothetical protein; p 99.4 1.2E-10 4.2E-15 103.2 21.8 187 36-266 73-278 (306)
91 1pby_B Quinohemoprotein amine 99.4 7.2E-10 2.5E-14 98.4 26.4 244 24-342 22-307 (337)
92 3no2_A Uncharacterized protein 99.3 2.2E-09 7.7E-14 93.7 28.4 235 26-321 28-271 (276)
93 2ghs_A AGR_C_1268P; regucalcin 99.3 1.1E-10 3.8E-15 104.5 20.3 183 36-266 91-292 (326)
94 1ri6_A Putative isomerase YBHE 99.3 1.3E-09 4.4E-14 97.0 26.7 193 36-266 85-297 (343)
95 1gxr_A ESG1, transducin-like e 99.3 1.2E-08 4.2E-13 90.2 30.2 234 36-342 99-334 (337)
96 2ism_A Putative oxidoreductase 99.3 5.7E-10 2E-14 101.0 21.7 216 95-342 30-294 (352)
97 1jmx_B Amine dehydrogenase; ox 99.3 1.4E-09 4.6E-14 97.2 23.9 238 24-310 32-335 (349)
98 3nol_A Glutamine cyclotransfer 99.3 1.4E-09 4.8E-14 92.9 22.2 190 99-342 46-253 (262)
99 3qqz_A Putative uncharacterize 99.3 1E-08 3.5E-13 87.9 27.6 199 96-343 27-251 (255)
100 3nok_A Glutaminyl cyclase; bet 99.3 7.4E-10 2.5E-14 94.6 19.8 192 98-342 57-263 (268)
101 3a9g_A Putative uncharacterize 99.2 1.7E-09 5.8E-14 97.9 22.7 158 94-266 27-217 (354)
102 1cru_A Protein (soluble quinop 99.2 4E-09 1.4E-13 98.6 25.7 177 32-222 24-248 (454)
103 3mbr_X Glutamine cyclotransfer 99.2 9.8E-09 3.3E-13 86.9 25.3 192 97-342 22-232 (243)
104 1qks_A Cytochrome CD1 nitrite 99.2 8.3E-09 2.8E-13 99.1 27.7 251 23-342 187-474 (567)
105 3q6k_A 43.2 kDa salivary prote 99.2 2.4E-08 8.1E-13 90.2 27.7 242 32-334 23-343 (381)
106 2p9w_A MAL S 1 allergenic prot 99.2 2.9E-09 9.9E-14 93.9 20.8 162 94-266 11-204 (334)
107 3nol_A Glutamine cyclotransfer 99.2 3.8E-09 1.3E-13 90.2 20.7 165 23-231 75-255 (262)
108 3scy_A Hypothetical bacterial 99.2 7.3E-09 2.5E-13 93.5 23.9 204 35-266 100-326 (361)
109 3c75_H MADH, methylamine dehyd 99.2 5.2E-09 1.8E-13 96.6 22.6 240 23-307 109-409 (426)
110 3mbr_X Glutamine cyclotransfer 99.2 7.2E-09 2.5E-13 87.7 21.1 165 23-231 53-234 (243)
111 1pby_B Quinohemoprotein amine 99.2 1.3E-08 4.3E-13 90.3 24.0 217 36-311 83-321 (337)
112 2hqs_A Protein TOLB; TOLB, PAL 99.2 2.4E-08 8.4E-13 92.3 26.4 207 36-310 180-396 (415)
113 2ymu_A WD-40 repeat protein; u 99.2 5.6E-08 1.9E-12 93.1 29.9 230 36-341 346-576 (577)
114 1gxr_A ESG1, transducin-like e 99.1 9.9E-08 3.4E-12 84.3 28.7 190 36-266 53-244 (337)
115 4ery_A WD repeat-containing pr 99.1 1.8E-07 6.3E-12 82.3 30.2 238 36-342 25-265 (312)
116 2mad_H Methylamine dehydrogena 99.1 2E-07 6.9E-12 84.9 30.7 254 25-343 59-348 (373)
117 1jmx_B Amine dehydrogenase; ox 99.1 1.2E-08 4.2E-13 90.9 22.3 165 39-232 4-175 (349)
118 3nok_A Glutaminyl cyclase; bet 99.1 1.1E-08 3.8E-13 87.4 20.2 163 23-230 85-264 (268)
119 3das_A Putative oxidoreductase 99.1 3.8E-08 1.3E-12 88.1 24.0 208 93-342 29-289 (347)
120 1qks_A Cytochrome CD1 nitrite 99.1 6.3E-08 2.2E-12 93.0 26.8 238 37-342 156-418 (567)
121 1k8k_C P40, ARP2/3 complex 41 99.1 1.5E-07 5E-12 84.6 27.6 240 36-342 10-271 (372)
122 2ymu_A WD-40 repeat protein; u 99.1 1.6E-07 5.3E-12 90.0 29.4 201 36-308 305-505 (577)
123 3c75_H MADH, methylamine dehyd 99.1 3.5E-08 1.2E-12 91.1 23.3 258 44-343 82-400 (426)
124 1jof_A Carboxy-CIS,CIS-muconat 99.1 1.4E-07 4.8E-12 85.4 27.2 187 49-266 5-213 (365)
125 3ow8_A WD repeat-containing pr 99.1 4.5E-07 1.6E-11 80.6 29.8 234 36-342 82-318 (321)
126 2hqs_A Protein TOLB; TOLB, PAL 99.0 1.8E-07 6.1E-12 86.5 27.0 164 56-264 159-328 (415)
127 3sjl_D Methylamine dehydrogena 99.0 2E-07 6.7E-12 84.7 26.4 257 23-343 69-361 (386)
128 2g8s_A Glucose/sorbosone dehyd 99.0 2.2E-08 7.7E-13 90.5 20.1 213 36-265 67-341 (353)
129 2ece_A 462AA long hypothetical 99.0 1.5E-07 5.3E-12 86.3 24.9 229 23-266 58-341 (462)
130 2ojh_A Uncharacterized protein 99.0 2.2E-07 7.5E-12 80.2 23.8 183 36-263 43-233 (297)
131 3s25_A Hypothetical 7-bladed b 99.0 1.8E-07 6.3E-12 82.5 23.4 197 56-342 88-290 (302)
132 2mad_H Methylamine dehydrogena 99.0 3.8E-07 1.3E-11 83.0 26.2 214 23-306 107-356 (373)
133 2oiz_A Aromatic amine dehydrog 99.0 4.4E-07 1.5E-11 82.2 26.4 255 25-343 43-332 (361)
134 1got_B GT-beta; complex (GTP-b 99.0 9.9E-07 3.4E-11 78.9 27.8 234 36-341 99-339 (340)
135 1got_B GT-beta; complex (GTP-b 99.0 1.5E-06 5.2E-11 77.7 29.0 187 36-266 57-246 (340)
136 3zwl_B Eukaryotic translation 99.0 1.8E-06 6.1E-11 77.1 29.2 191 36-266 34-238 (369)
137 4g56_B MGC81050 protein; prote 99.0 7.3E-08 2.5E-12 87.1 20.1 194 37-265 45-246 (357)
138 4gqb_B Methylosome protein 50; 99.0 9.3E-07 3.2E-11 79.5 27.2 237 37-341 85-327 (344)
139 2pm9_A Protein WEB1, protein t 99.0 4.2E-07 1.5E-11 83.0 25.4 242 36-342 69-334 (416)
140 3zwl_B Eukaryotic translation 99.0 6.8E-07 2.3E-11 79.8 26.2 250 36-342 76-343 (369)
141 3sjl_D Methylamine dehydrogena 98.9 3.3E-07 1.1E-11 83.2 23.8 218 23-310 119-373 (386)
142 4e54_B DNA damage-binding prot 98.9 1.9E-07 6.7E-12 86.5 22.8 193 37-266 122-316 (435)
143 3sre_A PON1, serum paraoxonase 98.9 5.6E-08 1.9E-12 87.4 18.1 187 97-333 51-285 (355)
144 1r5m_A SIR4-interacting protei 98.9 1.7E-06 5.7E-11 78.9 28.4 235 36-342 110-358 (425)
145 1mda_H Methylamine dehydrogena 98.9 4.6E-08 1.6E-12 88.7 17.3 239 22-310 55-356 (368)
146 2ojh_A Uncharacterized protein 98.9 3.8E-07 1.3E-11 78.7 22.5 168 54-264 20-191 (297)
147 4aez_A CDC20, WD repeat-contai 98.9 2.9E-06 9.9E-11 77.6 29.2 183 36-265 136-322 (401)
148 4gqb_B Methylosome protein 50; 98.9 3.1E-07 1E-11 82.7 22.2 188 36-265 129-319 (344)
149 2ecf_A Dipeptidyl peptidase IV 98.9 2.8E-07 9.7E-12 91.2 23.9 159 36-220 38-228 (741)
150 2ynn_A Coatomer subunit beta'; 98.9 3.8E-06 1.3E-10 73.8 28.8 156 36-232 15-172 (304)
151 2ece_A 462AA long hypothetical 98.9 7.3E-07 2.5E-11 81.9 24.2 201 33-264 136-399 (462)
152 2ecf_A Dipeptidyl peptidase IV 98.9 3.8E-07 1.3E-11 90.3 24.3 202 37-266 111-356 (741)
153 3ow8_A WD repeat-containing pr 98.9 2.1E-06 7.3E-11 76.2 26.9 186 36-266 124-310 (321)
154 1erj_A Transcriptional repress 98.9 5.9E-06 2E-10 75.4 30.4 235 37-341 126-385 (393)
155 1vyh_C Platelet-activating fac 98.9 3.6E-06 1.2E-10 77.4 28.3 153 37-232 111-265 (410)
156 4ery_A WD repeat-containing pr 98.9 9.2E-06 3.1E-10 71.3 29.9 155 36-232 67-223 (312)
157 3ei3_B DNA damage-binding prot 98.9 1.3E-06 4.3E-11 79.2 24.9 193 36-266 75-271 (383)
158 2z3z_A Dipeptidyl aminopeptida 98.9 1.3E-06 4.5E-11 85.9 26.8 255 35-342 82-388 (706)
159 2wg3_C Hedgehog-interacting pr 98.9 2.7E-07 9.2E-12 86.2 20.6 179 33-220 12-242 (463)
160 2oiz_A Aromatic amine dehydrog 98.8 3.1E-07 1.1E-11 83.2 20.0 225 23-259 91-360 (361)
161 3s25_A Hypothetical 7-bladed b 98.8 1.8E-06 6.1E-11 76.1 24.1 212 44-342 23-252 (302)
162 3vl1_A 26S proteasome regulato 98.8 2.8E-06 9.4E-11 77.7 26.6 153 37-232 59-212 (420)
163 1fwx_A Nitrous oxide reductase 98.8 5.4E-07 1.8E-11 85.5 21.4 199 45-266 100-350 (595)
164 3vl1_A 26S proteasome regulato 98.8 2.1E-06 7.1E-11 78.6 25.1 232 39-342 102-362 (420)
165 1r5m_A SIR4-interacting protei 98.8 9.2E-07 3.2E-11 80.6 22.6 199 36-266 151-350 (425)
166 3pe7_A Oligogalacturonate lyas 98.8 1.1E-06 3.7E-11 79.7 22.9 200 40-265 41-257 (388)
167 2z3z_A Dipeptidyl aminopeptida 98.8 3.5E-06 1.2E-10 82.9 28.0 190 37-264 183-418 (706)
168 3jrp_A Fusion protein of prote 98.8 3.9E-06 1.3E-10 75.2 26.0 193 36-266 13-229 (379)
169 3mkq_A Coatomer beta'-subunit; 98.8 6.2E-06 2.1E-10 82.2 29.9 186 36-266 15-206 (814)
170 4g56_B MGC81050 protein; prote 98.8 4.8E-07 1.6E-11 81.7 19.9 189 36-266 141-332 (357)
171 1vyh_C Platelet-activating fac 98.8 5.2E-06 1.8E-10 76.3 27.2 234 36-342 152-408 (410)
172 1pgu_A Actin interacting prote 98.8 4.3E-06 1.5E-10 80.3 27.7 242 36-342 20-280 (615)
173 1cru_A Protein (soluble quinop 98.8 1.3E-07 4.4E-12 88.4 16.2 169 142-336 27-249 (454)
174 2xyi_A Probable histone-bindin 98.8 2.2E-06 7.5E-11 79.3 24.6 202 36-266 130-342 (430)
175 3q6k_A 43.2 kDa salivary prote 98.8 7.7E-06 2.6E-10 73.8 26.4 203 33-266 85-343 (381)
176 1k8k_C P40, ARP2/3 complex 41 98.8 4.1E-06 1.4E-10 75.0 24.9 191 36-265 54-263 (372)
177 3fm0_A Protein CIAO1; WDR39,SG 98.8 5.9E-06 2E-10 74.0 25.7 192 37-266 19-214 (345)
178 3q7m_A Lipoprotein YFGL, BAMB; 98.8 1.6E-05 5.5E-10 71.9 28.4 178 107-342 188-375 (376)
179 3dwl_C Actin-related protein 2 98.8 5.7E-07 2E-11 81.1 18.5 158 36-231 13-176 (377)
180 2aq5_A Coronin-1A; WD40 repeat 98.7 2.7E-06 9.1E-11 77.7 23.1 191 36-263 133-330 (402)
181 3pe7_A Oligogalacturonate lyas 98.7 1.5E-06 5.3E-11 78.6 20.9 181 39-259 85-302 (388)
182 3q7m_A Lipoprotein YFGL, BAMB; 98.7 4.7E-06 1.6E-10 75.4 24.1 217 46-342 103-334 (376)
183 3iz6_a 40S ribosomal protein R 98.7 4.4E-05 1.5E-09 69.2 30.7 262 36-342 68-372 (380)
184 2xzm_R RACK1; ribosome, transl 98.7 3.5E-05 1.2E-09 68.8 29.4 188 36-266 78-275 (343)
185 3frx_A Guanine nucleotide-bind 98.7 4.5E-05 1.5E-09 67.4 29.6 185 36-266 67-257 (319)
186 1sq9_A Antiviral protein SKI8; 98.7 9.1E-06 3.1E-10 73.6 25.6 245 36-342 64-392 (397)
187 2vdu_B TRNA (guanine-N(7)-)-me 98.7 1E-05 3.5E-10 75.1 26.4 159 36-232 104-271 (450)
188 3o4h_A Acylamino-acid-releasin 98.7 9.7E-07 3.3E-11 84.9 19.7 182 36-266 66-265 (582)
189 2pbi_B Guanine nucleotide-bind 98.7 3.9E-05 1.3E-09 68.9 29.2 240 36-341 108-353 (354)
190 1erj_A Transcriptional repress 98.7 3.9E-05 1.3E-09 69.9 29.5 203 36-266 66-276 (393)
191 3ei3_B DNA damage-binding prot 98.7 1.4E-05 4.9E-10 72.1 26.3 156 36-232 120-282 (383)
192 1sq9_A Antiviral protein SKI8; 98.7 9.8E-06 3.4E-10 73.4 25.0 239 36-342 18-319 (397)
193 1yfq_A Cell cycle arrest prote 98.7 3.6E-06 1.2E-10 74.5 21.5 185 36-266 13-214 (342)
194 2vdu_B TRNA (guanine-N(7)-)-me 98.7 7E-06 2.4E-10 76.2 23.9 145 97-266 104-260 (450)
195 3i2n_A WD repeat-containing pr 98.7 6.3E-06 2.2E-10 73.3 22.5 191 36-266 67-280 (357)
196 4a11_B DNA excision repair pro 98.7 3E-05 1E-09 70.1 27.2 169 36-232 45-218 (408)
197 3azo_A Aminopeptidase; POP fam 98.7 9.9E-06 3.4E-10 79.0 25.5 227 44-334 88-355 (662)
198 3dm0_A Maltose-binding peripla 98.7 3.5E-05 1.2E-09 75.7 29.5 188 36-266 432-622 (694)
199 3frx_A Guanine nucleotide-bind 98.7 3.5E-05 1.2E-09 68.1 26.7 190 36-266 19-216 (319)
200 2pbi_B Guanine nucleotide-bind 98.6 5.9E-05 2E-09 67.7 28.5 189 36-266 66-260 (354)
201 4h5i_A Guanine nucleotide-exch 98.6 6.2E-06 2.1E-10 74.6 22.1 189 37-266 136-332 (365)
202 4aez_A CDC20, WD repeat-contai 98.6 3.8E-05 1.3E-09 70.1 27.6 191 36-266 178-369 (401)
203 1pgu_A Actin interacting prote 98.6 1.7E-05 6E-10 76.0 26.5 235 37-342 67-325 (615)
204 3k26_A Polycomb protein EED; W 98.6 2.8E-05 9.6E-10 69.2 26.1 240 36-342 71-363 (366)
205 2aq5_A Coronin-1A; WD40 repeat 98.6 2.1E-05 7.2E-10 71.7 25.2 194 36-263 83-284 (402)
206 1nr0_A Actin interacting prote 98.6 2.8E-05 9.6E-10 75.3 26.5 188 36-266 20-210 (611)
207 2ynn_A Coatomer subunit beta'; 98.6 6.7E-05 2.3E-09 65.7 26.6 186 37-266 58-248 (304)
208 3odt_A Protein DOA1; ubiquitin 98.6 8.2E-05 2.8E-09 64.6 26.6 229 36-342 61-293 (313)
209 3mkq_A Coatomer beta'-subunit; 98.6 3.1E-05 1.1E-09 77.1 26.8 187 36-266 57-248 (814)
210 3o4h_A Acylamino-acid-releasin 98.6 3.2E-06 1.1E-10 81.3 18.5 179 37-265 24-213 (582)
211 3dw8_B Serine/threonine-protei 98.6 3.7E-05 1.3E-09 70.7 24.9 204 36-266 30-305 (447)
212 3sfz_A APAF-1, apoptotic pepti 98.5 9.8E-05 3.4E-09 77.3 30.8 190 36-266 617-818 (1249)
213 3sfz_A APAF-1, apoptotic pepti 98.5 3.6E-06 1.2E-10 88.1 19.9 233 36-342 1005-1246(1249)
214 4aow_A Guanine nucleotide-bind 98.5 0.0003 1E-08 61.8 29.8 187 36-266 88-276 (340)
215 3azo_A Aminopeptidase; POP fam 98.5 1.7E-05 5.7E-10 77.4 23.3 158 36-232 131-325 (662)
216 1fwx_A Nitrous oxide reductase 98.5 3.7E-06 1.3E-10 79.8 17.5 198 24-266 123-407 (595)
217 1nr0_A Actin interacting prote 98.5 0.00012 4.3E-09 70.7 29.0 82 36-129 192-273 (611)
218 3lrv_A PRE-mRNA-splicing facto 98.5 0.0002 6.9E-09 63.6 28.2 145 97-265 127-279 (343)
219 1xfd_A DIP, dipeptidyl aminope 98.5 7.3E-06 2.5E-10 80.7 20.3 145 36-219 18-191 (723)
220 3odt_A Protein DOA1; ubiquitin 98.5 7.7E-05 2.6E-09 64.8 24.9 229 36-342 20-252 (313)
221 2pm9_A Protein WEB1, protein t 98.5 9.1E-06 3.1E-10 74.0 19.5 189 36-266 14-235 (416)
222 1yfq_A Cell cycle arrest prote 98.5 2.1E-05 7E-10 69.6 21.3 226 36-334 58-313 (342)
223 1xfd_A DIP, dipeptidyl aminope 98.5 2.4E-05 8.3E-10 76.9 23.7 204 36-263 62-323 (723)
224 1mda_H Methylamine dehydrogena 98.5 7E-06 2.4E-10 74.3 17.5 213 23-257 106-367 (368)
225 3f3f_A Nucleoporin SEH1; struc 98.5 0.0001 3.5E-09 64.6 24.6 189 36-266 13-238 (351)
226 3jro_A Fusion protein of prote 98.5 2E-05 6.8E-10 78.4 21.6 192 36-266 11-227 (753)
227 2xzm_R RACK1; ribosome, transl 98.4 0.00022 7.5E-09 63.5 26.4 189 36-266 23-233 (343)
228 3dm0_A Maltose-binding peripla 98.4 0.00015 5.3E-09 71.1 27.2 190 36-266 384-581 (694)
229 3mmy_A MRNA export factor; mRN 98.4 0.00011 3.7E-09 65.3 23.8 99 36-159 41-146 (368)
230 2oaj_A Protein SNI1; WD40 repe 98.4 5.4E-05 1.8E-09 76.8 23.8 183 36-266 19-231 (902)
231 2xyi_A Probable histone-bindin 98.4 3.1E-05 1.1E-09 71.5 20.4 197 36-266 183-399 (430)
232 2pm7_B Protein transport prote 98.4 0.00018 6.3E-09 62.6 24.5 157 36-232 11-189 (297)
233 3i2n_A WD repeat-containing pr 98.4 5.9E-05 2E-09 66.9 21.4 185 36-266 20-232 (357)
234 1k32_A Tricorn protease; prote 98.4 6.6E-05 2.3E-09 77.4 24.6 151 37-220 340-491 (1045)
235 3c5m_A Oligogalacturonate lyas 98.4 1.3E-05 4.4E-10 72.5 17.2 185 39-264 85-300 (396)
236 3iz6_a 40S ribosomal protein R 98.4 0.00015 5.1E-09 65.6 24.3 192 37-266 160-364 (380)
237 3v7d_B Cell division control p 98.4 0.00046 1.6E-08 63.8 27.9 226 42-342 128-378 (464)
238 3dwl_C Actin-related protein 2 98.4 8.9E-06 3E-10 73.2 15.6 195 36-266 57-271 (377)
239 3k26_A Polycomb protein EED; W 98.4 0.00042 1.5E-08 61.4 26.6 160 36-232 20-192 (366)
240 3jrp_A Fusion protein of prote 98.4 4.6E-05 1.6E-09 68.1 20.3 194 36-266 57-276 (379)
241 3dw8_B Serine/threonine-protei 98.4 0.0004 1.4E-08 63.7 27.0 176 36-232 95-315 (447)
242 3c5m_A Oligogalacturonate lyas 98.4 2.7E-05 9.3E-10 70.3 18.8 202 37-265 38-257 (396)
243 3b7f_A Glycosyl hydrolase, BNR 98.4 0.00011 3.6E-09 67.1 22.8 221 42-332 19-297 (394)
244 4a5s_A Dipeptidyl peptidase 4 98.4 0.00029 9.9E-09 69.8 27.3 250 38-334 65-383 (740)
245 4aow_A Guanine nucleotide-bind 98.3 0.00062 2.1E-08 59.7 26.3 191 36-266 40-235 (340)
246 4h5i_A Guanine nucleotide-exch 98.3 3.8E-05 1.3E-09 69.4 18.6 159 36-232 178-343 (365)
247 4gga_A P55CDC, cell division c 98.3 0.0012 4.2E-08 60.4 28.8 234 36-341 149-391 (420)
248 3fm0_A Protein CIAO1; WDR39,SG 98.3 0.00016 5.4E-09 64.5 20.8 149 97-266 18-170 (345)
249 2gop_A Trilobed protease; beta 98.2 0.00032 1.1E-08 62.1 22.5 151 36-229 60-250 (347)
250 3v7d_B Cell division control p 98.2 0.0022 7.4E-08 59.2 29.0 243 36-338 205-456 (464)
251 3gre_A Serine/threonine-protei 98.2 0.00043 1.5E-08 63.5 23.7 240 36-342 65-356 (437)
252 1k32_A Tricorn protease; prote 98.2 4.6E-05 1.6E-09 78.5 18.6 181 36-265 297-491 (1045)
253 3amr_A 3-phytase; beta-propell 98.2 0.00046 1.6E-08 61.3 22.1 182 43-266 37-252 (355)
254 2hes_X YDR267CP; beta-propelle 98.2 0.0018 6E-08 57.3 26.3 159 36-232 16-184 (330)
255 3lrv_A PRE-mRNA-splicing facto 98.2 0.00071 2.4E-08 60.1 23.9 183 44-266 46-234 (343)
256 3bg1_A Protein SEC13 homolog; 98.2 0.00017 5.9E-09 63.4 19.6 161 36-232 15-198 (316)
257 2xdw_A Prolyl endopeptidase; a 98.2 0.00048 1.6E-08 67.8 24.7 192 37-266 127-355 (710)
258 1z68_A Fibroblast activation p 98.2 0.0001 3.5E-09 72.6 19.8 73 37-133 62-146 (719)
259 2j04_A TAU60, YPL007P, hypothe 98.2 0.0047 1.6E-07 58.7 30.4 219 36-308 17-261 (588)
260 3f3f_A Nucleoporin SEH1; struc 98.2 0.0012 4.2E-08 57.5 25.0 163 36-232 59-249 (351)
261 2ad6_A Methanol dehydrogenase 98.2 0.0016 5.4E-08 62.5 26.7 41 292-334 485-526 (571)
262 4a11_B DNA excision repair pro 98.2 0.00056 1.9E-08 61.6 22.4 154 36-232 101-276 (408)
263 1z68_A Fibroblast activation p 98.2 3.7E-05 1.3E-09 75.7 15.5 139 36-219 17-187 (719)
264 3vu4_A KMHSV2; beta-propeller 98.1 0.0026 8.8E-08 56.9 26.2 227 36-342 21-268 (355)
265 3amr_A 3-phytase; beta-propell 98.1 0.00051 1.8E-08 61.0 20.5 187 107-342 39-260 (355)
266 4a9v_A PHOX; hydrolase, beta-p 98.1 3.1E-05 1.1E-09 72.9 13.2 122 95-223 383-553 (592)
267 3mmy_A MRNA export factor; mRN 98.1 0.00044 1.5E-08 61.2 20.0 201 36-266 88-335 (368)
268 3jro_A Fusion protein of prote 98.1 0.00021 7.1E-09 71.0 19.5 194 36-266 55-274 (753)
269 4e54_B DNA damage-binding prot 98.1 0.00016 5.3E-09 66.8 17.4 143 97-264 121-269 (435)
270 3gre_A Serine/threonine-protei 98.1 0.0018 6E-08 59.3 24.1 167 36-232 113-292 (437)
271 2hes_X YDR267CP; beta-propelle 98.1 0.0023 7.7E-08 56.5 23.9 160 36-232 60-230 (330)
272 2pm7_B Protein transport prote 98.0 0.00078 2.7E-08 58.6 20.3 194 37-266 56-274 (297)
273 3b7f_A Glycosyl hydrolase, BNR 98.0 0.0011 3.6E-08 60.4 21.1 199 36-265 56-298 (394)
274 1kb0_A Quinohemoprotein alcoho 98.0 0.0041 1.4E-07 60.9 26.2 39 292-332 498-537 (677)
275 1p22_A F-BOX/WD-repeat protein 98.0 0.0096 3.3E-07 54.5 29.1 221 40-342 137-362 (435)
276 3bg1_A Protein SEC13 homolog; 98.0 0.0015 5E-08 57.4 20.7 194 36-266 59-282 (316)
277 2ovr_B FBW7, F-BOX/WD repeat p 97.9 0.014 4.8E-07 53.5 28.6 144 41-232 124-268 (445)
278 1w6s_A Methanol dehydrogenase 97.9 0.012 4.2E-07 56.6 26.7 40 292-333 494-534 (599)
279 2j04_A TAU60, YPL007P, hypothe 97.8 0.0049 1.7E-07 58.5 22.7 185 35-265 86-286 (588)
280 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.018 6.3E-07 52.7 29.1 225 37-342 162-388 (445)
281 2bkl_A Prolyl endopeptidase; m 97.8 0.0013 4.4E-08 64.6 19.5 158 37-232 123-304 (695)
282 4a5s_A Dipeptidyl peptidase 4 97.8 0.002 7E-08 63.7 21.0 142 37-219 19-189 (740)
283 2ad6_A Methanol dehydrogenase 97.8 0.026 8.9E-07 54.0 30.4 70 46-132 115-191 (571)
284 4ggc_A P55CDC, cell division c 97.8 0.015 5.2E-07 50.1 29.1 235 36-342 69-312 (318)
285 3iuj_A Prolyl endopeptidase; h 97.8 0.0066 2.3E-07 59.5 23.6 210 37-309 131-367 (693)
286 4asc_A Kelch repeat and BTB do 97.8 0.017 5.8E-07 50.5 26.1 215 56-332 13-250 (315)
287 2oaj_A Protein SNI1; WD40 repe 97.8 0.0029 9.8E-08 64.2 21.3 157 36-232 60-242 (902)
288 2xdw_A Prolyl endopeptidase; a 97.8 0.023 8E-07 55.7 27.4 157 37-231 173-367 (710)
289 4gga_A P55CDC, cell division c 97.8 0.01 3.5E-07 54.1 23.4 192 39-266 192-384 (420)
290 1kb0_A Quinohemoprotein alcoho 97.8 0.037 1.3E-06 54.1 29.0 173 39-232 123-346 (677)
291 3ii7_A Kelch-like protein 7; p 97.8 0.017 5.8E-07 50.2 26.8 224 55-343 23-270 (306)
292 2gop_A Trilobed protease; beta 97.7 0.0028 9.5E-08 55.9 18.5 117 118-265 44-188 (347)
293 1p22_A F-BOX/WD-repeat protein 97.7 0.025 8.4E-07 51.7 25.1 149 37-232 176-325 (435)
294 1yr2_A Prolyl oligopeptidase; 97.7 0.0024 8.3E-08 63.1 19.2 158 37-232 165-350 (741)
295 1zgk_A Kelch-like ECH-associat 97.7 0.022 7.5E-07 49.6 26.4 223 56-343 39-285 (308)
296 1k3i_A Galactose oxidase precu 97.7 0.014 4.9E-07 56.8 24.4 115 23-160 176-304 (656)
297 1yiq_A Quinohemoprotein alcoho 97.6 0.048 1.7E-06 53.4 27.5 40 292-333 496-536 (689)
298 2xbg_A YCF48-like protein; pho 97.6 0.031 1.1E-06 49.3 27.9 198 23-266 24-224 (327)
299 2oit_A Nucleoporin 214KDA; NH2 97.6 0.0098 3.3E-07 54.8 20.8 158 36-232 94-278 (434)
300 1kv9_A Type II quinohemoprotei 97.6 0.04 1.4E-06 53.8 25.8 40 292-333 479-519 (668)
301 2xn4_A Kelch-like protein 2; s 97.6 0.031 1.1E-06 48.4 27.2 222 56-343 30-274 (302)
302 3vu4_A KMHSV2; beta-propeller 97.6 0.038 1.3E-06 49.1 25.9 177 37-266 61-260 (355)
303 4a9v_A PHOX; hydrolase, beta-p 97.5 0.0018 6.3E-08 61.0 14.8 125 33-162 382-551 (592)
304 2vpj_A Kelch-like protein 12; 97.5 0.037 1.2E-06 47.8 27.4 221 56-343 31-276 (301)
305 4ggc_A P55CDC, cell division c 97.5 0.036 1.2E-06 47.7 23.2 191 39-266 112-304 (318)
306 2j04_B YDR362CP, TAU91; beta p 97.5 0.0031 1E-07 59.8 16.3 193 36-266 209-417 (524)
307 2j04_B YDR362CP, TAU91; beta p 97.5 0.011 3.6E-07 56.1 19.4 147 97-266 209-375 (524)
308 1flg_A Protein (quinoprotein e 97.4 0.062 2.1E-06 51.5 23.9 39 292-332 507-546 (582)
309 4gq1_A NUP37; propeller, trans 97.4 0.037 1.3E-06 50.0 21.1 190 37-266 139-379 (393)
310 2xbg_A YCF48-like protein; pho 97.3 0.07 2.4E-06 47.0 27.8 230 37-342 82-319 (327)
311 1yr2_A Prolyl oligopeptidase; 97.3 0.11 3.7E-06 51.3 25.6 166 44-232 116-303 (741)
312 2hz6_A Endoplasmic reticulum t 97.2 0.00037 1.3E-08 63.0 5.9 140 45-232 8-149 (369)
313 1tl2_A L10, protein (tachylect 97.2 0.013 4.3E-07 48.5 14.1 117 27-160 33-152 (236)
314 2bkl_A Prolyl endopeptidase; m 97.2 0.2 6.7E-06 48.9 26.0 155 38-232 171-351 (695)
315 2oit_A Nucleoporin 214KDA; NH2 97.2 0.0071 2.4E-07 55.8 14.3 166 98-309 39-231 (434)
316 2woz_A Kelch repeat and BTB do 97.2 0.1 3.5E-06 45.5 27.1 213 56-332 24-260 (318)
317 1w6s_A Methanol dehydrogenase 97.1 0.099 3.4E-06 50.2 22.2 125 46-194 62-195 (599)
318 1yiq_A Quinohemoprotein alcoho 97.1 0.12 4E-06 50.6 22.8 81 181-266 455-537 (689)
319 1kv9_A Type II quinohemoprotei 97.0 0.12 4E-06 50.5 22.1 83 181-266 438-520 (668)
320 1tl2_A L10, protein (tachylect 97.0 0.018 6E-07 47.6 13.3 143 97-264 42-199 (236)
321 3iuj_A Prolyl endopeptidase; h 97.0 0.31 1.1E-05 47.6 28.0 113 98-232 236-359 (693)
322 2wg3_C Hedgehog-interacting pr 96.9 0.0078 2.7E-07 56.0 12.0 135 142-302 14-187 (463)
323 2w18_A PALB2, fancn, partner a 96.9 0.18 6.3E-06 44.7 20.0 154 38-230 182-355 (356)
324 3zwu_A Alkaline phosphatase PH 96.8 0.016 5.5E-07 55.3 13.4 121 94-220 382-550 (592)
325 2cn3_A Xyloglucanase, beta-1,4 96.8 0.44 1.5E-05 46.9 26.1 125 23-160 10-151 (737)
326 4asc_A Kelch repeat and BTB do 96.8 0.15 5.1E-06 44.3 18.9 194 109-343 6-219 (315)
327 1flg_A Protein (quinoprotein e 96.7 0.49 1.7E-05 45.2 25.6 82 180-266 465-548 (582)
328 2xn4_A Kelch-like protein 2; s 96.6 0.32 1.1E-05 41.8 26.3 191 56-307 77-282 (302)
329 2woz_A Kelch repeat and BTB do 96.5 0.29 9.8E-06 42.5 18.4 194 109-342 17-228 (318)
330 1k3i_A Galactose oxidase precu 96.2 0.57 2E-05 45.4 20.4 115 98-232 188-323 (656)
331 2vpj_A Kelch-like protein 12; 96.2 0.52 1.8E-05 40.4 26.1 137 56-232 78-231 (301)
332 1sqj_A OXG-RCBH, oligoxylogluc 96.2 1.2 3.9E-05 44.3 25.3 172 26-228 6-197 (789)
333 3ii7_A Kelch-like protein 7; p 96.1 0.56 1.9E-05 40.3 27.9 189 56-303 70-274 (306)
334 3zwu_A Alkaline phosphatase PH 96.1 0.12 4E-06 49.4 14.2 126 33-162 382-551 (592)
335 2uvk_A YJHT; unknown function, 96.0 0.76 2.6E-05 40.5 24.2 161 45-231 19-225 (357)
336 1zgk_A Kelch-like ECH-associat 96.0 0.69 2.4E-05 39.9 27.0 185 56-303 90-289 (308)
337 2zwa_A Leucine carboxyl methyl 95.7 1.8 6.1E-05 42.3 24.5 158 44-233 396-578 (695)
338 3a0f_A Xyloglucanase; beta-pro 95.1 2.9 9.8E-05 41.3 24.6 175 28-229 14-210 (763)
339 2w18_A PALB2, fancn, partner a 94.2 2.8 9.6E-05 37.1 22.7 149 107-266 192-346 (356)
340 2uvk_A YJHT; unknown function, 94.0 2.9 9.9E-05 36.6 22.3 81 107-198 19-103 (357)
341 4gq1_A NUP37; propeller, trans 93.7 3.5 0.00012 36.7 23.4 151 45-232 100-286 (393)
342 1xip_A Nucleoporin NUP159; bet 93.5 3.7 0.00013 36.9 16.1 153 36-232 39-191 (388)
343 2zwa_A Leucine carboxyl methyl 92.3 8.9 0.0003 37.3 19.1 164 38-232 443-635 (695)
344 2hz6_A Endoplasmic reticulum t 92.1 0.16 5.3E-06 45.5 5.0 51 180-232 18-68 (369)
345 2xe4_A Oligopeptidase B; hydro 91.5 11 0.00039 36.9 23.6 114 99-232 177-304 (751)
346 2cn3_A Xyloglucanase, beta-1,4 87.0 24 0.00082 34.5 23.0 124 97-229 24-161 (737)
347 3a0f_A Xyloglucanase; beta-pro 82.0 41 0.0014 33.0 17.3 163 38-232 591-762 (763)
348 1xip_A Nucleoporin NUP159; bet 81.7 29 0.00098 31.0 20.9 130 36-218 89-231 (388)
349 2xe4_A Oligopeptidase B; hydro 81.0 43 0.0015 32.7 29.8 157 38-230 224-398 (751)
350 2be1_A Serine/threonine-protei 78.7 7.2 0.00025 34.3 8.1 28 256-308 110-138 (339)
351 1sqj_A OXG-RCBH, oligoxylogluc 73.8 72 0.0025 31.4 23.3 121 96-229 15-149 (789)
352 2be1_A Serine/threonine-protei 71.7 20 0.00069 31.4 9.0 28 107-134 10-37 (339)
353 3f6k_A Sortilin; protein sorti 70.2 72 0.0025 30.9 13.2 108 108-228 56-165 (685)
354 3sbq_A Nitrous-oxide reductase 69.2 21 0.00073 33.7 8.9 107 142-266 323-454 (638)
355 3ei3_A DNA damage-binding prot 65.7 1.3E+02 0.0045 31.2 16.1 165 25-232 819-999 (1158)
356 3sbq_A Nitrous-oxide reductase 63.9 32 0.0011 32.5 8.9 85 182-266 299-397 (638)
357 3s9j_A Member of DUF4221 famil 50.6 81 0.0028 27.9 9.1 72 210-308 37-117 (369)
358 3f6k_A Sortilin; protein sorti 30.1 3.8E+02 0.013 25.8 21.2 89 51-159 60-156 (685)
359 3al9_A Plexin-A2; beta-propell 27.3 1.8E+02 0.0063 27.1 7.8 70 40-125 405-479 (539)
360 1ew4_A CYAY protein; friedreic 24.9 1.4E+02 0.0049 20.9 5.1 23 107-130 57-79 (106)
361 3nvq_A Semaphorin-7A; beta-pro 20.8 5.4E+02 0.018 24.3 9.8 64 47-126 381-448 (590)
362 3hun_A Penicillin-binding prot 20.2 48 0.0017 30.2 2.3 15 1-15 23-37 (453)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=1.3e-31 Score=241.08 Aligned_cols=305 Identities=35% Similarity=0.660 Sum_probs=216.4
Q ss_pred CccccccccCC-CCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeee
Q 019290 22 SSKSYQQLQLP-GVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLG 100 (343)
Q Consensus 22 ~~~~~~~~~~~-~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (343)
+...++.+++| ++..|+++++|++|+++|++..+++|++|++.++.+..+...........|.+............|.+
T Consensus 5 ~~~~~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~g 84 (322)
T 2fp8_A 5 SSPILKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYD 84 (322)
T ss_dssp -----CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEE
T ss_pred cCCccceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCce
Confidence 44456778888 57889999999999989999999999999998877777653221111011111100011122356899
Q ss_pred EEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeC-CCCeEEEEeCCcccccccceeeeeecCC
Q 019290 101 IKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDP-NTGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 101 i~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
+++++++++|||++...+++++|+++++++.+.....+.+...++++++|+ + |++|+++....+...++...+.+...
T Consensus 85 i~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~-G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 85 ISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRT-GIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp EEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTT-CCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred EEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCC-CEEEEECCcccccccccceehcccCC
Confidence 999964789999988888999999887766654433334456789999998 6 99999987532222111111112233
Q ss_pred CceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC
Q 019290 180 SGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE 259 (343)
Q Consensus 180 ~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 259 (343)
.++|+++|+++++.+.+...+..|++++++++++.||++++..++|++|++++... +..+.+...++ |+++++|++|+
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-~~~~~~~~~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-GTAEVLVKIPN-PGNIKRNADGH 241 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-TCEEEEEECSS-EEEEEECTTSC
T ss_pred CceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-CccceEEeCCC-CCCeEECCCCC
Confidence 57899999988887766666788999999999999999999889999999886432 34445544556 99999999999
Q ss_pred EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEE
Q 019290 260 FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVV 339 (343)
Q Consensus 260 lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~ 339 (343)
||++++..+..+ |.....+.|+++|++|+.+..+..+++.....++.+...+++|||++...++|.
T Consensus 242 l~va~~~~~~~~--------------~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 242 FWVSSSEELDGN--------------MHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVG 307 (322)
T ss_dssp EEEEEEEETTSS--------------TTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEE
T ss_pred EEEEecCccccc--------------ccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceE
Confidence 999986521110 000012478999999999988887776445667777778999999999999999
Q ss_pred EEcC
Q 019290 340 VIKA 343 (343)
Q Consensus 340 ~~~~ 343 (343)
+|++
T Consensus 308 ~~~~ 311 (322)
T 2fp8_A 308 ILVY 311 (322)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9974
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.94 E-value=1.4e-24 Score=195.73 Aligned_cols=283 Identities=17% Similarity=0.200 Sum_probs=194.8
Q ss_pred ccCCC-CCCCceEEEcCCCCeeEEEe-------------cCCEEEEEEcCC--CCeEEeeecCCCccccccCCCCCcccC
Q 019290 29 LQLPG-VVGPESLAFDCNGEGPYVGV-------------SDGRILKWKAAN--SGWTEFATTAPHRAREICDGSTNTTLE 92 (343)
Q Consensus 29 ~~~~~-~~~p~~l~~d~~g~~l~~~~-------------~~g~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (343)
..+++ ...||+|+++++|. +|++. ..|+|+++|+++ .+..++...... ..
T Consensus 43 ~~i~~~~~G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~-------------~~ 108 (355)
T 3sre_A 43 NLVKGIDNGSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNT-------------LD 108 (355)
T ss_dssp EECTTCCSCCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSS-------------CC
T ss_pred EEeCCCCCCcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCC-------------CC
Confidence 33455 35799999999987 67664 688999999874 344444321100 01
Q ss_pred CCcCCeeeEEEeCC-CC--eEEEEeCCC-----eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcc
Q 019290 93 PLCGRPLGIKFNPV-TC--DLYIADAYF-----GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIY 164 (343)
Q Consensus 93 ~~~~~p~gi~~~~~-~~--~l~v~~~~~-----gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~ 164 (343)
....+|+||.+..+ ++ +||++++.. ++++++++++....+ ....+.+++.+|++++++ +|++|+++....
T Consensus 109 ~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~-~~~~g~~~~~pND~~v~~-~G~fyvt~~~~f 186 (355)
T 3sre_A 109 ISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL-KTIRHKLLPSVNDIVAVG-PEHFYATNDHYF 186 (355)
T ss_dssp GGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE-EEECCTTCSSEEEEEEEE-TTEEEEEESCSC
T ss_pred cCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE-eccccCCCCCCceEEEeC-CCCEEecCCcEe
Confidence 23457999998652 23 699997653 388899886655443 444556788999999999 599999987521
Q ss_pred cccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec
Q 019290 165 FQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE 244 (343)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (343)
-...........+.+.+.||++|+. +.+.+..++..|||++++||++.||++++..++|++|+++.+..+...+.+ .
T Consensus 187 td~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~ 263 (355)
T 3sre_A 187 IDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-S 263 (355)
T ss_dssp SSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-E
T ss_pred CCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-e
Confidence 1100000000012346789999984 666777788999999999999999999999999999999765443445555 4
Q ss_pred CCCCCCceeeCC-CCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEEC----CCCCEEEEeeCCCCCccCCce
Q 019290 245 MPRFPDNIKSDS-KGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFD----VNGNVVDVLDGNEGNTLNSVS 319 (343)
Q Consensus 245 ~~~~p~~i~~d~-~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d----~~g~~~~~~~~~~~~~~~~~~ 319 (343)
.++.|+|+++|+ +|++|+++...+.++. .-.|...+...|.++. .+++....+.+ +|......+
T Consensus 264 ~~g~PDGi~vD~e~G~lwva~~~~g~~v~----------~~~P~~~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~T 332 (355)
T 3sre_A 264 FDTLVDNISVDPVTGDLWVGCHPNGMRIF----------FYDAENPPGSEVLRIQDILSEEPKVTVVYAE-NGTVLQGST 332 (355)
T ss_dssp CSSEEEEEEECTTTCCEEEEEESCHHHHH----------SCCTTSCCCEEEEEEECTTSSSCEEEEEEEE-CSSSCCSEE
T ss_pred CCCCCceEEEeCCCCcEEEEecCCceEEE----------EECCCCCCCCEEEEEEccCCCCcEEEEEEEc-CCCEEEeeE
Confidence 577899999999 5999998753233221 0112223355777776 35667777776 676777788
Q ss_pred eEEEeCCEEEEecCCCCeEEEEc
Q 019290 320 EVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 320 ~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.+.+|+||||+.... ++.|+
T Consensus 333 ~a~~~~g~L~iGsv~~~-~l~c~ 354 (355)
T 3sre_A 333 VAAVYKGKLLIGTVFHK-ALYCD 354 (355)
T ss_dssp EEEEETTEEEEEESSSC-EEEEE
T ss_pred EEEEECCEEEEEEcCCC-ceecc
Confidence 88888999999999887 66665
No 3
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.94 E-value=1.1e-23 Score=186.58 Aligned_cols=259 Identities=17% Similarity=0.198 Sum_probs=186.0
Q ss_pred ccccccCCCCCCCceEEEcCCCC-eeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE
Q 019290 25 SYQQLQLPGVVGPESLAFDCNGE-GPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF 103 (343)
Q Consensus 25 ~~~~~~~~~~~~p~~l~~d~~g~-~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (343)
.++.+.. ++..|++++++++|+ ++|++..+++|++|++.++ ...+. .....|.++++
T Consensus 19 ~~~~l~~-~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~--------------------~~~~~~~~l~~ 76 (296)
T 3e5z_A 19 EARRLAD-GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM--------------------HPSHHQNGHCL 76 (296)
T ss_dssp CCEEEEC-CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE--------------------SSCSSEEEEEE
T ss_pred cEEEEec-CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE--------------------CCCCCcceeeE
Confidence 3444443 455799999999998 7889999999999999887 66553 12245889999
Q ss_pred eCCCCeEEEEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccce-eeeeecCCCc
Q 019290 104 NPVTCDLYIADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYF-MSIATGDRSG 181 (343)
Q Consensus 104 ~~~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~-~~~~~~~~~~ 181 (343)
++ ++++|+++.. .+|+++|+++++++.+.......+...++++++|+ +|++|+++..... ...+. .........+
T Consensus 77 ~~-dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~-~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 77 NK-QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGI-DKPEEGYGGEMELPGR 153 (296)
T ss_dssp CT-TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHH-HCGGGSSCCCCCSSSC
T ss_pred CC-CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCcccc-ccccccccccccCCCc
Confidence 98 8899999765 57999999888877664433333446789999999 6999998753100 00000 0000011245
Q ss_pred eEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCcccc-ccceeeecCCCCCCceeeCCCCCE
Q 019290 182 RLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTT-YTPQLFAEMPRFPDNIKSDSKGEF 260 (343)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~p~~i~~d~~G~l 260 (343)
+|++++++ ++...+......+++++++++++.+ ++++..++|++|+++....+ ...+.+....+.|+++++|++|++
T Consensus 154 ~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l 231 (296)
T 3e5z_A 154 WVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLI 231 (296)
T ss_dssp EEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCE
T ss_pred EEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCE
Confidence 89999987 7777777777889999999999988 88888899999998643332 122333113457999999999999
Q ss_pred EEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEE---eCCEEEEecCCCCe
Q 019290 261 WIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQE---YGEYLYTGSSVQPY 337 (343)
Q Consensus 261 wi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~---~~g~l~i~~~~~~~ 337 (343)
|+++.. +|.++|++|+.+..+..+.+ +..+.. +++.||+++.. .
T Consensus 232 ~v~~~~--------------------------~v~~~~~~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t~~--~ 278 (296)
T 3e5z_A 232 WASAGD--------------------------GVHVLTPDGDELGRVLTPQT-----TSNLCFGGPEGRTLYMTVST--E 278 (296)
T ss_dssp EEEETT--------------------------EEEEECTTSCEEEEEECSSC-----CCEEEEESTTSCEEEEEETT--E
T ss_pred EEEcCC--------------------------eEEEECCCCCEEEEEECCCC-----ceeEEEECCCCCEEEEEcCC--e
Confidence 999943 89999999998888876543 333322 35689999874 5
Q ss_pred EEEEcC
Q 019290 338 VVVIKA 343 (343)
Q Consensus 338 i~~~~~ 343 (343)
++++++
T Consensus 279 l~~~~~ 284 (296)
T 3e5z_A 279 FWSIET 284 (296)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 877763
No 4
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.93 E-value=4.4e-24 Score=190.39 Aligned_cols=249 Identities=17% Similarity=0.224 Sum_probs=183.4
Q ss_pred CCCCCceEEEcCCCC-eeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEE
Q 019290 33 GVVGPESLAFDCNGE-GPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLY 111 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~-~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~ 111 (343)
++..+++++++++|+ ++|++..+++|+++++. ++...+.. ....++++++++ +++||
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~~~~~--------------------~~~~~~gl~~d~-dG~l~ 100 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVDVLLD--------------------ATAFTNGNAVDA-QQRLV 100 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEEEEEE--------------------SCSCEEEEEECT-TSCEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEEEEeC--------------------CCCccceeeECC-CCCEE
Confidence 455789999999998 77888999999999984 45555532 223578999998 88999
Q ss_pred EEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCccccc-ccceeee-eecCCCceEEEEeC
Q 019290 112 IADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQR-RQYFMSI-ATGDRSGRLLKYDP 188 (343)
Q Consensus 112 v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~-~~~~~~~-~~~~~~~~v~~~d~ 188 (343)
+++.. .+|.+++++ ++++.+.....+.+.+.++++++++ +|++|++|.. ++. .+++... ......++|+++|+
T Consensus 101 v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 101 HCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp EEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred EEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcC--CCccccccccccccccCCCeEEEEcC
Confidence 99765 579999987 7777665444444457799999999 6999998753 111 0000000 00112467999999
Q ss_pred CCCceEEeecCCCCcceeEEecCCCEEEEEEcCC-----CeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEE
Q 019290 189 LKKNVTVMYNGLSFPNGVALSNNNSFLLLAESAT-----LKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWI 262 (343)
Q Consensus 189 ~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~-----~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi 262 (343)
++++++.+. .+..++++++++|++.||++++.. +.|++|++++... ...+.+.. ..+.|+++++|++|+||+
T Consensus 177 ~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l-~~~~~~~~~~~~~pdgi~~d~~G~lwv 254 (305)
T 3dr2_A 177 DGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL-HDRRHFASVPDGLPDGFCVDRGGWLWS 254 (305)
T ss_dssp SSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE-EEEEEEECCSSSCCCSEEECTTSCEEE
T ss_pred CCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc-cCCeEEEECCCCCCCeEEECCCCCEEE
Confidence 878877766 777899999999999999998763 7999999876442 44444443 356799999999999999
Q ss_pred EeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEE--EeCCEEEEecCCCCeEEE
Q 019290 263 AMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQ--EYGEYLYTGSSVQPYVVV 340 (343)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~--~~~g~l~i~~~~~~~i~~ 340 (343)
++.. +|++++++|+.+..+..+.. +..+. ++++.||+++.. .+++
T Consensus 255 ~~~~--------------------------gv~~~~~~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~~~--~l~~ 301 (305)
T 3dr2_A 255 SSGT--------------------------GVCVFDSDGQLLGHIPTPGT-----ASNCTFDQAQQRLFITGGP--CLWM 301 (305)
T ss_dssp CCSS--------------------------EEEEECTTSCEEEEEECSSC-----CCEEEECTTSCEEEEEETT--EEEE
T ss_pred ecCC--------------------------cEEEECCCCCEEEEEECCCc-----eeEEEEeCCCCEEEEEcCC--eEEE
Confidence 9855 79999999999888876653 22222 346789999975 5777
Q ss_pred Ec
Q 019290 341 IK 342 (343)
Q Consensus 341 ~~ 342 (343)
++
T Consensus 302 ~~ 303 (305)
T 3dr2_A 302 LP 303 (305)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.93 E-value=5.3e-24 Score=189.19 Aligned_cols=244 Identities=12% Similarity=0.145 Sum_probs=179.6
Q ss_pred CCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEE
Q 019290 33 GVVGPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLY 111 (343)
Q Consensus 33 ~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~ 111 (343)
++.-+|+.+++++ +.++|++..+++|++||+.++....+. ....+.++++++ ++++|
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~---------------------~~~~~~~i~~~~-dG~l~ 68 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT---------------------MDAPVSSVALRQ-SGGYV 68 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE---------------------CSSCEEEEEEBT-TSSEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe---------------------CCCceEEEEECC-CCCEE
Confidence 4557999999995 567778889999999999887665442 123578999998 78899
Q ss_pred EEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCC
Q 019290 112 IADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKK 191 (343)
Q Consensus 112 v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 191 (343)
++. ..+|+++|+++++++.+.......+...++++++|+ +|++|+++....... .......+.||+++++ +
T Consensus 69 v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~------~~~~~~~~~l~~~d~~-g 139 (297)
T 3g4e_A 69 ATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAP------AVLERHQGALYSLFPD-H 139 (297)
T ss_dssp EEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBT------TBCCTTCEEEEEECTT-S
T ss_pred EEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCccccc------ccccCCCcEEEEEECC-C
Confidence 996 679999999999887765443333456789999999 699999875311000 0001124689999986 5
Q ss_pred ceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEcc-Cccccccceeeec---CCCCCCceeeCCCCCEEEEeccC
Q 019290 192 NVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQ-GERTTYTPQLFAE---MPRFPDNIKSDSKGEFWIAMNSA 267 (343)
Q Consensus 192 ~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~-~~~~~~~~~~~~~---~~~~p~~i~~d~~G~lwi~~~~~ 267 (343)
+...+...+..++++++++|++.||++++..++|++|+++ ....+...+.+.. ..+.|+++++|++|+||++++.
T Consensus 140 ~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~- 218 (297)
T 3g4e_A 140 HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN- 218 (297)
T ss_dssp CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-
T ss_pred CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-
Confidence 6666666677899999999999999999989999999975 2222122334433 2357999999999999999987
Q ss_pred CCccccccccccccccCCCcccCCCeEEEECCC-CCEEEEeeCCCCCccCCceeEEE---eCCEEEEecCCC
Q 019290 268 RGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGNEGNTLNSVSEVQE---YGEYLYTGSSVQ 335 (343)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~---~~g~l~i~~~~~ 335 (343)
.+.|.++|++ |+.+..+..|.. .++.+.. +.++|||++...
T Consensus 219 -----------------------~~~v~~~d~~tG~~~~~i~~p~~----~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 219 -----------------------GGRVIRLDPVTGKRLQTVKLPVD----KTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp -----------------------TTEEEEECTTTCCEEEEEECSSS----BEEEEEEESGGGCEEEEEEBCT
T ss_pred -----------------------CCEEEEEcCCCceEEEEEECCCC----CceEEEEeCCCCCEEEEEcCCc
Confidence 4479999997 888888876532 3444433 357899999764
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.92 E-value=1.7e-22 Score=179.87 Aligned_cols=262 Identities=19% Similarity=0.274 Sum_probs=182.0
Q ss_pred CCCCCceEEEcCCCCeeEE-------EecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC
Q 019290 33 GVVGPESLAFDCNGEGPYV-------GVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP 105 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~-------~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (343)
++..|++++++++|+++++ +..+++|++||+.++++..+.... .......|.++++++
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~---------------~~~~~~~~~~i~~~~ 80 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPE---------------VNGYGGIPAGCQCDR 80 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCE---------------ETTEECCEEEEEECS
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecc---------------cCCCCCCCceEEEec
Confidence 5668999999999994445 477889999998887776553200 001224588999998
Q ss_pred CC-CeEEEEeCCCeEEEEeCCCCeEEEc-ccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceE
Q 019290 106 VT-CDLYIADAYFGLMVVGPNGGQAQQL-ASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRL 183 (343)
Q Consensus 106 ~~-~~l~v~~~~~gi~~~d~~~~~~~~~-~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v 183 (343)
+ ++||+++...+|+++|++ ++++.+ .......+...++++++|+ +|++|+++........++.. ......++|
T Consensus 81 -~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~--~~~~~~~~l 155 (314)
T 1pjx_A 81 -DANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTR--SMQEKFGSI 155 (314)
T ss_dssp -SSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCB--TTSSSCEEE
T ss_pred -CCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccc--cccCCCCeE
Confidence 6 899999877799999999 877765 4332233345689999999 59999998642000000000 001123679
Q ss_pred EEEeCCCCceEEeecCCCCcceeEEe----cCCCEEEEEEcCCCeEEEEEccCccccccceeeecCC----CCCCceeeC
Q 019290 184 LKYDPLKKNVTVMYNGLSFPNGVALS----NNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMP----RFPDNIKSD 255 (343)
Q Consensus 184 ~~~d~~~~~~~~~~~~~~~~~~i~~~----~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~p~~i~~d 255 (343)
++++++ ++...+......+++++++ ++++.+|+++...++|++|++++...+...+.+.... +.|+++++|
T Consensus 156 ~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d 234 (314)
T 1pjx_A 156 YCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD 234 (314)
T ss_dssp EEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB
T ss_pred EEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC
Confidence 999987 6766655556678999999 9988899998888999999976322112222332222 458889999
Q ss_pred CCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CCEEEEeeCCCCCccCCceeEEEe-CCE-EEEec
Q 019290 256 SKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGNEGNTLNSVSEVQEY-GEY-LYTGS 332 (343)
Q Consensus 256 ~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~-~g~-l~i~~ 332 (343)
++|++|+++.. .++|.++|++ ++.+..+..+. ..+..+..+ +|+ ||+++
T Consensus 235 ~~G~l~v~~~~------------------------~~~i~~~d~~~g~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 235 EDNNLLVANWG------------------------SSHIEVFGPDGGQPKMRIRCPF----EKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp TTCCEEEEEET------------------------TTEEEEECTTCBSCSEEEECSS----SCEEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEEcC------------------------CCEEEEEcCCCCcEeEEEeCCC----CCceeEEECCCCCEEEEEe
Confidence 99999999865 3589999997 77666665432 234455443 454 99999
Q ss_pred CCCCeEEEEcC
Q 019290 333 SVQPYVVVIKA 343 (343)
Q Consensus 333 ~~~~~i~~~~~ 343 (343)
...+.|.+++.
T Consensus 287 ~~~~~l~~~~~ 297 (314)
T 1pjx_A 287 HENNAVWKFEW 297 (314)
T ss_dssp TTTTEEEEEEC
T ss_pred CCCCeEEEEeC
Confidence 99889999863
No 7
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.89 E-value=2.7e-20 Score=166.01 Aligned_cols=239 Identities=16% Similarity=0.167 Sum_probs=168.6
Q ss_pred ccccccccCCCCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEE
Q 019290 23 SKSYQQLQLPGVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIK 102 (343)
Q Consensus 23 ~~~~~~~~~~~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (343)
.+...+++.+ ..|++++++++|+++|++..+++|+++|++++ ...+. .....|++++
T Consensus 22 ~~~~~~~p~~--~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~--------------------~~~~~p~gia 78 (306)
T 2p4o_A 22 AKIITSFPVN--TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA--------------------TVEGKVSGLA 78 (306)
T ss_dssp EEEEEEECTT--CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE--------------------ECSSEEEEEE
T ss_pred ceEeEeCCCC--CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE--------------------eCCCCceeEE
Confidence 4445555554 47999999999996667778999999998874 33222 1123689999
Q ss_pred EeCCCCeEEEEeCC-C--eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCC
Q 019290 103 FNPVTCDLYIADAY-F--GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 103 ~~~~~~~l~v~~~~-~--gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
+++ +++||+++.. + .|++++..+++++.+..... ...+++++..+ ++.+|+++..
T Consensus 79 ~~~-dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~---~~~~~g~~~~~-~~~~~v~d~~----------------- 136 (306)
T 2p4o_A 79 FTS-NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPD---AIFLNGITPLS-DTQYLTADSY----------------- 136 (306)
T ss_dssp ECT-TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTT---CSCEEEEEESS-SSEEEEEETT-----------------
T ss_pred EcC-CCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCC---ccccCcccccC-CCcEEEEECC-----------------
Confidence 998 7889999854 2 38999988888876644321 24567777777 5889998864
Q ss_pred CceEEEEeCCCCceEEe-----------ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCC
Q 019290 180 SGRLLKYDPLKKNVTVM-----------YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRF 248 (343)
Q Consensus 180 ~~~v~~~d~~~~~~~~~-----------~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
.+.||++|+.+++.+.. ...+..++++ +++++.||++++..++|++|+++++..+...+.+... ..
T Consensus 137 ~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~ 213 (306)
T 2p4o_A 137 RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TN 213 (306)
T ss_dssp TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CC
T ss_pred CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CC
Confidence 56899999875532211 1234568888 7889999999999999999998753322344444433 35
Q ss_pred CCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEE-----
Q 019290 249 PDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQE----- 323 (343)
Q Consensus 249 p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~----- 323 (343)
|+++++|++|++|++++. .+.|.++|++|+.......+.+ ...++.+..
T Consensus 214 P~gi~vd~dG~l~va~~~------------------------~~~V~~~~~~G~~~~~~~~~~~--~~~p~~~a~~g~~~ 267 (306)
T 2p4o_A 214 IDDFAFDVEGNLYGATHI------------------------YNSVVRIAPDRSTTIIAQAEQG--VIGSTAVAFGQTEG 267 (306)
T ss_dssp CSSEEEBTTCCEEEECBT------------------------TCCEEEECTTCCEEEEECGGGT--CTTEEEEEECCSTT
T ss_pred CCCeEECCCCCEEEEeCC------------------------CCeEEEECCCCCEEEEeecccc--cCCceEEEEecccC
Confidence 999999999999999986 4588999999887543222211 234555543
Q ss_pred eCCEEEEecCCC
Q 019290 324 YGEYLYTGSSVQ 335 (343)
Q Consensus 324 ~~g~l~i~~~~~ 335 (343)
+.++||+++...
T Consensus 268 d~~~LyVt~~~~ 279 (306)
T 2p4o_A 268 DCTAIYVVTNGG 279 (306)
T ss_dssp TTTEEEEEECTT
T ss_pred CCCEEEEECCCC
Confidence 358999998753
No 8
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.89 E-value=8.5e-21 Score=170.81 Aligned_cols=245 Identities=17% Similarity=0.190 Sum_probs=175.7
Q ss_pred ccccCCCCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC
Q 019290 27 QQLQLPGVVGPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP 105 (343)
Q Consensus 27 ~~~~~~~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (343)
+.+.-..+..+++++++++ +.++|++..+++|+++|+++++...+.. ...+.++++++
T Consensus 41 ~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~---------------------~~~v~~i~~~~ 99 (326)
T 2ghs_A 41 RVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL---------------------PFMGSALAKIS 99 (326)
T ss_dssp EEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC---------------------SSCEEEEEEEE
T ss_pred EEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC---------------------CCcceEEEEeC
Confidence 3443334456899999997 5566788888999999998876554421 12477899998
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 106 VTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 106 ~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
++++|++. ..+|+++|+++++++.+.......+...++++++|+ +|++|+++.... .....++|++
T Consensus 100 -dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~-----------~~~~~~~l~~ 165 (326)
T 2ghs_A 100 -DSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRK-----------AETGAGSIYH 165 (326)
T ss_dssp -TTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETT-----------CCTTCEEEEE
T ss_pred -CCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCc-----------CCCCceEEEE
Confidence 89999996 678999999988877664322222335689999999 599999874310 0112467999
Q ss_pred EeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEcc-Ccc-ccccceeeec---CCCCCCceeeCCCCCE
Q 019290 186 YDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQ-GER-TTYTPQLFAE---MPRFPDNIKSDSKGEF 260 (343)
Q Consensus 186 ~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~-~~~-~~~~~~~~~~---~~~~p~~i~~d~~G~l 260 (343)
++ +++.+.+......++++++++|++.+|++++..++|++++++ ... .+...+.+.. ..+.|+++++|++|++
T Consensus 166 ~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l 243 (326)
T 2ghs_A 166 VA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI 243 (326)
T ss_dssp EE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE
T ss_pred Ee--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE
Confidence 99 477666555556789999999999999999888999999986 111 1122233332 2356889999999999
Q ss_pred EEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEE---eCCEEEEecCCCC
Q 019290 261 WIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQE---YGEYLYTGSSVQP 336 (343)
Q Consensus 261 wi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~---~~g~l~i~~~~~~ 336 (343)
|+++.. .++|+++|++++.+..+..+.. .++.+.. +.+.||+++....
T Consensus 244 wva~~~------------------------~~~v~~~d~~g~~~~~i~~~~~----~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 244 WNARWG------------------------EGAVDRYDTDGNHIARYEVPGK----QTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEEET------------------------TTEEEEECTTCCEEEEEECSCS----BEEEEEEESTTSCEEEEEEBCTT
T ss_pred EEEEeC------------------------CCEEEEECCCCCEEEEEECCCC----CcEEEEEecCCCCEEEEEecCCC
Confidence 999875 3489999999988777765532 3444443 3478999988763
No 9
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.88 E-value=1.8e-19 Score=158.88 Aligned_cols=241 Identities=14% Similarity=0.156 Sum_probs=175.4
Q ss_pred cccccCC-CCCCCceEEEcCCCCeeEEE-ecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE
Q 019290 26 YQQLQLP-GVVGPESLAFDCNGEGPYVG-VSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF 103 (343)
Q Consensus 26 ~~~~~~~-~~~~p~~l~~d~~g~~l~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (343)
.+++.+| +...|++|++|++|+ +|++ ..+++|.++|+. +++..+.. ......|.++++
T Consensus 10 ~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~-~~~~~~~~------------------~~~~~~~~~i~~ 69 (300)
T 2qc5_A 10 LEEFNLSIPDSGPYGITSSEDGK-VWFTQHKANKISSLDQS-GRIKEFEV------------------PTPDAKVMCLIV 69 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEC------------------SSTTCCEEEEEE
T ss_pred EEEEecCCCCCCcceeeECCCCC-EEEEcCCCCeEEEECCC-CceEEEEC------------------CCCCCcceeEEE
Confidence 4566777 567899999999999 5554 467899999988 66665532 112346889999
Q ss_pred eCCCCeEEEEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCce
Q 019290 104 NPVTCDLYIADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 104 ~~~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
++ ++++|+++.. .+|+++|++ ++...+.... ....++++++++ +|++|+++.. .+.
T Consensus 70 ~~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~-~g~l~v~~~~-----------------~~~ 126 (300)
T 2qc5_A 70 SS-LGDIWFTENGANKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGL-NGDIWFTQLN-----------------GDR 126 (300)
T ss_dssp CT-TSCEEEEETTTTEEEEECTT-SCEEEEECSS---TTCCEEEEEECS-TTCEEEEETT-----------------TTE
T ss_pred CC-CCCEEEEecCCCeEEEECCC-CCeEEecCCC---CCCCCccceECC-CCCEEEEccC-----------------CCe
Confidence 98 8899999864 459999998 6665442211 125688999999 5999998864 467
Q ss_pred EEEEeCCCCceEEee--cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee-c-CCCCCCceeeCCCC
Q 019290 183 LLKYDPLKKNVTVMY--NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA-E-MPRFPDNIKSDSKG 258 (343)
Q Consensus 183 v~~~d~~~~~~~~~~--~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~-~~~~p~~i~~d~~G 258 (343)
|+++|++ ++...+. .....+.+++++++++ +|+++...+.|++++.++ +...+. . ....|.++++|++|
T Consensus 127 i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~i~~d~~g 199 (300)
T 2qc5_A 127 IGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITNTG-----KLEEYPLPTNAAAPVGITSGNDG 199 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC-----CEEEEECSSTTCCEEEEEECTTS
T ss_pred EEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECCCC-----cEEEeeCCCCCCCcceEEECCCC
Confidence 9999987 6665432 2356789999999887 899988788999998743 222221 1 12357889999999
Q ss_pred CEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCe
Q 019290 259 EFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPY 337 (343)
Q Consensus 259 ~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~ 337 (343)
++|+++.. .+.|++++++++.... ..+.. ...+..+..+ +|+||+++...+.
T Consensus 200 ~l~v~~~~------------------------~~~i~~~~~~g~~~~~-~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~ 252 (300)
T 2qc5_A 200 ALWFVEIM------------------------GNKIGRITTTGEISEY-DIPTP--NARPHAITAGKNSEIWFTEWGANQ 252 (300)
T ss_dssp SEEEEETT------------------------TTEEEEECTTCCEEEE-ECSST--TCCEEEEEECSTTCEEEEETTTTE
T ss_pred CEEEEccC------------------------CCEEEEEcCCCcEEEE-ECCCC--CCCceEEEECCCCCEEEeccCCCe
Confidence 99999876 3478999997776543 22322 3445566555 7899999999999
Q ss_pred EEEEcC
Q 019290 338 VVVIKA 343 (343)
Q Consensus 338 i~~~~~ 343 (343)
|.++++
T Consensus 253 i~~~~~ 258 (300)
T 2qc5_A 253 IGRITN 258 (300)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 999874
No 10
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.88 E-value=4.8e-20 Score=165.68 Aligned_cols=251 Identities=20% Similarity=0.227 Sum_probs=176.1
Q ss_pred CCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 34 VVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 34 ~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
...|++++++++|+++|++..+++|++||++++++..+.. .....|.++++++ ++++|++
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~-------------------~~~~~~~~i~~~~-dg~l~v~ 103 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV-------------------SHKANPAAIKIHK-DGRLFVC 103 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE-------------------CSSSSEEEEEECT-TSCEEEE
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee-------------------CCCCCcceEEECC-CCcEEEE
Confidence 3468999999999955577888999999998887766531 1123588999998 7899999
Q ss_pred eCCC-----eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 114 DAYF-----GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 114 ~~~~-----gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
+... +|+++|+++++.+.+.... .....++++++|+ +|++|+++.... .....++|+++++
T Consensus 104 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~i~~d~-~g~l~v~~~~~~-----------~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 104 YLGDFKSTGGIFAATENGDNLQDIIEDL--STAYCIDDMVFDS-KGGFYFTDFRGY-----------STNPLGGVYYVSP 169 (333)
T ss_dssp ECTTSSSCCEEEEECTTSCSCEEEECSS--SSCCCEEEEEECT-TSCEEEEECCCB-----------TTBCCEEEEEECT
T ss_pred eCCCCCCCceEEEEeCCCCEEEEEEccC--ccCCcccceEECC-CCCEEEEecccc-----------ccCCCceEEEEeC
Confidence 7655 7999999988766432211 1235688999999 599999876310 0111467999998
Q ss_pred CCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccc-cccc--eeeecCC--CCCCceeeCCCCCEEEE
Q 019290 189 LKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERT-TYTP--QLFAEMP--RFPDNIKSDSKGEFWIA 263 (343)
Q Consensus 189 ~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~-~~~~--~~~~~~~--~~p~~i~~d~~G~lwi~ 263 (343)
++++...+......+++++++++++.+|+++...++|++|+++.+.. +... ..+.... ..|+++++|++|++|++
T Consensus 170 ~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~ 249 (333)
T 2dg1_A 170 DFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA 249 (333)
T ss_dssp TSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE
T ss_pred CCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEE
Confidence 87777665555567899999999999999988788999999853211 0111 1111122 35888999999999999
Q ss_pred eccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCC--CccCCceeEEE--eCCEEEEecCCC----
Q 019290 264 MNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEG--NTLNSVSEVQE--YGEYLYTGSSVQ---- 335 (343)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~--~~~~~~~~~~~--~~g~l~i~~~~~---- 335 (343)
+.. .+.|.++|++++.+..+..+.. .....+..+.. ++++||+++...
T Consensus 250 ~~~------------------------~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~ 305 (333)
T 2dg1_A 250 MYG------------------------QGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGG 305 (333)
T ss_dssp EET------------------------TTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTC
T ss_pred EcC------------------------CCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCC
Confidence 865 3488999999888777765432 01113333333 346899998873
Q ss_pred -CeEEEEc
Q 019290 336 -PYVVVIK 342 (343)
Q Consensus 336 -~~i~~~~ 342 (343)
..+.+++
T Consensus 306 ~~~l~~~~ 313 (333)
T 2dg1_A 306 GSMLYTVN 313 (333)
T ss_dssp CEEEEEEE
T ss_pred CceEEEEe
Confidence 3566654
No 11
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.88 E-value=2.5e-19 Score=157.58 Aligned_cols=242 Identities=13% Similarity=0.221 Sum_probs=169.0
Q ss_pred CCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 33 GVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
.+..|.+++++++|++++++..+++|.+||+++.....+.... ........|.++++++.+++||+
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~--------------~~~~~~~~p~~i~~~~~~g~l~v 93 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECG--------------KRDSQLLYPNRVAVVRNSGDIIV 93 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBS--------------SSTTCBSSEEEEEEETTTTEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccC--------------CCcccccCceEEEEEcCCCeEEE
Confidence 4567999999999995556678899999998865444442110 00122346899999544899999
Q ss_pred EeC--CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC
Q 019290 113 ADA--YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK 190 (343)
Q Consensus 113 ~~~--~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 190 (343)
++. ...|+++|.++.....+.. .....++++++++ +|++|+++.. .+.|+++|+++
T Consensus 94 ~~~~~~~~i~~~d~~g~~~~~~~~----~~~~~~~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~g 151 (286)
T 1q7f_A 94 TERSPTHQIQIYNQYGQFVRKFGA----TILQHPRGVTVDN-KGRIIVVECK-----------------VMRVIIFDQNG 151 (286)
T ss_dssp EECGGGCEEEEECTTSCEEEEECT----TTCSCEEEEEECT-TSCEEEEETT-----------------TTEEEEECTTS
T ss_pred EcCCCCCEEEEECCCCcEEEEecC----ccCCCceEEEEeC-CCCEEEEECC-----------------CCEEEEEcCCC
Confidence 985 3569999966443333311 1235689999999 5999998865 56799999775
Q ss_pred CceEEee--cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC--CCCCCceeeCCCCCEEEEecc
Q 019290 191 KNVTVMY--NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM--PRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 191 ~~~~~~~--~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.....+. ..+..|.+++++++++ +|+++..+++|++|+.++. ....+... ...|.++++|++|++|+++..
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQ----YLRQIGGEGITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTCC----EEEEESCTTTSCSEEEEEECTTCCEEEEECS
T ss_pred CEEEEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCCC----EEEEEccCCccCCCcEEEECCCCCEEEEeCC
Confidence 4444433 3456789999999875 8999888899999997652 22223221 135889999999999999876
Q ss_pred CCCccccccccccccccCCCcccCCC-eEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 267 ARGKIESNKKTAFCEETAKPWFLRDP-VGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
.+ .|.+++++|+.+..+..... ...+..+..+ +|+||+++. .++|.+++
T Consensus 227 ------------------------~~~~i~~~~~~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~vs~~-~~~v~v~~ 277 (286)
T 1q7f_A 227 ------------------------NNFNLTIFTQDGQLISALESKVK--HAQCFDVALMDDGSVVLASK-DYRLYIYR 277 (286)
T ss_dssp ------------------------SSCEEEEECTTSCEEEEEEESSC--CSCEEEEEEETTTEEEEEET-TTEEEEEE
T ss_pred ------------------------CCEEEEEECCCCCEEEEEcccCC--CCcceeEEECCCCcEEEECC-CCeEEEEE
Confidence 33 78899999988777654322 2234444444 899999964 67887775
No 12
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.87 E-value=8.5e-20 Score=158.89 Aligned_cols=233 Identities=21% Similarity=0.329 Sum_probs=165.1
Q ss_pred CCceEEEcCCCCeeEE-E-ecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 36 GPESLAFDCNGEGPYV-G-VSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~-~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
.|.+++++++|+ +|+ + ..+++|+++++.+.....+. ......|.++++++ +++||++
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~~-------------------~~~~~~p~~i~~~~-~g~l~v~ 83 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTVLP-------------------FNGLYQPQGLAVDG-AGTVYVT 83 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----EECC-------------------CCSCCSCCCEEECT-TCCEEEE
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccceEe-------------------eCCcCCcceeEECC-CCCEEEE
Confidence 899999999999 665 5 67789999998765433321 12234688999998 7889999
Q ss_pred eCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV 193 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 193 (343)
+...+|+++|++++....+.. .....++++++++ +|++|+++.. .+.|++++..+...
T Consensus 84 ~~~~~i~~~d~~~~~~~~~~~----~~~~~p~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 84 DFNNRVVTLAAGSNNQTVLPF----DGLNYPEGLAVDT-QGAVYVADRG-----------------NNRVVKLAAGSKTQ 141 (270)
T ss_dssp ETTTEEEEECTTCSCCEECCC----CSCSSEEEEEECT-TCCEEEEEGG-----------------GTEEEEECTTCCSC
T ss_pred cCCCEEEEEeCCCceEeeeec----CCcCCCcceEECC-CCCEEEEECC-----------------CCEEEEEECCCcee
Confidence 875579999998766544321 1224688999999 5999998754 46799998654443
Q ss_pred EEe-ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEeccCCCcc
Q 019290 194 TVM-YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAMNSARGKI 271 (343)
Q Consensus 194 ~~~-~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~~~~~~~~ 271 (343)
... ...+..+.+++++++++ +|+++...++|++++.++... ..... ....|.++++|++|++|+++..
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~d~~g~l~v~~~~----- 211 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQ----VVLPFTDITAPWGIAVDEAGTVYVTEHN----- 211 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCE----EECCCSSCCSEEEEEECTTCCEEEEETT-----
T ss_pred EeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCce----EeecccCCCCceEEEECCCCCEEEEECC-----
Confidence 322 23345789999999886 999988888999999775321 11111 1135889999999999999976
Q ss_pred ccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEcC
Q 019290 272 ESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 343 (343)
.+.|.+++++++....... .+ ...+..+..+ +|+||+++...++|.+|+.
T Consensus 212 -------------------~~~v~~~~~~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 212 -------------------TNQVVKLLAGSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp -------------------TSCEEEECTTCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred -------------------CCcEEEEcCCCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 3588999998765444321 11 2445666655 7889999999999999863
No 13
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.86 E-value=3.7e-19 Score=165.02 Aligned_cols=241 Identities=15% Similarity=0.089 Sum_probs=172.0
Q ss_pred CCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 33 GVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
++..|.+|++|++|++++++..+++|.++|++++....+.. ....+. ++++++++.||+
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~--------------------~~~~~~-ia~~~~g~~l~~ 187 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP--------------------GFKGGK-PAVTKDKQRVYS 187 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE--------------------TCCBCB-CEECTTSSEEEE
T ss_pred ccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec--------------------cCCCCc-eeEecCCCcEEE
Confidence 46689999999999966677778999999998877766542 122356 889986667899
Q ss_pred EeCCC--eEEEEeCCCCeE-EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC
Q 019290 113 ADAYF--GLMVVGPNGGQA-QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL 189 (343)
Q Consensus 113 ~~~~~--gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 189 (343)
++... .|++++++++.. ..+... .......++++++++.+|.||+++. .+.|+++|++
T Consensus 188 ~d~~~~~~I~~~d~~~~~~~~~~g~~-~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~ 248 (409)
T 3hrp_A 188 IGWEGTHTVYVYMKASGWAPTRIGQL-GSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGRFNVK 248 (409)
T ss_dssp EBSSTTCEEEEEEGGGTTCEEEEEEC-CTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEEEETT
T ss_pred EecCCCceEEEEEcCCCceeEEeeec-cchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEEEECC
Confidence 87643 699999876543 222111 1112367899999995599999653 4579999998
Q ss_pred CCceEEe----ecCCC--Ccc-eeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC---------------CC
Q 019290 190 KKNVTVM----YNGLS--FPN-GVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM---------------PR 247 (343)
Q Consensus 190 ~~~~~~~----~~~~~--~~~-~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------------~~ 247 (343)
++....+ ..+.. .|. +++++++++.||+++...++|++++.++.. ..+... -.
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~-----~~~~g~~~~~g~~dg~~~~~~~~ 323 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC-----EWFCGSATQKTVQDGLREEALFA 323 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE-----EEEEECTTCCSCBCEEGGGCBCS
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE-----EEEEeCCCCCCcCCCcccccEeC
Confidence 7765544 22222 234 999999778899999999999999987631 111110 12
Q ss_pred CCCceeeCCCCCEEEEec-cCCCccccccccccccccCCCcccCCCeEEEEC-CCCCEEEEeeCCCC----------Ccc
Q 019290 248 FPDNIKSDSKGEFWIAMN-SARGKIESNKKTAFCEETAKPWFLRDPVGVKFD-VNGNVVDVLDGNEG----------NTL 315 (343)
Q Consensus 248 ~p~~i~~d~~G~lwi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~g~~~~~~~~~~~----------~~~ 315 (343)
.|.++++|++|+||+++. . .+.|.+++ ++|+.......+.. ..+
T Consensus 324 ~P~gia~d~dG~lyvad~~~------------------------~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~ 379 (409)
T 3hrp_A 324 QPNGMTVDEDGNFYIVDGFK------------------------GYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATF 379 (409)
T ss_dssp SEEEEEECTTCCEEEEETTT------------------------TCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCB
T ss_pred CCeEEEEeCCCCEEEEeCCC------------------------CCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEe
Confidence 488999999999999987 6 45889999 67776555433111 124
Q ss_pred CCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 316 NSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 316 ~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
..+..+..+ +|+||++....++|.++.
T Consensus 380 ~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 380 NYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp SSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred CCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 556666666 699999999999999986
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=1.1e-18 Score=153.69 Aligned_cols=241 Identities=14% Similarity=0.171 Sum_probs=172.2
Q ss_pred cccccCC-CCCCCceEEEcCCCCeeEEEec-CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE
Q 019290 26 YQQLQLP-GVVGPESLAFDCNGEGPYVGVS-DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF 103 (343)
Q Consensus 26 ~~~~~~~-~~~~p~~l~~d~~g~~l~~~~~-~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (343)
++++++| ....|.+|++|++|+ +|++.. +++|+++|+. +.+..+... .....|.++++
T Consensus 5 ~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~-~~~~~~~~~------------------~~~~~~~~i~~ 64 (299)
T 2z2n_A 5 LQELNLTNQDTGPYGITVSDKGK-VWITQHKANMISCINLD-GKITEYPLP------------------TPDAKVMCLTI 64 (299)
T ss_dssp EEEEECCSSSCCEEEEEECTTSC-EEEEETTTTEEEEECTT-CCEEEEECS------------------STTCCEEEEEE
T ss_pred EEEEcCCCcCCCccceEECCCCC-EEEEecCCCcEEEEcCC-CCeEEecCC------------------cccCceeeEEE
Confidence 3455666 456899999999999 665554 7899999988 666655321 12246889999
Q ss_pred eCCCCeEEEEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCce
Q 019290 104 NPVTCDLYIADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 104 ~~~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
++ ++.+|+++.. .+|++++++ ++++.+... .....++++++++ +|++|+++.. .++
T Consensus 65 ~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~~~-~g~l~v~~~~-----------------~~~ 121 (299)
T 2z2n_A 65 SS-DGEVWFTENAANKIGRITKK-GIIKEYTLP---NPDSAPYGITEGP-NGDIWFTEMN-----------------GNR 121 (299)
T ss_dssp CT-TSCEEEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECT-TSCEEEEETT-----------------TTE
T ss_pred CC-CCCEEEeCCCCCeEEEECCC-CcEEEEeCC---CcCCCceeeEECC-CCCEEEEecC-----------------Cce
Confidence 98 8899999764 469999987 555544311 1235688999999 5999998764 467
Q ss_pred EEEEeCCCCceEEee--cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee--cCCCCCCceeeCCCC
Q 019290 183 LLKYDPLKKNVTVMY--NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA--EMPRFPDNIKSDSKG 258 (343)
Q Consensus 183 v~~~d~~~~~~~~~~--~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~p~~i~~d~~G 258 (343)
|+++|+ +++...+. .....+.++++++++ .+|+++...+.|++++..+ +...+. .....|.++++|++|
T Consensus 122 i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~i~~~~~g 194 (299)
T 2z2n_A 122 IGRITD-DGKIREYELPNKGSYPSFITLGSDN-ALWFTENQNNAIGRITESG-----DITEFKIPTPASGPVGITKGNDD 194 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTTC-----CEEEEECSSTTCCEEEEEECTTS
T ss_pred EEEECC-CCCEEEecCCCCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcCCC-----cEEEeeCCCCCCcceeEEECCCC
Confidence 999998 56655443 234568999999887 4888887788999999732 222221 112347789999999
Q ss_pred CEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCe
Q 019290 259 EFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPY 337 (343)
Q Consensus 259 ~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~ 337 (343)
++|+++.. .+.|.++|++++... +..+.. ...+..+..+ +|+||+++...+.
T Consensus 195 ~l~v~~~~------------------------~~~i~~~~~~g~~~~-~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~ 247 (299)
T 2z2n_A 195 ALWFVEII------------------------GNKIGRITTSGEITE-FKIPTP--NARPHAITAGAGIDLWFTEWGANK 247 (299)
T ss_dssp SEEEEETT------------------------TTEEEEECTTCCEEE-EECSST--TCCEEEEEECSTTCEEEEETTTTE
T ss_pred CEEEEccC------------------------CceEEEECCCCcEEE-EECCCC--CCCceeEEECCCCCEEEeccCCce
Confidence 99999865 348899999766543 433322 3445566555 7899999988899
Q ss_pred EEEEcC
Q 019290 338 VVVIKA 343 (343)
Q Consensus 338 i~~~~~ 343 (343)
|.++++
T Consensus 248 i~~~d~ 253 (299)
T 2z2n_A 248 IGRLTS 253 (299)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 999874
No 15
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=8.5e-19 Score=154.47 Aligned_cols=238 Identities=12% Similarity=0.126 Sum_probs=168.5
Q ss_pred cccCC-CCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 28 QLQLP-GVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 28 ~~~~~-~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
.+.++ ....|.+++++++|+++++...+++|+++|++ +++..+... .....|.++++++
T Consensus 54 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~------------------~~~~~~~~i~~~~- 113 (300)
T 2qc5_A 54 EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLP------------------QPDSGPYGITEGL- 113 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECS------------------STTCCEEEEEECS-
T ss_pred EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCC------------------CCCCCCccceECC-
Confidence 34455 44679999999999944444457899999988 555554311 1224688999998
Q ss_pred CCeEEEEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 107 TCDLYIADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 107 ~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
++++|+++.. .+|++++++ +++..+... .....++++++|+ +|++|+++.. .+.|++
T Consensus 114 ~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~d~-~g~l~v~~~~-----------------~~~i~~ 171 (300)
T 2qc5_A 114 NGDIWFTQLNGDRIGKLTAD-GTIYEYDLP---NKGSYPAFITLGS-DNALWFTENQ-----------------NNSIGR 171 (300)
T ss_dssp TTCEEEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECT-TSSEEEEETT-----------------TTEEEE
T ss_pred CCCEEEEccCCCeEEEECCC-CCEEEccCC---CCCCCceeEEECC-CCCEEEEecC-----------------CCeEEE
Confidence 8899999764 569999998 666544211 1235689999999 5999998864 467999
Q ss_pred EeCCCCceEEee--cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee-c-CCCCCCceeeCCCCCEE
Q 019290 186 YDPLKKNVTVMY--NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA-E-MPRFPDNIKSDSKGEFW 261 (343)
Q Consensus 186 ~d~~~~~~~~~~--~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~-~~~~p~~i~~d~~G~lw 261 (343)
+++ +++...+. .....+.++++++++ .+|+++...++|++++.++ ....+. . ....|.++++|++|++|
T Consensus 172 ~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~i~~d~~g~l~ 244 (300)
T 2qc5_A 172 ITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITTTG-----EISEYDIPTPNARPHAITAGKNSEIW 244 (300)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTTC-----CEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred ECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcCCC-----cEEEEECCCCCCCceEEEECCCCCEE
Confidence 998 46665443 234568899999887 4899988788999999743 222221 1 12347789999999999
Q ss_pred EEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEE
Q 019290 262 IAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVV 340 (343)
Q Consensus 262 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~ 340 (343)
+++.. .+.|.+++++++.. .+..+.+ ...+..+..+ +|+||+++. . .|.+
T Consensus 245 v~~~~------------------------~~~i~~~~~~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~-~-~i~~ 295 (300)
T 2qc5_A 245 FTEWG------------------------ANQIGRITNDNTIQ-EYQLQTE--NAEPHGITFGKDGSVWFALK-C-KIGK 295 (300)
T ss_dssp EEETT------------------------TTEEEEECTTSCEE-EEECCST--TCCCCCEEECTTSCEEEECS-S-EEEE
T ss_pred EeccC------------------------CCeEEEECCCCcEE-EEECCcc--CCccceeEeCCCCCEEEEcc-C-ceEE
Confidence 99965 35899999977654 3433322 2335555555 889999998 5 8998
Q ss_pred EcC
Q 019290 341 IKA 343 (343)
Q Consensus 341 ~~~ 343 (343)
+++
T Consensus 296 ~~p 298 (300)
T 2qc5_A 296 LNL 298 (300)
T ss_dssp EEE
T ss_pred eCC
Confidence 874
No 16
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.86 E-value=4e-19 Score=165.78 Aligned_cols=242 Identities=14% Similarity=0.136 Sum_probs=171.3
Q ss_pred CCCCCceEEEcCC---CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCe
Q 019290 33 GVVGPESLAFDCN---GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCD 109 (343)
Q Consensus 33 ~~~~p~~l~~d~~---g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~ 109 (343)
++..|.+|++|++ |+ ||+....++|+++++.++.+..+. .....|.++++++ +++
T Consensus 137 ~~~~P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~~~--------------------~~~~~P~giavd~-dG~ 194 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDIKT--------------------TNIGQCADVNFTL-NGD 194 (433)
T ss_dssp CCSCCCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEEEC--------------------CCCSCEEEEEECT-TCC
T ss_pred ccCCCceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEEee--------------------cCCCCccEEEECC-CCC
Confidence 5668999999984 66 554433389999999877766553 2345699999999 666
Q ss_pred EEEEeCC-----CeEEEEeCCCCeE--EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCce
Q 019290 110 LYIADAY-----FGLMVVGPNGGQA--QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 110 l~v~~~~-----~gi~~~d~~~~~~--~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
||+++.. .+++.++..++.. ..+. .+..|+++++|+.+|+||+++.. .++
T Consensus 195 lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~------~~~~P~giavd~~~G~lyv~d~~-----------------~~~ 251 (433)
T 4hw6_A 195 MVVVDDQSSDTNTGIYLFTRASGFTERLSLC------NARGAKTCAVHPQNGKIYYTRYH-----------------HAM 251 (433)
T ss_dssp EEEEECCSCTTSEEEEEECGGGTTCCEEEEE------ECSSBCCCEECTTTCCEEECBTT-----------------CSE
T ss_pred EEEEcCCCCcccceEEEEECCCCeecccccc------ccCCCCEEEEeCCCCeEEEEECC-----------------CCE
Confidence 9999863 3577777654321 1111 24678999999944999998865 568
Q ss_pred EEEEeCCCCce-EEeec--CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCc-cccccceeeecC-------------
Q 019290 183 LLKYDPLKKNV-TVMYN--GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGE-RTTYTPQLFAEM------------- 245 (343)
Q Consensus 183 v~~~d~~~~~~-~~~~~--~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~-~~~~~~~~~~~~------------- 245 (343)
|++++++++.. ..+.. ....+.+++++++++.||+++...++|+++++++. ..+.....++..
T Consensus 252 V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~ 331 (433)
T 4hw6_A 252 ISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTG 331 (433)
T ss_dssp EEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGG
T ss_pred EEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccc
Confidence 99999987776 33322 22335679999999999999999999999997642 111111122211
Q ss_pred --CCCCCceee---------CCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCC---
Q 019290 246 --PRFPDNIKS---------DSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNE--- 311 (343)
Q Consensus 246 --~~~p~~i~~---------d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~--- 311 (343)
-..|.++++ |++|+||+++.. .+.|.+++++|........+.
T Consensus 332 a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~------------------------n~~I~~~~~~G~v~t~~G~g~~~~ 387 (433)
T 4hw6_A 332 ARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD------------------------SHTVRVLTPEGRVTTYAGRGNSRE 387 (433)
T ss_dssp SBCSSEEEEEEEECGGGTTSSCCEEEEEEETT------------------------TTEEEEECTTSEEEEEECCCTTCS
T ss_pred eEEcCCccEEEEccccccccCCCCcEEEEECC------------------------CCEEEEECCCCCEEEEEeCCCCCc
Confidence 124778999 999999999987 568999999997666553321
Q ss_pred -----C-----CccCCceeEEEe--CCEEEEecCCCCeEEEEcC
Q 019290 312 -----G-----NTLNSVSEVQEY--GEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 312 -----~-----~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~ 343 (343)
+ ..+..+..+..+ +|+|||+...+++|.++++
T Consensus 388 ~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 388 WGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp SCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred cccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 1 124456566555 8999999999999999863
No 17
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.85 E-value=2.9e-18 Score=150.98 Aligned_cols=239 Identities=14% Similarity=0.165 Sum_probs=166.4
Q ss_pred ccccCC-CCCCCceEEEcCCCCeeEEE-ecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEe
Q 019290 27 QQLQLP-GVVGPESLAFDCNGEGPYVG-VSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFN 104 (343)
Q Consensus 27 ~~~~~~-~~~~p~~l~~d~~g~~l~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (343)
..+..+ ....|.+++++++|+ +|++ ..+++|++++++ +++..+.. ......|.+++++
T Consensus 48 ~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~------------------~~~~~~~~~i~~~ 107 (299)
T 2z2n_A 48 TEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKK-GIIKEYTL------------------PNPDSAPYGITEG 107 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEC------------------SSTTCCEEEEEEC
T ss_pred EEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCC-CcEEEEeC------------------CCcCCCceeeEEC
Confidence 334444 345799999999999 5554 447889999986 45554431 0123468899999
Q ss_pred CCCCeEEEEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceE
Q 019290 105 PVTCDLYIADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRL 183 (343)
Q Consensus 105 ~~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v 183 (343)
+ +++||+++.. .+|+++|+ +++...+.... ....++++++|+ +|++|+++.. .++|
T Consensus 108 ~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~---~~~~~~~i~~~~-~g~l~v~~~~-----------------~~~i 164 (299)
T 2z2n_A 108 P-NGDIWFTEMNGNRIGRITD-DGKIREYELPN---KGSYPSFITLGS-DNALWFTENQ-----------------NNAI 164 (299)
T ss_dssp T-TSCEEEEETTTTEEEEECT-TCCEEEEECSS---TTCCEEEEEECT-TSCEEEEETT-----------------TTEE
T ss_pred C-CCCEEEEecCCceEEEECC-CCCEEEecCCC---CCCCCceEEEcC-CCCEEEEeCC-----------------CCEE
Confidence 8 8899999754 56999999 56665442211 234688999999 5999998754 4679
Q ss_pred EEEeCCCCceEEe--ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee-c-CCCCCCceeeCCCCC
Q 019290 184 LKYDPLKKNVTVM--YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA-E-MPRFPDNIKSDSKGE 259 (343)
Q Consensus 184 ~~~d~~~~~~~~~--~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~-~~~~p~~i~~d~~G~ 259 (343)
+++|+ ++++..+ ......+.++++++++. +|+++...++|++++..+ ....+. . ....|.++++|++|+
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~i~~~~~g~ 237 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITTSG-----EITEFKIPTPNARPHAITAGAGID 237 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTTC-----CEEEEECSSTTCCEEEEEECSTTC
T ss_pred EEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECCCC-----cEEEEECCCCCCCceeEEECCCCC
Confidence 99998 6776554 22345688999998876 899987788999999732 222221 1 123578899999999
Q ss_pred EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEE
Q 019290 260 FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVV 339 (343)
Q Consensus 260 lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~ 339 (343)
+|+++.. .+.|.++|++++ +..+..+.+ ...+..+...+|+||+++. .+.+.
T Consensus 238 l~v~~~~------------------------~~~i~~~d~~g~-~~~~~~~~~--~~~~~~i~~~~g~l~v~~~-~~~l~ 289 (299)
T 2z2n_A 238 LWFTEWG------------------------ANKIGRLTSNNI-IEEYPIQIK--SAEPHGICFDGETIWFAME-CDKIG 289 (299)
T ss_dssp EEEEETT------------------------TTEEEEEETTTE-EEEEECSSS--SCCEEEEEECSSCEEEEET-TTEEE
T ss_pred EEEeccC------------------------CceEEEECCCCc-eEEEeCCCC--CCccceEEecCCCEEEEec-CCcEE
Confidence 9999865 358999999764 344443332 2234433337899999987 67888
Q ss_pred EEcC
Q 019290 340 VIKA 343 (343)
Q Consensus 340 ~~~~ 343 (343)
++++
T Consensus 290 ~~~~ 293 (299)
T 2z2n_A 290 KLTL 293 (299)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8863
No 18
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=2.2e-18 Score=160.77 Aligned_cols=243 Identities=14% Similarity=0.161 Sum_probs=171.8
Q ss_pred CCCCCceEEEcC--CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 33 GVVGPESLAFDC--NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 33 ~~~~p~~l~~d~--~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
++..|.+|++|+ +|+ +|+....++|.++|++++.+..+. .....|.+++++++++.|
T Consensus 135 ~~~~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~--------------------~~~~~P~~ia~d~~G~~l 193 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVY--------------------SGLSKVRTICWTHEADSM 193 (430)
T ss_dssp CCSCCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEE--------------------CCCSCEEEEEECTTSSEE
T ss_pred CCCCCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEe--------------------cCCCCcceEEEeCCCCEE
Confidence 567899999997 355 665544489999999887666553 234568999999944459
Q ss_pred EEEeCCC-----eEEEEeCCCCeE--EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceE
Q 019290 111 YIADAYF-----GLMVVGPNGGQA--QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRL 183 (343)
Q Consensus 111 ~v~~~~~-----gi~~~d~~~~~~--~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v 183 (343)
|+++... .++.++.++... ..+. ....++++++|+.+|.||+++.. .++|
T Consensus 194 yvad~~~~~~~~~v~~~~~~g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~-----------------~~~V 250 (430)
T 3tc9_A 194 IITNDQNNNDRPNNYILTRESGFKVITELT------KGQNCNGAETHPINGELYFNSWN-----------------AGQV 250 (430)
T ss_dssp EEEECCSCTTSEEEEEEEGGGTSCSEEEEE------ECSSCCCEEECTTTCCEEEEETT-----------------TTEE
T ss_pred EEEeCCCCcccceEEEEeCCCceeeeeeec------cCCCceEEEEeCCCCEEEEEECC-----------------CCEE
Confidence 9998632 467777654321 1221 23578999999944999999976 5789
Q ss_pred EEEeCCCCceEEee--cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCc-cccccceeeecC---------------
Q 019290 184 LKYDPLKKNVTVMY--NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGE-RTTYTPQLFAEM--------------- 245 (343)
Q Consensus 184 ~~~d~~~~~~~~~~--~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~-~~~~~~~~~~~~--------------- 245 (343)
++++++++....+. .....|++++++++++.||+++...++|++++.++. ..+.....++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~ 330 (430)
T 3tc9_A 251 FRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKAR 330 (430)
T ss_dssp EEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCB
T ss_pred EEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceE
Confidence 99999877653332 233569999999999999999999999999998753 111112222211
Q ss_pred CCCCC-ceee--------CCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCC------
Q 019290 246 PRFPD-NIKS--------DSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGN------ 310 (343)
Q Consensus 246 ~~~p~-~i~~--------d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~------ 310 (343)
-..|. ++++ |++|+||+++.. .+.|.+++++|+........
T Consensus 331 ~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~------------------------n~~I~~i~~~G~v~~~~g~g~~~~~G 386 (430)
T 3tc9_A 331 MHAPRQGTFVKNPAYKGSSDEYDFYFCDRE------------------------NHCIRILTPQGRVTTFAGRGSNGTSG 386 (430)
T ss_dssp BSSEEEEEEEECGGGTTSSCCEEEEEEEGG------------------------GTEEEEECTTSEEEEEEECCTTSSSS
T ss_pred eCCCcceEEEccccccccCCCCeEEEEECC------------------------CcEEEEECCCCcEEEEEeCCCCCCCc
Confidence 11366 6776 567999999987 46899999999776665431
Q ss_pred --CC-----CccCCceeEEEe--CCEEEEecCCCCeEEEEcC
Q 019290 311 --EG-----NTLNSVSEVQEY--GEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 311 --~~-----~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~~ 343 (343)
++ ..+..+..+..+ +|+|||+...+++|.++++
T Consensus 387 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 387 YNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred ccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 11 124456666665 5999999999999999863
No 19
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.83 E-value=4.7e-18 Score=153.90 Aligned_cols=244 Identities=15% Similarity=0.171 Sum_probs=162.4
Q ss_pred CCCceEEEcCCCCeeEEEe---cCC--EEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCe
Q 019290 35 VGPESLAFDCNGEGPYVGV---SDG--RILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCD 109 (343)
Q Consensus 35 ~~p~~l~~d~~g~~l~~~~---~~g--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~ 109 (343)
..|++++++++|+ +|++. .++ +|+.++ +++...|..... ........|+++++++ +++
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~-------------~~~~~~~~p~gv~~d~-~g~ 79 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELT--QDGLIPFPPQSG-------------NAIITFDTVLGIKSDG-NGI 79 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEE--TTEEEESCCCCS-------------SCCCCCSCEEEEEECS-SSE
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEEC--CCCeecCCCccc-------------CcccceeEeeEEEEcC-CCc
Confidence 4799999999999 55442 233 788888 444443321100 0013345799999998 799
Q ss_pred EEEEeCC------CeEEEEeCCCCeEEEccccc--CCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCc
Q 019290 110 LYIADAY------FGLMVVGPNGGQAQQLASSA--GGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSG 181 (343)
Q Consensus 110 l~v~~~~------~gi~~~d~~~~~~~~~~~~~--~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
||+++.. ..|+++|++++++....... ...+...++++++|+.++.+|+++.+.. ..+
T Consensus 80 L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--------------~~~ 145 (343)
T 2qe8_A 80 VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--------------DKA 145 (343)
T ss_dssp EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--------------GGC
T ss_pred EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--------------CCC
Confidence 9999865 46999999988854332221 1223356899999964489999987310 145
Q ss_pred eEEEEeCCCCceEEeecC------------------------------CCCcceeEEecCCCEEEEEEcCCCeEEEEEcc
Q 019290 182 RLLKYDPLKKNVTVMYNG------------------------------LSFPNGVALSNNNSFLLLAESATLKILRFWLQ 231 (343)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~------------------------------~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~ 231 (343)
.|+++|+++++..+.... ...++++++++|++.||+++....+|++++.+
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~ 225 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSA 225 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHH
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHH
Confidence 677777765554443211 02468999999999999999888899999854
Q ss_pred C--ccccccc------eeeecCCCCCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCC
Q 019290 232 G--ERTTYTP------QLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGN 302 (343)
Q Consensus 232 ~--~~~~~~~------~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~ 302 (343)
. +..+.+. ... ...+.|+++++|++|++|++... .+.|.++|+ +|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~------------------------~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 226 DLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLA------------------------HSAIGVITSADRA 280 (343)
T ss_dssp HHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGG------------------------GTEEEEEETTTTE
T ss_pred HhcCCCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccC------------------------CCeEEEEECCCCC
Confidence 1 1000111 111 12346999999999999999987 458999999 787
Q ss_pred EEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCe
Q 019290 303 VVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPY 337 (343)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~ 337 (343)
.......+ ....+..+..+ +|+||+++...++
T Consensus 281 ~~~~~~~~---~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 281 YKLLVTDE---KLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp EEEEEECG---GGSCEEEEEECTTSCEEEEECCGGG
T ss_pred EEEEEECC---ceecCCeeEECCCCcEEEEeCcccc
Confidence 65555433 24456666654 7899999875443
No 20
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.82 E-value=3.1e-18 Score=155.50 Aligned_cols=209 Identities=16% Similarity=0.165 Sum_probs=155.8
Q ss_pred CCCCCCceEEEcC-CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 32 PGVVGPESLAFDC-NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 32 ~~~~~p~~l~~d~-~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
+++..|.++++|+ ++.++|++..+++|++++++++....+.. .....|.|+++++.+++|
T Consensus 70 ~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------------------~~~~~p~glavd~~~g~l 130 (349)
T 3v64_C 70 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------------------TGLESPGGLAVDWVHDKL 130 (349)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------------------SSCSCCCEEEEETTTTEE
T ss_pred cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe-------------------CCCCCccEEEEecCCCeE
Confidence 4556799999996 46666788889999999998866554421 233468999999768899
Q ss_pred EEEeCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC
Q 019290 111 YIADAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL 189 (343)
Q Consensus 111 ~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 189 (343)
|+++... .|.++++++...+.+.. .....|+++++|+.+|.||+++... .++|++++++
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~----~~l~~P~~iavdp~~g~ly~td~~~----------------~~~I~r~~~d 190 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASSMD 190 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEC----TTCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETT
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEe----CCCCCcceEEEecCcCeEEEeccCC----------------CCEEEEEeCC
Confidence 9998764 59999998654443322 1235689999998568999998751 3689999988
Q ss_pred CCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEeccC
Q 019290 190 KKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAMNSA 267 (343)
Q Consensus 190 ~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~~~~ 267 (343)
+...+.+. .++..|++++++++++.|||+++..++|+++++++. ..+.+.. ....|++++++ +|++|++++.
T Consensus 191 G~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~----~~~~~~~~~~~~P~giav~-~~~ly~td~~- 264 (349)
T 3v64_C 191 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS----HRKAVISQGLPHPFAITVF-EDSLYWTDWH- 264 (349)
T ss_dssp SCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC----SCEEEECSSCSSEEEEEEE-TTEEEEEETT-
T ss_pred CCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC----ceEEEEeCCCCCceEEEEE-CCEEEEecCC-
Confidence 65555544 457789999999989999999999999999999873 3333332 23469999995 5789999987
Q ss_pred CCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEee
Q 019290 268 RGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLD 308 (343)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~ 308 (343)
.+.|.++++ +|+....+.
T Consensus 265 -----------------------~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 265 -----------------------TKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp -----------------------TTEEEEEETTTCCSCEEEE
T ss_pred -----------------------CCeEEEEEccCCCccEEec
Confidence 457888884 666544443
No 21
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=9.2e-18 Score=151.01 Aligned_cols=245 Identities=18% Similarity=0.228 Sum_probs=164.9
Q ss_pred CCCCCceEEEcCCCCeeEEEecC------------------------CEEEEEEcCCCCeEEeeecCCCccccccCCCCC
Q 019290 33 GVVGPESLAFDCNGEGPYVGVSD------------------------GRILKWKAANSGWTEFATTAPHRAREICDGSTN 88 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~~------------------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (343)
.+..|.+|+++++|++++++..+ +.|+++|+.++++.....
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--------------- 86 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG--------------- 86 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC---------------
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC---------------
Confidence 34469999999999944454444 369999998766543221
Q ss_pred cccCCCcCCeeeEEEeCCCCeEEEEeCCC-eEEEEeCCCC--eEEEccccc----CCCCccCcceeEEeCCCCeEEEEeC
Q 019290 89 TTLEPLCGRPLGIKFNPVTCDLYIADAYF-GLMVVGPNGG--QAQQLASSA----GGIPFRFTNDLDIDPNTGIVYFTDS 161 (343)
Q Consensus 89 ~~~~~~~~~p~gi~~~~~~~~l~v~~~~~-gi~~~d~~~~--~~~~~~~~~----~~~~~~~~~~i~~d~~dg~l~v~~~ 161 (343)
......|.++++++ +++||+++..+ .|+++++++. .+..+.... ....+..|+++++++.+|++|+++.
T Consensus 87 ---~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 87 ---KNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp ---TTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC
T ss_pred ---CCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC
Confidence 12345799999998 88899998764 4999998755 233332110 1223457999999983499999985
Q ss_pred -CcccccccceeeeeecCCCceEEEEeCCCCceEEeec----------CCCCcceeEEecCCCEEEEEEcCCCeEEEEEc
Q 019290 162 -SIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYN----------GLSFPNGVALSNNNSFLLLAESATLKILRFWL 230 (343)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~----------~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~ 230 (343)
. .++|.++++++.....+.. .+..|.+++++++++.+|+++..+++|.+|+.
T Consensus 163 ~~-----------------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~ 225 (329)
T 3fvz_A 163 YC-----------------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKT 225 (329)
T ss_dssp SS-----------------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CC-----------------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEEC
Confidence 4 4679999976433333321 23459999999997789999999999999998
Q ss_pred c-Cccccccceeeec--CCCCCC------ceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-C
Q 019290 231 Q-GERTTYTPQLFAE--MPRFPD------NIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-N 300 (343)
Q Consensus 231 ~-~~~~~~~~~~~~~--~~~~p~------~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~ 300 (343)
+ +.. ...+.. ....+. +++++.+|++|+++.. ...+..++. +
T Consensus 226 ~~G~~----~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~------------------------~~~v~~~~~~~ 277 (329)
T 3fvz_A 226 DTKEF----VREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQE------------------------PVQGFVMNFSS 277 (329)
T ss_dssp TTCCE----EEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSC------------------------CCCEEEEETTT
T ss_pred CCCcE----EEEEeccccCCCcceeeecCCEEEEeCCCEEeccCC------------------------CcEEEEEEcCC
Confidence 7 321 112211 111122 4455556666666544 347788884 6
Q ss_pred CCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 301 GNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
|+.+..+....+ ....+..+..+ +|+||++....++|.+++
T Consensus 278 g~~~~~~~~~~~-~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 278 GEIIDVFKPVRK-HFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp CCEEEEECCSSS-CCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred CeEEEEEcCCCC-ccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 888777652222 34556666655 789999999999999986
No 22
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.82 E-value=2.6e-17 Score=149.37 Aligned_cols=231 Identities=14% Similarity=0.165 Sum_probs=167.2
Q ss_pred ceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCC
Q 019290 38 ESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYF 117 (343)
Q Consensus 38 ~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~ 117 (343)
.+.+.++++. ++++ ....|.++++++.....+. .....|.++++++.++.||++|...
T Consensus 37 ~C~~~~~~~~-ll~~-~~~~I~~i~~~g~~~~~~~--------------------~~~~~~~~l~~d~~~~~ly~~D~~~ 94 (349)
T 3v64_C 37 SCKALGPEPV-LLFA-NRIDIRQVLPHRSEYTLLL--------------------NNLENAIALDFHHRRELVFWSDVTL 94 (349)
T ss_dssp CEEESSSCCE-EEEE-CBSCEEEECTTSCCEEEEE--------------------CSCSCEEEEEEETTTTEEEEEETTT
T ss_pred cccccccCce-eEee-cccceEEEeCCCCeeEEee--------------------cCCCceEEEEEeccccEEEEEeccC
Confidence 4555566554 4444 3456999998876655442 2344689999997689999998764
Q ss_pred -eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEe
Q 019290 118 -GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVM 196 (343)
Q Consensus 118 -gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 196 (343)
.|++++++++..+.+... ....+.++++|+.+++||+++.. .+.|.+++.++...+.+
T Consensus 95 ~~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 95 DRILRANLNGSNVEEVVST----GLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVL 153 (349)
T ss_dssp TEEEEEETTSCSCEEEECS----SCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEE
T ss_pred CceEEEecCCCCceEEEeC----CCCCccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceEEE
Confidence 499999987765544321 12468899999755899999876 56899999886554444
Q ss_pred e-cCCCCcceeEEecCCCEEEEEEcCC-CeEEEEEccCccccccceeeec-CCCCCCceeeCC-CCCEEEEeccCCCccc
Q 019290 197 Y-NGLSFPNGVALSNNNSFLLLAESAT-LKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDS-KGEFWIAMNSARGKIE 272 (343)
Q Consensus 197 ~-~~~~~~~~i~~~~d~~~lyv~~~~~-~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~-~G~lwi~~~~~~~~~~ 272 (343)
. ..+..|+++++++.++.|||++... ++|+++++++. ..+.+.. .-..|+++++|+ +++||+++..
T Consensus 154 ~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~----~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~------ 223 (349)
T 3v64_C 154 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS----GRRIIADTHLFWPNGLTIDYAGRRMYWVDAK------ 223 (349)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----SCEESCCSSCSCEEEEEEETTTTEEEEEETT------
T ss_pred EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC----CcEEEEECCCCCcceEEEeCCCCEEEEEECC------
Confidence 4 4678899999999888999999887 99999999873 3333332 223599999996 6789999887
Q ss_pred cccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 273 SNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|.+++.+|.....+... + ...+..+..++++||++.+..++|.+++
T Consensus 224 ------------------~~~I~~~~~dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 224 ------------------HHVIERANLDGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp ------------------TTEEEEEETTSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ------------------CCEEEEEeCCCCceEEEEeC-C--CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 45889999887643333211 1 2344455447899999999999999986
No 23
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.82 E-value=3.8e-18 Score=157.04 Aligned_cols=209 Identities=16% Similarity=0.168 Sum_probs=156.0
Q ss_pred CCCCCCceEEEcC-CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 32 PGVVGPESLAFDC-NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 32 ~~~~~p~~l~~d~-~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
+++..|.++++|+ ++.++|++..+++|++++++++....+.. .....|.|+++++.+++|
T Consensus 113 ~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------------------~~~~~p~glavd~~~g~l 173 (386)
T 3v65_B 113 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------------------TGLESPGGLAVDWVHDKL 173 (386)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-------------------SSCSCCCCEEEETTTTEE
T ss_pred cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-------------------CCCCCccEEEEEeCCCeE
Confidence 3556799999996 46667788899999999998876554421 233468899999768999
Q ss_pred EEEeCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC
Q 019290 111 YIADAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL 189 (343)
Q Consensus 111 ~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 189 (343)
|+++... .|.++++++...+.+.. ..+..|+++++|+.+|.||+++... .+.|++++++
T Consensus 174 Y~~d~~~~~I~~~~~dg~~~~~l~~----~~l~~P~giavdp~~g~ly~td~~~----------------~~~I~r~~~d 233 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASSMD 233 (386)
T ss_dssp EEEETTTTEEEECBTTSCSCEEEEC----SSCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETT
T ss_pred EEEcCCCCeEEEEeCCCCceEEeec----CCCCCCcEEEEEcCCCeEEEeccCC----------------CCEEEEEeCC
Confidence 9998764 59999988654444322 1235689999997568999998751 3689999988
Q ss_pred CCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEeccC
Q 019290 190 KKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAMNSA 267 (343)
Q Consensus 190 ~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~~~~ 267 (343)
+...+.+. .++..|++++++++++.|||+++..++|+++++++. ..+.+.. ..+.|++++++ ++.+|++++.
T Consensus 234 G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~----~~~~~~~~~~~~P~giav~-~~~ly~td~~- 307 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS----HRKAVISQGLPHPFAITVF-EDSLYWTDWH- 307 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC----SCEEEECSSCSSEEEEEEE-TTEEEEEETT-
T ss_pred CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC----eeEEEEECCCCCceEEEEE-CCEEEEeeCC-
Confidence 65555444 457789999999988999999999999999998872 3333332 33469999995 5679999887
Q ss_pred CCccccccccccccccCCCcccCCCeEEEEC-CCCCEEEEee
Q 019290 268 RGKIESNKKTAFCEETAKPWFLRDPVGVKFD-VNGNVVDVLD 308 (343)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~g~~~~~~~ 308 (343)
.+.|.+++ .+|+....+.
T Consensus 308 -----------------------~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 308 -----------------------TKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp -----------------------TTEEEEEETTTCCSCEEEE
T ss_pred -----------------------CCeEEEEECCCCcceEEEc
Confidence 45888998 4676555544
No 24
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.81 E-value=1.8e-17 Score=144.57 Aligned_cols=207 Identities=17% Similarity=0.202 Sum_probs=151.7
Q ss_pred CCCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 35 VGPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 35 ~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
..|+++++|++ ++++|++..+++|++++++++....+. ......|.++++++.++.||++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-------------------~~~~~~p~~ia~d~~~~~lyv~ 96 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-------------------RQDLGSPEGIALDHLGRTIFWT 96 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-------------------CTTCCCEEEEEEETTTTEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE-------------------ECCCCCccEEEEEecCCeEEEE
Confidence 36899999986 455557777899999999876544332 1223578999999867899999
Q ss_pred eCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 114 DAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 114 ~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
+... .|.+++.++...+.+... ....|+++++|+.+++||+++... ..+.|++++.++..
T Consensus 97 d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~i~vd~~~g~lyv~~~~~---------------~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 97 DSQLDRIEVAKMDGTQRRVLFDT----GLVNPRGIVTDPVRGNLYWTDWNR---------------DNPKIETSHMDGTN 157 (267)
T ss_dssp ETTTTEEEEEETTSCSCEEEECS----SCSSEEEEEEETTTTEEEEEECCS---------------SSCEEEEEETTSCC
T ss_pred ECCCCEEEEEEcCCCCEEEEEEC----CCCCccEEEEeeCCCEEEEEECCC---------------CCcEEEEEecCCCC
Confidence 8764 599999875443333221 135689999998448999988541 13579999887544
Q ss_pred eEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcc
Q 019290 193 VTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKI 271 (343)
Q Consensus 193 ~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~ 271 (343)
.+.+. ..+..|++++++++++.|||++...++|+++++++. ....+......|.+++.| ++++|+++..
T Consensus 158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~----~~~~~~~~~~~P~gi~~d-~~~lyva~~~----- 227 (267)
T 1npe_A 158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP----GRRKVLEGLQYPFAVTSY-GKNLYYTDWK----- 227 (267)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE----EEEEEEECCCSEEEEEEE-TTEEEEEETT-----
T ss_pred cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC----ceEEEecCCCCceEEEEe-CCEEEEEECC-----
Confidence 44443 456789999999999999999999999999998762 222333333468999998 6889999887
Q ss_pred ccccccccccccCCCcccCCCeEEEECCC-CCEEEEee
Q 019290 272 ESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLD 308 (343)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~ 308 (343)
.+.|.++|++ |+.+..+.
T Consensus 228 -------------------~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 228 -------------------TNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp -------------------TTEEEEEETTTTEEEEEEC
T ss_pred -------------------CCeEEEEeCCCCCceEEEc
Confidence 4589999985 77777665
No 25
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.81 E-value=1.4e-17 Score=149.10 Aligned_cols=192 Identities=15% Similarity=0.187 Sum_probs=140.7
Q ss_pred CCCCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCC----CCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC
Q 019290 31 LPGVVGPESLAFDCN-GEGPYVGVSDGRILKWKAAN----SGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP 105 (343)
Q Consensus 31 ~~~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (343)
++.+..|+++++|++ +.++|++..+++|+++++++ .....+. ......|.|+++++
T Consensus 26 ~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-------------------~~~~~~p~glavd~ 86 (316)
T 1ijq_A 26 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------------------SRDIQAPDGLAVDW 86 (316)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-------------------CSSCSCCCEEEEET
T ss_pred hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-------------------eCCCCCcCEEEEee
Confidence 355678999999986 56667888889999999876 2222221 12234689999997
Q ss_pred CCCeEEEEeCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEE
Q 019290 106 VTCDLYIADAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLL 184 (343)
Q Consensus 106 ~~~~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 184 (343)
.+++||+++... .|.++++++...+.+... ....|+++++|+.+|.||+++... .++|+
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~----~~~~P~~iavdp~~g~ly~~d~~~----------------~~~I~ 146 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIK 146 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECSS----------------SCEEE
T ss_pred cCCeEEEEECCCCEEEEEeCCCCceEEEEEC----CCCCcceEEeCCCCCEEEEEccCC----------------CCeEE
Confidence 578999998764 599999986655544321 235689999997568999988641 36899
Q ss_pred EEeCCCCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC---CCCCCceeeCCCCCE
Q 019290 185 KYDPLKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM---PRFPDNIKSDSKGEF 260 (343)
Q Consensus 185 ~~d~~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~p~~i~~d~~G~l 260 (343)
++++++...+.+. ..+..|++++++++++.|||+++..++|+++++++ ...+.+... ...|.++++|. |++
T Consensus 147 ~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg----~~~~~~~~~~~~~~~P~giav~~-~~l 221 (316)
T 1ijq_A 147 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG----GNRKTILEDEKRLAHPFSLAVFE-DKV 221 (316)
T ss_dssp EEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS----CSCEEEEECTTTTSSEEEEEEET-TEE
T ss_pred EEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC----CceEEEeecCCccCCcEEEEEEC-CEE
Confidence 9998755544443 45778999999999999999999999999999987 333444331 24689999984 789
Q ss_pred EEEecc
Q 019290 261 WIAMNS 266 (343)
Q Consensus 261 wi~~~~ 266 (343)
|++++.
T Consensus 222 y~~d~~ 227 (316)
T 1ijq_A 222 FWTDII 227 (316)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999987
No 26
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.80 E-value=8e-17 Score=148.17 Aligned_cols=230 Identities=14% Similarity=0.167 Sum_probs=166.3
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCe
Q 019290 39 SLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFG 118 (343)
Q Consensus 39 ~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~g 118 (343)
+.+.++++. ++++ ....|.++++.++....+. .....|.++++++.++.||+++...+
T Consensus 81 C~~~~~~~~-l~~~-~~~~I~~i~~~~~~~~~~~--------------------~~~~~~~gl~~d~~~~~ly~~D~~~~ 138 (386)
T 3v65_B 81 CKALGPEPV-LLFA-NRIDIRQVLPHRSEYTLLL--------------------NNLENAIALDFHHRRELVFWSDVTLD 138 (386)
T ss_dssp EEECSSCCE-EEEE-CBSCEEEECTTSCCCEEEE--------------------CSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ECCccccce-eEee-cCccceeeccCCCcEEEEe--------------------cCCCccEEEEEecCCCeEEEEeCCCC
Confidence 444455444 3433 3456999998876655443 23456899999976899999987654
Q ss_pred -EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee
Q 019290 119 -LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY 197 (343)
Q Consensus 119 -i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 197 (343)
|++++++++..+.+... ....+.++++|+.+++||+++.. ..+|.++++++...+.+.
T Consensus 139 ~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~ 197 (386)
T 3v65_B 139 RILRANLNGSNVEEVVST----GLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLL 197 (386)
T ss_dssp EEEEEETTSCCEEEEECS----SCSCCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEEE
T ss_pred cEEEEecCCCCcEEEEeC----CCCCccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEee
Confidence 99999987766554321 12468999999755899999876 567999998765544443
Q ss_pred -cCCCCcceeEEecCCCEEEEEEcCC-CeEEEEEccCccccccceeeec-CCCCCCceeeCC-CCCEEEEeccCCCcccc
Q 019290 198 -NGLSFPNGVALSNNNSFLLLAESAT-LKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDS-KGEFWIAMNSARGKIES 273 (343)
Q Consensus 198 -~~~~~~~~i~~~~d~~~lyv~~~~~-~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~-~G~lwi~~~~~~~~~~~ 273 (343)
..+..|+++++++.++.|||++... ++|+++++++. ..+.+.. .-..|.++++|+ +++||+++..
T Consensus 198 ~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~----~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~------- 266 (386)
T 3v65_B 198 WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS----GRRIIADTHLFWPNGLTIDYAGRRMYWVDAK------- 266 (386)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----SCEEEECSSCSCEEEEEEEGGGTEEEEEETT-------
T ss_pred cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC----CcEEEEECCCCCeeeEEEeCCCCEEEEEECC-------
Confidence 4568899999999889999999887 89999998873 3333332 223599999995 6799999876
Q ss_pred ccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 274 NKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|.+++.+|.....+... + ...+..+..++++||++.+..++|.+++
T Consensus 267 -----------------~~~I~~~d~dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 267 -----------------HHVIERANLDGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp -----------------TTEEEEECTTSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -----------------CCEEEEEeCCCCeeEEEEEC-C--CCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 45889999887643333221 1 2344555558899999999999999986
No 27
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.80 E-value=1.1e-16 Score=143.33 Aligned_cols=224 Identities=15% Similarity=0.167 Sum_probs=157.4
Q ss_pred eEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCC-eEEEEeCCC-
Q 019290 49 PYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYF-GLMVVGPNG- 126 (343)
Q Consensus 49 l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~-gi~~~d~~~- 126 (343)
|+++. ...|.++|.++.+...+. .....|.++++++.++.||+++... .|+++++++
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~--------------------~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~ 62 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLI--------------------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRA 62 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEE--------------------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---
T ss_pred EEEEC-CCeEEEEECCCcceEehh--------------------cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCC
Confidence 34433 345899998876654432 2345789999998678999998764 499999886
Q ss_pred ---CeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee-cCCCC
Q 019290 127 ---GQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY-NGLSF 202 (343)
Q Consensus 127 ---~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~ 202 (343)
...+.+.. .....+.++++|+.+++||+++.. .+.|.++++++...+.+. ..+..
T Consensus 63 ~~~~~~~~~~~----~~~~~p~glavd~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~ 121 (316)
T 1ijq_A 63 HGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSK 121 (316)
T ss_dssp -----CEEEEC----SSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCC
T ss_pred CCCcccEEEEe----CCCCCcCEEEEeecCCeEEEEECC-----------------CCEEEEEeCCCCceEEEEECCCCC
Confidence 22222211 123568999999645899999875 568999998865555544 36778
Q ss_pred cceeEEecCCCEEEEEEcCC-CeEEEEEccCccccccceeeec-CCCCCCceeeCC-CCCEEEEeccCCCcccccccccc
Q 019290 203 PNGVALSNNNSFLLLAESAT-LKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDS-KGEFWIAMNSARGKIESNKKTAF 279 (343)
Q Consensus 203 ~~~i~~~~d~~~lyv~~~~~-~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~-~G~lwi~~~~~~~~~~~~~~~~~ 279 (343)
|++++++++++.|||++... ++|+++++++. ..+.+.. .-..|.++++|+ +++||+++..
T Consensus 122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~----~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~------------- 184 (316)
T 1ijq_A 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV----DIYSLVTENIQWPNGITLDLLSGRLYWVDSK------------- 184 (316)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSC----CEEEEECSSCSCEEEEEEETTTTEEEEEETT-------------
T ss_pred cceEEeCCCCCEEEEEccCCCCeEEEEcCCCC----CeEEEEECCCCCceEEEEeccCCEEEEEECC-------------
Confidence 99999999888999999765 89999998873 3333332 224699999997 4689999876
Q ss_pred ccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEcC
Q 019290 280 CEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 280 ~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 343 (343)
.+.|.++|.+|+....+..... ....+..+..++++||++....++|.++++
T Consensus 185 -----------~~~I~~~d~dg~~~~~~~~~~~-~~~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 185 -----------LHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp -----------TTEEEEEETTSCSCEEEEECTT-TTSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred -----------CCeEEEEecCCCceEEEeecCC-ccCCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 4588999998764444322111 123445555578999999999999999863
No 28
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.80 E-value=3.6e-17 Score=159.11 Aligned_cols=196 Identities=18% Similarity=0.158 Sum_probs=152.4
Q ss_pred ccccCCCCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC
Q 019290 27 QQLQLPGVVGPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP 105 (343)
Q Consensus 27 ~~~~~~~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (343)
..++++++..|.+|++|++ +.++|++..+++|+++++++.....+.. .....|.||+++.
T Consensus 29 ~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~-------------------~g~~~P~GlAvD~ 89 (628)
T 4a0p_A 29 VAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE-------------------FGLDYPEGMAVDW 89 (628)
T ss_dssp EECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------------------SSCSCCCEEEEET
T ss_pred eEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe-------------------CCCCCcceEEEEe
Confidence 3445667778999999985 5666688889999999998765554421 2234689999998
Q ss_pred CCCeEEEEeCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEE
Q 019290 106 VTCDLYIADAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLL 184 (343)
Q Consensus 106 ~~~~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 184 (343)
..++||+++... .|.++++++...+.+.. ..+..|++|++||.+|.||+++.+. ..+|+
T Consensus 90 ~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g~----------------~~~I~ 149 (628)
T 4a0p_A 90 LGKNLYWADTGTNRIEVSKLDGQHRQVLVW----KDLDSPRALALDPAEGFMYWTEWGG----------------KPKID 149 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSTTCEEEEC----SSCCCEEEEEEETTTTEEEEEECSS----------------SCEEE
T ss_pred CCCEEEEEECCCCEEEEEecCCCcEEEEEe----CCCCCcccEEEccCCCeEEEeCCCC----------------CCEEE
Confidence 688999998765 49999998655444432 1235689999998569999998641 46899
Q ss_pred EEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEe
Q 019290 185 KYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAM 264 (343)
Q Consensus 185 ~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~ 264 (343)
+.++++...+.+...+..|+|++++++++.|||++...+.|+++++++. ..+++...-..|.+++++. +++|+++
T Consensus 150 r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~----~~~v~~~~l~~P~glav~~-~~ly~tD 224 (628)
T 4a0p_A 150 RAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL----NREVIADDLPHPFGLTQYQ-DYIYWTD 224 (628)
T ss_dssp EEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC----SCEEEEECCSCEEEEEEET-TEEEEEE
T ss_pred EEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC----ceEEeeccCCCceEEEEEC-CEEEEec
Confidence 9999877777777788899999999999999999999999999999873 3344444334689999986 7899999
Q ss_pred cc
Q 019290 265 NS 266 (343)
Q Consensus 265 ~~ 266 (343)
+.
T Consensus 225 ~~ 226 (628)
T 4a0p_A 225 WS 226 (628)
T ss_dssp TT
T ss_pred CC
Confidence 86
No 29
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.79 E-value=9.3e-17 Score=140.00 Aligned_cols=229 Identities=15% Similarity=0.180 Sum_probs=157.8
Q ss_pred CeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCC-eEEEEeCC
Q 019290 47 EGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYF-GLMVVGPN 125 (343)
Q Consensus 47 ~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~-gi~~~d~~ 125 (343)
..||++. .++|++++.+++....+... .........|++++++++++.||+++... .|++++++
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~~~~~--------------~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~ 66 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKKTEAK--------------AFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLH 66 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCE--------------EEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred cEEEEEc-CCeEEEEEecCcccccccce--------------eeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecC
Confidence 3455544 35899999877543210000 00001123578999998678999998765 49999998
Q ss_pred CCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee-cCCCCcc
Q 019290 126 GGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY-NGLSFPN 204 (343)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~ 204 (343)
++....+... ....++++++|+.++.+|+++.. .+.|++++.++...+.+. .++..|+
T Consensus 67 g~~~~~~~~~----~~~~p~~ia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~ 125 (267)
T 1npe_A 67 GGEPTTIIRQ----DLGSPEGIALDHLGRTIFWTDSQ-----------------LDRIEVAKMDGTQRRVLFDTGLVNPR 125 (267)
T ss_dssp SCCCEEEECT----TCCCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CCCcEEEEEC----CCCCccEEEEEecCCeEEEEECC-----------------CCEEEEEEcCCCCEEEEEECCCCCcc
Confidence 7655443221 23568999999844799999875 568999998755444443 3457899
Q ss_pred eeEEecCCCEEEEEEcC--CCeEEEEEccCccccccceeeec-CCCCCCceeeCCC-CCEEEEeccCCCccccccccccc
Q 019290 205 GVALSNNNSFLLLAESA--TLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSK-GEFWIAMNSARGKIESNKKTAFC 280 (343)
Q Consensus 205 ~i~~~~d~~~lyv~~~~--~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~-G~lwi~~~~~~~~~~~~~~~~~~ 280 (343)
+++++++++.|||++.. .++|+++++++. ..+.+.. ....|.++++|++ ++||+++..
T Consensus 126 ~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~----~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~-------------- 187 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNRDNPKIETSHMDGT----NRRILAQDNLGLPNGLTFDAFSSQLCWVDAG-------------- 187 (267)
T ss_dssp EEEEETTTTEEEEEECCSSSCEEEEEETTSC----CCEEEECTTCSCEEEEEEETTTTEEEEEETT--------------
T ss_pred EEEEeeCCCEEEEEECCCCCcEEEEEecCCC----CcEEEEECCCCCCcEEEEcCCCCEEEEEECC--------------
Confidence 99999988899999876 579999998763 2233322 2235999999996 589999877
Q ss_pred cccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEcC
Q 019290 281 EETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 281 ~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 343 (343)
.+.|.++++++.....+.. + ...+..+..++++||++...+++|.++++
T Consensus 188 ----------~~~I~~~~~~g~~~~~~~~--~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 188 ----------THRAECLNPAQPGRRKVLE--G--LQYPFAVTSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp ----------TTEEEEEETTEEEEEEEEE--C--CCSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ----------CCEEEEEecCCCceEEEec--C--CCCceEEEEeCCEEEEEECCCCeEEEEeC
Confidence 4588999998754433321 1 12344555678999999999999999874
No 30
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.78 E-value=2.1e-17 Score=147.95 Aligned_cols=208 Identities=16% Similarity=0.159 Sum_probs=152.6
Q ss_pred CCCCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCe--EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCC
Q 019290 31 LPGVVGPESLAFDCN-GEGPYVGVSDGRILKWKAANSGW--TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVT 107 (343)
Q Consensus 31 ~~~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~ 107 (343)
++++..|..|.+++. +.++|++..+++|++++++++.. ..+. .....|.|+++++.+
T Consensus 31 ~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~--------------------~~l~~p~glavd~~~ 90 (318)
T 3sov_A 31 VGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV--------------------SGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE--------------------ECCSCCCEEEEETTT
T ss_pred ecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc--------------------CCCCCccEEEEEcCC
Confidence 335557889999985 66777889999999999887532 1111 223468899999768
Q ss_pred CeEEEEeCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEE
Q 019290 108 CDLYIADAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKY 186 (343)
Q Consensus 108 ~~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (343)
++||+++... .|.++++++...+.+.. .....|+++++|+.+|.||+++... .++|+++
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~----~~~~~P~giavdp~~g~ly~td~~~----------------~~~I~r~ 150 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWGE----------------VPKIERA 150 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEC----SSCSSEEEEEEEGGGTEEEEEECSS----------------SCEEEEE
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEe----CCCCCccEEEEeCCCCEEEEEecCC----------------CCEEEEE
Confidence 8999998764 59999998654444422 1235689999997558999998541 4679999
Q ss_pred eCCCCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEe
Q 019290 187 DPLKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAM 264 (343)
Q Consensus 187 d~~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~ 264 (343)
++++...+.+. .++..|++++++++++.|||+++..++|+++++++ ...+.+.. ....|.++++|. +.+|+++
T Consensus 151 ~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG----~~~~~~~~~~~~~P~glav~~-~~lywtd 225 (318)
T 3sov_A 151 GMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG----TNRQAVVKGSLPHPFALTLFE-DILYWTD 225 (318)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS----CSCEEEECSCCSCEEEEEEET-TEEEEEE
T ss_pred EcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC----CceEEEecCCCCCceEEEEeC-CEEEEEe
Confidence 98855554443 56788999999998999999999999999999987 33344443 334699999985 4688888
Q ss_pred ccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEe
Q 019290 265 NSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVL 307 (343)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~ 307 (343)
+. .+.|.++++ +|+....+
T Consensus 226 ~~------------------------~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 226 WS------------------------THSILACNKYTGEGLREI 245 (318)
T ss_dssp TT------------------------TTEEEEEETTTCCSCEEE
T ss_pred cC------------------------CCeEEEEECCCCCceEEE
Confidence 76 457888887 56644443
No 31
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.78 E-value=1.4e-16 Score=159.85 Aligned_cols=239 Identities=13% Similarity=0.173 Sum_probs=167.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCe-EEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCD-LYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~-l~v~~ 114 (343)
...+++.|++|+ +|+++.+++|+++++.++.+..+........ .......+.+++.++ +++ ||+++
T Consensus 358 ~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~v~~i~~d~-~g~~lWigt 424 (795)
T 4a2l_A 358 VVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESA-----------RGIGSNNIKAVYVDE-KKSLVYIGT 424 (795)
T ss_dssp SEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC-----------------CCSCSCEEEEEEET-TTTEEEEEE
T ss_pred eeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcc-----------cCCCCccEEEEEEcC-CCCEEEEEe
Confidence 367899999999 9999999899999999888877743110000 000123467888887 788 99997
Q ss_pred CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 115 AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
...||+++|+++++++.+.......+...+..++.|+ +|+||+++. .+|+++|+++++++
T Consensus 425 ~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~-------------------~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 425 HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTL-------------------SALVRFNPEQRSFT 484 (795)
T ss_dssp TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEES-------------------SCEEEEETTTTEEE
T ss_pred CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEec-------------------CceeEEeCCCCeEE
Confidence 6689999999998887764322222335678899999 599999763 36999999888776
Q ss_pred EeecC-----C--CCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee---cCCCC----CCceeeCCCCCE
Q 019290 195 VMYNG-----L--SFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA---EMPRF----PDNIKSDSKGEF 260 (343)
Q Consensus 195 ~~~~~-----~--~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~----p~~i~~d~~G~l 260 (343)
.+... + .....++.++++. +|++.. ++|++++..+. .. .+. ...++ ...++.|++|+|
T Consensus 485 ~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~----~~-~~~~~~~~~~l~~~~i~~i~~d~~g~l 556 (795)
T 4a2l_A 485 TIEKEKDGTPVVSKQITTLFRDSHKR-LWIGGE--EGLSVFKQEGL----DI-QKASILPVSNVTKLFTNCIYEASNGII 556 (795)
T ss_dssp ECCBCTTCCBCCCCCEEEEEECTTCC-EEEEES--SCEEEEEEETT----EE-EECCCSCSCGGGGSCEEEEEECTTSCE
T ss_pred EccccccccccCCceEEEEEECCCCC-EEEEeC--CceEEEeCCCC----eE-EEecCCCCCCCCCCeeEEEEECCCCCE
Confidence 65422 1 2345677777665 777654 67999997652 22 221 11122 334678999999
Q ss_pred EEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEE
Q 019290 261 WIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVV 339 (343)
Q Consensus 261 wi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~ 339 (343)
|+++.. +++++|++...+..+...++.....+..+.++ +|+||+++. +-+.
T Consensus 557 WigT~~--------------------------Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~--~Gl~ 608 (795)
T 4a2l_A 557 WVGTRE--------------------------GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN--RGIS 608 (795)
T ss_dssp EEEESS--------------------------CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET--TEEE
T ss_pred EEEeCC--------------------------CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC--CceE
Confidence 999976 89999998877777765555555567777777 899999995 4577
Q ss_pred EEcC
Q 019290 340 VIKA 343 (343)
Q Consensus 340 ~~~~ 343 (343)
++++
T Consensus 609 ~~~~ 612 (795)
T 4a2l_A 609 CFNP 612 (795)
T ss_dssp EEET
T ss_pred EEcC
Confidence 7764
No 32
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.77 E-value=2.8e-16 Score=145.15 Aligned_cols=219 Identities=15% Similarity=0.170 Sum_probs=158.1
Q ss_pred cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCC-eEEEEeCCCC----e
Q 019290 54 SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYF-GLMVVGPNGG----Q 128 (343)
Q Consensus 54 ~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~-gi~~~d~~~~----~ 128 (343)
....|.+++.++.....+. .....|.++++++.++.||++|... .|+++++++. .
T Consensus 90 ~~~~I~~i~l~~~~~~~~~--------------------~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~ 149 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLI--------------------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS 149 (400)
T ss_dssp ETTEEEEECTTSCSCEEEE--------------------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CC
T ss_pred ccceeEEEccCCcceeEec--------------------cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCc
Confidence 4578999998876655442 3345689999998788999998764 4999998752 2
Q ss_pred EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee-cCCCCcceeE
Q 019290 129 AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY-NGLSFPNGVA 207 (343)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~i~ 207 (343)
.+.+.. .....+.++++|+.+++||+++.. .+.|.++++++...+.+. ..+..|++++
T Consensus 150 ~~~~~~----~~~~~p~glavD~~~~~lY~~d~~-----------------~~~I~~~~~~g~~~~~l~~~~~~~P~~ia 208 (400)
T 3p5b_L 150 YDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIV 208 (400)
T ss_dssp CEEEEC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEECTTTCSEEEEEECSSCCEEEEE
T ss_pred ceEEEe----CCCCCcccEEEEecCCceEEEECC-----------------CCeEEEEeCCCCceEEEEeCCCCCcceEE
Confidence 222221 123568999999745899999976 568999999866655544 4677899999
Q ss_pred EecCCCEEEEEEcC-CCeEEEEEccCccccccceeeec-CCCCCCceeeCC-CCCEEEEeccCCCccccccccccccccC
Q 019290 208 LSNNNSFLLLAESA-TLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDS-KGEFWIAMNSARGKIESNKKTAFCEETA 284 (343)
Q Consensus 208 ~~~d~~~lyv~~~~-~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~-~G~lwi~~~~~~~~~~~~~~~~~~~~~~ 284 (343)
+++.++.|||++.. .++|+++++++. ..+.+.. .-..|.+|++|+ +++||+++..
T Consensus 209 vdp~~g~ly~td~~~~~~I~~~~~dG~----~~~~~~~~~l~~P~glavd~~~~~lY~aD~~------------------ 266 (400)
T 3p5b_L 209 VDPVHGFMYWTDWGTPAKIKKGGLNGV----DIYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------ 266 (400)
T ss_dssp EETTTTEEEEEECSSSCCEEEEETTSC----SCEEEECSSCSCEEEEEEETTTTEEEEEETT------------------
T ss_pred EecccCeEEEEeCCCCCEEEEEeCCCC----ccEEEEECCCCceEEEEEEeCCCEEEEEECC------------------
Confidence 99988899999875 489999999873 3333332 224699999996 5789999876
Q ss_pred CCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 285 KPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 285 ~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|.++|.+|.....+....+ ....+..+..++++||++.+..++|.+++
T Consensus 267 ------~~~I~~~d~dG~~~~~~~~~~~-~l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 267 ------LHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp ------TTEEEEEETTSCCCEEEEECSS-TTSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred ------CCEEEEEeCCCCccEEEEeCCC-CCCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 4588999988765444432222 23344455558899999999999999986
No 33
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=9.2e-17 Score=160.90 Aligned_cols=234 Identities=13% Similarity=0.101 Sum_probs=164.5
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+++.|++|+ +|+++.+++|+++++.++.+..+.... ......+..+..++ +++||+++.
T Consensus 364 ~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~----------------~~~~~~v~~i~~d~-~g~lWigt~ 425 (781)
T 3v9f_A 364 VVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENR----------------ELLSNSVLCSLKDS-EGNLWFGTY 425 (781)
T ss_dssp CEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC---------------------CCCSBEEEEEECT-TSCEEEEET
T ss_pred ceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCC----------------CCCCcceEEEEECC-CCCEEEEec
Confidence 467899999999 899998888999999876554442100 01123467888887 899999976
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
..||+++++++++++.+... ......+..++.|+ +|++|+++. ++|+++|+.+++++.
T Consensus 426 ~~Gl~~~~~~~~~~~~~~~~--~~~~~~v~~i~~d~-~g~lwigt~-------------------~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 426 LGNISYYNTRLKKFQIIELE--KNELLDVRVFYEDK-NKKIWIGTH-------------------AGVFVIDLASKKVIH 483 (781)
T ss_dssp TEEEEEECSSSCEEEECCST--TTCCCCEEEEEECT-TSEEEEEET-------------------TEEEEEESSSSSCCE
T ss_pred cCCEEEEcCCCCcEEEeccC--CCCCCeEEEEEECC-CCCEEEEEC-------------------CceEEEeCCCCeEEe
Confidence 67899999998888876432 22235678899999 599999763 469999998777655
Q ss_pred eecC------CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCC----ceeeCCCCCEEEEec
Q 019290 196 MYNG------LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPD----NIKSDSKGEFWIAMN 265 (343)
Q Consensus 196 ~~~~------~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~----~i~~d~~G~lwi~~~ 265 (343)
+... ......++.+++|. +|++.. .++|++++.++ ...+.+....+++. .++.|++|+||+++.
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~-~~Gl~~~~~~~----~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGR-FWIGTF-GGGVGIYTPDM----QLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG 557 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCC-EEEEES-SSCEEEECTTC----CEEEEECTTTTCSCSCEEEEEECTTSCEEEEET
T ss_pred cccCcccccccceeEEEEEcCCCC-EEEEEc-CCCEEEEeCCC----CeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC
Confidence 4321 13356777777765 676643 46799998765 33344433333443 467799999999997
Q ss_pred cCCCccccccccccccccCCCcccCCCeE-EEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEcC
Q 019290 266 SARGKIESNKKTAFCEETAKPWFLRDPVG-VKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 343 (343)
. ++ +++|++...+..+...++.....+..+.++ +|+||+++... +.++++
T Consensus 558 ~--------------------------Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~G--l~~~~~ 609 (781)
T 3v9f_A 558 E--------------------------GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTG--ISCYIT 609 (781)
T ss_dssp T--------------------------EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSSC--EEEEET
T ss_pred C--------------------------CceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCCc--eEEEEC
Confidence 6 77 999997766666665555555566677776 89999999654 777764
No 34
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.77 E-value=1.2e-16 Score=143.74 Aligned_cols=224 Identities=15% Similarity=0.186 Sum_probs=153.1
Q ss_pred ccccccCCCCCCCceEEEcCCCCeeEEEe-cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE
Q 019290 25 SYQQLQLPGVVGPESLAFDCNGEGPYVGV-SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF 103 (343)
Q Consensus 25 ~~~~~~~~~~~~p~~l~~d~~g~~l~~~~-~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (343)
..+++ +....|++|+++++|+ +|++. .++.|.++|+.+.+......... .......|.++++
T Consensus 76 ~~~~i--~~~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~--------------~~~~~~~p~~i~~ 138 (328)
T 3dsm_A 76 EVGRI--TGFTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIECPD--------------MDMESGSTEQMVQ 138 (328)
T ss_dssp EEEEE--ECCSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTT--------------CCTTTCBCCCEEE
T ss_pred EEEEc--CCCCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCC--------------ccccCCCcceEEE
Confidence 34445 3345899999998886 77665 78999999998876543211000 0011236788988
Q ss_pred eCCCCeEEEEeC--CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCc
Q 019290 104 NPVTCDLYIADA--YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSG 181 (343)
Q Consensus 104 ~~~~~~l~v~~~--~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
+ ++.||+++. .+.|.++|++++++...... + ..++++++++ +|++|+++....... ......+
T Consensus 139 ~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~--g---~~p~~i~~~~-dG~l~v~~~~~~~~~-------~~~~~~~ 203 (328)
T 3dsm_A 139 Y--GKYVYVNCWSYQNRILKIDTETDKVVDELTI--G---IQPTSLVMDK-YNKMWTITDGGYEGS-------PYGYEAP 203 (328)
T ss_dssp E--TTEEEEEECTTCCEEEEEETTTTEEEEEEEC--S---SCBCCCEECT-TSEEEEEBCCBCTTC-------SSCBCCC
T ss_pred E--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEc--C---CCccceEEcC-CCCEEEEECCCccCC-------ccccCCc
Confidence 4 789999985 35699999999886554322 1 3578999999 699999886521000 0000136
Q ss_pred eEEEEeCCCCceEEeec--CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC-CCCCCceeeCC-C
Q 019290 182 RLLKYDPLKKNVTVMYN--GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM-PRFPDNIKSDS-K 257 (343)
Q Consensus 182 ~v~~~d~~~~~~~~~~~--~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~p~~i~~d~-~ 257 (343)
.|+++|++++++..... ....|++++++++++.||+++. .|+++|..+... ... .+... ...|.++++|+ +
T Consensus 204 ~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~-~~~-~~~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRV-PVR-PFLEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSC-CSS-CSBCCCSSCEEEEEECTTT
T ss_pred eEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCce-eee-eeecCCCCceEEEEEcCCC
Confidence 79999998887653222 2347999999999999999864 899999865322 111 11111 34689999998 7
Q ss_pred CCEEEEe----ccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeC
Q 019290 258 GEFWIAM----NSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDG 309 (343)
Q Consensus 258 G~lwi~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~ 309 (343)
|++|+++ .. .+.|++||++|+.+..+..
T Consensus 279 g~lyva~~~~y~~------------------------~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 279 GEVYVADAIDYQQ------------------------QGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp CCEEEEECTTSSS------------------------EEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEccccccc------------------------CCEEEEECCCCCEEEEEEe
Confidence 8999998 33 3589999999998877754
No 35
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=5.2e-16 Score=139.74 Aligned_cols=256 Identities=14% Similarity=0.146 Sum_probs=165.3
Q ss_pred cccccCccccccccCCCCCCCceEEEcCCCCeeEEEec-------CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCc
Q 019290 17 PCVILSSKSYQQLQLPGVVGPESLAFDCNGEGPYVGVS-------DGRILKWKAANSGWTEFATTAPHRAREICDGSTNT 89 (343)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~p~~l~~d~~g~~l~~~~~-------~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (343)
++.+.+.....+.++.. .|.+++++++|+.+|+... ++.|+.+|..+++......
T Consensus 25 ~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---------------- 86 (353)
T 3vgz_A 25 SFSTQAAEEMLRKAVGK--GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH---------------- 86 (353)
T ss_dssp --------CEEEEEEES--SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE----------------
T ss_pred cccccchhhhhhhhhcc--CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe----------------
Confidence 33333333334444443 7999999999998887653 5689999998876443221
Q ss_pred ccCCCcCCeeeEEEeCCCCeEEEEeCC-CeEEEEeCCCCeEEEcccccCCC-----CccCcceeEEeCCCCeEEEEeCCc
Q 019290 90 TLEPLCGRPLGIKFNPVTCDLYIADAY-FGLMVVGPNGGQAQQLASSAGGI-----PFRFTNDLDIDPNTGIVYFTDSSI 163 (343)
Q Consensus 90 ~~~~~~~~p~gi~~~~~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~-----~~~~~~~i~~d~~dg~l~v~~~~~ 163 (343)
....|.+++++++++.+|+++.. ..|..+|.++++........... ....+.+++++++++.+|+++..
T Consensus 87 ----~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~- 161 (353)
T 3vgz_A 87 ----NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG- 161 (353)
T ss_dssp ----ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-
T ss_pred ----cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-
Confidence 12247889999955569999765 45999999988765433221110 01236789999943458887632
Q ss_pred ccccccceeeeeecCCCceEEEEeCCCCceEEeec-CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceee
Q 019290 164 YFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYN-GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLF 242 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (343)
..+.|+.+|..+++...... ....+.+++++++++.+|+++. ++.|+++++..... ...+
T Consensus 162 ---------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~---~~~~ 222 (353)
T 3vgz_A 162 ---------------KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKI---LSRK 222 (353)
T ss_dssp ---------------SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEE---EEEE
T ss_pred ---------------CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeE---EEEE
Confidence 14579999998887765444 4456899999999999998865 78999999765322 1111
Q ss_pred ec-C---CCCCCceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccC
Q 019290 243 AE-M---PRFPDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLN 316 (343)
Q Consensus 243 ~~-~---~~~p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~ 316 (343)
.. . ...+.+++++++|+ +|++... .+.|+.+|. +++.+..+..+..
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------------------~~~v~~~d~~~~~~~~~~~~~~~---- 274 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSK------------------------AAEVLVVDTRNGNILAKVAAPES---- 274 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESS------------------------SSEEEEEETTTCCEEEEEECSSC----
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCC------------------------CCEEEEEECCCCcEEEEEEcCCC----
Confidence 11 1 12345688999986 7777654 357888997 5677666654322
Q ss_pred CceeE-EEeCCEEEEecCCCCeEEEEcC
Q 019290 317 SVSEV-QEYGEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 317 ~~~~~-~~~~g~l~i~~~~~~~i~~~~~ 343 (343)
.... .++++.||+++...+.|.+++.
T Consensus 275 -~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 275 -LAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp -CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred -ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 1222 2235679999988889988863
No 36
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=8.6e-16 Score=143.69 Aligned_cols=247 Identities=17% Similarity=0.184 Sum_probs=171.5
Q ss_pred CCCCCceEEEcCC-CCeeEEE-ecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE-------
Q 019290 33 GVVGPESLAFDCN-GEGPYVG-VSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF------- 103 (343)
Q Consensus 33 ~~~~p~~l~~d~~-g~~l~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~------- 103 (343)
++..|.+|++||. +..||+. ...++|.++|++++.+..+.... ......|.+|++
T Consensus 137 ~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~----------------~~~~~~p~~ia~~~~~~~~ 200 (496)
T 3kya_A 137 GFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN----------------TIPTNRIRSIAFNKKIEGY 200 (496)
T ss_dssp CCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT----------------TSSCSBEEEEEECCCBTTT
T ss_pred ccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC----------------ccccCCCcEEEEeeccccc
Confidence 4557999999983 4447755 44578999999988777664211 012346899999
Q ss_pred eCCCCeEEEEeCCC-------eEEEEeCCC-CeEE------EcccccCCCCccCcceeEEeCCCCeEEEEeCCccccccc
Q 019290 104 NPVTCDLYIADAYF-------GLMVVGPNG-GQAQ------QLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQ 169 (343)
Q Consensus 104 ~~~~~~l~v~~~~~-------gi~~~d~~~-~~~~------~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~ 169 (343)
+++++.||+++... .+++++++. +.+. .+. ....++++++++.++.||+++..
T Consensus 201 d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~------- 267 (496)
T 3kya_A 201 ADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYE------- 267 (496)
T ss_dssp BCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETT-------
T ss_pred CCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECC-------
Confidence 98445699998654 388887654 3332 121 23578999999955899999876
Q ss_pred ceeeeeecCCCceEEEEeCC-------CCce------------EEee--cCCCCcceeEEecCCCEEEEEEcCCCeEEEE
Q 019290 170 YFMSIATGDRSGRLLKYDPL-------KKNV------------TVMY--NGLSFPNGVALSNNNSFLLLAESATLKILRF 228 (343)
Q Consensus 170 ~~~~~~~~~~~~~v~~~d~~-------~~~~------------~~~~--~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~ 228 (343)
.+.|+++|++ ++.. ..+. .....+.+++++++++.||++++.+++|+++
T Consensus 268 ----------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~ki 337 (496)
T 3kya_A 268 ----------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRS 337 (496)
T ss_dssp ----------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ----------CCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence 5679999987 5543 1211 2334578999999999999999999999998
Q ss_pred EccCcc-ccccceeeecC---C------------CCCC-ceeeC-------CCCCEEEEeccCCCccccccccccccccC
Q 019290 229 WLQGER-TTYTPQLFAEM---P------------RFPD-NIKSD-------SKGEFWIAMNSARGKIESNKKTAFCEETA 284 (343)
Q Consensus 229 ~~~~~~-~~~~~~~~~~~---~------------~~p~-~i~~d-------~~G~lwi~~~~~~~~~~~~~~~~~~~~~~ 284 (343)
+.++.. .+.....++.. . ..|. ++++| ++|+|||++..
T Consensus 338 d~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~------------------ 399 (496)
T 3kya_A 338 DYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL------------------ 399 (496)
T ss_dssp EEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG------------------
T ss_pred ecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC------------------
Confidence 877532 10111222211 1 1366 67777 68999999987
Q ss_pred CCcccCCCeEEEECCCCCEEEEeeCCC--------------C-----CccCCceeEEEe-C-CEEEEecCCCCeEEEEc
Q 019290 285 KPWFLRDPVGVKFDVNGNVVDVLDGNE--------------G-----NTLNSVSEVQEY-G-EYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 285 ~~~~~~~~~v~~~d~~g~~~~~~~~~~--------------~-----~~~~~~~~~~~~-~-g~l~i~~~~~~~i~~~~ 342 (343)
.+.|.+++++|.......... + ..+..+..+..+ . |+|||+....++|.+++
T Consensus 400 ------N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 400 ------NFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTIS 472 (496)
T ss_dssp ------GTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ------CCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEE
Confidence 568999999997766553211 1 134556666666 4 99999999999999986
No 37
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.76 E-value=5.1e-16 Score=155.78 Aligned_cols=235 Identities=12% Similarity=0.153 Sum_probs=165.2
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+++.|++|+.+|+++.+++|+++|+.++++..+.... . ......+..+..++ +++||+++.
T Consensus 407 ~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~--~-------------~l~~~~v~~i~~d~-~g~lwigt~ 470 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRN--S-------------QLVNENVYAILPDG-EGNLWLGTL 470 (795)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTT--S-------------CCSCSCEEEEEECS-SSCEEEEES
T ss_pred cEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCC--C-------------CcCCCeeEEEEECC-CCCEEEEec
Confidence 4568899999986899998889999999988887774210 0 01123467888887 899999975
Q ss_pred CCeEEEEeCCCCeEEEccccc--CCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce
Q 019290 116 YFGLMVVGPNGGQAQQLASSA--GGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV 193 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~--~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 193 (343)
.||+++++++++++.+.... .......+.++..|+ +|++|+++. ++|+++|++++++
T Consensus 471 -~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~-------------------~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 471 -SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGE-------------------EGLSVFKQEGLDI 529 (795)
T ss_dssp -SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEES-------------------SCEEEEEEETTEE
T ss_pred -CceeEEeCCCCeEEEccccccccccCCceEEEEEECC-CCCEEEEeC-------------------CceEEEeCCCCeE
Confidence 89999999998887764321 112235678899999 599999763 3699999876665
Q ss_pred EEeec-----CC--CCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCc----eeeCCCCCEEE
Q 019290 194 TVMYN-----GL--SFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDN----IKSDSKGEFWI 262 (343)
Q Consensus 194 ~~~~~-----~~--~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~----i~~d~~G~lwi 262 (343)
.+.. .+ .....++.+++|. +|++.. ++|++++..+ ..++.+....++|.+ ++.|++|+||+
T Consensus 530 -~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~--~Gl~~~d~~~----~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi 601 (795)
T 4a2l_A 530 -QKASILPVSNVTKLFTNCIYEASNGI-IWVGTR--EGFYCFNEKD----KQIKRYNTTNGLPNNVVYGILEDSFGRLWL 601 (795)
T ss_dssp -EECCCSCSCGGGGSCEEEEEECTTSC-EEEEES--SCEEEEETTT----TEEEEECGGGTCSCSCEEEEEECTTSCEEE
T ss_pred -EEecCCCCCCCCCCeeEEEEECCCCC-EEEEeC--CCceeECCCC----CcEEEeCCCCCCchhheEEEEECCCCCEEE
Confidence 3321 11 1245666666665 677654 3899999765 344444444455554 67899999999
Q ss_pred EeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCc--eeEEE-eCCEEEEecCCCCeEE
Q 019290 263 AMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSV--SEVQE-YGEYLYTGSSVQPYVV 339 (343)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~--~~~~~-~~g~l~i~~~~~~~i~ 339 (343)
++.. ++.+++++...+..+...++.....+ ..+.. .+|+||+|+... +.
T Consensus 602 ~t~~--------------------------Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G--l~ 653 (795)
T 4a2l_A 602 STNR--------------------------GISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGING--IT 653 (795)
T ss_dssp EETT--------------------------EEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTE--EE
T ss_pred EcCC--------------------------ceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCCc--eE
Confidence 9977 89999998888888876666544444 23333 489999999875 66
Q ss_pred EEcC
Q 019290 340 VIKA 343 (343)
Q Consensus 340 ~~~~ 343 (343)
+++|
T Consensus 654 ~~~p 657 (795)
T 4a2l_A 654 TFRP 657 (795)
T ss_dssp EECG
T ss_pred EEcH
Confidence 6653
No 38
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.76 E-value=3.2e-16 Score=136.13 Aligned_cols=188 Identities=19% Similarity=0.310 Sum_probs=135.1
Q ss_pred CCCCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 31 LPGVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 31 ~~~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
..+...|.+|+++++|+ +|++..+++|+++|+++.....+.. .....|.++++++ ++++
T Consensus 63 ~~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~~~~~~~-------------------~~~~~p~~i~~~~-~g~l 121 (270)
T 1rwi_B 63 FNGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQTVLPF-------------------DGLNYPEGLAVDT-QGAV 121 (270)
T ss_dssp CCSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSCCEECCC-------------------CSCSSEEEEEECT-TCCE
T ss_pred eCCcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCceEeeeec-------------------CCcCCCcceEECC-CCCE
Confidence 34456799999999999 6655458899999988765443310 2234689999998 7889
Q ss_pred EEEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC
Q 019290 111 YIADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL 189 (343)
Q Consensus 111 ~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 189 (343)
|+++.. .+|++++..+....... ......++++++++ +|++|+++.. .++|+++|.+
T Consensus 122 ~v~~~~~~~i~~~~~~~~~~~~~~----~~~~~~p~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~ 179 (270)
T 1rwi_B 122 YVADRGNNRVVKLAAGSKTQTVLP----FTGLNDPDGVAVDN-SGNVYVTDTD-----------------NNRVVKLEAE 179 (270)
T ss_dssp EEEEGGGTEEEEECTTCCSCEECC----CCSCCSCCCEEECT-TCCEEEEEGG-----------------GTEEEEECTT
T ss_pred EEEECCCCEEEEEECCCceeEeec----cccCCCceeEEEeC-CCCEEEEECC-----------------CCEEEEEecC
Confidence 999764 45999987654433221 11234689999999 5999998864 4679999988
Q ss_pred CCceEEe-ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEecc
Q 019290 190 KKNVTVM-YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 190 ~~~~~~~-~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
++..... ...+..+.+++++++| .+|+++..+++|++++.++.. ...... ....|.++++|++|++|+++..
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~----~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTT----STVLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSC----CEECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred CCceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCc----ceeeccCCCCCceeEEECCCCCEEEEECC
Confidence 6655433 2344678999999988 699999888999999976522 111111 1134788999999999999887
No 39
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.75 E-value=4e-16 Score=144.10 Aligned_cols=191 Identities=15% Similarity=0.181 Sum_probs=140.7
Q ss_pred CCCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCCC----CeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 32 PGVVGPESLAFDCN-GEGPYVGVSDGRILKWKAANS----GWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 32 ~~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
+++..|.+|++|+. +.++|++..+++|+++++++. ....+. ......|.|+++++.
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-------------------~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------------------SRDIQAPDGLAVDWI 169 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-------------------CSSCSCEEEEEEETT
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-------------------eCCCCCcccEEEEec
Confidence 45668999999975 666778888999999998762 222221 123457899999986
Q ss_pred CCeEEEEeCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 107 TCDLYIADAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 107 ~~~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
.++||+++... .|.++++++...+.+... .+..|++|++|+.+|.||+++... .+.|++
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~----~~~~P~~iavdp~~g~ly~td~~~----------------~~~I~~ 229 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKK 229 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEEC----SSCCEEEEEEETTTTEEEEEECSS----------------SCCEEE
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeC----CCCCcceEEEecccCeEEEEeCCC----------------CCEEEE
Confidence 88999998765 499999987655554321 235689999998568999998641 357999
Q ss_pred EeCCCCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC---CCCCCceeeCCCCCEE
Q 019290 186 YDPLKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM---PRFPDNIKSDSKGEFW 261 (343)
Q Consensus 186 ~d~~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~p~~i~~d~~G~lw 261 (343)
+++++...+.+. .++..|++++++++++.|||+++..++|+++++++ ...+.+... -..|.+++++. +++|
T Consensus 230 ~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG----~~~~~~~~~~~~l~~P~gl~v~~-~~ly 304 (400)
T 3p5b_L 230 GGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG----GNRKTILEDEKRLAHPFSLAVFE-DKVF 304 (400)
T ss_dssp EETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS----CCCEEEEECSSTTSSEEEEEEET-TEEE
T ss_pred EeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC----CccEEEEeCCCCCCCCEEEEEeC-CEEE
Confidence 998865555443 45688999999999999999999999999999987 333444332 24588999964 5688
Q ss_pred EEecc
Q 019290 262 IAMNS 266 (343)
Q Consensus 262 i~~~~ 266 (343)
++++.
T Consensus 305 wtd~~ 309 (400)
T 3p5b_L 305 WTDII 309 (400)
T ss_dssp EEESS
T ss_pred EecCC
Confidence 88876
No 40
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=4.5e-16 Score=155.91 Aligned_cols=240 Identities=13% Similarity=0.083 Sum_probs=164.2
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCC-ccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPH-RAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
...+|+.|++|+ +|+++.+++|+++++.+..+..+...+.. .. .......+.+++.++ +++||+++
T Consensus 314 ~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~v~~i~~d~-~g~lWigt 380 (781)
T 3v9f_A 314 SARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNE-----------SSLSNKVVSSVCDDG-QGKLWIGT 380 (781)
T ss_dssp CEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCS-----------SCCSSSCEEEEEECT-TSCEEEEE
T ss_pred eEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCcccccc-----------CCCCCcceEEEEEcC-CCCEEEEe
Confidence 467899999999 99999888999999988877776432100 00 001123467888887 89999997
Q ss_pred CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 115 AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
...||+++++++++++.+. .........+.+++.|+ +|+||+++. .++|+++++.+++++
T Consensus 381 ~~~Gl~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~d~-~g~lWigt~------------------~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 381 DGGGINVFENGKRVAIYNK-ENRELLSNSVLCSLKDS-EGNLWFGTY------------------LGNISYYNTRLKKFQ 440 (781)
T ss_dssp BSSCEEEEETTEEEEECC------CCCSBEEEEEECT-TSCEEEEET------------------TEEEEEECSSSCEEE
T ss_pred CCCcEEEEECCCCeEEEcc-CCCCCCCcceEEEEECC-CCCEEEEec------------------cCCEEEEcCCCCcEE
Confidence 6789999999877666542 11122335678899998 599999764 357999999888777
Q ss_pred EeecC---CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC------CCCCCceeeCCCCCEEEEec
Q 019290 195 VMYNG---LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM------PRFPDNIKSDSKGEFWIAMN 265 (343)
Q Consensus 195 ~~~~~---~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~p~~i~~d~~G~lwi~~~ 265 (343)
.+... ......++.++++ .+|++.. ++|++++..+ .....+... ......++.|++|+||+++.
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g-~lwigt~--~Gl~~~~~~~----~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 513 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNK-KIWIGTH--AGVFVIDLAS----KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF 513 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTS-EEEEEET--TEEEEEESSS----SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES
T ss_pred EeccCCCCCCeEEEEEECCCC-CEEEEEC--CceEEEeCCC----CeEEecccCcccccccceeEEEEEcCCCCEEEEEc
Confidence 65431 1234566666555 4777654 6899999765 223333221 12234577899999999997
Q ss_pred cCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeE-EEEc
Q 019290 266 SARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYV-VVIK 342 (343)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i-~~~~ 342 (343)
. ++|+++|++++.+..+..+.+.....+..+.++ +|+||+++. +-+ .+|+
T Consensus 514 ~-------------------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~Glv~~~d 565 (781)
T 3v9f_A 514 G-------------------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--EGLVCFPS 565 (781)
T ss_dssp S-------------------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--TEEEEESC
T ss_pred C-------------------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--CCceEEEC
Confidence 3 389999998877777765555445567777776 899999997 335 6654
No 41
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.75 E-value=8e-16 Score=149.45 Aligned_cols=193 Identities=20% Similarity=0.175 Sum_probs=146.5
Q ss_pred cCCCCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCC
Q 019290 30 QLPGVVGPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTC 108 (343)
Q Consensus 30 ~~~~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~ 108 (343)
+++++..|..|++|+. +.++|++...++|++++++++....+.. .....|.||+++...+
T Consensus 344 ~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~-------------------~~~~~p~GlAvD~~~~ 404 (619)
T 3s94_A 344 QLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVT-------------------AQIAHPDGIAVDWVAR 404 (619)
T ss_dssp CCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------------------SSCSCCCEEEEETTTT
T ss_pred eccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEE-------------------CCCCCcCceEEecccC
Confidence 4456778999999984 6666788889999999998765544431 2345789999997688
Q ss_pred eEEEEeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEe
Q 019290 109 DLYIADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYD 187 (343)
Q Consensus 109 ~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 187 (343)
+||+++...+ |.++++++...+.+.. ..+..|++|++|+..|.||++|.+. ..+|++.+
T Consensus 405 ~lY~tD~~~~~I~v~~~~G~~~~~l~~----~~l~~P~~iavdp~~G~ly~tD~g~----------------~~~I~r~~ 464 (619)
T 3s94_A 405 NLYWTDTGTDRIEVTRLNGTMRKILIS----EDLEEPRAIVLDPMVGYMYWTDWGE----------------IPKIERAA 464 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEEC----TTCCSEEEEEEETTTTEEEEEECSS----------------SCEEEEEE
T ss_pred cEEEEeCCCCcEEEEeCCCCeEEEEEE----CCCCCeeeEEEEcCCCcEEEecCCC----------------CCEEEEEc
Confidence 9999997654 8889888654444432 1346799999998559999999751 35799999
Q ss_pred CCCCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEec
Q 019290 188 PLKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAMN 265 (343)
Q Consensus 188 ~~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~~ 265 (343)
.++.....+. ..+..|+|++++++++.|||+++..++|+++++++. ..+.+.. .-..|.+++++.+ +||++++
T Consensus 465 ~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~----~~~~~~~~~l~~P~glav~~~-~ly~tD~ 539 (619)
T 3s94_A 465 LDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGT----GRRVLVEDKIPHIFGFTLLGD-YVYWTDW 539 (619)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSC----CCEEEEECCCCSSCCEEEETT-EEEEECT
T ss_pred cCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCC----ceEEEeccCCCCcEEEEEECC-EEEEeec
Confidence 8855554444 357889999999988899999999999999999873 3333332 2346999999865 8999998
Q ss_pred c
Q 019290 266 S 266 (343)
Q Consensus 266 ~ 266 (343)
.
T Consensus 540 ~ 540 (619)
T 3s94_A 540 Q 540 (619)
T ss_dssp T
T ss_pred C
Confidence 7
No 42
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.73 E-value=1.6e-15 Score=150.62 Aligned_cols=219 Identities=15% Similarity=0.179 Sum_probs=155.8
Q ss_pred cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCe-EEEEeCCCCe----
Q 019290 54 SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFG-LMVVGPNGGQ---- 128 (343)
Q Consensus 54 ~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~g-i~~~d~~~~~---- 128 (343)
....|.+++..+.....+. .....+.+|+++..++.||+++...+ |+++++++..
T Consensus 402 n~~~Ir~i~l~~~~~~~l~--------------------~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~ 461 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLI--------------------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS 461 (791)
T ss_dssp CBSSEEEECTTSCCCEEEE--------------------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------
T ss_pred cccceeEeeccCCcceeee--------------------cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcc
Confidence 3445777777665544432 23456889999987889999987654 9999987532
Q ss_pred EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee-cCCCCcceeE
Q 019290 129 AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY-NGLSFPNGVA 207 (343)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~i~ 207 (343)
.+.+.. ..+..+.+|++|+..++||+++.. .++|++++.++...+.+. ..+..|.+|+
T Consensus 462 ~~~vi~----~~l~~P~GLAvD~~~~~LY~tD~~-----------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIa 520 (791)
T 3m0c_C 462 YDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIV 520 (791)
T ss_dssp CEEEEC----SSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEE
T ss_pred eeEEEe----cCCCCcceeeeeecCCcEEEEecC-----------------CCeEEEEeCCCCeEEEEEeCCCCCcceEE
Confidence 222221 123568999999755699999976 568999999866655554 4677899999
Q ss_pred EecCCCEEEEEEcCC-CeEEEEEccCccccccceeeec-CCCCCCceeeCC-CCCEEEEeccCCCccccccccccccccC
Q 019290 208 LSNNNSFLLLAESAT-LKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDS-KGEFWIAMNSARGKIESNKKTAFCEETA 284 (343)
Q Consensus 208 ~~~d~~~lyv~~~~~-~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~-~G~lwi~~~~~~~~~~~~~~~~~~~~~~ 284 (343)
+++.++.|||++... ++|++++++|. ..+.+.. .-..|.+|++|+ .|+||+++..
T Consensus 521 VDp~~g~LYwtD~g~~~~I~~~~~dG~----~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~------------------ 578 (791)
T 3m0c_C 521 VDPVHGFMYWTDWGTPAKIKKGGLNGV----DIYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------ 578 (791)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSC----CEEEEECSSCSCEEEEEEETTTTEEEEEETT------------------
T ss_pred EecCCCCEEEecCCCCCeEEEEecCCC----ceEEEEeCCCCCceEEEEecCCCeEEEEeCC------------------
Confidence 999888999999765 89999999873 3333433 224699999995 6799999876
Q ss_pred CCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 285 KPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 285 ~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|.+++.+|.....+....+ ....+..+..++++||++.+..++|.+++
T Consensus 579 ------~~~I~~~d~dG~~~~~v~~~~~-~l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 579 ------LHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp ------TTEEEEEETTSCSCEEEEECTT-TTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ------CCcEEEEecCCCceEEEecCCC-ccCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 4588899998765444432222 23344455557889999999999999885
No 43
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.73 E-value=6.3e-16 Score=150.21 Aligned_cols=194 Identities=16% Similarity=0.176 Sum_probs=139.7
Q ss_pred ccCCCCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCe-EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 29 LQLPGVVGPESLAFDCN-GEGPYVGVSDGRILKWKAANSGW-TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 29 ~~~~~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
+.++++..|.+|++++. +.++|++..+++|+++++++... ..+. ......|.||+++..
T Consensus 34 ~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~-------------------~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 34 IVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-------------------VSGLLSPDGLACDWL 94 (619)
T ss_dssp --CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEE-------------------CSSCSCEEEEEEETT
T ss_pred EEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEE-------------------eCCCCCcCeEEEEec
Confidence 34456778999999985 55666888899999999876531 2221 123357999999987
Q ss_pred CCeEEEEeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 107 TCDLYIADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 107 ~~~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
+++||+++...+ |.++++++...+.+.. ..+..|++|++|+.+|.||++|.+. ..+|++
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g~----------------~~~I~r 154 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRAIALDPSSGFMYWTDWGE----------------VPKIER 154 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEC----SSCSCCCCEEEETTTTEEEEEECSS----------------SCEEEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEe----CCCCCCceEEEecCCCeEEEeccCC----------------CCEEEE
Confidence 889999987654 9999998655444432 2246799999998668999999641 357999
Q ss_pred EeCCCCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEE
Q 019290 186 YDPLKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIA 263 (343)
Q Consensus 186 ~d~~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~ 263 (343)
.++++...+.+. ..+..|+|++++++++.|||++...++|+++++++.. .+.+.. ....|.+++++++ ++|++
T Consensus 155 ~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~----~~~~~~~~~~~P~gi~~~~~-~ly~t 229 (619)
T 3s94_A 155 AGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN----RQAVVKGSLPHPFALTLFED-ILYWT 229 (619)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE----EC---------CCCEEESSS-EEEEE
T ss_pred EECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc----cEEEEeCCCCCceEEEEeCC-EEEEe
Confidence 998865555544 4677899999999889999999999999999998732 223322 2346999999976 89999
Q ss_pred ecc
Q 019290 264 MNS 266 (343)
Q Consensus 264 ~~~ 266 (343)
++.
T Consensus 230 d~~ 232 (619)
T 3s94_A 230 DWS 232 (619)
T ss_dssp CTT
T ss_pred cCC
Confidence 887
No 44
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.73 E-value=1.4e-15 Score=138.02 Aligned_cols=258 Identities=17% Similarity=0.203 Sum_probs=156.1
Q ss_pred CCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC---CCe
Q 019290 33 GVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV---TCD 109 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~~~ 109 (343)
++..|++|+++++|+ +|++...++|++++ ++....+...+ ........|.||+++++ ++.
T Consensus 29 ~l~~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~--------------v~~~g~~~p~gia~~pdf~~~g~ 91 (352)
T 2ism_A 29 GLEVPWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELS--------------VYHRGESGLLGLALHPRFPQEPY 91 (352)
T ss_dssp CCSCEEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECC--------------CCCSTTCSEEEEEECTTTTTSCE
T ss_pred CCCCceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecce--------------EeecCCCCceeEEECCCCCCCCE
Confidence 577899999999999 77777779999998 33444443211 01123457999999984 489
Q ss_pred EEEEeCC------CeEEEEeCCCCeE---EEcccccC--CCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecC
Q 019290 110 LYIADAY------FGLMVVGPNGGQA---QQLASSAG--GIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGD 178 (343)
Q Consensus 110 l~v~~~~------~gi~~~d~~~~~~---~~~~~~~~--~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~ 178 (343)
||+++.. +.|.+++.+++++ +.+..... ......++++++++ ||.||+++...... ... .....
T Consensus 92 lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~--~~~--~d~~~ 166 (352)
T 2ism_A 92 VYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYER--ELA--QDLAS 166 (352)
T ss_dssp EEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCG--GGG--GCTTC
T ss_pred EEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCC--ccc--cCCCC
Confidence 9999753 5699998875422 22222111 12235678999999 69999997532100 000 00012
Q ss_pred CCceEEEEeCCC-------------CceEEeecCCCCcceeEEecCCCEEEEEEcCCCe--------EEEEEccCcc---
Q 019290 179 RSGRLLKYDPLK-------------KNVTVMYNGLSFPNGVALSNNNSFLLLAESATLK--------ILRFWLQGER--- 234 (343)
Q Consensus 179 ~~~~v~~~d~~~-------------~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~--------i~~~~~~~~~--- 234 (343)
..++|+|+++++ ...+.+..++..|++++++++.+.||+++...+. |.++...++.
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp 246 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWP 246 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTT
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCC
Confidence 247899999875 2334455677889999999965679999887665 5555432210
Q ss_pred -ccc-----c-ceeeecC--CCCCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC--CCE
Q 019290 235 -TTY-----T-PQLFAEM--PRFPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN--GNV 303 (343)
Q Consensus 235 -~~~-----~-~~~~~~~--~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~--g~~ 303 (343)
..+ . ....... ...|.++++ .+|++|+++.. ...|.+++.+ +..
T Consensus 247 ~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~------------------------~~~v~~v~~~~~~~~ 301 (352)
T 2ism_A 247 RVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLR------------------------GQALLRLVLEGERGR 301 (352)
T ss_dssp TCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETT------------------------TTEEEEEEEEEETTE
T ss_pred cccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECC------------------------CCEEEEEEECCCCcc
Confidence 000 0 0011111 123678888 57899999876 3466777653 321
Q ss_pred E-----EEeeCCCCCccCCceeEEEe-CCEEEEecCCCC----------eEEEE
Q 019290 304 V-----DVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQP----------YVVVI 341 (343)
Q Consensus 304 ~-----~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~----------~i~~~ 341 (343)
. ..+-. . ...+..+... +|.||+++...+ +|+|+
T Consensus 302 ~~~~~~~~~~~--~--~~rp~~v~~~pdG~lyv~~~~~~g~g~~~~~~~~i~ri 351 (352)
T 2ism_A 302 WRVLRVETALS--G--FGRLREVQVGPDGALYVTTSNRDGRGQVRPGDDRVLRL 351 (352)
T ss_dssp EEEEEEEEEEE--S--SCCEEEEEECTTSCEEEEECSTTTTSCCCTTCSCEEEE
T ss_pred eeecchheecc--c--CCCeeEEEECCCCcEEEEEeCCCCCCCCCCCCCEEEEe
Confidence 1 11111 1 2245555555 889999997653 68876
No 45
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.72 E-value=2.4e-15 Score=134.55 Aligned_cols=195 Identities=16% Similarity=0.169 Sum_probs=143.2
Q ss_pred CeeeEEEeCCCCeEEEEeCCCe-EEEEeCCCCeE-EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeee
Q 019290 97 RPLGIKFNPVTCDLYIADAYFG-LMVVGPNGGQA-QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSI 174 (343)
Q Consensus 97 ~p~gi~~~~~~~~l~v~~~~~g-i~~~d~~~~~~-~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~ 174 (343)
.+.++.++..++.||++|...+ |++++++++.. +.+... ....+.++++|+.+++||+++..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~----~l~~p~glavd~~~g~ly~~d~~------------ 99 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS----GLLSPDGLACDWLGEKLYWTDSE------------ 99 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE----CCSCCCEEEEETTTTEEEEEETT------------
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC----CCCCccEEEEEcCCCeEEEEECC------------
Confidence 4678888876789999987654 99999986632 111111 13468899999645899999875
Q ss_pred eecCCCceEEEEeCCCCceEEee-cCCCCcceeEEecCCCEEEEEEcC-CCeEEEEEccCccccccceeeec-CCCCCCc
Q 019290 175 ATGDRSGRLLKYDPLKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESA-TLKILRFWLQGERTTYTPQLFAE-MPRFPDN 251 (343)
Q Consensus 175 ~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~-~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~ 251 (343)
.++|.++++++...+.+. ..+..|+++++++.++.|||++.. .++|+++++++. ..+.+.. .-..|.+
T Consensus 100 -----~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~----~~~~~~~~~l~~Png 170 (318)
T 3sov_A 100 -----TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS----SRFIIINSEIYWPNG 170 (318)
T ss_dssp -----TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC----SCEEEECSSCSCEEE
T ss_pred -----CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC----CeEEEEECCCCCccE
Confidence 568999998865555444 567889999999988899999864 689999999873 2333322 2235999
Q ss_pred eeeCC-CCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEE
Q 019290 252 IKSDS-KGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYT 330 (343)
Q Consensus 252 i~~d~-~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i 330 (343)
+++|+ +++||+++.. .+.|.++|.+|.....+... ....+..+..+.+.||+
T Consensus 171 lavd~~~~~lY~aD~~------------------------~~~I~~~d~dG~~~~~~~~~---~~~~P~glav~~~~lyw 223 (318)
T 3sov_A 171 LTLDYEEQKLYWADAK------------------------LNFIHKSNLDGTNRQAVVKG---SLPHPFALTLFEDILYW 223 (318)
T ss_dssp EEEETTTTEEEEEETT------------------------TTEEEEEETTSCSCEEEECS---CCSCEEEEEEETTEEEE
T ss_pred EEEeccCCEEEEEECC------------------------CCEEEEEcCCCCceEEEecC---CCCCceEEEEeCCEEEE
Confidence 99997 6789999876 45889999887654444321 13345555557889999
Q ss_pred ecCCCCeEEEEcC
Q 019290 331 GSSVQPYVVVIKA 343 (343)
Q Consensus 331 ~~~~~~~i~~~~~ 343 (343)
+....++|.++++
T Consensus 224 td~~~~~V~~~~~ 236 (318)
T 3sov_A 224 TDWSTHSILACNK 236 (318)
T ss_dssp EETTTTEEEEEET
T ss_pred EecCCCeEEEEEC
Confidence 9999999999874
No 46
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.72 E-value=8e-15 Score=142.59 Aligned_cols=218 Identities=13% Similarity=0.140 Sum_probs=160.8
Q ss_pred cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCe-EEEEeCCCCeEEEc
Q 019290 54 SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFG-LMVVGPNGGQAQQL 132 (343)
Q Consensus 54 ~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~g-i~~~d~~~~~~~~~ 132 (343)
....|.+++.++........ ......|.++++++.++.||+++...+ |++++++++..+.+
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~------------------~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v 74 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIP------------------LTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHV 74 (628)
T ss_dssp ETTEEEEEESSCTTCEEECC------------------CCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred eCCcEEEEECCCCCcceEEE------------------cCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEE
Confidence 56778999887654332211 122346889999987899999987654 99999987655554
Q ss_pred ccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee-cCCCCcceeEEecC
Q 019290 133 ASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY-NGLSFPNGVALSNN 211 (343)
Q Consensus 133 ~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~d 211 (343)
... ....|.++|+|+..++||+++.. .++|.+++.++...+.+. ..+..|++++++|.
T Consensus 75 ~~~----g~~~P~GlAvD~~~~~LY~tD~~-----------------~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~ 133 (628)
T 4a0p_A 75 VEF----GLDYPEGMAVDWLGKNLYWADTG-----------------TNRIEVSKLDGQHRQVLVWKDLDSPRALALDPA 133 (628)
T ss_dssp ECS----SCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSTTCEEEECSSCCCEEEEEEETT
T ss_pred EeC----CCCCcceEEEEeCCCEEEEEECC-----------------CCEEEEEecCCCcEEEEEeCCCCCcccEEEccC
Confidence 322 12468999999756899999876 568999998866555554 67788999999998
Q ss_pred CCEEEEEEcC-CCeEEEEEccCccccccceeeecCCCCCCceeeCCC-CCEEEEeccCCCccccccccccccccCCCccc
Q 019290 212 NSFLLLAESA-TLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSK-GEFWIAMNSARGKIESNKKTAFCEETAKPWFL 289 (343)
Q Consensus 212 ~~~lyv~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~-G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (343)
.+.|||++.. .++|+++++++ ...+.+...-..|.++++|++ ++||+++..
T Consensus 134 ~G~lY~tD~g~~~~I~r~~~dG----~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~----------------------- 186 (628)
T 4a0p_A 134 EGFMYWTEWGGKPKIDRAAMDG----SERTTLVPNVGRANGLTIDYAKRRLYWTDLD----------------------- 186 (628)
T ss_dssp TTEEEEEECSSSCEEEEEETTS----CSCEEEECSCSSEEEEEEETTTTEEEEEETT-----------------------
T ss_pred CCeEEEeCCCCCCEEEEEeCCC----CceEEEECCCCCcceEEEccccCEEEEEECC-----------------------
Confidence 8899999865 68999999988 333444443346999999985 789999876
Q ss_pred CCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 290 RDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 290 ~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|.++|.+|.....+.. . ...+..+..++++||++....++|.+++
T Consensus 187 -~~~I~~~d~dG~~~~v~~~--~--l~~P~glav~~~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 187 -TNLIESSNMLGLNREVIAD--D--LPHPFGLTQYQDYIYWTDWSRRSIERAN 234 (628)
T ss_dssp -TTEEEEEETTSCSCEEEEE--C--CSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEcCCCCceEEeec--c--CCCceEEEEECCEEEEecCCCCEEEEEE
Confidence 4588899987754344432 1 2334555567899999999999999986
No 47
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.70 E-value=4.3e-15 Score=147.48 Aligned_cols=191 Identities=15% Similarity=0.200 Sum_probs=139.3
Q ss_pred CCCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCCC----CeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 32 PGVVGPESLAFDCN-GEGPYVGVSDGRILKWKAANS----GWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 32 ~~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
+++..|.+|+++.. +.++|++..+++|++++.++. ....+. ......|.||+++..
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi-------------------~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------------------SRDIQAPDGLAVDWI 481 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-------------------CSSCSCCCEEEEETT
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE-------------------ecCCCCcceeeeeec
Confidence 35668999999984 666678888899999998753 122221 124457899999986
Q ss_pred CCeEEEEeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 107 TCDLYIADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 107 ~~~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
+++||+++...+ |.++++++...+.+... .+..|++|++|+..|.||+++.+. ..+|++
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~----~l~~P~gIaVDp~~g~LYwtD~g~----------------~~~I~~ 541 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKK 541 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECSS----------------SCEEEE
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeC----CCCCcceEEEecCCCCEEEecCCC----------------CCeEEE
Confidence 779999997654 99999987665555321 235689999998558999999651 367999
Q ss_pred EeCCCCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC---CCCCCceeeCCCCCEE
Q 019290 186 YDPLKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM---PRFPDNIKSDSKGEFW 261 (343)
Q Consensus 186 ~d~~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~p~~i~~d~~G~lw 261 (343)
+++++...+.+. ..+..|++|++++.++.|||++...++|++++++|. ..+.+... -..|.+|+++. ++||
T Consensus 542 ~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~----~~~~v~~~~~~l~~P~glav~~-~~lY 616 (791)
T 3m0c_C 542 GGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG----NRKTILEDEKRLAHPFSLAVFE-DKVF 616 (791)
T ss_dssp EETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC----SCEEEEECTTTTSSEEEEEEET-TEEE
T ss_pred EecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC----ceEEEecCCCccCCCCEEEEeC-CEEE
Confidence 999866655554 456889999999888899999999999999999873 33333321 12466777754 5899
Q ss_pred EEecc
Q 019290 262 IAMNS 266 (343)
Q Consensus 262 i~~~~ 266 (343)
++++.
T Consensus 617 wtD~~ 621 (791)
T 3m0c_C 617 WTDII 621 (791)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99987
No 48
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.70 E-value=1.6e-15 Score=136.24 Aligned_cols=203 Identities=14% Similarity=0.191 Sum_probs=133.0
Q ss_pred CCCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCC--CeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCe
Q 019290 32 PGVVGPESLAFDCNGEGPYVGVSDGRILKWKAANS--GWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCD 109 (343)
Q Consensus 32 ~~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~ 109 (343)
..+..|.+|+++++|++++++..+++|++|++++. ....+..... . |. .......|.++++++++++
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~-~------g~----~~~~~~~P~~ia~~~~~g~ 156 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ-P------GS----DQNHFCQPTDVAVEPSTGA 156 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB-C------CC----STTCCSSEEEEEECTTTCC
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC-C------CC----CccccCCCcEEEEeCCCCe
Confidence 35568999999999995556777899999998765 3333321000 0 00 0123457999999986789
Q ss_pred EEEEeC-C-CeEEEEeCCCCeEEEcccccC-----CCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCce
Q 019290 110 LYIADA-Y-FGLMVVGPNGGQAQQLASSAG-----GIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 110 l~v~~~-~-~gi~~~d~~~~~~~~~~~~~~-----~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
||+++. . ..|.+++.++.....+..... ...+..|+++++|+..|++|+++.. .++
T Consensus 157 lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-----------------~~~ 219 (329)
T 3fvz_A 157 VFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-----------------NGR 219 (329)
T ss_dssp EEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-----------------TTE
T ss_pred EEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-----------------CCE
Confidence 999995 3 459999976444443322111 1234669999999932899999876 568
Q ss_pred EEEEeCCCCceEEeec---CCCCcceeEEec------CCCEEEEEEcCCCeEEEEEccCccccccceeee---cCCCCCC
Q 019290 183 LLKYDPLKKNVTVMYN---GLSFPNGVALSN------NNSFLLLAESATLKILRFWLQGERTTYTPQLFA---EMPRFPD 250 (343)
Q Consensus 183 v~~~d~~~~~~~~~~~---~~~~~~~i~~~~------d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~p~ 250 (343)
|.+|++++++...... ....+.+++++| +++ +|+++....+|++++...... ...+. .....|.
T Consensus 220 I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~~---~~~~~~~~~~~~~p~ 295 (329)
T 3fvz_A 220 IQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGEI---IDVFKPVRKHFDMPH 295 (329)
T ss_dssp EEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCCE---EEEECCSSSCCSSEE
T ss_pred EEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCeE---EEEEcCCCCccCCee
Confidence 9999988666543321 123455566665 444 555555667899998764221 12221 1123588
Q ss_pred ceeeCCCCCEEEEecc
Q 019290 251 NIKSDSKGEFWIAMNS 266 (343)
Q Consensus 251 ~i~~d~~G~lwi~~~~ 266 (343)
++++|++|++|+++..
T Consensus 296 ~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 296 DIVASEDGTVYIGDAH 311 (329)
T ss_dssp EEEECTTSEEEEEESS
T ss_pred EEEECCCCCEEEEECC
Confidence 9999999999999876
No 49
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.68 E-value=1.1e-14 Score=134.93 Aligned_cols=192 Identities=14% Similarity=0.142 Sum_probs=132.6
Q ss_pred CCCceEEEcCCCCeeEEEecCC--EEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEE
Q 019290 35 VGPESLAFDCNGEGPYVGVSDG--RILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLY 111 (343)
Q Consensus 35 ~~p~~l~~d~~g~~l~~~~~~g--~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~ 111 (343)
..|. ++++++|+.+|+...++ +|+++++.++... .+... .......|++++++++++.||
T Consensus 172 ~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~----------------~~~~~~~p~~iav~p~~g~ly 234 (409)
T 3hrp_A 172 KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQL----------------GSTFSGKIGAVALDETEEWLY 234 (409)
T ss_dssp CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEEC----------------CTTSCSCCCBCEECTTSSEEE
T ss_pred CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeec----------------cchhcCCcEEEEEeCCCCeEE
Confidence 3577 99999999778665543 8999998764432 22100 011345689999998778999
Q ss_pred EEeCCCeEEEEeCCCCeEEEcccc-cCCCCccCcc-eeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC
Q 019290 112 IADAYFGLMVVGPNGGQAQQLASS-AGGIPFRFTN-DLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL 189 (343)
Q Consensus 112 v~~~~~gi~~~d~~~~~~~~~~~~-~~~~~~~~~~-~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 189 (343)
+++....|+++|++++....+... ..+.....|. ++++++.+++||+++.. .+.|++++.+
T Consensus 235 v~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~~~~~ 297 (409)
T 3hrp_A 235 FVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYKITPD 297 (409)
T ss_dssp EECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEEECTT
T ss_pred EEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEEEecC
Confidence 986544599999988765544211 1111112234 99999944899999875 5689999987
Q ss_pred CCceEEeecC---------------CCCcceeEEecCCCEEEEEEc-CCCeEEEEEccCccccccceeeecC--------
Q 019290 190 KKNVTVMYNG---------------LSFPNGVALSNNNSFLLLAES-ATLKILRFWLQGERTTYTPQLFAEM-------- 245 (343)
Q Consensus 190 ~~~~~~~~~~---------------~~~~~~i~~~~d~~~lyv~~~-~~~~i~~~~~~~~~~~~~~~~~~~~-------- 245 (343)
+ ....+... +..|++++++++|. ||+++. .+++|.++++.. +....+...
T Consensus 298 g-~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~----G~v~~~~g~~~~~g~~~ 371 (409)
T 3hrp_A 298 G-ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILD----GYVSTVAGQVDVASQID 371 (409)
T ss_dssp C-CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTT----TEEEEEEECTTCBSCCC
T ss_pred C-CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCC----CEEEEEeCCCCCCCcCC
Confidence 4 34443321 45699999999987 999999 999999999543 122222111
Q ss_pred -------CCCCCceeeCCCCCEEEEecc
Q 019290 246 -------PRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 246 -------~~~p~~i~~d~~G~lwi~~~~ 266 (343)
-..|.++++|++|+|||++..
T Consensus 372 g~~~~~~~~~P~giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 372 GTPLEATFNYPYDICYDGEGGYWIAEAW 399 (409)
T ss_dssp BSTTTCCBSSEEEEEECSSSEEEEEEST
T ss_pred CChhceEeCCceEEEEcCCCCEEEEECC
Confidence 125889999999999999987
No 50
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.68 E-value=5.7e-16 Score=152.71 Aligned_cols=209 Identities=15% Similarity=0.198 Sum_probs=148.5
Q ss_pred CCCCCCceEEEcCCC-CeeEEEecCCEEEEEEcCCC----CeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 32 PGVVGPESLAFDCNG-EGPYVGVSDGRILKWKAANS----GWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 32 ~~~~~p~~l~~d~~g-~~l~~~~~~g~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
+.+..|.+|++++++ .++|++..+++|+++++++. .... ........|.||++++.
T Consensus 403 ~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~-------------------~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 403 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-------------------VISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCC-------------------BCCSCC--CCCEECCCS
T ss_pred ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEE-------------------EEeCCCCCcceEEEEee
Confidence 455689999999864 55556677889999998752 1111 11123446889999965
Q ss_pred CCeEEEEeCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 107 TCDLYIADAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 107 ~~~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
+++||+++... .|.++++++...+.+... .+..|++|++|+.+|.||+++... .++|++
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~----~~~~P~giavDp~~g~ly~td~~~----------------~~~I~~ 523 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE----QGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKK 523 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCC----SSCCCCCEECCSSSSCCEECCCSS----------------SCCEEB
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeC----CCCCcceEEEccCCCcEEEcccCC----------------CCeEEE
Confidence 88999998664 499999987665554322 235689999998558899988641 367999
Q ss_pred EeCCCCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec---CCCCCCceeeCCCCCEE
Q 019290 186 YDPLKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE---MPRFPDNIKSDSKGEFW 261 (343)
Q Consensus 186 ~d~~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~p~~i~~d~~G~lw 261 (343)
+++++...+.+. ..+..|++|+++++++.|||+++..++|+++++++. ..+.+.. ....|.+|++|.+ +||
T Consensus 524 ~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~----~~~~~~~~~~~~~~P~glavd~~-~ly 598 (699)
T 1n7d_A 524 GGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG----NRKTILEDEKRLAHPFSLAVFED-KVF 598 (699)
T ss_dssp CCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS----CCEEECCCSSSCSSCCCCEEETT-EEE
T ss_pred EeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC----ceEEEEecCCcCCCceEeEEECC-EEE
Confidence 988754444333 457789999999998899999999999999999872 3333332 1246999999976 688
Q ss_pred EEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEee
Q 019290 262 IAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLD 308 (343)
Q Consensus 262 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~ 308 (343)
++.+. .+.|.++++ +|+....+.
T Consensus 599 wtd~~------------------------~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 599 WTDII------------------------NEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EECST------------------------TTCEEEEETTTEEEEECCC
T ss_pred EEeCC------------------------CCeEEEEEccCCCceEEee
Confidence 88776 457888987 566665553
No 51
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.67 E-value=2.3e-14 Score=125.65 Aligned_cols=201 Identities=17% Similarity=0.292 Sum_probs=141.8
Q ss_pred CcCCeeeEEEeCCCCeEEEEeCC-CeEEEEeCCCCeEEEccccc-CCCCccCcceeEEe-CCCCeEEEEeCCcccccccc
Q 019290 94 LCGRPLGIKFNPVTCDLYIADAY-FGLMVVGPNGGQAQQLASSA-GGIPFRFTNDLDID-PNTGIVYFTDSSIYFQRRQY 170 (343)
Q Consensus 94 ~~~~p~gi~~~~~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~-~~~~~~~~~~i~~d-~~dg~l~v~~~~~~~~~~~~ 170 (343)
....|.++++++ ++++|+++.. .+|.++|+++.....+.... .......+.+++++ + +|++|+++...
T Consensus 28 ~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~-~g~l~v~~~~~------- 98 (286)
T 1q7f_A 28 QFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRN-SGDIIVTERSP------- 98 (286)
T ss_dssp CBSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETT-TTEEEEEECGG-------
T ss_pred ccCCCceEEECC-CCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcC-CCeEEEEcCCC-------
Confidence 445789999998 7899999755 45999999855444442211 11223568899995 6 69999988531
Q ss_pred eeeeeecCCCceEEEEeCCCCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec--CCC
Q 019290 171 FMSIATGDRSGRLLKYDPLKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE--MPR 247 (343)
Q Consensus 171 ~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~ 247 (343)
.+.|+++|.++.....+. .....+.+++++++++ +|+++...++|++|+.++. ....+.. ...
T Consensus 99 ---------~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~ 164 (286)
T 1q7f_A 99 ---------THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGN----VLHKFGCSKHLE 164 (286)
T ss_dssp ---------GCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSC----EEEEEECTTTCS
T ss_pred ---------CCEEEEECCCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCC----EEEEeCCCCccC
Confidence 357999996544343332 2345789999999886 8999888899999997652 2222221 112
Q ss_pred CCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CC
Q 019290 248 FPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GE 326 (343)
Q Consensus 248 ~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g 326 (343)
.|.++++|++|++|+++.. .+.|.++|++++.+..+... + ....+..+..+ +|
T Consensus 165 ~p~~i~~~~~g~l~v~~~~------------------------~~~i~~~~~~g~~~~~~~~~-g-~~~~p~~i~~d~~G 218 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNR------------------------AHCVKVFNYEGQYLRQIGGE-G-ITNYPIGVGINSNG 218 (286)
T ss_dssp SEEEEEECSSSEEEEEEGG------------------------GTEEEEEETTCCEEEEESCT-T-TSCSEEEEEECTTC
T ss_pred CcEEEEECCCCCEEEEECC------------------------CCEEEEEcCCCCEEEEEccC-C-ccCCCcEEEECCCC
Confidence 4888999999999999875 35889999999877766532 2 13455666665 78
Q ss_pred EEEEecCCCC-eEEEEcC
Q 019290 327 YLYTGSSVQP-YVVVIKA 343 (343)
Q Consensus 327 ~l~i~~~~~~-~i~~~~~ 343 (343)
+||+++...+ .|.++++
T Consensus 219 ~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 219 EILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp CEEEEECSSSCEEEEECT
T ss_pred CEEEEeCCCCEEEEEECC
Confidence 9999999887 8988864
No 52
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.67 E-value=1.6e-14 Score=131.11 Aligned_cols=263 Identities=14% Similarity=0.149 Sum_probs=159.6
Q ss_pred CCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC---CCe
Q 019290 33 GVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV---TCD 109 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~~~ 109 (343)
++..|++|+++++|+ +|++...++|+++++++ . ..+...+ ........|.||+++++ ++.
T Consensus 27 ~l~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G-~-~~~~~~~--------------v~~~g~~g~~gia~~pdf~~~g~ 89 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGR-YLVTERPGRLVLISPSG-K-KLVASFD--------------VANVGEAGLLGLALHPEFPKKSW 89 (354)
T ss_dssp SCSCEEEEEEEETTE-EEEEETTTEEEEECSSC-E-EEEEECC--------------CCCSTTCSEEEEEECTTTTTSCE
T ss_pred CCCCCeEEEEcCCCe-EEEEeCCCEEEEEeCCC-c-eEeeccc--------------eeecCCCceeeEEeCCCCCcCCE
Confidence 677899999999999 77777779999997544 3 4443211 00122346899999984 589
Q ss_pred EEEEeCC--------CeEEEEeCCCC--e---EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeee
Q 019290 110 LYIADAY--------FGLMVVGPNGG--Q---AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIAT 176 (343)
Q Consensus 110 l~v~~~~--------~gi~~~d~~~~--~---~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~ 176 (343)
||++... +.|.+++.+.+ . .+.+...........+++|++++ ||.||+++....... .. ...
T Consensus 90 lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~--~~--~d~ 164 (354)
T 3a9g_A 90 VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPR--LA--QDL 164 (354)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGG--GG--TCT
T ss_pred EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCc--cc--cCC
Confidence 9999753 56999987654 1 22222211122235678999999 699999874321000 00 000
Q ss_pred cCCCceEEEEeCCCC--------ceEEeecCCCCcceeEEecCCCEEEEEEcCCCe---EEEEEccCcc---------cc
Q 019290 177 GDRSGRLLKYDPLKK--------NVTVMYNGLSFPNGVALSNNNSFLLLAESATLK---ILRFWLQGER---------TT 236 (343)
Q Consensus 177 ~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~---i~~~~~~~~~---------~~ 236 (343)
....++|+|+++++. ..+.+..++..|++++++++...||+++...+. |.++...++. ..
T Consensus 165 ~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~ 244 (354)
T 3a9g_A 165 SSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGR 244 (354)
T ss_dssp TCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCC
T ss_pred CCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCC
Confidence 112478999998754 235566678889999999955569999876544 5555422210 00
Q ss_pred ccc-eeeecC---CCCCCceee-------CCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC--CCE
Q 019290 237 YTP-QLFAEM---PRFPDNIKS-------DSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN--GNV 303 (343)
Q Consensus 237 ~~~-~~~~~~---~~~p~~i~~-------d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~--g~~ 303 (343)
... ...... ...|.++++ +.+|++|+++.. ...|.+++.+ ++.
T Consensus 245 ~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~------------------------~~~v~~~~~~~~g~~ 300 (354)
T 3a9g_A 245 GEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLR------------------------GSMLAAVNFGDNMEV 300 (354)
T ss_dssp TTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETT------------------------TTEEEEEEECGGGCE
T ss_pred CCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcC------------------------CCEEEEEEECCCCcc
Confidence 000 111111 124777887 467899999876 3467777654 443
Q ss_pred EEEeeCCCCCccCCceeEEEe-CCEEEEecCC-CC---------eEEEEc
Q 019290 304 VDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSV-QP---------YVVVIK 342 (343)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~-~~---------~i~~~~ 342 (343)
........+ ....+..+... +|.||+++.. .. +|+|+.
T Consensus 301 ~~~~~~~~~-~~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~ 349 (354)
T 3a9g_A 301 RKISTFFKN-VFGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIV 349 (354)
T ss_dssp EEEEEECTT-TSCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEE
T ss_pred cceeeeccC-CCCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEe
Confidence 211111111 12345555555 8899999874 32 898875
No 53
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.67 E-value=2.5e-15 Score=148.16 Aligned_cols=220 Identities=15% Similarity=0.161 Sum_probs=151.8
Q ss_pred cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCC-eEEEEeCCC----Ce
Q 019290 54 SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYF-GLMVVGPNG----GQ 128 (343)
Q Consensus 54 ~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~-gi~~~d~~~----~~ 128 (343)
+.+.|.+++..+.+...+ ......|.++++++.++.||+++... .|+++++++ ..
T Consensus 384 ~~~~I~~id~~~~~~~~~--------------------~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~ 443 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSL--------------------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS 443 (699)
T ss_dssp CTTC-CEECTTSCCEECC--------------------SCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC
T ss_pred CccceEEEeCCCCcceee--------------------eccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc
Confidence 345678888776554332 13345688999998678999998664 499999875 12
Q ss_pred EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee-cCCCCcceeE
Q 019290 129 AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY-NGLSFPNGVA 207 (343)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~i~ 207 (343)
...+. ...+..+.+|++|+.+++||+++.. .++|+++++++...+.+. ..+..|++++
T Consensus 444 ~~~~i----~~~~~~P~glavD~~~g~LY~tD~~-----------------~~~I~v~d~dg~~~~~l~~~~~~~P~gia 502 (699)
T 1n7d_A 444 YDTVI----SRDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFREQGSKPRAIV 502 (699)
T ss_dssp CCCBC----CSCC--CCCEECCCSSSBCEECCTT-----------------TSCEEEEBSSSCCEEEECCCSSCCCCCEE
T ss_pred eEEEE----eCCCCCcceEEEEeeCCcEEEEecc-----------------CCeEEEEecCCCceEEEEeCCCCCcceEE
Confidence 11111 1123468899999645899998865 567999998866655554 3567899999
Q ss_pred EecCCCEEEEEEcCC-CeEEEEEccCccccccceeeec-CCCCCCceeeCCC-CCEEEEeccCCCccccccccccccccC
Q 019290 208 LSNNNSFLLLAESAT-LKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSK-GEFWIAMNSARGKIESNKKTAFCEETA 284 (343)
Q Consensus 208 ~~~d~~~lyv~~~~~-~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~-G~lwi~~~~~~~~~~~~~~~~~~~~~~ 284 (343)
++++++.|||++... ++|+++++++. ..+.+.. .-..|.+|++|++ ++||+++..
T Consensus 503 vDp~~g~ly~td~~~~~~I~~~~~dG~----~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~------------------ 560 (699)
T 1n7d_A 503 VDPVHGFMYWTDWGTPAKIKKGGLNGV----DIYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------ 560 (699)
T ss_dssp CCSSSSCCEECCCSSSCCEEBCCSSSC----CCCEESCSSCSSCCCEEECTTTCCEEEEETT------------------
T ss_pred EccCCCcEEEcccCCCCeEEEEeCCCC----CeeEEEeCCCCCccEEEEeccCCEEEEEecC------------------
Confidence 999888899998765 79999998763 2233322 2246999999975 799999876
Q ss_pred CCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEcC
Q 019290 285 KPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 285 ~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~~ 343 (343)
.+.|.+++.+|.....+..... ....+..+..+.++||++.+..++|.++++
T Consensus 561 ------~~~I~~~d~dG~~~~~~~~~~~-~~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 561 ------LHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp ------TTEEEEECSSSSCCEEECCCSS-SCSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred ------CCeEEEEccCCCceEEEEecCC-cCCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 4588999998765444432212 123344444567899999999999999863
No 54
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.65 E-value=7.1e-14 Score=125.55 Aligned_cols=233 Identities=12% Similarity=0.093 Sum_probs=155.1
Q ss_pred CCceEEEcCCCCeeEEE-ecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 36 GPESLAFDCNGEGPYVG-VSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~-~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
.|++++++ +++ +|+. ..++.|..+|+.+.+.. .+. ....|.++++++ ++.+|++
T Consensus 45 ~~~~i~~~-~~~-lyv~~~~~~~v~viD~~t~~~~~~i~---------------------~~~~p~~i~~~~-~g~lyv~ 100 (328)
T 3dsm_A 45 VAQSMVIR-DGI-GWIVVNNSHVIFAIDINTFKEVGRIT---------------------GFTSPRYIHFLS-DEKAYVT 100 (328)
T ss_dssp CEEEEEEE-TTE-EEEEEGGGTEEEEEETTTCCEEEEEE---------------------CCSSEEEEEEEE-TTEEEEE
T ss_pred cceEEEEE-CCE-EEEEEcCCCEEEEEECcccEEEEEcC---------------------CCCCCcEEEEeC-CCeEEEE
Confidence 58899885 344 6654 45688999999887653 331 224689999977 6799999
Q ss_pred e-CCCeEEEEeCCCCeEEEcccccC-CCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCC
Q 019290 114 D-AYFGLMVVGPNGGQAQQLASSAG-GIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKK 191 (343)
Q Consensus 114 ~-~~~gi~~~d~~~~~~~~~~~~~~-~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 191 (343)
+ ....|.++|++++++........ ......+.+++++ ++++|+++.+ ..+.|.++|++++
T Consensus 101 ~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~----------------~~~~v~viD~~t~ 162 (328)
T 3dsm_A 101 QIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWS----------------YQNRILKIDTETD 162 (328)
T ss_dssp EBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECT----------------TCCEEEEEETTTT
T ss_pred ECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCC----------------CCCEEEEEECCCC
Confidence 8 44669999999988764332221 1112367889984 4899998752 0457999999888
Q ss_pred ceEEeecCCCCcceeEEecCCCEEEEEEcCC----------CeEEEEEccCccccccceeee-cCCCCCCceeeCCCC-C
Q 019290 192 NVTVMYNGLSFPNGVALSNNNSFLLLAESAT----------LKILRFWLQGERTTYTPQLFA-EMPRFPDNIKSDSKG-E 259 (343)
Q Consensus 192 ~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~----------~~i~~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~G-~ 259 (343)
++.........|.+++++++|+ +|++.... +.|+++|..+... .+.+. .....|.+++++++| .
T Consensus 163 ~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v---~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 163 KVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTV---EKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp EEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEE---EEEEECCTTCCCEEEEECTTSCE
T ss_pred eEEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeE---EEEEecCCCCCceeEEEecCCCE
Confidence 7654444456789999999886 77776654 7899999765221 11221 112358999999976 5
Q ss_pred EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEee-CCCCCccCCceeEEE--eCCEEEEec----
Q 019290 260 FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD-GNEGNTLNSVSEVQE--YGEYLYTGS---- 332 (343)
Q Consensus 260 lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~-~~~~~~~~~~~~~~~--~~g~l~i~~---- 332 (343)
+|++. . .|+++|.+...+.... .+.+ ...+..+.. ++++||+++
T Consensus 239 lyv~~-~--------------------------~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp~~g~lyva~~~~y 289 (328)
T 3dsm_A 239 LYWIN-N--------------------------DIWRMPVEADRVPVRPFLEFR--DTKYYGLTVNPNNGEVYVADAIDY 289 (328)
T ss_dssp EEEES-S--------------------------SEEEEETTCSSCCSSCSBCCC--SSCEEEEEECTTTCCEEEEECTTS
T ss_pred EEEEc-c--------------------------EEEEEECCCCceeeeeeecCC--CCceEEEEEcCCCCeEEEEccccc
Confidence 66653 3 5778988543221111 1111 234555544 378999999
Q ss_pred CCCCeEEEEcC
Q 019290 333 SVQPYVVVIKA 343 (343)
Q Consensus 333 ~~~~~i~~~~~ 343 (343)
..++.|.+|++
T Consensus 290 ~~~~~V~v~d~ 300 (328)
T 3dsm_A 290 QQQGIVYRYSP 300 (328)
T ss_dssp SSEEEEEEECT
T ss_pred ccCCEEEEECC
Confidence 78889999874
No 55
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.64 E-value=7.6e-14 Score=139.27 Aligned_cols=237 Identities=14% Similarity=0.129 Sum_probs=149.2
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCC---CeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANS---GWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
..+++.|++|+ +|+++. ++++++++.++ .+..+..... . .......+..+..++ +++||++
T Consensus 326 v~~i~~D~~g~-lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~~-~------------~~l~~~~v~~i~~d~-~g~lWig 389 (758)
T 3ott_A 326 FYSLFRDSKGF-YWFGGA-NGLIRFTDPAGERHDAIWYRMGDK-T------------YPLSHNRIRHIYEDK-EQQLWIA 389 (758)
T ss_dssp EEEEEECTTCC-EEEEET-TEEEEESCTTSSCCCCEEECTTCS-S------------SCCSCSCEEEEEECT-TSCEEEE
T ss_pred EEEEEEcCCCC-EEEeeC-CcceeecccccccceeEEeccCCc-C------------CCCCCCceEEEEECC-CCCEEEE
Confidence 56899999999 898885 57999988753 2333321000 0 001122467788887 8999999
Q ss_pred eCCCeEEEEeCCCCeEEEcccccC-C-CCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC-
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAG-G-IPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK- 190 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~-~-~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~- 190 (343)
+ ..||.++++++++++.+..... . .+...+.++..|+ +|+||+++.. ++|+++|+.+
T Consensus 390 t-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWigT~~------------------~Gl~~~~~~~~ 449 (758)
T 3ott_A 390 T-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDT-AGQLWISTCL------------------GGIFVVDKHKL 449 (758)
T ss_dssp E-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECT-TSEEEEEESS------------------SCEEEEEHHHH
T ss_pred e-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcC-CCCEEEEECC------------------CceEEEccccc
Confidence 7 5699999999988876642111 1 1234577889999 5999997753 4688888642
Q ss_pred -----CceE---Ee--ecCCC--CcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec--C--CCCCCceee
Q 019290 191 -----KNVT---VM--YNGLS--FPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE--M--PRFPDNIKS 254 (343)
Q Consensus 191 -----~~~~---~~--~~~~~--~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~--~~~p~~i~~ 254 (343)
+.+. .+ ..++. ....++.+++|. +|+.....++|++++... .+.+.+.. . ...+..++.
T Consensus 450 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~----~~~~~~~~~~~~~~~~~~~i~~ 524 (758)
T 3ott_A 450 MQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRT----REVTKLFADELTGEKSPNYLLC 524 (758)
T ss_dssp HHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTT----TEEEEECTTTSCGGGCEEEEEE
T ss_pred cccCCcceecccccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCC----CceEEecCCCcCCCcccceEEE
Confidence 1121 11 11222 245666776665 776322347899999765 23333321 1 122455788
Q ss_pred CCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCC
Q 019290 255 DSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSV 334 (343)
Q Consensus 255 d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~ 334 (343)
|++|+||+++.. ++++++++...+..+. .++.....+..+.+++|+||+++..
T Consensus 525 d~~g~lWigt~~--------------------------Gl~~~~~~~~~~~~~~-~~gl~~~~i~~i~~~~g~lWi~t~~ 577 (758)
T 3ott_A 525 DEDGLLWVGFHG--------------------------GVMRINPKDESQQSIS-FGSFSNNEILSMTCVKNSIWVSTTN 577 (758)
T ss_dssp CTTSCEEEEETT--------------------------EEEEECC--CCCCBCC-CCC---CCEEEEEEETTEEEEEESS
T ss_pred CCCCCEEEEecC--------------------------ceEEEecCCCceEEec-ccCCCccceEEEEECCCCEEEECCC
Confidence 999999999976 8999999766554443 2343445667777789999999954
Q ss_pred CCeEEEEcC
Q 019290 335 QPYVVVIKA 343 (343)
Q Consensus 335 ~~~i~~~~~ 343 (343)
. +.+|++
T Consensus 578 G--l~~~~~ 584 (758)
T 3ott_A 578 G--LWIIDR 584 (758)
T ss_dssp C--EEEEET
T ss_pred C--eEEEcC
Confidence 3 777764
No 56
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.63 E-value=1.3e-13 Score=124.10 Aligned_cols=248 Identities=11% Similarity=0.118 Sum_probs=150.5
Q ss_pred CCCCceEEEcCCCCeeEEEec---CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 34 VVGPESLAFDCNGEGPYVGVS---DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 34 ~~~p~~l~~d~~g~~l~~~~~---~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
...|.+++++++|+ +|+... ++.|+.|+..+++...+... ......|.+++++++++.|
T Consensus 39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~-----------------~~~~~~p~~~a~spdg~~l 100 (347)
T 3hfq_A 39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV-----------------VAPGTPPAYVAVDEARQLV 100 (347)
T ss_dssp CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE-----------------EEESCCCSEEEEETTTTEE
T ss_pred cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee-----------------ecCCCCCEEEEECCCCCEE
Confidence 35799999999999 775544 57899999877665444210 0123457899999955568
Q ss_pred EEEeCCC-eEEEEeCC-CCeEEEcccccC-C------CCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCc
Q 019290 111 YIADAYF-GLMVVGPN-GGQAQQLASSAG-G------IPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSG 181 (343)
Q Consensus 111 ~v~~~~~-gi~~~d~~-~~~~~~~~~~~~-~------~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
|+++... .+..++.+ ++..+.+..... + .....++.+++++ ||++|+++.. .+
T Consensus 101 ~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~-----------------~~ 162 (347)
T 3hfq_A 101 YSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLG-----------------SD 162 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETT-----------------TT
T ss_pred EEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCC-----------------CC
Confidence 9887444 47777763 444443322111 0 1123577899999 5888887764 45
Q ss_pred eEEEEeCC-CCceEEe----ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCc-cccccceeeecCC------CCC
Q 019290 182 RLLKYDPL-KKNVTVM----YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGE-RTTYTPQLFAEMP------RFP 249 (343)
Q Consensus 182 ~v~~~d~~-~~~~~~~----~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~------~~p 249 (343)
.|+.|+.+ +++.... ......+..++++|||+.+|++....+.|.+|+++.. ..+.....+...+ ..|
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEE
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcc
Confidence 67777765 4554422 1233467889999999999999888899999988741 1101111111111 124
Q ss_pred CceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEE--eCC
Q 019290 250 DNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQE--YGE 326 (343)
Q Consensus 250 ~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~g 326 (343)
.+++++++|+ ||++... ...+ .++.++.+|+.......+.. ...+..+.. ++.
T Consensus 243 ~~i~~spdG~~l~v~~~~-~~~v---------------------~v~~~~~~g~~~~~~~~~~~--~~~~~~~~~spdg~ 298 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRG-YNTL---------------------AVFAVTADGHLTLIQQISTE--GDFPRDFDLDPTEA 298 (347)
T ss_dssp EEEEECTTSCEEEEEEET-TTEE---------------------EEEEECGGGCEEEEEEEECS--SSCCCEEEECTTSS
T ss_pred eeEEECCCCCEEEEEeCC-CCEE---------------------EEEEECCCCcEEEeEEEecC--CCCcCeEEECCCCC
Confidence 5589999997 6777654 2211 34444444543322221111 112333333 355
Q ss_pred EEEEecCCCCeEEEE
Q 019290 327 YLYTGSSVQPYVVVI 341 (343)
Q Consensus 327 ~l~i~~~~~~~i~~~ 341 (343)
.||+++...+.|.+|
T Consensus 299 ~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 299 FVVVVNQNTDNATLY 313 (347)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEEcCCCcEEEE
Confidence 699999888888877
No 57
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=1.3e-13 Score=121.59 Aligned_cols=194 Identities=11% Similarity=0.125 Sum_probs=134.9
Q ss_pred CCceEEEcCCCCeeEEEe-cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVGV-SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~-~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
.|.+++++++|+ +|++. .+++|++||+.++++..+..... ......|+++++++ +|++|+++
T Consensus 70 ~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~~~~~~~~~---------------~~~~~~~~~i~~d~-~G~l~vtd 132 (296)
T 3e5z_A 70 HQNGHCLNKQGH-LIACSHGLRRLERQREPGGEWESIADSFE---------------GKKLNSPNDVCLAP-DGSLWFSD 132 (296)
T ss_dssp SEEEEEECTTCC-EEEEETTTTEEEEECSTTCCEEEEECEET---------------TEECCCCCCEEECT-TSCEEEEE
T ss_pred CcceeeECCCCc-EEEEecCCCeEEEEcCCCCcEEEEeeccC---------------CCCCCCCCCEEECC-CCCEEEEC
Confidence 689999999999 56554 45899999997877766532110 01223578899998 89999975
Q ss_pred C------------------CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeee
Q 019290 115 A------------------YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIAT 176 (343)
Q Consensus 115 ~------------------~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~ 176 (343)
. ..+|++++++ ++++.+.. ....++++++++ ||++++++..
T Consensus 133 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-----~~~~~~gi~~s~-dg~~lv~~~~-------------- 191 (296)
T 3e5z_A 133 PTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR-----DRVKPNGLAFLP-SGNLLVSDTG-------------- 191 (296)
T ss_dssp CSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC-----CCSSEEEEEECT-TSCEEEEETT--------------
T ss_pred CccccccccccccccccCCCcEEEEECCC-CCEEEeec-----CCCCCccEEECC-CCCEEEEeCC--------------
Confidence 3 2379999988 66655432 124578999999 5876677754
Q ss_pred cCCCceEEEEeCC-CCce----EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCc
Q 019290 177 GDRSGRLLKYDPL-KKNV----TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDN 251 (343)
Q Consensus 177 ~~~~~~v~~~d~~-~~~~----~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~ 251 (343)
.+.|++++.+ ++.+ ..+......|.+++++++|. +|++. .++|.+|+.++ .....+....+ |.+
T Consensus 192 ---~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g----~~~~~~~~~~~-~~~ 260 (296)
T 3e5z_A 192 ---DNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDG----DELGRVLTPQT-TSN 260 (296)
T ss_dssp ---TTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTS----CEEEEEECSSC-CCE
T ss_pred ---CCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCC----CEEEEEECCCC-cee
Confidence 5678888865 4554 22212335688999999986 78876 68999999875 22233322233 778
Q ss_pred eee-CCCC-CEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEE
Q 019290 252 IKS-DSKG-EFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVV 304 (343)
Q Consensus 252 i~~-d~~G-~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~ 304 (343)
+++ .++| .||+++.. ++++++++.+.+
T Consensus 261 ~~f~~~d~~~L~v~t~~--------------------------~l~~~~~~~~~~ 289 (296)
T 3e5z_A 261 LCFGGPEGRTLYMTVST--------------------------EFWSIETNVRGL 289 (296)
T ss_dssp EEEESTTSCEEEEEETT--------------------------EEEEEECSCCBC
T ss_pred EEEECCCCCEEEEEcCC--------------------------eEEEEEcccccc
Confidence 888 4666 69999876 899998865543
No 58
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.61 E-value=1.2e-13 Score=137.89 Aligned_cols=233 Identities=16% Similarity=0.201 Sum_probs=146.8
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+|+.|++|+ +|+++ .++|++|++.++++..+....... ......+..+..++ +++||+++.
T Consensus 374 ~v~~i~~d~~g~-lWigt-~~GL~~~~~~~~~~~~~~~~~~~~-------------~~~~~~v~~i~~d~-~g~lWigT~ 437 (758)
T 3ott_A 374 RIRHIYEDKEQQ-LWIAT-DGSINRYDYATRQFIHYNIVDNTG-------------TYNTNWTYYIFEDT-AGQLWISTC 437 (758)
T ss_dssp CEEEEEECTTSC-EEEEE-TTEEEEEETTTTEEEEEEEECCC---------------CBSSSEEEEEECT-TSEEEEEES
T ss_pred ceEEEEECCCCC-EEEEe-CCcHhhcCcCCCcEEEeecCCCcC-------------CCCCceEEEEEEcC-CCCEEEEEC
Confidence 357899999999 89888 468999999988887774211000 00122356788887 899999976
Q ss_pred CCeEEEEeCCC------CeEE---EcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEE
Q 019290 116 YFGLMVVGPNG------GQAQ---QLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKY 186 (343)
Q Consensus 116 ~~gi~~~d~~~------~~~~---~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (343)
..||+++|+++ +.+. .+ ....+.+...+..+..|+ +|+||++... .++|+++
T Consensus 438 ~~Gl~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~i~~i~~d~-~g~lWi~~~t-----------------~~Gl~~~ 498 (758)
T 3ott_A 438 LGGIFVVDKHKLMQSTSGQYIAEQNY-SVHNGLSGMFINQIIPDN-EGNVWVLLYN-----------------NKGIDKI 498 (758)
T ss_dssp SSCEEEEEHHHHHHCCSSEEECSEEE-CGGGTCSCSCEEEEEECT-TSCEEEEETT-----------------CSSEEEE
T ss_pred CCceEEEccccccccCCcceeccccc-ccccccccceeeeEEEcC-CCCEEEEccC-----------------CCCcEEE
Confidence 67999999753 2221 11 111222334578899999 5999992211 2469999
Q ss_pred eCCCCceEEeecC-C---CCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCC----ceeeCCCC
Q 019290 187 DPLKKNVTVMYNG-L---SFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPD----NIKSDSKG 258 (343)
Q Consensus 187 d~~~~~~~~~~~~-~---~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~----~i~~d~~G 258 (343)
|+++++++.+... + ..++.+..+.+|. +|++. .++|++|+..+. ..+.+. ..++|. +++.| +|
T Consensus 499 d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-lWigt--~~Gl~~~~~~~~----~~~~~~-~~gl~~~~i~~i~~~-~g 569 (758)
T 3ott_A 499 NPRTREVTKLFADELTGEKSPNYLLCDEDGL-LWVGF--HGGVMRINPKDE----SQQSIS-FGSFSNNEILSMTCV-KN 569 (758)
T ss_dssp ETTTTEEEEECTTTSCGGGCEEEEEECTTSC-EEEEE--TTEEEEECC--C----CCCBCC-CCC---CCEEEEEEE-TT
T ss_pred eCCCCceEEecCCCcCCCcccceEEECCCCC-EEEEe--cCceEEEecCCC----ceEEec-ccCCCccceEEEEEC-CC
Confidence 9988877765322 1 2345666666664 77764 357999987652 223332 123333 34455 89
Q ss_pred CEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEE-eCCEEEEecCCCCe
Q 019290 259 EFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQE-YGEYLYTGSSVQPY 337 (343)
Q Consensus 259 ~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~i~~~~~~~ 337 (343)
+||+++.. ++.++|++...+..+..++. .+. ..+.. .+|+||+|+...
T Consensus 570 ~lWi~t~~--------------------------Gl~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~G~l~fG~~~G-- 618 (758)
T 3ott_A 570 SIWVSTTN--------------------------GLWIIDRKTMDARQQNMTNK-RFT--SLLFDPKEDCVYLGGADG-- 618 (758)
T ss_dssp EEEEEESS--------------------------CEEEEETTTCCEEEC--CCC-CCS--EEEEETTTTEEEEECBSE--
T ss_pred CEEEECCC--------------------------CeEEEcCCCceeEEecCCCC-cee--eeEEECCCCcEEEecCCc--
Confidence 99999977 89999998776666654433 122 22333 389999999765
Q ss_pred EEEEcC
Q 019290 338 VVVIKA 343 (343)
Q Consensus 338 i~~~~~ 343 (343)
+.+++|
T Consensus 619 l~~f~p 624 (758)
T 3ott_A 619 FGISHS 624 (758)
T ss_dssp EEEEEC
T ss_pred eEEECh
Confidence 666554
No 59
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.61 E-value=7.7e-13 Score=118.03 Aligned_cols=248 Identities=12% Similarity=0.068 Sum_probs=154.0
Q ss_pred ccccccCCCCCCCceEEEcCCCCeeEEEe-cCCEEEEEEcCCCCe-EEeeecCCCccccccCCCCCcccCCCcCCeee-E
Q 019290 25 SYQQLQLPGVVGPESLAFDCNGEGPYVGV-SDGRILKWKAANSGW-TEFATTAPHRAREICDGSTNTTLEPLCGRPLG-I 101 (343)
Q Consensus 25 ~~~~~~~~~~~~p~~l~~d~~g~~l~~~~-~~g~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g-i 101 (343)
....+..+ ...| +++++++|+.+|+.. .++.|+.+|..+++. .... .....|.. +
T Consensus 32 ~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~--------------------~~~~~~~~~~ 89 (331)
T 3u4y_A 32 ILNQITLG-YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI--------------------QEGQSSMADV 89 (331)
T ss_dssp EEEEEECC-CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE--------------------EECSSCCCCE
T ss_pred eeeeEEcc-CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec--------------------ccCCCCccce
Confidence 34444544 2356 999999999777554 478999999988764 2221 11123556 9
Q ss_pred EEeCCCCeEEEEeCCC----eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeee
Q 019290 102 KFNPVTCDLYIADAYF----GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIAT 176 (343)
Q Consensus 102 ~~~~~~~~l~v~~~~~----gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~ 176 (343)
+++++++.+|++ ... .|..+|.++++....... ...++++++++ ||+ +|+++...
T Consensus 90 ~~s~dg~~l~~~-~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~sp-dg~~l~~~~~~~------------- 149 (331)
T 3u4y_A 90 DITPDDQFAVTV-TGLNHPFNMQSYSFLKNKFISTIPI-----PYDAVGIAISP-NGNGLILIDRSS------------- 149 (331)
T ss_dssp EECTTSSEEEEC-CCSSSSCEEEEEETTTTEEEEEEEC-----CTTEEEEEECT-TSSCEEEEEETT-------------
T ss_pred EECCCCCEEEEe-cCCCCcccEEEEECCCCCeEEEEEC-----CCCccceEECC-CCCEEEEEecCC-------------
Confidence 999955557744 444 699999998876543322 13468999999 575 88876531
Q ss_pred cCCC-ceEEEEeCCCCce----EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCc
Q 019290 177 GDRS-GRLLKYDPLKKNV----TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDN 251 (343)
Q Consensus 177 ~~~~-~~v~~~d~~~~~~----~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~ 251 (343)
.. -.+|.++.. +.+ .........+.+++++++++.+|++....+.|.+|++.+.........+ .....|.+
T Consensus 150 --~~~i~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~ 225 (331)
T 3u4y_A 150 --ANTVRRFKIDAD-GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAV-GTNNLPGT 225 (331)
T ss_dssp --TTEEEEEEECTT-CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEE-ECSSCCCC
T ss_pred --CceEEEEEECCC-CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeec-cCCCCCce
Confidence 01 234444432 332 1222344568999999999999999988899999998752210112222 23345889
Q ss_pred eeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CCE--EEEeeCC---CCCccCCce--eEE
Q 019290 252 IKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNV--VDVLDGN---EGNTLNSVS--EVQ 322 (343)
Q Consensus 252 i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~--~~~~~~~---~~~~~~~~~--~~~ 322 (343)
++++++|+ +|++... .+.|..+|.+ ++. +..+... ......... ...
T Consensus 226 ~~~spdg~~l~v~~~~------------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 281 (331)
T 3u4y_A 226 IVVSRDGSTVYVLTES------------------------TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALN 281 (331)
T ss_dssp EEECTTSSEEEEECSS------------------------EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEEC
T ss_pred EEECCCCCEEEEEEcC------------------------CCEEEEEECCCCceeeecccccccccCCCCcccccceEEC
Confidence 99999998 7777654 2467788875 444 2222211 010111111 222
Q ss_pred EeCCEEEEecCCCCeEEEEc
Q 019290 323 EYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 323 ~~~g~l~i~~~~~~~i~~~~ 342 (343)
+++..||+++...+.|.+++
T Consensus 282 pdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 282 KTETKLFISANISRELKVFT 301 (331)
T ss_dssp TTSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEecCCCCcEEEEE
Confidence 34667999999998888876
No 60
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.60 E-value=6.5e-12 Score=112.72 Aligned_cols=233 Identities=13% Similarity=0.120 Sum_probs=152.7
Q ss_pred CCceEEEcCCCCeeEEE-ecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVG-VSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
.|.+++++++|+.+|+. ..++.|..+|..+++........... .........|.+++++++++.+|+++
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~s~dg~~l~~~~ 159 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRK----------RTEEVRPLQPRELVADDATNTVYISG 159 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCC----------CCSSCCCCEEEEEEEETTTTEEEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCc----------cccccCCCCCceEEECCCCCEEEEEe
Confidence 58999999999966654 55789999999887653322111000 00001122478899999666799986
Q ss_pred C--CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 115 A--YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 115 ~--~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
. ...|+.+|.++++........ ...++++++++++..+|+++. .+.|+.+|..+++
T Consensus 160 ~~~~~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~------------------~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 160 IGKESVIWVVDGGNIKLKTAIQNT----GKMSTGLALDSEGKRLYTTNA------------------DGELITIDTADNK 217 (353)
T ss_dssp ESSSCEEEEEETTTTEEEEEECCC----CTTCCCCEEETTTTEEEEECT------------------TSEEEEEETTTTE
T ss_pred cCCCceEEEEcCCCCceEEEecCC----CCccceEEECCCCCEEEEEcC------------------CCeEEEEECCCCe
Confidence 3 234999999988765543211 134788999994234777543 4578899998777
Q ss_pred eEEeecC-----CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEecc
Q 019290 193 VTVMYNG-----LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMNS 266 (343)
Q Consensus 193 ~~~~~~~-----~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~~ 266 (343)
....... ...+.+++++++++.+|+++...+.|++|++.+... ...+ ... .+.+++++++|+ +|++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~-~~~-~~~~~~~s~dg~~l~v~~~~ 292 (353)
T 3vgz_A 218 ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI---LAKV-AAP-ESLAVLFNPARNEAYVTHRQ 292 (353)
T ss_dssp EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE---EEEE-ECS-SCCCEEEETTTTEEEEEETT
T ss_pred EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---EEEE-EcC-CCceEEECCCCCEEEEEECC
Confidence 6533221 223567999999999999988889999999865221 1111 222 367889999997 8888765
Q ss_pred CCCccccccccccccccCCCcccCCCeEEEECCC-CCEEEEeeCCCCCccCCceeEEEe--CCEEEEecCC
Q 019290 267 ARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGNEGNTLNSVSEVQEY--GEYLYTGSSV 334 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~ 334 (343)
.+.|..+|.+ ++.+..+..+. .+..+..+ ++.||+++..
T Consensus 293 ------------------------~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 293 ------------------------AGKVSVIDAKSYKVVKTFDTPT-----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ------------------------TTEEEEEETTTTEEEEEEECCS-----EEEEEEECTTSCEEEEEEEC
T ss_pred ------------------------CCeEEEEECCCCeEEEEEecCC-----CCCeEEEcCCCCEEEEEEcc
Confidence 3478889974 66666665432 23444333 4569988765
No 61
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.60 E-value=6.9e-14 Score=125.18 Aligned_cols=185 Identities=14% Similarity=0.161 Sum_probs=126.4
Q ss_pred CCceEEEcC-CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDC-NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~-~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
.|.+|++++ +|+ +|++...++|+++|+.++.+..+..... ......|+++++++.+++|||++
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~---------------~~~~~~p~~i~~d~~~G~l~v~d 144 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVD---------------GVPFKWLYAVTVDQRTGIVYFTD 144 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEET---------------TEECSCEEEEEECTTTCCEEEEE
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCC---------------CCcccccceEEEecCCCEEEEEC
Confidence 689999997 677 7877666779999988765555532100 01234588999996467999998
Q ss_pred CC------------------CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeee
Q 019290 115 AY------------------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIA 175 (343)
Q Consensus 115 ~~------------------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~ 175 (343)
.. .+|+++|+++++++.+... ...++++++++ +|+ +|+++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-----~~~p~gia~~~-dg~~lyv~d~~------------- 205 (322)
T 2fp8_A 145 VSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-----LHVPGGAEVSA-DSSFVLVAEFL------------- 205 (322)
T ss_dssp SCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-----ESCCCEEEECT-TSSEEEEEEGG-------------
T ss_pred CcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-----CccCcceEECC-CCCEEEEEeCC-------------
Confidence 54 3499999988877655321 35689999999 564 9998865
Q ss_pred ecCCCceEEEEeCCC---CceEEeecCCCCcceeEEecCCCEEEEEEcC----------CCeEEEEEccCccccccceee
Q 019290 176 TGDRSGRLLKYDPLK---KNVTVMYNGLSFPNGVALSNNNSFLLLAESA----------TLKILRFWLQGERTTYTPQLF 242 (343)
Q Consensus 176 ~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~----------~~~i~~~~~~~~~~~~~~~~~ 242 (343)
.++|++|+.++ +..+.+.. ...|.+++++++|. +|++... .++|++++.++. ....+
T Consensus 206 ----~~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~----~~~~~ 275 (322)
T 2fp8_A 206 ----SHQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGN----ILEVI 275 (322)
T ss_dssp ----GTEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSC----EEEEE
T ss_pred ----CCeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCC----EEEEE
Confidence 46799998764 23333332 22399999999886 8888754 467999987652 22233
Q ss_pred ecCC----CCCCceeeCCCCCEEEEecc
Q 019290 243 AEMP----RFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 243 ~~~~----~~p~~i~~d~~G~lwi~~~~ 266 (343)
.... ..+.+++. .+|+|||++..
T Consensus 276 ~~~~g~~~~~~~~~~~-~~g~L~v~~~~ 302 (322)
T 2fp8_A 276 PLPPPFAGEHFEQIQE-HDGLLYIGTLF 302 (322)
T ss_dssp ECCTTTTTSCCCEEEE-ETTEEEEECSS
T ss_pred ECCCCCccccceEEEE-eCCEEEEeecC
Confidence 2211 23555555 47899999866
No 62
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.58 E-value=3.3e-13 Score=118.95 Aligned_cols=206 Identities=11% Similarity=0.081 Sum_probs=131.5
Q ss_pred ccccCC-CCCCCceEEEcCCCCeeEEEe-cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE-
Q 019290 27 QQLQLP-GVVGPESLAFDCNGEGPYVGV-SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF- 103 (343)
Q Consensus 27 ~~~~~~-~~~~p~~l~~d~~g~~l~~~~-~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~- 103 (343)
..|.++ ....||++.+|++...+|++. .+++|.++++.++...++.. +... ..| .....+.||.+
T Consensus 4 ~~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~-~~~s----~~g-------~~~~~~sGl~~~ 71 (334)
T 2p9w_A 4 DQIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVI-DGAS----SNG-------DGEQQMSGLSLL 71 (334)
T ss_dssp SEEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECC-TTTC----CSS-------CCSEEEEEEEES
T ss_pred ceEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEec-CCcc----ccC-------CCcceeeEEEEe
Confidence 345555 223799999998655577554 78999999998766555421 1000 000 11124679999
Q ss_pred --eCCCCeEEEE-eC-------------CCeEEEEeCC---CCeEEEccccc---C------CCCccCcceeEEeCCCCe
Q 019290 104 --NPVTCDLYIA-DA-------------YFGLMVVGPN---GGQAQQLASSA---G------GIPFRFTNDLDIDPNTGI 155 (343)
Q Consensus 104 --~~~~~~l~v~-~~-------------~~gi~~~d~~---~~~~~~~~~~~---~------~~~~~~~~~i~~d~~dg~ 155 (343)
++ +++||++ +. ...|.++|+. +++........ . +.....++++++|+ +|+
T Consensus 72 ~~D~-~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~Gn 149 (334)
T 2p9w_A 72 THDN-SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGN 149 (334)
T ss_dssp SSSS-CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSC
T ss_pred ccCC-CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCC
Confidence 67 6999984 31 2459999998 66654433221 0 11224589999999 599
Q ss_pred EEEEeCCcccccccceeeeeecCCC-ceEEEEeCCCCceEEee------cCCCCcceeEEecCCCEEEEEEcCCCeEEEE
Q 019290 156 VYFTDSSIYFQRRQYFMSIATGDRS-GRLLKYDPLKKNVTVMY------NGLSFPNGVALSNNNSFLLLAESATLKILRF 228 (343)
Q Consensus 156 l~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~d~~~~~~~~~~------~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~ 228 (343)
.|+++.. . +.|+++++++.....+. .....++||+++|++..|++.++ .++|++|
T Consensus 150 aYVt~s~-----------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~f 211 (334)
T 2p9w_A 150 SYVAFAL-----------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAF 211 (334)
T ss_dssp EEEEEEE-----------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEE
T ss_pred EEEeCCC-----------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEE
Confidence 9998764 4 67999999865444332 11234789999999999999988 9999999
Q ss_pred EccCccccccceee--e---cCCCCCCce-eeCCCCCE-EEEecc
Q 019290 229 WLQGERTTYTPQLF--A---EMPRFPDNI-KSDSKGEF-WIAMNS 266 (343)
Q Consensus 229 ~~~~~~~~~~~~~~--~---~~~~~p~~i-~~d~~G~l-wi~~~~ 266 (343)
++..... .++..- - ... .+++| ....+|++ +++...
T Consensus 212 D~~~pv~-~~v~~~~~G~~~~~~-~~dgilp~~~~G~vllV~~~~ 254 (334)
T 2p9w_A 212 DVSKPYA-WPEPVKINGDFGTLS-GTEKIVTVPVGNESVLVGARA 254 (334)
T ss_dssp ECSSSSC-CCEECEESSCCCCCT-TEEEEEEEEETTEEEEEEEET
T ss_pred cCCCCcc-eeecccccCCccccc-CcccccccccCCEEEEEEcCC
Confidence 9874211 011110 0 122 36775 55678887 666543
No 63
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.58 E-value=1.5e-12 Score=116.03 Aligned_cols=210 Identities=12% Similarity=0.126 Sum_probs=136.2
Q ss_pred EEEcCCCCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCe
Q 019290 40 LAFDCNGEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFG 118 (343)
Q Consensus 40 l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~g 118 (343)
.++. +|. +|+++.+++|+.+|+. ++.. .+.. .......+.+++ ++.||+++...+
T Consensus 103 ~~~~-~~~-l~v~t~~~~l~~~d~~-g~~~~~~~~--------------------~~~~~~~~~~~~-~g~l~vgt~~~~ 158 (330)
T 3hxj_A 103 FTIF-EDI-LYVTSMDGHLYAINTD-GTEKWRFKT--------------------KKAIYATPIVSE-DGTIYVGSNDNY 158 (330)
T ss_dssp EEEE-TTE-EEEECTTSEEEEECTT-SCEEEEEEC--------------------SSCCCSCCEECT-TSCEEEECTTSE
T ss_pred ceEE-CCE-EEEEecCCEEEEEcCC-CCEEEEEcC--------------------CCceeeeeEEcC-CCEEEEEcCCCE
Confidence 3344 555 8988888999999988 4322 2210 011123456776 789999965578
Q ss_pred EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE-Eee
Q 019290 119 LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT-VMY 197 (343)
Q Consensus 119 i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~ 197 (343)
|+.+|++ ++........ ...+..+++|+ +|.+|++. ++|+++|. +++.. ...
T Consensus 159 l~~~d~~-g~~~~~~~~~----~~~~~~~~~d~-~g~l~v~t--------------------~~l~~~d~-~g~~~~~~~ 211 (330)
T 3hxj_A 159 LYAINPD-GTEKWRFKTN----DAITSAASIGK-DGTIYFGS--------------------DKVYAINP-DGTEKWNFY 211 (330)
T ss_dssp EEEECTT-SCEEEEEECS----SCCCSCCEECT-TCCEEEES--------------------SSEEEECT-TSCEEEEEC
T ss_pred EEEECCC-CCEeEEEecC----CCceeeeEEcC-CCEEEEEe--------------------CEEEEECC-CCcEEEEEc
Confidence 9999998 6554322211 13467788988 59999955 36899994 44432 333
Q ss_pred cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcccccccc
Q 019290 198 NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNKKT 277 (343)
Q Consensus 198 ~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~ 277 (343)
........+++++++ .+|++. .++.|++++.++. ....+......+..+++|++|+||+++..
T Consensus 212 ~~~~~~~~~~~~~~g-~l~v~t-~~~gl~~~~~~g~----~~~~~~~~~~~~~~~~~~~~g~l~v~t~~----------- 274 (330)
T 3hxj_A 212 AGYWTVTRPAISEDG-TIYVTS-LDGHLYAINPDGT----EKWRFKTGKRIESSPVIGNTDTIYFGSYD----------- 274 (330)
T ss_dssp CSSCCCSCCEECTTS-CEEEEE-TTTEEEEECTTSC----EEEEEECSSCCCSCCEECTTSCEEEECTT-----------
T ss_pred cCCcceeceEECCCC-eEEEEc-CCCeEEEECCCCC----EeEEeeCCCCccccceEcCCCeEEEecCC-----------
Confidence 233446677887776 477765 4678999975442 22222222334556788999999999875
Q ss_pred ccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEE-eCCEEEEecCCC
Q 019290 278 AFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQE-YGEYLYTGSSVQ 335 (343)
Q Consensus 278 ~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~i~~~~~ 335 (343)
++|+++|++|+.+..+..+.. .+..+.. .+|+||+++...
T Consensus 275 --------------ggl~~~d~~g~~~~~~~~~~~----~~~~~~~d~~g~l~~gt~~G 315 (330)
T 3hxj_A 275 --------------GHLYAINPDGTEKWNFETGSW----IIATPVIDENGTIYFGTRNG 315 (330)
T ss_dssp --------------CEEEEECTTSCEEEEEECSSC----CCSCCEECTTCCEEEECTTS
T ss_pred --------------CCEEEECCCCcEEEEEEcCCc----cccceEEcCCCEEEEEcCCC
Confidence 489999999888777665322 3344444 589999998765
No 64
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=4e-13 Score=119.02 Aligned_cols=186 Identities=15% Similarity=0.194 Sum_probs=126.4
Q ss_pred CCCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEe-eecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 35 VGPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEF-ATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 35 ~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
..|.+++++++ |+ +|++...++|+++|++ +++..+ ..... ......|.++++++ ++++|+
T Consensus 71 ~~~~~i~~~~~~g~-l~v~~~~~~l~~~d~~-g~~~~~~~~~~~---------------~~~~~~~~~i~~d~-~g~l~v 132 (314)
T 1pjx_A 71 GIPAGCQCDRDANQ-LFVADMRLGLLVVQTD-GTFEEIAKKDSE---------------GRRMQGCNDCAFDY-EGNLWI 132 (314)
T ss_dssp CCEEEEEECSSSSE-EEEEETTTEEEEEETT-SCEEECCSBCTT---------------SCBCBCCCEEEECT-TSCEEE
T ss_pred CCCceEEEecCCCc-EEEEECCCCEEEEeCC-CCEEEEEeccCC---------------CccccCCcCEEECC-CCCEEE
Confidence 36899999999 77 7776666689999988 666544 21100 01123578999998 889999
Q ss_pred EeCC----------------CeEEEEeCCCCeEEEcccccCCCCccCcceeEEe----CCCC-eEEEEeCCcccccccce
Q 019290 113 ADAY----------------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDID----PNTG-IVYFTDSSIYFQRRQYF 171 (343)
Q Consensus 113 ~~~~----------------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d----~~dg-~l~v~~~~~~~~~~~~~ 171 (343)
++.. .+|++++++ ++++.+... ...+++++++ + +| .+|+++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~-----~~~~~~i~~~~~~d~-dg~~l~v~~~~--------- 196 (314)
T 1pjx_A 133 TAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA-----FQFPNGIAVRHMNDG-RPYQLIVAETP--------- 196 (314)
T ss_dssp EECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE-----ESSEEEEEEEECTTS-CEEEEEEEETT---------
T ss_pred EecCcccccccccccccCCCCeEEEECCC-CCEEEeccC-----CCCcceEEEecccCC-CCCEEEEEECC---------
Confidence 9764 369999987 666554221 2346889999 8 57 68998754
Q ss_pred eeeeecCCCceEEEEeCC-CCceE---Eee--c-CC-CCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee
Q 019290 172 MSIATGDRSGRLLKYDPL-KKNVT---VMY--N-GL-SFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA 243 (343)
Q Consensus 172 ~~~~~~~~~~~v~~~d~~-~~~~~---~~~--~-~~-~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (343)
.++|++++.+ +++.. .+. . .. ..+.+++++++|. +|++....++|.+|+.++.. ....+.
T Consensus 197 --------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~---~~~~~~ 264 (314)
T 1pjx_A 197 --------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQ---PKMRIR 264 (314)
T ss_dssp --------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBS---CSEEEE
T ss_pred --------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCc---EeEEEe
Confidence 4678888864 34321 111 1 11 4588999999885 88887778899999976311 112222
Q ss_pred cCCCCCCceeeCCCCC-EEEEecc
Q 019290 244 EMPRFPDNIKSDSKGE-FWIAMNS 266 (343)
Q Consensus 244 ~~~~~p~~i~~d~~G~-lwi~~~~ 266 (343)
.....|.+++++++|+ ||+++..
T Consensus 265 ~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 265 CPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCceeEEECCCCCEEEEEeCC
Confidence 1224577889999998 9999876
No 65
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=1.1e-13 Score=123.82 Aligned_cols=197 Identities=10% Similarity=0.121 Sum_probs=132.2
Q ss_pred CeeeEEEeCCCCeEEEEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeee
Q 019290 97 RPLGIKFNPVTCDLYIADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIA 175 (343)
Q Consensus 97 ~p~gi~~~~~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~ 175 (343)
.+.++++++ +++||+++.. .+|+++|+++++++.+.... ...+.++++++ +|++|+++...
T Consensus 46 ~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~~~i~~~~-dg~l~v~~~~~------------ 107 (333)
T 2dg1_A 46 QLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSH----KANPAAIKIHK-DGRLFVCYLGD------------ 107 (333)
T ss_dssp CEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECS----SSSEEEEEECT-TSCEEEEECTT------------
T ss_pred cccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCC----CCCcceEEECC-CCcEEEEeCCC------------
Confidence 467899998 7889987654 45999999988877653211 24588999999 59999987541
Q ss_pred ecCCCceEEEEeCCCCceEEeec---CCCCcceeEEecCCCEEEEEEcC------CCeEEEEEccCccccccceeeecCC
Q 019290 176 TGDRSGRLLKYDPLKKNVTVMYN---GLSFPNGVALSNNNSFLLLAESA------TLKILRFWLQGERTTYTPQLFAEMP 246 (343)
Q Consensus 176 ~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~i~~~~d~~~lyv~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~ 246 (343)
....++|+++|++++....+.. ....+++++++++++ +|++... .+.|++++.++ .+...+....
T Consensus 108 -~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~ 181 (333)
T 2dg1_A 108 -FKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDF----RTVTPIIQNI 181 (333)
T ss_dssp -SSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTS----CCEEEEEEEE
T ss_pred -CCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCC----CEEEEeecCC
Confidence 0012579999998877653332 234578999999885 7777653 46899998765 2222332222
Q ss_pred CCCCceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECC--CCCEEEEe-----eCCCCCccCCc
Q 019290 247 RFPDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV--NGNVVDVL-----DGNEGNTLNSV 318 (343)
Q Consensus 247 ~~p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~--~g~~~~~~-----~~~~~~~~~~~ 318 (343)
..|.+++++++|+ +|+++.. .+.|++++. +++.+..+ ....+ ...+
T Consensus 182 ~~~~~i~~~~dg~~l~v~~~~------------------------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~--~~~~ 235 (333)
T 2dg1_A 182 SVANGIALSTDEKVLWVTETT------------------------ANRLHRIALEDDGVTIQPFGATIPYYFTG--HEGP 235 (333)
T ss_dssp SSEEEEEECTTSSEEEEEEGG------------------------GTEEEEEEECTTSSSEEEEEEEEEEECCS--SSEE
T ss_pred CcccceEECCCCCEEEEEeCC------------------------CCeEEEEEecCCCcCcccccceEEEecCC--CCCC
Confidence 2477899999996 8998765 247778876 45433221 11111 1234
Q ss_pred eeEEEe-CCEEEEecCCCCeEEEEcC
Q 019290 319 SEVQEY-GEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 319 ~~~~~~-~g~l~i~~~~~~~i~~~~~ 343 (343)
..+..+ +|+||+++...+.|.++++
T Consensus 236 ~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 236 DSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CceEECCCCCEEEEEcCCCEEEEECC
Confidence 455555 7899999988888998874
No 66
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.56 E-value=1.4e-11 Score=112.39 Aligned_cols=241 Identities=13% Similarity=0.179 Sum_probs=163.4
Q ss_pred cccccCCCCCCCceEEEcCCCCeeE-EEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEe
Q 019290 26 YQQLQLPGVVGPESLAFDCNGEGPY-VGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFN 104 (343)
Q Consensus 26 ~~~~~~~~~~~p~~l~~d~~g~~l~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (343)
.+.+.... .|.+++++++|+.+| ++..++.|..||..+++...... ....+.+++++
T Consensus 25 ~~~~~~~~--~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--------------------~~~~v~~~~~s 82 (391)
T 1l0q_A 25 TATIPVGS--NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--------------------AGSSPQGVAVS 82 (391)
T ss_dssp EEEEECSS--SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--------------------CSSSEEEEEEC
T ss_pred EEEeecCC--CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--------------------CCCCccceEEC
Confidence 34444333 589999999999765 45578999999998765443221 11257899999
Q ss_pred CCCCeEEEEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCce
Q 019290 105 PVTCDLYIADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 105 ~~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
++++.||++... ..|+.+|.++++........ ..+.++++++ +|+ +|++... .+.
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~-dg~~l~~~~~~-----------------~~~ 139 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-----KSPLGLALSP-DGKKLYVTNNG-----------------DKT 139 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-----SSEEEEEECT-TSSEEEEEETT-----------------TTE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-----CCcceEEECC-CCCEEEEEeCC-----------------CCE
Confidence 955668888655 45999999988765443221 3468899999 465 7676643 567
Q ss_pred EEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EE
Q 019290 183 LLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FW 261 (343)
Q Consensus 183 v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lw 261 (343)
|+.+|..+++..........+..++++++++.+|++...++.|+.|++.... ..........+.+++++++|+ +|
T Consensus 140 v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~g~~l~ 215 (391)
T 1l0q_A 140 VSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS----VIDTVKVEAAPSGIAVNPEGTKAY 215 (391)
T ss_dssp EEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEEEEECSSEEEEEEECTTSSEEE
T ss_pred EEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe----EEEEEecCCCccceEECCCCCEEE
Confidence 9999988777665554456678999999999999988888999999986522 111122233466788999985 66
Q ss_pred EEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CCEEEEeeCCCCCccCCceeEEEe--CCEEEEecCCCCeE
Q 019290 262 IAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGNEGNTLNSVSEVQEY--GEYLYTGSSVQPYV 338 (343)
Q Consensus 262 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i 338 (343)
++... .. .+.|..+|.+ ++.+..+.... .+..+... +..||++....+.|
T Consensus 216 ~~~~~-~~---------------------~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v 268 (391)
T 1l0q_A 216 VTNVD-KY---------------------FNTVSMIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTV 268 (391)
T ss_dssp EEEEC-SS---------------------CCEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEecC-cC---------------------CCcEEEEECCCCeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEE
Confidence 66541 01 2478888874 55555554322 23333333 55788888877888
Q ss_pred EEEc
Q 019290 339 VVIK 342 (343)
Q Consensus 339 ~~~~ 342 (343)
.+++
T Consensus 269 ~v~d 272 (391)
T 1l0q_A 269 SVID 272 (391)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8776
No 67
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.55 E-value=5e-12 Score=112.73 Aligned_cols=235 Identities=14% Similarity=0.095 Sum_probs=149.8
Q ss_pred EEEcCCCCeeE-EEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC-C
Q 019290 40 LAFDCNGEGPY-VGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY-F 117 (343)
Q Consensus 40 l~~d~~g~~l~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~-~ 117 (343)
.+++.+++.+| +...++.|..+|..+++...... .....+ +++++++++.+|++... .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-------------------~~~~~~-~~~~s~dg~~l~~~~~~~~ 62 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT-------------------LGYDFV-DTAITSDCSNVVVTSDFCQ 62 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE-------------------CCCCEE-EEEECSSSCEEEEEESTTC
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE-------------------ccCCcc-eEEEcCCCCEEEEEeCCCC
Confidence 45666666556 55678899999998876644321 112235 89999955569998764 4
Q ss_pred eEEEEeCCCCeE-EEcccccCCCCccCcce-eEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 118 GLMVVGPNGGQA-QQLASSAGGIPFRFTND-LDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 118 gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~-i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
.|+.+|+++++. ....... ..+.. +++++ +|+.+++... ....+.|+.+|.++++...
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~s~-dg~~l~~~~~--------------~~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEG-----QSSMADVDITP-DDQFAVTVTG--------------LNHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp EEEEEECSSSSCEEEEEEEC-----SSCCCCEEECT-TSSEEEECCC--------------SSSSCEEEEEETTTTEEEE
T ss_pred eEEEEECCCCceeEEecccC-----CCCccceEECC-CCCEEEEecC--------------CCCcccEEEEECCCCCeEE
Confidence 599999998875 3222211 23556 99999 5764443332 0011279999998887665
Q ss_pred eecCCCCcceeEEecCCCEEEEEEcCCCe-EEEEEccCccccccc-eeeecCCCCCCceeeCCCCC-EEEEeccCCCccc
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLAESATLK-ILRFWLQGERTTYTP-QLFAEMPRFPDNIKSDSKGE-FWIAMNSARGKIE 272 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~~~~~~~-i~~~~~~~~~~~~~~-~~~~~~~~~p~~i~~d~~G~-lwi~~~~~~~~~~ 272 (343)
.......+.+++++|+++.+|+++...+. |.+|+++.+..+... .........|.+++++++|+ +|++...
T Consensus 123 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~------ 196 (331)
T 3u4y_A 123 TIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI------ 196 (331)
T ss_dssp EEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT------
T ss_pred EEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC------
Confidence 55555678999999999999999887777 999988753321111 11112233478899999997 8888765
Q ss_pred cccccccccccCCCcccCCCeEEEECC-CCCE---EEEeeCCCCCccCCceeEEE--eCCEEEEecCCCCeEEEEcC
Q 019290 273 SNKKTAFCEETAKPWFLRDPVGVKFDV-NGNV---VDVLDGNEGNTLNSVSEVQE--YGEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~---~~~~~~~~~~~~~~~~~~~~--~~g~l~i~~~~~~~i~~~~~ 343 (343)
.+.|..+|. +++. +..+... ..+..+.. ++..||+++...+.|.+++.
T Consensus 197 ------------------~~~v~v~d~~~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 197 ------------------GNSIGILETQNPENITLLNAVGTN-----NLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp ------------------TTEEEEEECSSTTSCEEEEEEECS-----SCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred ------------------CCeEEEEECCCCcccceeeeccCC-----CCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 346777886 4565 5555432 12233333 34558998888888888763
No 68
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.55 E-value=5.2e-13 Score=124.35 Aligned_cols=203 Identities=9% Similarity=0.034 Sum_probs=139.0
Q ss_pred CcCCeeeEEEeC-CCCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccce
Q 019290 94 LCGRPLGIKFNP-VTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYF 171 (343)
Q Consensus 94 ~~~~p~gi~~~~-~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~ 171 (343)
.+..|.++++++ .+++||+++....|+++|+++++++.+.. ....|.++++|+ +|+ ||+++.+..
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-----~~~~P~~ia~d~-~G~~lyvad~~~~------- 201 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-----GLSKVRTICWTH-EADSMIITNDQNN------- 201 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-----CCSCEEEEEECT-TSSEEEEEECCSC-------
T ss_pred CCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-----CCCCcceEEEeC-CCCEEEEEeCCCC-------
Confidence 356799999996 37899999876669999999888776643 235689999999 476 999987420
Q ss_pred eeeeecCCCceEEEEeCCCCce-EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC--CCC
Q 019290 172 MSIATGDRSGRLLKYDPLKKNV-TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM--PRF 248 (343)
Q Consensus 172 ~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~ 248 (343)
.....++.++.++... ......+..|.+++++++++.||+++...++|++++.++. ....+... ...
T Consensus 202 ------~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~----~~~~~~~~~~~~~ 271 (430)
T 3tc9_A 202 ------NDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ----ETTPLFTIQDSGW 271 (430)
T ss_dssp ------TTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT----EEEEEEECSSSSC
T ss_pred ------cccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC----cEEEEEEcCCCCc
Confidence 1122466676553221 1222346789999999966679999999999999998752 22122222 235
Q ss_pred CCceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCC--EE----EEeeCC--CC-------
Q 019290 249 PDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGN--VV----DVLDGN--EG------- 312 (343)
Q Consensus 249 p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~--~~----~~~~~~--~~------- 312 (343)
|.++++|++|+ ||+++.. .+.|++++.++. .+ .....+ .+
T Consensus 272 P~gia~~pdG~~lyv~d~~------------------------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~ 327 (430)
T 3tc9_A 272 EFHIQFHPSGNYAYIVVVN------------------------QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGK 327 (430)
T ss_dssp CEEEEECTTSSEEEEEETT------------------------TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGG
T ss_pred ceeEEEcCCCCEEEEEECC------------------------CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCc
Confidence 89999999998 9999876 457888876642 21 122111 11
Q ss_pred -CccCCce-eEEE---------eCCEEEEecCCCCeEEEEcC
Q 019290 313 -NTLNSVS-EVQE---------YGEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 313 -~~~~~~~-~~~~---------~~g~l~i~~~~~~~i~~~~~ 343 (343)
..+..+. .+.. .+|+||++....++|.++++
T Consensus 328 ~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~ 369 (430)
T 3tc9_A 328 KARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP 369 (430)
T ss_dssp GCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT
T ss_pred ceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC
Confidence 1233344 4443 24899999999999999864
No 69
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.54 E-value=1.3e-12 Score=118.49 Aligned_cols=268 Identities=14% Similarity=0.128 Sum_probs=153.7
Q ss_pred CCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC---CCe
Q 019290 33 GVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV---TCD 109 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~~~ 109 (343)
++..|.+|+++++|+.+|+....|+|+++++++.....+...+ .........+.+|+++++ ++.
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~-------------~v~~~g~~g~~gia~~pdf~~~g~ 82 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVP-------------DVWAHGQGGLLDVVLAPDFAQSRR 82 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCC-------------CCCCSTTCSEEEEEECTTHHHHCE
T ss_pred CCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCc-------------ccccCCCCCceeEEECCCCCCCCE
Confidence 4668999999999984566667899999986542111121100 011122345789999984 689
Q ss_pred EEEEeCC--------CeEEEEeCCCC--e---EEEcccccC--CCCccCcceeEEeCCCCeEEEEeCCcccccccceeee
Q 019290 110 LYIADAY--------FGLMVVGPNGG--Q---AQQLASSAG--GIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSI 174 (343)
Q Consensus 110 l~v~~~~--------~gi~~~d~~~~--~---~~~~~~~~~--~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~ 174 (343)
||++... +.|.+++.+.+ + .+.+..... .......++|++++ ||.||++..........+
T Consensus 83 lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q---- 157 (353)
T 2g8s_A 83 IWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQ---- 157 (353)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGG----
T ss_pred EEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccC----
Confidence 9999643 34888876432 2 222222211 11234578999999 699999974321100000
Q ss_pred eecCCCceEEEEeCCCC-------------ceEEeecCCCCcceeEEecCCCEEEEEEcCCC---eEEEEEccCcc----
Q 019290 175 ATGDRSGRLLKYDPLKK-------------NVTVMYNGLSFPNGVALSNNNSFLLLAESATL---KILRFWLQGER---- 234 (343)
Q Consensus 175 ~~~~~~~~v~~~d~~~~-------------~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~---~i~~~~~~~~~---- 234 (343)
......++|+|+++++. ..+.+..++..|.+++++++...||+++.... .|.++...++.
T Consensus 158 ~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~ 237 (353)
T 2g8s_A 158 DLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPL 237 (353)
T ss_dssp CTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTT
T ss_pred CCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCC
Confidence 00112468999998753 23445567788999999996667999987532 45444322210
Q ss_pred -c---------c--------ccc-eeeec--CCCCCCceeeCC-------CCCEEEEeccCCCccccccccccccccCCC
Q 019290 235 -T---------T--------YTP-QLFAE--MPRFPDNIKSDS-------KGEFWIAMNSARGKIESNKKTAFCEETAKP 286 (343)
Q Consensus 235 -~---------~--------~~~-~~~~~--~~~~p~~i~~d~-------~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~ 286 (343)
. . ... ..... ....|.++++.. +|++|+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~-------------------- 297 (353)
T 2g8s_A 238 ATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALK-------------------- 297 (353)
T ss_dssp BCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETT--------------------
T ss_pred ccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEcc--------------------
Confidence 0 0 000 00000 001255666643 5889999876
Q ss_pred cccCCCeEEEECCCC-CEEEEeeCCCCCccCCceeEEEe-CCEEEEec-CCCCeEEEEcC
Q 019290 287 WFLRDPVGVKFDVNG-NVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGS-SVQPYVVVIKA 343 (343)
Q Consensus 287 ~~~~~~~v~~~d~~g-~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~-~~~~~i~~~~~ 343 (343)
.+.|.+++.++ +.......-.. ....+..+... +|.||+++ ..+.+|+|+.+
T Consensus 298 ----~~~v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 298 ----DKDVIVMSVNGDKVTEDGRILTD-RGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp ----TTEEEEEEEETTEEEEEEEESGG-GCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred ----CCEEEEEEeCCCeEeeeEEcccC-CCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 34677776543 33222111111 12245555555 88999975 46788999864
No 70
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=5.9e-13 Score=124.55 Aligned_cols=213 Identities=11% Similarity=0.035 Sum_probs=142.4
Q ss_pred CcCCeeeEEEeC-CCCeEEEEeCC-CeEEEEeCCCCeEEEcccccCCCCccCcceeEE-------eCCCCe-EEEEeCCc
Q 019290 94 LCGRPLGIKFNP-VTCDLYIADAY-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDI-------DPNTGI-VYFTDSSI 163 (343)
Q Consensus 94 ~~~~p~gi~~~~-~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~-------d~~dg~-l~v~~~~~ 163 (343)
.+..|.+|++++ .+++||+++.. .+|+++|++++.++.+..... ..+..|+++++ ++ +|+ ||+++...
T Consensus 137 ~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~ 214 (496)
T 3kya_A 137 GFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT-IPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYD 214 (496)
T ss_dssp CCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT-SSCSBEEEEEECCCBTTTBC-TTCEEEEEECCC
T ss_pred ccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc-cccCCCcEEEEeecccccCC-CCCEEEEEeCCC
Confidence 355799999997 36899999764 459999999999888765322 23567999999 98 465 99998752
Q ss_pred ccccccceeeeeecCCCceEEEEeCCC-CceE-----EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEcc------
Q 019290 164 YFQRRQYFMSIATGDRSGRLLKYDPLK-KNVT-----VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQ------ 231 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~-----~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~------ 231 (343)
... .....|+.++... +.+. .....+..|++++++++++.||+++...++|++++++
T Consensus 215 ~~~-----------~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~ 283 (496)
T 3kya_A 215 GKG-----------DESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTI 283 (496)
T ss_dssp TTG-----------GGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHH
T ss_pred CCc-----------ccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccc
Confidence 000 0023477776543 3331 1223467899999999888899999999999999987
Q ss_pred -Ccccc----cc----ceeeec--CCCCCCceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECC
Q 019290 232 -GERTT----YT----PQLFAE--MPRFPDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV 299 (343)
Q Consensus 232 -~~~~~----~~----~~~~~~--~~~~p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 299 (343)
+.... .. .+.+.. ....|.++++|++|+ |||++.. .+.|++++.
T Consensus 284 ~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~------------------------~h~I~kid~ 339 (496)
T 3kya_A 284 KNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN------------------------NHYFMRSDY 339 (496)
T ss_dssp HTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT------------------------TTEEEEEEE
T ss_pred cCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC------------------------CCEEEEEec
Confidence 21100 00 112222 223578899999998 8999977 468888776
Q ss_pred CCC--EE---EEe-eCC------CC----CccCCce-eEEE--------eCCEEEEecCCCCeEEEEcC
Q 019290 300 NGN--VV---DVL-DGN------EG----NTLNSVS-EVQE--------YGEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 300 ~g~--~~---~~~-~~~------~~----~~~~~~~-~~~~--------~~g~l~i~~~~~~~i~~~~~ 343 (343)
++. .+ ..+ ..+ ++ ..+..+. .+.. ..|+|||+....++|.++++
T Consensus 340 dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~ 408 (496)
T 3kya_A 340 DEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP 408 (496)
T ss_dssp ETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT
T ss_pred CCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC
Confidence 542 22 122 211 11 1334455 4444 35799999999999999874
No 71
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.54 E-value=1.1e-12 Score=122.12 Aligned_cols=203 Identities=13% Similarity=0.011 Sum_probs=138.3
Q ss_pred CcCCeeeEEEeCC--CCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccce
Q 019290 94 LCGRPLGIKFNPV--TCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYF 171 (343)
Q Consensus 94 ~~~~p~gi~~~~~--~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~ 171 (343)
.+..|.+++++++ +++||+++..+.|++++++++++..+.. ....|+++++|+ +|+||+++....
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-----~~~~P~giavd~-dG~lyVad~~~~------- 203 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-----NIGQCADVNFTL-NGDMVVVDDQSS------- 203 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-----CCSCEEEEEECT-TCCEEEEECCSC-------
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-----CCCCccEEEECC-CCCEEEEcCCCC-------
Confidence 4567999999972 5899999866679999998898887643 235689999999 588999986410
Q ss_pred eeeeecCCCceEEEEeCCCCce-EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccc-eeeec--CCC
Q 019290 172 MSIATGDRSGRLLKYDPLKKNV-TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTP-QLFAE--MPR 247 (343)
Q Consensus 172 ~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~-~~~~~--~~~ 247 (343)
....+++.++..++.. ......+..|++++++++.+.||+++..+++|++++.++ +.. ..+.. ...
T Consensus 204 ------~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~----g~~~~~~~~~~~~~ 273 (433)
T 4hw6_A 204 ------DTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT----GTLTEEEVMMDTKG 273 (433)
T ss_dssp ------TTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT----CCEEEEEEECSCCS
T ss_pred ------cccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC----CeEEEEEeccCCCC
Confidence 0023466676543321 112235678999999995667999999899999999863 222 12222 122
Q ss_pred CCCceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCC--CE----EEEeeCC--CC------
Q 019290 248 FPDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNG--NV----VDVLDGN--EG------ 312 (343)
Q Consensus 248 ~p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g--~~----~~~~~~~--~~------ 312 (343)
.+.++++|++|+ ||+++.. .+.|++++.++ .. ......+ .+
T Consensus 274 ~~~~ia~dpdG~~LYvad~~------------------------~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~ 329 (433)
T 4hw6_A 274 SNFHIVWHPTGDWAYIIYNG------------------------KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMG 329 (433)
T ss_dssp SCEEEEECTTSSEEEEEETT------------------------TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEG
T ss_pred CcccEEEeCCCCEEEEEeCC------------------------CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcc
Confidence 345699999997 9999876 45788876542 21 1122111 11
Q ss_pred --CccCCceeEEE----------eCCEEEEecCCCCeEEEEcC
Q 019290 313 --NTLNSVSEVQE----------YGEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 313 --~~~~~~~~~~~----------~~g~l~i~~~~~~~i~~~~~ 343 (343)
..+..+..+.. .+|+||++....++|.++++
T Consensus 330 ~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 330 TGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp GGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred cceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 12344555554 48899999999999999874
No 72
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=2.8e-12 Score=113.29 Aligned_cols=190 Identities=8% Similarity=-0.001 Sum_probs=129.5
Q ss_pred CeeeEEEeCCCCeEEEEeCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeee
Q 019290 97 RPLGIKFNPVTCDLYIADAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIA 175 (343)
Q Consensus 97 ~p~gi~~~~~~~~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~ 175 (343)
-+.|..++++++.||+++... .|+++|+++++.+.+.. . ..+..+++++ +|++|++..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~-----~~~~~i~~~~-dG~l~v~~~-------------- 72 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTM-D-----APVSSVALRQ-SGGYVATIG-------------- 72 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC-S-----SCEEEEEEBT-TSSEEEEET--------------
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeC-C-----CceEEEEECC-CCCEEEEEC--------------
Confidence 467888998678999998654 59999999887654421 1 3578999999 599999662
Q ss_pred ecCCCceEEEEeCCCCceEEeecC-----CCCcceeEEecCCCEEEEEEc-----------CCCeEEEEEccCccccccc
Q 019290 176 TGDRSGRLLKYDPLKKNVTVMYNG-----LSFPNGVALSNNNSFLLLAES-----------ATLKILRFWLQGERTTYTP 239 (343)
Q Consensus 176 ~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~~~i~~~~d~~~lyv~~~-----------~~~~i~~~~~~~~~~~~~~ 239 (343)
.+|+++|+++++.+.+... ...+++++++++|+ +|+++. ..+.|++++.++. .
T Consensus 73 -----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-----~ 141 (297)
T 3g4e_A 73 -----TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH-----V 141 (297)
T ss_dssp -----TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC-----E
T ss_pred -----CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC-----E
Confidence 3699999988887655422 23478899999987 788753 2357888886542 1
Q ss_pred eeeecCCCCCCceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEEC---CCCCEE--EEeeCCCCC
Q 019290 240 QLFAEMPRFPDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFD---VNGNVV--DVLDGNEGN 313 (343)
Q Consensus 240 ~~~~~~~~~p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d---~~g~~~--~~~~~~~~~ 313 (343)
..+......|++++++++|+ +|+++.. .+.|++++ .+|... ..+.....
T Consensus 142 ~~~~~~~~~pngi~~spdg~~lyv~~~~------------------------~~~i~~~~~d~~~G~~~~~~~~~~~~~- 196 (297)
T 3g4e_A 142 KKYFDQVDISNGLDWSLDHKIFYYIDSL------------------------SYSVDAFDYDLQTGQISNRRSVYKLEK- 196 (297)
T ss_dssp EEEEEEESBEEEEEECTTSCEEEEEEGG------------------------GTEEEEEEECTTTCCEEEEEEEEECCG-
T ss_pred EEEeeccccccceEEcCCCCEEEEecCC------------------------CCcEEEEeccCCCCcccCcEEEEECCC-
Confidence 12222223488999999995 7888765 23666765 345542 22221111
Q ss_pred ccCCceeEEEe-CCEEEEecCCCCeEEEEcC
Q 019290 314 TLNSVSEVQEY-GEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 314 ~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 343 (343)
....+..+..+ +|+||+++...+.|.+|++
T Consensus 197 ~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 197 EEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp GGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred CCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 11234555555 8999999999999999975
No 73
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=1.8e-11 Score=110.70 Aligned_cols=247 Identities=14% Similarity=0.148 Sum_probs=144.4
Q ss_pred CCCCCceEEEcCCCCeeEEEecC----CEEE--EEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 33 GVVGPESLAFDCNGEGPYVGVSD----GRIL--KWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~~----g~i~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
....|..++++++|+.+|+...+ +.+. .++..+++...+.... .....|.++++ .
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~-----------------~~~~~p~~~~~-d- 108 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQK-----------------TMGADPCYLTT-N- 108 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEE-----------------CSSSCEEEEEE-C-
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEec-----------------cCCCCcEEEEE-C-
Confidence 34579999999999988876653 6665 4555556555543211 12235778888 3
Q ss_pred CCeEEEEeCCCe-EEEEeCCC-CeEEEccc----cc-----CCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeee
Q 019290 107 TCDLYIADAYFG-LMVVGPNG-GQAQQLAS----SA-----GGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSI 174 (343)
Q Consensus 107 ~~~l~v~~~~~g-i~~~d~~~-~~~~~~~~----~~-----~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~ 174 (343)
++.||+++...+ +..++.++ +.+..+.. .. ..+....++.+++++ ||+ +|+++..
T Consensus 109 g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~------------ 175 (361)
T 3scy_A 109 GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLG------------ 175 (361)
T ss_dssp SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETT------------
T ss_pred CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCC------------
Confidence 778999975544 77888753 32222211 00 011123467899999 576 8887754
Q ss_pred eecCCCceEEEE--eCCCC----c-e-------EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccce
Q 019290 175 ATGDRSGRLLKY--DPLKK----N-V-------TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQ 240 (343)
Q Consensus 175 ~~~~~~~~v~~~--d~~~~----~-~-------~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~ 240 (343)
.+.|..| +..++ + + .........+..+++++|++.+|++....+.|.+|++++... ....
T Consensus 176 -----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~-~~~~ 249 (361)
T 3scy_A 176 -----TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML-DEIQ 249 (361)
T ss_dssp -----TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE-EEEE
T ss_pred -----CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce-EEeE
Confidence 3345444 54443 2 2 112234456889999999999999987789999999874211 1112
Q ss_pred eeecCC---CCCCceeeCCCCCE-EEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCcc
Q 019290 241 LFAEMP---RFPDNIKSDSKGEF-WIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTL 315 (343)
Q Consensus 241 ~~~~~~---~~p~~i~~d~~G~l-wi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~ 315 (343)
.+...+ ..|.+++++++|+. |++.......+ .++.+++ +|+.......+.+
T Consensus 250 ~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i---------------------~v~~~~~~~g~~~~~~~~~~g--- 305 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV---------------------AIFKVDETNGTLTKVGYQLTG--- 305 (361)
T ss_dssp EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE---------------------EEEEECTTTCCEEEEEEEECS---
T ss_pred EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE---------------------EEEEEcCCCCcEEEeeEecCC---
Confidence 121111 12457899999974 55543202222 5666664 4554322221112
Q ss_pred CCceeEEE--eCCEEEEecCCCCeEEEE
Q 019290 316 NSVSEVQE--YGEYLYTGSSVQPYVVVI 341 (343)
Q Consensus 316 ~~~~~~~~--~~g~l~i~~~~~~~i~~~ 341 (343)
..+..+.. ++..||+++...+.|.+|
T Consensus 306 ~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 306 IHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp SCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred CCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 12333333 355699999888888774
No 74
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=1.7e-12 Score=117.28 Aligned_cols=195 Identities=14% Similarity=0.193 Sum_probs=131.7
Q ss_pred CCCCCceEEEcCCCCeeEEEec-----CCEEEEEEcCCCCe-EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 33 GVVGPESLAFDCNGEGPYVGVS-----DGRILKWKAANSGW-TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~-----~g~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
.+..|.++++|++|++|+++.. .++|++||+.+++. ..+..... .......+++++++++
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~--------------~~~~~~~~~~v~vd~~ 130 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP--------------ITLSNSFVNDLAVDLI 130 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT--------------TSCTTCCCCEEEEETT
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh--------------hcccccccceEEEecC
Confidence 4568999999999995556554 57999999987763 33321100 0012235789999975
Q ss_pred CCeEEEEeC---C-CeEEEEeCCCCeEEEccccc------------CCCC-------------ccCcceeEEeCCCC-eE
Q 019290 107 TCDLYIADA---Y-FGLMVVGPNGGQAQQLASSA------------GGIP-------------FRFTNDLDIDPNTG-IV 156 (343)
Q Consensus 107 ~~~l~v~~~---~-~gi~~~d~~~~~~~~~~~~~------------~~~~-------------~~~~~~i~~d~~dg-~l 156 (343)
++.+|+++. . .+|+++|+++++...+.... .+.. ...+++|++++ || .|
T Consensus 131 ~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~l 209 (343)
T 2qe8_A 131 HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWL 209 (343)
T ss_dssp TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEE
T ss_pred CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEE
Confidence 689999986 3 46999999888765543210 0000 12468999999 46 69
Q ss_pred EEEeCCcccccccceeeeeecCCCceEEEEeCC---CCc---------eEEeecCCCCcceeEEecCCCEEEEEEcCCCe
Q 019290 157 YFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL---KKN---------VTVMYNGLSFPNGVALSNNNSFLLLAESATLK 224 (343)
Q Consensus 157 ~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~---~~~---------~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~ 224 (343)
|+++.. ...|++++.. .+. +.. ......|.+++++++| .+|+++...++
T Consensus 210 y~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~g~pdgia~d~~G-~l~va~~~~~~ 270 (343)
T 2qe8_A 210 YLSPMH-----------------STSMYRIKSADLSNLQLTDAELGSKIER-YSEKPICDGISIDKDH-NIYVGDLAHSA 270 (343)
T ss_dssp EEEESS-----------------CSEEEEEEHHHHTCTTCCHHHHHTTCEE-EEECCSCSCEEECTTC-CEEEEEGGGTE
T ss_pred EEEeCC-----------------CCeEEEEEHHHhcCCCCChhhhhcceEe-cccCCCCceEEECCCC-CEEEEccCCCe
Confidence 998765 4578888742 111 111 1123468999999987 59999999999
Q ss_pred EEEEEc-cCccccccceeeecC--CCCCCceeeCCCCCEEEEecc
Q 019290 225 ILRFWL-QGERTTYTPQLFAEM--PRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 225 i~~~~~-~~~~~~~~~~~~~~~--~~~p~~i~~d~~G~lwi~~~~ 266 (343)
|.+|+. ++ +...+... ...|.+++++++|++|++++.
T Consensus 271 V~~~d~~~G-----~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 271 IGVITSADR-----AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp EEEEETTTT-----EEEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred EEEEECCCC-----CEEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 999997 44 22333322 235899999999999999875
No 75
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.50 E-value=1.4e-12 Score=115.67 Aligned_cols=186 Identities=13% Similarity=0.141 Sum_probs=124.5
Q ss_pred CCceEEEcCCCCeeEEEe-cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVGV-SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~-~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
.|.+++++++|+ +|++. .+++|++++++ +++..+..... ......|+++++++ +|++|+++
T Consensus 87 ~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~~~~~~~~~~---------------~~~~~~~~~i~~d~-dG~l~~td 148 (305)
T 3dr2_A 87 FTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQAHLLVGRYA---------------GKRLNSPNDLIVAR-DGAIWFTD 148 (305)
T ss_dssp CEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEECEET---------------TEECSCCCCEEECT-TSCEEEEC
T ss_pred ccceeeECCCCC-EEEEECCCCEEEEECCC-CCEEEEEeccC---------------CCccCCCCCEEECC-CCCEEEeC
Confidence 689999999999 66554 45799999987 55655532110 01224578899998 89999964
Q ss_pred C------------------CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeee
Q 019290 115 A------------------YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIA 175 (343)
Q Consensus 115 ~------------------~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~ 175 (343)
. ..+|+++|+++++++.+. . ...++++++++ |++ ||+++....
T Consensus 149 ~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-----~~~p~gl~~sp-dg~~lyv~~~~~~----------- 210 (305)
T 3dr2_A 149 PPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-----LDHPNGLAFSP-DEQTLYVSQTPEQ----------- 210 (305)
T ss_dssp CSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-----ESSEEEEEECT-TSSEEEEEECCC------------
T ss_pred cCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-----CCCCcceEEcC-CCCEEEEEecCCc-----------
Confidence 2 246999999888777653 1 24688999999 565 999876410
Q ss_pred ecCCCceEEEEeCCCCce---EEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCc
Q 019290 176 TGDRSGRLLKYDPLKKNV---TVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDN 251 (343)
Q Consensus 176 ~~~~~~~v~~~d~~~~~~---~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~ 251 (343)
......|++++.+++.+ +.+. .....|.+++++++|+ ||++. .++|++|+.++. ....+. .+..+.+
T Consensus 211 -~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~----~~~~~~-~~~~~~~ 281 (305)
T 3dr2_A 211 -GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQ----LLGHIP-TPGTASN 281 (305)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSC----EEEEEE-CSSCCCE
T ss_pred -CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCC----EEEEEE-CCCceeE
Confidence 00125688887654332 1221 1234588999999987 78775 467999998652 222332 2224788
Q ss_pred eeeCCCC-CEEEEecc
Q 019290 252 IKSDSKG-EFWIAMNS 266 (343)
Q Consensus 252 i~~d~~G-~lwi~~~~ 266 (343)
+++++++ .||+++..
T Consensus 282 ~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 282 CTFDQAQQRLFITGGP 297 (305)
T ss_dssp EEECTTSCEEEEEETT
T ss_pred EEEeCCCCEEEEEcCC
Confidence 8888776 69999876
No 76
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.50 E-value=2.4e-11 Score=108.99 Aligned_cols=261 Identities=15% Similarity=0.130 Sum_probs=154.8
Q ss_pred CCCCCceEEEcCCCCeeEEEec-CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC---CC
Q 019290 33 GVVGPESLAFDCNGEGPYVGVS-DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV---TC 108 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~-~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~~ 108 (343)
++..|.+|++.++|+ +|+... .|+|+++++.++....+...+. ........+.||+++++ ++
T Consensus 30 gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~-------------v~~~g~~GllGia~~Pdf~~~g 95 (347)
T 3das_A 30 GLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPG-------------VSPSGEGGLLGIALSPDYASDH 95 (347)
T ss_dssp CCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTT-------------CCCBTTBSEEEEEECTTHHHHC
T ss_pred CCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCc-------------eeecCCCCceeeEeccccccCC
Confidence 677899999999999 666655 8999999887666555432110 11123446899999973 58
Q ss_pred eEEEEeC---CCeEEEEeCCCC--------eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeec
Q 019290 109 DLYIADA---YFGLMVVGPNGG--------QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATG 177 (343)
Q Consensus 109 ~l~v~~~---~~gi~~~d~~~~--------~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~ 177 (343)
.||+..+ .+.|.++....+ ..+.+.........+....|++++ ||.|||+..........+. ..
T Consensus 96 ~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd----~~ 170 (347)
T 3das_A 96 MVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQD----RK 170 (347)
T ss_dssp EEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTC----TT
T ss_pred EEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccC----CC
Confidence 8999632 356998876542 123332222222335678899999 6999998643110000000 01
Q ss_pred CCCceEEEEeCCCC--------ceEEeecCCCCcceeEEecCCCEEEEEEcCC---CeEEEEEccCcc----ccc-----
Q 019290 178 DRSGRLLKYDPLKK--------NVTVMYNGLSFPNGVALSNNNSFLLLAESAT---LKILRFWLQGER----TTY----- 237 (343)
Q Consensus 178 ~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~---~~i~~~~~~~~~----~~~----- 237 (343)
...++|+|+++++. ..+.+..++..+.++++++++ .||+++... ..|.++...++. ..+
T Consensus 171 ~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G-~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~ 249 (347)
T 3das_A 171 SLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQ-RLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGS 249 (347)
T ss_dssp CSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTC-CEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCT
T ss_pred CCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCC-CEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCc
Confidence 12578999998754 234566788889999999975 589998654 345555432210 000
Q ss_pred cc-eeeec-CC--CCCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCE-----EEEee
Q 019290 238 TP-QLFAE-MP--RFPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNV-----VDVLD 308 (343)
Q Consensus 238 ~~-~~~~~-~~--~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~-----~~~~~ 308 (343)
.+ ..+.. .. ..|.|+++. +|.+|++... + ..|.++..++.. ...+.
T Consensus 250 ~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~-~-----------------------~~l~~v~~~~~~~~~~~e~~l~ 304 (347)
T 3das_A 250 GFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLR-G-----------------------ERLWRIPLKGTAAAADPQAFLE 304 (347)
T ss_dssp TCCCCSEEECTTTCCEEEEEEE-TTEEEEEEST-T-----------------------CSEEEEEEETTEESSCCEEEST
T ss_pred cccCCcEecCCCCCCCcceEEE-cCceeecccc-C-----------------------CEEEEEEecCCceecceEEeec
Confidence 00 00111 11 136678776 5889999876 2 355566433221 12222
Q ss_pred CCCCCccCCceeEEEe-CCEEEEecCCCC----------eEEEEc
Q 019290 309 GNEGNTLNSVSEVQEY-GEYLYTGSSVQP----------YVVVIK 342 (343)
Q Consensus 309 ~~~~~~~~~~~~~~~~-~g~l~i~~~~~~----------~i~~~~ 342 (343)
. ....+..+... +|.|||++.+.+ +|+|+.
T Consensus 305 ~----~~gR~~dv~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~ 345 (347)
T 3das_A 305 G----EYGRLRTVAPAGGDKLWLVTSNTDGRGDAKGGDDRILELE 345 (347)
T ss_dssp T----TSSCEEEEEEEETTEEEEEECTTSSSSCCCTTCSCEEEEE
T ss_pred C----CCCCccEEEECCCCcEEEEEcCCCCCCCCCCCCCEEEEEe
Confidence 1 12345555444 999999987655 677764
No 77
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.47 E-value=7e-12 Score=111.72 Aligned_cols=173 Identities=10% Similarity=0.063 Sum_probs=113.0
Q ss_pred CCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEE
Q 019290 107 TCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKY 186 (343)
Q Consensus 107 ~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (343)
++.||+++...+++.+|++ ++........ ......+++++ +|.+|+++. .++|+++
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~----~~~~~~~~~~~-~g~l~vgt~------------------~~~l~~~ 162 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTK----KAIYATPIVSE-DGTIYVGSN------------------DNYLYAI 162 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECS----SCCCSCCEECT-TSCEEEECT------------------TSEEEEE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCC----CceeeeeEEcC-CCEEEEEcC------------------CCEEEEE
Confidence 6899999656779999998 6554322211 12356778888 599999664 3579999
Q ss_pred eCCCCceE-EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEec
Q 019290 187 DPLKKNVT-VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMN 265 (343)
Q Consensus 187 d~~~~~~~-~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~ 265 (343)
|++ ++.. .+.........++++.++. +|++. +.|++++..+. ....+.........+++|++|+||+++.
T Consensus 163 d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t---~~l~~~d~~g~----~~~~~~~~~~~~~~~~~~~~g~l~v~t~ 233 (330)
T 3hxj_A 163 NPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS---DKVYAINPDGT----EKWNFYAGYWTVTRPAISEDGTIYVTSL 233 (330)
T ss_dssp CTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES---SSEEEECTTSC----EEEEECCSSCCCSCCEECTTSCEEEEET
T ss_pred CCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe---CEEEEECCCCc----EEEEEccCCcceeceEECCCCeEEEEcC
Confidence 988 5543 3322233455677766664 77764 78999984331 1111111223356788999999999986
Q ss_pred cCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 266 SARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
. ++++++|++|+.+..+..+.. ....+..+ +|+||+++.. ..+.+++
T Consensus 234 ~-------------------------~gl~~~~~~g~~~~~~~~~~~----~~~~~~~~~~g~l~v~t~~-ggl~~~d 281 (330)
T 3hxj_A 234 D-------------------------GHLYAINPDGTEKWRFKTGKR----IESSPVIGNTDTIYFGSYD-GHLYAIN 281 (330)
T ss_dssp T-------------------------TEEEEECTTSCEEEEEECSSC----CCSCCEECTTSCEEEECTT-CEEEEEC
T ss_pred C-------------------------CeEEEECCCCCEeEEeeCCCC----ccccceEcCCCeEEEecCC-CCEEEEC
Confidence 4 488999999988776664332 12233345 8999999874 3566665
No 78
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.47 E-value=3.9e-11 Score=102.96 Aligned_cols=201 Identities=11% Similarity=0.106 Sum_probs=130.3
Q ss_pred ccCCCC-CCCceEEEcCCCCeeEE-EecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 29 LQLPGV-VGPESLAFDCNGEGPYV-GVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 29 ~~~~~~-~~p~~l~~d~~g~~l~~-~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
.++|++ ..+.+|+++++++.||+ ...+++|+.+|+.+.....+.. .....+.||++..
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l-------------------~g~~D~EGIa~~~- 79 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPL-------------------DFVKDLETIEYIG- 79 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEEC-------------------SSCSSEEEEEECS-
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEec-------------------CCCCChHHeEEeC-
Confidence 467755 36999999998777885 6678899999998443333321 2234578999997
Q ss_pred CCeEEEEeCCC-eEEEEeCCCC-eEEEc--ccc--cCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCC
Q 019290 107 TCDLYIADAYF-GLMVVGPNGG-QAQQL--ASS--AGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRS 180 (343)
Q Consensus 107 ~~~l~v~~~~~-gi~~~d~~~~-~~~~~--~~~--~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
++.+|+++... +++.++.... .+... ... ..........++++|+.+++||++.... .
T Consensus 80 ~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~----------------p 143 (255)
T 3qqz_A 80 DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN----------------P 143 (255)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS----------------S
T ss_pred CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC----------------C
Confidence 88898986544 5777765332 21111 111 1112234568999999656899976431 3
Q ss_pred ceEEEEeC--CCCceEEee-------cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC------
Q 019290 181 GRLLKYDP--LKKNVTVMY-------NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM------ 245 (343)
Q Consensus 181 ~~v~~~d~--~~~~~~~~~-------~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~------ 245 (343)
..||.++. .+..+..+. .....+.+++++|..+.+|+.+.....|..+|.++.-. .........
T Consensus 144 ~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~-~~~~L~~g~~~l~~~ 222 (255)
T 3qqz_A 144 IEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVI-GEMSLTKGSRGLSHN 222 (255)
T ss_dssp EEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE-EEEECSTTGGGCSSC
T ss_pred ceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEE-EEEEcCCccCCcccc
Confidence 36888872 222233221 12346789999999999999999999999999877422 211111111
Q ss_pred CCCCCceeeCCCCCEEEEecc
Q 019290 246 PRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 246 ~~~p~~i~~d~~G~lwi~~~~ 266 (343)
-..|.|+++|++|++||++-.
T Consensus 223 ~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 223 IKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp CCSEEEEEECTTCCEEEEETT
T ss_pred cCCCCeeEECCCCCEEEEcCC
Confidence 124899999999999999643
No 79
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.47 E-value=8e-11 Score=104.91 Aligned_cols=241 Identities=15% Similarity=0.180 Sum_probs=143.1
Q ss_pred CCceEEEcCCCCeeEEEecC-CEEEEEEcC--CCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 36 GPESLAFDCNGEGPYVGVSD-GRILKWKAA--NSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~-g~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
.|.+++++++|+.+|++..+ +.|..|+.+ ++....+... .....|.+++++++++.||+
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~s~dg~~l~~ 100 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES------------------ALPGSLTHISTDHQGQFVFV 100 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE------------------ECSSCCSEEEECTTSSEEEE
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc------------------ccCCCCcEEEEcCCCCEEEE
Confidence 79999999999977776655 888888775 5555443211 11125788999995556888
Q ss_pred EeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCC-eEEEEeCCcccccccceeeeeecCCCceEEEEeCCC
Q 019290 113 ADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTG-IVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK 190 (343)
Q Consensus 113 ~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 190 (343)
+....+ |..++.+++........... ...+..+++++ +| .+|+++.. .+.|..||..+
T Consensus 101 ~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~-dg~~l~~~~~~-----------------~~~v~~~d~~~ 160 (343)
T 1ri6_A 101 GSYNAGNVSVTRLEDGLPVGVVDVVEG--LDGCHSANISP-DNRTLWVPALK-----------------QDRICLFTVSD 160 (343)
T ss_dssp EETTTTEEEEEEEETTEEEEEEEEECC--CTTBCCCEECT-TSSEEEEEEGG-----------------GTEEEEEEECT
T ss_pred EecCCCeEEEEECCCCccccccccccC--CCCceEEEECC-CCCEEEEecCC-----------------CCEEEEEEecC
Confidence 876444 88888743332222111111 13478899999 46 47776533 45688887765
Q ss_pred -CceEE-----ee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCcc-ccccceeeecCC------CCCCceeeCC
Q 019290 191 -KNVTV-----MY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGER-TTYTPQLFAEMP------RFPDNIKSDS 256 (343)
Q Consensus 191 -~~~~~-----~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~------~~p~~i~~d~ 256 (343)
++... .. .....+.+++++++++.+|++....+.|..|+++... .+.....+...+ ..+..+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 55432 11 2334678899999999999998788999999986321 101111121111 1233588999
Q ss_pred CCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC--C-CEEEEeeCCCCCccCCceeEEE--eCCEEEE
Q 019290 257 KGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN--G-NVVDVLDGNEGNTLNSVSEVQE--YGEYLYT 330 (343)
Q Consensus 257 ~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~--g-~~~~~~~~~~~~~~~~~~~~~~--~~g~l~i 330 (343)
+|+ +|++... .+.+..++.+ + +.......+.+. . +..+.. ++..||+
T Consensus 241 dg~~l~v~~~~------------------------~~~i~v~d~~~~~~~~~~~~~~~~~~--~-~~~~~~s~dg~~l~~ 293 (343)
T 1ri6_A 241 DGRHLYACDRT------------------------ASLITVFSVSEDGSVLSKEGFQPTET--Q-PRGFNVDHSGKYLIA 293 (343)
T ss_dssp TSSEEEEEETT------------------------TTEEEEEEECTTSCCEEEEEEEECSS--S-CCCEEECTTSSEEEE
T ss_pred CCCEEEEEecC------------------------CCEEEEEEEcCCCCceEEeeeecCCC--c-cceEEECCCCCEEEE
Confidence 995 5656544 2345555543 3 222221111111 1 333333 3556888
Q ss_pred ecCCCCeEEEE
Q 019290 331 GSSVQPYVVVI 341 (343)
Q Consensus 331 ~~~~~~~i~~~ 341 (343)
++...+.|.++
T Consensus 294 ~~~~~~~v~v~ 304 (343)
T 1ri6_A 294 AGQKSHHISVY 304 (343)
T ss_dssp ECTTTCEEEEE
T ss_pred ecCCCCeEEEE
Confidence 88777777776
No 80
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.47 E-value=1.2e-11 Score=106.84 Aligned_cols=196 Identities=11% Similarity=0.123 Sum_probs=134.3
Q ss_pred CeeeEEEeCCCCeEEEEeC---CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceee
Q 019290 97 RPLGIKFNPVTCDLYIADA---YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMS 173 (343)
Q Consensus 97 ~p~gi~~~~~~~~l~v~~~---~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~ 173 (343)
.+.|+.+++ ++.||+++. .+.|.++|++++++..-..... ..+..+++++. +++|+++..
T Consensus 22 f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~---~~fgeGi~~~g--~~lyv~t~~----------- 84 (266)
T 2iwa_A 22 FTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD---SYFGEGLTLLN--EKLYQVVWL----------- 84 (266)
T ss_dssp CEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT---TCCEEEEEEET--TEEEEEETT-----------
T ss_pred CcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC---CcceEEEEEeC--CEEEEEEec-----------
Confidence 478999998 689999964 2469999999998765433221 13455788885 699998865
Q ss_pred eeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CC-CCCCc
Q 019290 174 IATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MP-RFPDN 251 (343)
Q Consensus 174 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~-~~p~~ 251 (343)
.+.++.+|+++.+...-.... .+.+..+++|++.+|+++ .++.|+.+|..+......+.+-.. .+ ..|++
T Consensus 85 ------~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 85 ------KNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp ------CSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred ------CCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 678999999877654323222 466777888999999997 688999999866332122111110 01 13556
Q ss_pred eeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCC--------C-CccCCceeE
Q 019290 252 IKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNE--------G-NTLNSVSEV 321 (343)
Q Consensus 252 i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~--------~-~~~~~~~~~ 321 (343)
+... +|++|++.+. .+.|.++|+ .++++..+..+. . .......++
T Consensus 157 le~~-dg~lyvn~~~------------------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGI 211 (266)
T 2iwa_A 157 LEYI-NGEVWANIWQ------------------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGI 211 (266)
T ss_dssp EEEE-TTEEEEEETT------------------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEE
T ss_pred EEEE-CCEEEEecCC------------------------CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEE
Confidence 7666 7899999876 458899998 688877776421 0 011233444
Q ss_pred EEe--CCEEEEecCCCCeEEEEc
Q 019290 322 QEY--GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 322 ~~~--~g~l~i~~~~~~~i~~~~ 342 (343)
..+ ++++|+++...+.+.+++
T Consensus 212 a~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 212 AWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp EEETTTTEEEEEETTCSEEEEEE
T ss_pred EEcCCCCEEEEECCCCCeEEEEE
Confidence 443 679999999999999886
No 81
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.47 E-value=5.1e-11 Score=107.11 Aligned_cols=204 Identities=17% Similarity=0.134 Sum_probs=126.0
Q ss_pred CCCceEEEcCCCCeeEEEe-cCCEEEEEEcC-CCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 35 VGPESLAFDCNGEGPYVGV-SDGRILKWKAA-NSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 35 ~~p~~l~~d~~g~~l~~~~-~~g~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
..|.+++++++|+.+|++. .++.+..|+.. ++....+...... +.+ +........++++++++ ++++|+
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~-------~~~-p~~~~~~~~~~~~~~sp-dg~l~v 156 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHS-------GHG-PRPEQDGSHIHYTDLTP-DNRLAV 156 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECC-------CCC-SSTTCSSCCEEEEEECT-TSCEEE
T ss_pred CCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecC-------CCC-CCccccCCCceEEEECC-CCcEEE
Confidence 4799999999999788665 67888888874 3444433211100 000 00011233578899999 666999
Q ss_pred EeCCCe-EEEEeCC-CCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCce--EEEEe
Q 019290 113 ADAYFG-LMVVGPN-GGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGR--LLKYD 187 (343)
Q Consensus 113 ~~~~~g-i~~~d~~-~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~--v~~~d 187 (343)
++...+ +..++.+ +++........ ......+..+++++ ||+ +|+++.. .+. +|.++
T Consensus 157 ~~~~~~~v~~~~~~~~g~~~~~~~~~-~~~g~~p~~~~~sp-dg~~l~v~~~~-----------------~~~v~v~~~~ 217 (347)
T 3hfq_A 157 IDLGSDKVYVYNVSDAGQLSEQSVLT-MEAGFGPRHLVFSP-DGQYAFLAGEL-----------------SSQIASLKYD 217 (347)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEE-CCTTCCEEEEEECT-TSSEEEEEETT-----------------TTEEEEEEEE
T ss_pred EeCCCCEEEEEEECCCCcEEEeeeEE-cCCCCCCceEEECC-CCCEEEEEeCC-----------------CCEEEEEEec
Confidence 876544 8888877 56655432111 11123578899999 576 8886654 334 44555
Q ss_pred CCCCceEEee---cC------CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCC
Q 019290 188 PLKKNVTVMY---NG------LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKG 258 (343)
Q Consensus 188 ~~~~~~~~~~---~~------~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G 258 (343)
..+++..... .. ...+.++++++||+.||++....+.|.+|+++....+.....+......|.+++++++|
T Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg 297 (347)
T 3hfq_A 218 TQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTE 297 (347)
T ss_dssp TTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTS
T ss_pred CCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCC
Confidence 4456543221 11 13367899999999999998888999999986422211122221123358899999999
Q ss_pred C-EEEEecc
Q 019290 259 E-FWIAMNS 266 (343)
Q Consensus 259 ~-lwi~~~~ 266 (343)
+ ||++...
T Consensus 298 ~~l~v~~~~ 306 (347)
T 3hfq_A 298 AFVVVVNQN 306 (347)
T ss_dssp SEEEEEETT
T ss_pred CEEEEEEcC
Confidence 7 6666654
No 82
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.44 E-value=6.9e-11 Score=101.99 Aligned_cols=197 Identities=11% Similarity=-0.006 Sum_probs=131.0
Q ss_pred CccccccccCCCCCCCceEEEcCCCCeeEEEec---CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCe
Q 019290 22 SSKSYQQLQLPGVVGPESLAFDCNGEGPYVGVS---DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRP 98 (343)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~l~~d~~g~~l~~~~~---~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 98 (343)
+.+.+++++++....|++|+++++|. +|.++. .+.|..+|+.+++...-... .....+
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l------------------~~~~fg 68 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIHKM------------------DDSYFG 68 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEEEC------------------CTTCCE
T ss_pred CceEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEEec------------------CCCcce
Confidence 45677888888656789999999875 887653 57899999998775532110 111234
Q ss_pred eeEEEeCCCCeEEEEeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeec
Q 019290 99 LGIKFNPVTCDLYIADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATG 177 (343)
Q Consensus 99 ~gi~~~~~~~~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~ 177 (343)
.|++++ ++.||+++...+ ++++|+++.++..-.... . ....+++.|. +++|+++.
T Consensus 69 eGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g--~--~~g~glt~Dg--~~l~vs~g---------------- 124 (266)
T 2iwa_A 69 EGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ--M--KDGWGLATDG--KILYGSDG---------------- 124 (266)
T ss_dssp EEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECC--S--SSCCEEEECS--SSEEEECS----------------
T ss_pred EEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECC--C--CCeEEEEECC--CEEEEECC----------------
Confidence 577777 579999987655 999999987765432221 1 1123455554 68999873
Q ss_pred CCCceEEEEeCCCCceEE-eec-----CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC------
Q 019290 178 DRSGRLLKYDPLKKNVTV-MYN-----GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM------ 245 (343)
Q Consensus 178 ~~~~~v~~~d~~~~~~~~-~~~-----~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~------ 245 (343)
.+.|+.+|+++.+... +.- ....++.+.+. ++ .+|++....+.|.++|+.+......+.. ...
T Consensus 125 --s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~-~g~~~~~~~ 199 (266)
T 2iwa_A 125 --TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWILL-PNLRKKLID 199 (266)
T ss_dssp --SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEEC-HHHHHHHHH
T ss_pred --CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEEC-CCccccccc
Confidence 4689999998866543 221 12357888887 55 6999988889999999876322111111 000
Q ss_pred -----CCCCCceeeCCCC-CEEEEecc
Q 019290 246 -----PRFPDNIKSDSKG-EFWIAMNS 266 (343)
Q Consensus 246 -----~~~p~~i~~d~~G-~lwi~~~~ 266 (343)
...|.|+++|++| ++||+...
T Consensus 200 ~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 200 EGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp TTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred ccccccCceEEEEEcCCCCEEEEECCC
Confidence 0246799999987 68888755
No 83
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.44 E-value=6.3e-11 Score=107.66 Aligned_cols=250 Identities=14% Similarity=0.171 Sum_probs=144.4
Q ss_pred CCCCCCCceEEEcCCCCeeEEEecCCEEEEEEcC-CCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCe
Q 019290 31 LPGVVGPESLAFDCNGEGPYVGVSDGRILKWKAA-NSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCD 109 (343)
Q Consensus 31 ~~~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~ 109 (343)
.++...|..++++++|+.+|+...+ .+..|+.+ +++....... ...+.|.++++++ +++
T Consensus 36 ~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~------------------~~~g~~~~~~~sp-dg~ 95 (365)
T 1jof_A 36 IPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH------------------PIGGHPRANDADT-NTR 95 (365)
T ss_dssp CCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE------------------ECCSSGGGGCTTS-CCE
T ss_pred cCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe------------------ecCCCCccEEECC-CCC
Confidence 3444579999999999988877666 78888875 5544332110 0011356677888 555
Q ss_pred -EE--EEe-------------CCCeEEEEeCC-CCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccce
Q 019290 110 -LY--IAD-------------AYFGLMVVGPN-GGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYF 171 (343)
Q Consensus 110 -l~--v~~-------------~~~gi~~~d~~-~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~ 171 (343)
+| +++ ....+..++.+ +++...............++++++++ ||+ +|+++..
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~--------- 165 (365)
T 1jof_A 96 AIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLT--------- 165 (365)
T ss_dssp EEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETT---------
T ss_pred EEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCC---------
Confidence 33 332 12235566654 34443221111001124688999999 575 7776654
Q ss_pred eeeeecCCCceEEEEeCC-CCceEEee--c---CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCc-ccccc-ceeee
Q 019290 172 MSIATGDRSGRLLKYDPL-KKNVTVMY--N---GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGE-RTTYT-PQLFA 243 (343)
Q Consensus 172 ~~~~~~~~~~~v~~~d~~-~~~~~~~~--~---~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~-~~~~~-~~~~~ 243 (343)
.+.|+.|+.+ +++...+. . ....|..++++|||+.+|++...++.|.+|+++.. ..+.. ...+.
T Consensus 166 --------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 237 (365)
T 1jof_A 166 --------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP 237 (365)
T ss_dssp --------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred --------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence 3567777776 66654321 1 24568999999999999999877788988876531 11010 11121
Q ss_pred cCC----C---------CCCcee-eCCCCC-EEEEeccCCC-----ccccccccccccccCCCcccCCCeEEEECCCCCE
Q 019290 244 EMP----R---------FPDNIK-SDSKGE-FWIAMNSARG-----KIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNV 303 (343)
Q Consensus 244 ~~~----~---------~p~~i~-~d~~G~-lwi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~ 303 (343)
..+ + .+.+++ +++||+ ||++... .+ .+ .++.++.+|+.
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~-~~~~~~~~i---------------------~v~~~~~~g~~ 295 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA-NKFELQGYI---------------------AGFKLRDCGSI 295 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE-SSTTSCCEE---------------------EEEEECTTSCE
T ss_pred cCCCCcCCcccccccccccccEEEECCCCCEEEEECCC-CCCCCCCeE---------------------EEEEECCCCCE
Confidence 111 1 256788 999996 5666544 21 11 45555556765
Q ss_pred EEE---eeCCCCCccCCceeEEE---eCCEEEEecCCCCeEEEEc
Q 019290 304 VDV---LDGNEGNTLNSVSEVQE---YGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 304 ~~~---~~~~~~~~~~~~~~~~~---~~g~l~i~~~~~~~i~~~~ 342 (343)
... ...... .... ..+.+ +++.||+++..++.|.+++
T Consensus 296 ~~~~~~~~~~~~-~~~~-~a~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 296 EKQLFLSPTPTS-GGHS-NAVSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp EEEEEEEECSSC-CTTC-CCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred EEeeeeeecCCC-Cccc-ceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 432 222111 0111 12334 5788999998888887764
No 84
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.43 E-value=2.2e-10 Score=105.87 Aligned_cols=249 Identities=11% Similarity=0.130 Sum_probs=158.7
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
+.++++.++|++++++..++.|..||.++++...... .....+.+++++++++.+|++...
T Consensus 172 v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~~~~~~ 232 (433)
T 3bws_A 172 VETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD-------------------LTGKWSKILLYDPIRDLVYCSNWI 232 (433)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE-------------------CSSSSEEEEEEETTTTEEEEEETT
T ss_pred eeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc-------------------CCCCCeeEEEEcCCCCEEEEEecC
Confidence 5578898899966777788999999988765432211 122357889999955678787644
Q ss_pred -CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCC-eEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 117 -FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTG-IVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 117 -~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
..|..+|+++++....... ...+..+++++. | .+|++...... .....+.|+.+|..+++..
T Consensus 233 ~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~-g~~l~~~~~~~~~----------~~~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 233 SEDISVIDRKTKLEIRKTDK-----IGLPRGLLLSKD-GKELYIAQFSASN----------QESGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp TTEEEEEETTTTEEEEECCC-----CSEEEEEEECTT-SSEEEEEEEESCT----------TCSCCEEEEEEETTTTEEE
T ss_pred CCcEEEEECCCCcEEEEecC-----CCCceEEEEcCC-CCEEEEEECCCCc----------cccCCCeEEEEECCCCcEE
Confidence 4599999988876543222 134788999994 6 56665432000 0002457999998877665
Q ss_pred EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEeccCCCcccc
Q 019290 195 VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMNSARGKIES 273 (343)
Q Consensus 195 ~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~~~~~~~~~ 273 (343)
........+..++++++++.+|++...++.|.+|++.+... ...+ .....+..++++++|+ +|++.......
T Consensus 297 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~---~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~--- 369 (433)
T 3bws_A 297 DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV---QKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHP--- 369 (433)
T ss_dssp EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE---EEEE-ECSSSEEEEEECTTSSEEEEEECCCCCT---
T ss_pred eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE---EEEe-cCCCCCCeEEEcCCCCEEEEEecCCCcc---
Confidence 44433346788999999999999988899999999875221 1122 2233467889999996 66666531100
Q ss_pred ccccccccccCCCcc---cCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe--CCEEEEecCCCCeEEEEc
Q 019290 274 NKKTAFCEETAKPWF---LRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY--GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 274 ~~~~~~~~~~~~~~~---~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~~ 342 (343)
....+ ...+.|+.+|. +++.+..+... ..+..+... +..|++++...+.|.+++
T Consensus 370 ----------~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 370 ----------TEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-----NQPTGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp ----------TTCTTSCCSSCCEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred ----------ccccccccccceEEEEEECCCCcEEEEecCC-----CCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 00000 11247888987 56666666532 234444433 556788877778888775
No 85
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.41 E-value=1.1e-10 Score=107.94 Aligned_cols=232 Identities=14% Similarity=0.115 Sum_probs=148.2
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
.|.++++++++.+++++..++.|..||..+++........ ........+.++++.+ ++.+|++..
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~--------------~~~~~~~~v~~~~~~~-~~~~~~s~~ 188 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPE--------------KYKKKLGFVETISIPE-HNELWVSQM 188 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCH--------------HHHTTCCEEEEEEEGG-GTEEEEEEG
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcc--------------cccccCCceeEEEEcC-CCEEEEEEC
Confidence 5779999996664445556778999999887655432100 0011223467788877 788888765
Q ss_pred CC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 116 YF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 116 ~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
.. .|..+|.++++....... ....+..+++++.+..+|++... .+.|..+|..+++..
T Consensus 189 ~d~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~-----------------~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 189 QANAVHVFDLKTLAYKATVDL----TGKWSKILLYDPIRDLVYCSNWI-----------------SEDISVIDRKTKLEI 247 (433)
T ss_dssp GGTEEEEEETTTCCEEEEEEC----SSSSEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCceEEEEEcC----CCCCeeEEEEcCCCCEEEEEecC-----------------CCcEEEEECCCCcEE
Confidence 54 499999988765433221 12457889999942346665543 467999998877765
Q ss_pred EeecCCCCcceeEEecCCCEEEEEEc-------CCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEecc
Q 019290 195 VMYNGLSFPNGVALSNNNSFLLLAES-------ATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMNS 266 (343)
Q Consensus 195 ~~~~~~~~~~~i~~~~d~~~lyv~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~~ 266 (343)
........+.+++++++++.++++.. .++.|++|++.+... .......+.+..++++++|+ +|++...
T Consensus 248 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 248 RKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL----IDTIGPPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp EECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE----EEEEEEEECEEEEEECSSTTEEEEEETT
T ss_pred EEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE----EeeccCCCCcceEEECCCCCEEEEEecC
Confidence 54444456889999999998888764 356899999865221 11111223466788999985 7777655
Q ss_pred CCCccccccccccccccCCCcccCCCeEEEECCC-CCEEEEeeCCCCCccCCceeEEEe--CCEEEEecCCCC
Q 019290 267 ARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGNEGNTLNSVSEVQEY--GEYLYTGSSVQP 336 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~ 336 (343)
.+.+..+|.+ ++....+... ..+..+... +..||+++...+
T Consensus 324 ------------------------~~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~ 367 (433)
T 3bws_A 324 ------------------------CSKIEVYDLKEKKVQKSIPVF-----DKPNTIALSPDGKYLYVSCRGPN 367 (433)
T ss_dssp ------------------------TTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEECCCC
T ss_pred ------------------------CCEEEEEECCCCcEEEEecCC-----CCCCeEEEcCCCCEEEEEecCCC
Confidence 3477788875 5555555422 123333333 446888776654
No 86
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.40 E-value=3.1e-10 Score=103.41 Aligned_cols=218 Identities=17% Similarity=0.186 Sum_probs=143.6
Q ss_pred eEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC-CeEEEEeCCCC
Q 019290 49 PYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY-FGLMVVGPNGG 127 (343)
Q Consensus 49 l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~-~gi~~~d~~~~ 127 (343)
+.++..++.|..||..+++...... ....+.++++++++..||++... ..|..+|.+++
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~--------------------~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~ 64 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIP--------------------VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEE--------------------CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT
T ss_pred EEEcCCCCEEEEEECCCCeEEEEee--------------------cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCC
Confidence 4466778999999988765443221 11247889999944567777544 44999999888
Q ss_pred eEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCccee
Q 019290 128 QAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGV 206 (343)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i 206 (343)
+........ ..+..+++++. ++ +|++... .+.|+.+|..+++..........+.++
T Consensus 65 ~~~~~~~~~-----~~v~~~~~spd-g~~l~~~~~~-----------------~~~v~v~d~~~~~~~~~~~~~~~~~~~ 121 (391)
T 1l0q_A 65 NVIATVPAG-----SSPQGVAVSPD-GKQVYVTNMA-----------------SSTLSVIDTTSNTVAGTVKTGKSPLGL 121 (391)
T ss_dssp EEEEEEECS-----SSEEEEEECTT-SSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSEEEE
T ss_pred eEEEEEECC-----CCccceEECCC-CCEEEEEECC-----------------CCEEEEEECCCCeEEEEEeCCCCcceE
Confidence 765543221 25789999994 55 7776543 467999999888776555555668899
Q ss_pred EEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEeccCCCccccccccccccccCC
Q 019290 207 ALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAK 285 (343)
Q Consensus 207 ~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~ 285 (343)
+++++++.+|++....+.|++|++... +..........+..++++++|+ +|++...
T Consensus 122 ~~s~dg~~l~~~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~------------------- 178 (391)
T 1l0q_A 122 ALSPDGKKLYVTNNGDKTVSVINTVTK----AVINTVSVGRSPKGIAVTPDGTKVYVANFD------------------- 178 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTT----EEEEEEECCSSEEEEEECTTSSEEEEEETT-------------------
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCC----cEEEEEecCCCcceEEECCCCCEEEEEeCC-------------------
Confidence 999999999999888999999998652 2211122233467788999985 5666554
Q ss_pred CcccCCCeEEEECCC-CCEEEEeeCCCCCccCCceeEEE--eCCEEEEecC--CCCeEEEEc
Q 019290 286 PWFLRDPVGVKFDVN-GNVVDVLDGNEGNTLNSVSEVQE--YGEYLYTGSS--VQPYVVVIK 342 (343)
Q Consensus 286 ~~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~--~~g~l~i~~~--~~~~i~~~~ 342 (343)
.+.|..+|.+ ++....+.... .+..+.. ++..||+++. ....|.+++
T Consensus 179 -----~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 179 -----SMSISVIDTVTNSVIDTVKVEA-----APSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp -----TTEEEEEETTTTEEEEEEECSS-----EEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred -----CCEEEEEECCCCeEEEEEecCC-----CccceEECCCCCEEEEEecCcCCCcEEEEE
Confidence 3467788874 44444443211 2333333 2456777775 556676665
No 87
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.39 E-value=2.4e-10 Score=109.55 Aligned_cols=249 Identities=12% Similarity=0.084 Sum_probs=156.5
Q ss_pred cccccCCCCCCCceEEEcCCCCeeEEEecCCEEEEEEc--CCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE
Q 019290 26 YQQLQLPGVVGPESLAFDCNGEGPYVGVSDGRILKWKA--ANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF 103 (343)
Q Consensus 26 ~~~~~~~~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (343)
+..+..+. .|++++++++|+.+|++..++.|..||. .+.+...-. .....|.++++
T Consensus 172 ~~~i~~g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i--------------------~~g~~p~~va~ 229 (543)
T 1nir_A 172 VKVIDTGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI--------------------KIGIEARSVES 229 (543)
T ss_dssp EEEEECST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE--------------------ECCSEEEEEEE
T ss_pred EEEEecCc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE--------------------ecCCCcceEEe
Confidence 44554443 3899999999999998888899999999 554322110 12235889999
Q ss_pred eC----CCCeEEEEeCC-CeEEEEeCCCCeEEEcccccC----C---CCccCcceeEEeCCCCeEEEEeCCcccccccce
Q 019290 104 NP----VTCDLYIADAY-FGLMVVGPNGGQAQQLASSAG----G---IPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYF 171 (343)
Q Consensus 104 ~~----~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~----~---~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~ 171 (343)
++ +++.||+++.. ..|..+|.++++......... . .+...+..+++++.++.++++...
T Consensus 230 sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~--------- 300 (543)
T 1nir_A 230 SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE--------- 300 (543)
T ss_dssp CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT---------
T ss_pred CCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC---------
Confidence 98 78899999743 558899998876544322210 0 112356788888843456665543
Q ss_pred eeeeecCCCceEEEEeCCCCceEE--eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCC--
Q 019290 172 MSIATGDRSGRLLKYDPLKKNVTV--MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPR-- 247 (343)
Q Consensus 172 ~~~~~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-- 247 (343)
.+.|+.+|..+.+... .......+.+++++|+++++|++....+.|.++|..+... ...+ ....
T Consensus 301 --------~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l---~~~i-~~g~~p 368 (543)
T 1nir_A 301 --------TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL---SALV-DVGKTP 368 (543)
T ss_dssp --------TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE---EEEE-ECSSSB
T ss_pred --------CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE---EEee-ccCCCC
Confidence 5789999876543211 1233466889999999999999988889999999875221 1111 1111
Q ss_pred CC-Ccee-eCCC-CCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC--------CCEEEEeeCCCCCccC
Q 019290 248 FP-DNIK-SDSK-GEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN--------GNVVDVLDGNEGNTLN 316 (343)
Q Consensus 248 ~p-~~i~-~d~~-G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~--------g~~~~~~~~~~~~~~~ 316 (343)
+| .+.. .+++ |.+|++.... .+.|..+|.+ ++.+..+..+.+ ..
T Consensus 369 h~g~g~~~~~p~~g~~~~s~~~~-----------------------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~--~~ 423 (543)
T 1nir_A 369 HPGRGANFVHPKYGPVWSTSHLG-----------------------DGSISLIGTDPKNHPQYAWKKVAELQGQGG--GS 423 (543)
T ss_dssp CCTTCEEEEETTTEEEEEEEBSS-----------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCS--CC
T ss_pred CCCCCcccCCCCCccEEEeccCC-----------------------CceEEEEEeCCCCCchhcCeEEEEEEcCCC--Cc
Confidence 23 2333 4676 7899887531 1255555542 577777764332 11
Q ss_pred CceeEEEeCCEEEEecC-C-----CCeEEEEc
Q 019290 317 SVSEVQEYGEYLYTGSS-V-----QPYVVVIK 342 (343)
Q Consensus 317 ~~~~~~~~~g~l~i~~~-~-----~~~i~~~~ 342 (343)
.+....+++.+||+++. + +++|.+++
T Consensus 424 ~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 424 LFIKTHPKSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp CCEECCTTCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred eEEEcCCCCCcEEEecCCCCCcccCceEEEEE
Confidence 12222345788999873 2 44788876
No 88
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.38 E-value=6.4e-10 Score=106.59 Aligned_cols=234 Identities=9% Similarity=-0.032 Sum_probs=153.7
Q ss_pred EEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeEE
Q 019290 41 AFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLM 120 (343)
Q Consensus 41 ~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~ 120 (343)
++++++.++.+...++.|..+|..+++...... . ...+++++++++++.||+++..+.|.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~-------------------~-g~~~~~v~~spdg~~l~v~~~d~~V~ 203 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID-------------------T-GYAVHISRMSASGRYLLVIGRDARID 203 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEE-------------------C-STTEEEEEECTTSCEEEEEETTSEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEe-------------------c-CcccceEEECCCCCEEEEECCCCeEE
Confidence 478888755566778899999998876542211 1 11278999999667899998766699
Q ss_pred EEeC--CCCeEEEcccccCCCCccCcceeEEeC----CCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 121 VVGP--NGGQAQQLASSAGGIPFRFTNDLDIDP----NTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 121 ~~d~--~~~~~~~~~~~~~~~~~~~~~~i~~d~----~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
.+|. ++++...... .+ ..+.++++++ ++..+|+++.. .+.|..+|..+++..
T Consensus 204 v~D~~~~t~~~~~~i~--~g---~~p~~va~sp~~~~dg~~l~v~~~~-----------------~~~v~v~D~~t~~~~ 261 (543)
T 1nir_A 204 MIDLWAKEPTKVAEIK--IG---IEARSVESSKFKGYEDRYTIAGAYW-----------------PPQFAIMDGETLEPK 261 (543)
T ss_dssp EEETTSSSCEEEEEEE--CC---SEEEEEEECCSTTCTTTEEEEEEEE-----------------SSEEEEEETTTCCEE
T ss_pred EEECcCCCCcEEEEEe--cC---CCcceEEeCCCcCCCCCEEEEEEcc-----------------CCeEEEEeccccccc
Confidence 9999 6665433222 11 3578999998 64568886642 456888888777654
Q ss_pred EeecC------------CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EE
Q 019290 195 VMYNG------------LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FW 261 (343)
Q Consensus 195 ~~~~~------------~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lw 261 (343)
..... ...+.++++++++..+|++....+.|+.++...... .....+ .....|.++.++++|+ ++
T Consensus 262 ~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~-l~~~~i-~~~~~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 262 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN-LTVTSI-GAAPFLHDGGWDSSHRYFM 339 (543)
T ss_dssp EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS-CEEEEE-ECCSSCCCEEECTTSCEEE
T ss_pred eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc-ceeEEe-ccCcCccCceECCCCCEEE
Confidence 33221 124568899999999999998899999999875322 111122 2344688999999998 55
Q ss_pred EEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCcc-CCceeEEEeCCEEEEecC-CCCeE
Q 019290 262 IAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTL-NSVSEVQEYGEYLYTGSS-VQPYV 338 (343)
Q Consensus 262 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~i~~~-~~~~i 338 (343)
++... .+.|..+|. +++.+..+........ .......++.+.+|+++. ..+.|
T Consensus 340 va~~~------------------------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V 395 (543)
T 1nir_A 340 TAANN------------------------SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSI 395 (543)
T ss_dssp EEEGG------------------------GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEE
T ss_pred EEecC------------------------CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceE
Confidence 66554 346777987 5776666653222111 112222223588998875 56788
Q ss_pred EEEc
Q 019290 339 VVIK 342 (343)
Q Consensus 339 ~~~~ 342 (343)
.+++
T Consensus 396 ~v~d 399 (543)
T 1nir_A 396 SLIG 399 (543)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8775
No 89
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.37 E-value=8.6e-10 Score=96.36 Aligned_cols=217 Identities=12% Similarity=0.084 Sum_probs=142.8
Q ss_pred CCCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeEEEEe
Q 019290 45 NGEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVG 123 (343)
Q Consensus 45 ~g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~d 123 (343)
.|++++++..+++|+.+|+++++.. .+.. .....++++.+.+ +++++++ ...+|+.+|
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~-------------------~~~~~~~~~~~~p-dG~ilvs-~~~~V~~~d 62 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL-------------------EKGWECNSVAATK-AGEILFS-YSKGAKMIT 62 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC-------------------CTTCCCCEEEECT-TSCEEEE-CBSEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC-------------------CccCCCcCeEECC-CCCEEEe-CCCCEEEEC
Confidence 3566788888999999999676543 2210 1112467889998 8888885 567899999
Q ss_pred CCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee--cC--
Q 019290 124 PNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY--NG-- 199 (343)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~--~~-- 199 (343)
+ +|+...-...... ..++++.+.+ +|++++++... .++|+.+|++++.+..+. ..
T Consensus 63 ~-~G~~~W~~~~~~~---~~~~~~~~~~-dG~~lv~~~~~----------------~~~v~~vd~~Gk~l~~~~~~~~~~ 121 (276)
T 3no2_A 63 R-DGRELWNIAAPAG---CEMQTARILP-DGNALVAWCGH----------------PSTILEVNMKGEVLSKTEFETGIE 121 (276)
T ss_dssp T-TSCEEEEEECCTT---CEEEEEEECT-TSCEEEEEEST----------------TEEEEEECTTSCEEEEEEECCSCS
T ss_pred C-CCCEEEEEcCCCC---ccccccEECC-CCCEEEEecCC----------------CCEEEEEeCCCCEEEEEeccCCCC
Confidence 9 5765543332111 2356778888 59999876430 356888887644333322 11
Q ss_pred --CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcccccccc
Q 019290 200 --LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNKKT 277 (343)
Q Consensus 200 --~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~ 277 (343)
...+..+++.++|+. +++...+++|..++.++. ..-.+ ...+.|.+...+++|++++++..
T Consensus 122 ~~~~~~~~v~~~~~G~~-lv~~~~~~~v~~~d~~G~----~~w~~-~~~~~~~~~~~~~~g~~~v~~~~----------- 184 (276)
T 3no2_A 122 RPHAQFRQINKNKKGNY-LVPLFATSEVREIAPNGQ----LLNSV-KLSGTPFSSAFLDNGDCLVACGD----------- 184 (276)
T ss_dssp SGGGSCSCCEECTTSCE-EEEETTTTEEEEECTTSC----EEEEE-ECSSCCCEEEECTTSCEEEECBT-----------
T ss_pred cccccccCceECCCCCE-EEEecCCCEEEEECCCCC----EEEEE-ECCCCccceeEcCCCCEEEEeCC-----------
Confidence 123567788888874 566777899999998752 21222 23345778888999999999876
Q ss_pred ccccccCCCcccCCCeEEEECCC-CCEEEEeeCC--CCCccCCceeEEEe-CCEEEEecC
Q 019290 278 AFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGN--EGNTLNSVSEVQEY-GEYLYTGSS 333 (343)
Q Consensus 278 ~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~--~~~~~~~~~~~~~~-~g~l~i~~~ 333 (343)
.+.|+.+|++ |+.+-.+... ++.....++.+... +|++|+++.
T Consensus 185 -------------~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 185 -------------AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp -------------TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred -------------CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 3478999997 9988777532 22123345555444 899999985
No 90
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.36 E-value=1.2e-10 Score=103.20 Aligned_cols=187 Identities=13% Similarity=0.070 Sum_probs=123.5
Q ss_pred CCceEEEcCCCCeeEEEe-cC--CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 36 GPESLAFDCNGEGPYVGV-SD--GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~-~~--g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
.|.+|+++++|+ +|++. .. .+|++++..++++..+... .....+.+++..+ ++.+|+
T Consensus 73 ~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~------------------~~~~~~~g~~~~~-~~~~~v 132 (306)
T 2p4o_A 73 KVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTL------------------PDAIFLNGITPLS-DTQYLT 132 (306)
T ss_dssp EEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEEC------------------TTCSCEEEEEESS-SSEEEE
T ss_pred CceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeC------------------CCccccCcccccC-CCcEEE
Confidence 699999999999 56443 32 3699999888777665421 1123467887776 788999
Q ss_pred EeCC-CeEEEEeCCCCeEEEc--ccc----cCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 113 ADAY-FGLMVVGPNGGQAQQL--ASS----AGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 113 ~~~~-~gi~~~d~~~~~~~~~--~~~----~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
++.. ..|+++|+.+++.+.. ... .....+..++++..| ++.+|+++.. .++|++
T Consensus 133 ~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~d--g~~lyv~d~~-----------------~~~I~~ 193 (306)
T 2p4o_A 133 ADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF--GNFLYVSNTE-----------------KMLLLR 193 (306)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE--TTEEEEEETT-----------------TTEEEE
T ss_pred EECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcC--CCEEEEEeCC-----------------CCEEEE
Confidence 9864 4599999986543221 110 111223567888333 2589999876 568999
Q ss_pred EeCCC-Cce---EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCC-CCCCceeeC---CC
Q 019290 186 YDPLK-KNV---TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMP-RFPDNIKSD---SK 257 (343)
Q Consensus 186 ~d~~~-~~~---~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~p~~i~~d---~~ 257 (343)
++.+. ++. +.+ ..+..|.+++++++|. +|+++...++|.+++.++... ....+ ..+ ..|.+++++ ++
T Consensus 194 ~~~~~~g~~~~~~~~-~~~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G~~~--~~~~~-~~~~~~p~~~a~~g~~~d 268 (306)
T 2p4o_A 194 IPVDSTDKPGEPEIF-VEQTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDRSTT--IIAQA-EQGVIGSTAVAFGQTEGD 268 (306)
T ss_dssp EEBCTTSCBCCCEEE-EESCCCSSEEEBTTCC-EEEECBTTCCEEEECTTCCEE--EEECG-GGTCTTEEEEEECCSTTT
T ss_pred EEeCCCCCCCccEEE-eccCCCCCeEECCCCC-EEEEeCCCCeEEEECCCCCEE--EEeec-ccccCCceEEEEecccCC
Confidence 98763 332 222 2246799999999985 899998889999998764211 11111 122 348889997 67
Q ss_pred -CCEEEEecc
Q 019290 258 -GEFWIAMNS 266 (343)
Q Consensus 258 -G~lwi~~~~ 266 (343)
+.|||++..
T Consensus 269 ~~~LyVt~~~ 278 (306)
T 2p4o_A 269 CTAIYVVTNG 278 (306)
T ss_dssp TTEEEEEECT
T ss_pred CCEEEEECCC
Confidence 579999875
No 91
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.35 E-value=7.2e-10 Score=98.39 Aligned_cols=244 Identities=12% Similarity=0.018 Sum_probs=147.8
Q ss_pred cccccccCCCCC-CCceEEEcCCCCeeEE-EecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeE
Q 019290 24 KSYQQLQLPGVV-GPESLAFDCNGEGPYV-GVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGI 101 (343)
Q Consensus 24 ~~~~~~~~~~~~-~p~~l~~d~~g~~l~~-~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi 101 (343)
+..+++.++... .|.+++++++|+.+|+ ...++.|+.+|..+++......... . ......|.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~-------------~~~~~~~~~~ 87 (337)
T 1pby_B 22 AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST-P-------------EERVKSLFGA 87 (337)
T ss_dssp EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB-T-------------TEEEECTTCE
T ss_pred cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC-c-------------ccccccccce
Confidence 345556666433 4899999999986665 4557899999998766443211000 0 0001146789
Q ss_pred EEeCCCCeEEEEe------------CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccc
Q 019290 102 KFNPVTCDLYIAD------------AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRR 168 (343)
Q Consensus 102 ~~~~~~~~l~v~~------------~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~ 168 (343)
+++++++.||++. ....|+.+|.++++....... + ..+.++++++ ||+ +|+++
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~---~~~~~~~~s~-dg~~l~~~~-------- 153 (337)
T 1pby_B 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--P---RQITMLAWAR-DGSKLYGLG-------- 153 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--C---SSCCCEEECT-TSSCEEEES--------
T ss_pred EECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--C---CCcceeEECC-CCCEEEEeC--------
Confidence 9998555888885 235699999998876543322 1 3477899999 466 77752
Q ss_pred cceeeeeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCC-----------------------eE
Q 019290 169 QYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATL-----------------------KI 225 (343)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~-----------------------~i 225 (343)
+.|+.+|..+++.............++++++++.+|++....+ .|
T Consensus 154 ------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 154 ------------RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp ------------SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred ------------CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 3588999887776543332222334467888887777654443 46
Q ss_pred EEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CCE
Q 019290 226 LRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNV 303 (343)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~ 303 (343)
+++++.+... . ...+......+.+++++++|+ +|++ .. .|..+|.+ ++.
T Consensus 222 ~~~d~~~~~~-~-~~~~~~~~~~~~~~~~s~dg~~l~~~-~~--------------------------~v~~~d~~~~~~ 272 (337)
T 1pby_B 222 LTMDLETGEM-A-MREVRIMDVFYFSTAVNPAKTRAFGA-YN--------------------------VLESFDLEKNAS 272 (337)
T ss_dssp EEEETTTCCE-E-EEEEEECSSCEEEEEECTTSSEEEEE-ES--------------------------EEEEEETTTTEE
T ss_pred EEEeCCCCCc-e-EeecCCCCCceeeEEECCCCCEEEEe-CC--------------------------eEEEEECCCCcC
Confidence 7788765222 1 111111223466789999996 5555 33 77888875 555
Q ss_pred EEEeeCCCCCccCCceeEEE--eCCEEEEecCCCCeEEEEc
Q 019290 304 VDVLDGNEGNTLNSVSEVQE--YGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~--~~g~l~i~~~~~~~i~~~~ 342 (343)
...+..+. .+..+.. ++..||+++ ..+.|.+++
T Consensus 273 ~~~~~~~~-----~~~~~~~s~dg~~l~~~~-~~~~i~v~d 307 (337)
T 1pby_B 273 IKRVPLPH-----SYYSVNVSTDGSTVWLGG-ALGDLAAYD 307 (337)
T ss_dssp EEEEECSS-----CCCEEEECTTSCEEEEES-BSSEEEEEE
T ss_pred cceecCCC-----ceeeEEECCCCCEEEEEc-CCCcEEEEE
Confidence 55554322 2233333 345688874 467787776
No 92
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.34 E-value=2.2e-09 Score=93.69 Aligned_cols=235 Identities=14% Similarity=0.100 Sum_probs=143.3
Q ss_pred cccccCCCCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC
Q 019290 26 YQQLQLPGVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP 105 (343)
Q Consensus 26 ~~~~~~~~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (343)
.-++..++...++++++.++|++++ ..+++|+.+|++++..-.+.. .....+.+..+.+
T Consensus 28 ~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~~W~~~~-------------------~~~~~~~~~~~~~ 86 (276)
T 3no2_A 28 VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITRDGRELWNIAA-------------------PAGCEMQTARILP 86 (276)
T ss_dssp EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECTTSCEEEEEEC-------------------CTTCEEEEEEECT
T ss_pred EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECCCCCEEEEEcC-------------------CCCccccccEECC
Confidence 3444444334689999999999444 457789999995443334421 1112345677777
Q ss_pred CCCeEEEEeCC-Ce-EEEEeCCCCeEEEcccccC-CCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCce
Q 019290 106 VTCDLYIADAY-FG-LMVVGPNGGQAQQLASSAG-GIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 106 ~~~~l~v~~~~-~g-i~~~d~~~~~~~~~~~~~~-~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
++++++++.. ++ ++.+|+++..+..+..... ..+...+..+++++ +|++++++.. .+.
T Consensus 87 -dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~-----------------~~~ 147 (276)
T 3no2_A 87 -DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFA-----------------TSE 147 (276)
T ss_dssp -TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETT-----------------TTE
T ss_pred -CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecC-----------------CCE
Confidence 7888887655 44 8899986443333321111 11224567788888 5999998765 568
Q ss_pred EEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec--CC----CCCCceeeCC
Q 019290 183 LLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE--MP----RFPDNIKSDS 256 (343)
Q Consensus 183 v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~----~~p~~i~~d~ 256 (343)
|+.+|++ |+...-......+.++.+.+++. ++++...+++|..++.++.. ..-.+.. .+ ..|.++.+++
T Consensus 148 v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~---~~w~~~~~~~~~~~l~~~~~~~~~~ 222 (276)
T 3no2_A 148 VREIAPN-GQLLNSVKLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNR---IVRRVNANDIEGVQLFFVAQLFPLQ 222 (276)
T ss_dssp EEEECTT-SCEEEEEECSSCCCEEEECTTSC-EEEECBTTSEEEEECTTTCC---EEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred EEEECCC-CCEEEEEECCCCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCc---EEEEecCCCCCCccccccccceEcC
Confidence 9999998 65543232234577788888876 55666677899999987311 1112211 11 1266788899
Q ss_pred CCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeE
Q 019290 257 KGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEV 321 (343)
Q Consensus 257 ~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~ 321 (343)
+|++++++........ . . .....++++|++|+++=.+.... .+..++.+
T Consensus 223 ~G~i~v~~~~g~~~~~-~------~-------~~~~~~~~~~~~g~~~W~~~~~~--~~~~~~~~ 271 (276)
T 3no2_A 223 NGGLYICNWQGHDREA-G------K-------GKHPQLVEIDSEGKVVWQLNDKV--KFGMISTI 271 (276)
T ss_dssp TSCEEEEEECTTCTTG-G------G-------SCCCSEEEECTTSBEEEEECCTT--TSCCCCEE
T ss_pred CCCEEEEeccCccccc-c------c-------cCCceEEEECCCCCEEEEecCcc--cccceeee
Confidence 9999999863111000 0 0 00236889999999987775432 34445443
No 93
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=1.1e-10 Score=104.50 Aligned_cols=183 Identities=14% Similarity=0.125 Sum_probs=122.5
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
.|.+++++++|+ +|++. ..+|+++|+.++++..+..... ......++++++++ ++++|+++.
T Consensus 91 ~v~~i~~~~dg~-l~v~~-~~gl~~~d~~~g~~~~~~~~~~---------------~~~~~~~~~i~~d~-~G~l~v~~~ 152 (326)
T 2ghs_A 91 MGSALAKISDSK-QLIAS-DDGLFLRDTATGVLTLHAELES---------------DLPGNRSNDGRMHP-SGALWIGTM 152 (326)
T ss_dssp CEEEEEEEETTE-EEEEE-TTEEEEEETTTCCEEEEECSST---------------TCTTEEEEEEEECT-TSCEEEEEE
T ss_pred cceEEEEeCCCe-EEEEE-CCCEEEEECCCCcEEEEeeCCC---------------CCCCCCCCCEEECC-CCCEEEEeC
Confidence 688999999999 66655 4569999998887766532110 01123578899998 889999864
Q ss_pred C-------CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCC-eEEEEeCCcccccccceeeeeecCCCceEEEEe
Q 019290 116 Y-------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTG-IVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYD 187 (343)
Q Consensus 116 ~-------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg-~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 187 (343)
. .+|++++ +++++.+... ...++++++++ || .+|+++.. .+.|++++
T Consensus 153 ~~~~~~~~~~l~~~~--~g~~~~~~~~-----~~~~~~i~~s~-dg~~lyv~~~~-----------------~~~I~~~d 207 (326)
T 2ghs_A 153 GRKAETGAGSIYHVA--KGKVTKLFAD-----ISIPNSICFSP-DGTTGYFVDTK-----------------VNRLMRVP 207 (326)
T ss_dssp ETTCCTTCEEEEEEE--TTEEEEEEEE-----ESSEEEEEECT-TSCEEEEEETT-----------------TCEEEEEE
T ss_pred CCcCCCCceEEEEEe--CCcEEEeeCC-----CcccCCeEEcC-CCCEEEEEECC-----------------CCEEEEEE
Confidence 2 4699999 4666654321 23578999999 46 58998754 46799998
Q ss_pred CC--CC-ce---EEee---cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeC-CC
Q 019290 188 PL--KK-NV---TVMY---NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSD-SK 257 (343)
Q Consensus 188 ~~--~~-~~---~~~~---~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d-~~ 257 (343)
.+ ++ .. +.+. .....+.+++++++|. +|++....++|++|+.++. ....+......|.+++++ ++
T Consensus 208 ~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~----~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 208 LDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGN----HIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp BCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCC----EEEEEECSCSBEEEEEEESTT
T ss_pred cccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCC----EEEEEECCCCCcEEEEEecCC
Confidence 64 45 32 1221 1234578999998885 8888777789999997542 222222111236678886 66
Q ss_pred C-CEEEEecc
Q 019290 258 G-EFWIAMNS 266 (343)
Q Consensus 258 G-~lwi~~~~ 266 (343)
+ .||+++..
T Consensus 283 ~~~L~vt~~~ 292 (326)
T 2ghs_A 283 ASRLLVTSAR 292 (326)
T ss_dssp SCEEEEEEBC
T ss_pred CCEEEEEecC
Confidence 5 69999876
No 94
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.33 E-value=1.3e-09 Score=96.98 Aligned_cols=193 Identities=9% Similarity=0.100 Sum_probs=120.5
Q ss_pred CCceEEEcCCCCeeEEEe-cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVGV-SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~-~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
.|.+++++++|+.+|++. .++.|..||..++........ ......+.+++++++++.+|+++
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-----------------~~~~~~~~~~~~s~dg~~l~~~~ 147 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV-----------------VEGLDGCHSANISPDNRTLWVPA 147 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE-----------------ECCCTTBCCCEECTTSSEEEEEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccc-----------------ccCCCCceEEEECCCCCEEEEec
Confidence 799999999999777654 477899888742221111100 01223477899999555788886
Q ss_pred C-CCeEEEEeCCC-CeEEEcc--cccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeC-
Q 019290 115 A-YFGLMVVGPNG-GQAQQLA--SSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP- 188 (343)
Q Consensus 115 ~-~~gi~~~d~~~-~~~~~~~--~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~- 188 (343)
. ...|..++.++ ++..... .... .....+..+++++ +|+ +|++... .+.|..++.
T Consensus 148 ~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p-dg~~l~~~~~~-----------------~~~i~~~~~~ 208 (343)
T 1ri6_A 148 LKQDRICLFTVSDDGHLVAQDPAEVTT-VEGAGPRHMVFHP-NEQYAYCVNEL-----------------NSSVDVWELK 208 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEEC-STTCCEEEEEECT-TSSEEEEEETT-----------------TTEEEEEESS
T ss_pred CCCCEEEEEEecCCCceeeeccccccc-CCCCCcceEEECC-CCCEEEEEeCC-----------------CCEEEEEEec
Confidence 3 34588998876 6654322 1111 1123577899999 465 7776643 456777776
Q ss_pred -CCCceEEe--ec----C---CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee--cCCCCCCceeeCC
Q 019290 189 -LKKNVTVM--YN----G---LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA--EMPRFPDNIKSDS 256 (343)
Q Consensus 189 -~~~~~~~~--~~----~---~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~p~~i~~d~ 256 (343)
.+++.... .. . ...+.+++++++++.||++....+.|.+|+++... +..+.+. ...+.|.++++++
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~s~ 286 (343)
T 1ri6_A 209 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG--SVLSKEGFQPTETQPRGFNVDH 286 (343)
T ss_dssp CTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS--CCEEEEEEEECSSSCCCEEECT
T ss_pred CCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC--CceEEeeeecCCCccceEEECC
Confidence 33443211 11 1 12345799999999999988788999999987311 1122221 2233488999999
Q ss_pred CCC-EEEEecc
Q 019290 257 KGE-FWIAMNS 266 (343)
Q Consensus 257 ~G~-lwi~~~~ 266 (343)
+|+ +|++...
T Consensus 287 dg~~l~~~~~~ 297 (343)
T 1ri6_A 287 SGKYLIAAGQK 297 (343)
T ss_dssp TSSEEEEECTT
T ss_pred CCCEEEEecCC
Confidence 997 5666543
No 95
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.28 E-value=1.2e-08 Score=90.23 Aligned_cols=234 Identities=10% Similarity=0.006 Sum_probs=147.2
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++++.++++..++.|..||..+++....... ......+..+++++++..++++..
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-----------------~~~~~~i~~~~~~~~~~~l~~~~~ 161 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL-----------------TSSAPACYALAISPDSKVCFSCCS 161 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEE-----------------ECSSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeec-----------------ccCCCceEEEEECCCCCEEEEEeC
Confidence 467899999999888888999999999887653222110 112234678899984456666654
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...+..+|.++++........ ...+..+++.+ ++..+++... .+.|..||..+++...
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~----~~~i~~~~~~~-~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~ 219 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGH----TDGASCIDISN-DGTKLWTGGL-----------------DNTVRSWDLREGRQLQ 219 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCC----SSCEEEEEECT-TSSEEEEEET-----------------TSEEEEEETTTTEEEE
T ss_pred CCcEEEEeCCCCceeeeeecc----cCceEEEEECC-CCCEEEEEec-----------------CCcEEEEECCCCceEe
Confidence 445999999887654432221 13578899999 4765554322 4678899988776554
Q ss_pred eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcccccc
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNK 275 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~ 275 (343)
..........++++++++.+++.. .++.|..|++.... ...+.........++++++|+++++...
T Consensus 220 ~~~~~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------- 285 (337)
T 1gxr_A 220 QHDFTSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPD----KYQLHLHESCVLSLKFAYCGKWFVSTGK--------- 285 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSC----EEEECCCSSCEEEEEECTTSSEEEEEET---------
T ss_pred eecCCCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCC----eEEEcCCccceeEEEECCCCCEEEEecC---------
Confidence 444445578899999998776654 57889999987632 2222222233456788999987776655
Q ss_pred ccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 276 KTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
.+.+..++. .++........ ..+..+... +++++++......|.+++
T Consensus 286 ---------------dg~i~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 286 ---------------DNLLNAWRTPYGASIFQSKES-----SSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp ---------------TSEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ---------------CCcEEEEECCCCeEEEEecCC-----CcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 346777775 45555433321 234444433 455555555556666654
No 96
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.28 E-value=5.7e-10 Score=101.02 Aligned_cols=216 Identities=15% Similarity=0.137 Sum_probs=125.8
Q ss_pred cCCeeeEEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEccccc-CCCCccCcceeEEeCC---CCeEEEEeCCcccccccc
Q 019290 95 CGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSA-GGIPFRFTNDLDIDPN---TGIVYFTDSSIYFQRRQY 170 (343)
Q Consensus 95 ~~~p~gi~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~---dg~l~v~~~~~~~~~~~~ 170 (343)
...|.+|++++ +++|||++....|++++ +++.+.+.... .......+++|++++. ++.+|+++....
T Consensus 30 l~~P~~ia~~p-dG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~------ 100 (352)
T 2ism_A 30 LEVPWALAFLP-DGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAE------ 100 (352)
T ss_dssp CSCEEEEEECT-TSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECT------
T ss_pred CCCceEEEEcC-CCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCC------
Confidence 34689999998 88999998766699998 45554443221 1112357899999992 279999875310
Q ss_pred eeeeeecCCCceEEEEeCCCCc---eEEeec-------CCCCcceeEEecCCCEEEEEEc-------------CCCeEEE
Q 019290 171 FMSIATGDRSGRLLKYDPLKKN---VTVMYN-------GLSFPNGVALSNNNSFLLLAES-------------ATLKILR 227 (343)
Q Consensus 171 ~~~~~~~~~~~~v~~~d~~~~~---~~~~~~-------~~~~~~~i~~~~d~~~lyv~~~-------------~~~~i~~ 227 (343)
.....+|++++.+++. .+.+.. ....+.++++++|| .||++.. ..++|++
T Consensus 101 ------~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~r 173 (352)
T 2ism_A 101 ------GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILR 173 (352)
T ss_dssp ------TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEE
T ss_pred ------CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEE
Confidence 0001578888876442 222221 12246899999998 5999852 2368999
Q ss_pred EEccCcccc---------ccceeeecCCCCCCceeeCC-CCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEE
Q 019290 228 FWLQGERTT---------YTPQLFAEMPRFPDNIKSDS-KGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKF 297 (343)
Q Consensus 228 ~~~~~~~~~---------~~~~~~~~~~~~p~~i~~d~-~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 297 (343)
++.++.-.. ...++++..-.-|.++++|+ +|+||++++. ...+. + .+...+..+
T Consensus 174 i~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g-~~~~~-------~--------~~~dei~~i 237 (352)
T 2ism_A 174 LTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHG-PSGEQ-------G--------YGHDEVNLI 237 (352)
T ss_dssp ECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEEC-C---------------------CCCEEEEE
T ss_pred EcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcC-CCCCC-------C--------CCCeEEEEe
Confidence 998762100 12233332112388999999 7999999886 22100 0 000123344
Q ss_pred CCCCCE----------EEEeeCCCC--CccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 298 DVNGNV----------VDVLDGNEG--NTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 298 d~~g~~----------~~~~~~~~~--~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.+.. ..-+..|.. .....+..+...+|+||++....++|.+++
T Consensus 238 ~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~ 294 (352)
T 2ism_A 238 VPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLV 294 (352)
T ss_dssp CTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEECCEEEEEECCCCEEEEEE
Confidence 322100 000000000 011244556667999999999999998875
No 97
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.28 E-value=1.4e-09 Score=97.21 Aligned_cols=238 Identities=12% Similarity=0.047 Sum_probs=133.8
Q ss_pred cccccccCCCCCCCceEEEcCCCCeeEEE-ecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEE
Q 019290 24 KSYQQLQLPGVVGPESLAFDCNGEGPYVG-VSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIK 102 (343)
Q Consensus 24 ~~~~~~~~~~~~~p~~l~~d~~g~~l~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (343)
+..+++.++....|.+++++++|+.+|+. ..++.|+.+|..+++..........+ ......+.+++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~-------------~~~~~~~~~~~ 98 (349)
T 1jmx_B 32 TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP-------------GEVGRSMYSFA 98 (349)
T ss_dssp EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST-------------TEEEECSSCEE
T ss_pred cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc-------------ccccccccceE
Confidence 44556666643369999999999867754 46789999999876544221100000 00012367899
Q ss_pred EeCCCCeEEEEeCC------------CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCccccc--c
Q 019290 103 FNPVTCDLYIADAY------------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQR--R 168 (343)
Q Consensus 103 ~~~~~~~l~v~~~~------------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~--~ 168 (343)
++++++.||++... ..|+.+|.++++........... ..+.++++++ ||++|++... .+-+ .
T Consensus 99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~-dg~l~~~~~~-i~~~d~~ 174 (349)
T 1jmx_B 99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP--RQVYLMRAAD-DGSLYVAGPD-IYKMDVK 174 (349)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC--SSCCCEEECT-TSCEEEESSS-EEEECTT
T ss_pred ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC--CcccceeECC-CCcEEEccCc-EEEEeCC
Confidence 99855678888532 56999998875432221111111 2467888999 5888875321 1000 0
Q ss_pred cce--eeeeecC--------------------------------------------CCceEEEEeCCCCceEEee--cCC
Q 019290 169 QYF--MSIATGD--------------------------------------------RSGRLLKYDPLKKNVTVMY--NGL 200 (343)
Q Consensus 169 ~~~--~~~~~~~--------------------------------------------~~~~v~~~d~~~~~~~~~~--~~~ 200 (343)
... ..+.... ....++.++..+++++.+. ...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (349)
T 1jmx_B 175 TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLT 254 (349)
T ss_dssp TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECS
T ss_pred CCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCC
Confidence 000 0000000 0001122344333332221 112
Q ss_pred CCcceeEEec-CCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCC-CEEEEeccCCCccccccccc
Q 019290 201 SFPNGVALSN-NNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKG-EFWIAMNSARGKIESNKKTA 278 (343)
Q Consensus 201 ~~~~~i~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwi~~~~~~~~~~~~~~~~ 278 (343)
..+.++++++ +++.+|++ .+.|++|++.+. +..........|.+++++++| .||++. .
T Consensus 255 ~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~------------ 314 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQR----KLIKAANLDHTYYCVAFDKKGDKLYLGG-T------------ 314 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE---ESEEEEEETTTT----EEEEEEECSSCCCEEEECSSSSCEEEES-B------------
T ss_pred CcceeeEecCCCCCEEEEE---cCeEEEEECccC----eEEEEEcCCCCccceEECCCCCEEEEec-C------------
Confidence 3466778889 99999888 579999998652 221111233457889999998 577753 3
Q ss_pred cccccCCCcccCCCeEEEECCC-CCEEEEeeCC
Q 019290 279 FCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGN 310 (343)
Q Consensus 279 ~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~ 310 (343)
.+.|..+|.+ ++.+..+..+
T Consensus 315 ------------~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 315 ------------FNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp ------------SSEEEEEETTTTEEEEEEECS
T ss_pred ------------CCeEEEEeccccceeeeeecC
Confidence 2477888874 6667777655
No 98
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.27 E-value=1.4e-09 Score=92.87 Aligned_cols=190 Identities=14% Similarity=0.113 Sum_probs=125.7
Q ss_pred eeEEEeCCCCeEEEEeCCC---eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeee
Q 019290 99 LGIKFNPVTCDLYIADAYF---GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIA 175 (343)
Q Consensus 99 ~gi~~~~~~~~l~v~~~~~---gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~ 175 (343)
.|+.++ ++.||+++... .|.++|++++++..-..... ..+..+++++. +++|+.+..
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~---~~FgeGit~~g--~~ly~ltw~------------- 105 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK---RYFGEGISDWK--DKIVGLTWK------------- 105 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT---TCCEEEEEEET--TEEEEEESS-------------
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC---ccceeEEEEeC--CEEEEEEee-------------
Confidence 689998 47999996432 59999999998765433321 13445678876 699998764
Q ss_pred ecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCC----CCc
Q 019290 176 TGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRF----PDN 251 (343)
Q Consensus 176 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----p~~ 251 (343)
.+.++.||+++.+...-... ...|..+.+|++.||+++ ..++|+.+|+.+.....++.+- ..+. ++.
T Consensus 106 ----~~~v~v~D~~t~~~~~ti~~--~~eG~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~--~~g~~~~~lNE 176 (262)
T 3nol_A 106 ----NGLGFVWNIRNLRQVRSFNY--DGEGWGLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTITVT--AHGEELPELNE 176 (262)
T ss_dssp ----SSEEEEEETTTCCEEEEEEC--SSCCCCEEECSSCEEECC-SSSEEEEECTTTCSEEEEEECE--ETTEECCCEEE
T ss_pred ----CCEEEEEECccCcEEEEEEC--CCCceEEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEec--cCCccccccce
Confidence 56899999987776432222 125555557788899987 4789999997753321222221 1122 233
Q ss_pred eeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCC--------CccCCceeEE
Q 019290 252 IKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEG--------NTLNSVSEVQ 322 (343)
Q Consensus 252 i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~--------~~~~~~~~~~ 322 (343)
+... +|+||++.+. ...|+++|+ +|+++..+..+.- .......++.
T Consensus 177 Le~~-~G~lyan~w~------------------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA 231 (262)
T 3nol_A 177 LEWV-DGEIFANVWQ------------------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIA 231 (262)
T ss_dssp EEEE-TTEEEEEETT------------------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEE
T ss_pred eEEE-CCEEEEEEcc------------------------CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEE
Confidence 5554 7999999987 458999998 6888888764311 0112334444
Q ss_pred Ee--CCEEEEecCCCCeEEEEc
Q 019290 323 EY--GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 323 ~~--~g~l~i~~~~~~~i~~~~ 342 (343)
.+ .++||+++..=..+..++
T Consensus 232 ~dp~~~~lfVTGK~Wp~~~ev~ 253 (262)
T 3nol_A 232 WDKEHHRLFVTGKLWPKVFEIT 253 (262)
T ss_dssp EETTTTEEEEEETTCSEEEEEE
T ss_pred EcCCCCEEEEECCCCCceEEEE
Confidence 33 789999998888877664
No 99
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.27 E-value=1e-08 Score=87.93 Aligned_cols=199 Identities=8% Similarity=0.038 Sum_probs=128.8
Q ss_pred CCeeeEEEeCCCCeEEEEeCCC-eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeee
Q 019290 96 GRPLGIKFNPVTCDLYIADAYF-GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSI 174 (343)
Q Consensus 96 ~~p~gi~~~~~~~~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~ 174 (343)
..+.|++++++.++||++.... .|+++|++ +++..-.... + ..-+.+|++++ +|.+|+++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~-g--~~D~EGIa~~~-~g~~~vs~E~------------ 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLD-F--VKDLETIEYIG-DNQFVISDER------------ 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECS-S--CSSEEEEEECS-TTEEEEEETT------------
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecC-C--CCChHHeEEeC-CCEEEEEECC------------
Confidence 3578999998678899754444 49999998 6654432221 1 13477899998 5999998754
Q ss_pred eecCCCceEEEEeCCC-Cce---EEeecC------CCCcceeEEecCCCEEEEEEcCCC-eEEEEEccCccccccceee-
Q 019290 175 ATGDRSGRLLKYDPLK-KNV---TVMYNG------LSFPNGVALSNNNSFLLLAESATL-KILRFWLQGERTTYTPQLF- 242 (343)
Q Consensus 175 ~~~~~~~~v~~~d~~~-~~~---~~~~~~------~~~~~~i~~~~d~~~lyv~~~~~~-~i~~~~~~~~~~~~~~~~~- 242 (343)
.++++.++... +.. ...... -....|++++++++.||++..... .|+.++ +-.......+.
T Consensus 90 -----~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~ 162 (255)
T 3qqz_A 90 -----DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISK 162 (255)
T ss_dssp -----TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEE
T ss_pred -----CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeec
Confidence 34566664322 221 111111 122489999999989999865544 788887 21000111111
Q ss_pred ----ec--CCCCCCceeeCCC-CCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCC--
Q 019290 243 ----AE--MPRFPDNIKSDSK-GEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGN-- 313 (343)
Q Consensus 243 ----~~--~~~~p~~i~~d~~-G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~-- 313 (343)
.. .-.-+.++++|+. |++|+.+.. ...|..+|.+|+.+..+....+.
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~------------------------s~~L~~~d~~g~~~~~~~L~~g~~~ 218 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHE------------------------SRALQEVTLVGEVIGEMSLTKGSRG 218 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETT------------------------TTEEEEECTTCCEEEEEECSTTGGG
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECC------------------------CCeEEEEcCCCCEEEEEEcCCccCC
Confidence 00 0113678999984 789999887 45888999999988888766442
Q ss_pred ---ccCCceeEEEe-CCEEEEecCCCCeEEEEcC
Q 019290 314 ---TLNSVSEVQEY-GEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 314 ---~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~~ 343 (343)
.+..+-++..+ +|+|||.+-. |.+++|+.
T Consensus 219 l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~ 251 (255)
T 3qqz_A 219 LSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTP 251 (255)
T ss_dssp CSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC
T ss_pred cccccCCCCeeEECCCCCEEEEcCC-ceEEEEEe
Confidence 23455566555 8999999655 78988863
No 100
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.26 E-value=7.4e-10 Score=94.61 Aligned_cols=192 Identities=15% Similarity=0.173 Sum_probs=124.7
Q ss_pred eeeEEEeCCCCeEEEEeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeee
Q 019290 98 PLGIKFNPVTCDLYIADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIAT 176 (343)
Q Consensus 98 p~gi~~~~~~~~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~ 176 (343)
..|+.++ ++.||+++...| |.++|++++++..-. .. . ..+..+++++. +++|+.+..
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~--~~FgeGit~~g--~~Ly~ltw~-------------- 114 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RL-G--NIFAEGLASDG--ERLYQLTWT-------------- 114 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-T--TCCEEEEEECS--SCEEEEESS--------------
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-C--CcceeEEEEeC--CEEEEEEcc--------------
Confidence 3688888 589999976544 999999999865433 21 1 12345678876 699998754
Q ss_pred cCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC-C-CCCCceee
Q 019290 177 GDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM-P-RFPDNIKS 254 (343)
Q Consensus 177 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~-~~p~~i~~ 254 (343)
.+.++.||+++.+...-.... +.|..+.+|++.||+++ .+++|+.+|..+...+.++++-... + ..++.+..
T Consensus 115 ---~~~v~V~D~~Tl~~~~ti~~~--~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~ 188 (268)
T 3nok_A 115 ---EGLLFTWSGMPPQRERTTRYS--GEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC 188 (268)
T ss_dssp ---SCEEEEEETTTTEEEEEEECS--SCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred ---CCEEEEEECCcCcEEEEEeCC--CceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE
Confidence 578999999887765333222 34444556788999997 5899999997653321222221110 0 12234444
Q ss_pred CCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCC---------CCCccCCceeEEEe
Q 019290 255 DSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGN---------EGNTLNSVSEVQEY 324 (343)
Q Consensus 255 d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~---------~~~~~~~~~~~~~~ 324 (343)
. +|+||++.+. ...|.+||+ +|+++..+... .....+...++.-+
T Consensus 189 ~-dG~lyanvw~------------------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~d 243 (268)
T 3nok_A 189 A-NGVIYANIWH------------------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVE 243 (268)
T ss_dssp E-TTEEEEEETT------------------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEEC
T ss_pred e-CCEEEEEECC------------------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEc
Confidence 4 7899999887 458899998 58887777532 01111233444433
Q ss_pred --CCEEEEecCCCCeEEEEc
Q 019290 325 --GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 325 --~g~l~i~~~~~~~i~~~~ 342 (343)
.++||+++..=..+..++
T Consensus 244 p~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 244 PGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp TTTCCEEEEETTCSEEEEEE
T ss_pred CCCCEEEEeCCCCCceEEEE
Confidence 688999998888777664
No 101
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.25 E-value=1.7e-09 Score=97.92 Aligned_cols=158 Identities=16% Similarity=0.153 Sum_probs=101.1
Q ss_pred CcCCeeeEEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEccccc-CCCCccCcceeEEeCC---CCeEEEEeCC-cccccc
Q 019290 94 LCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSA-GGIPFRFTNDLDIDPN---TGIVYFTDSS-IYFQRR 168 (343)
Q Consensus 94 ~~~~p~gi~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~---dg~l~v~~~~-~~~~~~ 168 (343)
....|.+|++++ +++|||++....|++++.+ ++ +.+.... .......+++|++++. ++.||++... ..
T Consensus 27 ~l~~P~~ia~~p-dG~l~V~e~~g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~---- 99 (354)
T 3a9g_A 27 DLEVPWSIAPLG-GGRYLVTERPGRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE---- 99 (354)
T ss_dssp SCSCEEEEEEEE-TTEEEEEETTTEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG----
T ss_pred CCCCCeEEEEcC-CCeEEEEeCCCEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC----
Confidence 345799999998 8899999876669999854 55 4432211 1112356899999983 3899997642 00
Q ss_pred cceeeeeecCCCceEEEEeCCCC--c---eEEeec-----CCCCcceeEEecCCCEEEEEEc-------------CCCeE
Q 019290 169 QYFMSIATGDRSGRLLKYDPLKK--N---VTVMYN-----GLSFPNGVALSNNNSFLLLAES-------------ATLKI 225 (343)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~d~~~~--~---~~~~~~-----~~~~~~~i~~~~d~~~lyv~~~-------------~~~~i 225 (343)
.+....+|++++.+.+ . .+.+.. ..-.++++++++||. ||++.- ..++|
T Consensus 100 -------~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I 171 (354)
T 3a9g_A 100 -------GGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKI 171 (354)
T ss_dssp -------GGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEE
T ss_pred -------CCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEE
Confidence 0000256888886543 1 222221 122468899999985 999842 23689
Q ss_pred EEEEccCcccc----ccceeeecCCCCCCceeeCC-CCCEEEEecc
Q 019290 226 LRFWLQGERTT----YTPQLFAEMPRFPDNIKSDS-KGEFWIAMNS 266 (343)
Q Consensus 226 ~~~~~~~~~~~----~~~~~~~~~~~~p~~i~~d~-~G~lwi~~~~ 266 (343)
+|++.++.-.. ...++++..-.-|.++++|+ +|+||++++.
T Consensus 172 ~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g 217 (354)
T 3a9g_A 172 LRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHG 217 (354)
T ss_dssp EEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECC
T ss_pred EEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecC
Confidence 99998763100 02344443222389999999 7999999886
No 102
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.24 E-value=4e-09 Score=98.55 Aligned_cols=177 Identities=16% Similarity=0.162 Sum_probs=110.0
Q ss_pred CCCCCCceEEEcCCCCeeEEEecC-CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC---C
Q 019290 32 PGVVGPESLAFDCNGEGPYVGVSD-GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV---T 107 (343)
Q Consensus 32 ~~~~~p~~l~~d~~g~~l~~~~~~-g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~ 107 (343)
.++..|.+|+++++|+ +|++... ++|+++++.++....+...+... ........+.||+++++ +
T Consensus 24 ~~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~-----------~~~~g~~Gllgia~~Pdf~~~ 91 (454)
T 1cru_A 24 SNLNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIV-----------NDADGQNGLLGFAFHPDFKNN 91 (454)
T ss_dssp CCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCC-----------CCTTSSCSEEEEEECTTTTTS
T ss_pred CCCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccc-----------cccCCCCceeEEEECCCcCcC
Confidence 3577899999999999 6665555 47999987666665554221100 00012345789999985 7
Q ss_pred CeEEEEeCC-------------CeEEEEeCCC--Ce---EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccc---
Q 019290 108 CDLYIADAY-------------FGLMVVGPNG--GQ---AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQ--- 166 (343)
Q Consensus 108 ~~l~v~~~~-------------~gi~~~d~~~--~~---~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~--- 166 (343)
+.||++.+. ..|++++.+. ++ .+.+............+.|++++ ||.||++.......
T Consensus 92 g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~ 170 (454)
T 1cru_A 92 PYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLA 170 (454)
T ss_dssp CEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGG
T ss_pred CEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCcc
Confidence 899999642 3588887543 22 22332212222235688999999 69999986432110
Q ss_pred ----ccccee--------eeeecCCCceEEEEeCCCC-----------ceEEeecCCCCcceeEEecCCCEEEEEEcCC
Q 019290 167 ----RRQYFM--------SIATGDRSGRLLKYDPLKK-----------NVTVMYNGLSFPNGVALSNNNSFLLLAESAT 222 (343)
Q Consensus 167 ----~~~~~~--------~~~~~~~~~~v~~~d~~~~-----------~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~ 222 (343)
..+... ........++|+|+++++. ..+.+..+++.+.++++++++ .||+++...
T Consensus 171 ~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G-~L~~~d~g~ 248 (454)
T 1cru_A 171 YLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNG-KLLQSEQGP 248 (454)
T ss_dssp GTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTS-CEEEEEECS
T ss_pred ccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCC-CEEEEecCC
Confidence 000000 0000112578999998854 345566778889999999975 599988643
No 103
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.24 E-value=9.8e-09 Score=86.91 Aligned_cols=192 Identities=15% Similarity=0.085 Sum_probs=126.1
Q ss_pred CeeeEEEeCCCCeEEEEeCCC---eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceee
Q 019290 97 RPLGIKFNPVTCDLYIADAYF---GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMS 173 (343)
Q Consensus 97 ~p~gi~~~~~~~~l~v~~~~~---gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~ 173 (343)
...|+.++. +.||+++... .|.++|++++++..-...... .+..+++++. +++|+.+..
T Consensus 22 ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~---~fgeGi~~~~--~~ly~ltw~----------- 83 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP---YFGAGIVAWR--DRLIQLTWR----------- 83 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT---CCEEEEEEET--TEEEEEESS-----------
T ss_pred ccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC---cceeEEEEeC--CEEEEEEee-----------
Confidence 346999984 7999996543 599999999988654332211 2345677775 799998754
Q ss_pred eeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCC----CC
Q 019290 174 IATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPR----FP 249 (343)
Q Consensus 174 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~p 249 (343)
.+.++.||+++.+...-.... ..|..+..|++.||+++ .+++|+.+|+.+-....++++- ..+ ..
T Consensus 84 ------~~~v~v~D~~tl~~~~ti~~~--~~Gwglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~--~~g~~~~~l 152 (243)
T 3mbr_X 84 ------NHEGFVYDLATLTPRARFRYP--GEGWALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVT--AGGRPLDNL 152 (243)
T ss_dssp ------SSEEEEEETTTTEEEEEEECS--SCCCEEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECE--ETTEECCCE
T ss_pred ------CCEEEEEECCcCcEEEEEeCC--CCceEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEc--cCCcccccc
Confidence 578999999887764323222 24555567888899997 5889999997653321222211 111 12
Q ss_pred CceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCC---------CccCCce
Q 019290 250 DNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEG---------NTLNSVS 319 (343)
Q Consensus 250 ~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~---------~~~~~~~ 319 (343)
+.+... +|++|+..+. ...|.++|+ +|+++..+....- .......
T Consensus 153 NeLe~~-~G~lyanvw~------------------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlN 207 (243)
T 3mbr_X 153 NELEWV-NGELLANVWL------------------------TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLN 207 (243)
T ss_dssp EEEEEE-TTEEEEEETT------------------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEE
T ss_pred eeeEEe-CCEEEEEECC------------------------CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceE
Confidence 334433 7899999887 458899998 6888877753210 0112333
Q ss_pred eEEEe--CCEEEEecCCCCeEEEEc
Q 019290 320 EVQEY--GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 320 ~~~~~--~g~l~i~~~~~~~i~~~~ 342 (343)
++.-+ .++||+++..=..+..++
T Consensus 208 GIA~d~~~~~lfVTGK~wp~~~~v~ 232 (243)
T 3mbr_X 208 GIAFDAEHDRLFVTGKRWPMLYEIR 232 (243)
T ss_dssp EEEEETTTTEEEEEETTCSEEEEEE
T ss_pred EEEEcCCCCEEEEECCCCCcEEEEE
Confidence 44333 789999999888877664
No 104
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.23 E-value=8.3e-09 Score=99.10 Aligned_cols=251 Identities=12% Similarity=0.094 Sum_probs=154.5
Q ss_pred ccccccccCCCCCCCceEEEcCCCCeeEEEecCCEEEEEEcC--CCCeE-EeeecCCCccccccCCCCCcccCCCcCCee
Q 019290 23 SKSYQQLQLPGVVGPESLAFDCNGEGPYVGVSDGRILKWKAA--NSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPL 99 (343)
Q Consensus 23 ~~~~~~~~~~~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 99 (343)
.+.+.++.++. .|+++++++||+.+|++..++.|..+|.. +.+.. .+ .....|.
T Consensus 187 ~~v~~~i~~g~--~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i---------------------~~G~~P~ 243 (567)
T 1qks_A 187 YEIKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI---------------------KIGSEAR 243 (567)
T ss_dssp CCEEEEEECSS--CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE---------------------ECCSEEE
T ss_pred CeEEEEEeCCC--CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE---------------------ecCCCCc
Confidence 34455565554 68999999999999988888999999985 43321 22 1223588
Q ss_pred eEEEe----CCCCeEEEEeCC-CeEEEEeCCCCeEEEccccc----CC---CCccCcceeEEeCCCCeEEEEeCCccccc
Q 019290 100 GIKFN----PVTCDLYIADAY-FGLMVVGPNGGQAQQLASSA----GG---IPFRFTNDLDIDPNTGIVYFTDSSIYFQR 167 (343)
Q Consensus 100 gi~~~----~~~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~~----~~---~~~~~~~~i~~d~~dg~l~v~~~~~~~~~ 167 (343)
+++++ ++++.+|+++.. ..+..+|..+.+........ .. .+...+..+...+.+..++++...
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~----- 318 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE----- 318 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT-----
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC-----
Confidence 99999 556789999754 45889998887654432211 00 011234566666632334443322
Q ss_pred ccceeeeeecCCCceEEEEeCCCCceEE--eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC
Q 019290 168 RQYFMSIATGDRSGRLLKYDPLKKNVTV--MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM 245 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (343)
.+.|+.+|....+... .......+.++.++++++++|++....+.|.++|..+... ......
T Consensus 319 ------------~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl----~~~i~v 382 (567)
T 1qks_A 319 ------------TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL----VAIEDT 382 (567)
T ss_dssp ------------TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE----EEEEEC
T ss_pred ------------CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE----EEEEec
Confidence 5789989876432111 1223456778899999999999998889999999875322 111122
Q ss_pred -CC--CC-Ccee-eCCC-CCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC--------CCEEEEeeCCC
Q 019290 246 -PR--FP-DNIK-SDSK-GEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN--------GNVVDVLDGNE 311 (343)
Q Consensus 246 -~~--~p-~~i~-~d~~-G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~--------g~~~~~~~~~~ 311 (343)
.. +| .+.. ++++ |.+|++.+.. .+.|..||.+ .+.+..+....
T Consensus 383 gg~~Phpg~g~~~~~p~~g~v~~t~~~g-----------------------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g 439 (567)
T 1qks_A 383 GGQTPHPGRGANFVHPTFGPVWATSHMG-----------------------DDSVALIGTDPEGHPDNAWKILDSFPALG 439 (567)
T ss_dssp SSSSBCCTTCEEEEETTTEEEEEEEBSS-----------------------SSEEEEEECCTTTCTTTBTSEEEEEECSC
T ss_pred cCcCCCCccceeeECCCCCcEEEeCCCC-----------------------CCeEEEecCCCCCCccccCEEEEEEecCC
Confidence 11 23 3543 5776 7899887641 1356677653 45666665432
Q ss_pred CCccCCceeEEEeCCEEEEecC-C-----CCeEEEEc
Q 019290 312 GNTLNSVSEVQEYGEYLYTGSS-V-----QPYVVVIK 342 (343)
Q Consensus 312 ~~~~~~~~~~~~~~g~l~i~~~-~-----~~~i~~~~ 342 (343)
+ ...+-...++..+||+.+. + +++|.+|+
T Consensus 440 ~--g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 440 G--GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp S--CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred C--CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 1 1122223345678999884 3 45888886
No 105
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.20 E-value=2.4e-08 Score=90.20 Aligned_cols=242 Identities=12% Similarity=0.104 Sum_probs=153.0
Q ss_pred CCCCCCceEEEc-CCCCeeEEEecCC------EEEEEEcC--------CCCe-EEeeecCCCccccccCCCCCcccCCCc
Q 019290 32 PGVVGPESLAFD-CNGEGPYVGVSDG------RILKWKAA--------NSGW-TEFATTAPHRAREICDGSTNTTLEPLC 95 (343)
Q Consensus 32 ~~~~~p~~l~~d-~~g~~l~~~~~~g------~i~~~d~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (343)
|...-|-++++| .+|+ +|++...- .|-.++.. +... ..|+. . ..| ...
T Consensus 23 p~n~~P~gv~vd~~~gR-iFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~----w--~~~---------~~l 86 (381)
T 3q6k_A 23 PDNMISTAFAYDAEGEK-LFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSG----H--KTG---------KEL 86 (381)
T ss_dssp GGGCCCCEEEEETTTTE-EEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTT----C--SSS---------CSS
T ss_pred cCccceeeeeeecCCCc-EEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCC----C--ccc---------cce
Confidence 443458899995 7777 77665431 34444432 1122 33321 0 122 334
Q ss_pred CCeeeEEEeCCCCeEEEEeCC-------------C---eEEEEeCCCC--eEEEcccc--cCCCCccCcceeEEe-C--C
Q 019290 96 GRPLGIKFNPVTCDLYIADAY-------------F---GLMVVGPNGG--QAQQLASS--AGGIPFRFTNDLDID-P--N 152 (343)
Q Consensus 96 ~~p~gi~~~~~~~~l~v~~~~-------------~---gi~~~d~~~~--~~~~~~~~--~~~~~~~~~~~i~~d-~--~ 152 (343)
..+.++.+|+ .++|||.|++ . .|..+|++++ ++...... ....+...++++++| . .
T Consensus 87 vsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 87 TSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred EEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 4578999998 9999999865 1 3889999998 65433222 112234678999999 2 1
Q ss_pred ----CCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeec-----C--------------CCCcceeEEe
Q 019290 153 ----TGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYN-----G--------------LSFPNGVALS 209 (343)
Q Consensus 153 ----dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-----~--------------~~~~~~i~~~ 209 (343)
++.+|++|.. ..+|..||..+++..++.. + ..+..+|+++
T Consensus 166 ~~c~~~~aYItD~~-----------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLs 228 (381)
T 3q6k_A 166 GDCSETFVYITNFL-----------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLG 228 (381)
T ss_dssp TTSCSEEEEEEETT-----------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEEC
T ss_pred CCCCccEEEEEcCC-----------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEec
Confidence 3679999975 4567777777666544331 1 1356889999
Q ss_pred cC----CCEEEEEEcCCCeEEEEEcc---CccccccceeeecCCCCCC--ceeeC-CCCCEEEEeccCCCcccccccccc
Q 019290 210 NN----NSFLLLAESATLKILRFWLQ---GERTTYTPQLFAEMPRFPD--NIKSD-SKGEFWIAMNSARGKIESNKKTAF 279 (343)
Q Consensus 210 ~d----~~~lyv~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~p~--~i~~d-~~G~lwi~~~~~~~~~~~~~~~~~ 279 (343)
++ ++.||+....+..++++... .......++.+.+.....+ +++.| .+|+||++...
T Consensus 229 p~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~------------- 295 (381)
T 3q6k_A 229 DRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEAN------------- 295 (381)
T ss_dssp CCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESS-------------
T ss_pred CCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEecc-------------
Confidence 98 88999998888889998743 1111023333333221134 35676 78999999887
Q ss_pred ccccCCCcccCCCeEEEECCCC-C-----EEEEeeCCCCCccCCceeEEEe-CCEEEEecCC
Q 019290 280 CEETAKPWFLRDPVGVKFDVNG-N-----VVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSV 334 (343)
Q Consensus 280 ~~~~~~~~~~~~~~v~~~d~~g-~-----~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~ 334 (343)
.++|.|.++++ . ....++++ ....+..+..+ +|+||+.+..
T Consensus 296 -----------~~aI~~w~~~~~~~~~~n~~~l~~d~---~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 296 -----------TKQVSCWNTQKMPLRMKNTDVVYTSS---RFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp -----------SSEEEEEETTSCSBCGGGEEEEEECT---TCCSEEEEEECTTSCEEEEECS
T ss_pred -----------CCeEEEEeCCCCccccCceEEEEECC---CccccCeEEECCCCeEEEEECc
Confidence 56899999987 2 24444544 35677777775 8899997754
No 106
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.20 E-value=2.9e-09 Score=93.86 Aligned_cols=162 Identities=14% Similarity=0.086 Sum_probs=105.2
Q ss_pred CcCCeeeEEEeCCCCeEEEEeCCC-eEEEEeCCCCeEEEcc-cccC--CCCccCcceeEE---eCCCCeEEEE-eCCccc
Q 019290 94 LCGRPLGIKFNPVTCDLYIADAYF-GLMVVGPNGGQAQQLA-SSAG--GIPFRFTNDLDI---DPNTGIVYFT-DSSIYF 165 (343)
Q Consensus 94 ~~~~p~gi~~~~~~~~l~v~~~~~-gi~~~d~~~~~~~~~~-~~~~--~~~~~~~~~i~~---d~~dg~l~v~-~~~~~~ 165 (343)
....|.++.+++.++.+|+++... +|.++++.++.+..+. .... +.+...+.+|.+ |+ +|+||+. +.+..|
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccc
Confidence 344688999998789999998665 4999999866554442 1111 333346789999 78 5999984 422112
Q ss_pred ccccceeeeeecCCCceEEEEeCC---CCceEEeec--------------CCCCcceeEEecCCCEEEEEEcCC-CeEEE
Q 019290 166 QRRQYFMSIATGDRSGRLLKYDPL---KKNVTVMYN--------------GLSFPNGVALSNNNSFLLLAESAT-LKILR 227 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~d~~---~~~~~~~~~--------------~~~~~~~i~~~~d~~~lyv~~~~~-~~i~~ 227 (343)
...... ..+...|.+||+. +++...... ....+++++++++|+ .||+++.. +.|++
T Consensus 90 ~~~g~~-----~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~r 163 (334)
T 2p9w_A 90 NFADQS-----SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIAR 163 (334)
T ss_dssp CTTSCC-----SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEE
T ss_pred cccccc-----cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEE
Confidence 111000 0124569999987 555432221 123489999999886 89998888 99999
Q ss_pred EEccCccccccceeee-cC-C----CCCCceeeCCCCCEEEEecc
Q 019290 228 FWLQGERTTYTPQLFA-EM-P----RFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~-~----~~p~~i~~d~~G~lwi~~~~ 266 (343)
++.++... ..+. .. + ..+.||+++++|+++++...
T Consensus 164 V~pdG~~~----~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 164 VSADGKTV----STFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp ECTTSCCE----EEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred EeCCCCEE----eeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 99887421 2221 11 1 12679999999988887765
No 107
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.19 E-value=3.8e-09 Score=90.17 Aligned_cols=165 Identities=19% Similarity=0.190 Sum_probs=115.9
Q ss_pred ccccccccCCCCCCCceEEEcCCCCeeEEE-ecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeee
Q 019290 23 SKSYQQLQLPGVVGPESLAFDCNGEGPYVG-VSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLG 100 (343)
Q Consensus 23 ~~~~~~~~~~~~~~p~~l~~d~~g~~l~~~-~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (343)
-+.++++.++.-...++++.+ |+.+|.. ..++.++.||+++.+.. .|.. .....|
T Consensus 75 gkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~---------------------~~eG~g 131 (262)
T 3nol_A 75 GKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNY---------------------DGEGWG 131 (262)
T ss_dssp CCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEEC---------------------SSCCCC
T ss_pred CcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEEC---------------------CCCceE
Confidence 556677777754456778876 4457755 45789999999886533 3321 113356
Q ss_pred EEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEcccc-cCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCC
Q 019290 101 IKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASS-AGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 101 i~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~-~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
++.+ ++.||+++..+.|+.+|+++.++..-... ..+.+...+|.+... +|++|+....
T Consensus 132 lt~d--g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~----------------- 190 (262)
T 3nol_A 132 LTHN--DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQ----------------- 190 (262)
T ss_dssp EEEC--SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT-----------------
T ss_pred EecC--CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEcc-----------------
Confidence 6654 67899997555699999998776543332 233445667777776 3899997754
Q ss_pred CceEEEEeCCCCceEEeecC-------------CCCcceeEEecCCCEEEEEEcCCCeEEEEEcc
Q 019290 180 SGRLLKYDPLKKNVTVMYNG-------------LSFPNGVALSNNNSFLLLAESATLKILRFWLQ 231 (343)
Q Consensus 180 ~~~v~~~d~~~~~~~~~~~~-------------~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~ 231 (343)
.+.|.++|++++++...... ...+||||++++++.||++.-....++.+.+.
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 56899999999987543211 13579999999999999999888999887754
No 108
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.19 E-value=7.3e-09 Score=93.49 Aligned_cols=204 Identities=13% Similarity=0.104 Sum_probs=117.8
Q ss_pred CCCceEEEcCCCCeeEEEe-cCCEEEEEEcCCC-CeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 35 VGPESLAFDCNGEGPYVGV-SDGRILKWKAANS-GWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 35 ~~p~~l~~d~~g~~l~~~~-~~g~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
..|..+++ +|+.+|++. .++.+..|+.... ....+....... +.+..........+++++++++++.||+
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFK------GSGPDKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECC------CCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEcc------CCCCCccccCCCcceEEEECCCCCEEEE
Confidence 46888888 777677554 5778888887532 221110000000 0000000112335688999994446999
Q ss_pred EeCCC-eEEEEeC--CCC----e-EEEc---ccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCC
Q 019290 113 ADAYF-GLMVVGP--NGG----Q-AQQL---ASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRS 180 (343)
Q Consensus 113 ~~~~~-gi~~~d~--~~~----~-~~~~---~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
++... .+..++. .++ + +... ... .......+..+++++ ||+ +|+++.. .
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~sp-dg~~l~v~~~~-----------------~ 232 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF-KVAPGSGPRHLIFNS-DGKFAYLINEI-----------------G 232 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE-ECCTTCCEEEEEECT-TSSEEEEEETT-----------------T
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccce-ecCCCCCCeEEEEcC-CCCEEEEEcCC-----------------C
Confidence 87643 4666654 343 2 2111 000 011124578899999 575 7786643 4
Q ss_pred ceEEEEeCCCCceEEee------cCCCCcceeEEecCCCEEEEEEcC-CCeEEEEEccCc-cccccceeeecCCCCCCce
Q 019290 181 GRLLKYDPLKKNVTVMY------NGLSFPNGVALSNNNSFLLLAESA-TLKILRFWLQGE-RTTYTPQLFAEMPRFPDNI 252 (343)
Q Consensus 181 ~~v~~~d~~~~~~~~~~------~~~~~~~~i~~~~d~~~lyv~~~~-~~~i~~~~~~~~-~~~~~~~~~~~~~~~p~~i 252 (343)
+.|..|+.++++.+.+. .....+.++++++||+.||+++.. .+.|.+|+++.. ..+.....+. ....|.++
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~g~~~~~~ 311 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-TGIHPRNF 311 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-CSSCCCEE
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-CCCCCceE
Confidence 56777776666654322 122446799999999999999877 788999988621 1101111221 23368899
Q ss_pred eeCCCCC-EEEEecc
Q 019290 253 KSDSKGE-FWIAMNS 266 (343)
Q Consensus 253 ~~d~~G~-lwi~~~~ 266 (343)
+++++|+ ||++...
T Consensus 312 ~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 312 IITPNGKYLLVACRD 326 (361)
T ss_dssp EECTTSCEEEEEETT
T ss_pred EECCCCCEEEEEECC
Confidence 9999997 6666544
No 109
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.18 E-value=5.2e-09 Score=96.57 Aligned_cols=240 Identities=10% Similarity=-0.007 Sum_probs=140.6
Q ss_pred ccccccccCCCCCCCceEEEcCCCCeeEEEe----------cCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCccc
Q 019290 23 SKSYQQLQLPGVVGPESLAFDCNGEGPYVGV----------SDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTL 91 (343)
Q Consensus 23 ~~~~~~~~~~~~~~p~~l~~d~~g~~l~~~~----------~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 91 (343)
.+.+.+++++. .| ++++++||+.+|++. .++.|..+|..+.+.. .+..... .+
T Consensus 109 ~~vv~~I~vG~--~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~-------------~r 172 (426)
T 3c75_H 109 GRILGMTDGGF--LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDA-------------PR 172 (426)
T ss_dssp TEEEEEEEECS--SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC-------------CC
T ss_pred CEEEEEEECCC--CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCc-------------cc
Confidence 55667777775 68 999999999899765 3567999999886643 3321100 00
Q ss_pred CCCcCCeeeEEEeCCCCeEEEEeCC--CeEEEEeCCCCeEEEcccccCCCCccCcc----eeEEeCCCCeEEEEeCCc-c
Q 019290 92 EPLCGRPLGIKFNPVTCDLYIADAY--FGLMVVGPNGGQAQQLASSAGGIPFRFTN----DLDIDPNTGIVYFTDSSI-Y 164 (343)
Q Consensus 92 ~~~~~~p~gi~~~~~~~~l~v~~~~--~gi~~~d~~~~~~~~~~~~~~~~~~~~~~----~i~~d~~dg~l~v~~~~~-~ 164 (343)
......|+++.++++++.+|+++.. +.|.++|.+++++..-...... ....+. -+++.+ ||++.+.+... .
T Consensus 173 ~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-~~~~p~g~~~~v~~~~-dG~~~~V~~~~~~ 250 (426)
T 3c75_H 173 FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-YHIFPASPTVFYMNCR-DGSLARVDFADGE 250 (426)
T ss_dssp CCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEET-TSSEEEEECCTTC
T ss_pred cccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-eeeccCCCcEEEEEcC-CCCEEEEECCCCc
Confidence 0112458999999977789999753 4599999999876543222110 001111 245556 46544433311 0
Q ss_pred --------cccccc-----------eeeeeecCCCceEEEEeCCCCceEEeec----------CCCCcce---eEEecCC
Q 019290 165 --------FQRRQY-----------FMSIATGDRSGRLLKYDPLKKNVTVMYN----------GLSFPNG---VALSNNN 212 (343)
Q Consensus 165 --------~~~~~~-----------~~~~~~~~~~~~v~~~d~~~~~~~~~~~----------~~~~~~~---i~~~~d~ 212 (343)
+..... ...++.....+.|+.+|..++....+.. ....+.+ +++++++
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg 330 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS 330 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG
T ss_pred EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCC
Confidence 000000 0111111123567777765444332110 0012333 8999999
Q ss_pred CEEEEEEcC---------CCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEeccCCCccccccccccccc
Q 019290 213 SFLLLAESA---------TLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEE 282 (343)
Q Consensus 213 ~~lyv~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~ 282 (343)
+.+|++... .+.|.++|...... ...+ .....|.++.+++||+ +|++.+..
T Consensus 331 ~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv---v~~I-~vg~~P~gia~spDg~~~lyv~n~~--------------- 391 (426)
T 3c75_H 331 DRIYLLVDQRDEWKHKAASRFVVVLNAETGER---INKI-ELGHEIDSINVSQDAEPLLYALSAG--------------- 391 (426)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCE---EEEE-EEEEEECEEEECCSSSCEEEEEETT---------------
T ss_pred CEEEEEecccccccccCCCCEEEEEECCCCeE---EEEE-ECCCCcCeEEEccCCCEEEEEEcCC---------------
Confidence 999998642 35799999875322 1122 2334599999999998 66665531
Q ss_pred cCCCcccCCCeEEEECC-CCCEEEEe
Q 019290 283 TAKPWFLRDPVGVKFDV-NGNVVDVL 307 (343)
Q Consensus 283 ~~~~~~~~~~~v~~~d~-~g~~~~~~ 307 (343)
.+.|..||. .++++..+
T Consensus 392 --------s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 392 --------TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp --------TTEEEEEETTTCCEEEEE
T ss_pred --------CCeEEEEECCCCCEEEEe
Confidence 358889997 57777665
No 110
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.17 E-value=7.2e-09 Score=87.70 Aligned_cols=165 Identities=16% Similarity=0.156 Sum_probs=116.8
Q ss_pred ccccccccCCCCCCCceEEEcCCCCeeEE-EecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeee
Q 019290 23 SKSYQQLQLPGVVGPESLAFDCNGEGPYV-GVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLG 100 (343)
Q Consensus 23 ~~~~~~~~~~~~~~p~~l~~d~~g~~l~~-~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (343)
-+.++++.+|.-..+++++.+ ++.+|. ...++.++.||+++.+.. .|.. ...+.|
T Consensus 53 gkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~---------------------~~~Gwg 109 (243)
T 3mbr_X 53 GRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRY---------------------PGEGWA 109 (243)
T ss_dssp CCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEEC---------------------SSCCCE
T ss_pred CCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeC---------------------CCCceE
Confidence 556778888865566788876 455774 456889999999875432 3321 123456
Q ss_pred EEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEcccc-cCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCC
Q 019290 101 IKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASS-AGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 101 i~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~-~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
++.+ ++.||+++..+.|+.+|+++.++..-... ..+.+...+|.+.... |++|+....
T Consensus 110 lt~d--g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~--G~lyanvw~----------------- 168 (243)
T 3mbr_X 110 LTSD--DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVN--GELLANVWL----------------- 168 (243)
T ss_dssp EEEC--SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET--TEEEEEETT-----------------
T ss_pred EeeC--CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeC--CEEEEEECC-----------------
Confidence 6644 68999998656699999998766543322 2334455678877663 899987654
Q ss_pred CceEEEEeCCCCceEEeec--------------CCCCcceeEEecCCCEEEEEEcCCCeEEEEEcc
Q 019290 180 SGRLLKYDPLKKNVTVMYN--------------GLSFPNGVALSNNNSFLLLAESATLKILRFWLQ 231 (343)
Q Consensus 180 ~~~v~~~d~~~~~~~~~~~--------------~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~ 231 (343)
...|.++|++++++..... ....+||||++++++.||++.-....++.+.+.
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 5689999999998754321 123579999999999999999888999888764
No 111
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.17 E-value=1.3e-08 Score=90.26 Aligned_cols=217 Identities=12% Similarity=0.046 Sum_probs=130.6
Q ss_pred CCceEEEcCCCCeeEEEe------------cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE
Q 019290 36 GPESLAFDCNGEGPYVGV------------SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF 103 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~------------~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (343)
.|.+++++++|+.+|++. .++.|+.+|..+++...... ....+.++++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~--------------------~~~~~~~~~~ 142 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--------------------APRQITMLAW 142 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE--------------------CCSSCCCEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe--------------------CCCCcceeEE
Confidence 689999999998788764 46899999998765432211 1224678899
Q ss_pred eCCCCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeec------
Q 019290 104 NPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATG------ 177 (343)
Q Consensus 104 ~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~------ 177 (343)
+++++.||++ ...++.+|.++++......... ....+++.+++..+|++......-...+.......
T Consensus 143 s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (337)
T 1pby_B 143 ARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQS-----WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT 215 (337)
T ss_dssp CTTSSCEEEE--SSSEEEEETTTTEEEEEECSTT-----TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGG
T ss_pred CCCCCEEEEe--CCeEEEEECCCCcEeeeeeccc-----cCCCceeCCCccEEeeeccCCCceeeeeecccccccccccc
Confidence 9855568888 3569999999887654322211 01122445521235554322100000000000000
Q ss_pred CCCceEEEEeCCCCceEEe--ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeC
Q 019290 178 DRSGRLLKYDPLKKNVTVM--YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSD 255 (343)
Q Consensus 178 ~~~~~v~~~d~~~~~~~~~--~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 255 (343)
.....|+.+|..+++...+ ......+.++++++|++.+|++ .+.|++|++.+... ...+ .....|.+++++
T Consensus 216 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~---~~~~-~~~~~~~~~~~s 288 (337)
T 1pby_B 216 AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNAS---IKRV-PLPHSYYSVNVS 288 (337)
T ss_dssp GEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEE---EEEE-ECSSCCCEEEEC
T ss_pred ccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcC---ccee-cCCCceeeEEEC
Confidence 0011588999988776422 1223457789999999999988 47999999865221 1122 233458889999
Q ss_pred CCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCC
Q 019290 256 SKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNE 311 (343)
Q Consensus 256 ~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~ 311 (343)
++|+ +|++. . .+.|..+|. .++.+..+..+.
T Consensus 289 ~dg~~l~~~~-~------------------------~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 289 TDGSTVWLGG-A------------------------LGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp TTSCEEEEES-B------------------------SSEEEEEETTTCCEEEEEECGG
T ss_pred CCCCEEEEEc-C------------------------CCcEEEEECcCCcEEEEEEcCC
Confidence 9996 66653 3 247888887 577777776543
No 112
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.16 E-value=2.4e-08 Score=92.26 Aligned_cols=207 Identities=14% Similarity=0.083 Sum_probs=134.4
Q ss_pred CCceEEEcCCCCeeEEEecC---CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 36 GPESLAFDCNGEGPYVGVSD---GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~---g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
...++++.|+|+.+.+...+ ..|+.+|..+++...+.. ....+..+++++++..|++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~--------------------~~~~~~~~~~spdg~~la~ 239 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS--------------------FPRHNGAPAFSPDGSKLAF 239 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC--------------------CSSCEEEEEECTTSSEEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec--------------------CCCcccCEEEcCCCCEEEE
Confidence 45688999999966655544 489999998877655431 1124567899984445665
Q ss_pred EeCC---CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 113 ADAY---FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 113 ~~~~---~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
+... ..|+.+|.++++.+.+.... ..+..+++.+ ||+ |+++... .+...|+.+|.
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~~~l~~~~-----~~~~~~~~sp-dg~~l~~~s~~---------------~g~~~i~~~d~ 298 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQIRQVTDGR-----SNNTEPTWFP-DSQNLAFTSDQ---------------AGRPQVYKVNI 298 (415)
T ss_dssp EECTTSSCEEEEEETTTCCEEECCCCS-----SCEEEEEECT-TSSEEEEEECT---------------TSSCEEEEEET
T ss_pred EEecCCCceEEEEECCCCCEEeCcCCC-----CcccceEECC-CCCEEEEEECC---------------CCCcEEEEEEC
Confidence 5333 24999999988876553211 2466788999 576 5554321 11347999999
Q ss_pred CCCceEEeecCCCCcceeEEecCCCEEEEEEcC--CCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEE-EEec
Q 019290 189 LKKNVTVMYNGLSFPNGVALSNNNSFLLLAESA--TLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFW-IAMN 265 (343)
Q Consensus 189 ~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lw-i~~~ 265 (343)
.+++...+.........++++|||+.|+++... ...|+++++.+ ++...+.... ....++++++|+.. .+..
T Consensus 299 ~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~----~~~~~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 299 NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT----GGVQVLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT----CCEEECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred CCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC----CCEEEecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 888766654444456678999999988887654 35899999876 3323332222 35567889999744 4443
Q ss_pred cCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCC
Q 019290 266 SARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGN 310 (343)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~ 310 (343)
. +.. ..|+.+|.+++....+...
T Consensus 374 ~-~~~---------------------~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 374 Q-GMG---------------------SVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp E-TTE---------------------EEEEEEETTSCCEEECCCS
T ss_pred C-CCc---------------------cEEEEEECCCCcEEEeeCC
Confidence 3 211 2688888887776666543
No 113
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.16 E-value=5.6e-08 Score=93.11 Aligned_cols=230 Identities=15% Similarity=0.122 Sum_probs=145.3
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
.+.++++.++|+.+.++..++.+..|+.++.....+. .....+.++++++++..|..+..
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~--------------------~~~~~v~~~~~s~dg~~l~~~~~ 405 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT--------------------GHSSSVRGVAFSPDGQTIASASD 405 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEE--------------------CCSSCEEEEEECTTSSCEEEEET
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEec--------------------CCCCCeEEEEECCCCCEEEEEeC
Confidence 4568999999998888889999999997654333332 12234678999984445555544
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...|..+|......+.+. .. ...+..+++.+ |+.+.++... .+.|..+|..+.....
T Consensus 406 d~~v~~~~~~~~~~~~~~-~~----~~~v~~~~~s~-d~~~l~~~~~-----------------d~~v~~w~~~~~~~~~ 462 (577)
T 2ymu_A 406 DKTVKLWNRNGQLLQTLT-GH----SSSVWGVAFSP-DDQTIASASD-----------------DKTVKLWNRNGQLLQT 462 (577)
T ss_dssp TSEEEEECTTCCEEEEEE-CC----SSCEEEEEECT-TSSEEEEEET-----------------TSEEEEEETTSCEEEE
T ss_pred CCEEEEEeCCCCEEEEec-CC----CCCeEEEEECC-CCCEEEEEcC-----------------CCEEEEEECCCCEEEE
Confidence 444888887644443332 11 13467899999 5776664432 4567788876555555
Q ss_pred eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcccccc
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNK 275 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~ 275 (343)
+.........++++|+++.|.. ...++.|..|+..+. ..+.+.........++++++|++.++...
T Consensus 463 ~~~~~~~v~~~~~spd~~~las-~~~d~~i~iw~~~~~----~~~~~~~h~~~v~~l~~s~dg~~l~s~~~--------- 528 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIAS-ASDDKTVKLWNRNGQ----LLQTLTGHSSSVRGVAFSPDGQTIASASD--------- 528 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEE-EETTSEEEEEETTSC----EEEEEECCSSCEEEEEECTTSSCEEEEET---------
T ss_pred EcCCCCCEEEEEEcCCCCEEEE-EeCCCEEEEEcCCCC----EEEEEeCCCCCEEEEEEcCCCCEEEEEEC---------
Confidence 5555556788999999986554 456789999996552 22233222222456788999987776554
Q ss_pred ccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEE
Q 019290 276 KTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVI 341 (343)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~ 341 (343)
.+.|..+|.+++.+..+.... ..+..+... +|+..++......|.+.
T Consensus 529 ---------------dg~v~lwd~~~~~~~~~~~h~----~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 529 ---------------DKTVKLWNRNGQLLQTLTGHS----SSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp ---------------TSEEEEECTTSCEEEEEECCS----SCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred ---------------cCEEEEEeCCCCEEEEEcCCC----CCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 346777888888877765432 345555444 55555554444445543
No 114
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.14 E-value=9.9e-08 Score=84.32 Aligned_cols=190 Identities=14% Similarity=0.124 Sum_probs=117.2
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
...++++.++|+.+.++. ++.|..|+..++... .+... ........+..+++++++..|+++.
T Consensus 53 ~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~---------------~~~~~~~~v~~~~~~~~~~~l~~~~ 116 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL---------------DCLNRDNYIRSCKLLPDGCTLIVGG 116 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEE---------------ECSCTTSBEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecc---------------cccCCCCcEEEEEEcCCCCEEEEEc
Confidence 578999999999777776 899999998764311 11000 0001223467899998444566665
Q ss_pred CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 115 AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
....|..+|.++++......... ....+..+++.+ ++...++... .+.|..+|..+++..
T Consensus 117 ~d~~i~~~d~~~~~~~~~~~~~~--~~~~i~~~~~~~-~~~~l~~~~~-----------------dg~v~~~d~~~~~~~ 176 (337)
T 1gxr_A 117 EASTLSIWDLAAPTPRIKAELTS--SAPACYALAISP-DSKVCFSCCS-----------------DGNIAVWDLHNQTLV 176 (337)
T ss_dssp SSSEEEEEECCCC--EEEEEEEC--SSSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEETTTTEEE
T ss_pred CCCcEEEEECCCCCcceeeeccc--CCCceEEEEECC-CCCEEEEEeC-----------------CCcEEEEeCCCCcee
Confidence 44459999998776332211111 113467889998 4665553322 457888998776654
Q ss_pred Eee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 195 VMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 195 ~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
... ........++++++++.++.+ ..++.|..|++..... ...+ ........++++++|++.++...
T Consensus 177 ~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~---~~~~-~~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 177 RQFQGHTDGASCIDISNDGTKLWTG-GLDNTVRSWDLREGRQ---LQQH-DFTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEE---EEEE-ECSSCEEEEEECTTSSEEEEEET
T ss_pred eeeecccCceEEEEECCCCCEEEEE-ecCCcEEEEECCCCce---Eeee-cCCCceEEEEECCCCCEEEEEcC
Confidence 333 334557889999999876655 4678999999875322 1111 22333456778888877666554
No 115
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.14 E-value=1.8e-07 Score=82.33 Aligned_cols=238 Identities=12% Similarity=0.079 Sum_probs=144.1
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..|+..+++...... .....+..++++++++.|..+..
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~-------------------~h~~~v~~~~~~~~~~~l~s~~~ 85 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-------------------GHKLGISDVAWSSDSNLLVSASD 85 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-------------------CCSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc-------------------cCCCceEEEEEcCCCCEEEEECC
Confidence 46789999999988888899999999987765443221 12234678999984445555544
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...|..+|.++++........ ...+..+++.+ ++.+.++... .+.|..+|..+++...
T Consensus 86 d~~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~-~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 86 DKTLKIWDVSSGKCLKTLKGH----SNYVFCCNFNP-QSNLIVSGSF-----------------DESVRIWDVKTGKCLK 143 (312)
T ss_dssp TSEEEEEETTTCCEEEEEECC----SSCEEEEEECS-SSSEEEEEET-----------------TSCEEEEETTTCCEEE
T ss_pred CCEEEEEECCCCcEEEEEcCC----CCCEEEEEEcC-CCCEEEEEeC-----------------CCcEEEEECCCCEEEE
Confidence 344889999887654332221 13467888998 4776664432 4568888987666433
Q ss_pred -eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEeccCCCcccc
Q 019290 196 -MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAMNSARGKIES 273 (343)
Q Consensus 196 -~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~~~~~~~~~~ 273 (343)
+.........++++++++.++.+ ..++.|..|++..... ...+.. .......++++++|+..++...
T Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------- 212 (312)
T 4ery_A 144 TLPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQC---LKTLIDDDNPPVSFVKFSPNGKYILAATL------- 212 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCE---EEEECCSSCCCEEEEEECTTSSEEEEEET-------
T ss_pred EecCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCce---eeEEeccCCCceEEEEECCCCCEEEEEcC-------
Confidence 33333456788999998866544 5678999999865221 112211 1111234678999987776554
Q ss_pred ccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 274 NKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|..+|. +++....+.................++.+.+++.....|.+++
T Consensus 213 -----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd 265 (312)
T 4ery_A 213 -----------------DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 265 (312)
T ss_dssp -----------------TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEE
T ss_pred -----------------CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEE
Confidence 346667776 4555555543322111111222223455555555555666654
No 116
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.13 E-value=2e-07 Score=84.87 Aligned_cols=254 Identities=11% Similarity=0.032 Sum_probs=142.0
Q ss_pred ccccccCCCCCCCceEEEcCCCCeeEEEe----------cCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCC
Q 019290 25 SYQQLQLPGVVGPESLAFDCNGEGPYVGV----------SDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEP 93 (343)
Q Consensus 25 ~~~~~~~~~~~~p~~l~~d~~g~~l~~~~----------~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 93 (343)
.+.+++.+ ..| ++++++||+.+|+.. .++.|..||..+.+.. .+.... .....
T Consensus 59 ~~~~i~~g--~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~-------------~~~~~ 122 (373)
T 2mad_H 59 ILGHVNGG--FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD-------------APRFD 122 (373)
T ss_pred EEEEecCC--CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC-------------ccccc
Confidence 34444443 368 999999999899774 2467889998775433 221100 00001
Q ss_pred CcCCeeeEEEeCCCCeEEEEeCC--CeEEEEeCCCCeEEEc-ccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccc
Q 019290 94 LCGRPLGIKFNPVTCDLYIADAY--FGLMVVGPNGGQAQQL-ASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQY 170 (343)
Q Consensus 94 ~~~~p~gi~~~~~~~~l~v~~~~--~gi~~~d~~~~~~~~~-~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~ 170 (343)
....|.+++++++++.||+++.. +.|..+| +++++... ... +..+.+.+...+.|++...
T Consensus 123 ~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~--------~~~~~~~~~~~~~~~~~~~-------- 185 (373)
T 2mad_H 123 VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS--------PTCYHIHPGAPSTFYLLCA-------- 185 (373)
T ss_pred cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--------CceEEEEeCCCceEEEEcC--------
Confidence 12357899999977789999743 4599999 98876533 221 1123333322456665543
Q ss_pred eeeeeecCCCceEEEEeCCCCceEEeec-----CCCCc--ceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee
Q 019290 171 FMSIATGDRSGRLLKYDPLKKNVTVMYN-----GLSFP--NGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA 243 (343)
Q Consensus 171 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~-----~~~~~--~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (343)
.+.+..+|. +++...... ....+ ....+.++++.+|+.. ..+.+++++..+... .....+.
T Consensus 186 ---------dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~-~v~~~~~ 253 (373)
T 2mad_H 186 ---------QGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGA-TNKAPID 253 (373)
T ss_pred ---------CCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcc-eEeeeee
Confidence 456777777 555431110 00111 2234455666666665 467899999865321 1011110
Q ss_pred -------cCCCCCCc---eeeCCCC-CEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CCEEEEeeCCC
Q 019290 244 -------EMPRFPDN---IKSDSKG-EFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGNE 311 (343)
Q Consensus 244 -------~~~~~p~~---i~~d~~G-~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~ 311 (343)
.....|.+ +.++++| ++|++... +... +-....+.|..+|.+ ++.+..+..+.
T Consensus 254 ~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~-~~~~--------------~~~~~~~~V~VID~~t~~vv~~i~~g~ 318 (373)
T 2mad_H 254 ALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSE-QSAW--------------KLHAAAKEVTSVTGLVGQTSSQISLGH 318 (373)
T ss_pred ecCCcccccceecCceEeEEECCCCCEEEEEecc-CCcc--------------cccCCCCeEEEEECCCCEEEEEEECCC
Confidence 01113566 7788886 78998653 1000 000002478899985 66667775432
Q ss_pred CCccCCceeEE--EeCC-EEEEecCCCCeEEEEcC
Q 019290 312 GNTLNSVSEVQ--EYGE-YLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 312 ~~~~~~~~~~~--~~~g-~l~i~~~~~~~i~~~~~ 343 (343)
.+..+. .++. .+|+++..++.|.+||.
T Consensus 319 -----~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 319 -----DVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred -----CcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 122322 2344 57777778999999974
No 117
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.13 E-value=1.2e-08 Score=90.89 Aligned_cols=165 Identities=14% Similarity=0.040 Sum_probs=99.0
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCC-
Q 019290 39 SLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYF- 117 (343)
Q Consensus 39 ~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~- 117 (343)
++++.+++.++.+...++.|+.+|..+++....... .....|.+++++++++.+|++....
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~------------------~~~~~~~~~~~s~dg~~~~v~~~~~~ 65 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM------------------PDKFGPGTAMMAPDNRTAYVLNNHYG 65 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC------------------SSCCSSCEEEECTTSSEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec------------------CCCCCCceeEECCCCCEEEEEeCCCC
Confidence 456677777556777899999999987654322110 1112467899998445688886544
Q ss_pred eEEEEeCCCCeEEEcccccCC--CCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 118 GLMVVGPNGGQAQQLASSAGG--IPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 118 gi~~~d~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
.|+.+|+++++.......... .....+.++++++ ||+ +|++..... .....+ ....+.|+.+|.++++..
T Consensus 66 ~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~--~~~~~~----~~~~~~i~~~d~~~~~~~ 138 (349)
T 1jmx_B 66 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQ--RLNDHY----VVKPPRLEVFSTADGLEA 138 (349)
T ss_dssp EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEE--ECSSCE----EECCCEEEEEEGGGGGGB
T ss_pred cEEEEeCCCCcEEEEEEcccccccccccccceEECC-CCCEEEEEccccc--cccccc----ccCCCeEEEEECCCcccc
Confidence 499999998876543222110 0023478999999 464 666542100 000000 001357899998764321
Q ss_pred ---EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 195 ---VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 195 ---~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
........+.+++++++++ +|+.. +.|+++++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~s~dg~-l~~~~---~~i~~~d~~~ 175 (349)
T 1jmx_B 139 KPVRTFPMPRQVYLMRAADDGS-LYVAG---PDIYKMDVKT 175 (349)
T ss_dssp CCSEEEECCSSCCCEEECTTSC-EEEES---SSEEEECTTT
T ss_pred ceeeeccCCCcccceeECCCCc-EEEcc---CcEEEEeCCC
Confidence 1122223577888999998 88753 3499998764
No 118
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.12 E-value=1.1e-08 Score=87.36 Aligned_cols=163 Identities=19% Similarity=0.245 Sum_probs=114.2
Q ss_pred ccccccccCCCCCCCceEEEcCCCCeeEE-EecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeee
Q 019290 23 SKSYQQLQLPGVVGPESLAFDCNGEGPYV-GVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLG 100 (343)
Q Consensus 23 ~~~~~~~~~~~~~~p~~l~~d~~g~~l~~-~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (343)
-+.++++ ++.-...++++.+. +.+|. ...++.++.||+++.+.. .|.. ...+.|
T Consensus 85 gkv~~~~-l~~~~FgeGit~~g--~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~---------------------~~eGwG 140 (268)
T 3nok_A 85 AQPVWME-RLGNIFAEGLASDG--ERLYQLTWTEGLLFTWSGMPPQRERTTRY---------------------SGEGWG 140 (268)
T ss_dssp SSCSEEE-ECTTCCEEEEEECS--SCEEEEESSSCEEEEEETTTTEEEEEEEC---------------------SSCCCC
T ss_pred CcEEeEE-CCCCcceeEEEEeC--CEEEEEEccCCEEEEEECCcCcEEEEEeC---------------------CCceeE
Confidence 4556667 77544567788864 34774 456789999999875433 3321 123467
Q ss_pred EEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEcccc-cCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCC
Q 019290 101 IKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASS-AGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 101 i~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~-~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
++.+ ++.||+++..+.|+.+|+++.++..-... ..+.+...+|.+.... |++|+....
T Consensus 141 Lt~D--g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~d--G~lyanvw~----------------- 199 (268)
T 3nok_A 141 LCYW--NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECAN--GVIYANIWH----------------- 199 (268)
T ss_dssp EEEE--TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET--TEEEEEETT-----------------
T ss_pred EecC--CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeC--CEEEEEECC-----------------
Confidence 7766 67999998555699999998776543322 2333455678887773 899987654
Q ss_pred CceEEEEeCCCCceEEeec--------------CCCCcceeEEecCCCEEEEEEcCCCeEEEEEc
Q 019290 180 SGRLLKYDPLKKNVTVMYN--------------GLSFPNGVALSNNNSFLLLAESATLKILRFWL 230 (343)
Q Consensus 180 ~~~v~~~d~~~~~~~~~~~--------------~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~ 230 (343)
...|.++|++++++..... ....+||||++++++.||++.-....+|.+.+
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 5689999999998753221 12357999999999999999988888888765
No 119
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.10 E-value=3.8e-08 Score=88.14 Aligned_cols=208 Identities=15% Similarity=0.112 Sum_probs=127.5
Q ss_pred CCcCCeeeEEEeCCCCeEEEEeC-CCeEEEEeCCCCeEEEcccc--cCCCCccCcceeEEeCC---CCeEEEEeCCcccc
Q 019290 93 PLCGRPLGIKFNPVTCDLYIADA-YFGLMVVGPNGGQAQQLASS--AGGIPFRFTNDLDIDPN---TGIVYFTDSSIYFQ 166 (343)
Q Consensus 93 ~~~~~p~gi~~~~~~~~l~v~~~-~~gi~~~d~~~~~~~~~~~~--~~~~~~~~~~~i~~d~~---dg~l~v~~~~~~~~ 166 (343)
.....|.+|++.+ +++|||+.. ...|++++.++++...+... ........+.+|+++|+ ++.||++...
T Consensus 29 ~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~---- 103 (347)
T 3das_A 29 TGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS---- 103 (347)
T ss_dssp CCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC----
T ss_pred cCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec----
Confidence 3455799999999 889999976 34499999877766544221 11122356899999982 3889996432
Q ss_pred cccceeeeeecCCCceEEEEeCCCC--------ceEEeecCC-----CCcceeEEecCCCEEEEEE-------------c
Q 019290 167 RRQYFMSIATGDRSGRLLKYDPLKK--------NVTVMYNGL-----SFPNGVALSNNNSFLLLAE-------------S 220 (343)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~d~~~~--------~~~~~~~~~-----~~~~~i~~~~d~~~lyv~~-------------~ 220 (343)
...++|.|+....+ +.+.+.... -....+++++||. ||++. .
T Consensus 104 -----------~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~ 171 (347)
T 3das_A 104 -----------ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKS 171 (347)
T ss_dssp -----------SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTC
T ss_pred -----------CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCC
Confidence 01457888865431 122222211 1246699999984 99983 2
Q ss_pred CCCeEEEEEccCccc----cccceeeecCCCCCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEE
Q 019290 221 ATLKILRFWLQGERT----TYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVK 296 (343)
Q Consensus 221 ~~~~i~~~~~~~~~~----~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 296 (343)
..++|+|++.++.-. ....++++..-.-|.++++|++|+||++.+.. ... ..|.+
T Consensus 172 ~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~-~~~--------------------deln~ 230 (347)
T 3das_A 172 LGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQ-DTW--------------------DELNA 230 (347)
T ss_dssp STTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCS-SSC--------------------EEEEE
T ss_pred CCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCC-CCC--------------------ceeeE
Confidence 358999999876310 00223444311128899999999999999862 211 12222
Q ss_pred ECCCCC---------------E--EEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 297 FDVNGN---------------V--VDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 297 ~d~~g~---------------~--~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
+.+.+. . +..+. + ....++.+..+.|.+|++.....+|.++.
T Consensus 231 i~~G~nyGwP~~~g~~~~~~~~~P~~~~~-~---~~~ap~G~~~~~g~~~~~~l~~~~l~~v~ 289 (347)
T 3das_A 231 IKPGDNYGWPEAEGKGGGSGFHDPVAQWS-T---DEASPSGIAYAEGSVWMAGLRGERLWRIP 289 (347)
T ss_dssp ECTTCBCCTTTCCSSCCCTTCCCCSEEEC-T---TTCCEEEEEEETTEEEEEESTTCSEEEEE
T ss_pred EcCCCEecCCcccCCCCCccccCCcEecC-C---CCCCCcceEEEcCceeeccccCCEEEEEE
Confidence 221110 0 11111 0 01256677778999999999999998874
No 120
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.10 E-value=6.3e-08 Score=92.97 Aligned_cols=238 Identities=11% Similarity=-0.023 Sum_probs=146.4
Q ss_pred CceEEEcCC-CCeeE-EEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 37 PESLAFDCN-GEGPY-VGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 37 p~~l~~d~~-g~~l~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
|.......| ++.+| +...++.|..+|..+++...-. .....|+++.++++++.+|+++
T Consensus 156 P~~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i--------------------~~g~~p~~v~~SpDGr~lyv~~ 215 (567)
T 1qks_A 156 PTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVL--------------------DTGYAVHISRLSASGRYLFVIG 215 (567)
T ss_dssp CSSCCSCCCGGGEEEEEETTTTEEEEEETTTCCEEEEE--------------------ECSSCEEEEEECTTSCEEEEEE
T ss_pred ccccccccCCCceEEEEeCCCCeEEEEECCCCeEEEEE--------------------eCCCCccceEECCCCCEEEEEc
Confidence 444444333 34455 4556789999999887644221 1223588999999667899997
Q ss_pred CCCeEEEEeCC--CCeEEEcccccCCCCccCcceeEEe----CCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 115 AYFGLMVVGPN--GGQAQQLASSAGGIPFRFTNDLDID----PNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 115 ~~~gi~~~d~~--~~~~~~~~~~~~~~~~~~~~~i~~d----~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
....|..+|+. +++...- ...+ ..+.+++++ +++..+|+++.. .+.|..+|.
T Consensus 216 ~dg~V~viD~~~~t~~~v~~--i~~G---~~P~~ia~s~~~~pDGk~l~v~n~~-----------------~~~v~ViD~ 273 (567)
T 1qks_A 216 RDGKVNMIDLWMKEPTTVAE--IKIG---SEARSIETSKMEGWEDKYAIAGAYW-----------------PPQYVIMDG 273 (567)
T ss_dssp TTSEEEEEETTSSSCCEEEE--EECC---SEEEEEEECCSTTCTTTEEEEEEEE-----------------TTEEEEEET
T ss_pred CCCeEEEEECCCCCCcEeEE--EecC---CCCceeEEccccCCCCCEEEEEEcc-----------------CCeEEEEEC
Confidence 55569999995 5544322 1112 347899999 543468887653 567888898
Q ss_pred CCCceEEeec-C-----------CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCC
Q 019290 189 LKKNVTVMYN-G-----------LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDS 256 (343)
Q Consensus 189 ~~~~~~~~~~-~-----------~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~ 256 (343)
.+.+...... . .....++..++++..++++....+.|+.++...... .....+ ....++.++.+|+
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~-~~v~~i-~~~~~~~d~~~~p 351 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN-LKTTEI-SAERFLHDGGLDG 351 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE-EEEEEE-ECCSSEEEEEECT
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc-ceeeee-eccccccCceECC
Confidence 7766543221 1 113456777888888888888889999999765221 111111 1233577888999
Q ss_pred CCCE-EEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeC-CCCCcc-CCceeEEEeCCEEEEec
Q 019290 257 KGEF-WIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDG-NEGNTL-NSVSEVQEYGEYLYTGS 332 (343)
Q Consensus 257 ~G~l-wi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~-~~~~~~-~~~~~~~~~~g~l~i~~ 332 (343)
+|+. |++.+. .+.|..+|. +++++..+.. ...... .......++.+.+|+++
T Consensus 352 dgr~~~va~~~------------------------sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~ 407 (567)
T 1qks_A 352 SHRYFITAANA------------------------RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATS 407 (567)
T ss_dssp TSCEEEEEEGG------------------------GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEE
T ss_pred CCCEEEEEeCC------------------------CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeC
Confidence 9975 566654 347778987 4666665543 221111 11121222358899876
Q ss_pred C-CCCeEEEEc
Q 019290 333 S-VQPYVVVIK 342 (343)
Q Consensus 333 ~-~~~~i~~~~ 342 (343)
. .++.|.+++
T Consensus 408 ~~g~~~Vsvid 418 (567)
T 1qks_A 408 HMGDDSVALIG 418 (567)
T ss_dssp BSSSSEEEEEE
T ss_pred CCCCCeEEEec
Confidence 4 568898886
No 121
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.09 E-value=1.5e-07 Score=84.64 Aligned_cols=240 Identities=11% Similarity=0.013 Sum_probs=141.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+++++++|+.++++..++.|..||..++++...... ......+..+++++++..|+.+..
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-----------------~~h~~~v~~~~~~~~~~~l~~~~~ 72 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL-----------------KEHNGQVTGVDWAPDSNRIVTCGT 72 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE-----------------ECCSSCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeee-----------------cCCCCcccEEEEeCCCCEEEEEcC
Confidence 578999999999888888899999999887643222110 112235678999984445666643
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc---
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN--- 192 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--- 192 (343)
...|..+|.++++......... ....+..+++.+ ++.++++... .+.|..+|...+.
T Consensus 73 dg~i~vwd~~~~~~~~~~~~~~--~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~v~i~d~~~~~~~~ 132 (372)
T 1k8k_C 73 DRNAYVWTLKGRTWKPTLVILR--INRAARCVRWAP-NEKKFAVGSG-----------------SRVISICYFEQENDWW 132 (372)
T ss_dssp TSCEEEEEEETTEEEEEEECCC--CSSCEEEEEECT-TSSEEEEEET-----------------TSSEEEEEEETTTTEE
T ss_pred CCeEEEEECCCCeeeeeEEeec--CCCceeEEEECC-CCCEEEEEeC-----------------CCEEEEEEecCCCcce
Confidence 3448889988776443322111 124578899998 4765554322 3445555554443
Q ss_pred -eEEeec-CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccc--------------ccc-ceeeecCCCCCCceeeC
Q 019290 193 -VTVMYN-GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERT--------------TYT-PQLFAEMPRFPDNIKSD 255 (343)
Q Consensus 193 -~~~~~~-~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~--------------~~~-~~~~~~~~~~p~~i~~d 255 (343)
...+.. .......+++++++..++.+ ..++.|..|++..... ... ...+....+....++++
T Consensus 133 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 211 (372)
T 1k8k_C 133 VCKHIKKPIRSTVLSLDWHPNSVLLAAG-SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS 211 (372)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEE-ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC
T ss_pred eeeeeecccCCCeeEEEEcCCCCEEEEE-cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC
Confidence 222222 23457889999998866554 4678999999642100 011 11111112224457788
Q ss_pred CCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecC
Q 019290 256 SKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSS 333 (343)
Q Consensus 256 ~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~ 333 (343)
++|++.++... .+.|..+|. +++.+..+..... .+..+... ++++++++
T Consensus 212 ~~~~~l~~~~~------------------------d~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~- 262 (372)
T 1k8k_C 212 ANGSRVAWVSH------------------------DSTVCLADADKKMAVATLASETL----PLLAVTFITESSLVAAG- 262 (372)
T ss_dssp SSSSEEEEEET------------------------TTEEEEEEGGGTTEEEEEECSSC----CEEEEEEEETTEEEEEE-
T ss_pred CCCCEEEEEeC------------------------CCEEEEEECCCCceeEEEccCCC----CeEEEEEecCCCEEEEE-
Confidence 99876666554 346777886 5777666654322 34444333 66766655
Q ss_pred CCCeEEEEc
Q 019290 334 VQPYVVVIK 342 (343)
Q Consensus 334 ~~~~i~~~~ 342 (343)
..+.|.+++
T Consensus 263 ~d~~i~i~~ 271 (372)
T 1k8k_C 263 HDCFPVLFT 271 (372)
T ss_dssp TTSSCEEEE
T ss_pred eCCeEEEEE
Confidence 555665554
No 122
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.09 E-value=1.6e-07 Score=89.97 Aligned_cols=201 Identities=15% Similarity=0.153 Sum_probs=128.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.+++..+.++..++.|..||.++.....+. .....+..+++++++..|..+..
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~--------------------~~~~~v~~~~~s~~g~~l~~~~~ 364 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLT--------------------GHSSSVWGVAFSPDGQTIASASD 364 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEEC--------------------CCSSCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEe--------------------CCCCCEEEEEECCCCCEEEEEeC
Confidence 4568999999998888888999999998776554432 12234678899984445555543
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...+..++..+.....+. .. ...+..+++.+ +|+..++... .+.|..||........
T Consensus 365 dg~v~~~~~~~~~~~~~~-~~----~~~v~~~~~s~-dg~~l~~~~~-----------------d~~v~~~~~~~~~~~~ 421 (577)
T 2ymu_A 365 DKTVKLWNRNGQLLQTLT-GH----SSSVRGVAFSP-DGQTIASASD-----------------DKTVKLWNRNGQLLQT 421 (577)
T ss_dssp TSEEEEEETTCCEEEEEE-CC----SSCEEEEEECT-TSSCEEEEET-----------------TSEEEEECTTCCEEEE
T ss_pred CCEEEEEcCCCCEEEEec-CC----CCCeEEEEECC-CCCEEEEEeC-----------------CCEEEEEeCCCCEEEE
Confidence 334778887644443331 11 13478899999 5776654332 4567788865444444
Q ss_pred eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcccccc
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNK 275 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~ 275 (343)
+........+++++|+++.+..+ ..++.|..|+..+. ....+.........++++++|++.++...
T Consensus 422 ~~~~~~~v~~~~~s~d~~~l~~~-~~d~~v~~w~~~~~----~~~~~~~~~~~v~~~~~spd~~~las~~~--------- 487 (577)
T 2ymu_A 422 LTGHSSSVWGVAFSPDDQTIASA-SDDKTVKLWNRNGQ----LLQTLTGHSSSVRGVAFSPDGQTIASASD--------- 487 (577)
T ss_dssp EECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSC----EEEEEECCSSCEEEEEECTTSCEEEEEET---------
T ss_pred ecCCCCCeEEEEECCCCCEEEEE-cCCCEEEEEECCCC----EEEEEcCCCCCEEEEEEcCCCCEEEEEeC---------
Confidence 44444556789999999866554 46789999997552 22222222223456788999988777654
Q ss_pred ccccccccCCCcccCCCeEEEECCCCCEEEEee
Q 019290 276 KTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD 308 (343)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~ 308 (343)
.+.|..+|.+++....+.
T Consensus 488 ---------------d~~i~iw~~~~~~~~~~~ 505 (577)
T 2ymu_A 488 ---------------DKTVKLWNRNGQLLQTLT 505 (577)
T ss_dssp ---------------TSEEEEEETTSCEEEEEE
T ss_pred ---------------CCEEEEEcCCCCEEEEEe
Confidence 235666677777666554
No 123
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=3.5e-08 Score=91.10 Aligned_cols=258 Identities=12% Similarity=0.025 Sum_probs=135.8
Q ss_pred CCCCeeEEEecC-----CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC---
Q 019290 44 CNGEGPYVGVSD-----GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA--- 115 (343)
Q Consensus 44 ~~g~~l~~~~~~-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~--- 115 (343)
++++.+|+.... +.|..+|+.+.+...-. +....| +++++++++.||+++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I--------------------~vG~~P-gia~SpDgk~lyVan~~~~ 140 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMT--------------------DGGFLP-HPVAAEDGSFFAQASTVFE 140 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEE--------------------EECSSC-EEEECTTSSCEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEE--------------------ECCCCC-ceEECCCCCEEEEEecccc
Confidence 577778866543 68999999886543211 122357 9999997778999974
Q ss_pred -------CCeEEEEeCCCCeEEEccccc-CCC--CccCcceeEEeCCCCeEEEEeCC--ccccc---ccc--eeeee---
Q 019290 116 -------YFGLMVVGPNGGQAQQLASSA-GGI--PFRFTNDLDIDPNTGIVYFTDSS--IYFQR---RQY--FMSIA--- 175 (343)
Q Consensus 116 -------~~gi~~~d~~~~~~~~~~~~~-~~~--~~~~~~~i~~d~~dg~l~v~~~~--~~~~~---~~~--~~~~~--- 175 (343)
.+.|..+|..+.++..-.... ... ....+.+++++++..++|+++.. +.... ... ...+.
T Consensus 141 ~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g 220 (426)
T 3c75_H 141 RIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD 220 (426)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred ccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC
Confidence 234999999988765433221 100 12468899999943469998742 10000 000 00000
Q ss_pred -------------ecCCCceEEEEeCCCCceEEe----ecCCCCc--ceeEEecCCCEEEEEEcCCCeEEEEEccCccc-
Q 019290 176 -------------TGDRSGRLLKYDPLKKNVTVM----YNGLSFP--NGVALSNNNSFLLLAESATLKILRFWLQGERT- 235 (343)
Q Consensus 176 -------------~~~~~~~v~~~d~~~~~~~~~----~~~~~~~--~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~- 235 (343)
...+.+.+..++..++++... ..-...+ ..+.+.++++.+|+.. ..+.++++|..+...
T Consensus 221 ~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s-~~g~V~ViD~~~~~~~ 299 (426)
T 3c75_H 221 CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT-YTGKIFQADLTAEGAT 299 (426)
T ss_dssp EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB-TTSEEEEEEECSSCEE
T ss_pred ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe-CCCcEEEEeccCCceE
Confidence 001122233333322222110 0000111 2234566777777664 356788888754221
Q ss_pred -cccceeee----cCCCCCCc---eeeCCCC-CEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEE
Q 019290 236 -TYTPQLFA----EMPRFPDN---IKSDSKG-EFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVD 305 (343)
Q Consensus 236 -~~~~~~~~----~~~~~p~~---i~~d~~G-~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~ 305 (343)
........ .....|.+ ++++++| ++|++..+ +..-. + ....+.|..||. .++.+.
T Consensus 300 v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~-~~~gt----------h----k~~s~~VsVID~~T~kvv~ 364 (426)
T 3c75_H 300 FRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQ-RDEWK----------H----KAASRFVVVLNAETGERIN 364 (426)
T ss_dssp ECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEE-CCTTC----------T----TSCEEEEEEEETTTCCEEE
T ss_pred EeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecc-ccccc----------c----cCCCCEEEEEECCCCeEEE
Confidence 00000000 00012334 7888875 68888643 10000 0 000236889997 577777
Q ss_pred EeeCCCCCccCCceeEE--EeCC-EEEEecCCCCeEEEEcC
Q 019290 306 VLDGNEGNTLNSVSEVQ--EYGE-YLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 306 ~~~~~~~~~~~~~~~~~--~~~g-~l~i~~~~~~~i~~~~~ 343 (343)
.+..+. .+..+. .++. .||+++..++.|.+||.
T Consensus 365 ~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 365 KIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp EEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred EEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 775432 133332 2355 68888889999999984
No 124
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.08 E-value=1.4e-07 Score=85.41 Aligned_cols=187 Identities=11% Similarity=0.076 Sum_probs=105.2
Q ss_pred eEEEecC--CEEEEE--EcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeEEEEeC
Q 019290 49 PYVGVSD--GRILKW--KAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGP 124 (343)
Q Consensus 49 l~~~~~~--g~i~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~d~ 124 (343)
+|+++.. ++|+.| |+.++++..+.... ......|.+++++++++.||+++.. .+..++.
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~----------------~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~ 67 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTE----------------IPQDEPISWMTFDHERKNIYGAAMK-KWSSFAV 67 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEE----------------CCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEE
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEc----------------cCCCCCCcEEEECCCCCEEEEEccc-eEEEEEE
Confidence 5666543 466654 56676665543210 0112357789999955568888654 8888887
Q ss_pred C-CCeEEEcccccCCCCccCcceeEEeCCCCeE-EE--EeCCcccccccceeeeeecC----CCceEEEEeCC-CCceEE
Q 019290 125 N-GGQAQQLASSAGGIPFRFTNDLDIDPNTGIV-YF--TDSSIYFQRRQYFMSIATGD----RSGRLLKYDPL-KKNVTV 195 (343)
Q Consensus 125 ~-~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l-~v--~~~~~~~~~~~~~~~~~~~~----~~~~v~~~d~~-~~~~~~ 195 (343)
+ +++...+...... ..+..+++++ ||+. |+ ++... +. ..++ ..+.+..|+.+ .++...
T Consensus 68 ~~~g~~~~~~~~~~~---g~~~~~~~sp-dg~~l~~~~~~~~~-~~--------~~~~~~~~~~g~v~v~~~~~~g~~~~ 134 (365)
T 1jof_A 68 KSPTEIVHEASHPIG---GHPRANDADT-NTRAIFLLAAKQPP-YA--------VYANPFYKFAGYGNVFSVSETGKLEK 134 (365)
T ss_dssp EETTEEEEEEEEECC---SSGGGGCTTS-CCEEEEEEECSSTT-CC--------EEEEEESSSCCEEEEEEECTTCCEEE
T ss_pred CCCCCEEEeeEeecC---CCCccEEECC-CCCEEEEEEecCCc-ce--------eccceeecCCceEEEEccCCCCcCcc
Confidence 6 6766543221111 1266789999 5872 43 22000 00 0000 12334444432 244332
Q ss_pred -ee----cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEcc-Cccccccceeee-cC-CCCCCceeeCCCCC-EEEEecc
Q 019290 196 -MY----NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQ-GERTTYTPQLFA-EM-PRFPDNIKSDSKGE-FWIAMNS 266 (343)
Q Consensus 196 -~~----~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~-~~~~~~~~~~~~-~~-~~~p~~i~~d~~G~-lwi~~~~ 266 (343)
+. .....+.+++++|||+.+|+++...+.|++|+++ +... .....+. .. ...|.+++++++|+ +|++...
T Consensus 135 ~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 135 NVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEECTTSSEEEEEETT
T ss_pred eEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEECCCCCEEEEEECC
Confidence 21 2346789999999999999998777899999987 3211 1111111 11 23478899999995 6666543
No 125
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.07 E-value=4.5e-07 Score=80.59 Aligned_cols=234 Identities=12% Similarity=0.083 Sum_probs=145.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++.+.+++..+.++..++.|..||..+++...... ........+++++++..|..+..
T Consensus 82 ~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~-------------------~~~~~~~~~~~spdg~~l~~g~~ 142 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID-------------------AGPVDAWTLAFSPDSQYLATGTH 142 (321)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-------------------CCTTCCCCEEECTTSSEEEEECT
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEe-------------------CCCccEEEEEECCCCCEEEEEcC
Confidence 46688899999978888899999999987764332211 11123457889984445555533
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...+..++.++++........ ...+..+++.+ +|++.++... .+.|..+|..+++...
T Consensus 143 dg~v~i~~~~~~~~~~~~~~~----~~~v~~~~~sp-dg~~lasg~~-----------------dg~i~iwd~~~~~~~~ 200 (321)
T 3ow8_A 143 VGKVNIFGVESGKKEYSLDTR----GKFILSIAYSP-DGKYLASGAI-----------------DGIINIFDIATGKLLH 200 (321)
T ss_dssp TSEEEEEETTTCSEEEEEECS----SSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEETTTTEEEE
T ss_pred CCcEEEEEcCCCceeEEecCC----CceEEEEEECC-CCCEEEEEcC-----------------CCeEEEEECCCCcEEE
Confidence 344889999877654332211 13477899999 5876664432 4678889988776543
Q ss_pred ee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCccccc
Q 019290 196 MY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESN 274 (343)
Q Consensus 196 ~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~ 274 (343)
.. ........++++|+++.| ++...++.|..|++..... ...+.........+++.++|++.++...
T Consensus 201 ~~~~h~~~v~~l~~spd~~~l-~s~s~dg~i~iwd~~~~~~---~~~~~~h~~~v~~~~~sp~~~~l~s~s~-------- 268 (321)
T 3ow8_A 201 TLEGHAMPIRSLTFSPDSQLL-VTASDDGYIKIYDVQHANL---AGTLSGHASWVLNVAFCPDDTHFVSSSS-------- 268 (321)
T ss_dssp EECCCSSCCCEEEECTTSCEE-EEECTTSCEEEEETTTCCE---EEEECCCSSCEEEEEECTTSSEEEEEET--------
T ss_pred EEcccCCceeEEEEcCCCCEE-EEEcCCCeEEEEECCCcce---eEEEcCCCCceEEEEECCCCCEEEEEeC--------
Confidence 33 333456889999998855 4556688999999865221 1122111222345778999987777655
Q ss_pred cccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 275 KKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|..+|. .++.+..+.... ..+..+... +++..++......|.+++
T Consensus 269 ----------------D~~v~iwd~~~~~~~~~~~~h~----~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 269 ----------------DKSVKVWDVGTRTCVHTFFDHQ----DQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp ----------------TSCEEEEETTTTEEEEEECCCS----SCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred ----------------CCcEEEEeCCCCEEEEEEcCCC----CcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 346667776 455555554322 245555444 555555555566676665
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.05 E-value=1.8e-07 Score=86.45 Aligned_cols=164 Identities=15% Similarity=0.102 Sum_probs=106.2
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCC---eEEEEeCCCCeEEEc
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYF---GLMVVGPNGGQAQQL 132 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~---gi~~~d~~~~~~~~~ 132 (343)
+.|+.+|.+++....+.. ....+..+++++++..|.++.... .|+.+|.++++.+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~--------------------~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHR--------------------SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEE--------------------ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE
T ss_pred ceEEEEcCCCCCCEEEeC--------------------CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEe
Confidence 689999987765555432 112456788998555676665443 699999998887654
Q ss_pred ccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecC
Q 019290 133 ASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNN 211 (343)
Q Consensus 133 ~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d 211 (343)
.... ..+..+++.| ||+ |+++... .....|+.+|..+++...+.........++++||
T Consensus 219 ~~~~-----~~~~~~~~sp-dg~~la~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spd 277 (415)
T 2hqs_A 219 ASFP-----RHNGAPAFSP-DGSKLAFALSK---------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPD 277 (415)
T ss_dssp ECCS-----SCEEEEEECT-TSSEEEEEECT---------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTT
T ss_pred ecCC-----CcccCEEEcC-CCCEEEEEEec---------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCC
Confidence 3211 2467889999 576 5544432 1134699999988887766555455678899999
Q ss_pred CCEEEEEEcCCC--eEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEe
Q 019290 212 NSFLLLAESATL--KILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAM 264 (343)
Q Consensus 212 ~~~lyv~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~ 264 (343)
++.++++....+ .|+++++.+ ++...+.........++++++|+..+..
T Consensus 278 g~~l~~~s~~~g~~~i~~~d~~~----~~~~~l~~~~~~~~~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 278 SQNLAFTSDQAGRPQVYKVNING----GAPQRITWEGSQNQDADVSSDGKFMVMV 328 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTS----SCCEECCCSSSEEEEEEECTTSSEEEEE
T ss_pred CCEEEEEECCCCCcEEEEEECCC----CCEEEEecCCCcccCeEECCCCCEEEEE
Confidence 998887764333 799999876 2222222222223356788999755443
No 127
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.05 E-value=2e-07 Score=84.70 Aligned_cols=257 Identities=12% Similarity=0.037 Sum_probs=138.5
Q ss_pred ccccccccCCCCCCCceEEEcCCCCeeEEEe----------cCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCccc
Q 019290 23 SKSYQQLQLPGVVGPESLAFDCNGEGPYVGV----------SDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTL 91 (343)
Q Consensus 23 ~~~~~~~~~~~~~~p~~l~~d~~g~~l~~~~----------~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 91 (343)
.+.+.++..+. .|+ +++++||+.+|++. .++.|..+|..+.+.. .+..... ..
T Consensus 69 ~~v~~~I~vG~--~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g-------------~r 132 (386)
T 3sjl_D 69 GRVIGMIDGGF--LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA-------------PR 132 (386)
T ss_dssp TEEEEEEEECS--SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC-------------CC
T ss_pred CeEEEEEECCC--CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc-------------cc
Confidence 45566676664 576 99999999898764 2456999999887643 2321000 00
Q ss_pred CCCcCCeeeEEEeCCCCeEEEEeC--CCeEEEEeCCCCeEEEcccccCCCCccCcce----eEEeCCCCeEEEEeCCccc
Q 019290 92 EPLCGRPLGIKFNPVTCDLYIADA--YFGLMVVGPNGGQAQQLASSAGGIPFRFTND----LDIDPNTGIVYFTDSSIYF 165 (343)
Q Consensus 92 ~~~~~~p~gi~~~~~~~~l~v~~~--~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~----i~~d~~dg~l~v~~~~~~~ 165 (343)
......|.++.++++++.+|+++. .+.|..+|.+++++..-...... ....+.+ +++.+ ||++.+.+...
T Consensus 133 ~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~~~~~~~-DG~~~~v~~~~-- 208 (386)
T 3sjl_D 133 FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTFFMHCR-DGSLAKVAFGT-- 208 (386)
T ss_dssp CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEET-TSCEEEEECCS--
T ss_pred cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceeecCCCceeEEECC-CCCEEEEECCC--
Confidence 112236889999997778999975 35699999999887644322110 0011111 13334 34433332210
Q ss_pred ccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCc--ceeEEe-cCCCEEEEEEcCCCeEEEEEccCccc--cccce
Q 019290 166 QRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFP--NGVALS-NNNSFLLLAESATLKILRFWLQGERT--TYTPQ 240 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~--~~i~~~-~d~~~lyv~~~~~~~i~~~~~~~~~~--~~~~~ 240 (343)
.+.+..-. + ........+ +..++. ++|+.+|++ .++.|+.+|..+... .....
T Consensus 209 --------------~g~v~~~~--~----~~~~~~~~~~~~~~~~~~~dG~~~~vs--~~g~V~v~d~~~~~~~v~~~~~ 266 (386)
T 3sjl_D 209 --------------EGTPEITH--T----EVFHPEDEFLINHPAYSQKAGRLVWPT--YTGKIHQIDLSSGDAKFLPAVE 266 (386)
T ss_dssp --------------SSCCEEEE--C----CCCSCTTSCBCSCCEEETTTTEEEEEB--TTSEEEEEECTTSSCEECCCEE
T ss_pred --------------CCeEEEee--c----ceeccccccccccceeEcCCCcEEEEe--CCCEEEEEECCCCcceeeccee
Confidence 11221000 0 011000111 223454 566545544 368999999875321 01111
Q ss_pred eeec---CCC-CCCc---eeeCCCC-CEEEEeccCCCccccccccccccccCCCcc--cCCCeEEEECC-CCCEEEEeeC
Q 019290 241 LFAE---MPR-FPDN---IKSDSKG-EFWIAMNSARGKIESNKKTAFCEETAKPWF--LRDPVGVKFDV-NGNVVDVLDG 309 (343)
Q Consensus 241 ~~~~---~~~-~p~~---i~~d~~G-~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~d~-~g~~~~~~~~ 309 (343)
++.. ..+ .|.+ +++++++ ++|++.+.... |. .+.+.|..+|. .++++..+..
T Consensus 267 ~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~-----------------~~hk~~~~~V~viD~~t~kv~~~i~v 329 (386)
T 3sjl_D 267 ALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE-----------------WRHKTASRFVVVLDAKTGERLAKFEM 329 (386)
T ss_dssp SSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT-----------------TCTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred ccccccccccccCCCcceeeECCCCCeEEEEeccccc-----------------cccCCCCCEEEEEECCCCeEEEEEEC
Confidence 1111 011 2333 6778765 78998753110 00 01247899997 5777777765
Q ss_pred CCCCccCCceeEEEe-CC--EEEEecCCCCeEEEEcC
Q 019290 310 NEGNTLNSVSEVQEY-GE--YLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 310 ~~~~~~~~~~~~~~~-~g--~l~i~~~~~~~i~~~~~ 343 (343)
+. .+..+..+ ++ .||+++..++.|.+||+
T Consensus 330 g~-----~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 330 GH-----EIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp EE-----EECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred CC-----CcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 32 23233332 33 68888988999999974
No 128
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.04 E-value=2.2e-08 Score=90.52 Aligned_cols=213 Identities=10% Similarity=0.138 Sum_probs=112.7
Q ss_pred CCceEEEcCC---CCeeEEEe-c-------CCEEEEEEcCCC--CeE---EeeecCCCccccccCCCCCcccCCCcCCee
Q 019290 36 GPESLAFDCN---GEGPYVGV-S-------DGRILKWKAANS--GWT---EFATTAPHRAREICDGSTNTTLEPLCGRPL 99 (343)
Q Consensus 36 ~p~~l~~d~~---g~~l~~~~-~-------~g~i~~~d~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 99 (343)
.|.+|+++++ +..+|+.. . ..+|.+++.+.. .+. .+..... ......-.+.
T Consensus 67 g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p-------------~~~~~~h~~~ 133 (353)
T 2g8s_A 67 GLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMP-------------KLSTGNHFGG 133 (353)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSS-------------CCBSSSCCCC
T ss_pred CceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECC-------------CCCCCcccCc
Confidence 5789999995 44467553 2 357998876532 222 1211000 0001112356
Q ss_pred eEEEeCCCCeEEEEeCC--------------CeEEEEeCCCCeEEE---ccc------ccCCCCccCcceeEEeCCCCeE
Q 019290 100 GIKFNPVTCDLYIADAY--------------FGLMVVGPNGGQAQQ---LAS------SAGGIPFRFTNDLDIDPNTGIV 156 (343)
Q Consensus 100 gi~~~~~~~~l~v~~~~--------------~gi~~~d~~~~~~~~---~~~------~~~~~~~~~~~~i~~d~~dg~l 156 (343)
+|++++ ++.||++... ..|+++++++. +.. +.. ..-...+..+.++++|+.+|+|
T Consensus 134 ~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~-~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l 211 (353)
T 2g8s_A 134 RLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE-IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNAL 211 (353)
T ss_dssp CEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC-CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEE
T ss_pred cEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC-CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCE
Confidence 899999 8899999532 24999998743 100 000 0000123458899999944999
Q ss_pred EEEeCCcccccccceeeeeecCCCc--eEE---EEeC----------CCCce--EEeecCCCCcceeEEecC------CC
Q 019290 157 YFTDSSIYFQRRQYFMSIATGDRSG--RLL---KYDP----------LKKNV--TVMYNGLSFPNGVALSNN------NS 213 (343)
Q Consensus 157 ~v~~~~~~~~~~~~~~~~~~~~~~~--~v~---~~d~----------~~~~~--~~~~~~~~~~~~i~~~~d------~~ 213 (343)
|+++..... .+....+..+...+ ... .|+. ..+-. .........+.++++... ..
T Consensus 212 ~~~d~g~~~--~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g 289 (353)
T 2g8s_A 212 WLNEHGPRG--GDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQ 289 (353)
T ss_dssp EEEEECSBS--CEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTT
T ss_pred EEEecCCCC--CcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCC
Confidence 999865210 00000000000000 000 0000 00000 001112235788888742 24
Q ss_pred EEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEec
Q 019290 214 FLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMN 265 (343)
Q Consensus 214 ~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~ 265 (343)
.+|+++...++|+++++++.........+....+.|.++++++||.||+++.
T Consensus 290 ~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 290 KLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred cEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 6899999999999999875322112112222334688999999999999864
No 129
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.03 E-value=1.5e-07 Score=86.33 Aligned_cols=229 Identities=9% Similarity=0.055 Sum_probs=130.7
Q ss_pred ccccccccCC-CCCCCceEEE-----------c--CCCCeeEE-EecCCEEEEEEcCCC--CeEEeeecCCCccccccCC
Q 019290 23 SKSYQQLQLP-GVVGPESLAF-----------D--CNGEGPYV-GVSDGRILKWKAANS--GWTEFATTAPHRAREICDG 85 (343)
Q Consensus 23 ~~~~~~~~~~-~~~~p~~l~~-----------d--~~g~~l~~-~~~~g~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~ 85 (343)
.+.+.++++| ....++..-+ . .+++.+|+ +...++|+.+|..+. +.+.+..... +
T Consensus 58 ~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~------~-- 129 (462)
T 2ece_A 58 SKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEP------E-- 129 (462)
T ss_dssp TSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECH------H--
T ss_pred ceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeech------h--
Confidence 5566777888 3334555544 5 67787775 456789999997542 2222211000 0
Q ss_pred CCCccc-CCCcCCeeeEEEeCCCCeEEEEeCCC-------eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEE
Q 019290 86 STNTTL-EPLCGRPLGIKFNPVTCDLYIADAYF-------GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVY 157 (343)
Q Consensus 86 ~~~~~~-~~~~~~p~gi~~~~~~~~l~v~~~~~-------gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~ 157 (343)
+.. ......|+++...+ ++ +||+..++ ++..+|.++.++..-.... ..+.....++.+.+..+.++
T Consensus 130 ---~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~-~~~~~~~Yd~~~~p~~~~mv 203 (462)
T 2ece_A 130 ---EVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID-RGDQYLAYDFWWNLPNEVLV 203 (462)
T ss_dssp ---HHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB-CTTCCCCCCEEEETTTTEEE
T ss_pred ---hcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC-CCCccccceEEECCCCCEEE
Confidence 000 01123689999998 67 99875443 6999999988876543322 12234566888888434455
Q ss_pred EEeCCccccc-ccceeeeeecCCCceEEEEeCCCCceEEeecC---CCCcceeEE--ecCCCEEEEEEc-----CCCeEE
Q 019290 158 FTDSSIYFQR-RQYFMSIATGDRSGRLLKYDPLKKNVTVMYNG---LSFPNGVAL--SNNNSFLLLAES-----ATLKIL 226 (343)
Q Consensus 158 v~~~~~~~~~-~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~i~~--~~d~~~lyv~~~-----~~~~i~ 226 (343)
.++.+.-..+ ..+.....++....+|..||.++++...-..- ...|..+.+ +|+++++|++.. .++.|+
T Consensus 204 sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~ 283 (462)
T 2ece_A 204 SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIW 283 (462)
T ss_dssp ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEE
T ss_pred EccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEE
Confidence 5442200000 00000000012256799999887654322211 235667766 899999999988 888999
Q ss_pred EEEccCccccccceee--ec------C----------CCCCCceeeCCCCC-EEEEecc
Q 019290 227 RFWLQGERTTYTPQLF--AE------M----------PRFPDNIKSDSKGE-FWIAMNS 266 (343)
Q Consensus 227 ~~~~~~~~~~~~~~~~--~~------~----------~~~p~~i~~d~~G~-lwi~~~~ 266 (343)
+|..++. .....+.+ .. + .+.|.+|.+++||+ ||++++.
T Consensus 284 v~~~d~g-~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg 341 (462)
T 2ece_A 284 LWFYEDG-KWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG 341 (462)
T ss_dssp EEEEETT-EEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT
T ss_pred EEEecCC-ceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC
Confidence 8776642 11111111 00 0 24688899999995 7888776
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.99 E-value=2.2e-07 Score=80.23 Aligned_cols=183 Identities=14% Similarity=0.096 Sum_probs=113.5
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCC-CCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAAN-SGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
.+.+++++++|+.++++ .++.|+.+|..+ ++...+... .....+..+++++++..|+++.
T Consensus 43 ~v~~~~~spdg~~l~~~-~~~~i~~~d~~~~~~~~~~~~~------------------~~~~~~~~~~~spdg~~l~~~~ 103 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLN-SEGLLYRLSLAGDPSPEKVDTG------------------FATICNNDHGISPDGALYAISD 103 (297)
T ss_dssp CCEEEEECTTSSEEEEE-ETTEEEEEESSSCCSCEECCCT------------------TCCCBCSCCEECTTSSEEEEEE
T ss_pred ceEeeEECCCCCEEEEE-cCCeEEEEeCCCCCCceEeccc------------------cccccccceEECCCCCEEEEEE
Confidence 57899999999966655 478999999987 665543210 1112356788998555666664
Q ss_pred C----CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCC
Q 019290 115 A----YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL 189 (343)
Q Consensus 115 ~----~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 189 (343)
. ...|+.++.++++.+.+... ..+..+++.+ ||+ ++++... .....||.++..
T Consensus 104 ~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~sp-dg~~l~~~~~~---------------~~~~~l~~~~~~ 161 (297)
T 2ojh_A 104 KVEFGKSAIYLLPSTGGTPRLMTKN------LPSYWHGWSP-DGKSFTYCGIR---------------DQVFDIYSMDID 161 (297)
T ss_dssp CTTTSSCEEEEEETTCCCCEECCSS------SSEEEEEECT-TSSEEEEEEEE---------------TTEEEEEEEETT
T ss_pred eCCCCcceEEEEECCCCceEEeecC------CCccceEECC-CCCEEEEEECC---------------CCceEEEEEECC
Confidence 2 24599999887776554321 1256778888 465 5543321 112368888887
Q ss_pred CCceEEeecCCCCcceeEEecCCCEEEEEEcCC--CeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEE
Q 019290 190 KKNVTVMYNGLSFPNGVALSNNNSFLLLAESAT--LKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIA 263 (343)
Q Consensus 190 ~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~ 263 (343)
+++...+.........++++++++.++++.... ..||.++..+ .....+.........+.++++|+..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 162 SGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG----SSVERITDSAYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp TCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS----SCEEECCCCSEEEEEEEECTTSSEEEE
T ss_pred CCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC----CCcEEEecCCcccCCeEECCCCCEEEE
Confidence 777766655555678899999999888775433 4555555443 222222221222334678899975443
No 131
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.99 E-value=1.8e-07 Score=82.48 Aligned_cols=197 Identities=12% Similarity=0.172 Sum_probs=126.5
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe---CC-CeEEEEeCCCCeEEE
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD---AY-FGLMVVGPNGGQAQQ 131 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~---~~-~gi~~~d~~~~~~~~ 131 (343)
..|++++.++++...+.. . .+..+.++++.||+++ .. ..|++++.++...+.
T Consensus 88 ~~Iy~i~~dg~~~~~l~~--------------------~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~ 143 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDP--------------------D----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKK 143 (302)
T ss_dssp EEEEEEETTSCCCEEEEC--------------------S----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEE
T ss_pred CeEEEEeCCCCcceEeec--------------------C----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEE
Confidence 579999988876555531 1 1223344478999987 23 349999998766665
Q ss_pred cccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecC
Q 019290 132 LASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNN 211 (343)
Q Consensus 132 ~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d 211 (343)
+..... ..+..+. +.||+++.+ ...|++.+.+++..+++..+ +..+.+.|+
T Consensus 144 lt~~~~-------~~~~~~g--~~iy~t~~g-----------------~~~Iy~~~l~g~~~~~l~~~---~~~~~~~P~ 194 (302)
T 3s25_A 144 IKNHYL-------FTCNTSD--RYFYYNNPK-----------------NGQLYRYDTASQSEALFYDC---NCYKPVVLD 194 (302)
T ss_dssp EESSCC-------CCSEEET--TEEEEECTT-----------------TCCEEEEETTTTEEEEEECS---CEEEEEEEE
T ss_pred EeCCCc-------eEeeEEC--CEEEEEeCC-----------------CceEEEEECCCCCEEEEeCC---Cccceeeec
Confidence 543211 1233443 689998764 45799999887776666432 333456789
Q ss_pred CCEEEEEEcCC-CeEEEEEccCccccccceeeecCCCCCCceeeCCCC-CEEEEeccCCCccccccccccccccCCCccc
Q 019290 212 NSFLLLAESAT-LKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKG-EFWIAMNSARGKIESNKKTAFCEETAKPWFL 289 (343)
Q Consensus 212 ~~~lyv~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (343)
++.||+++... ..|++.++++ ...+++.... . ..++++| .||.+....
T Consensus 195 g~~iy~t~~~~~~~I~~~~ldG----~~~~~Lt~~~-~---~~~~~~g~~Iy~~~~~~---------------------- 244 (302)
T 3s25_A 195 DTNVYYMDVNRDNAIVHVNINN----PNPVVLTEAN-I---EHYNVYGSLIFYQRGGD---------------------- 244 (302)
T ss_dssp TTEEEEEEGGGTTEEEEECSSS----CCCEECSCSC-E---EEEEEETTEEEEEECSS----------------------
T ss_pred CCEEEEEEcCCCcEEEEEECCC----CCeEEEeCCC-c---ceEEECCCEEEEEECCC----------------------
Confidence 99999998643 5899999987 4444443211 1 2356655 566664331
Q ss_pred CCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 290 RDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 290 ~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
...|++++.+|.....+.... +..+...++.||++.....+|.+++
T Consensus 245 -~~~i~~~~~DG~~r~~l~~~~------~~~i~i~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 245 -NPALCVVKNDGTGFKELAKGE------FCNINVTSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp -SCEEEEEETTSCCCEEEEESC------EEEEEECSSEEEEEETTTCCEEEEE
T ss_pred -CcEEEEEECCCCccEEeeCCc------cceEEEeCCEEEEEECCCCeEEEEE
Confidence 237888988886544443211 2245557999999999988898875
No 132
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.99 E-value=3.8e-07 Score=83.01 Aligned_cols=214 Identities=14% Similarity=0.032 Sum_probs=123.9
Q ss_pred ccccccccCCC------CCCCceEEEcCCCCeeEEEec--CCEEEEEEcCCCCeEEe-eecCCCccccccCCCCCcccCC
Q 019290 23 SKSYQQLQLPG------VVGPESLAFDCNGEGPYVGVS--DGRILKWKAANSGWTEF-ATTAPHRAREICDGSTNTTLEP 93 (343)
Q Consensus 23 ~~~~~~~~~~~------~~~p~~l~~d~~g~~l~~~~~--~g~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 93 (343)
.+...++++++ ...|+.+++++||+.+|+... .+.|..+| .+++...- . +
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i--------------------~ 165 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLL--------------------S 165 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEc--------------------C
Confidence 44456666651 246999999999999997753 57899999 87654321 1 1
Q ss_pred CcCCeeeEEEeCCCCeEEEEeCCCe-EEEEeCCCCeEEEcccc--cCCCCccCcceeEEeCCCCeEEEEeCCcccccccc
Q 019290 94 LCGRPLGIKFNPVTCDLYIADAYFG-LMVVGPNGGQAQQLASS--AGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQY 170 (343)
Q Consensus 94 ~~~~p~gi~~~~~~~~l~v~~~~~g-i~~~d~~~~~~~~~~~~--~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~ 170 (343)
.+..+.+.+.+++.|++.+.+| +..+|. +++....... .............+.+.++.+|+...
T Consensus 166 ---~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--------- 232 (373)
T 2mad_H 166 ---SPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY--------- 232 (373)
T ss_pred ---CCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcC---------
Confidence 1112334443556777766555 888888 6665422110 00000011122333332356555442
Q ss_pred eeeeeecCCCceEEEEeCCCCceEEee----------cCCCCcce---eEEecCCCEEEEEEcC---------CCeEEEE
Q 019290 171 FMSIATGDRSGRLLKYDPLKKNVTVMY----------NGLSFPNG---VALSNNNSFLLLAESA---------TLKILRF 228 (343)
Q Consensus 171 ~~~~~~~~~~~~v~~~d~~~~~~~~~~----------~~~~~~~~---i~~~~d~~~lyv~~~~---------~~~i~~~ 228 (343)
.+.++.+|..++....+. .....|.+ +++++|++.+|++... .+.|+++
T Consensus 233 ---------~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 233 ---------SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred ---------CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 346787877544322111 01112444 7899999999997542 3689999
Q ss_pred EccCccccccceeeecCCCCCCceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEE
Q 019290 229 WLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDV 306 (343)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~ 306 (343)
|..+... .+.+ ...+.|.++.+++||+ ++++++.. .+.|..+|. .++.+..
T Consensus 304 D~~t~~v---v~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~-----------------------~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 304 TGLVGQT---SSQI-SLGHDVDAISVAQDGGPDLYALSAG-----------------------TEVLHIYDAGAGDQDQS 356 (373)
T ss_pred ECCCCEE---EEEE-ECCCCcCeEEECCCCCeEEEEEcCC-----------------------CCeEEEEECCCCCEEee
Confidence 9865221 1222 3445699999999998 66665521 347888997 4666655
No 133
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.99 E-value=4.4e-07 Score=82.22 Aligned_cols=255 Identities=11% Similarity=0.053 Sum_probs=135.4
Q ss_pred ccccccCCCCCCCceEEEcCCCCeeEEEec----------CCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCC
Q 019290 25 SYQQLQLPGVVGPESLAFDCNGEGPYVGVS----------DGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEP 93 (343)
Q Consensus 25 ~~~~~~~~~~~~p~~l~~d~~g~~l~~~~~----------~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 93 (343)
...+++.. ..| .+++++||+.+|++.. ++.|..||..+.+.. .+.... ....
T Consensus 43 ~~~~i~~g--~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~--------------~~~~ 105 (361)
T 2oiz_A 43 FLGMVPTA--FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP--------------KRVQ 105 (361)
T ss_dssp EEEEEECC--EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT--------------TBCC
T ss_pred EEEEecCC--CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc--------------cccc
Confidence 34444444 368 9999999999997752 456999998775533 332110 0001
Q ss_pred CcCCeeeEEEeCCCCeEEEEeCC--CeEEEEeCCCCeEEEc-ccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccc
Q 019290 94 LCGRPLGIKFNPVTCDLYIADAY--FGLMVVGPNGGQAQQL-ASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQY 170 (343)
Q Consensus 94 ~~~~p~gi~~~~~~~~l~v~~~~--~gi~~~d~~~~~~~~~-~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~ 170 (343)
....|.+++++++++.||+++.. +.|..+|.++++.... .... ....+.+.+.+...+++...
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~------~~~~v~~~p~~~~~~~~~~~-------- 171 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA------GCWSVIPQPNRPRSFMTICG-------- 171 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT------TEEEEEECTTSSSEEEEEET--------
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC------CcceeEEcCCCCeeEEEECC--------
Confidence 22358899999967789999743 4599999998876432 2211 11123333421233333221
Q ss_pred eeeeeecCCCceEEEEeCC-CCceE------EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee
Q 019290 171 FMSIATGDRSGRLLKYDPL-KKNVT------VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA 243 (343)
Q Consensus 171 ~~~~~~~~~~~~v~~~d~~-~~~~~------~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (343)
.+.+..++.+ +++.. ........+..+...+++..+++.. ..+.++.+++.++.. .....+.
T Consensus 172 ---------dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~v~v~d~~~~~~-~~~~~~~ 240 (361)
T 2oiz_A 172 ---------DGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS-YYGNVYSADFSGDEV-KVDGPWS 240 (361)
T ss_dssp ---------TSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB-TTSEEEEEECSSSSC-EEEEEEE
T ss_pred ---------CCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe-CCCeEEEEEecCCCc-eeccccc
Confidence 2223333221 12221 1111122344444557777777665 467899999765321 1111110
Q ss_pred -------cCCCCCCc---eeeCCCC-CEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCC
Q 019290 244 -------EMPRFPDN---IKSDSKG-EFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNE 311 (343)
Q Consensus 244 -------~~~~~p~~---i~~d~~G-~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~ 311 (343)
.....|.+ ++++++| ++|++....+.... ...+...|..+|. .++.+..+....
T Consensus 241 ~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~--------------~~~~~~~v~viD~~t~~~v~~i~~~~ 306 (361)
T 2oiz_A 241 LLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT--------------HKFPAAEIWVMDTKTKQRVARIPGRD 306 (361)
T ss_dssp SCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTC--------------TTCCCSEEEEEETTTTEEEEEEECTT
T ss_pred ccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccc--------------ccCCCceEEEEECCCCcEEEEEecCC
Confidence 01112333 8889885 78887651010000 0000237888997 466666665421
Q ss_pred CCccCCceeEE--EeCCEEEEecCCCCeEEEEcC
Q 019290 312 GNTLNSVSEVQ--EYGEYLYTGSSVQPYVVVIKA 343 (343)
Q Consensus 312 ~~~~~~~~~~~--~~~g~l~i~~~~~~~i~~~~~ 343 (343)
+..+. +++..||+++. +.|.++|+
T Consensus 307 ------p~~ia~spdg~~l~v~n~--~~v~v~D~ 332 (361)
T 2oiz_A 307 ------ALSMTIDQQRNLMLTLDG--GNVNVYDI 332 (361)
T ss_dssp ------CCEEEEETTTTEEEEECS--SCEEEEEC
T ss_pred ------eeEEEECCCCCEEEEeCC--CeEEEEEC
Confidence 33333 34667888875 88998874
No 134
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.97 E-value=9.9e-07 Score=78.90 Aligned_cols=234 Identities=12% Similarity=0.049 Sum_probs=145.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCC--eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSG--WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
...++++.++|+.+.++..++.+..|+..+.+ ...... ..........+.+.+ ++.+..+
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~-----------------~~~h~~~v~~~~~~~-~~~l~s~ 160 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE-----------------LAGHTGYLSCCRFLD-DNQIVTS 160 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEE-----------------EECCSSCEEEEEEEE-TTEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEE-----------------ecCCCccEEEEEECC-CCcEEEE
Confidence 35688999999988888899999999986642 111100 011122355677776 6777777
Q ss_pred eCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV 193 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 193 (343)
.....|..+|.++++........ ...+..+++.+ +++++++... .+.|..||..++..
T Consensus 161 s~d~~i~~wd~~~~~~~~~~~~h----~~~v~~~~~~~-~~~~l~sg~~-----------------d~~v~~wd~~~~~~ 218 (340)
T 1got_B 161 SGDTTCALWDIETGQQTTTFTGH----TGDVMSLSLAP-DTRLFVSGAC-----------------DASAKLWDVREGMC 218 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCC----SSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEETTTCSE
T ss_pred ECCCcEEEEECCCCcEEEEEcCC----CCceEEEEECC-CCCEEEEEeC-----------------CCcEEEEECCCCee
Confidence 54445999999888654332221 13478899999 5887775433 45688888876664
Q ss_pred EE-eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCC--CCCCceeeCCCCCEEEEeccCCCc
Q 019290 194 TV-MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMP--RFPDNIKSDSKGEFWIAMNSARGK 270 (343)
Q Consensus 194 ~~-~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~G~lwi~~~~~~~~ 270 (343)
.. +.........++++|++..+. +...++.|..|++..... ...+.... .....++++++|++.++...
T Consensus 219 ~~~~~~h~~~v~~v~~~p~~~~l~-s~s~d~~v~iwd~~~~~~---~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~---- 290 (340)
T 1got_B 219 RQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDLRADQE---LMTYSHDNIICGITSVSFSKSGRLLLAGYD---- 290 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEE---EEEECCTTCCSCEEEEEECTTSSEEEEEET----
T ss_pred EEEEcCCcCCEEEEEEcCCCCEEE-EEcCCCcEEEEECCCCcE---EEEEccCCcccceEEEEECCCCCEEEEECC----
Confidence 43 333445578899999998655 445688999999865221 11221111 11234678999988887665
Q ss_pred cccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEE
Q 019290 271 IESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVI 341 (343)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~ 341 (343)
.+.|..+|. +++....+.... ..+..+... +|++.++......|.++
T Consensus 291 --------------------d~~i~vwd~~~~~~~~~~~~h~----~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 291 --------------------DFNCNVWDALKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp --------------------TSEEEEEETTTCCEEEEEECCS----SCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred --------------------CCeEEEEEcccCcEeeEeecCC----CcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 346777875 566666654322 245555444 55555555444555544
No 135
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.97 E-value=1.5e-06 Score=77.68 Aligned_cols=187 Identities=6% Similarity=0.012 Sum_probs=115.7
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||..++....... .....+..+++++++..|..+..
T Consensus 57 ~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-------------------~~~~~v~~~~~s~~~~~l~s~~~ 117 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP-------------------LRSSWVMTCAYAPSGNYVACGGL 117 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-------------------CSSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee-------------------cCCccEEEEEECCCCCEEEEEeC
Confidence 46789999999988889999999999987755332211 12234578889984444555543
Q ss_pred CCeEEEEeCCCCe--EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce
Q 019290 116 YFGLMVVGPNGGQ--AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV 193 (343)
Q Consensus 116 ~~gi~~~d~~~~~--~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 193 (343)
...+..++..++. .+... ...+ ....+..+.+.+ ++.+..+.. .+.|..||..+++.
T Consensus 118 d~~v~iw~~~~~~~~~~~~~-~~~~-h~~~v~~~~~~~-~~~l~s~s~------------------d~~i~~wd~~~~~~ 176 (340)
T 1got_B 118 DNICSIYNLKTREGNVRVSR-ELAG-HTGYLSCCRFLD-DNQIVTSSG------------------DTTCALWDIETGQQ 176 (340)
T ss_dssp TCEEEEEETTTCSBSCEEEE-EEEC-CSSCEEEEEEEE-TTEEEEEET------------------TSCEEEEETTTTEE
T ss_pred CCeEEEEECccCCCcceeEE-EecC-CCccEEEEEECC-CCcEEEEEC------------------CCcEEEEECCCCcE
Confidence 3448888886542 11111 1111 113456677777 477555332 45688889877765
Q ss_pred EEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 194 TVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 194 ~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.... ........++++++++. +++...++.|..|++..... ...+.........+++.++|+++++...
T Consensus 177 ~~~~~~h~~~v~~~~~~~~~~~-l~sg~~d~~v~~wd~~~~~~---~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 177 TTTFTGHTGDVMSLSLAPDTRL-FVSGACDASAKLWDVREGMC---RQTFTGHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCSE---EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEcCCCCceEEEEECCCCCE-EEEEeCCCcEEEEECCCCee---EEEEcCCcCCEEEEEEcCCCCEEEEEcC
Confidence 4333 33345688999998875 45556788999999864211 1222222222456788999988777655
No 136
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.96 E-value=1.8e-06 Score=77.09 Aligned_cols=191 Identities=10% Similarity=0.115 Sum_probs=116.3
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.++++..++.|..||..+++..... ......+..+++++++..|+.+..
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------------------~~h~~~v~~~~~~~~~~~l~s~~~ 94 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL-------------------DGHTGTIWSIDVDCFTKYCVTGSA 94 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE-------------------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh-------------------hhcCCcEEEEEEcCCCCEEEEEeC
Confidence 4678999999998888888999999998776543221 122234678999984445665644
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc---
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN--- 192 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--- 192 (343)
...|..+|.++++....... ...+..+++.+ ++..+++..... ....+.|..+|...+.
T Consensus 95 dg~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~-~~~~l~~~~~~~------------~~~~g~i~~~d~~~~~~~~ 156 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWKS-----PVPVKRVEFSP-CGNYFLAILDNV------------MKNPGSINIYEIERDSATH 156 (369)
T ss_dssp TTEEEEEETTTCCEEEEEEC-----SSCEEEEEECT-TSSEEEEEECCB------------TTBCCEEEEEEEEECTTTC
T ss_pred CCeEEEEECCCCcEEEEeec-----CCCeEEEEEcc-CCCEEEEecCCc------------cCCCCEEEEEEecCCccce
Confidence 44599999988775544331 13477899999 476655432210 0012456556543221
Q ss_pred ---------eEEeecC--CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEE
Q 019290 193 ---------VTVMYNG--LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFW 261 (343)
Q Consensus 193 ---------~~~~~~~--~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lw 261 (343)
...+... ......++++++++.++++ ..++.|..|++..... ....+.........++++++|++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l 233 (369)
T 3zwl_B 157 ELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG-HKDGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPDLTYF 233 (369)
T ss_dssp CEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE-ETTSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTTSSEE
T ss_pred eecccccceeeeccCCcCccceeEEEEcCCCCEEEEE-cCCCEEEEEECCCCcE--eEEEEecCCCceeEEEECCCCCEE
Confidence 1111111 1256788899999877665 4578999999865211 112222122234567888999766
Q ss_pred EEecc
Q 019290 262 IAMNS 266 (343)
Q Consensus 262 i~~~~ 266 (343)
++...
T Consensus 234 ~~~~~ 238 (369)
T 3zwl_B 234 ITSSR 238 (369)
T ss_dssp EEEET
T ss_pred EEecC
Confidence 66544
No 137
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.96 E-value=7.3e-08 Score=87.12 Aligned_cols=194 Identities=13% Similarity=0.079 Sum_probs=109.0
Q ss_pred CceEEEcCCCCeeEEEec------CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 37 PESLAFDCNGEGPYVGVS------DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~------~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
..++++.|||+.+.++.. ++.+..|+..++.... ..+ .........+..+++.+ ++.+
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~----------~~~-----~~~~~~~~~V~~~~~s~-d~~~ 108 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE----------SLC-----TAGVQTEAGVTDVAWVS-EKGI 108 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CG----------GGC-----SEEEECSSCEEEEEEET-TTEE
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcce----------eEe-----cccCCCCCCEEEEEEcC-CCCE
Confidence 468999999997776654 6778888765432110 000 00001122367899998 7888
Q ss_pred EEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC
Q 019290 111 YIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK 190 (343)
Q Consensus 111 ~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 190 (343)
+++.....|..+|..+++...............+..+++.+ +|+..++... .+.|..+|..+
T Consensus 109 l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~-----------------dg~v~iwd~~~ 170 (357)
T 4g56_B 109 LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGK-----------------DFSVKVWDLSQ 170 (357)
T ss_dssp EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEET-----------------TSCEEEEETTT
T ss_pred EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeC-----------------CCeEEEEECCC
Confidence 88754444888888776543222111111124578899999 5877665433 45688889887
Q ss_pred CceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCC-CEEEEec
Q 019290 191 KNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKG-EFWIAMN 265 (343)
Q Consensus 191 ~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwi~~~ 265 (343)
++..... ........+++++++..++++...++.|..|++..... .....+......+..+++.+++ +++++..
T Consensus 171 ~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~-~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 171 KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP-ATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC-BCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce-eeeeeeccccccccchhhhhcccceEEEee
Confidence 7654333 33455778999988876677777788999999765322 1110111112223446677764 5555443
No 138
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.96 E-value=9.3e-07 Score=79.47 Aligned_cols=237 Identities=10% Similarity=-0.020 Sum_probs=137.9
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
..++++.+++. +.++..+|.|..||..+++........ .......+..+++++++..|..+...
T Consensus 85 v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~---------------~~~H~~~V~~v~~spdg~~l~sgs~d 148 (344)
T 4gqb_B 85 VADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFC---------------KYEHDDIVSTVSVLSSGTQAVSGSKD 148 (344)
T ss_dssp EEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEE---------------EECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeecc---------------ccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 56889999976 778889999999998776532211100 00112346789999844445555433
Q ss_pred CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEe
Q 019290 117 FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVM 196 (343)
Q Consensus 117 ~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 196 (343)
..|..+|.++++........ ...+..+++.+.+..++++... .+.|..+|..+++....
T Consensus 149 ~~i~iwd~~~~~~~~~~~~h----~~~V~~~~~~~~~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~ 207 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSSYRAH----AAQVTCVAASPHKDSVFLSCSE-----------------DNRILLWDTRCPKPASQ 207 (344)
T ss_dssp SCEEEEETTTTEEEEEECCC----SSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTSSSCEEE
T ss_pred CeEEEEECCCCcEEEEEcCc----CCceEEEEecCCCCCceeeecc-----------------ccccccccccccceeee
Confidence 34999999988765432221 1357788888842356665432 45688889876664332
Q ss_pred e-c--CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEeccCCCccc
Q 019290 197 Y-N--GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMNSARGKIE 272 (343)
Q Consensus 197 ~-~--~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~~~~~~~~ 272 (343)
. . .......+++++++..++++...++.|..||+..... ...+.........+++.++|. +.++...
T Consensus 208 ~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~---~~~~~~h~~~v~~v~fsp~g~~~lasgs~------ 278 (344)
T 4gqb_B 208 IGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC---VLSSAVHSQCVTGLVFSPHSVPFLASLSE------ 278 (344)
T ss_dssp CC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C---CEEEECCSSCEEEEEECSSSSCCEEEEET------
T ss_pred eecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE---EEEEcCCCCCEEEEEEccCCCeEEEEEeC------
Confidence 2 1 2234578889887766777777789999999865221 222222222234577888884 4544433
Q ss_pred cccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEe--CCEEEEecCCCCeEEEE
Q 019290 273 SNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEY--GEYLYTGSSVQPYVVVI 341 (343)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~g~l~i~~~~~~~i~~~ 341 (343)
.+.|..+|.+...+..+.. ....+..+... +.+|..+...-..|.+.
T Consensus 279 ------------------D~~i~vwd~~~~~~~~~~~----H~~~V~~v~~sp~~~~llas~s~D~~v~~w 327 (344)
T 4gqb_B 279 ------------------DCSLAVLDSSLSELFRSQA----HRDFVRDATWSPLNHSLLTTVGWDHQVVHH 327 (344)
T ss_dssp ------------------TSCEEEECTTCCEEEEECC----CSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred ------------------CCeEEEEECCCCcEEEEcC----CCCCEEEEEEeCCCCeEEEEEcCCCeEEEE
Confidence 2467777875444333321 12345555433 34465554444455543
No 139
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.95 E-value=4.2e-07 Score=82.96 Aligned_cols=242 Identities=11% Similarity=0.053 Sum_probs=142.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCC--CeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANS--GWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
...++++.++|..+.++..++.|..|+..+. ...... ........+..++++++++.++++
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~-----------------~~~~h~~~v~~~~~~~~~~~~l~s 131 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMA-----------------RFSNHSSSVKTVKFNAKQDNVLAS 131 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEE-----------------ECCCSSSCCCEEEECSSSTTBEEE
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchh-----------------hccCCccceEEEEEcCCCCCEEEE
Confidence 4679999999998888888999999998761 111111 001222346789999842444444
Q ss_pred eCCCe-EEEEeCCCCe------EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEE
Q 019290 114 DAYFG-LMVVGPNGGQ------AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKY 186 (343)
Q Consensus 114 ~~~~g-i~~~d~~~~~------~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (343)
...+| |..+|.++++ ........ ......+..+++.+.++.++++... .+.|..+
T Consensus 132 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~v~iw 193 (416)
T 2pm9_A 132 GGNNGEIFIWDMNKCTESPSNYTPLTPGQS-MSSVDEVISLAWNQSLAHVFASAGS-----------------SNFASIW 193 (416)
T ss_dssp ECSSSCEEBCBTTTTSSCTTTCCCBCCCCS-CCSSCCCCEEEECSSCTTEEEEESS-----------------SSCEEEE
T ss_pred EcCCCeEEEEECCCCccccccccccccccc-cCCCCCeeEEEeCCCCCcEEEEEcC-----------------CCCEEEE
Confidence 34444 8899998765 11111111 1122457889999832566665433 4678889
Q ss_pred eCCCCceEEeecC-------CCCcceeEEecCCCEEEEEEcCCC---eEEEEEccCccccccceeee-cCCCCCCceeeC
Q 019290 187 DPLKKNVTVMYNG-------LSFPNGVALSNNNSFLLLAESATL---KILRFWLQGERTTYTPQLFA-EMPRFPDNIKSD 255 (343)
Q Consensus 187 d~~~~~~~~~~~~-------~~~~~~i~~~~d~~~lyv~~~~~~---~i~~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d 255 (343)
|..+++....... ......+++++++..++++...++ .|..|++..... ....+. ........++++
T Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~s 271 (416)
T 2pm9_A 194 DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT--PLQTLNQGHQKGILSLDWC 271 (416)
T ss_dssp ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS--CSBCCCSCCSSCEEEEEEC
T ss_pred ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC--CcEEeecCccCceeEEEeC
Confidence 9877665433322 345788999999865566656666 899999875211 111221 112223456778
Q ss_pred C-CCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CC-EEEEe
Q 019290 256 S-KGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GE-YLYTG 331 (343)
Q Consensus 256 ~-~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g-~l~i~ 331 (343)
+ +|+++++... .+.|..+|. .++.+..+....+ .+..+... ++ +++++
T Consensus 272 ~~~~~~l~s~~~------------------------dg~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 272 HQDEHLLLSSGR------------------------DNTVLLWNPESAEQLSQFPARGN----WCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp SSCSSCEEEEES------------------------SSEEEEECSSSCCEEEEEECSSS----CCCCEEECTTCTTEEEE
T ss_pred CCCCCeEEEEeC------------------------CCCEEEeeCCCCccceeecCCCC----ceEEEEECCCCCCEEEE
Confidence 7 7776666554 346777886 4666666653322 34444433 34 56666
Q ss_pred cCCCCeEEEEc
Q 019290 332 SSVQPYVVVIK 342 (343)
Q Consensus 332 ~~~~~~i~~~~ 342 (343)
......|.+++
T Consensus 324 ~~~d~~i~iw~ 334 (416)
T 2pm9_A 324 ASFDNKIEVQT 334 (416)
T ss_dssp CCSSSEEEEEE
T ss_pred EecCCcEEEEE
Confidence 66666666654
No 140
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.95 E-value=6.8e-07 Score=79.85 Aligned_cols=250 Identities=10% Similarity=0.025 Sum_probs=138.8
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++++.++++..++.|..||..+++...... ....+..+.+++++..++++..
T Consensus 76 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~~~~ 135 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK--------------------SPVPVKRVEFSPCGNYFLAILD 135 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--------------------CSSCEEEEEECTTSSEEEEEEC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee--------------------cCCCeEEEEEccCCCEEEEecC
Confidence 46789999999988888899999999988765443221 1224678999984555555543
Q ss_pred C-----CeEEEEeCCCCeE----EEccc-----ccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCc
Q 019290 116 Y-----FGLMVVGPNGGQA----QQLAS-----SAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSG 181 (343)
Q Consensus 116 ~-----~gi~~~d~~~~~~----~~~~~-----~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
. ..+..+|.+++.. ..... .........+..+++++ ++..+++... .+
T Consensus 136 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~-----------------dg 197 (369)
T 3zwl_B 136 NVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST-KGKYIIAGHK-----------------DG 197 (369)
T ss_dssp CBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG-GGCEEEEEET-----------------TS
T ss_pred CccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC-CCCEEEEEcC-----------------CC
Confidence 3 3477777654321 11000 00000112567788888 4665553322 46
Q ss_pred eEEEEeCCC-CceE-EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC
Q 019290 182 RLLKYDPLK-KNVT-VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE 259 (343)
Q Consensus 182 ~v~~~d~~~-~~~~-~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 259 (343)
.|..||..+ ++.. .+.........+++++++..++.+ ..++.|..|++..... ...+. .......++++++|+
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~---~~~~~-~~~~~~~~~~~~~~~ 272 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITS-SRDTNSFLVDVSTLQV---LKKYE-TDCPLNTAVITPLKE 272 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCE---EEEEE-CSSCEEEEEECSSSS
T ss_pred EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEe-cCCceEEEEECCCCce---eeeec-CCCCceeEEecCCCc
Confidence 788999876 3433 333344557889999999876655 4678999999875221 11221 222244577888887
Q ss_pred EEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCe
Q 019290 260 FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPY 337 (343)
Q Consensus 260 lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~ 337 (343)
..++....+...+ +.... ......+..+|. .++.+..+.... ..+..+... +++++++......
T Consensus 273 ~l~~~~~~~~~~~------~~~~~----~~~~~~i~~~d~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 273 FIILGGGQEAKDV------TTTSA----NEGKFEARFYHKIFEEEIGRVQGHF----GPLNTVAISPQGTSYASGGEDGF 338 (369)
T ss_dssp EEEEEECCC-----------------------CEEEEEETTTCCEEEEEECCS----SCEEEEEECTTSSEEEEEETTSE
T ss_pred eEEEeecCCCceE------EEEec----CCCcceeEEEecCCCcchhheeccc----CcEEEEEECCCCCEEEEEcCCCe
Confidence 6655443121100 00000 000113455554 455555554322 234444443 5555555555566
Q ss_pred EEEEc
Q 019290 338 VVVIK 342 (343)
Q Consensus 338 i~~~~ 342 (343)
|.+++
T Consensus 339 v~iw~ 343 (369)
T 3zwl_B 339 IRLHH 343 (369)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66554
No 141
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.95 E-value=3.3e-07 Score=83.23 Aligned_cols=218 Identities=13% Similarity=0.083 Sum_probs=122.5
Q ss_pred ccccccccCCC------CCCCceEEEcCCCCeeEEEec--CCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCC
Q 019290 23 SKSYQQLQLPG------VVGPESLAFDCNGEGPYVGVS--DGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEP 93 (343)
Q Consensus 23 ~~~~~~~~~~~------~~~p~~l~~d~~g~~l~~~~~--~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 93 (343)
.+...++++|. ...|+.+++++||+.+|++.. .+.|..+|..+.+.. .+.. +
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v-------------------~ 179 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV-------------------P 179 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-------------------C
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC-------------------C
Confidence 45567777763 347999999999999998753 578999999886543 2210 0
Q ss_pred CcCCeeeEEEeCCCCeEEEEeCCCe-EEEEeCCC-CeEEEccc-ccCCCCccCcceeEEeCCCCeEEEEeCCcccccccc
Q 019290 94 LCGRPLGIKFNPVTCDLYIADAYFG-LMVVGPNG-GQAQQLAS-SAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQY 170 (343)
Q Consensus 94 ~~~~p~gi~~~~~~~~l~v~~~~~g-i~~~d~~~-~~~~~~~~-~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~ 170 (343)
.+ .++ +.. +.+.|++.+.+| +..++.++ +++..... ..........+..+++..+|++++...
T Consensus 180 g~---~~~-~P~-g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~--------- 245 (386)
T 3sjl_D 180 DC---YHI-FPT-APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY--------- 245 (386)
T ss_dssp SE---EEE-EEE-ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT---------
T ss_pred Cc---cee-ecC-CCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC---------
Confidence 00 111 111 222222222223 44555443 33311000 000000112233455533687655332
Q ss_pred eeeeeecCCCceEEEEeCCCCceEEeec----------CCC---CcceeEEecCCCEEEEEEc---------CCCeEEEE
Q 019290 171 FMSIATGDRSGRLLKYDPLKKNVTVMYN----------GLS---FPNGVALSNNNSFLLLAES---------ATLKILRF 228 (343)
Q Consensus 171 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~----------~~~---~~~~i~~~~d~~~lyv~~~---------~~~~i~~~ 228 (343)
.+.|+.+|..++..+.... ... ....++++++++.+|++.. ..+.|+++
T Consensus 246 ---------~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 246 ---------TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp ---------TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred ---------CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 3579999986554332110 111 2234788999999999853 23689999
Q ss_pred EccCccccccceeeecCCCCCCceeeCCCCC--EEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEE
Q 019290 229 WLQGERTTYTPQLFAEMPRFPDNIKSDSKGE--FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVD 305 (343)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~--lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~ 305 (343)
|+.+... .+.+ .....|.++.+++||+ ||+++.. .+.|..+|. .++.+.
T Consensus 317 D~~t~kv---~~~i-~vg~~~~~lavs~D~~~~ly~tn~~------------------------~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 317 DAKTGER---LAKF-EMGHEIDSINVSQDEKPLLYALSTG------------------------DKTLYIHDAESGEELR 368 (386)
T ss_dssp ETTTCCE---EEEE-EEEEEECEEEECSSSSCEEEEEETT------------------------TTEEEEEETTTCCEEE
T ss_pred ECCCCeE---EEEE-ECCCCcceEEECCCCCeEEEEEcCC------------------------CCeEEEEECCCCcEEE
Confidence 9876322 1111 2233478999999985 4555544 347888997 688888
Q ss_pred EeeCC
Q 019290 306 VLDGN 310 (343)
Q Consensus 306 ~~~~~ 310 (343)
.+..+
T Consensus 369 ~i~~~ 373 (386)
T 3sjl_D 369 SVNQL 373 (386)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 88654
No 142
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.94 E-value=1.9e-07 Score=86.51 Aligned_cols=193 Identities=18% Similarity=0.158 Sum_probs=120.5
Q ss_pred CceEEEcC-CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 37 PESLAFDC-NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 37 p~~l~~d~-~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
..+|++.| +++++.++..+|.|..||..+++...+... ......+.++++++.++.++++..
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~-----------------~gH~~~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG-----------------IGAGGSITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC-----------------CSSSCCCCEEEECSSCTTEEEEEC
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc-----------------cCCCCCEEEEEEeCCCCCEEEEEe
Confidence 56899998 466677888999999999876543332210 112234678999874555444435
Q ss_pred CCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 116 YFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 116 ~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
.+| |..+|.+++..+.+..... ....+..+++++ ++.+.++... .+.|..+|..+..+.
T Consensus 185 ~D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~l~~g~~-----------------dg~i~~wd~~~~~~~ 244 (435)
T 4e54_B 185 MEGTTRLQDFKGNILRVFASSDT--INIWFCSLDVSA-SSRMVVTGDN-----------------VGNVILLNMDGKELW 244 (435)
T ss_dssp SSSCEEEEETTSCEEEEEECCSS--CSCCCCCEEEET-TTTEEEEECS-----------------SSBEEEEESSSCBCC
T ss_pred CCCEEEEeeccCCceeEEeccCC--CCccEEEEEECC-CCCEEEEEeC-----------------CCcEeeeccCcceeE
Confidence 555 8899998776655432211 123467788999 5776665433 567888888765554
Q ss_pred EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 195 VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 195 ~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.+.........++++|++..++++...++.|..|++.....................++++++|+..++...
T Consensus 245 ~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 245 NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred EEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcC
Confidence 444444557889999998877777777889999998642210111110011111234567888876666544
No 143
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.93 E-value=5.6e-08 Score=87.38 Aligned_cols=187 Identities=13% Similarity=0.107 Sum_probs=116.4
Q ss_pred CeeeEEEeCCCCeEEEEeC------------CCe-EEEEeCC--CCeEEEccccc--CCCCccCcceeEEeC-CCC--eE
Q 019290 97 RPLGIKFNPVTCDLYIADA------------YFG-LMVVGPN--GGQAQQLASSA--GGIPFRFTNDLDIDP-NTG--IV 156 (343)
Q Consensus 97 ~p~gi~~~~~~~~l~v~~~------------~~g-i~~~d~~--~~~~~~~~~~~--~~~~~~~~~~i~~d~-~dg--~l 156 (343)
.|.+|.+++ +|.+|++.. ..| |+++|++ +++.+.+.... .....-.|++|.+.. .+| +|
T Consensus 51 G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 467888887 889999851 344 9999987 34555553322 111224688888743 124 68
Q ss_pred EEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee----cCCCCcceeEEecCCCEEEEEEc------------
Q 019290 157 YFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY----NGLSFPNGVALSNNNSFLLLAES------------ 220 (343)
Q Consensus 157 ~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~----~~~~~~~~i~~~~d~~~lyv~~~------------ 220 (343)
|+.+... +.....|++++++++....+. ..+..+|+++++++|+ +|++++
T Consensus 130 ~Vvnh~~-------------~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e 195 (355)
T 3sre_A 130 LVVNHPG-------------SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWE 195 (355)
T ss_dssp EEEECST-------------TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHH
T ss_pred EEEECCC-------------CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccch
Confidence 8887651 112345889998765543321 2356799999999875 788765
Q ss_pred -----CCCeEEEEEccCccccccceeeecCCCCCCceeeCCCC-CEEEEeccCCCccccccccccccccCCCcccCCCeE
Q 019290 221 -----ATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKG-EFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVG 294 (343)
Q Consensus 221 -----~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 294 (343)
..++|++++.. +.+.+...-..|+|+++++|| .+|+++.. ...|
T Consensus 196 ~~~~~~~g~vyr~d~~------~~~~~~~~l~~pNGia~spDg~~lYvadt~------------------------~~~I 245 (355)
T 3sre_A 196 MHLGLAWSFVTYYSPN------DVRVVAEGFDFANGINISPDGKYVYIAELL------------------------AHKI 245 (355)
T ss_dssp HHTTCCCEEEEEECTT------CCEEEEEEESSEEEEEECTTSSEEEEEEGG------------------------GTEE
T ss_pred hhccCCccEEEEEECC------eEEEeecCCcccCcceECCCCCEEEEEeCC------------------------CCeE
Confidence 24689888752 223333322359999999998 68999876 2356
Q ss_pred EEEC--CCCCEE--EEeeCCCCCccCCceeEEEe-C-CEEEEecC
Q 019290 295 VKFD--VNGNVV--DVLDGNEGNTLNSVSEVQEY-G-EYLYTGSS 333 (343)
Q Consensus 295 ~~~d--~~g~~~--~~~~~~~~~~~~~~~~~~~~-~-g~l~i~~~ 333 (343)
++|+ ++|+.. ..+..+ ..+-.+..+ + |+||++..
T Consensus 246 ~~~~~~~~g~l~~~~~~~~~-----g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 246 HVYEKHANWTLTPLRVLSFD-----TLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEECTTSCEEEEEEEECS-----SEEEEEEECTTTCCEEEEEE
T ss_pred EEEEECCCCcEecCEEEeCC-----CCCceEEEeCCCCcEEEEec
Confidence 6665 456542 233321 234455545 3 89999664
No 144
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.93 E-value=1.7e-06 Score=78.86 Aligned_cols=235 Identities=12% Similarity=0.046 Sum_probs=142.3
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.++++..++.|..||..+.....+. .....+..+++++++..|+.+..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~l~~~~~ 169 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLN--------------------FHRAPIVSVKWNKDGTHIISMDV 169 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEEC--------------------CCCSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeecc--------------------CCCccEEEEEECCCCCEEEEEec
Confidence 4678999999998888889999999995444333331 22234678999984555666654
Q ss_pred CCeEEEEeCCCCeEEEcccccCCC-----------CccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGI-----------PFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLL 184 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~-----------~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 184 (343)
...+..+|.++++........... ....+..+++.+ ++.++++.. .+.|.
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------------------~g~i~ 230 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-DDKFVIPGP------------------KGAIF 230 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE-TTEEEEECG------------------GGCEE
T ss_pred CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-CCEEEEEcC------------------CCeEE
Confidence 445999999887654432221110 001167788888 477666432 46788
Q ss_pred EEeCCCCceEE-eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEE
Q 019290 185 KYDPLKKNVTV-MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIA 263 (343)
Q Consensus 185 ~~d~~~~~~~~-~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~ 263 (343)
.+|..+++... +.........++++++++.++.+ ..++.|..|++..... ...+.........+++.++| ++++
T Consensus 231 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~-~l~~ 305 (425)
T 1r5m_A 231 VYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA-SDDGTLRIWHGGNGNS---QNCFYGHSQSIVSASWVGDD-KVIS 305 (425)
T ss_dssp EEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE-ETTSCEEEECSSSBSC---SEEECCCSSCEEEEEEETTT-EEEE
T ss_pred EEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCcc---ceEecCCCccEEEEEECCCC-EEEE
Confidence 89987665432 33334456789999999866555 4678999999765221 22222122234557788888 4444
Q ss_pred eccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEE
Q 019290 264 MNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVI 341 (343)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~ 341 (343)
... .+.|..+|. .++....+.... ..+..+... +++++++......|.++
T Consensus 306 ~~~------------------------d~~i~i~d~~~~~~~~~~~~~~----~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 306 CSM------------------------DGSVRLWSLKQNTLLALSIVDG----VPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp EET------------------------TSEEEEEETTTTEEEEEEECTT----CCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EeC------------------------CCcEEEEECCCCcEeEecccCC----ccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 433 246777886 455555554322 234444433 45555555555667666
Q ss_pred c
Q 019290 342 K 342 (343)
Q Consensus 342 ~ 342 (343)
+
T Consensus 358 ~ 358 (425)
T 1r5m_A 358 D 358 (425)
T ss_dssp E
T ss_pred E
Confidence 5
No 145
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.92 E-value=4.6e-08 Score=88.72 Aligned_cols=239 Identities=10% Similarity=-0.106 Sum_probs=133.4
Q ss_pred CccccccccCCCCCCCceEEEcCCCCeeEEEe----------cCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcc
Q 019290 22 SSKSYQQLQLPGVVGPESLAFDCNGEGPYVGV----------SDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTT 90 (343)
Q Consensus 22 ~~~~~~~~~~~~~~~p~~l~~d~~g~~l~~~~----------~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 90 (343)
+.+.+.+++++. .| ++++++||+.+|++. .++.|..+|+.+.+.. .+..... .
T Consensus 55 t~~v~~~i~vG~--~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~-------------~ 118 (368)
T 1mda_H 55 CGVTLGHSLGAF--LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA-------------P 118 (368)
T ss_dssp TTEEEEEEEECT--TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS-------------C
T ss_pred CCeEEEEEeCCC--CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc-------------c
Confidence 356677777775 58 899999999899775 3577999999886543 3221000 0
Q ss_pred cCCCcCCeeeEEEeCCCCeEEEEeCC--CeEEE--EeCCCCeEEEcccccCCCCccCcce----eEEeCCCCeEEEEeCC
Q 019290 91 LEPLCGRPLGIKFNPVTCDLYIADAY--FGLMV--VGPNGGQAQQLASSAGGIPFRFTND----LDIDPNTGIVYFTDSS 162 (343)
Q Consensus 91 ~~~~~~~p~gi~~~~~~~~l~v~~~~--~gi~~--~d~~~~~~~~~~~~~~~~~~~~~~~----i~~d~~dg~l~v~~~~ 162 (343)
.......|++++++++++.+|+++.. +.+.. +|+.+ +..+. .... ....+.+ ++..+ ||++.+.+..
T Consensus 119 ~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~-v~~~-~~~~p~g~~~~~~~~~-dg~~~~vd~~ 193 (368)
T 1mda_H 119 RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTK-SASC-FHIHPGAAATHYLGSC-PASLAASDLA 193 (368)
T ss_dssp SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEE-CSSC-CCCEEEETTEEECCCC-TTSCEEEECC
T ss_pred ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEE-CCCc-eEEccCCCeEEEEEcC-CCCEEEEECc
Confidence 00112458999999977789999753 34777 88876 33331 1100 0000111 22223 2333222221
Q ss_pred c------cc--------ccccce------eeeeecCCCceEEEEeCCCCceEEeec----------CCCCcce---eEEe
Q 019290 163 I------YF--------QRRQYF------MSIATGDRSGRLLKYDPLKKNVTVMYN----------GLSFPNG---VALS 209 (343)
Q Consensus 163 ~------~~--------~~~~~~------~~~~~~~~~~~v~~~d~~~~~~~~~~~----------~~~~~~~---i~~~ 209 (343)
. .. ...... ...+.... +.|+.+|..++..+.+.. ....|.+ ++++
T Consensus 194 ~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s 272 (368)
T 1mda_H 194 AAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272 (368)
T ss_dssp SSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE
T ss_pred cccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEc
Confidence 1 00 000000 00011111 457777765433222110 1112344 8899
Q ss_pred cCCCEEEEEEc-C-------CCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEec-cCCCcccccccccc
Q 019290 210 NNNSFLLLAES-A-------TLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMN-SARGKIESNKKTAF 279 (343)
Q Consensus 210 ~d~~~lyv~~~-~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~-~~~~~~~~~~~~~~ 279 (343)
+|++.+|++.. . .+.+.++|+..... ...+ .....|.++++++||+ +|++++ .
T Consensus 273 ~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v---v~~i-~vg~~p~gi~~s~Dg~~l~va~~~~------------- 335 (368)
T 1mda_H 273 KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT---SGPI-SNGHDSDAIIAAQDGASDNYANSAG------------- 335 (368)
T ss_dssp TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE---EECC-EEEEEECEEEECCSSSCEEEEEETT-------------
T ss_pred CCCCEEEEEeccccCcccccCCCEEEEECCCCeE---EEEE-ECCCCcceEEECCCCCEEEEEccCC-------------
Confidence 99999999754 2 34677999765322 1111 1233599999999995 899987 4
Q ss_pred ccccCCCcccCCCeEEEECC-CCCEEEEeeCC
Q 019290 280 CEETAKPWFLRDPVGVKFDV-NGNVVDVLDGN 310 (343)
Q Consensus 280 ~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~ 310 (343)
.+.|..+|. .++.+..+...
T Consensus 336 -----------~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 336 -----------TEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp -----------TTEEEEEESSSCEEEEECCCC
T ss_pred -----------CCeEEEEECCCCcEEEEEECC
Confidence 358889997 57777776543
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.92 E-value=3.8e-07 Score=78.65 Aligned_cols=168 Identities=10% Similarity=-0.003 Sum_probs=102.2
Q ss_pred cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeEEEEeCCC-CeEEEc
Q 019290 54 SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNG-GQAQQL 132 (343)
Q Consensus 54 ~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~d~~~-~~~~~~ 132 (343)
.++.|+.+|..+++...+.. ....+..+++++++..|+++ ....|+.+|.++ ++...+
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~--------------------~~~~v~~~~~spdg~~l~~~-~~~~i~~~d~~~~~~~~~~ 78 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQ--------------------TPELFEAPNWSPDGKYLLLN-SEGLLYRLSLAGDPSPEKV 78 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEE--------------------ESSCCEEEEECTTSSEEEEE-ETTEEEEEESSSCCSCEEC
T ss_pred cceeEEEEeCCCCceeeecc--------------------CCcceEeeEECCCCCEEEEE-cCCeEEEEeCCCCCCceEe
Confidence 46689999988876554432 11245688999844455555 456799999998 776655
Q ss_pred ccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCC
Q 019290 133 ASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNN 212 (343)
Q Consensus 133 ~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~ 212 (343)
.... ....+..+++.+ +|+.++..... ......|+.++..+++...+.. ......+++++++
T Consensus 79 ~~~~---~~~~~~~~~~sp-dg~~l~~~~~~-------------~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~spdg 140 (297)
T 2ojh_A 79 DTGF---ATICNNDHGISP-DGALYAISDKV-------------EFGKSAIYLLPSTGGTPRLMTK-NLPSYWHGWSPDG 140 (297)
T ss_dssp CCTT---CCCBCSCCEECT-TSSEEEEEECT-------------TTSSCEEEEEETTCCCCEECCS-SSSEEEEEECTTS
T ss_pred cccc---ccccccceEECC-CCCEEEEEEeC-------------CCCcceEEEEECCCCceEEeec-CCCccceEECCCC
Confidence 3222 123567899999 47644433210 1124679999987776655433 2346778899999
Q ss_pred CEEEEEEcCCCe--EEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEe
Q 019290 213 SFLLLAESATLK--ILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAM 264 (343)
Q Consensus 213 ~~lyv~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~ 264 (343)
+.++++....+. ||.++..+ .....+......+..++++++|+ ++++.
T Consensus 141 ~~l~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 141 KSFTYCGIRDQVFDIYSMDIDS----GVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp SEEEEEEEETTEEEEEEEETTT----CCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred CEEEEEECCCCceEEEEEECCC----CcceEcccCCCccccceECCCCCEEEEEe
Confidence 988866555564 44444443 22223322233345677889987 44444
No 147
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.91 E-value=2.9e-06 Score=77.57 Aligned_cols=183 Identities=10% Similarity=-0.029 Sum_probs=119.7
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.++++..+|.|..||..+++..... ......+..+.++ +..++.+..
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------------------~~~~~~v~~~~~~--~~~l~~~~~ 194 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM-------------------AGHQARVGCLSWN--RHVLSSGSR 194 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-------------------CCCSSCEEEEEEE--TTEEEEEET
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe-------------------cCCCCceEEEEEC--CCEEEEEcC
Confidence 5679999999998888889999999998776543221 1122345677775 467777755
Q ss_pred CCeEEEEeCCCC-eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 116 YFGLMVVGPNGG-QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 116 ~~gi~~~d~~~~-~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
...|..+|.+.. ......... ...+..+++.+ ++.++++... .+.|..||..+++..
T Consensus 195 dg~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~~~-~~~~l~s~~~-----------------d~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 195 SGAIHHHDVRIANHQIGTLQGH----SSEVCGLAWRS-DGLQLASGGN-----------------DNVVQIWDARSSIPK 252 (401)
T ss_dssp TSEEEEEETTSSSCEEEEEECC----SSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEETTCSSEE
T ss_pred CCCEEEEecccCcceeeEEcCC----CCCeeEEEEcC-CCCEEEEEeC-----------------CCeEEEccCCCCCcc
Confidence 555899998743 222111111 13578899999 5776664432 457888998766554
Q ss_pred E-eecCCCCcceeEEecCCCEEEEEEc--CCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEec
Q 019290 195 V-MYNGLSFPNGVALSNNNSFLLLAES--ATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMN 265 (343)
Q Consensus 195 ~-~~~~~~~~~~i~~~~d~~~lyv~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~ 265 (343)
. +.........+++++++..++++.. .++.|..|++..... ...+ ........+++.++|+..++..
T Consensus 253 ~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~---~~~~-~~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 253 FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR---VNTV-DAGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE---EEEE-ECSSCEEEEEECSSSSEEEEEE
T ss_pred EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE---EEEE-eCCCcEEEEEECCCCCeEEEEe
Confidence 3 3334456789999998887887754 689999999875221 1122 2222345678889998777643
No 148
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.91 E-value=3.1e-07 Score=82.66 Aligned_cols=188 Identities=10% Similarity=0.038 Sum_probs=117.8
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||..+++..... ......+..+++.+++..++++..
T Consensus 129 ~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~-------------------~~h~~~V~~~~~~~~~~~~l~s~s 189 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY-------------------RAHAAQVTCVAASPHKDSVFLSCS 189 (344)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-------------------CCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-------------------cCcCCceEEEEecCCCCCceeeec
Confidence 3578999999998888899999999999876543221 112234678889884556665434
Q ss_pred CCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce-
Q 019290 116 YFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV- 193 (343)
Q Consensus 116 ~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~- 193 (343)
.++ |..+|.++++........ .....+..+++.+.+++++++... .+.|..||..+++.
T Consensus 190 ~D~~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~l~sg~~-----------------dg~v~~wd~~~~~~~ 250 (344)
T 4gqb_B 190 EDNRILLWDTRCPKPASQIGCS--APGYLPTSLAWHPQQSEVFVFGDE-----------------NGTVSLVDTKSTSCV 250 (344)
T ss_dssp TTSCEEEEETTSSSCEEECC------CCCEEEEEECSSCTTEEEEEET-----------------TSEEEEEESCC--CC
T ss_pred cccccccccccccceeeeeecc--eeeccceeeeecCCCCcceEEecc-----------------CCcEEEEECCCCcEE
Confidence 444 899999877643322111 112346778888754566654322 45688888876654
Q ss_pred EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEec
Q 019290 194 TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAMN 265 (343)
Q Consensus 194 ~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~~ 265 (343)
..+.........++++|++..+.++.+.++.|..||... ++...+..-.+....+++.++|. +.++..
T Consensus 251 ~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~----~~~~~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 251 LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL----SELFRSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC----CEEEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC----CcEEEEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 334444456788999999876666767789999999765 22222211122244577888874 554443
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.90 E-value=2.8e-07 Score=91.15 Aligned_cols=159 Identities=13% Similarity=0.060 Sum_probs=96.3
Q ss_pred CCceEEEcCCCCeeEEEec-CC-----EEEEEEcCCCCeEEeeecCCCc-cccccCCCCCcccCC----CcCCeeeEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVS-DG-----RILKWKAANSGWTEFATTAPHR-AREICDGSTNTTLEP----LCGRPLGIKFN 104 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~-~g-----~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~p~gi~~~ 104 (343)
.+.++++++||+.+++... ++ .|+.+|..+++...+....... ............... ....+..++++
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 5789999999997776655 66 8999999888766554221100 000000000000000 00124578899
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCC---eEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCC
Q 019290 105 PVTCDLYIADAYFGLMVVGPNGG---QAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRS 180 (343)
Q Consensus 105 ~~~~~l~v~~~~~gi~~~d~~~~---~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
+++..|+++. ...|+.+|.+++ +.+.+... ...+..+++.| ||+ |.++. .
T Consensus 118 pDg~~l~~~~-~~~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~SP-DG~~la~~~-------------------~ 171 (741)
T 2ecf_A 118 PDAQRLLFPL-GGELYLYDLKQEGKAAVRQLTHG-----EGFATDAKLSP-KGGFVSFIR-------------------G 171 (741)
T ss_dssp TTSSEEEEEE-TTEEEEEESSSCSTTSCCBCCCS-----SSCEEEEEECT-TSSEEEEEE-------------------T
T ss_pred CCCCEEEEEe-CCcEEEEECCCCCcceEEEcccC-----CcccccccCCC-CCCEEEEEe-------------------C
Confidence 9555677775 467999999887 55443221 13467889999 576 44422 2
Q ss_pred ceEEEEeCCCCceEEeecCCCC-----------------cceeEEecCCCEEEEEEc
Q 019290 181 GRLLKYDPLKKNVTVMYNGLSF-----------------PNGVALSNNNSFLLLAES 220 (343)
Q Consensus 181 ~~v~~~d~~~~~~~~~~~~~~~-----------------~~~i~~~~d~~~lyv~~~ 220 (343)
+.|+.+|..+++...+...... ...++++|||+.|+++..
T Consensus 172 ~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 172 RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 3699999887776655433221 467899999998887754
No 150
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.90 E-value=3.8e-06 Score=73.76 Aligned_cols=156 Identities=11% Similarity=0.047 Sum_probs=103.1
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.|+|..+.++..++.|..||..++....... ........+.+.++++.|..+..
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~l~s~s~ 75 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ-------------------VTETPVRAGKFIARKNWIIVGSD 75 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-------------------CCSSCEEEEEEEGGGTEEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee-------------------ccCCcEEEEEEeCCCCEEEEECC
Confidence 47899999999988888999999999988764322111 11123567888884555666654
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCC-ceE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKK-NVT 194 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~~~ 194 (343)
...|..+|.++++........ ...+..+++.+ ++.+.++... .+.|..+|..++ ...
T Consensus 76 d~~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~-~~~~l~sgs~-----------------D~~v~lWd~~~~~~~~ 133 (304)
T 2ynn_A 76 DFRIRVFNYNTGEKVVDFEAH----PDYIRSIAVHP-TKPYVLSGSD-----------------DLTVKLWNWENNWALE 133 (304)
T ss_dssp TSEEEEEETTTCCEEEEEECC----SSCEEEEEECS-SSSEEEEEET-----------------TSCEEEEEGGGTTEEE
T ss_pred CCEEEEEECCCCcEEEEEeCC----CCcEEEEEEcC-CCCEEEEECC-----------------CCeEEEEECCCCcchh
Confidence 445999999887654322221 13578999999 5776665433 456777886654 222
Q ss_pred -EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 195 -VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 195 -~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.+.........++++|++..++++...++.|..|++..
T Consensus 134 ~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 23333345678999985434556666789999999864
No 151
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.90 E-value=7.3e-07 Score=81.86 Aligned_cols=201 Identities=9% Similarity=-0.014 Sum_probs=115.7
Q ss_pred CCCCCceEEEcCCCCeeEEEecC------CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 33 GVVGPESLAFDCNGEGPYVGVSD------GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~~------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
+...|+.+...++| ++.+...+ +++..+|.++.+...-.... ......+.++.+.++
T Consensus 136 g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~----------------~~~~~~~Yd~~~~p~ 198 (462)
T 2ece_A 136 GYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID----------------RGDQYLAYDFWWNLP 198 (462)
T ss_dssp CEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB----------------CTTCCCCCCEEEETT
T ss_pred CCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC----------------CCCccccceEEECCC
Confidence 44579999999999 44433333 68999999886644321100 011122445777884
Q ss_pred CCeEEEEeC-------------------CCeEEEEeCCCCeEEEcccccCCCCccCcceeEE--eCCCCeEEEEeCCccc
Q 019290 107 TCDLYIADA-------------------YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDI--DPNTGIVYFTDSSIYF 165 (343)
Q Consensus 107 ~~~l~v~~~-------------------~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~--d~~dg~l~v~~~~~~~ 165 (343)
.+.++++++ .+.|..+|.++++........ .....+..+.+ +++...+|++..-+.
T Consensus 199 ~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg--~~g~~P~~i~f~~~Pdg~~aYV~~e~~~- 275 (462)
T 2ece_A 199 NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG--EENRMALELRPLHDPTKLMGFINMVVSL- 275 (462)
T ss_dssp TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC--TTEEEEEEEEECSSTTCCEEEEEEEEET-
T ss_pred CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC--CCCCccceeEeeECCCCCEEEEEEeeec-
Confidence 555555542 356999999887654432221 11234666655 884345777653000
Q ss_pred ccccceeeeeecCCCceEEEEeCCCCceEEee-----c-----C-----------CCCcceeEEecCCCEEEEEEcCCCe
Q 019290 166 QRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY-----N-----G-----------LSFPNGVALSNNNSFLLLAESATLK 224 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-----~-----~-----------~~~~~~i~~~~d~~~lyv~~~~~~~ 224 (343)
..-.+.|+++..+.++..... . . ...+.+|.+++|+++||+++...+.
T Consensus 276 -----------~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~ 344 (462)
T 2ece_A 276 -----------KDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE 344 (462)
T ss_dssp -----------TTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE
T ss_pred -----------cCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE
Confidence 000334443322224322110 0 0 2457899999999999999999999
Q ss_pred EEEEEccCccccccceeee-c-------------CCCCCCceeeCCCCC-EEEEe
Q 019290 225 ILRFWLQGERTTYTPQLFA-E-------------MPRFPDNIKSDSKGE-FWIAM 264 (343)
Q Consensus 225 i~~~~~~~~~~~~~~~~~~-~-------------~~~~p~~i~~d~~G~-lwi~~ 264 (343)
|.+|++...........+. . ..+.|.++.+++||+ ||++.
T Consensus 345 VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 345 VRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999986332101111111 0 112499999999995 66665
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.89 E-value=3.8e-07 Score=90.27 Aligned_cols=202 Identities=10% Similarity=0.101 Sum_probs=117.8
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCC---CeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANS---GWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
..++++++||+.+++... +.|+.+|..++ ....+. .....+..++++++++.|.++
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~--------------------~~~~~~~~~~~SPDG~~la~~ 169 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLT--------------------HGEGFATDAKLSPKGGFVSFI 169 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCC--------------------CSSSCEEEEEECTTSSEEEEE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcc--------------------cCCcccccccCCCCCCEEEEE
Confidence 578999999996666554 88999998876 433221 122346788999955557666
Q ss_pred eCCCeEEEEeCCCCeEEEcccccCCC------------CccCcceeEEeCCCCe-EEEEeCCc-cccc------------
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAGGI------------PFRFTNDLDIDPNTGI-VYFTDSSI-YFQR------------ 167 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~~~------------~~~~~~~i~~d~~dg~-l~v~~~~~-~~~~------------ 167 (343)
. ...|+.+|.++++...+....... ....+.++++.+ ||+ |+++.... ....
T Consensus 170 ~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~ 247 (741)
T 2ecf_A 170 R-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTD 247 (741)
T ss_dssp E-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEE
T ss_pred e-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCccc
Confidence 4 457999999988877654321110 011246789999 566 55543210 0000
Q ss_pred -ccceeeee-ecCCCceEEEEeCCC-CceEEeecC---CCCcceeEEecCCCEEEEEEc----CCCeEEEEEccCccccc
Q 019290 168 -RQYFMSIA-TGDRSGRLLKYDPLK-KNVTVMYNG---LSFPNGVALSNNNSFLLLAES----ATLKILRFWLQGERTTY 237 (343)
Q Consensus 168 -~~~~~~~~-~~~~~~~v~~~d~~~-~~~~~~~~~---~~~~~~i~~~~d~~~lyv~~~----~~~~i~~~~~~~~~~~~ 237 (343)
....+... .......|+.+|.++ ++...+... ......+++ +||+.|+++.. ....|+++++.+.
T Consensus 248 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g---- 322 (741)
T 2ecf_A 248 VIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN---- 322 (741)
T ss_dssp EEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC----
T ss_pred ceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC----
Confidence 00000000 000122688899887 776554322 233567889 99998887653 2467888987652
Q ss_pred cceeeec--CCC---CCCceeeCCCCCEEEEecc
Q 019290 238 TPQLFAE--MPR---FPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 238 ~~~~~~~--~~~---~p~~i~~d~~G~lwi~~~~ 266 (343)
+...+.. ..+ ....+++.+||+++++...
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 356 (741)
T 2ecf_A 323 QQRVLAHETSPTWVPLHNSLRFLDDGSILWSSER 356 (741)
T ss_dssp CEEEEEEEECSSCCCCCSCCEECTTSCEEEEECT
T ss_pred ceEEEEEcCCCCcCCcCCceEECCCCeEEEEecC
Confidence 2222221 111 1346788999986665544
No 153
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.89 E-value=2.1e-06 Score=76.20 Aligned_cols=186 Identities=13% Similarity=0.097 Sum_probs=121.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.+..|+..+++...... ........+++++++..|..+..
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~-------------------~~~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-------------------TRGKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE-------------------CSSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec-------------------CCCceEEEEEECCCCCEEEEEcC
Confidence 46689999999988888999999999987765432211 11223568899984445555543
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...|..+|.++++........ ...+..+++.+ ++.+.++... .+.|..||..+++...
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h----~~~v~~l~~sp-d~~~l~s~s~-----------------dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGH----AMPIRSLTFSP-DSQLLVTASD-----------------DGYIKIYDVQHANLAG 242 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCC----SSCCCEEEECT-TSCEEEEECT-----------------TSCEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEEEEEccc----CCceeEEEEcC-CCCEEEEEcC-----------------CCeEEEEECCCcceeE
Confidence 344999999988754332211 13478899999 5887775543 4568888887665543
Q ss_pred -eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 196 -MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 196 -~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
+.........++++|++..++ +...++.|..|++.... ....+.........++++++|+..++...
T Consensus 243 ~~~~h~~~v~~~~~sp~~~~l~-s~s~D~~v~iwd~~~~~---~~~~~~~h~~~v~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 243 TLSGHASWVLNVAFCPDDTHFV-SSSSDKSVKVWDVGTRT---CVHTFFDHQDQVWGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp EECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEcCCCCceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCE---EEEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence 333344567899999998655 44568899999986521 12222222222445778888877776554
No 154
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.89 E-value=5.9e-06 Score=75.41 Aligned_cols=235 Identities=14% Similarity=0.101 Sum_probs=138.0
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
..++++.++|+.+.++..++.|..||..+++...... .....+..+++.+++..|+.+...
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~-------------------~h~~~v~~~~~~p~~~~l~s~s~d 186 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ-------------------GHEQDIYSLDYFPSGDKLVSGSGD 186 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-------------------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-------------------cCCCCEEEEEEcCCCCEEEEecCC
Confidence 4589999999988888899999999988765433211 122346789999844556666444
Q ss_pred CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEe
Q 019290 117 FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVM 196 (343)
Q Consensus 117 ~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 196 (343)
..+..+|.++++....... ...+..+++.+.+++++++... .+.|..||..++.....
T Consensus 187 ~~v~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~s~-----------------d~~v~iwd~~~~~~~~~ 244 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSI-----EDGVTTVAVSPGDGKYIAAGSL-----------------DRAVRVWDSETGFLVER 244 (393)
T ss_dssp SEEEEEETTTTEEEEEEEC-----SSCEEEEEECSTTCCEEEEEET-----------------TSCEEEEETTTCCEEEE
T ss_pred CcEEEEECCCCeeEEEEEc-----CCCcEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCcEEEe
Confidence 4488999988875433221 1246678888744666664432 45688888776654322
Q ss_pred e--------cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCcccccc--------c-eeeecCCCCCCceeeCCCCC
Q 019290 197 Y--------NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYT--------P-QLFAEMPRFPDNIKSDSKGE 259 (343)
Q Consensus 197 ~--------~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~--------~-~~~~~~~~~p~~i~~d~~G~ 259 (343)
. ........++++++++.++ +...++.|..|++........ . ..+.........+++.++|.
T Consensus 245 ~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 323 (393)
T 1erj_A 245 LDSENESGTGHKDSVYSVVFTRDGQSVV-SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE 323 (393)
T ss_dssp EC------CCCSSCEEEEEECTTSSEEE-EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGC
T ss_pred ecccccCCCCCCCCEEEEEECCCCCEEE-EEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC
Confidence 1 1223467899999998665 455688999999864211000 0 01111111223456778887
Q ss_pred EEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-------CCEEEEe
Q 019290 260 FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-------GEYLYTG 331 (343)
Q Consensus 260 lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-------~g~l~i~ 331 (343)
+.++... .+.|..+|. .++.+..+..... .+..+... +++++++
T Consensus 324 ~l~sgs~------------------------D~~v~iwd~~~~~~~~~l~~h~~----~v~~v~~~~~~~~~p~~~~l~s 375 (393)
T 1erj_A 324 YILSGSK------------------------DRGVLFWDKKSGNPLLMLQGHRN----SVISVAVANGSSLGPEYNVFAT 375 (393)
T ss_dssp EEEEEET------------------------TSEEEEEETTTCCEEEEEECCSS----CEEEEEECSSCTTCTTCEEEEE
T ss_pred EEEEEeC------------------------CCeEEEEECCCCeEEEEECCCCC----CEEEEEecCCcCcCCCCCEEEE
Confidence 6666554 346777886 4666655543222 23333322 3566666
Q ss_pred cCCCCeEEEE
Q 019290 332 SSVQPYVVVI 341 (343)
Q Consensus 332 ~~~~~~i~~~ 341 (343)
+.....|.+.
T Consensus 376 gs~Dg~i~iW 385 (393)
T 1erj_A 376 GSGDCKARIW 385 (393)
T ss_dssp EETTSEEEEE
T ss_pred ECCCCcEEEC
Confidence 6555555544
No 155
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.87 E-value=3.6e-06 Score=77.37 Aligned_cols=153 Identities=9% Similarity=0.037 Sum_probs=103.0
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
..++++.+++..+.++..++.|..||..+++..... ......+..+++++ ++.++++...
T Consensus 111 V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l-------------------~~h~~~V~~v~~~~-~~~~l~sgs~ 170 (410)
T 1vyh_C 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL-------------------KGHTDSVQDISFDH-SGKLLASCSA 170 (410)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE-------------------CCCSSCEEEEEECT-TSSEEEEEET
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEE-------------------eccCCcEEEEEEcC-CCCEEEEEeC
Confidence 558999999998888899999999998876543221 11223467899998 5554444334
Q ss_pred Ce-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE-
Q 019290 117 FG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT- 194 (343)
Q Consensus 117 ~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 194 (343)
++ |..+|.++++........ ...+..+++.+ ++...++... .+.|..||..++...
T Consensus 171 D~~i~iwd~~~~~~~~~~~~h----~~~V~~v~~~p-~~~~l~s~s~-----------------D~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 171 DMTIKLWDFQGFECIRTMHGH----DHNVSSVSIMP-NGDHIVSASR-----------------DKTIKMWEVQTGYCVK 228 (410)
T ss_dssp TSCCCEEETTSSCEEECCCCC----SSCEEEEEECS-SSSEEEEEET-----------------TSEEEEEETTTCCEEE
T ss_pred CCeEEEEeCCCCceeEEEcCC----CCCEEEEEEeC-CCCEEEEEeC-----------------CCeEEEEECCCCcEEE
Confidence 44 888898876644332221 13578899999 4776664433 467888898776643
Q ss_pred EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 195 VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 195 ~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.+.........+++++++..+ ++...++.|..|++..
T Consensus 229 ~~~~h~~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 229 TFTGHREWVRMVRPNQDGTLI-ASCSNDQTVRVWVVAT 265 (410)
T ss_dssp EEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTT
T ss_pred EEeCCCccEEEEEECCCCCEE-EEEcCCCeEEEEECCC
Confidence 333344456778888988754 4555688999999865
No 156
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.87 E-value=9.2e-06 Score=71.26 Aligned_cols=155 Identities=11% Similarity=0.096 Sum_probs=103.2
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||..+++...... ........+.++++++.|+.+..
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~l~s~~~ 127 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-------------------GHSNYVFCCNFNPQSNLIVSGSF 127 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-------------------CCSSCEEEEEECSSSSEEEEEET
T ss_pred ceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc-------------------CCCCCEEEEEEcCCCCEEEEEeC
Confidence 46789999999988888899999999988765432211 12234567889884445555543
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...|..+|.++++........ ...+..+++.+ ++.++++... .+.|..||..+++...
T Consensus 128 d~~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~ 185 (312)
T 4ery_A 128 DESVRIWDVKTGKCLKTLPAH----SDPVSAVHFNR-DGSLIVSSSY-----------------DGLCRIWDTASGQCLK 185 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCC----SSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEETTTCCEEE
T ss_pred CCcEEEEECCCCEEEEEecCC----CCcEEEEEEcC-CCCEEEEEeC-----------------CCcEEEEECCCCceee
Confidence 344999999877644322211 13467889998 4776664432 4568888887665432
Q ss_pred -eec-CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 196 -MYN-GLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 196 -~~~-~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
+.. .......++++++++.++.+ ..++.|..|++..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~~~ 223 (312)
T 4ery_A 186 TLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSK 223 (312)
T ss_dssp EECCSSCCCEEEEEECTTSSEEEEE-ETTTEEEEEETTT
T ss_pred EEeccCCCceEEEEECCCCCEEEEE-cCCCeEEEEECCC
Confidence 222 22345678999999876655 4678999999865
No 157
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.86 E-value=1.3e-06 Score=79.17 Aligned_cols=193 Identities=14% Similarity=0.101 Sum_probs=124.0
Q ss_pred CCceEEEcCCC-CeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCC-CeEEEE
Q 019290 36 GPESLAFDCNG-EGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVT-CDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~g-~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~-~~l~v~ 113 (343)
...++++.++| +.+.++..++.|..||..+++....... ......+..+++.+.+ ..|+.+
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------------~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG-----------------MGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC-----------------CSTTCBEEEEEEETTEEEEEEEE
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec-----------------CCcCCceeEEEeCCCCCCEEEEE
Confidence 56799999998 7788888999999999987655443210 0123356789998833 445555
Q ss_pred eCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV 193 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 193 (343)
.....|..+|.++.....+.... . ....+..+++.+ ++.+.++... .+.|..+|......
T Consensus 138 ~~d~~i~iwd~~~~~~~~~~~~~-~-~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~i~d~~~~~~ 197 (383)
T 3ei3_B 138 SIRGATTLRDFSGSVIQVFAKTD-S-WDYWYCCVDVSV-SRQMLATGDS-----------------TGRLLLLGLDGHEI 197 (383)
T ss_dssp ETTTEEEEEETTSCEEEEEECCC-C-SSCCEEEEEEET-TTTEEEEEET-----------------TSEEEEEETTSCEE
T ss_pred eCCCEEEEEECCCCceEEEeccC-C-CCCCeEEEEECC-CCCEEEEECC-----------------CCCEEEEECCCCEE
Confidence 44445899999876655443211 1 124578899999 4776654332 46788899865555
Q ss_pred EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccc-eeeecCCCCCCceeeCC-CCCEEEEecc
Q 019290 194 TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTP-QLFAEMPRFPDNIKSDS-KGEFWIAMNS 266 (343)
Q Consensus 194 ~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~p~~i~~d~-~G~lwi~~~~ 266 (343)
..+.........++++++++.++++...++.|..|++......... ..+ ........+++++ +|++.++...
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 5555555667899999998845556667889999998752210111 111 2223345577888 8876665544
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.86 E-value=1.3e-06 Score=85.92 Aligned_cols=255 Identities=14% Similarity=0.106 Sum_probs=139.7
Q ss_pred CCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 35 VGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 35 ~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
..+.++++++++. +.++ .++.|+.+|..+++...+.. ....+..+++++++..|.++
T Consensus 82 ~~v~~~~~spd~~-~~~~-~~~~i~~~d~~~~~~~~l~~--------------------~~~~~~~~~~SpdG~~la~~- 138 (706)
T 2z3z_A 82 FPSFRTLDAGRGL-VVLF-TQGGLVGFDMLARKVTYLFD--------------------TNEETASLDFSPVGDRVAYV- 138 (706)
T ss_dssp CCCEEEEETTTTE-EEEE-ETTEEEEEETTTTEEEEEEC--------------------CTTCCTTCEECTTSSEEEEE-
T ss_pred cCceeEEECCCCe-EEEE-ECCEEEEEECCCCceEEccC--------------------CcccccCCcCCCCCCEEEEE-
Confidence 3578999999944 4433 45899999998876554431 11234567888844566665
Q ss_pred CCCeEEEEeCCC-----CeEEEcccccCC----------CCccCcceeEEeCCCCe-EEEEeC--Ccc--ccc-------
Q 019290 115 AYFGLMVVGPNG-----GQAQQLASSAGG----------IPFRFTNDLDIDPNTGI-VYFTDS--SIY--FQR------- 167 (343)
Q Consensus 115 ~~~gi~~~d~~~-----~~~~~~~~~~~~----------~~~~~~~~i~~d~~dg~-l~v~~~--~~~--~~~------- 167 (343)
....|+.++.++ ++...+...... .....+.++++.| ||+ |+++.. ... +..
T Consensus 139 ~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~ 217 (706)
T 2z3z_A 139 RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLE 217 (706)
T ss_dssp ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSS
T ss_pred ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCC
Confidence 356799999988 776654322111 0112257889999 576 444321 000 000
Q ss_pred ---ccceeeee-ecCCCceEEEEeCCCCceEEeecC---CCCcceeEEecCCCEEEEEEcCC----CeEEEEEccCcccc
Q 019290 168 ---RQYFMSIA-TGDRSGRLLKYDPLKKNVTVMYNG---LSFPNGVALSNNNSFLLLAESAT----LKILRFWLQGERTT 236 (343)
Q Consensus 168 ---~~~~~~~~-~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~i~~~~d~~~lyv~~~~~----~~i~~~~~~~~~~~ 236 (343)
....+... .......|+.+|.++++...+... ......+++++||+.++++.... ..|+.+++.+..
T Consensus 218 ~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-- 295 (706)
T 2z3z_A 218 AESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-- 295 (706)
T ss_dssp CEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--
T ss_pred CceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--
Confidence 00000000 011235699999988876654422 12356789999999888865432 388999987531
Q ss_pred ccceeee-c-CCC---CCCceeeCC--CCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeC
Q 019290 237 YTPQLFA-E-MPR---FPDNIKSDS--KGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDG 309 (343)
Q Consensus 237 ~~~~~~~-~-~~~---~p~~i~~d~--~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~ 309 (343)
..+.+. . ... ....+++.+ +|++.++....+ ...|+.++.+++....+..
T Consensus 296 -~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g----------------------~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 296 -FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG----------------------WNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp -EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS----------------------SCEEEEEETTSCEEEECCC
T ss_pred -eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC----------------------ccEEEEEECCCCEEEecCC
Confidence 222222 1 111 124578888 887555443312 1267777766666555532
Q ss_pred CCCCccCCcee-EE--EeCCEEEEecCCCC----eEEEEc
Q 019290 310 NEGNTLNSVSE-VQ--EYGEYLYTGSSVQP----YVVVIK 342 (343)
Q Consensus 310 ~~~~~~~~~~~-~~--~~~g~l~i~~~~~~----~i~~~~ 342 (343)
... .+.. +. ++++.||+++...+ .|.+++
T Consensus 353 ~~~----~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 353 GEW----EVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp SSS----CEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred CCe----EEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 211 1221 22 23456776665543 555543
No 159
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.86 E-value=2.7e-07 Score=86.18 Aligned_cols=179 Identities=15% Similarity=0.146 Sum_probs=102.7
Q ss_pred CCCCCceEEEcCCCC-eeEEEecCCEEEEEEcCCCC-eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC---C
Q 019290 33 GVVGPESLAFDCNGE-GPYVGVSDGRILKWKAANSG-WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV---T 107 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~-~l~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~ 107 (343)
++..|..|++.++|. .+|++...|+|+.+++++.. ...+....... ..+ ..........||+++++ +
T Consensus 12 gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~----~~g----~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 12 GLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLV----QSG----IKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTB----CCC----CSSSCCCSEEEEEECTTHHHH
T ss_pred CCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCccee----ccC----ccccCCCcceeeEeCCCCcCC
Confidence 567899999999985 57888889999999865431 11121111000 000 00011245689999983 4
Q ss_pred CeEEEEeCC-------------CeEEEEeCCCC--------eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccc
Q 019290 108 CDLYIADAY-------------FGLMVVGPNGG--------QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQ 166 (343)
Q Consensus 108 ~~l~v~~~~-------------~gi~~~d~~~~--------~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~ 166 (343)
+.||++-+. +.|.++....+ ..+.+..............|++++ ||.|||+.......
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~ 162 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMIT 162 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCC
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCC
Confidence 789987421 25777765321 122332222122234567899999 79999987543210
Q ss_pred cccceeeeeecCCCceEEEEeCCCC--------------------ceEEeecCCCCcceeEEecCC-----C-EEEEEEc
Q 019290 167 RRQYFMSIATGDRSGRLLKYDPLKK--------------------NVTVMYNGLSFPNGVALSNNN-----S-FLLLAES 220 (343)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~d~~~~--------------------~~~~~~~~~~~~~~i~~~~d~-----~-~lyv~~~ 220 (343)
..............++|+|+++++. ..+.+..+++.|.++++++.. + .+|+++.
T Consensus 163 ~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 163 LDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred CCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 0000000000122578999999863 234566788899999999872 2 4666654
No 160
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.84 E-value=3.1e-07 Score=83.21 Aligned_cols=225 Identities=11% Similarity=0.053 Sum_probs=118.5
Q ss_pred ccccccccCC-----CCCCCceEEEcCCCCeeEEEec--CCEEEEEEcCCCCeEEe-eecCC------Cccc-----ccc
Q 019290 23 SKSYQQLQLP-----GVVGPESLAFDCNGEGPYVGVS--DGRILKWKAANSGWTEF-ATTAP------HRAR-----EIC 83 (343)
Q Consensus 23 ~~~~~~~~~~-----~~~~p~~l~~d~~g~~l~~~~~--~g~i~~~d~~~~~~~~~-~~~~~------~~~~-----~~~ 83 (343)
.+..+++.++ ....|.+++++++|+.+|++.. .+.|..+|..+++...- ..... .+.. ..+
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEEC
Confidence 4455666654 2347999999999998997753 57899999887643321 10000 0000 000
Q ss_pred -CCC--------CCcc--------cCCCcCCeeeEEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEccc--cc------CC
Q 019290 84 -DGS--------TNTT--------LEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLAS--SA------GG 138 (343)
Q Consensus 84 -~~~--------~~~~--------~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~--~~------~~ 138 (343)
+|. .+.. .......|..+...+++..+|+......++.+|..+++...... .. ..
T Consensus 171 ~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T 2oiz_A 171 GDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKN 250 (361)
T ss_dssp TTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTT
T ss_pred CCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccc
Confidence 000 0000 00000112222222223345555443447777776543322110 00 00
Q ss_pred CCccCcceeEEeCCCCeEEEEeC-CcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEE
Q 019290 139 IPFRFTNDLDIDPNTGIVYFTDS-SIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLL 217 (343)
Q Consensus 139 ~~~~~~~~i~~d~~dg~l~v~~~-~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv 217 (343)
........++++++.+++|++.. ..... ........|+.+|.++++...-..... +.++++++||+.||+
T Consensus 251 ~~p~g~~~~a~~~dg~~lyv~~~~~~~~~--------~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v 321 (361)
T 2oiz_A 251 WVPGGYNLVGLHRASGRMYVFMHPDGKEG--------THKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLT 321 (361)
T ss_dssp CEECCSSCEEEETTTTEEEEEEESSCCTT--------CTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEE
T ss_pred cccCCeeEEEEecCCCeEEEEEccCCCcc--------cccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEE
Confidence 00012234788884478998753 10000 000013579999998887654333334 999999999999998
Q ss_pred EEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC
Q 019290 218 AESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE 259 (343)
Q Consensus 218 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 259 (343)
++. +.|.+||..+... .....+......|.+++++++|+
T Consensus 322 ~n~--~~v~v~D~~t~~l-~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 322 LDG--GNVNVYDISQPEP-KLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ECS--SCEEEEECSSSSC-EEEEEETTSCSSEEEEEECCCSC
T ss_pred eCC--CeEEEEECCCCcc-eeeEEeccCCCCcEEEEecCCCC
Confidence 874 8999999776210 11122222334688999999884
No 161
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.84 E-value=1.8e-06 Score=76.12 Aligned_cols=212 Identities=11% Similarity=0.141 Sum_probs=130.1
Q ss_pred CCCCeeEEEe--cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC-----
Q 019290 44 CNGEGPYVGV--SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY----- 116 (343)
Q Consensus 44 ~~g~~l~~~~--~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~----- 116 (343)
.+|..+|+.. .+++||+.+.++.....+... .+..+..+ ++.||++...
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~----------------------~~~~i~~~--g~~Iyy~~~~~~~~~ 78 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND----------------------TAMYINAD--KNYVYYVRNNNQKIT 78 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE----------------------EEEEEEEC--SSEEEEEEECC----
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC----------------------ceeeEEEc--CCEEEEEECCCCccc
Confidence 3555466543 368999999988776666421 13344443 6788877532
Q ss_pred ---------CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEe
Q 019290 117 ---------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYD 187 (343)
Q Consensus 117 ---------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 187 (343)
..|+++++++++.+.+... ..+.++++. +.||+++.. ......|++++
T Consensus 79 ~~~~~~~n~~~Iy~i~~dg~~~~~l~~~-------~~~~~s~~g--~~Iy~~~~~--------------~~~~~~Iy~~~ 135 (302)
T 3s25_A 79 SQTFFSYDRNSLCRIKRNGHGSTVLDPD-------PCIYASLIG--NYIYYLHYD--------------TQTATSLYRIR 135 (302)
T ss_dssp --CCSSCCSEEEEEEETTSCCCEEEECS-------CEEEEEEET--TEEEEEEES--------------SSSCEEEEEEE
T ss_pred ccceeccCCCeEEEEeCCCCcceEeecC-------CccEEEEeC--CEEEEEeec--------------CCCCceEEEEE
Confidence 2499999998776555321 123455654 799998711 01145799999
Q ss_pred CCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCC-CCEEEEecc
Q 019290 188 PLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSK-GEFWIAMNS 266 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~-G~lwi~~~~ 266 (343)
.++...+.+..... .+++++++.||+++....+|++.++++. ..+.+.. + +....++|+ |.|+.+.+.
T Consensus 136 ~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~----~~~~l~~--~-~~~~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 136 IDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ----SEALFYD--C-NCYKPVVLDDTNVYYMDVN 204 (302)
T ss_dssp TTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTT----EEEEEEC--S-CEEEEEEEETTEEEEEEGG
T ss_pred CCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCC----CEEEEeC--C-CccceeeecCCEEEEEEcC
Confidence 98777766654432 4457889999999887889999998873 3333322 1 223345554 467777665
Q ss_pred CCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEe-cCCCCeEEEEc
Q 019290 267 ARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTG-SSVQPYVVVIK 342 (343)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~-~~~~~~i~~~~ 342 (343)
.+ ..|++.+.+|.....+.. .. ...+.+.+++||.+ ......|.+++
T Consensus 205 ~~-----------------------~~I~~~~ldG~~~~~Lt~-~~-----~~~~~~~g~~Iy~~~~~~~~~i~~~~ 252 (302)
T 3s25_A 205 RD-----------------------NAIVHVNINNPNPVVLTE-AN-----IEHYNVYGSLIFYQRGGDNPALCVVK 252 (302)
T ss_dssp GT-----------------------TEEEEECSSSCCCEECSC-SC-----EEEEEEETTEEEEEECSSSCEEEEEE
T ss_pred CC-----------------------cEEEEEECCCCCeEEEeC-CC-----cceEEECCCEEEEEECCCCcEEEEEE
Confidence 22 267888888766555542 11 12244557788876 33445666654
No 162
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.84 E-value=2.8e-06 Score=77.74 Aligned_cols=153 Identities=11% Similarity=0.037 Sum_probs=100.0
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
..+++++++|+.++++..++.++.||..+.+.... ...........+.++++.|.++...
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~~~~~d 118 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKM--------------------LKRADYTAVDTAKLQMRRFILGTTE 118 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTT--------------------SCSCCEEEEEEECSSSCEEEEEETT
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeE--------------------EecCCceEEEEEecCCCEEEEEECC
Confidence 45899999999888888999999999866321100 0111112233456634455555433
Q ss_pred CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce-EE
Q 019290 117 FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV-TV 195 (343)
Q Consensus 117 ~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~ 195 (343)
..|..+|.++++........ ...+..+++.+ ++.+.++... .+.|..||..+++. ..
T Consensus 119 g~i~iwd~~~~~~~~~~~~h----~~~v~~~~~~~-~~~~l~s~s~-----------------d~~i~iwd~~~~~~~~~ 176 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQAH----VSEITKLKFFP-SGEALISSSQ-----------------DMQLKIWSVKDGSNPRT 176 (420)
T ss_dssp SCEEEECTTSCEEEEETTSS----SSCEEEEEECT-TSSEEEEEET-----------------TSEEEEEETTTCCCCEE
T ss_pred CCEEEEeCCCcceeeecccc----cCccEEEEECC-CCCEEEEEeC-----------------CCeEEEEeCCCCcCceE
Confidence 44999999887765543221 24578999999 5776654432 46788888876554 33
Q ss_pred eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
+.........++++++++.++.+ ..++.|..|++..
T Consensus 177 ~~~h~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 177 LIGHRATVTDIAIIDRGRNVLSA-SLDGTIRLWECGT 212 (420)
T ss_dssp EECCSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTT
T ss_pred EcCCCCcEEEEEEcCCCCEEEEE-cCCCcEEEeECCC
Confidence 44444567889999999866644 5678899999865
No 163
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.83 E-value=5.4e-07 Score=85.50 Aligned_cols=199 Identities=13% Similarity=0.103 Sum_probs=125.1
Q ss_pred CCCeeEEE-ecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE-e-CCCCeEEEEe-------
Q 019290 45 NGEGPYVG-VSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF-N-PVTCDLYIAD------- 114 (343)
Q Consensus 45 ~g~~l~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~-~-~~~~~l~v~~------- 114 (343)
||+.+|+. ..+++|-++|..+.+...+.. .+....|+|+++ . ++.+.+|+++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~------------------ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~ 161 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILE------------------IPNAKGIHGLRPQKWPRSNYVFCNGEDETPLV 161 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEE------------------CSSCCSEEEEEECCSSBCSEEEEEECSCEESS
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEe------------------CCCCCCCcceeeeecCCCcEEEEecccccccC
Confidence 78888865 457799999999876554431 122335899998 3 6577888884
Q ss_pred ----------CCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCccccc---------------c
Q 019290 115 ----------AYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQR---------------R 168 (343)
Q Consensus 115 ----------~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~---------------~ 168 (343)
...+ +..+|.++.++...... + ..+..+++++.++.+|++........ .
T Consensus 162 ~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V--g---g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~ 236 (595)
T 1fwx_A 162 NDGTNMEDVANYVNVFTAVDADKWEVAWQVLV--S---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVF 236 (595)
T ss_dssp CSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE--S---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEE
T ss_pred CCCcccccccccCceEEEEECCCCeEEEEEEe--C---CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEe
Confidence 1223 77899998766543222 1 13678899985345777664331110 0
Q ss_pred cceee---eeecC--CCceEEEEeCCC--Cce-EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCcc-----c
Q 019290 169 QYFMS---IATGD--RSGRLLKYDPLK--KNV-TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGER-----T 235 (343)
Q Consensus 169 ~~~~~---~~~~~--~~~~v~~~d~~~--~~~-~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~-----~ 235 (343)
++... +..+. .-++|..+|..+ ++. .....-...|.++.++|||+++|+++...+.|.+++..... +
T Consensus 237 ~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~ 316 (595)
T 1fwx_A 237 NIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN 316 (595)
T ss_dssp EHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC
T ss_pred eccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccc
Confidence 01000 00000 014588899886 433 33344446799999999999999999999999999987421 0
Q ss_pred c-ccceeeec--CCCCCCceeeCCCCCEEEEecc
Q 019290 236 T-YTPQLFAE--MPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 236 ~-~~~~~~~~--~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
+ .+..+... ....|..+++|++|++|++..-
T Consensus 317 l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~l 350 (595)
T 1fwx_A 317 ADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFL 350 (595)
T ss_dssp CCGGGGEEECCBCCSCEEEEEECTTSEEEEEETT
T ss_pred cCcccceEEEcCCCCCcceEEECCCCeEEEEEec
Confidence 0 01112222 2234888999999999998766
No 164
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.82 E-value=2.1e-06 Score=78.57 Aligned_cols=232 Identities=13% Similarity=0.091 Sum_probs=135.3
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCe
Q 019290 39 SLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFG 118 (343)
Q Consensus 39 ~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~g 118 (343)
..++.++|+.+.++..++.|..||..+++..... ......+..+++++++..|+.+.....
T Consensus 102 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------------------~~h~~~v~~~~~~~~~~~l~s~s~d~~ 162 (420)
T 3vl1_A 102 VDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID-------------------QAHVSEITKLKFFPSGEALISSSQDMQ 162 (420)
T ss_dssp EEEECSSSCEEEEEETTSCEEEECTTSCEEEEET-------------------TSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEecCCCEEEEEECCCCEEEEeCCCcceeeec-------------------ccccCccEEEEECCCCCEEEEEeCCCe
Confidence 3467889998888889999999998776543321 122345678999984445666644345
Q ss_pred EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeec
Q 019290 119 LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYN 198 (343)
Q Consensus 119 i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 198 (343)
|..+|.++++........ ...+..+++.+ ++.+.++... .+.|..||..+++......
T Consensus 163 i~iwd~~~~~~~~~~~~h----~~~v~~~~~~~-~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 163 LKIWSVKDGSNPRTLIGH----RATVTDIAIID-RGRNVLSASL-----------------DGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp EEEEETTTCCCCEEEECC----SSCEEEEEEET-TTTEEEEEET-----------------TSCEEEEETTTTEEEEEEC
T ss_pred EEEEeCCCCcCceEEcCC----CCcEEEEEEcC-CCCEEEEEcC-----------------CCcEEEeECCCCceeEEee
Confidence 999999876533222211 23578899999 4776654432 3557777776665433221
Q ss_pred C-------------------------CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCce
Q 019290 199 G-------------------------LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNI 252 (343)
Q Consensus 199 ~-------------------------~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i 252 (343)
. ......++++++++.++. ...++.|..|++..... ...+.. .......+
T Consensus 221 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~ 296 (420)
T 3vl1_A 221 RKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA-GHVSGVITVHNVFSKEQ---TIQLPSKFTCSCNSL 296 (420)
T ss_dssp BTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE-EETTSCEEEEETTTCCE---EEEECCTTSSCEEEE
T ss_pred cCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE-EcCCCeEEEEECCCCce---eEEcccccCCCceeE
Confidence 1 122344566788876554 45678999999865221 111111 12224457
Q ss_pred eeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CC-EEEEeeCCCCCccCCceeEEEeCCEEE
Q 019290 253 KSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GN-VVDVLDGNEGNTLNSVSEVQEYGEYLY 329 (343)
Q Consensus 253 ~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~ 329 (343)
+++++|. +.++... .+.|..+|.+ ++ .+..+....+ ..+..+...+++++
T Consensus 297 ~~~~~~~~~l~~g~~------------------------dg~i~vwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~l 349 (420)
T 3vl1_A 297 TVDGNNANYIYAGYE------------------------NGMLAQWDLRSPECPVGEFLINEG---TPINNVYFAAGALF 349 (420)
T ss_dssp EECSSCTTEEEEEET------------------------TSEEEEEETTCTTSCSEEEEESTT---SCEEEEEEETTEEE
T ss_pred EEeCCCCCEEEEEeC------------------------CCeEEEEEcCCCcCchhhhhccCC---CCceEEEeCCCCEE
Confidence 7889887 5555444 3467777763 33 2333332111 23444444466766
Q ss_pred EecCCCCeEEEEc
Q 019290 330 TGSSVQPYVVVIK 342 (343)
Q Consensus 330 i~~~~~~~i~~~~ 342 (343)
++......|.+++
T Consensus 350 ~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 350 VSSGFDTSIKLDI 362 (420)
T ss_dssp EEETTTEEEEEEE
T ss_pred EEecCCccEEEEe
Confidence 6666666666554
No 165
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.82 E-value=9.2e-07 Score=80.60 Aligned_cols=199 Identities=9% Similarity=-0.007 Sum_probs=117.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++++.++++..++.|..||..+++................ ..........+..+.+.+ ++.++++..
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 225 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN----AENHSGDGSLGVDVEWVD-DDKFVIPGP 225 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------------------CCCBSCCEEEE-TTEEEEECG
T ss_pred cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee----eccccCCcceeeEEEEcC-CCEEEEEcC
Confidence 467899999999888888899999999877653322111100000000 000000111156778887 677777754
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE-
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT- 194 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 194 (343)
...|..+|.++++........ ...+..+++.+ ++.++++... .+.|..||..+++..
T Consensus 226 ~g~i~~~d~~~~~~~~~~~~~----~~~i~~~~~~~-~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~ 283 (425)
T 1r5m_A 226 KGAIFVYQITEKTPTGKLIGH----HGPISVLEFND-TNKLLLSASD-----------------DGTLRIWHGGNGNSQN 283 (425)
T ss_dssp GGCEEEEETTCSSCSEEECCC----SSCEEEEEEET-TTTEEEEEET-----------------TSCEEEECSSSBSCSE
T ss_pred CCeEEEEEcCCCceeeeeccC----CCceEEEEECC-CCCEEEEEcC-----------------CCEEEEEECCCCccce
Confidence 444999999876533221111 13477899999 4765554332 456888887655543
Q ss_pred EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 195 VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 195 ~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.+.........+++++++ ++++...++.|..|++..... ...+.........++++++|++.++...
T Consensus 284 ~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 284 CFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTL---LALSIVDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp EECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEE---EEEEECTTCCEEEEEECTTSSEEEEEET
T ss_pred EecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcE---eEecccCCccEEEEEEcCCCCEEEEEEC
Confidence 333334556889999988 445556789999999865221 1122112223456778899987776554
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.82 E-value=1.1e-06 Score=79.66 Aligned_cols=200 Identities=10% Similarity=-0.001 Sum_probs=114.3
Q ss_pred EEEcCCCCeeEEEec-CC--EEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 40 LAFDCNGEGPYVGVS-DG--RILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 40 l~~d~~g~~l~~~~~-~g--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
.+++|||+.+.+... ++ .|+.+|..+++...+... ......+..+++++..|+++...
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-------------------~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-------------------RGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS-------------------SCBCSSSCEECTTSSEEEEEETT
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-------------------CCCCccceEEcCCCCEEEEEeCC
Confidence 678999996665544 45 599999988766554311 11111246788856678888655
Q ss_pred CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcc--ccc-ccce--eeeeecCCCceEEEEeCCCC
Q 019290 117 FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIY--FQR-RQYF--MSIATGDRSGRLLKYDPLKK 191 (343)
Q Consensus 117 ~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~--~~~-~~~~--~~~~~~~~~~~v~~~d~~~~ 191 (343)
..++.+|+++++.+.+....... ........++ ++++.++..... +.. .++. ...........|+++|..++
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~--~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 178 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEW--VGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG 178 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTE--EEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC
T ss_pred CeEEEEECCCCcceeeeechhhc--ccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC
Confidence 67999999998776654322110 1011223466 577665321100 000 0000 00011122467999999988
Q ss_pred ceEEeecCCCCcceeEEec-CCCEEEEEEcC-----CCeEEEEEccCccccccceeeecCC-C-CCCceeeCCCCC-EEE
Q 019290 192 NVTVMYNGLSFPNGVALSN-NNSFLLLAESA-----TLKILRFWLQGERTTYTPQLFAEMP-R-FPDNIKSDSKGE-FWI 262 (343)
Q Consensus 192 ~~~~~~~~~~~~~~i~~~~-d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~-~-~p~~i~~d~~G~-lwi 262 (343)
+.+.+.........++++| |++.+.++... ...|+.++.++ ...+.+.... + .....+.++||+ |..
T Consensus 179 ~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~----~~~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 179 ESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG----TNMRKVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp CEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS----CCCEESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred ceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC----CceEEeeeCCCCcccccceECCCCCEEEE
Confidence 8877665555567889999 99877665443 34899999776 2333332211 0 112356789986 544
Q ss_pred Eec
Q 019290 263 AMN 265 (343)
Q Consensus 263 ~~~ 265 (343)
...
T Consensus 255 ~~~ 257 (388)
T 3pe7_A 255 VSY 257 (388)
T ss_dssp EEE
T ss_pred Eec
Confidence 433
No 167
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.82 E-value=3.5e-06 Score=82.87 Aligned_cols=190 Identities=12% Similarity=0.079 Sum_probs=114.0
Q ss_pred CceEEEcCCCCeeEEEe---------------------------------cCCEEEEEEcCCCCeEEeeecCCCcccccc
Q 019290 37 PESLAFDCNGEGPYVGV---------------------------------SDGRILKWKAANSGWTEFATTAPHRAREIC 83 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~---------------------------------~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (343)
+.+++++|||+.+++.. ....|+.+|..+++...+...
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~--------- 253 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG--------- 253 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC---------
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC---------
Confidence 58999999999766554 335788888877654433210
Q ss_pred CCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCC-----eEEEEeCCCC-eEEEcccccCCCCccCcceeEEeC--CCCe
Q 019290 84 DGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYF-----GLMVVGPNGG-QAQQLASSAGGIPFRFTNDLDIDP--NTGI 155 (343)
Q Consensus 84 ~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~-----gi~~~d~~~~-~~~~~~~~~~~~~~~~~~~i~~d~--~dg~ 155 (343)
......+..+++++++..|+++.... .|+.+|.+++ ..+.+...........+..+++.+ + |+
T Consensus 254 --------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~d-g~ 324 (706)
T 2z3z_A 254 --------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSN-NQ 324 (706)
T ss_dssp --------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCS-SE
T ss_pred --------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCC-CE
Confidence 01122356788998455577754322 5899999988 555543221111111246678887 5 66
Q ss_pred EEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCcce-eEEecCCCEEEEEEcCCC----eEEEEEc
Q 019290 156 VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNG-VALSNNNSFLLLAESATL----KILRFWL 230 (343)
Q Consensus 156 l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-i~~~~d~~~lyv~~~~~~----~i~~~~~ 230 (343)
++++... .+...||.++..++..+.+..+...... ++++++++.+|++....+ .|++++.
T Consensus 325 ~l~~~~~---------------~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 325 FIWQSRR---------------DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp EEEEECT---------------TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred EEEEEcc---------------CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 5443322 1145799998766666555433333334 789999999998876654 8888887
Q ss_pred cCccccccceeeecCCCCCCceeeCCCCCEEEEe
Q 019290 231 QGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAM 264 (343)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~ 264 (343)
++ +..+.+....+ ...++++++|+.++..
T Consensus 390 ~~----~~~~~l~~~~~-~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 390 KG----GKTKDLTPESG-MHRTQLSPDGSAIIDI 418 (706)
T ss_dssp TC----CCCEESCCSSS-EEEEEECTTSSEEEEE
T ss_pred CC----CCceeccCCCc-eEEEEECCCCCEEEEE
Confidence 65 22233322121 3346778888765543
No 168
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.81 E-value=3.9e-06 Score=75.25 Aligned_cols=193 Identities=11% Similarity=0.071 Sum_probs=113.0
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC--CCeEEEE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV--TCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~~~l~v~ 113 (343)
...+++++++|+.+.++..++.|..|+..+......... ......+..+++.++ +..|+.+
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----------------~~h~~~v~~~~~~~~~~~~~l~s~ 75 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-----------------TGHEGPVWRVDWAHPKFGTILASC 75 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE-----------------CCCSSCEEEEEECCGGGCSEEEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEe-----------------cCCCCcEEEEEeCCCCCCCEEEEe
Confidence 467899999999888888899999998764333222110 122234678888763 3455555
Q ss_pred eCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCC--CeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCC
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNT--GIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKK 191 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~d--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 191 (343)
.....|..+|.++++......... ....+..+++.+ + +.+.++... .+.|..||..++
T Consensus 76 ~~dg~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~-~~~~~~l~~~~~-----------------d~~i~v~d~~~~ 135 (379)
T 3jrp_A 76 SYDGKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAP-HEYGPLLLVASS-----------------DGKVSVVEFKEN 135 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECC-GGGCSEEEEEET-----------------TSEEEEEECCTT
T ss_pred ccCCEEEEEEcCCCceeEeeeecC--CCcceEEEEeCC-CCCCCEEEEecC-----------------CCcEEEEecCCC
Confidence 433348899988876433322211 123578889988 4 555443322 456778887655
Q ss_pred c---eEEeecCCCCcceeEEec-------------CCCEEEEEEcCCCeEEEEEccCccccccc-eeeecCCCCCCceee
Q 019290 192 N---VTVMYNGLSFPNGVALSN-------------NNSFLLLAESATLKILRFWLQGERTTYTP-QLFAEMPRFPDNIKS 254 (343)
Q Consensus 192 ~---~~~~~~~~~~~~~i~~~~-------------d~~~lyv~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~p~~i~~ 254 (343)
. ...+.........+++++ ++..++ +...++.|..|++......... ..+.........+++
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEE-EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEE-EEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 2 222333445567888888 566554 4456789999998753210111 111111222345778
Q ss_pred CCC---CCEEEEecc
Q 019290 255 DSK---GEFWIAMNS 266 (343)
Q Consensus 255 d~~---G~lwi~~~~ 266 (343)
+++ |++.++...
T Consensus 215 sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQ 229 (379)
T ss_dssp CCCCSSSEEEEEEET
T ss_pred CCCCCCCCeEEEEeC
Confidence 888 766666554
No 169
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.81 E-value=6.2e-06 Score=82.21 Aligned_cols=186 Identities=11% Similarity=0.049 Sum_probs=117.3
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+++++|+|..+.++..+|.|..||..++....... .....+..+++++++..|.++..
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~-------------------~~~~~v~~~~~s~~~~~l~~~~~ 75 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ-------------------VTETPVRAGKFIARKNWIIVGSD 75 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-------------------CCSSCEEEEEEEGGGTEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe-------------------cCCCcEEEEEEeCCCCEEEEEeC
Confidence 57899999999988888889999999987754332211 12234678999995556777754
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCC-ceE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKK-NVT 194 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~~~ 194 (343)
...|..+|.++++........ ...+..+++.+ ++...++... .+.|..||..++ ...
T Consensus 76 dg~i~vw~~~~~~~~~~~~~~----~~~v~~~~~s~-~~~~l~~~~~-----------------dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 76 DFRIRVFNYNTGEKVVDFEAH----PDYIRSIAVHP-TKPYVLSGSD-----------------DLTVKLWNWENNWALE 133 (814)
T ss_dssp TSEEEEEETTTCCEEEEEECC----SSCEEEEEECS-SSSEEEEEET-----------------TSEEEEEEGGGTSEEE
T ss_pred CCeEEEEECCCCcEEEEEecC----CCCEEEEEEeC-CCCEEEEEcC-----------------CCEEEEEECCCCceEE
Confidence 445999999887654332221 13478899999 4765443322 456777887654 332
Q ss_pred -EeecCCCCcceeEEec-CCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCC--CCCEEEEecc
Q 019290 195 -VMYNGLSFPNGVALSN-NNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDS--KGEFWIAMNS 266 (343)
Q Consensus 195 -~~~~~~~~~~~i~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~--~G~lwi~~~~ 266 (343)
.+.........++++| ++. ++++...++.|..|++..... ...+.. .......++..+ +|.+.++...
T Consensus 134 ~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 134 QTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTP---NFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp EEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCSSC---SEEEECCCTTCCCEEEECCSTTCCEEEEECT
T ss_pred EEEcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcc---eeEEecCCCCCEEEEEEEECCCCCEEEEEeC
Confidence 2333344568889998 555 445556688999999865321 112211 112244566666 7876666554
No 170
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.81 E-value=4.8e-07 Score=81.69 Aligned_cols=189 Identities=8% Similarity=0.015 Sum_probs=117.8
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||.++++..... ......+..+++.+.++.++++..
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~-------------------~~h~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY-------------------NAHSSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE-------------------CCCSSCEEEEEECTTCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-------------------cCCCCCEEEEEEccCCCceeeeec
Confidence 3568999999998888889999999999876543221 112234678888874444554434
Q ss_pred CCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 116 YFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 116 ~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
.+| |..+|.++++........ .....+..+++.|.++.++++... .+.|..||..+++..
T Consensus 202 ~dg~v~~wd~~~~~~~~~~~~~--~~~~~v~~v~~sp~~~~~la~g~~-----------------d~~i~~wd~~~~~~~ 262 (357)
T 4g56_B 202 EDGRILLWDTRKPKPATRIDFC--ASDTIPTSVTWHPEKDDTFACGDE-----------------TGNVSLVNIKNPDSA 262 (357)
T ss_dssp TTSCEEECCTTSSSCBCBCCCT--TCCSCEEEEEECTTSTTEEEEEES-----------------SSCEEEEESSCGGGC
T ss_pred cCCceEEEECCCCceeeeeeec--cccccccchhhhhcccceEEEeec-----------------ccceeEEECCCCcEe
Confidence 444 888998876543222111 112346788888843455543222 456888888766543
Q ss_pred -EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCC-CCCEEEEecc
Q 019290 195 -VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDS-KGEFWIAMNS 266 (343)
Q Consensus 195 -~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~lwi~~~~ 266 (343)
.+.........++++++++.+.++...++.|..|++... +......-.+....+++.| +|+++++...
T Consensus 263 ~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~----~~~~~~~H~~~V~~vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS----EVFRDLSHRDFVTGVAWSPLDHSKFTTVGW 332 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC----EEEEECCCSSCEEEEEECSSSTTEEEEEET
T ss_pred EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC----cEeEECCCCCCEEEEEEeCCCCCEEEEEcC
Confidence 333333456889999988766666667889999997652 2111111122244577886 7877776544
No 171
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.81 E-value=5.2e-06 Score=76.28 Aligned_cols=234 Identities=12% Similarity=0.078 Sum_probs=141.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+++++++|+.+.++..++.|..||..+.+..... ......+..+.++++++.|..+..
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~-------------------~~h~~~V~~v~~~p~~~~l~s~s~ 212 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-------------------HGHDHNVSSVSIMPNGDHIVSASR 212 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC-------------------CCCSSCEEEEEECSSSSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE-------------------cCCCCCEEEEEEeCCCCEEEEEeC
Confidence 4678999999998888899999999998775432211 122234678999984445555544
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...|..+|.++++........ ...+..+.+.+ ++.++++... .+.|..||..+++...
T Consensus 213 D~~i~~wd~~~~~~~~~~~~h----~~~v~~~~~~~-~g~~l~s~s~-----------------D~~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 213 DKTIKMWEVQTGYCVKTFTGH----REWVRMVRPNQ-DGTLIASCSN-----------------DQTVRVWVVATKECKA 270 (410)
T ss_dssp TSEEEEEETTTCCEEEEEECC----SSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEEEEEeCC----CccEEEEEECC-CCCEEEEEcC-----------------CCeEEEEECCCCceee
Confidence 344899999887643322211 13467788888 5887765433 4567778877665443
Q ss_pred -eecCCCCcceeEEecC--------------------CCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceee
Q 019290 196 -MYNGLSFPNGVALSNN--------------------NSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKS 254 (343)
Q Consensus 196 -~~~~~~~~~~i~~~~d--------------------~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 254 (343)
+.........++++|+ +. +.++...++.|..|++..... ...+....+....+++
T Consensus 271 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~~---~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 271 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGMC---LMTLVGHDNWVRGVLF 346 (410)
T ss_dssp EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTTEE---EEEEECCSSCEEEEEE
T ss_pred EecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCce---EEEEECCCCcEEEEEE
Confidence 2233344567777765 33 455666789999999865211 1222212222446788
Q ss_pred CCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEec
Q 019290 255 DSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGS 332 (343)
Q Consensus 255 d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~ 332 (343)
+++|++.++... .+.|..+|. .++....+.... ..+..+... ++.+.++.
T Consensus 347 ~~~g~~l~s~s~------------------------D~~i~vwd~~~~~~~~~~~~h~----~~v~~l~~~~~~~~l~sg 398 (410)
T 1vyh_C 347 HSGGKFILSCAD------------------------DKTLRVWDYKNKRCMKTLNAHE----HFVTSLDFHKTAPYVVTG 398 (410)
T ss_dssp CSSSSCEEEEET------------------------TTEEEEECCTTSCCCEEEECCS----SCEEEEEECSSSSCEEEE
T ss_pred cCCCCEEEEEeC------------------------CCeEEEEECCCCceEEEEcCCC----CcEEEEEEcCCCCEEEEE
Confidence 999976666554 346777776 355444443222 235555443 45555555
Q ss_pred CCCCeEEEEc
Q 019290 333 SVQPYVVVIK 342 (343)
Q Consensus 333 ~~~~~i~~~~ 342 (343)
.....|.+++
T Consensus 399 s~D~~i~vW~ 408 (410)
T 1vyh_C 399 SVDQTVKVWE 408 (410)
T ss_dssp ETTSEEEEEC
T ss_pred eCCCcEEEEe
Confidence 5555665554
No 172
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.81 E-value=4.3e-06 Score=80.27 Aligned_cols=242 Identities=12% Similarity=0.065 Sum_probs=139.8
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCC----Ce-EEeeecCCCccccccCCCCCcccCCCcCC-eeeEEEeC--CC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANS----GW-TEFATTAPHRAREICDGSTNTTLEPLCGR-PLGIKFNP--VT 107 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~gi~~~~--~~ 107 (343)
.+.+++++++|+.+.++. ++.|..|+..++ +. ..+. ..... +..+++++ ++
T Consensus 20 ~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~--------------------~h~~~~v~~~~~sp~~~~ 78 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFT--------------------GHGSSVVTTVKFSPIKGS 78 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEEC--------------------TTTTSCEEEEEECSSTTC
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEe--------------------cCCCceEEEEEECcCCCC
Confidence 588999999999666655 788999998765 32 2221 22334 67899998 67
Q ss_pred CeEEEEeCCCeEEEEeCCCC------eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCc
Q 019290 108 CDLYIADAYFGLMVVGPNGG------QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSG 181 (343)
Q Consensus 108 ~~l~v~~~~~gi~~~d~~~~------~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
..|..+.....|..+|.+++ +.+...... . ....+..+++.+ +++..++.... ....+
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~s~-~~~~l~~~~~~-------------~~~~~ 142 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ-V-LAGPISDISWDF-EGRRLCVVGEG-------------RDNFG 142 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE-C-CSSCEEEEEECT-TSSEEEEEECC-------------SSCSE
T ss_pred CEEEEecCCCEEEEEeCCCCcccccccccccchhh-c-ccccEEEEEEeC-CCCEEEEeccC-------------CCCcc
Confidence 77777754445888888644 222221111 1 123578899999 47655543220 01125
Q ss_pred eEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCC---CCCceeeCCC-
Q 019290 182 RLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPR---FPDNIKSDSK- 257 (343)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~p~~i~~d~~- 257 (343)
.|+.+|. ......+.........++++++++.++++...++.|..|++..... ...+..... ....++++++
T Consensus 143 ~v~~~d~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 143 VFISWDS-GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF---SASDRTHHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp EEEETTT-CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE---EEEECSSSCTTCCEEEEEECSTT
T ss_pred EEEEEEC-CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcce---eeeecccCCCCceEEEEEECCCC
Confidence 6888873 2334444444456788999999885566666789999999764211 112211111 2345778898
Q ss_pred CCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCC
Q 019290 258 GEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQP 336 (343)
Q Consensus 258 G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~ 336 (343)
|++.++... .+.|..+|. +++....+..+.......+..+...+++++++.....
T Consensus 219 ~~~l~~~~~------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~ 274 (615)
T 1pgu_A 219 GEFVITVGS------------------------DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADA 274 (615)
T ss_dssp CCEEEEEET------------------------TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTS
T ss_pred CCEEEEEeC------------------------CCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCC
Confidence 887666544 246777775 5666666521000012233333332444444444445
Q ss_pred eEEEEc
Q 019290 337 YVVVIK 342 (343)
Q Consensus 337 ~i~~~~ 342 (343)
.|.+++
T Consensus 275 ~i~~wd 280 (615)
T 1pgu_A 275 TIRVWD 280 (615)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 565554
No 173
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.80 E-value=1.3e-07 Score=88.39 Aligned_cols=169 Identities=12% Similarity=0.206 Sum_probs=101.8
Q ss_pred cCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee---c------CCCCcceeEEecC-
Q 019290 142 RFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY---N------GLSFPNGVALSNN- 211 (343)
Q Consensus 142 ~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~---~------~~~~~~~i~~~~d- 211 (343)
..+.+|++++ +|+|||++.. .++|++++..+++...+. . +...+.+++++|+
T Consensus 27 ~~P~~~a~~p-dG~l~V~e~~-----------------gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf 88 (454)
T 1cru_A 27 NKPHALLWGP-DNQIWLTERA-----------------TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDF 88 (454)
T ss_dssp SSEEEEEECT-TSCEEEEETT-----------------TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTT
T ss_pred CCceEEEEcC-CCcEEEEEcC-----------------CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCc
Confidence 4678999999 6999998864 346999987656554332 1 1233459999997
Q ss_pred --CCEEEEEEcC------------CCeEEEEEccCc-cccccceeeec-CC----CCCCceeeCCCCCEEEEeccCCCcc
Q 019290 212 --NSFLLLAESA------------TLKILRFWLQGE-RTTYTPQLFAE-MP----RFPDNIKSDSKGEFWIAMNSARGKI 271 (343)
Q Consensus 212 --~~~lyv~~~~------------~~~i~~~~~~~~-~~~~~~~~~~~-~~----~~p~~i~~d~~G~lwi~~~~~~~~~ 271 (343)
++.||++.+. ..+|++++++.. ..+...+.+.. .+ ..+.+|++++||+||++....+...
T Consensus 89 ~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~ 168 (454)
T 1cru_A 89 KNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQ 168 (454)
T ss_dssp TTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTS
T ss_pred CcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCC
Confidence 7789998763 358999987642 11122233322 21 2356799999999999976522210
Q ss_pred cccccccc-ccc--cCCC-------c--ccCCCeEEEECCCCC-----------EEEEeeCCCCCccCCceeEEEe-CCE
Q 019290 272 ESNKKTAF-CEE--TAKP-------W--FLRDPVGVKFDVNGN-----------VVDVLDGNEGNTLNSVSEVQEY-GEY 327 (343)
Q Consensus 272 ~~~~~~~~-~~~--~~~~-------~--~~~~~~v~~~d~~g~-----------~~~~~~~~~~~~~~~~~~~~~~-~g~ 327 (343)
. .+. ... ...| . ....+.|+|++++|+ ..++++. + ...+..+..+ .|+
T Consensus 169 ~----~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~--G--~RNp~gla~dp~G~ 240 (454)
T 1cru_A 169 L----AYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL--G--HRNPQGLAFTPNGK 240 (454)
T ss_dssp G----GGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB--C--CSEEEEEEECTTSC
T ss_pred c----cccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE--C--CCCcceEEECCCCC
Confidence 0 000 000 0000 0 012578999999987 2333432 1 2234444444 789
Q ss_pred EEEecCCCC
Q 019290 328 LYTGSSVQP 336 (343)
Q Consensus 328 l~i~~~~~~ 336 (343)
||++....+
T Consensus 241 L~~~d~g~~ 249 (454)
T 1cru_A 241 LLQSEQGPN 249 (454)
T ss_dssp EEEEEECSS
T ss_pred EEEEecCCC
Confidence 999987654
No 174
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.80 E-value=2.2e-06 Score=79.27 Aligned_cols=202 Identities=9% Similarity=0.045 Sum_probs=115.9
Q ss_pred CCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
.+.++++.++ +++++++..+|.|..|+..+.....-. ... .............+.++++++.+..++++.
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~-~~~--------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEP-SGE--------CQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCT-TCC--------CCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCc-ccc--------CCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 6889999997 666778888999999987541000000 000 000000011223467899998444244443
Q ss_pred CCCe-EEEEeCCCCeE----EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC
Q 019290 115 AYFG-LMVVGPNGGQA----QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL 189 (343)
Q Consensus 115 ~~~g-i~~~d~~~~~~----~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 189 (343)
...| |..++..++.. ......... ....++++++.+.++.++++... .+.|..||..
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~-----------------dg~i~i~d~~ 262 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVAD-----------------DQKLMIWDTR 262 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEETT
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeC-----------------CCeEEEEECC
Confidence 4455 88999876321 100011111 12457889998843566665433 5678888887
Q ss_pred CCc----eEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EEEEe
Q 019290 190 KKN----VTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FWIAM 264 (343)
Q Consensus 190 ~~~----~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lwi~~ 264 (343)
++. ...+......++.++++++++.++++....+.|..|++..... ....+....+....+++.++|. ++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEECCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--CeEEeecCCCCEEEEEECCCCCCEEEEE
Confidence 542 2233344456789999999987787777889999999864221 1222222222244577888884 55555
Q ss_pred cc
Q 019290 265 NS 266 (343)
Q Consensus 265 ~~ 266 (343)
..
T Consensus 341 ~~ 342 (430)
T 2xyi_A 341 GT 342 (430)
T ss_dssp ET
T ss_pred eC
Confidence 44
No 175
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.78 E-value=7.7e-06 Score=73.82 Aligned_cols=203 Identities=13% Similarity=0.093 Sum_probs=126.2
Q ss_pred CCCCCceEEEcCCCCeeEEEec---------------CCEEEEEEcCCC--C-eEEeeecCCCccccccCCCCCcccCCC
Q 019290 33 GVVGPESLAFDCNGEGPYVGVS---------------DGRILKWKAANS--G-WTEFATTAPHRAREICDGSTNTTLEPL 94 (343)
Q Consensus 33 ~~~~p~~l~~d~~g~~l~~~~~---------------~g~i~~~d~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (343)
++.++.++.+|+.|++|+.++. ..+|+.||..+. + +..|...... ...
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~--------------~~~ 150 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRL--------------VEK 150 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGG--------------CCC
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHh--------------ccc
Confidence 5678999999999984435432 126999999886 4 3344321111 111
Q ss_pred cCCeeeEEEe-CC------CCeEEEEeCC-CeEEEEeCCCCeEEEcccc---cC--------CCC---ccCcceeEEeCC
Q 019290 95 CGRPLGIKFN-PV------TCDLYIADAY-FGLMVVGPNGGQAQQLASS---AG--------GIP---FRFTNDLDIDPN 152 (343)
Q Consensus 95 ~~~p~gi~~~-~~------~~~l~v~~~~-~gi~~~d~~~~~~~~~~~~---~~--------~~~---~~~~~~i~~d~~ 152 (343)
....+.+.++ .+ ++.+||+|.. .||.++|.++++..++... .+ +.+ ...+.+|++++.
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 2345678888 21 4579999964 5799999998876555321 11 111 135778888873
Q ss_pred ----CCeEEEEeCCcccccccceeeeeecCCCceEEEEeC------C-CCceEEeecCC--CCcceeEEecCCCEEEEEE
Q 019290 153 ----TGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP------L-KKNVTVMYNGL--SFPNGVALSNNNSFLLLAE 219 (343)
Q Consensus 153 ----dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~------~-~~~~~~~~~~~--~~~~~i~~~~d~~~lyv~~ 219 (343)
+..||+.-.+ +..+|++.. . ...++.+-... ....++++++..+.||++.
T Consensus 231 ~~~~~~~LYf~pls-----------------s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~ 293 (381)
T 3q6k_A 231 DSEGNRPAYYLAGS-----------------AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAE 293 (381)
T ss_dssp CTTSCCEEEEEESS-----------------CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEE
T ss_pred cCCCCeEEEEEECC-----------------CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEe
Confidence 2468886654 335666641 1 12333332222 1223566764455799999
Q ss_pred cCCCeEEEEEccC-ccccccceeeecCC--CCCCceeeCCCCCEEEEecc
Q 019290 220 SATLKILRFWLQG-ERTTYTPQLFAEMP--RFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 220 ~~~~~i~~~~~~~-~~~~~~~~~~~~~~--~~p~~i~~d~~G~lwi~~~~ 266 (343)
...+.|.+|+.++ +-...+..++...+ .+|+++.+|.+|.||+.++.
T Consensus 294 ~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 294 ANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp SSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred ccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 9999999999876 32213445555432 36899999999999999875
No 176
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.78 E-value=4.1e-06 Score=75.04 Aligned_cols=191 Identities=8% Similarity=0.006 Sum_probs=114.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.++++..++.|..||..+++....... ......+..+.+++++..|+++..
T Consensus 54 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----------------~~~~~~v~~~~~~~~~~~l~~~~~ 116 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI-----------------LRINRAARCVRWAPNEKKFAVGSG 116 (372)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEEC-----------------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred cccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEe-----------------ecCCCceeEEEECCCCCEEEEEeC
Confidence 467999999999888888899999999877653322110 112234678999985556666654
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC------
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL------ 189 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~------ 189 (343)
...+..+|.++++...............+..+++.+ ++.++++... .+.|..||..
T Consensus 117 d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~ 178 (372)
T 1k8k_C 117 SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAGSC-----------------DFKCRIFSAYIKEVEE 178 (372)
T ss_dssp TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEECCCTTTSC
T ss_pred CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-CCCEEEEEcC-----------------CCCEEEEEcccccccc
Confidence 344777777655411110111111124578899999 4766654332 4567777732
Q ss_pred ------------CCceE-EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCC
Q 019290 190 ------------KKNVT-VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDS 256 (343)
Q Consensus 190 ------------~~~~~-~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~ 256 (343)
.++.. .+.........+++++++..++.+ ..++.|..|++..... ...+.........+++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~ 254 (372)
T 1k8k_C 179 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV-SHDSTVCLADADKKMA---VATLASETLPLLAVTFIT 254 (372)
T ss_dssp CCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE-ETTTEEEEEEGGGTTE---EEEEECSSCCEEEEEEEE
T ss_pred cccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE-eCCCEEEEEECCCCce---eEEEccCCCCeEEEEEec
Confidence 23332 232333457889999999866655 4678999999864221 122221222234577888
Q ss_pred CCCEEEEec
Q 019290 257 KGEFWIAMN 265 (343)
Q Consensus 257 ~G~lwi~~~ 265 (343)
+|++.++..
T Consensus 255 ~~~~l~~~~ 263 (372)
T 1k8k_C 255 ESSLVAAGH 263 (372)
T ss_dssp TTEEEEEET
T ss_pred CCCEEEEEe
Confidence 888777663
No 177
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.77 E-value=5.9e-06 Score=73.97 Aligned_cols=192 Identities=13% Similarity=0.038 Sum_probs=113.4
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
...+++.++|+.+.++..++.|..||..++........ .......+..+++++++..|..+...
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~----------------~~~h~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVL----------------SEGHQRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEE----------------CSSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeee----------------ccccCCcEEEEEECCCCCEEEEEECC
Confidence 46899999999888888999999998876543211100 01122346789999844455555433
Q ss_pred CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce---
Q 019290 117 FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV--- 193 (343)
Q Consensus 117 ~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~--- 193 (343)
..+..++.+++..+.+... .+ ....+..+++.+ ++++.++... .+.|..+|..++..
T Consensus 83 ~~v~iw~~~~~~~~~~~~~-~~-h~~~v~~v~~sp-~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~ 142 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTL-EG-HENEVKSVAWAP-SGNLLATCSR-----------------DKSVWVWEVDEEDEYEC 142 (345)
T ss_dssp SCEEEEEECCC-EEEEEEE-CC-CSSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEEECTTSCEEE
T ss_pred CcEEEEEccCCCeEEEEEc-cC-CCCCceEEEEeC-CCCEEEEEEC-----------------CCeEEEEECCCCCCeEE
Confidence 4477788776654332211 11 124578899999 5877765433 34566666544321
Q ss_pred -EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 194 -TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 194 -~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
..+.........++++|+++.+.. ...++.|..|+...... .....+.........++++++|++.++...
T Consensus 143 ~~~~~~h~~~v~~~~~~p~~~~l~s-~s~d~~i~~w~~~~~~~-~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 143 VSVLNSHTQDVKHVVWHPSQELLAS-ASYDDTVKLYREEEDDW-VCCATLEGHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp EEEECCCCSCEEEEEECSSSSCEEE-EETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEecCcCCCeEEEEECCCCCEEEE-EeCCCcEEEEEecCCCE-EEEEEecCCCCceEEEEECCCCCEEEEEeC
Confidence 122233345678899999886554 45678899998765211 111111111222345778899887766554
No 178
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.76 E-value=1.6e-05 Score=71.89 Aligned_cols=178 Identities=12% Similarity=0.050 Sum_probs=103.3
Q ss_pred CCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCC------cc-CcceeEEeCCCCeEEEEeCCcccccccceeeeeecCC
Q 019290 107 TCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIP------FR-FTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 107 ~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~------~~-~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
++.+|++....+++.+|+++|+............ .. .....+++ ++.+|++..
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~~------------------ 247 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--NGVVFALAY------------------ 247 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE--TTEEEEECT------------------
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--CCEEEEEec------------------
Confidence 5789998544569999999888765432211000 00 11122333 378998653
Q ss_pred CceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CC-CCCCceeeCCC
Q 019290 180 SGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MP-RFPDNIKSDSK 257 (343)
Q Consensus 180 ~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~-~~p~~i~~d~~ 257 (343)
.+.++.+|..+++..... .......+.+ +++.+|+... .+.|+.++..+ ++..-... .. ......++. +
T Consensus 248 ~g~l~~~d~~tG~~~w~~-~~~~~~~~~~--~~~~l~~~~~-~g~l~~~d~~t----G~~~w~~~~~~~~~~~~~~~~-~ 318 (376)
T 3q7m_A 248 NGNLTALDLRSGQIMWKR-ELGSVNDFIV--DGNRIYLVDQ-NDRVMALTIDG----GVTLWTQSDLLHRLLTSPVLY-N 318 (376)
T ss_dssp TSCEEEEETTTCCEEEEE-CCCCEEEEEE--ETTEEEEEET-TCCEEEEETTT----CCEEEEECTTTTSCCCCCEEE-T
T ss_pred CcEEEEEECCCCcEEeec-cCCCCCCceE--ECCEEEEEcC-CCeEEEEECCC----CcEEEeecccCCCcccCCEEE-C
Confidence 457999999888764322 2223344444 3567888764 67899999765 22211111 11 112223332 5
Q ss_pred CCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCC
Q 019290 258 GEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQP 336 (343)
Q Consensus 258 G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~ 336 (343)
|.||+++.. +.|+++|+ +|+.+.....+... ........+++||+++.. .
T Consensus 319 ~~l~v~~~~-------------------------g~l~~~d~~tG~~~~~~~~~~~~---~~~~~~~~~~~l~v~~~~-G 369 (376)
T 3q7m_A 319 GNLVVGDSE-------------------------GYLHWINVEDGRFVAQQKVDSSG---FQTEPVAADGKLLIQAKD-G 369 (376)
T ss_dssp TEEEEECTT-------------------------SEEEEEETTTCCEEEEEECCTTC---BCSCCEEETTEEEEEBTT-S
T ss_pred CEEEEEeCC-------------------------CeEEEEECCCCcEEEEEecCCCc---ceeCCEEECCEEEEEeCC-C
Confidence 889999865 47899997 68877666543221 223334458999999875 4
Q ss_pred eEEEEc
Q 019290 337 YVVVIK 342 (343)
Q Consensus 337 ~i~~~~ 342 (343)
.+..++
T Consensus 370 ~l~~~~ 375 (376)
T 3q7m_A 370 TVYSIT 375 (376)
T ss_dssp CEEEEE
T ss_pred EEEEEe
Confidence 466665
No 179
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.75 E-value=5.7e-07 Score=81.15 Aligned_cols=158 Identities=11% Similarity=-0.001 Sum_probs=93.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||..++.+.... ........+..+++++++..|..+..
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~-----------------~~~~h~~~v~~~~~s~~~~~l~s~s~ 75 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR-----------------TFSDHDKIVTCVDWAPKSNRIVTCSQ 75 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC-----------------CBCCCSSCEEEEEECTTTCCEEEEET
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE-----------------EEecCCceEEEEEEeCCCCEEEEEeC
Confidence 4789999999997777778888999988765322221 11122335678999984445666643
Q ss_pred CCeEEEEeCCCCe-EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc--
Q 019290 116 YFGLMVVGPNGGQ-AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN-- 192 (343)
Q Consensus 116 ~~gi~~~d~~~~~-~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-- 192 (343)
...|..+|.++++ ....... .. ....+..+++.+ ++.+.++... .+.|..+|..+++
T Consensus 76 d~~v~vwd~~~~~~~~~~~~~-~~-~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~iwd~~~~~~~ 135 (377)
T 3dwl_C 76 DRNAYVYEKRPDGTWKQTLVL-LR-LNRAATFVRWSP-NEDKFAVGSG-----------------ARVISVCYFEQENDW 135 (377)
T ss_dssp TSSEEEC------CCCCEEEC-CC-CSSCEEEEECCT-TSSCCEEEES-----------------SSCEEECCC-----C
T ss_pred CCeEEEEEcCCCCceeeeeEe-cc-cCCceEEEEECC-CCCEEEEEec-----------------CCeEEEEEECCcccc
Confidence 3448889988765 1111111 11 123578889998 4665553322 4567777776554
Q ss_pred --eEEeec-CCCCcceeEEecCCCEEEEEEcCCCeEEEEEcc
Q 019290 193 --VTVMYN-GLSFPNGVALSNNNSFLLLAESATLKILRFWLQ 231 (343)
Q Consensus 193 --~~~~~~-~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~ 231 (343)
...+.. .......++++++++.+... ..++.|..|++.
T Consensus 136 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~ 176 (377)
T 3dwl_C 136 WVSKHLKRPLRSTILSLDWHPNNVLLAAG-CADRKAYVLSAY 176 (377)
T ss_dssp CCCEEECSSCCSCEEEEEECTTSSEEEEE-ESSSCEEEEEEC
T ss_pred eeeeEeecccCCCeEEEEEcCCCCEEEEE-eCCCEEEEEEEE
Confidence 333333 34557889999998866554 457889999975
No 180
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.75 E-value=2.7e-06 Score=77.73 Aligned_cols=191 Identities=9% Similarity=-0.010 Sum_probs=121.6
Q ss_pred CCceEEEcCCC-CeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNG-EGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g-~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
...++++.+++ ++++++..++.|..||..+++....... ......+..+++++++..|+.+.
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----------------~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP-----------------DVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT-----------------TTCCSCEEEEEECTTSSCEEEEE
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec-----------------CCCCCceEEEEECCCCCEEEEEe
Confidence 46789999998 6778888999999999887643322100 01223467899998445566665
Q ss_pred CCCeEEEEeCCCCeEEEcc-cccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce
Q 019290 115 AYFGLMVVGPNGGQAQQLA-SSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV 193 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~~~~~-~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 193 (343)
....|..+|+++++..... .... ...+..+++.+ ++.++++... ....+.|..||..+++.
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHE---GTRPVHAVFVS-EGKILTTGFS--------------RMSERQVALWDTKHLEE 257 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSC---SSSCCEEEECS-TTEEEEEEEC--------------TTCCEEEEEEETTBCSS
T ss_pred cCCcEEEEeCCCCceeeeeccCCC---CCcceEEEEcC-CCcEEEEecc--------------CCCCceEEEEcCccccC
Confidence 4445999999887654432 1211 12367889999 5887775411 01156788888865442
Q ss_pred --EEe-ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec--CCCCCCceeeCCCCCEEEE
Q 019290 194 --TVM-YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE--MPRFPDNIKSDSKGEFWIA 263 (343)
Q Consensus 194 --~~~-~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~lwi~ 263 (343)
... .........++++++++.++++...++.|..|++..... ....+.. ......++++.++|.+.++
T Consensus 258 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~--~~~~l~~~~~~~~v~~~~~sp~~~~~~s 330 (402)
T 2aq5_A 258 PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP--FLHYLSMFSSKESQRGMGYMPKRGLEVN 330 (402)
T ss_dssp CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT--CEEEEEEECCSSCCSEEEECCGGGSCGG
T ss_pred CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc--ceEeecccccCCcccceEEeccccccee
Confidence 111 223345778899999999988887789999999875321 0122221 1234567778887765443
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.73 E-value=1.5e-06 Score=78.61 Aligned_cols=181 Identities=10% Similarity=-0.006 Sum_probs=106.1
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe----
Q 019290 39 SLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD---- 114 (343)
Q Consensus 39 ~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~---- 114 (343)
++++++||+.+++...+..|+.+|..+++...+...+ ...........++ ++.++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~-----------------~~~~~~~~~~~~~-dg~~l~~~~~~~ 146 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP-----------------AEWVGYGTWVANS-DCTKLVGIEIRR 146 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC-----------------TTEEEEEEEEECT-TSSEEEEEEEEG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech-----------------hhcccccceeECC-CCCeeccccccC
Confidence 6789999998887777889999999887765543211 0000011122355 55554421
Q ss_pred -------------------CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeC-CCCe-EEEEeCCcccccccceee
Q 019290 115 -------------------AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDP-NTGI-VYFTDSSIYFQRRQYFMS 173 (343)
Q Consensus 115 -------------------~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~dg~-l~v~~~~~~~~~~~~~~~ 173 (343)
....|+.+|+++++.+.+.... ..+..+++.| + |+ +.++.....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-----~~~~~~~~sp~d-g~~l~~~~~~~~--------- 211 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-----QWLGHPIYRPYD-DSTVAFCHEGPH--------- 211 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-----SCEEEEEEETTE-EEEEEEEECSCT---------
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-----ccccccEECCCC-CCEEEEEEecCC---------
Confidence 1245999999998877664321 2356788888 5 54 444332100
Q ss_pred eeecCCCceEEEEeCCCCceEEeecCCC--CcceeEEecCCCEEEE-EEcCCC---eEEEEEccCccccccceeeecCCC
Q 019290 174 IATGDRSGRLLKYDPLKKNVTVMYNGLS--FPNGVALSNNNSFLLL-AESATL---KILRFWLQGERTTYTPQLFAEMPR 247 (343)
Q Consensus 174 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~d~~~lyv-~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
......|+.+|.++++.+.+..... .....+++|||+.|++ +...+. .|+++++.+ ++.+.+...++
T Consensus 212 ---~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~----g~~~~l~~~~~ 284 (388)
T 3pe7_A 212 ---DLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET----LENRQLTSMPA 284 (388)
T ss_dssp ---TTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT----CCEEEEEEECC
T ss_pred ---CCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCC----CceEEEEcCCC
Confidence 0113479999988777666554332 2345789999997754 443332 399999876 33233322221
Q ss_pred ------CCCceeeCCCCC
Q 019290 248 ------FPDNIKSDSKGE 259 (343)
Q Consensus 248 ------~p~~i~~d~~G~ 259 (343)
.+++..+.+||+
T Consensus 285 ~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 285 CSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp EEEEEECTTSSEEEEEEC
T ss_pred ceeeeecCCCCeEccCCC
Confidence 155566777775
No 182
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.73 E-value=4.7e-06 Score=75.42 Aligned_cols=217 Identities=10% Similarity=0.023 Sum_probs=121.1
Q ss_pred CCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeEEEEeC
Q 019290 46 GEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGP 124 (343)
Q Consensus 46 g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~d~ 124 (343)
+..+|+++.++.|+.+|..+++.. .+.... ... ....+. ++.+|++....+|+.+|.
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-----------------~~~---~~p~~~--~~~v~v~~~~g~l~~~d~ 160 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAG-----------------EAL---SRPVVS--DGLVLIHTSNGQLQALNE 160 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSS-----------------CCC---SCCEEE--TTEEEEECTTSEEEEEET
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCC-----------------ceE---cCCEEE--CCEEEEEcCCCeEEEEEC
Confidence 344888888999999999877643 221100 000 112333 679999865556999999
Q ss_pred CCCeEEEcccccCCC-CccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCC--
Q 019290 125 NGGQAQQLASSAGGI-PFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLS-- 201 (343)
Q Consensus 125 ~~~~~~~~~~~~~~~-~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-- 201 (343)
++|+........... ........+++. +.+|++.. .+.|+.+|+.+|+..-......
T Consensus 161 ~tG~~~W~~~~~~~~~~~~~~~~~~~~~--~~v~~g~~------------------~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 161 ADGAVKWTVNLDMPSLSLRGESAPTTAF--GAAVVGGD------------------NGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp TTCCEEEEEECCC-----CCCCCCEEET--TEEEECCT------------------TTEEEEEETTTCCEEEEEECCC--
T ss_pred CCCcEEEEEeCCCCceeecCCCCcEEEC--CEEEEEcC------------------CCEEEEEECCCCcEEEEEecccCC
Confidence 999866543221110 001113344443 78998543 4579999988777642221100
Q ss_pred ---------Cc-ceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcc
Q 019290 202 ---------FP-NGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKI 271 (343)
Q Consensus 202 ---------~~-~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~ 271 (343)
.. ....+ .++.+|+.. ..+.|+.++... ++..--..... ...+..+ ++++|+++..
T Consensus 221 ~~~~~~~~~~~~~~p~~--~~~~v~~~~-~~g~l~~~d~~t----G~~~w~~~~~~-~~~~~~~-~~~l~~~~~~----- 286 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVV--VNGVVFALA-YNGNLTALDLRS----GQIMWKRELGS-VNDFIVD-GNRIYLVDQN----- 286 (376)
T ss_dssp ---------CCCCCCEE--ETTEEEEEC-TTSCEEEEETTT----CCEEEEECCCC-EEEEEEE-TTEEEEEETT-----
T ss_pred CCcccccccccCCCcEE--ECCEEEEEe-cCcEEEEEECCC----CcEEeeccCCC-CCCceEE-CCEEEEEcCC-----
Confidence 01 11122 245677764 467899999764 22211111221 2234444 6789999864
Q ss_pred ccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 272 ESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
+.++++|+ +|+..-....... .........+++||+++.. ..+..++
T Consensus 287 --------------------g~l~~~d~~tG~~~w~~~~~~~---~~~~~~~~~~~~l~v~~~~-g~l~~~d 334 (376)
T 3q7m_A 287 --------------------DRVMALTIDGGVTLWTQSDLLH---RLLTSPVLYNGNLVVGDSE-GYLHWIN 334 (376)
T ss_dssp --------------------CCEEEEETTTCCEEEEECTTTT---SCCCCCEEETTEEEEECTT-SEEEEEE
T ss_pred --------------------CeEEEEECCCCcEEEeecccCC---CcccCCEEECCEEEEEeCC-CeEEEEE
Confidence 47889997 5776554432211 2233334458899998764 3566555
No 183
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.73 E-value=4.4e-05 Score=69.16 Aligned_cols=262 Identities=14% Similarity=0.071 Sum_probs=142.2
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeee-cCCC-------cc-ccccCCC-CC-----------------
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFAT-TAPH-------RA-REICDGS-TN----------------- 88 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~-~~~~-------~~-~~~~~~~-~~----------------- 88 (343)
...++++.++|+.+.++..++.|..||..+++...... .... +. ..+..+. ..
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~ 147 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNM 147 (380)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSS
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCc
Confidence 46789999999988889999999999987754332211 0000 00 0000000 00
Q ss_pred ---cccCCCcCCeeeEEEeCCCC-eEEEEeCCCeEEEEeCCCCeEEEcccc-cCCCCccCcceeEEeCCCCeEEEEeCCc
Q 019290 89 ---TTLEPLCGRPLGIKFNPVTC-DLYIADAYFGLMVVGPNGGQAQQLASS-AGGIPFRFTNDLDIDPNTGIVYFTDSSI 163 (343)
Q Consensus 89 ---~~~~~~~~~p~gi~~~~~~~-~l~v~~~~~gi~~~d~~~~~~~~~~~~-~~~~~~~~~~~i~~d~~dg~l~v~~~~~ 163 (343)
.......+.+..+.+.+.++ .|..+.....|..+|.++++....... ........+..+++.+.++.++++...
T Consensus 148 ~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~- 226 (380)
T 3iz6_a 148 PVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC- 226 (380)
T ss_dssp TTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET-
T ss_pred cceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC-
Confidence 00001111233445555333 355553333488899887765433211 111112345667776534666665433
Q ss_pred ccccccceeeeeecCCCceEEEEeCC-CCc-eEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCcccccccee
Q 019290 164 YFQRRQYFMSIATGDRSGRLLKYDPL-KKN-VTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQL 241 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~ 241 (343)
.+.|..||.. ++. ...+.......+.++++|++..+ ++.+.++.|..|++..... ...
T Consensus 227 ----------------D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~i~lwd~~~~~~---~~~ 286 (380)
T 3iz6_a 227 ----------------DTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRF-GTGSDDGTCRLFDMRTGHQ---LQV 286 (380)
T ss_dssp ----------------TSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEE-EEECSSSCEEEEETTTTEE---EEE
T ss_pred ----------------CCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeE-EEEcCCCeEEEEECCCCcE---EEE
Confidence 4568888865 222 33444444567899999998854 5566789999999875321 112
Q ss_pred eecCC-------CCCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCC
Q 019290 242 FAEMP-------RFPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGN 313 (343)
Q Consensus 242 ~~~~~-------~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~ 313 (343)
+.... .....++++++|++.++... .+.|..+|. .++....+......
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~------------------------dg~i~vwd~~~~~~~~~~~~~~~~ 342 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYS------------------------NGDCYVWDTLLAEMVLNLGTLQNS 342 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECT------------------------TSCEEEEETTTCCEEEEECCSCSS
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEEC------------------------CCCEEEEECCCCceEEEEecccCC
Confidence 21110 11345788999988887665 356777886 45555554321111
Q ss_pred ccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 314 TLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 314 ~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
....+..+... +|++.+++.....|.+++
T Consensus 343 h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 343 HEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp CCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred CCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 23445555444 555555555555555543
No 184
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.73 E-value=3.5e-05 Score=68.76 Aligned_cols=188 Identities=12% Similarity=0.038 Sum_probs=113.0
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.+++..+.++..++.|..||..+++...... .....+..+++++++..|..+..
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~-------------------~h~~~v~~v~~sp~~~~l~s~~~ 138 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV-------------------GHQSEVYSVAFSPDNRQILSAGA 138 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE-------------------CCCSCEEEEEECSSTTEEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-------------------CCCCcEEEEEECCCCCEEEEEcC
Confidence 35689999999988888999999999988765332111 12234678999984445666644
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCC----------eEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTG----------IVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg----------~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
...|..+|..+......... .. ....+..+++.+ ++ .++++.. ..+.|..
T Consensus 139 d~~i~~wd~~~~~~~~~~~~-~~-~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~-----------------~d~~i~i 198 (343)
T 2xzm_R 139 EREIKLWNILGECKFSSAEK-EN-HSDWVSCVRYSP-IMKSANKVQPFAPYFASVG-----------------WDGRLKV 198 (343)
T ss_dssp TSCEEEEESSSCEEEECCTT-TS-CSSCEEEEEECC-CCCSCSCCCSSCCEEEEEE-----------------TTSEEEE
T ss_pred CCEEEEEeccCCceeeeecc-cC-CCceeeeeeecc-ccccccccCCCCCEEEEEc-----------------CCCEEEE
Confidence 44488999875433332211 11 123466777777 34 3333222 1456778
Q ss_pred EeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEec
Q 019290 186 YDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMN 265 (343)
Q Consensus 186 ~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~ 265 (343)
+|........+.........++++++++.|. +...++.|..|++..... ....+ ........+++++++.+..+..
T Consensus 199 wd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~-sgs~dg~v~iwd~~~~~~--~~~~~-~~~~~v~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 199 WNTNFQIRYTFKAHESNVNHLSISPNGKYIA-TGGKDKKLLIWDILNLTY--PQREF-DAGSTINQIAFNPKLQWVAVGT 274 (343)
T ss_dssp EETTTEEEEEEECCSSCEEEEEECTTSSEEE-EEETTCEEEEEESSCCSS--CSEEE-ECSSCEEEEEECSSSCEEEEEE
T ss_pred EcCCCceeEEEcCccccceEEEECCCCCEEE-EEcCCCeEEEEECCCCcc--cceee-cCCCcEEEEEECCCCCEEEEEC
Confidence 8854333333344445678899999998654 455688999999843211 11122 1122245677888887665544
Q ss_pred c
Q 019290 266 S 266 (343)
Q Consensus 266 ~ 266 (343)
.
T Consensus 275 d 275 (343)
T 2xzm_R 275 D 275 (343)
T ss_dssp S
T ss_pred C
Confidence 3
No 185
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.72 E-value=4.5e-05 Score=67.37 Aligned_cols=185 Identities=8% Similarity=0.059 Sum_probs=113.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||..+++...... .....+..+.+++++..|..+..
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~-------------------~h~~~v~~~~~~~~~~~l~s~s~ 127 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV-------------------GHKSDVMSVDIDKKASMIISGSR 127 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------------------CCSSCEEEEEECTTSCEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc-------------------cCCCcEEEEEEcCCCCEEEEEeC
Confidence 35678999999988888999999999998765332111 12234678899983344555543
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCC-----CCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPN-----TGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK 190 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-----dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 190 (343)
...|..+|.++.....+.. . ...+..+.+.+. ++.+.++... .+.|..+|..+
T Consensus 128 D~~i~vwd~~~~~~~~~~~-h----~~~v~~~~~~~~~~~~~~~~~l~s~~~-----------------d~~i~~wd~~~ 185 (319)
T 3frx_A 128 DKTIKVWTIKGQCLATLLG-H----NDWVSQVRVVPNEKADDDSVTIISAGN-----------------DKMVKAWNLNQ 185 (319)
T ss_dssp TSCEEEEETTSCEEEEECC-C----SSCEEEEEECCC------CCEEEEEET-----------------TSCEEEEETTT
T ss_pred CCeEEEEECCCCeEEEEec-c----CCcEEEEEEccCCCCCCCccEEEEEeC-----------------CCEEEEEECCc
Confidence 3348889987655444321 1 123556666652 1223443222 45688888876
Q ss_pred CceEE-eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 191 KNVTV-MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 191 ~~~~~-~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.+... +.........++++|+++.+. +...++.|..|++..... ...+. .......+++.++|.+.++...
T Consensus 186 ~~~~~~~~~h~~~v~~~~~sp~g~~l~-s~~~dg~i~iwd~~~~~~---~~~~~-~~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 186 FQIEADFIGHNSNINTLTASPDGTLIA-SAGKDGEIMLWNLAAKKA---MYTLS-AQDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp TEEEEEECCCCSCEEEEEECTTSSEEE-EEETTCEEEEEETTTTEE---EEEEE-CCSCEEEEEECSSSSEEEEEET
T ss_pred chhheeecCCCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCcE---EEEec-CCCcEEEEEEcCCCCEEEEEcC
Confidence 65443 333345578899999998554 445688999999865221 11221 2222445788999977666544
No 186
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.72 E-value=9.1e-06 Score=73.57 Aligned_cols=245 Identities=11% Similarity=0.049 Sum_probs=143.2
Q ss_pred CCceEEEcCC----C---CeeEEEecCCEEEEEEcCCCC------eEEeeecCCCccccccCCCCCcccCCCcCCeeeEE
Q 019290 36 GPESLAFDCN----G---EGPYVGVSDGRILKWKAANSG------WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIK 102 (343)
Q Consensus 36 ~p~~l~~d~~----g---~~l~~~~~~g~i~~~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (343)
...++++.++ | +.++++..++.|..|+..+++ ...+..... ......+..+.
T Consensus 64 ~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~v~~~~ 128 (397)
T 1sq9_A 64 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDS---------------DMKKHSFWALK 128 (397)
T ss_dssp CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCT---------------TGGGSCEEEEE
T ss_pred cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeeccccc---------------ccCCCcEEEEE
Confidence 3578999998 8 878888889999999887654 333321000 00024567899
Q ss_pred Ee----CCCCe-EEEEeCCCeEEEEeCCC------CeE-E-----Eccc--ccCCCCccCcceeEEeCCCCeEEEEeCCc
Q 019290 103 FN----PVTCD-LYIADAYFGLMVVGPNG------GQA-Q-----QLAS--SAGGIPFRFTNDLDIDPNTGIVYFTDSSI 163 (343)
Q Consensus 103 ~~----~~~~~-l~v~~~~~gi~~~d~~~------~~~-~-----~~~~--~~~~~~~~~~~~i~~d~~dg~l~v~~~~~ 163 (343)
+. +++.. |+++.....|..+|.++ ++. . .+.. .........+..+++.+ ++ ++++...
T Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~- 205 (397)
T 1sq9_A 129 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFN- 205 (397)
T ss_dssp EECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECT-
T ss_pred EeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeC-
Confidence 99 74555 66664444488888765 321 1 1100 00011224578999999 47 5554332
Q ss_pred ccccccceeeeeecCCCceEEEEeCCCCceEEeecC-------CCCcceeEEecCCCEEEEEEcCC---CeEEEEEccCc
Q 019290 164 YFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNG-------LSFPNGVALSNNNSFLLLAESAT---LKILRFWLQGE 233 (343)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-------~~~~~~i~~~~d~~~lyv~~~~~---~~i~~~~~~~~ 233 (343)
.+.|..||..+++....... ......+++++++..++++. .+ +.|..|++...
T Consensus 206 ----------------dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~-~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 206 ----------------NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH-DSNSFGCITLYETEFG 268 (397)
T ss_dssp ----------------TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE-EETTEEEEEEEETTTC
T ss_pred ----------------CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe-cCCCCceEEEEECCCC
Confidence 56788899876665433333 45678899999998766554 45 78999998653
Q ss_pred cccccceeeec-------------CCCCCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-
Q 019290 234 RTTYTPQLFAE-------------MPRFPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV- 299 (343)
Q Consensus 234 ~~~~~~~~~~~-------------~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~- 299 (343)
.. ...+.. .......++++++|+++++... .+.|..+|.
T Consensus 269 ~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------------dg~i~iwd~~ 321 (397)
T 1sq9_A 269 ER---IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW------------------------DGKLRFWDVK 321 (397)
T ss_dssp CE---EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET------------------------TSEEEEEETT
T ss_pred cc---cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC------------------------CCeEEEEEcC
Confidence 21 112211 1222345778889987776654 346777886
Q ss_pred CCCEEEEeeCCCC--Cc---------------cCCceeEEEe-CC----------EEEEecCCCCeEEEEc
Q 019290 300 NGNVVDVLDGNEG--NT---------------LNSVSEVQEY-GE----------YLYTGSSVQPYVVVIK 342 (343)
Q Consensus 300 ~g~~~~~~~~~~~--~~---------------~~~~~~~~~~-~g----------~l~i~~~~~~~i~~~~ 342 (343)
.++.+..+..+.. .. ...+..+... ++ +++++......|.+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 322 TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp TTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred CCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 4666666551100 01 2345555544 44 5666666667777665
No 187
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.72 E-value=1e-05 Score=75.10 Aligned_cols=159 Identities=13% Similarity=0.097 Sum_probs=101.2
Q ss_pred CCceEEEcCCCCee-EEEecCCEEEEEEcC--CCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 36 GPESLAFDCNGEGP-YVGVSDGRILKWKAA--NSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 36 ~p~~l~~d~~g~~l-~~~~~~g~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
...+++++++|+.+ +++..++.|..||.. ++......... .....+..+++++++..|++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~-----------------~~~~~v~~~~~sp~~~~l~~ 166 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF-----------------CFSKRPNAISIAEDDTTVII 166 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE-----------------ECSSCEEEEEECTTSSEEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc-----------------cCCCCceEEEEcCCCCEEEE
Confidence 36789999999975 567788999999987 55433221100 11234678999985556777
Q ss_pred EeCCCeEEEEeCCCCeEEE-cccccCCCCccCcceeEEeCCC---CeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 113 ADAYFGLMVVGPNGGQAQQ-LASSAGGIPFRFTNDLDIDPNT---GIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 113 ~~~~~gi~~~d~~~~~~~~-~~~~~~~~~~~~~~~i~~d~~d---g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
++....++.++..+++... ......+ ....+..+++.+ + +.++++... .+.|..||.
T Consensus 167 ~~~~g~v~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~sp-~~~~~~~l~s~~~-----------------d~~i~vwd~ 227 (450)
T 2vdu_B 167 ADKFGDVYSIDINSIPEEKFTQEPILG-HVSMLTDVHLIK-DSDGHQFIITSDR-----------------DEHIKISHY 227 (450)
T ss_dssp EETTSEEEEEETTSCCCSSCCCCCSEE-CSSCEEEEEEEE-CTTSCEEEEEEET-----------------TSCEEEEEE
T ss_pred EeCCCcEEEEecCCcccccccceeeec-ccCceEEEEEcC-CCCCCcEEEEEcC-----------------CCcEEEEEC
Confidence 7544459999987665331 1011111 124578889988 6 666554432 456777777
Q ss_pred CCCceE-Eee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 189 LKKNVT-VMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 189 ~~~~~~-~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.+++.. .+. ........++++ +++.++.+ ..++.|..|++..
T Consensus 228 ~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~-~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA-GGDDKIFAWDWKT 271 (450)
T ss_dssp SCTTCEEEECCCCSSCEEEEEEC-STTEEEEE-ESSSEEEEEETTT
T ss_pred CCCceeeeeecCCCCceEEEEEC-CCCEEEEE-eCCCeEEEEECCC
Confidence 666543 222 333557889999 88866654 4688999999875
No 188
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.71 E-value=9.7e-07 Score=84.94 Aligned_cols=182 Identities=8% Similarity=-0.035 Sum_probs=110.6
Q ss_pred CCceEEEcCCCCeeEEEec-----CCEEEEEEc--CCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCC
Q 019290 36 GPESLAFDCNGEGPYVGVS-----DGRILKWKA--ANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTC 108 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~-----~g~i~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~ 108 (343)
...++++++| +++|+... ..+|+.++. .++.. .+. ........++.++++
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~---------------------~~~~~~~~~~s~dg~ 122 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLE---------------------AVKPMRILSGVDTGE 122 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECT---------------------TSCSBEEEEEEECSS
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-ccc---------------------CCCCceeeeeCCCCC
Confidence 3567788888 76775543 226777877 44332 211 111122345555333
Q ss_pred -eEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEe
Q 019290 109 -DLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYD 187 (343)
Q Consensus 109 -~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 187 (343)
.+|++....++..+|.++++.+.+.... . .+++++| ||+.++..... ......|+++|
T Consensus 123 ~~~~~s~~~~~~~l~d~~~g~~~~l~~~~------~-~~~~~sp-DG~~la~~~~~-------------~~~~~~i~~~d 181 (582)
T 3o4h_A 123 AVVFTGATEDRVALYALDGGGLRELARLP------G-FGFVSDI-RGDLIAGLGFF-------------GGGRVSLFTSN 181 (582)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEEEEEES------S-CEEEEEE-ETTEEEEEEEE-------------ETTEEEEEEEE
T ss_pred eEEEEecCCCCceEEEccCCcEEEeecCC------C-ceEEECC-CCCEEEEEEEc-------------CCCCeEEEEEc
Confidence 4565554556778899888877664321 1 6788999 58766633220 11124699999
Q ss_pred CCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCC--eEEEEEccCccccccceeeecCCCCCCcee--------eCCC
Q 019290 188 PLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATL--KILRFWLQGERTTYTPQLFAEMPRFPDNIK--------SDSK 257 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~--------~d~~ 257 (343)
.++++.+.+..........+++|||+.|+.++ ..+ .|+++++++. +.+.+......+.+++ +++|
T Consensus 182 ~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~spd 256 (582)
T 3o4h_A 182 LSSGGLRVFDSGEGSFSSASISPGMKVTAGLE-TAREARLVTVDPRDG----SVEDLELPSKDFSSYRPTAITWLGYLPD 256 (582)
T ss_dssp TTTCCCEEECCSSCEEEEEEECTTSCEEEEEE-CSSCEEEEEECTTTC----CEEECCCSCSHHHHHCCSEEEEEEECTT
T ss_pred CCCCCceEeecCCCccccceECCCCCEEEEcc-CCCeeEEEEEcCCCC----cEEEccCCCcChhhhhhccccceeEcCC
Confidence 98888877655545568899999999888444 455 8999998763 3232221222223345 8999
Q ss_pred CCEEEEecc
Q 019290 258 GEFWIAMNS 266 (343)
Q Consensus 258 G~lwi~~~~ 266 (343)
|.++++...
T Consensus 257 g~~~~~~~~ 265 (582)
T 3o4h_A 257 GRLAVVARR 265 (582)
T ss_dssp SCEEEEEEE
T ss_pred CcEEEEEEc
Confidence 988887765
No 189
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.71 E-value=3.9e-05 Score=68.87 Aligned_cols=240 Identities=15% Similarity=0.108 Sum_probs=140.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.|+|..+.++..++.+..|+........... . .............+.+.+++..|..+..
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~----~---------~~~~~~h~~~v~~~~~~~~~~~l~t~s~ 174 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAA----K---------KKSVAMHTNYLSACSFTNSDMQILTASG 174 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGG----G---------CEEEEECSSCEEEEEECSSSSEEEEEET
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccc----c---------ceeeeccCCcEEEEEEeCCCCEEEEEeC
Confidence 46789999999988888889999888764321000000 0 0000011223567888884456666654
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCC-CCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPN-TGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
...|..+|.++++......... ..+..+.+.+. +|.++++... .+.|..||..+++..
T Consensus 175 D~~v~lwd~~~~~~~~~~~~h~----~~v~~~~~~~~~~g~~l~sgs~-----------------Dg~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFHGHG----ADVLCLDLAPSETGNTFVSGGC-----------------DKKAMVWDMRSGQCV 233 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECCS----SCEEEEEECCCSSCCEEEEEET-----------------TSCEEEEETTTCCEE
T ss_pred CCcEEEEeCCCCeEEEEEcCCC----CCeEEEEEEeCCCCCEEEEEeC-----------------CCeEEEEECCCCcEE
Confidence 4458999998887543322211 23455666542 2555554332 467888998777654
Q ss_pred E-eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCC--CCCCceeeCCCCCEEEEeccCCCcc
Q 019290 195 V-MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMP--RFPDNIKSDSKGEFWIAMNSARGKI 271 (343)
Q Consensus 195 ~-~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~G~lwi~~~~~~~~~ 271 (343)
. +.......+.++++|++..+. +...++.|..|++..... ...+.... .....+.++++|++.++...
T Consensus 234 ~~~~~h~~~v~~v~~~p~~~~l~-s~s~D~~v~lwd~~~~~~---~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~----- 304 (354)
T 2pbi_B 234 QAFETHESDVNSVRYYPSGDAFA-SGSDDATCRLYDLRADRE---VAIYSKESIIFGASSVDFSLSGRLLFAGYN----- 304 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEE---EEEECCTTCCSCEEEEEECTTSSEEEEEET-----
T ss_pred EEecCCCCCeEEEEEeCCCCEEE-EEeCCCeEEEEECCCCcE---EEEEcCCCcccceeEEEEeCCCCEEEEEEC-----
Confidence 3 333345578899999988554 555688999999865321 11221111 11234678899988777655
Q ss_pred ccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEE
Q 019290 272 ESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVI 341 (343)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~ 341 (343)
.+.|..+|. +++.+..+... ...+..+... +|++.++......|.++
T Consensus 305 -------------------d~~i~vwd~~~~~~~~~l~~h----~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 305 -------------------DYTINVWDVLKGSRVSILFGH----ENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp -------------------TSCEEEEETTTCSEEEEECCC----SSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred -------------------CCcEEEEECCCCceEEEEECC----CCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 346777775 57666555432 2345555544 56655555555566554
No 190
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.71 E-value=3.9e-05 Score=69.88 Aligned_cols=203 Identities=9% Similarity=-0.015 Sum_probs=114.5
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++ .++.+..|+..+++................ .............+..+++++++..|..+..
T Consensus 66 ~V~~v~fspdg~~la~g-~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPE-NLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 143 (393)
T ss_dssp CCCEEEECTTSSEEEEE-CBSCEEEEETTTCCEEEEECC------------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred EEEEEEECCCCCEEEEE-cCCcEEEEEecCCCEEEEecCccccccccc-cccccccCCCceeEEEEEECCCCCEEEEEcC
Confidence 46799999999965555 456788888877654322111000000000 0000000001113568999984445555543
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...|..+|.++++........ ...+..+++.+ ++...++... .+.|..||..+++...
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h----~~~v~~~~~~p-~~~~l~s~s~-----------------d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGH----EQDIYSLDYFP-SGDKLVSGSG-----------------DRTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCC----SSCEEEEEECT-TSSEEEEEET-----------------TSEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEEEEccC----CCCEEEEEEcC-CCCEEEEecC-----------------CCcEEEEECCCCeeEE
Confidence 344899999988755433222 13478899999 4776664433 4678888988776544
Q ss_pred eecCCCCcceeEEec-CCCEEEEEEcCCCeEEEEEccCccccccceeeec----CCC---CCCceeeCCCCCEEEEecc
Q 019290 196 MYNGLSFPNGVALSN-NNSFLLLAESATLKILRFWLQGERTTYTPQLFAE----MPR---FPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~---~p~~i~~d~~G~lwi~~~~ 266 (343)
..........+++++ +++. +++...++.|..|++..... ...+.. ..+ ....++++++|++.++...
T Consensus 202 ~~~~~~~v~~~~~~~~~~~~-l~~~s~d~~v~iwd~~~~~~---~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 202 TLSIEDGVTTVAVSPGDGKY-IAAGSLDRAVRVWDSETGFL---VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp EEECSSCEEEEEECSTTCCE-EEEEETTSCEEEEETTTCCE---EEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEcCCCcEEEEEECCCCCE-EEEEcCCCcEEEEECCCCcE---EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 333334567788888 6664 45556788999999765321 111110 011 1334678889987776554
No 191
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.70 E-value=1.4e-05 Score=72.13 Aligned_cols=156 Identities=13% Similarity=0.044 Sum_probs=104.1
Q ss_pred CCceEEEcC-CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDC-NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~-~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
...++++.+ +++.++++..++.|..||..+.....+.... .....+..+++++++..|+.+.
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~ 182 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTD-----------------SWDYWYCCVDVSVSRQMLATGD 182 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCC-----------------CSSCCEEEEEEETTTTEEEEEE
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccC-----------------CCCCCeEEEEECCCCCEEEEEC
Confidence 467899999 6787888889999999999875555443211 1123467899998555666665
Q ss_pred CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCCC---
Q 019290 115 AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK--- 190 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~--- 190 (343)
....|..+|.+......+. .. ...+..+++.+ ++. ++++... .+.|..||..+
T Consensus 183 ~d~~i~i~d~~~~~~~~~~-~h----~~~v~~~~~~~-~~~~~l~s~~~-----------------d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 183 STGRLLLLGLDGHEIFKEK-LH----KAKVTHAEFNP-RCDWLMATSSV-----------------DATVKLWDLRNIKD 239 (383)
T ss_dssp TTSEEEEEETTSCEEEEEE-CS----SSCEEEEEECS-SCTTEEEEEET-----------------TSEEEEEEGGGCCS
T ss_pred CCCCEEEEECCCCEEEEec-cC----CCcEEEEEECC-CCCCEEEEEeC-----------------CCEEEEEeCCCCCc
Confidence 4445899998654444432 11 14578899999 476 6554432 45677888764
Q ss_pred -CceEEeecCCCCcceeEEec-CCCEEEEEEcCCCeEEEEEccC
Q 019290 191 -KNVTVMYNGLSFPNGVALSN-NNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 191 -~~~~~~~~~~~~~~~i~~~~-d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
+..............+++++ ++..++.+ ..++.|..|++..
T Consensus 240 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~-~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 240 KNSYIAEMPHEKPVNAAYFNPTDSTKLLTT-DQRNEIRVYSSYD 282 (383)
T ss_dssp TTCEEEEEECSSCEEEEEECTTTSCEEEEE-ESSSEEEEEETTB
T ss_pred ccceEEEecCCCceEEEEEcCCCCCEEEEE-cCCCcEEEEECCC
Confidence 33333333445678899999 88866655 4578999999875
No 192
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.69 E-value=9.8e-06 Score=73.36 Aligned_cols=239 Identities=9% Similarity=-0.058 Sum_probs=134.0
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCC-------eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCC-
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSG-------WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVT- 107 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~- 107 (343)
...++++++ +.++++..++.|..|+..+.+ ...+. .....+..+.+.+ +
T Consensus 18 ~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------------------~h~~~v~~~~~~~-~~ 74 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF--------------------VHKSGLHHVDVLQ-AI 74 (397)
T ss_dssp CEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE--------------------CCTTCEEEEEEEE-EE
T ss_pred CeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEe--------------------cCCCcEEEEEEec-cc
Confidence 467888988 668888899999999987765 22221 1223467888888 4
Q ss_pred ---C----eEEEEeCCCeEEEEeCCCCe------EEEcccccCCC-CccCcceeEEe----CCCCeE-EEEeCCcccccc
Q 019290 108 ---C----DLYIADAYFGLMVVGPNGGQ------AQQLASSAGGI-PFRFTNDLDID----PNTGIV-YFTDSSIYFQRR 168 (343)
Q Consensus 108 ---~----~l~v~~~~~gi~~~d~~~~~------~~~~~~~~~~~-~~~~~~~i~~d----~~dg~l-~v~~~~~~~~~~ 168 (343)
+ .|+.+.....|..++.++++ ...+. ..... ....+..+++. + ++.. +++...
T Consensus 75 ~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~------ 146 (397)
T 1sq9_A 75 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASNDR-LLSHRLVATDV------ 146 (397)
T ss_dssp ETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC-----CEEEEEEET------
T ss_pred ccCCccccEEEEEcCCCCEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccCC-CCceEEEEEeC------
Confidence 5 45555433448888877665 33331 11100 02457889999 8 4665 554322
Q ss_pred cceeeeeecCCCceEEEEeCCC------Cc-eE-----Eee-------cCCCCcceeEEecCCCEEEEEEcCCCeEEEEE
Q 019290 169 QYFMSIATGDRSGRLLKYDPLK------KN-VT-----VMY-------NGLSFPNGVALSNNNSFLLLAESATLKILRFW 229 (343)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~d~~~------~~-~~-----~~~-------~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~ 229 (343)
.+.|..||..+ ++ .. .+. ........+++++++ ++++...++.|..|+
T Consensus 147 -----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 147 -----------KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISE 213 (397)
T ss_dssp -----------TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEE
T ss_pred -----------CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEE
Confidence 34566666554 22 22 221 123457889999988 455556789999999
Q ss_pred ccCccccccceeeec---C---CCCCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCC
Q 019290 230 LQGERTTYTPQLFAE---M---PRFPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGN 302 (343)
Q Consensus 230 ~~~~~~~~~~~~~~~---~---~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~ 302 (343)
+..... ...+.. . ......++++++|+++++....+. .+.|..+|. +++
T Consensus 214 ~~~~~~---~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~---------------------~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 214 LSTLRP---LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS---------------------FGCITLYETEFGE 269 (397)
T ss_dssp TTTTEE---EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT---------------------EEEEEEEETTTCC
T ss_pred CCCCce---eEEEeccccccccCCccceEEECCCCCEEEEEecCCC---------------------CceEEEEECCCCc
Confidence 865221 122211 1 223455778999987776655100 036777775 566
Q ss_pred EEEEeeCCCC---------CccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 303 VVDVLDGNEG---------NTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 303 ~~~~~~~~~~---------~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
.+..+..+.. .....+..+... +++++++......|.+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 270 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 6666543110 012334444443 455555555556666664
No 193
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.69 E-value=3.6e-06 Score=74.54 Aligned_cols=185 Identities=10% Similarity=-0.055 Sum_probs=113.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCC----eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCC-eE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSG----WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTC-DL 110 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~-~l 110 (343)
...++++.++|+.++++..++.|..|+..++. ...+. .....+..+++++++. .|
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~~l 72 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--------------------RYKHPLLCCNFIDNTDLQI 72 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE--------------------ECSSCEEEEEEEESSSEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee--------------------ecCCceEEEEECCCCCcEE
Confidence 46799999999988888899999999987655 22221 1123467889998444 46
Q ss_pred EEEeCCCeEEEEeC-CCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC
Q 019290 111 YIADAYFGLMVVGP-NGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL 189 (343)
Q Consensus 111 ~v~~~~~gi~~~d~-~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 189 (343)
+.+.....|..+|. ++++...+... .....+..+++.+ ++.++.+.. .+.|..+|..
T Consensus 73 ~~~~~dg~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~-~~~l~s~~~------------------d~~i~iwd~~ 130 (342)
T 1yfq_A 73 YVGTVQGEILKVDLIGSPSFQALTNN---EANLGICRICKYG-DDKLIAASW------------------DGLIEVIDPR 130 (342)
T ss_dssp EEEETTSCEEEECSSSSSSEEECBSC---CCCSCEEEEEEET-TTEEEEEET------------------TSEEEEECHH
T ss_pred EEEcCCCeEEEEEeccCCceEecccc---CCCCceEEEEeCC-CCEEEEEcC------------------CCeEEEEccc
Confidence 66654444999999 88876554321 0123577888888 456655433 3567777765
Q ss_pred C---------CceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC-ccccccceeeecCCCCCCceeeCC-CC
Q 019290 190 K---------KNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG-ERTTYTPQLFAEMPRFPDNIKSDS-KG 258 (343)
Q Consensus 190 ~---------~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~p~~i~~d~-~G 258 (343)
+ ++.............+++++++ ++++ ..++.|..|++.. ... ...............+++.+ +|
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~ 206 (342)
T 1yfq_A 131 NYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDD-NGTIEESGLKYQIRDVALLPKEQ 206 (342)
T ss_dssp HHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTC-CCEEEECSCSSCEEEEEECSGGG
T ss_pred ccccccccccCCeeeEEeeCCceEEEEecCCc--EEEE-eCCCeEEEEECCccccc-cceeeecCCCCceeEEEECCCCC
Confidence 3 3221112223446778888765 4444 5678999999865 221 11111111222345677888 88
Q ss_pred CEEEEecc
Q 019290 259 EFWIAMNS 266 (343)
Q Consensus 259 ~lwi~~~~ 266 (343)
+++++...
T Consensus 207 ~~l~~~~~ 214 (342)
T 1yfq_A 207 EGYACSSI 214 (342)
T ss_dssp CEEEEEET
T ss_pred CEEEEEec
Confidence 77666554
No 194
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.68 E-value=7e-06 Score=76.24 Aligned_cols=145 Identities=11% Similarity=0.066 Sum_probs=84.4
Q ss_pred CeeeEEEeCCCCeEEEEeCCCe-EEEEeCC--CCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceee
Q 019290 97 RPLGIKFNPVTCDLYIADAYFG-LMVVGPN--GGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMS 173 (343)
Q Consensus 97 ~p~gi~~~~~~~~l~v~~~~~g-i~~~d~~--~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~ 173 (343)
.+..+++++++..|+++...+| |..++.+ +++......... ....+..+++.+ ++...++...
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~v~~~~~sp-~~~~l~~~~~----------- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC--FSKRPNAISIAE-DDTTVIIADK----------- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE--CSSCEEEEEECT-TSSEEEEEET-----------
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc--CCCCceEEEEcC-CCCEEEEEeC-----------
Confidence 4678999984444444433344 7788877 554433222110 113578899999 4665443322
Q ss_pred eeecCCCceEEEEeCCCCceE-----EeecCCCCcceeEEecC---CCEEEEEEcCCCeEEEEEccCccccccceeee-c
Q 019290 174 IATGDRSGRLLKYDPLKKNVT-----VMYNGLSFPNGVALSNN---NSFLLLAESATLKILRFWLQGERTTYTPQLFA-E 244 (343)
Q Consensus 174 ~~~~~~~~~v~~~d~~~~~~~-----~~~~~~~~~~~i~~~~d---~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~ 244 (343)
.+.++.++..+++.. .+.........++++++ ++.+ ++...++.|..|++..... ...+. .
T Consensus 170 ------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l-~s~~~d~~i~vwd~~~~~~---~~~~~~~ 239 (450)
T 2vdu_B 170 ------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFI-ITSDRDEHIKISHYPQCFI---VDKWLFG 239 (450)
T ss_dssp ------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEE-EEEETTSCEEEEEESCTTC---EEEECCC
T ss_pred ------CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEE-EEEcCCCcEEEEECCCCce---eeeeecC
Confidence 467888887655432 22233345788999998 6555 4555678999999865221 12221 1
Q ss_pred CCCCCCceeeCCCCCEEEEecc
Q 019290 245 MPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 245 ~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
..+....+++. +|+++++...
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~ 260 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGG 260 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEES
T ss_pred CCCceEEEEEC-CCCEEEEEeC
Confidence 22234567788 8887776655
No 195
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.67 E-value=6.3e-06 Score=73.26 Aligned_cols=191 Identities=9% Similarity=-0.005 Sum_probs=111.5
Q ss_pred CCceEEEcCC---CCeeEEEecCCEEEEEEcCCCC--eEEeeecCCCccccccCCCCCcccCCCcCCeeeEE------Ee
Q 019290 36 GPESLAFDCN---GEGPYVGVSDGRILKWKAANSG--WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIK------FN 104 (343)
Q Consensus 36 ~p~~l~~d~~---g~~l~~~~~~g~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~------~~ 104 (343)
...++++.++ |+.++++..++.|..||..+++ ...+. ........+. ++
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~s 126 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVK--------------------GHKEIINAIDGIGGLGIG 126 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEEC--------------------CCSSCEEEEEEESGGGCC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEE--------------------ecccceEEEeeccccccC
Confidence 4678899998 6878888899999999987654 22221 1122344553 35
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCCe--EEEcccccCCCCccCcceeE----EeCCCCeEEEEeCCcccccccceeeeeecC
Q 019290 105 PVTCDLYIADAYFGLMVVGPNGGQ--AQQLASSAGGIPFRFTNDLD----IDPNTGIVYFTDSSIYFQRRQYFMSIATGD 178 (343)
Q Consensus 105 ~~~~~l~v~~~~~gi~~~d~~~~~--~~~~~~~~~~~~~~~~~~i~----~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~ 178 (343)
+++..|+.+.....|..+|.++++ ...+ ....+.....+..++ +.+ ++.+.++...
T Consensus 127 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~---------------- 188 (357)
T 3i2n_A 127 EGAPEIVTGSRDGTVKVWDPRQKDDPVANM-EPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYD---------------- 188 (357)
T ss_dssp -CCCEEEEEETTSCEEEECTTSCSSCSEEE-CCCTTSCCCCEEEEEEECCCC--CCCEEEEEET----------------
T ss_pred CCccEEEEEeCCCeEEEEeCCCCCCcceec-cccCCCCCCceEEEEEEeccCC-CCCEEEEEcc----------------
Confidence 534455555433449999988764 2222 221221123455666 456 4665554332
Q ss_pred CCceEEEEeCCCCceEEeecCCCCcceeEEec---CCCEEEEEEcCCCeEEEEEccCccccccceee--ecCCCCCCcee
Q 019290 179 RSGRLLKYDPLKKNVTVMYNGLSFPNGVALSN---NNSFLLLAESATLKILRFWLQGERTTYTPQLF--AEMPRFPDNIK 253 (343)
Q Consensus 179 ~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~---d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~p~~i~ 253 (343)
.+.|..||..+++.............+++++ ++..++++ ..++.|..|++............ .........++
T Consensus 189 -d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~ 266 (357)
T 3i2n_A 189 -NGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVR 266 (357)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEE
T ss_pred -CCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEE
Confidence 4678999988777655444445678899998 78766655 56789999998653221111110 01122234567
Q ss_pred eCCCCC-EEEEecc
Q 019290 254 SDSKGE-FWIAMNS 266 (343)
Q Consensus 254 ~d~~G~-lwi~~~~ 266 (343)
+.++|. ++++...
T Consensus 267 ~~~~~~~~l~~~~~ 280 (357)
T 3i2n_A 267 HLPQNRELFLTAGG 280 (357)
T ss_dssp EETTEEEEEEEEET
T ss_pred ECCCCCcEEEEEeC
Confidence 788887 4444433
No 196
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.66 E-value=3e-05 Score=70.11 Aligned_cols=169 Identities=15% Similarity=0.107 Sum_probs=102.3
Q ss_pred CCceEEEcC-CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCC-eEEEE
Q 019290 36 GPESLAFDC-NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTC-DLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~-~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~-~l~v~ 113 (343)
...++++.+ +|+.++++..+|.|..||..++............. . + ..........+..+++.+.++ .+..+
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--~--~--~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCS--I--G--RDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEE--E--C--TTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccc--c--c--ccccccCCCcEEEEEEccCCCcEEEEE
Confidence 567999999 99988888899999999987654221110000000 0 0 000011233567889987344 45555
Q ss_pred eCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCC--CCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCC
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPN--TGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKK 191 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~--dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 191 (343)
.....|..+|.++++........ ..+..+.+.+. ++.+.++... .+.|..+|..++
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~d~~~~ 176 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFE-----ETVYSHHMSPVSTKHCLVAVGTR-----------------GPKVQLCDLKSG 176 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECS-----SCEEEEEECSSCSSCCEEEEEES-----------------SSSEEEEESSSS
T ss_pred eCCCeEEEeeCCCCccceeccCC-----CceeeeEeecCCCCCcEEEEEcC-----------------CCeEEEEeCCCc
Confidence 44445999999887755443211 23455565542 1334443322 456888888766
Q ss_pred ceE-EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 192 NVT-VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 192 ~~~-~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
+.. .+.........+++++++..++++...++.|..|++..
T Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 177 SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 543 33333455788999999987666667789999999864
No 197
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.66 E-value=9.9e-06 Score=78.98 Aligned_cols=227 Identities=11% Similarity=0.012 Sum_probs=128.0
Q ss_pred CCCCe-eEEE-ecCCEEEEEEcC--C-CCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC--
Q 019290 44 CNGEG-PYVG-VSDGRILKWKAA--N-SGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY-- 116 (343)
Q Consensus 44 ~~g~~-l~~~-~~~g~i~~~d~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~-- 116 (343)
|||+. +.+. ..+.+|+.++.. + ++...+..... ........+++++++++.|+++...
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~---------------~~~~~~~~~~~~spDg~~l~~~~~~~~ 152 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSA---------------VGGGLRWADPVLLPERGEVWCMAEEFT 152 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCC---------------STTCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCcc---------------CCCCccccCcEECCCCCEEEEEEeccc
Confidence 88886 5443 346789999876 3 55444421000 0012245678899955667766432
Q ss_pred --------CeEEEEeCCC------CeEEEcc-cccCCCCccCcceeEEeCCCCe-EEEEeCCc-ccccccceeeeeecCC
Q 019290 117 --------FGLMVVGPNG------GQAQQLA-SSAGGIPFRFTNDLDIDPNTGI-VYFTDSSI-YFQRRQYFMSIATGDR 179 (343)
Q Consensus 117 --------~gi~~~d~~~------~~~~~~~-~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~-~~~~~~~~~~~~~~~~ 179 (343)
..|+.+|.++ ++.+.+. .. ......+++.+ ||+ |+++.... .. .-.
T Consensus 153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~Sp-DG~~la~~~~~~~~~-----------~~~ 215 (662)
T 3azo_A 153 GEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDA-----HRFVTGPRLSP-DGRQAVWLAWDHPRM-----------PWE 215 (662)
T ss_dssp SSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSC-----SSEECCCEECT-TSSEEEEEEECTTCC-----------TTT
T ss_pred CCCCCCceeEEEEEECCCCccccCCceeEEEecC-----CCcccCceECC-CCCEEEEEECCCCCC-----------CCC
Confidence 2499999988 6666553 21 13456788999 575 54433210 00 001
Q ss_pred CceEEEEeCC-CC---ceEEeecC-CCCcceeEEecCCCEEEEEEcCCC--eEEEEEccCccccccceeeecCC-C--C-
Q 019290 180 SGRLLKYDPL-KK---NVTVMYNG-LSFPNGVALSNNNSFLLLAESATL--KILRFWLQGERTTYTPQLFAEMP-R--F- 248 (343)
Q Consensus 180 ~~~v~~~d~~-~~---~~~~~~~~-~~~~~~i~~~~d~~~lyv~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~-~--~- 248 (343)
...|+.+|.+ ++ +.+.+... ......+++++||+ +|++...++ .|+++++++ ++.+.+.... . .
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~----~~~~~l~~~~~~~~~p 290 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT----GAATQLCRREEEFAGP 290 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTT----CCEEESSCCSSBSSCC
T ss_pred CcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCC----CceeecccccccccCc
Confidence 2468999887 46 55555443 34567788999999 666655555 899988754 2222222111 0 0
Q ss_pred -----CCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeE-E
Q 019290 249 -----PDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEV-Q 322 (343)
Q Consensus 249 -----p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~-~ 322 (343)
...+++.++|+++++... + ...|+.+|.++.....+..+.+ .+..+ .
T Consensus 291 ~w~~~~~~~~~~~~~~~~~~~~~-~----------------------~~~l~~~d~~~~~~~~l~~~~~----~~~~~~s 343 (662)
T 3azo_A 291 LWTPGMRWFAPLANGLIAVVHGK-G----------------------AAVLGILDPESGELVDAAGPWT----EWAATLT 343 (662)
T ss_dssp CCSTTCCSEEECTTSCEEEEEBS-S----------------------SCEEEEEETTTTEEEECCSSCC----EEEEEEE
T ss_pred cccccCceEeEeCCCEEEEEEEc-C----------------------ccEEEEEECCCCcEEEecCCCC----eEEEEEe
Confidence 234566678888777654 2 2377888877655555543322 22333 4
Q ss_pred EeCCEEEEecCC
Q 019290 323 EYGEYLYTGSSV 334 (343)
Q Consensus 323 ~~~g~l~i~~~~ 334 (343)
.+++.+++....
T Consensus 344 ~~~~~~~~~~~~ 355 (662)
T 3azo_A 344 VSGTRAVGVAAS 355 (662)
T ss_dssp EETTEEEEEEEE
T ss_pred cCCCEEEEEEcC
Confidence 456665554433
No 198
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.66 E-value=3.5e-05 Score=75.72 Aligned_cols=188 Identities=13% Similarity=0.091 Sum_probs=117.7
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||..++....... .....+..+++++++..|..+..
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~-------------------~h~~~v~~~~~s~~~~~l~s~s~ 492 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV-------------------GHTKDVLSVAFSLDNRQIVSASR 492 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------------------CCSSCEEEEEECTTSSCEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe-------------------CCCCCEEEEEEeCCCCEEEEEeC
Confidence 35689999999988889999999999987764332211 12234678999984445666644
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCC--eEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTG--IVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV 193 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg--~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 193 (343)
...|..+|..+.....+.....+ ....+..+++.+. + .+.++... .+.|..+|..+++.
T Consensus 493 D~~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~-~~~~~l~s~s~-----------------d~~v~vwd~~~~~~ 553 (694)
T 3dm0_A 493 DRTIKLWNTLGECKYTISEGGEG-HRDWVSCVRFSPN-TLQPTIVSASW-----------------DKTVKVWNLSNCKL 553 (694)
T ss_dssp TSCEEEECTTSCEEEEECSSTTS-CSSCEEEEEECSC-SSSCEEEEEET-----------------TSCEEEEETTTCCE
T ss_pred CCEEEEEECCCCcceeeccCCCC-CCCcEEEEEEeCC-CCcceEEEEeC-----------------CCeEEEEECCCCcE
Confidence 34488899865543333222111 1245778888883 4 34443322 45688888876665
Q ss_pred EE-eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 194 TV-MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 194 ~~-~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.. +..+......++++++++.+ ++...++.|..|++..... ...+ ........+++++++.+.++...
T Consensus 554 ~~~~~~h~~~v~~v~~spdg~~l-~sg~~Dg~i~iwd~~~~~~---~~~~-~~~~~v~~~~~sp~~~~l~~~~~ 622 (694)
T 3dm0_A 554 RSTLAGHTGYVSTVAVSPDGSLC-ASGGKDGVVLLWDLAEGKK---LYSL-EANSVIHALCFSPNRYWLCAATE 622 (694)
T ss_dssp EEEECCCSSCEEEEEECTTSSEE-EEEETTSBCEEEETTTTEE---EECC-BCSSCEEEEEECSSSSEEEEEET
T ss_pred EEEEcCCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCce---EEEe-cCCCcEEEEEEcCCCcEEEEEcC
Confidence 43 33334557889999999855 4555688999999865221 1111 12223445778888877776554
No 199
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.65 E-value=3.5e-05 Score=68.08 Aligned_cols=190 Identities=10% Similarity=0.038 Sum_probs=112.5
Q ss_pred CCceEEEcCCC-CeeEEEecCCEEEEEEcCCCCeE--EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 36 GPESLAFDCNG-EGPYVGVSDGRILKWKAANSGWT--EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 36 ~p~~l~~d~~g-~~l~~~~~~g~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
...++++.+++ +.+.++..++.|..|+..+.... ... .........+..+++.+++..|..
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~----------------~~~~~h~~~v~~~~~s~dg~~l~s 82 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPV----------------RSFKGHSHIVQDCTLTADGAYALS 82 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEE----------------EEEECCSSCEEEEEECTTSSEEEE
T ss_pred eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccc----------------eEEeCCcccEEEEEECCCCCEEEE
Confidence 46788999864 77788889999999986532111 000 000112234567889984444555
Q ss_pred EeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 113 ADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 113 ~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
+.....|..+|.++++........ ...+..+++.+ ++.+.++... .+.|..+|..+..
T Consensus 83 ~s~D~~v~~wd~~~~~~~~~~~~h----~~~v~~~~~~~-~~~~l~s~s~-----------------D~~i~vwd~~~~~ 140 (319)
T 3frx_A 83 ASWDKTLRLWDVATGETYQRFVGH----KSDVMSVDIDK-KASMIISGSR-----------------DKTIKVWTIKGQC 140 (319)
T ss_dssp EETTSEEEEEETTTTEEEEEEECC----SSCEEEEEECT-TSCEEEEEET-----------------TSCEEEEETTSCE
T ss_pred EeCCCEEEEEECCCCCeeEEEccC----CCcEEEEEEcC-CCCEEEEEeC-----------------CCeEEEEECCCCe
Confidence 543344899999988754332221 13478899999 5777765433 4567777876555
Q ss_pred eEEeecCCCCcceeEEecCCC-----EEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 193 VTVMYNGLSFPNGVALSNNNS-----FLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~d~~-----~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
...+.........+++.+... .++++...++.|..|++..... ...+.........++++++|++.++...
T Consensus 141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---~~~~~~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI---EADFIGHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE---EEEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh---heeecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 544444444456677766432 2455666788999999864211 1112111222345778999987776654
No 200
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.65 E-value=5.9e-05 Score=67.73 Aligned_cols=189 Identities=9% Similarity=0.096 Sum_probs=110.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||..++....... .....+..+++.+ ++..+++..
T Consensus 66 ~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-------------------~~~~~v~~~~~sp-~g~~lasg~ 125 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT-------------------MPCTWVMACAYAP-SGCAIACGG 125 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-------------------CSSSCCCEEEECT-TSSEEEEES
T ss_pred eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe-------------------cCCCCEEEEEECC-CCCEEEEee
Confidence 46789999999988899999999999987655433211 1122356788998 555444434
Q ss_pred CCe-EEEEeCCCCeEEEccccc--CCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 116 YFG-LMVVGPNGGQAQQLASSA--GGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 116 ~~g-i~~~d~~~~~~~~~~~~~--~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
.++ +..++............. .......+..+++.+ ++...++... .+.|..+|..+++
T Consensus 126 ~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~-----------------D~~v~lwd~~~~~ 187 (354)
T 2pbi_B 126 LDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASG-----------------DGTCALWDVESGQ 187 (354)
T ss_dssp TTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEET-----------------TSEEEEEETTTCC
T ss_pred CCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeC-----------------CCcEEEEeCCCCe
Confidence 444 666765432110000000 000123467788888 4655554332 4678888987776
Q ss_pred eEE-eecCCCCcceeEEec--CCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 193 VTV-MYNGLSFPNGVALSN--NNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 193 ~~~-~~~~~~~~~~i~~~~--d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
... +.........+++.+ ++.. +++...++.|..|++..... ...+.........+++.++|+++++...
T Consensus 188 ~~~~~~~h~~~v~~~~~~~~~~g~~-l~sgs~Dg~v~~wd~~~~~~---~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 188 LLQSFHGHGADVLCLDLAPSETGNT-FVSGGCDKKAMVWDMRSGQC---VQAFETHESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp EEEEEECCSSCEEEEEECCCSSCCE-EEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEcCCCCCeEEEEEEeCCCCCE-EEEEeCCCeEEEEECCCCcE---EEEecCCCCCeEEEEEeCCCCEEEEEeC
Confidence 543 333334456677766 3454 44556788999999865221 1222112222445778888887776654
No 201
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.65 E-value=6.2e-06 Score=74.57 Aligned_cols=189 Identities=8% Similarity=-0.002 Sum_probs=114.3
Q ss_pred CceEEEcCCCCeeEEEe--cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 37 PESLAFDCNGEGPYVGV--SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~--~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
...++++|||+.+.+++ .++.|..||..+++...-.. ....+.++++++ ++.++++.
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--------------------~~~~V~~v~fsp-dg~~l~s~ 194 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--------------------TRGEVKDLHFST-DGKVVAYI 194 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--------------------CSSCCCEEEECT-TSSEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--------------------CCCceEEEEEcc-CCceEEec
Confidence 45799999999766544 56889999998765432211 112367899999 66655554
Q ss_pred CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 115 AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
..+++.+++..+++....... .. ....+..+++.+ ++...++.... ......++.++.......
T Consensus 195 s~~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~v~fsp-dg~~l~~~s~d-------------~~~~~~i~~~~~~~~~~~ 258 (365)
T 4h5i_A 195 TGSSLEVISTVTGSCIARKTD-FD-KNWSLSKINFIA-DDTVLIAASLK-------------KGKGIVLTKISIKSGNTS 258 (365)
T ss_dssp CSSCEEEEETTTCCEEEEECC-CC-TTEEEEEEEEEE-TTEEEEEEEES-------------SSCCEEEEEEEEETTEEE
T ss_pred cceeEEEEEeccCcceeeeec-CC-CCCCEEEEEEcC-CCCEEEEEecC-------------CcceeEEeecccccceec
Confidence 567788888776654322111 11 123467889999 58877654321 011223555665433322
Q ss_pred -----EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEecc
Q 019290 195 -----VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 195 -----~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.+.........++++||++.|. +...++.|..|++.... ....+.. -.+....+++.|||++.++...
T Consensus 259 ~~~~~~~~~~~~~V~~~~~Spdg~~la-sgs~D~~V~iwd~~~~~---~~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 259 VLRSKQVTNRFKGITSMDVDMKGELAV-LASNDNSIALVKLKDLS---MSKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp EEEEEEEESSCSCEEEEEECTTSCEEE-EEETTSCEEEEETTTTE---EEEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred ceeeeeecCCCCCeEeEEECCCCCceE-EEcCCCEEEEEECCCCc---EEEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 2233344567899999998655 44567899999986421 1122211 1222455789999998887665
No 202
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.65 E-value=3.8e-05 Score=70.06 Aligned_cols=191 Identities=7% Similarity=-0.054 Sum_probs=119.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++.+ +++.++++..++.|..||........... ......+.++.+++++..|.++..
T Consensus 178 ~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------------------~~~~~~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 178 RVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTL------------------QGHSSEVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE------------------ECCSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEE------------------cCCCCCeeEEEEcCCCCEEEEEeC
Confidence 3456666 55678888899999999987432211110 122335678999984445666643
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...|..+|.++++........ ...+..+++.+.+..++++..+ ...+.|..||..+++...
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~p~~~~ll~~~~g---------------s~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNH----NAAVKAVAWCPWQSNLLATGGG---------------TMDKQIHFWNAATGARVN 298 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCC----SSCCCEEEECTTSTTEEEEECC---------------TTTCEEEEEETTTCCEEE
T ss_pred CCeEEEccCCCCCccEEecCC----cceEEEEEECCCCCCEEEEecC---------------CCCCEEEEEECCCCCEEE
Confidence 345999999876544322211 2357889999843456664421 115678899988776654
Q ss_pred eecCCCCcceeEEecCCCEEEEE-EcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLA-ESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
..........++++++++.++++ ...++.|..|++..... .....+....+....++++++|.+.++...
T Consensus 299 ~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 299 TVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL-TKQVDIPAHDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE-EEEEEEECCSSCCCEEEECTTSSEEEEECT
T ss_pred EEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc-eeEEEecCCCCCEEEEEECCCCCEEEEEeC
Confidence 44444567899999999977765 33678999999875322 111112122233566888999987776654
No 203
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.65 E-value=1.7e-05 Score=75.99 Aligned_cols=235 Identities=11% Similarity=0.055 Sum_probs=135.7
Q ss_pred CceEEEcC--CCCeeEEEecCCEEEEEEcCCC------CeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCC
Q 019290 37 PESLAFDC--NGEGPYVGVSDGRILKWKAANS------GWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTC 108 (343)
Q Consensus 37 p~~l~~d~--~g~~l~~~~~~g~i~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~ 108 (343)
..++++.+ +|+.++++..++.|..||..++ ....... .......+..+++++++.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~-----------------~~~~~~~v~~~~~s~~~~ 129 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSE-----------------FQVLAGPISDISWDFEGR 129 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEE-----------------EECCSSCEEEEEECTTSS
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccch-----------------hhcccccEEEEEEeCCCC
Confidence 57899999 9998888889999999988543 1111110 011223467899998445
Q ss_pred eEEEEeCC----CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceE
Q 019290 109 DLYIADAY----FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRL 183 (343)
Q Consensus 109 ~l~v~~~~----~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v 183 (343)
.|.++... ..|+.+|.. .....+ .. ....+..+++.+ ++. ++++... .+.|
T Consensus 130 ~l~~~~~~~~~~~~v~~~d~~-~~~~~~-~~----~~~~v~~~~~~~-~~~~~l~~~~~-----------------d~~v 185 (615)
T 1pgu_A 130 RLCVVGEGRDNFGVFISWDSG-NSLGEV-SG----HSQRINACHLKQ-SRPMRSMTVGD-----------------DGSV 185 (615)
T ss_dssp EEEEEECCSSCSEEEEETTTC-CEEEEC-CS----CSSCEEEEEECS-SSSCEEEEEET-----------------TTEE
T ss_pred EEEEeccCCCCccEEEEEECC-Ccceee-ec----CCccEEEEEECC-CCCcEEEEEeC-----------------CCcE
Confidence 56655433 136677732 223322 21 123578899999 475 4443322 4678
Q ss_pred EEEeCCCCceEEeec-CCC---CcceeEEecC-CCEEEEEEcCCCeEEEEEccCccccccceee-e---cCCCCCCceee
Q 019290 184 LKYDPLKKNVTVMYN-GLS---FPNGVALSNN-NSFLLLAESATLKILRFWLQGERTTYTPQLF-A---EMPRFPDNIKS 254 (343)
Q Consensus 184 ~~~d~~~~~~~~~~~-~~~---~~~~i~~~~d-~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-~---~~~~~p~~i~~ 254 (343)
..||..+++...... ... ....++++++ ++.++.. ..++.|..|++..... ...+ . ........+++
T Consensus 186 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~v~~~~~ 261 (615)
T 1pgu_A 186 VFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITV-GSDRKISCFDGKSGEF---LKYIEDDQEPVQGGIFALSW 261 (615)
T ss_dssp EEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEE-ETTCCEEEEETTTCCE---EEECCBTTBCCCSCEEEEEE
T ss_pred EEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEE-eCCCeEEEEECCCCCE---eEEecccccccCCceEEEEE
Confidence 888887666543332 333 5678999999 8766554 4578999999865221 1222 1 11122344667
Q ss_pred CCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CCEEEEeeCCCCCccCCceeEE-EeCCEEEEec
Q 019290 255 DSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGNEGNTLNSVSEVQ-EYGEYLYTGS 332 (343)
Q Consensus 255 d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~i~~ 332 (343)
. +|+++++... .+.+..+|.+ ++....+..+.......+..+. .+++.|..++
T Consensus 262 ~-~~~~l~~~~~------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 316 (615)
T 1pgu_A 262 L-DSQKFATVGA------------------------DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS 316 (615)
T ss_dssp S-SSSEEEEEET------------------------TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE
T ss_pred c-CCCEEEEEcC------------------------CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE
Confidence 7 8877666554 3467777864 6666666544222222333333 3455555554
Q ss_pred CCCCeEEEEc
Q 019290 333 SVQPYVVVIK 342 (343)
Q Consensus 333 ~~~~~i~~~~ 342 (343)
. ...|.+++
T Consensus 317 ~-~g~i~~~d 325 (615)
T 1pgu_A 317 L-DGTLNFYE 325 (615)
T ss_dssp T-TSCEEEEE
T ss_pred C-CCCEEEEE
Confidence 4 44555554
No 204
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.64 E-value=2.8e-05 Score=69.16 Aligned_cols=240 Identities=10% Similarity=-0.037 Sum_probs=137.9
Q ss_pred CCceEEEcCC----CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC-CCCeE
Q 019290 36 GPESLAFDCN----GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP-VTCDL 110 (343)
Q Consensus 36 ~p~~l~~d~~----g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~-~~~~l 110 (343)
...++++.++ |..++++..++.|..||..+++...... .....+..+.+++ +...|
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-------------------~~~~~i~~~~~~~~~~~~l 131 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV-------------------GHGNAINELKFHPRDPNLL 131 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE-------------------SCCSCEEEEEECSSCTTEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec-------------------CCCCcEEEEEECCCCCCEE
Confidence 4678888888 6678888899999999988765433211 1223467899987 44556
Q ss_pred EEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC
Q 019290 111 YIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK 190 (343)
Q Consensus 111 ~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 190 (343)
..+.....|..+|.++++.......... ....+..+++++ ++...++... .+.|..||..+
T Consensus 132 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~i~d~~~ 192 (366)
T 3k26_A 132 LSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDEVLSADYDL-LGEKIMSCGM-----------------DHSLKLWRINS 192 (366)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECSTTS-CSSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEESCS
T ss_pred EEEeCCCeEEEEEeecCeEEEEeccccc-ccCceeEEEECC-CCCEEEEecC-----------------CCCEEEEECCC
Confidence 6664434499999988765544321111 124578899999 4766554432 45677777765
Q ss_pred CceEEe-----------------------------ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCcccc-----
Q 019290 191 KNVTVM-----------------------------YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTT----- 236 (343)
Q Consensus 191 ~~~~~~-----------------------------~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~----- 236 (343)
++.... .........++++ ++ ++++...++.|..|++......
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~ 269 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIK 269 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCC
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccc
Confidence 432110 0022345667776 55 4555567899999997642110
Q ss_pred ---ccceeeec---CCCCCCceeeCCC--CCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CC----E
Q 019290 237 ---YTPQLFAE---MPRFPDNIKSDSK--GEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GN----V 303 (343)
Q Consensus 237 ---~~~~~~~~---~~~~p~~i~~d~~--G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~----~ 303 (343)
.....+.. .......+++.++ |++.++... .+.|..+|.+ ++ .
T Consensus 270 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~------------------------dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 270 PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ------------------------VGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT------------------------TSCEEEEECCSSSGGGCE
T ss_pred cCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec------------------------CCcEEEEECCCCCCcccc
Confidence 00011111 1122445666666 887776654 3466667754 32 3
Q ss_pred EEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 304 VDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
...+.... ....+..+... ++++.++......|.+++
T Consensus 326 ~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 326 CTTLTHHK--CGAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp EEEECCTT--CCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceEEcccc--cCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 33333221 12345555544 566666666666777765
No 205
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.63 E-value=2.1e-05 Score=71.67 Aligned_cols=194 Identities=14% Similarity=0.044 Sum_probs=115.7
Q ss_pred CCceEEEcC-CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCe-EEEE
Q 019290 36 GPESLAFDC-NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCD-LYIA 113 (343)
Q Consensus 36 ~p~~l~~d~-~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~-l~v~ 113 (343)
...++++.+ +++.+.++..++.|..||..++....-.... ..........+..+++++++.+ |+.+
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~------------~~~~~~h~~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREP------------VITLEGHTKRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSC------------SEEEECCSSCEEEEEECSSBTTEEEEE
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCc------------eEEecCCCCeEEEEEECcCCCCEEEEE
Confidence 467899999 8998888889999999998765211000000 0000122335678999984334 4555
Q ss_pred eCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV 193 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 193 (343)
.....|..+|.++++........ . ....+..+++.+ ++.++++... .+.|..||..+++.
T Consensus 151 ~~dg~i~iwd~~~~~~~~~~~~~-~-~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 151 GCDNVILVWDVGTGAAVLTLGPD-V-HPDTIYSVDWSR-DGALICTSCR-----------------DKRVRVIEPRKGTV 210 (402)
T ss_dssp ETTSCEEEEETTTTEEEEEECTT-T-CCSCEEEEEECT-TSSCEEEEET-----------------TSEEEEEETTTTEE
T ss_pred cCCCEEEEEECCCCCccEEEecC-C-CCCceEEEEECC-CCCEEEEEec-----------------CCcEEEEeCCCCce
Confidence 43334999999888654432101 1 124578899999 5776554432 46788999887765
Q ss_pred EEee-cCC--CCcceeEEecCCCEEEEEE--cCCCeEEEEEccCccccccceeee-cCCCCCCceeeCCCCCEEEE
Q 019290 194 TVMY-NGL--SFPNGVALSNNNSFLLLAE--SATLKILRFWLQGERTTYTPQLFA-EMPRFPDNIKSDSKGEFWIA 263 (343)
Q Consensus 194 ~~~~-~~~--~~~~~i~~~~d~~~lyv~~--~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~lwi~ 263 (343)
.... ... ..+..+++++++..+++.. ..++.|..|++..... ...... ........++++++|+..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE--PLSLQELDTSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS--CSEEEECCCCSSCEEEEEETTTTEEEE
T ss_pred eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC--CceEEeccCCCceeEEEEcCCCCEEEE
Confidence 4332 222 2367889999887554432 5678999999865221 111111 11222455778999876643
No 206
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.60 E-value=2.8e-05 Score=75.27 Aligned_cols=188 Identities=11% Similarity=0.047 Sum_probs=111.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCe-EEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCD-LYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~-l~v~~ 114 (343)
.|..++++|+|+.+.++. ++.+..++..+++..... ......+..+++++ ++. |..+.
T Consensus 20 ~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~-------------------~~h~~~v~~~~~sp-dg~~lasg~ 78 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIY-------------------TEHSHQTTVAKTSP-SGYYCASGD 78 (611)
T ss_dssp CCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEE-------------------CCCSSCEEEEEECT-TSSEEEEEE
T ss_pred ceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEe-------------------cCCCCceEEEEECC-CCcEEEEEe
Confidence 588999999999666554 568999998654332221 11223467899999 555 44454
Q ss_pred CCCeEEEEeCCCCeE--EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 115 AYFGLMVVGPNGGQA--QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~--~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
....|..+|.++++. ....... ...+.++++++ ||...++.... ....+.|+.+|.. ..
T Consensus 79 ~d~~v~lWd~~~~~~~~~~~~~~~----~~~v~~v~fs~-dg~~l~~~~~~-------------~~~~~~v~~wd~~-~~ 139 (611)
T 1nr0_A 79 VHGNVRIWDTTQTTHILKTTIPVF----SGPVKDISWDS-ESKRIAAVGEG-------------RERFGHVFLFDTG-TS 139 (611)
T ss_dssp TTSEEEEEESSSTTCCEEEEEECS----SSCEEEEEECT-TSCEEEEEECC-------------SSCSEEEEETTTC-CB
T ss_pred CCCCEEEeECCCCcceeeEeeccc----CCceEEEEECC-CCCEEEEEECC-------------CCceeEEEEeeCC-CC
Confidence 334488889864432 1111111 13578999999 57766543220 0012467777742 22
Q ss_pred eEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 193 VTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 193 ~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
...+.......+.++|+|++....++...++.|..|+..... ....+..-......+++.++|++.++...
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~---~~~~l~~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK---FKSTFGEHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE---EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe---EeeeeccccCceEEEEECCCCCEEEEEEC
Confidence 223333344578899999987656677778999999865311 11122111222345778999988777655
No 207
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.59 E-value=6.7e-05 Score=65.70 Aligned_cols=186 Identities=10% Similarity=-0.025 Sum_probs=110.9
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
..++++.++++.+.++..++.|..||..+++...... .....+..+++++++..|..+...
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~-------------------~h~~~v~~~~~~~~~~~l~sgs~D 118 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE-------------------AHPDYIRSIAVHPTKPYVLSGSDD 118 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE-------------------CCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe-------------------CCCCcEEEEEEcCCCCEEEEECCC
Confidence 5688899999988889999999999998765432211 122346789999844445555433
Q ss_pred CeEEEEeCCCC-eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE-
Q 019290 117 FGLMVVGPNGG-QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT- 194 (343)
Q Consensus 117 ~gi~~~d~~~~-~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 194 (343)
..|..+|.+++ ......... ...+..+++.|.++.++++... .+.|..||...+...
T Consensus 119 ~~v~lWd~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~sgs~-----------------D~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 119 LTVKLWNWENNWALEQTFEGH----EHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPNF 177 (304)
T ss_dssp SCEEEEEGGGTTEEEEEECCC----CSCEEEEEECTTCTTEEEEEET-----------------TSEEEEEETTCSSCSE
T ss_pred CeEEEEECCCCcchhhhhccc----CCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEECCCCCccc
Confidence 34889998765 322221111 1357889999843565554332 456777887544322
Q ss_pred EeecC-CCCcceeEEec--CCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 195 VMYNG-LSFPNGVALSN--NNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 195 ~~~~~-~~~~~~i~~~~--d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.+... ......+++.+ ++. +.++...++.|..|++..... ...+..-......+++.+++.+.++...
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~iWd~~~~~~---~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 248 (304)
T 2ynn_A 178 TLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKSC---VATLEGHMSNVSFAVFHPTLPIIISGSE 248 (304)
T ss_dssp EEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEEEETTTTEE---EEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred eeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEEEeCCCCcc---ceeeCCCCCCEEEEEECCCCCEEEEEcC
Confidence 22222 23345566665 455 445556789999999865211 1122111112334667888887776655
No 208
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.58 E-value=8.2e-05 Score=64.60 Aligned_cols=229 Identities=13% Similarity=0.020 Sum_probs=131.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCe-EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGW-TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
...++++.++++.++++..++.+..|+...... ..+ ............+.++ ++.++.+.
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-----------------~~~~~~~~~i~~~~~~--~~~l~~~~ 121 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPL-----------------YTLIGHQGNVCSLSFQ--DGVVISGS 121 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC------------------CEECCCSSCEEEEEEE--TTEEEEEE
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcc-----------------cchhhcccCEEEEEec--CCEEEEEe
Confidence 567899999999888889999999888654210 000 0001222345677775 56777775
Q ss_pred CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 115 AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
....+..+|. ++........ ...+..+++.+.++...++... .+.|..+|.. ....
T Consensus 122 ~d~~i~~~d~--~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~-~~~~ 177 (313)
T 3odt_A 122 WDKTAKVWKE--GSLVYNLQAH----NASVWDAKVVSFSENKFLTASA-----------------DKTIKLWQND-KVIK 177 (313)
T ss_dssp TTSEEEEEET--TEEEEEEECC----SSCEEEEEEEETTTTEEEEEET-----------------TSCEEEEETT-EEEE
T ss_pred CCCCEEEEcC--CcEEEecccC----CCceeEEEEccCCCCEEEEEEC-----------------CCCEEEEecC-ceEE
Confidence 5455888882 3332222211 1345666665522444443322 4568888843 2223
Q ss_pred Eeec-CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcccc
Q 019290 195 VMYN-GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIES 273 (343)
Q Consensus 195 ~~~~-~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~ 273 (343)
.+.. .......+++++++. +++...++.|..|++..... ...+....+....++++++|.+..++..
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~l~~~~~d------- 245 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGDV---LRTYEGHESFVYCIKLLPNGDIVSCGED------- 245 (313)
T ss_dssp EECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEEECTTSCEEEEETT-------
T ss_pred EEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchhh---hhhhhcCCceEEEEEEecCCCEEEEecC-------
Confidence 3332 345567889998886 44556788999999865221 1222222233456788999977766554
Q ss_pred ccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 274 NKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
+.|..+|. +++....+..+.. .+..+... ++++.. ......|.+++
T Consensus 246 ------------------g~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~-~~~dg~i~iw~ 293 (313)
T 3odt_A 246 ------------------RTVRIWSKENGSLKQVITLPAI----SIWSVDCMSNGDIIV-GSSDNLVRIFS 293 (313)
T ss_dssp ------------------SEEEEECTTTCCEEEEEECSSS----CEEEEEECTTSCEEE-EETTSCEEEEE
T ss_pred ------------------CEEEEEECCCCceeEEEeccCc----eEEEEEEccCCCEEE-EeCCCcEEEEe
Confidence 47778886 5777666654332 34444443 555444 44455666654
No 209
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.57 E-value=3.1e-05 Score=77.11 Aligned_cols=187 Identities=10% Similarity=-0.020 Sum_probs=116.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||..+++...... .....+..+++++++..|.++..
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-------------------~~~~~v~~~~~s~~~~~l~~~~~ 117 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE-------------------AHPDYIRSIAVHPTKPYVLSGSD 117 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE-------------------CCSSCEEEEEECSSSSEEEEEET
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-------------------cCCCCEEEEEEeCCCCEEEEEcC
Confidence 46799999999988888899999999988765432211 12234678999984446666654
Q ss_pred CCeEEEEeCCCC-eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 116 YFGLMVVGPNGG-QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 116 ~~gi~~~d~~~~-~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
...|..+|.+++ ......... ...+..+++.+.++.++++... .+.|..||..++...
T Consensus 118 dg~i~vw~~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~~l~~~~~-----------------dg~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 118 DLTVKLWNWENNWALEQTFEGH----EHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPN 176 (814)
T ss_dssp TSEEEEEEGGGTSEEEEEEECC----SSCEEEEEEETTEEEEEEEEET-----------------TSEEEEEETTCSSCS
T ss_pred CCEEEEEECCCCceEEEEEcCC----CCcEEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCcce
Confidence 445888998765 332222211 1347788898832555554322 467888887655432
Q ss_pred -EeecCC-CCcceeEEec--CCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 195 -VMYNGL-SFPNGVALSN--NNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 195 -~~~~~~-~~~~~i~~~~--d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.+.... .....+++++ ++..++. ...++.|..|++..... ...+....+....+++.++|.+.++...
T Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~dg~i~~~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 177 FTLTTGQERGVNYVDYYPLPDKPYMIT-ASDDLTIKIWDYQTKSC---VATLEGHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp EEEECCCTTCCCEEEECCSTTCCEEEE-ECTTSEEEEEETTTTEE---EEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred eEEecCCCCCEEEEEEEECCCCCEEEE-EeCCCEEEEEECCCCcE---EEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 222222 5567888888 7775554 45678999999765221 1222211222345677888876666544
No 210
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.56 E-value=3.2e-06 Score=81.33 Aligned_cols=179 Identities=10% Similarity=0.001 Sum_probs=103.0
Q ss_pred CceEEEcCCCCeeEEE-ecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 37 PESLAFDCNGEGPYVG-VSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
..++++++||+.+.+. ..++.+..|+.++++...+.. ........+++++ +..+|.++.
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~-------------------~~~~~~~~~~~sp-d~~l~~~~~ 83 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNR-------------------EPINSVLDPHYGV-GRVILVRDV 83 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCS-------------------SCCSEECEECTTC-SEEEEEEEC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeec-------------------ccccccccccCCC-CeEEEEecc
Confidence 5788999999966544 447777677766665544421 1111244566676 445565553
Q ss_pred --CC---eEEEEeC--CCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 116 --YF---GLMVVGP--NGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 116 --~~---gi~~~d~--~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
+. .++.++. +++.. .+... .+ .....+..|+ ++.++++... +.+..||.
T Consensus 84 ~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~---~~~~~~s~dg-~~~~~~s~~~------------------~~~~l~d~ 139 (582)
T 3o4h_A 84 SKGAEQHALFKVNTSRPGEEQ-RLEAV-KP---MRILSGVDTG-EAVVFTGATE------------------DRVALYAL 139 (582)
T ss_dssp STTSCCEEEEEEETTSTTCCE-ECTTS-CS---BEEEEEEECS-SCEEEEEECS------------------SCEEEEEE
T ss_pred CCCCcceEEEEEeccCCCccc-cccCC-CC---ceeeeeCCCC-CeEEEEecCC------------------CCceEEEc
Confidence 11 4777887 54433 33211 11 1123445555 2455554432 33446677
Q ss_pred CCCceEEeecCCCCcceeEEecCCCEEEEEEcC---CCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEec
Q 019290 189 LKKNVTVMYNGLSFPNGVALSNNNSFLLLAESA---TLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMN 265 (343)
Q Consensus 189 ~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~ 265 (343)
++++.+.+..... ...+++|||+.++.+... ...|+++++++ ++.+.+....+.....++++||+..++..
T Consensus 140 ~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~----g~~~~l~~~~~~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 140 DGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS----GGLRVFDSGEGSFSSASISPGMKVTAGLE 213 (582)
T ss_dssp ETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTT----CCCEEECCSSCEEEEEEECTTSCEEEEEE
T ss_pred cCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC----CCceEeecCCCccccceECCCCCEEEEcc
Confidence 7777766553322 788899999988765432 15699999876 33344433333345678899997655443
No 211
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.55 E-value=3.7e-05 Score=70.72 Aligned_cols=204 Identities=11% Similarity=0.098 Sum_probs=112.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCC------------eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSG------------WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF 103 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~ 103 (343)
...+++++++|+.+.++..+|.|..|+..++. ...+....... .+ .........+..+++
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~---~~-----~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEF---DY-----LKSLEIEEKINKIRW 101 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEE---EG-----GGTEEECCCCCEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccc---cc-----cccccccCceEEEEE
Confidence 57799999999988888899999999987654 11221000000 00 000000134678899
Q ss_pred eCCC--CeEEEEeCCCeEEEEeCCCCeEEEccc------------------------------------ccCCCCccCcc
Q 019290 104 NPVT--CDLYIADAYFGLMVVGPNGGQAQQLAS------------------------------------SAGGIPFRFTN 145 (343)
Q Consensus 104 ~~~~--~~l~v~~~~~gi~~~d~~~~~~~~~~~------------------------------------~~~~~~~~~~~ 145 (343)
.+++ ..+..+.....|..++..+++...... .........+.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 9843 345555433347778776543321000 00011224578
Q ss_pred eeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC-CceEE--------eecCCCCcceeEEecCCCEEE
Q 019290 146 DLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK-KNVTV--------MYNGLSFPNGVALSNNNSFLL 216 (343)
Q Consensus 146 ~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~~--------~~~~~~~~~~i~~~~d~~~ly 216 (343)
.+++.+ ++.++++. . .+.|..||... ++... +.........++++|++..++
T Consensus 182 ~~~~~~-~~~~l~s~-~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 242 (447)
T 3dw8_B 182 SISINS-DYETYLSA-D-----------------DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTF 242 (447)
T ss_dssp EEEECT-TSSEEEEE-C-----------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEE
T ss_pred EEEEcC-CCCEEEEe-C-----------------CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEE
Confidence 889999 57777654 2 45677888762 22221 112234467899999983345
Q ss_pred EEEcCCCeEEEEEccCccccc-cceeeecCCC------------CCCceeeCCCCCEEEEecc
Q 019290 217 LAESATLKILRFWLQGERTTY-TPQLFAEMPR------------FPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 217 v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~------------~p~~i~~d~~G~lwi~~~~ 266 (343)
++...++.|..|++....... ....+..... ....++++++|++.++...
T Consensus 243 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 243 VYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp EEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred EEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 555668899999987532100 1222221111 2345778999988776544
No 212
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.55 E-value=9.8e-05 Score=77.25 Aligned_cols=190 Identities=13% Similarity=0.043 Sum_probs=118.0
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+++++++|+.+.++..++.|..||..+++...-. ......+..+++++++..|..+..
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~-------------------~~h~~~v~~~~~s~~~~~l~s~~~ 677 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDI-------------------KAHEDEVLCCAFSSDDSYIATCSA 677 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-------------------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEe-------------------ccCCCCEEEEEEecCCCEEEEEeC
Confidence 4568899999998888889999999999876533221 122335678999984445555543
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCC-CeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNT-GIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~d-g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
...|..+|..+++........ ...+..+++.+.. +.+.++... .+.|..||..+++..
T Consensus 678 d~~v~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~sg~~-----------------d~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 678 DKKVKIWDSATGKLVHTYDEH----SEQVNCCHFTNKSNHLLLATGSN-----------------DFFLKLWDLNQKECR 736 (1249)
T ss_dssp TSEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSCCEEEEEET-----------------TSCEEEEETTSSSEE
T ss_pred CCeEEEEECCCCceEEEEcCC----CCcEEEEEEecCCCceEEEEEeC-----------------CCeEEEEECCCcchh
Confidence 345999999888654432221 1346778887731 334443322 456888898777654
Q ss_pred E-eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCcccccccee---eec-------CCCCCCceeeCCCCCEEEE
Q 019290 195 V-MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQL---FAE-------MPRFPDNIKSDSKGEFWIA 263 (343)
Q Consensus 195 ~-~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~---~~~-------~~~~p~~i~~d~~G~lwi~ 263 (343)
. +.........++++++++.+..+ +.++.|..|++........... ... .......++++++|+..++
T Consensus 737 ~~~~~h~~~v~~~~~sp~~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 815 (1249)
T 3sfz_A 737 NTMFGHTNSVNHCRFSPDDELLASC-SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIV 815 (1249)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEE-ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEE
T ss_pred heecCCCCCEEEEEEecCCCEEEEE-ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEE
Confidence 3 33344557889999999866544 5678999999875321011100 000 0112345677889987776
Q ss_pred ecc
Q 019290 264 MNS 266 (343)
Q Consensus 264 ~~~ 266 (343)
...
T Consensus 816 ~~~ 818 (1249)
T 3sfz_A 816 AAK 818 (1249)
T ss_dssp EET
T ss_pred EcC
Confidence 544
No 213
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.55 E-value=3.6e-06 Score=88.12 Aligned_cols=233 Identities=8% Similarity=0.009 Sum_probs=142.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+++++++|+.+.++..++.|..||..+++..... .....+..+.+.+ ++.++.+..
T Consensus 1005 ~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~l~~~~~ 1063 (1249)
T 3sfz_A 1005 AVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ--------------------AHQETVKDFRLLQ-DSRLLSWSF 1063 (1249)
T ss_dssp CCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCB--------------------CCSSCEEEEEECS-SSEEEEEES
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEe--------------------cCCCcEEEEEEcC-CCcEEEEEC
Confidence 4678999999998888889999999998876543221 1223456788888 778887765
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE-
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT- 194 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 194 (343)
...+..+|..+++........ ...+..+++.+ ++.++++... .+.|..||..+++..
T Consensus 1064 dg~v~vwd~~~~~~~~~~~~~----~~~v~~~~~s~-d~~~l~s~s~-----------------d~~v~iwd~~~~~~~~ 1121 (1249)
T 3sfz_A 1064 DGTVKVWNVITGRIERDFTCH----QGTVLSCAISS-DATKFSSTSA-----------------DKTAKIWSFDLLSPLH 1121 (1249)
T ss_dssp SSEEEEEETTTTCCCEEEECC----SSCCCCEEECS-SSSSCEEECC-----------------SSCCCEECSSSSSCSB
T ss_pred CCcEEEEECCCCceeEEEccc----CCcEEEEEECC-CCCEEEEEcC-----------------CCcEEEEECCCcceee
Confidence 556999999887643322221 13478899999 5776665433 456777777655532
Q ss_pred EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceee------ecCCCCCCceeeCCCCCEEEEeccCC
Q 019290 195 VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLF------AEMPRFPDNIKSDSKGEFWIAMNSAR 268 (343)
Q Consensus 195 ~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~p~~i~~d~~G~lwi~~~~~~ 268 (343)
.+.........++++++++.+..+ ..++.|..|++.+.......... ....+....++++++|++.++..+
T Consensus 1122 ~l~~h~~~v~~~~~s~dg~~lat~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g-- 1198 (1249)
T 3sfz_A 1122 ELKGHNGCVRCSAFSLDGILLATG-DDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG-- 1198 (1249)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEE-ETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESS--
T ss_pred eeccCCCcEEEEEECCCCCEEEEE-eCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCC--
Confidence 222233446789999999866554 56788999998753221111111 111223566889999987776543
Q ss_pred CccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 269 GKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
.+..+|. .++.+..+..... .+..+... +++..++......+.+++
T Consensus 1199 ------------------------~v~vwd~~~g~~~~~~~~~~~----~i~~~~~s~dg~~l~~~~~dg~v~vw~ 1246 (1249)
T 3sfz_A 1199 ------------------------YLKWWNVATGDSSQTFYTNGT----NLKKIHVSPDFRTYVTVDNLGILYILQ 1246 (1249)
T ss_dssp ------------------------SEEEBCSSSCBCCCCCCCSSC----CCCCCEECSSSCCEEEECTTCCEEEEC
T ss_pred ------------------------eEEEEECCCCceeeeeeccCC----cccEEEECCCCCEEEEecCCcEEEEEe
Confidence 5666775 4555444432221 22222222 455555555555666654
No 214
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.55 E-value=0.0003 Score=61.78 Aligned_cols=187 Identities=9% Similarity=0.055 Sum_probs=110.1
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..++........... ..........+.+.+..+..+..
T Consensus 88 ~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~s~s~ 148 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV-------------------GHTKDVLSVAFSSDNRQIVSGSR 148 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------------------CCSSCEEEEEECTTSSCEEEEET
T ss_pred CEEEEEECCCCCEEEEEcccccceEEeecccceeeeec-------------------CCCCceeEEEEeecCccceeecC
Confidence 46789999999988888999999999987654433221 11123445666664455666643
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCC-CCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPN-TGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
...+..+|............. ....+..+++.+. .+.+.++... .+.|..+|..+++..
T Consensus 149 d~~~~~~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~s~~~-----------------d~~i~i~d~~~~~~~ 208 (340)
T 4aow_A 149 DKTIKLWNTLGVCKYTVQDES---HSEWVSCVRFSPNSSNPIIVSCGW-----------------DKLVKVWNLANCKLK 208 (340)
T ss_dssp TSCEEEECTTSCEEEEECSSS---CSSCEEEEEECSCSSSCEEEEEET-----------------TSCEEEEETTTTEEE
T ss_pred CCeEEEEEeCCCceEEEEecc---ccCcccceEEccCCCCcEEEEEcC-----------------CCEEEEEECCCCcee
Confidence 344888887755433221111 1133455666542 1344443322 456888888776654
Q ss_pred Eee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 195 VMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 195 ~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
... ........++++++++.++. ...++.|..|++..... ...+ ........++..+++.+..+..+
T Consensus 209 ~~~~~h~~~v~~~~~s~~~~~l~s-~s~Dg~i~iwd~~~~~~---~~~~-~~~~~v~~~~~~~~~~~~~~~~d 276 (340)
T 4aow_A 209 TNHIGHTGYLNTVTVSPDGSLCAS-GGKDGQAMLWDLNEGKH---LYTL-DGGDIINALCFSPNRYWLCAATG 276 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEE-EETTCEEEEEETTTTEE---EEEE-ECSSCEEEEEECSSSSEEEEEET
T ss_pred eEecCCCCcEEEEEECCCCCEEEE-EeCCCeEEEEEeccCce---eeee-cCCceEEeeecCCCCceeeccCC
Confidence 333 23345678999999986554 45688999999865221 1111 11222344567777877766654
No 215
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.54 E-value=1.7e-05 Score=77.39 Aligned_cols=158 Identities=9% Similarity=-0.033 Sum_probs=96.7
Q ss_pred CCceEEEcCCCCeeEEEecC----------CEEEEEEcCC------CCeEEeeecCCCccccccCCCCCcccCCCcCCee
Q 019290 36 GPESLAFDCNGEGPYVGVSD----------GRILKWKAAN------SGWTEFATTAPHRAREICDGSTNTTLEPLCGRPL 99 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~----------g~i~~~d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 99 (343)
...++++++||+.+++...+ ..|+.+|..+ ++...+.. .......
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~-------------------~~~~~~~ 191 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD-------------------DAHRFVT 191 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC-------------------SCSSEEC
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEe-------------------cCCCccc
Confidence 35688999999977655443 4799999877 55443310 1112345
Q ss_pred eEEEeCCCCeEEEEeCC--------CeEEEEeCC-CC---eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCccccc
Q 019290 100 GIKFNPVTCDLYIADAY--------FGLMVVGPN-GG---QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQR 167 (343)
Q Consensus 100 gi~~~~~~~~l~v~~~~--------~gi~~~d~~-~~---~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~ 167 (343)
++.+++++..|+++... ..|+.+|.+ ++ +.+.+.... ...+..+++.+ ||+++++...
T Consensus 192 ~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~----~~~~~~~~~sp-dg~l~~~~~~----- 261 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP----EEAIAQAEWAP-DGSLIVATDR----- 261 (662)
T ss_dssp CCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET----TBCEEEEEECT-TSCEEEEECT-----
T ss_pred CceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC----CceEcceEECC-CCeEEEEECC-----
Confidence 67788855567665422 359999998 56 444443211 13466788999 6887776543
Q ss_pred ccceeeeeecCCCceEEEEeCCCCceEEeecCCCC---------cceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 168 RQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF---------PNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---------~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.....|+++|.++++.+.+...... ...++++++++.++.+......||++++++
T Consensus 262 ----------~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 262 ----------TGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp ----------TSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTT
T ss_pred ----------CCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCC
Confidence 1134799999877777665432111 346778778875555443345677777654
No 216
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.53 E-value=3.7e-06 Score=79.81 Aligned_cols=198 Identities=9% Similarity=-0.004 Sum_probs=122.8
Q ss_pred cccccccCCCCCCCceEEE-c-CCCCeeEEEe------------------cCCEEEEEEcCCCCeE-EeeecCCCccccc
Q 019290 24 KSYQQLQLPGVVGPESLAF-D-CNGEGPYVGV------------------SDGRILKWKAANSGWT-EFATTAPHRAREI 82 (343)
Q Consensus 24 ~~~~~~~~~~~~~p~~l~~-d-~~g~~l~~~~------------------~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~ 82 (343)
+..+.+++|....|+++++ . ++++.+|++. .++.+-.+|.++.+.. ++
T Consensus 123 ~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI----------- 191 (595)
T 1fwx_A 123 KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQV----------- 191 (595)
T ss_dssp EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEE-----------
T ss_pred eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEE-----------
Confidence 3345667886678999998 4 8888788773 2235667777764321 11
Q ss_pred cCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCC--------------------------------------eEEEEeC
Q 019290 83 CDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYF--------------------------------------GLMVVGP 124 (343)
Q Consensus 83 ~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~--------------------------------------gi~~~d~ 124 (343)
.-.+.|.++.++++++.+|+++... ++..+|.
T Consensus 192 ----------~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~ 261 (595)
T 1fwx_A 192 ----------LVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDG 261 (595)
T ss_dssp ----------EESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEEC
T ss_pred ----------EeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeC
Confidence 1123577888888666778775221 3555666
Q ss_pred CC--CeE-EEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc--------
Q 019290 125 NG--GQA-QQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN-------- 192 (343)
Q Consensus 125 ~~--~~~-~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-------- 192 (343)
++ ++. ...... ...|+++.++| ||+ +|+++.. ...|..+|.++.+
T Consensus 262 ~~~~~~~~~~~Ipv-----g~~PhGv~~sP-DGk~v~V~~~~-----------------s~~VsVid~~~~~~~~~~~l~ 318 (595)
T 1fwx_A 262 RKEASSLFTRYIPI-----ANNPHGCNMAP-DKKHLCVAGKL-----------------SPTVTVLDVTRFDAVFYENAD 318 (595)
T ss_dssp SGGGCCSSEEEEEE-----ESSCCCEEECT-TSSEEEEECTT-----------------SSBEEEEEGGGHHHHHHSCCC
T ss_pred cccCCceeEEEEec-----CCCceEEEEcC-CCCEEEEeCCC-----------------CCeEEEEECcccccccccccC
Confidence 54 221 111111 14689999999 576 6666544 5678888876432
Q ss_pred ----eEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccc-c---ccceeeecCC-----C---CCCceeeCC
Q 019290 193 ----VTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERT-T---YTPQLFAEMP-----R---FPDNIKSDS 256 (343)
Q Consensus 193 ----~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~-~---~~~~~~~~~~-----~---~p~~i~~d~ 256 (343)
+.....-...|..++|+++| .+|++...+++|.+|+++.... + ...+++..++ + ...++..++
T Consensus 319 ~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~ 397 (595)
T 1fwx_A 319 PRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA 397 (595)
T ss_dssp GGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC
T ss_pred cccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC
Confidence 22223345679999999999 8999999999999999875110 0 0012222111 1 125667899
Q ss_pred CCCEEEEecc
Q 019290 257 KGEFWIAMNS 266 (343)
Q Consensus 257 ~G~lwi~~~~ 266 (343)
||+..++.+.
T Consensus 398 DGk~l~~~Nk 407 (595)
T 1fwx_A 398 TNDWLVCLSK 407 (595)
T ss_dssp CSSEEEEEES
T ss_pred CCCEEEEcCC
Confidence 9987777665
No 217
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.53 E-value=0.00012 Score=70.70 Aligned_cols=82 Identities=13% Similarity=0.093 Sum_probs=52.5
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..||..+++......... .........+.++++++++..|..+..
T Consensus 192 ~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~------------~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS------------LKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT------------SSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeecccc------------ccccccCCCEEEEEECCCCCEEEEEeC
Confidence 46789999999978888899999999987765433211000 000012335778999983344555543
Q ss_pred CCeEEEEeCCCCeE
Q 019290 116 YFGLMVVGPNGGQA 129 (343)
Q Consensus 116 ~~gi~~~d~~~~~~ 129 (343)
...|..+|.++++.
T Consensus 260 D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 260 DKTIKIWNVATLKV 273 (611)
T ss_dssp TSEEEEEETTTTEE
T ss_pred CCeEEEEeCCCCce
Confidence 33488899887654
No 218
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.52 E-value=0.0002 Score=63.65 Aligned_cols=145 Identities=13% Similarity=0.043 Sum_probs=89.3
Q ss_pred CeeeEEEeC--CCCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeee
Q 019290 97 RPLGIKFNP--VTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSI 174 (343)
Q Consensus 97 ~p~gi~~~~--~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~ 174 (343)
.+..+++++ .+..+..+.....|..+|.++++......... ...+..+++.+ +|.+.++...
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~---~~~i~~~~~~p-dg~~lasg~~------------ 190 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS---DVEYSSGVLHK-DSLLLALYSP------------ 190 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS---SCCCCEEEECT-TSCEEEEECT------------
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC---CCceEEEEECC-CCCEEEEEcC------------
Confidence 456788887 55556556444449999998887643322211 13478899999 5887775433
Q ss_pred eecCCCceEEEEeCCCCceE--Eeec-CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCC-
Q 019290 175 ATGDRSGRLLKYDPLKKNVT--VMYN-GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPD- 250 (343)
Q Consensus 175 ~~~~~~~~v~~~d~~~~~~~--~~~~-~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~- 250 (343)
.+.|..||..+++.. .+.. .......+++++++..|..+. .+.|..||+...........+.. ...+-
T Consensus 191 -----dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~-~~~~~~ 262 (343)
T 3lrv_A 191 -----DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTI-PEFKTG 262 (343)
T ss_dssp -----TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC------C
T ss_pred -----CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeeccccc-cccccc
Confidence 567888898776643 3333 345678999999998776665 34999999875322111111110 11122
Q ss_pred --ceeeCCCCCEEEEec
Q 019290 251 --NIKSDSKGEFWIAMN 265 (343)
Q Consensus 251 --~i~~d~~G~lwi~~~ 265 (343)
.++++++|++.++..
T Consensus 263 ~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 263 TVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp CEEEEECTTSSEEEEEE
T ss_pred ceEEEECCCCCEEEEec
Confidence 388999998777643
No 219
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.52 E-value=7.3e-06 Score=80.71 Aligned_cols=145 Identities=12% Similarity=0.012 Sum_probs=92.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
.+.++++.+||++++. ..++.|+.+|..+++......... .....+..+++++++..|.++..
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~----------------~~~~~v~~~~~SpDg~~l~~~~~ 80 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKK----------------IESLRAIRYEISPDREYALFSYN 80 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTT----------------TTTTTCSEEEECTTSSEEEEEES
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEecccc----------------ccccccceEEECCCCCEEEEEec
Confidence 5889999999995555 577889999998876655432110 00013568899995455666633
Q ss_pred C---------CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 116 Y---------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 116 ~---------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
. ..++.+|.++++.+.+.... . ....+..+++.| ||+ |.++. .+.|+.
T Consensus 81 ~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-~-~~~~~~~~~~SP-dG~~la~~~-------------------~~~i~~ 138 (723)
T 1xfd_A 81 VEPIYQHSYTGYYVLSKIPHGDPQSLDPPE-V-SNAKLQYAGWGP-KGQQLIFIF-------------------ENNIYY 138 (723)
T ss_dssp CCCCSSSCCCSEEEEEESSSCCCEECCCTT-C-CSCCCSBCCBCS-STTCEEEEE-------------------TTEEEE
T ss_pred CccceeecceeeEEEEECCCCceEeccCCc-c-ccccccccEECC-CCCEEEEEE-------------------CCeEEE
Confidence 1 35889999988765553221 1 112366788888 575 44422 246889
Q ss_pred EeCCCCceEEeecCCC-------------------CcceeEEecCCCEEEEEE
Q 019290 186 YDPLKKNVTVMYNGLS-------------------FPNGVALSNNNSFLLLAE 219 (343)
Q Consensus 186 ~d~~~~~~~~~~~~~~-------------------~~~~i~~~~d~~~lyv~~ 219 (343)
+|..+++...+..... ...+++++|||+.|+++.
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred EECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 9888777655443211 225799999999887764
No 220
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.52 E-value=7.7e-05 Score=64.77 Aligned_cols=229 Identities=11% Similarity=0.027 Sum_probs=126.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++ ++++.++++..+|.|..||..++....... .....+..+++++++..|+++..
T Consensus 20 ~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~l~~~~~ 79 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY-------------------TGQGFLNSVCYDSEKELLLFGGK 79 (313)
T ss_dssp CEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE-------------------ECSSCEEEEEEETTTTEEEEEET
T ss_pred CcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee-------------------cCCccEEEEEECCCCCEEEEecC
Confidence 4678888 888888888999999999987765433221 11234678999985555666644
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...+..++............... ....+..+.+++ +.++.+.. .+.|..+|.. .....
T Consensus 80 dg~i~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~--~~l~~~~~------------------d~~i~~~d~~-~~~~~ 137 (313)
T 3odt_A 80 DTMINGVPLFATSGEDPLYTLIG-HQGNVCSLSFQD--GVVISGSW------------------DKTAKVWKEG-SLVYN 137 (313)
T ss_dssp TSCEEEEETTCCTTSCC-CEECC-CSSCEEEEEEET--TEEEEEET------------------TSEEEEEETT-EEEEE
T ss_pred CCeEEEEEeeecCCCCcccchhh-cccCEEEEEecC--CEEEEEeC------------------CCCEEEEcCC-cEEEe
Confidence 33477777654321111011111 113466777754 45555332 4567778822 22333
Q ss_pred eecCCCCcceeEEec-CCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEeccCCCcccc
Q 019290 196 MYNGLSFPNGVALSN-NNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAMNSARGKIES 273 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~~~~~~~~~~ 273 (343)
+.........+++.+ ++..++. ...++.|..|+... ....+.. .......+++.++|.+..+...
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d------- 204 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLT-ASADKTIKLWQNDK-----VIKTFSGIHNDVVRHLAVVDDGHFISCSND------- 204 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEE-EETTSCEEEEETTE-----EEEEECSSCSSCEEEEEEEETTEEEEEETT-------
T ss_pred cccCCCceeEEEEccCCCCEEEE-EECCCCEEEEecCc-----eEEEEeccCcccEEEEEEcCCCeEEEccCC-------
Confidence 333445566777777 6765554 45678999998322 1122221 2223445677888885555543
Q ss_pred ccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 274 NKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
+.|..+|. .++.+..+.... ..+..+... +++|+. ......|.+++
T Consensus 205 ------------------g~i~i~d~~~~~~~~~~~~~~----~~i~~~~~~~~~~l~~-~~~dg~v~iwd 252 (313)
T 3odt_A 205 ------------------GLIKLVDMHTGDVLRTYEGHE----SFVYCIKLLPNGDIVS-CGEDRTVRIWS 252 (313)
T ss_dssp ------------------SEEEEEETTTCCEEEEEECCS----SCEEEEEECTTSCEEE-EETTSEEEEEC
T ss_pred ------------------CeEEEEECCchhhhhhhhcCC----ceEEEEEEecCCCEEE-EecCCEEEEEE
Confidence 46667776 466665554322 234444433 444333 33344455443
No 221
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.51 E-value=9.1e-06 Score=74.01 Aligned_cols=189 Identities=8% Similarity=0.008 Sum_probs=111.5
Q ss_pred CCceEEEcCCCC-eeEEE----------ecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEe
Q 019290 36 GPESLAFDCNGE-GPYVG----------VSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFN 104 (343)
Q Consensus 36 ~p~~l~~d~~g~-~l~~~----------~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (343)
...++++.++|. ++.++ ..++.|..||..++..... .........+..++++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~-----------------~~~~~~~~~v~~~~~s 76 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP-----------------IASLQVDSKFNDLDWS 76 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC-----------------SCCCCCSSCEEEEEEC
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE-----------------EEEEecCCceEEEEEC
Confidence 467888999987 66676 5677889998876431100 0001123356789999
Q ss_pred CCCCeEEEEeCCCeEEEEeCCC----C-eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCC
Q 019290 105 PVTCDLYIADAYFGLMVVGPNG----G-QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 105 ~~~~~l~v~~~~~gi~~~d~~~----~-~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
+++..|..+.....|..++.++ . ....+ .. ....+..+++.+.++.++++...
T Consensus 77 ~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~-~~----h~~~v~~~~~~~~~~~~l~s~~~----------------- 134 (416)
T 2pm9_A 77 HNNKIIAGALDNGSLELYSTNEANNAINSMARF-SN----HSSSVKTVKFNAKQDNVLASGGN----------------- 134 (416)
T ss_dssp SSSSCEEEEESSSCEEEECCSSTTSCCCEEEEC-CC----SSSCCCEEEECSSSTTBEEEECS-----------------
T ss_pred CCCCeEEEEccCCeEEEeecccccccccchhhc-cC----CccceEEEEEcCCCCCEEEEEcC-----------------
Confidence 8444566664334488898876 2 22222 11 12357889999832565554432
Q ss_pred CceEEEEeCCCCc------eE-Ee---ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC----
Q 019290 180 SGRLLKYDPLKKN------VT-VM---YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM---- 245 (343)
Q Consensus 180 ~~~v~~~d~~~~~------~~-~~---~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~---- 245 (343)
.+.|..||..+++ .. .+ .........+++++++..++++...++.|..|++..... ...+...
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~ 211 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE---VIHLSYTSPNS 211 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE---EEEECCCCCSS
T ss_pred CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc---ceEEecccccc
Confidence 4568888877654 11 11 122345678999998555666667789999999875322 1111111
Q ss_pred --CCCCCceeeCCCC-CEEEEecc
Q 019290 246 --PRFPDNIKSDSKG-EFWIAMNS 266 (343)
Q Consensus 246 --~~~p~~i~~d~~G-~lwi~~~~ 266 (343)
......++++++| +++++...
T Consensus 212 ~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 212 GIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp CCCCCEEEEEECSSCTTEEEEEEC
T ss_pred ccCCceEEEEECCCCCCEEEEEEC
Confidence 2224457788887 55555444
No 222
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.51 E-value=2.1e-05 Score=69.56 Aligned_cols=226 Identities=13% Similarity=0.038 Sum_probs=135.6
Q ss_pred CCceEEEcCCCC-eeEEEecCCEEEEEEc-CCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 36 GPESLAFDCNGE-GPYVGVSDGRILKWKA-ANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~g~-~l~~~~~~g~i~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
...++++.++++ .++++..++.|..||. .+++...+... .....+..+++.+ ++.++.+
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~------------------~~~~~v~~l~~~~-~~~l~s~ 118 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN------------------EANLGICRICKYG-DDKLIAA 118 (342)
T ss_dssp CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSC------------------CCCSCEEEEEEET-TTEEEEE
T ss_pred ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecccc------------------CCCCceEEEEeCC-CCEEEEE
Confidence 577899999999 8999999999999998 87765443210 0223467899998 7777777
Q ss_pred eCCCeEEEEeCCC---------CeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEE
Q 019290 114 DAYFGLMVVGPNG---------GQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLL 184 (343)
Q Consensus 114 ~~~~gi~~~d~~~---------~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 184 (343)
.....|..+|.++ ++. +... . ....+..+++.+ ++ ++++.. .+.|.
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~-~--~~~~v~~~~~~~-~~-l~~~~~------------------d~~i~ 173 (342)
T 1yfq_A 119 SWDGLIEVIDPRNYGDGVIAVKNLN--SNNT-K--VKNKIFTMDTNS-SR-LIVGMN------------------NSQVQ 173 (342)
T ss_dssp ETTSEEEEECHHHHTTBCEEEEESC--SSSS-S--SCCCEEEEEECS-SE-EEEEES------------------TTEEE
T ss_pred cCCCeEEEEcccccccccccccCCe--eeEE-e--eCCceEEEEecC-Cc-EEEEeC------------------CCeEE
Confidence 6545588888764 221 1111 1 124577888888 35 665433 45688
Q ss_pred EEeCCC-Cc--eEEee-cCCCCcceeEEec-CCCEEEEEEcCCCeEEEEEccCc--cc-cccceeeecCC---------C
Q 019290 185 KYDPLK-KN--VTVMY-NGLSFPNGVALSN-NNSFLLLAESATLKILRFWLQGE--RT-TYTPQLFAEMP---------R 247 (343)
Q Consensus 185 ~~d~~~-~~--~~~~~-~~~~~~~~i~~~~-d~~~lyv~~~~~~~i~~~~~~~~--~~-~~~~~~~~~~~---------~ 247 (343)
.||..+ +. ..... ........+++++ +++.++++ ..++.|..|+++.. .. ......+.... .
T Consensus 174 i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (342)
T 1yfq_A 174 WFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS-SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252 (342)
T ss_dssp EEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE-ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCC
T ss_pred EEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE-ecCCcEEEEEEcCCCcccccccceeeecccccccccccce
Confidence 888765 33 22222 2234567889999 88866555 46889999887653 10 01111221111 1
Q ss_pred CCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CCEEEEeeCC-CCCccCCceeEEEeC
Q 019290 248 FPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGN-EGNTLNSVSEVQEYG 325 (343)
Q Consensus 248 ~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~-~~~~~~~~~~~~~~~ 325 (343)
....++++++|++.++... .+.|..+|.+ ++.+..+... . ..+..+..++
T Consensus 253 ~i~~~~~s~~~~~l~~~~~------------------------dg~i~vwd~~~~~~~~~~~~~h~----~~v~~~~~~~ 304 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGS------------------------DGIISCWNLQTRKKIKNFAKFNE----DSVVKIACSD 304 (342)
T ss_dssp CEEEEEECTTTCCEEEEET------------------------TSCEEEEETTTTEEEEECCCCSS----SEEEEEEECS
T ss_pred eEEEEEEcCCCCEEEEecC------------------------CceEEEEcCccHhHhhhhhcccC----CCceEecCCC
Confidence 2334678888876555544 3467778864 6655555432 2 2344434445
Q ss_pred CEEEEecCC
Q 019290 326 EYLYTGSSV 334 (343)
Q Consensus 326 g~l~i~~~~ 334 (343)
..|..++.+
T Consensus 305 ~~l~s~s~D 313 (342)
T 1yfq_A 305 NILCLATSD 313 (342)
T ss_dssp SEEEEEEEC
T ss_pred CeEEEEecC
Confidence 556555544
No 223
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.51 E-value=2.4e-05 Score=76.94 Aligned_cols=204 Identities=9% Similarity=-0.040 Sum_probs=111.5
Q ss_pred CCceEEEcCCCCeeEEEec---------CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 36 GPESLAFDCNGEGPYVGVS---------DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~---------~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
.+.+++++|||+.+.++.. .+.++.+|..+++...+.... .....+..++++++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-----------------~~~~~~~~~~~SPd 124 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE-----------------VSNAKLQYAGWGPK 124 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT-----------------CCSCCCSBCCBCSS
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc-----------------cccccccccEECCC
Confidence 3789999999996665544 278899999887654442110 11112456778885
Q ss_pred CCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCC--------------ccCcceeEEeCCCCe-EEEEeCCcccccccce
Q 019290 107 TCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIP--------------FRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYF 171 (343)
Q Consensus 107 ~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~--------------~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~ 171 (343)
+..|.++. ...|+.+|.++++...+........ ......+++.| ||+ |+++.... -....+.
T Consensus 125 G~~la~~~-~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~-~~~~~~~ 201 (723)
T 1xfd_A 125 GQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAIND-SRVPIME 201 (723)
T ss_dssp TTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEEC-TTSCEEE
T ss_pred CCEEEEEE-CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECC-CccceEE
Confidence 55676664 4679999998887665533211100 11236789999 576 44432110 0000000
Q ss_pred e------------eee---ec--CCCceEEEEeCCCCce-EEeecC------CCCcceeEEecCCCEEEEEEcC---CCe
Q 019290 172 M------------SIA---TG--DRSGRLLKYDPLKKNV-TVMYNG------LSFPNGVALSNNNSFLLLAESA---TLK 224 (343)
Q Consensus 172 ~------------~~~---~~--~~~~~v~~~d~~~~~~-~~~~~~------~~~~~~i~~~~d~~~lyv~~~~---~~~ 224 (343)
. .+. .+ .....|+.+|..+++. ..+... ......++++|||+.++..... ...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 281 (723)
T 1xfd_A 202 LPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSI 281 (723)
T ss_dssp ECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEE
T ss_pred eeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEE
Confidence 0 000 00 1123688999887764 333321 1224568899999876444322 257
Q ss_pred EEEEEccCccccccceeee-c-CCCC----CCceeeCCCCC-EEEE
Q 019290 225 ILRFWLQGERTTYTPQLFA-E-MPRF----PDNIKSDSKGE-FWIA 263 (343)
Q Consensus 225 i~~~~~~~~~~~~~~~~~~-~-~~~~----p~~i~~d~~G~-lwi~ 263 (343)
|+.+++.+. +..... . ..+. +..+++++||+ |+++
T Consensus 282 i~~~d~~~g----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 282 LTLCDATTG----VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EEEEETTTC----CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred EEEEeCCCC----cceEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 888887652 222221 1 1121 23678889986 5444
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.48 E-value=7e-06 Score=74.31 Aligned_cols=213 Identities=8% Similarity=-0.072 Sum_probs=117.8
Q ss_pred ccccccccCCC------CCCCceEEEcCCCCeeEEEec--CCEEEE--EEcCCCCeEEeeecCC---Ccc-----ccccC
Q 019290 23 SKSYQQLQLPG------VVGPESLAFDCNGEGPYVGVS--DGRILK--WKAANSGWTEFATTAP---HRA-----REICD 84 (343)
Q Consensus 23 ~~~~~~~~~~~------~~~p~~l~~d~~g~~l~~~~~--~g~i~~--~d~~~~~~~~~~~~~~---~~~-----~~~~~ 84 (343)
.+..+++.+|+ ...|+++++++||+.+|++.. ...+.. +|..+ ...+..... .+. ...|.
T Consensus 106 ~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 106 FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSC 183 (368)
T ss_dssp CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCC
T ss_pred CCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcC
Confidence 45567777762 247999999999998998754 345666 67755 333321000 000 00000
Q ss_pred -CC-------C-----Ccc------cCCCcCCeeeEEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEccc--ccCC---CC
Q 019290 85 -GS-------T-----NTT------LEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLAS--SAGG---IP 140 (343)
Q Consensus 85 -~~-------~-----~~~------~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~--~~~~---~~ 140 (343)
+. . .+. .......|. . .+.++.+|+.+. +.++.+|..++..+.... .... ..
T Consensus 184 dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~ 259 (368)
T 1mda_H 184 PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKAD 259 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHT
T ss_pred CCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccc
Confidence 00 0 000 000111233 3 443667777766 669999987543332211 1000 00
Q ss_pred ccCcce---eEEeCCCCeEEEEeC---CcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCE
Q 019290 141 FRFTND---LDIDPNTGIVYFTDS---SIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSF 214 (343)
Q Consensus 141 ~~~~~~---i~~d~~dg~l~v~~~---~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~ 214 (343)
...+.+ +++++..+++|++.. .... .. .+.+..+|.++++...-..-...|.++++++|++.
T Consensus 260 ~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~-----------~~-~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~ 327 (368)
T 1mda_H 260 NFRSAGFQMVAKLKNTDGIMILTVEHSRSCL-----------AA-AENTSSVTASVGQTSGPISNGHDSDAIIAAQDGAS 327 (368)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECSSCTT-----------SC-EEEEEEEESSSCCEEECCEEEEEECEEEECCSSSC
T ss_pred ccccCcceeeEEcCCCCEEEEEeccccCccc-----------cc-CCCEEEEECCCCeEEEEEECCCCcceEEECCCCCE
Confidence 112222 778884467998653 1000 00 13466899988776543333346999999999998
Q ss_pred EEEEEc-CCCeEEEEEccCccccccceeeecCCCCCCceeeCCC
Q 019290 215 LLLAES-ATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSK 257 (343)
Q Consensus 215 lyv~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 257 (343)
+|++.. ..+.|.++|+.+... .+.+ .....|.++++..+
T Consensus 328 l~va~~~~~~~VsVID~~t~kv---v~~I-~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 328 DNYANSAGTEVLDIYDAASDQD---QSSV-ELDKGPESLSVQNE 367 (368)
T ss_dssp EEEEEETTTTEEEEEESSSCEE---EEEC-CCCSCCCEEECCCC
T ss_pred EEEEccCCCCeEEEEECCCCcE---EEEE-ECCCCCCEEEeecC
Confidence 888887 689999999875221 1122 23456889887653
No 225
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.47 E-value=0.0001 Score=64.58 Aligned_cols=189 Identities=13% Similarity=0.064 Sum_probs=104.3
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCC--eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC--CCeEE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSG--WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV--TCDLY 111 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~~~l~ 111 (343)
...+++++++|+.+.++..++.|..||..++. ...... .......+..+++.+. +..|.
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----------------~~~~~~~v~~~~~~~~~d~~~l~ 75 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDS-----------------WRAHDSSIVAIDWASPEYGRIIA 75 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEE-----------------EECCSSCEEEEEECCGGGCSEEE
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecce-----------------eccCCCcEEEEEEcCCCCCCEEE
Confidence 57899999999988888899999999987542 111110 0122234678888873 34555
Q ss_pred EEeCCCeEEEEeCCCCeE-------EEcccccCCCCccCcceeEEeCCC--CeEEEEeCCcccccccceeeeeecCCCce
Q 019290 112 IADAYFGLMVVGPNGGQA-------QQLASSAGGIPFRFTNDLDIDPNT--GIVYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 112 v~~~~~gi~~~d~~~~~~-------~~~~~~~~~~~~~~~~~i~~d~~d--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
.+.....|..+|.++++. +.+.... . ....+..+++.+ + +.+.++... .+.
T Consensus 76 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~-~~~~~~l~~~~~-----------------dg~ 135 (351)
T 3f3f_A 76 SASYDKTVKLWEEDPDQEECSGRRWNKLCTLN-D-SKGSLYSVKFAP-AHLGLKLACLGN-----------------DGI 135 (351)
T ss_dssp EEETTSCEEEEEECTTSCTTSSCSEEEEEEEC-C-CSSCEEEEEECC-GGGCSEEEEEET-----------------TCE
T ss_pred EEcCCCeEEEEecCCCcccccccCcceeeeec-c-cCCceeEEEEcC-CCCCcEEEEecC-----------------CCc
Confidence 554333488888876531 1111111 1 123577888988 5 555543322 456
Q ss_pred EEEEeCCCCceEE-e-------------ecCCCCcceeEEecC---CCEEEEEEcCCCeEEEEEccCccccccceeeecC
Q 019290 183 LLKYDPLKKNVTV-M-------------YNGLSFPNGVALSNN---NSFLLLAESATLKILRFWLQGERTTYTPQLFAEM 245 (343)
Q Consensus 183 v~~~d~~~~~~~~-~-------------~~~~~~~~~i~~~~d---~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (343)
|..||..+++... + .........++++++ +..+.++ ..++.+..+.... .........
T Consensus 136 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~-~~~~~~~~~~~~~----~~~~~~~~~ 210 (351)
T 3f3f_A 136 LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVS-ALEQAIIYQRGKD----GKLHVAAKL 210 (351)
T ss_dssp EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEE-ETTEEEEEEECTT----SCEEEEEEC
T ss_pred EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEe-cCCCcEEEEccCC----Cceeeeeec
Confidence 8888866544210 0 012234567888886 6655554 4455664444332 121112222
Q ss_pred CC---CCCceeeCCCC----CEEEEecc
Q 019290 246 PR---FPDNIKSDSKG----EFWIAMNS 266 (343)
Q Consensus 246 ~~---~p~~i~~d~~G----~lwi~~~~ 266 (343)
.+ ....+++.++| +++++...
T Consensus 211 ~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 211 PGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp CCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred CCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 22 23446778876 55555444
No 226
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.46 E-value=2e-05 Score=78.38 Aligned_cols=192 Identities=13% Similarity=0.108 Sum_probs=113.5
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC--CCeEEEE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV--TCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~~~l~v~ 113 (343)
...+++++++|+.+.++..+|.|..||..++........ ......+..+++.++ ++.|..+
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l-----------------~~h~~~V~~l~~s~~~~~~~l~s~ 73 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-----------------TGHEGPVWRVDWAHPKFGTILASC 73 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEE-----------------CCCSSCEEEEEECCTTSCSEEEEE
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceec-----------------cCCcCceEEEEecCCCCCCEEEEE
Confidence 467889999999888888999999998764433322110 122234678888773 3345555
Q ss_pred eCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCC--CeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC
Q 019290 114 DAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNT--GIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK 190 (343)
Q Consensus 114 ~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~d--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 190 (343)
. .+| |..+|.++++......... ....+..+++.+ + +.++++... .+.|..||..+
T Consensus 74 s-~Dg~I~vwd~~~~~~~~~~~~~~--h~~~V~~v~~sp-~~~~~~l~sgs~-----------------dg~I~vwdl~~ 132 (753)
T 3jro_A 74 S-YDGKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAP-HEYGPLLLVASS-----------------DGKVSVVEFKE 132 (753)
T ss_dssp E-TTSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECC-GGGCSEEEEEET-----------------TSEEEEEECCS
T ss_pred e-CCCeEEEEECCCCcccccccccC--CCCCeEEEEECC-CCCCCEEEEEeC-----------------CCcEEEEEeec
Confidence 4 445 8899988876433322111 124578889988 5 555554322 46688888765
Q ss_pred Cc---eEEeecCCCCcceeEEec-------------CCCEEEEEEcCCCeEEEEEccCccccccc-eeeecCCCCCCcee
Q 019290 191 KN---VTVMYNGLSFPNGVALSN-------------NNSFLLLAESATLKILRFWLQGERTTYTP-QLFAEMPRFPDNIK 253 (343)
Q Consensus 191 ~~---~~~~~~~~~~~~~i~~~~-------------d~~~lyv~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~p~~i~ 253 (343)
+. ...+.........+++++ ++..++ +...++.|..|++......... ..+....+....++
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~-sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~ 211 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEE-EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEE-EEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEE
Confidence 52 222333344567888887 466554 4456789999998753210111 11111122234567
Q ss_pred eCCC---CCEEEEecc
Q 019290 254 SDSK---GEFWIAMNS 266 (343)
Q Consensus 254 ~d~~---G~lwi~~~~ 266 (343)
+.++ |++.++...
T Consensus 212 ~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQ 227 (753)
T ss_dssp ECCCCSSSEEEEEEES
T ss_pred eccCCCCCCEEEEEec
Confidence 7888 776666554
No 227
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.45 E-value=0.00022 Score=63.45 Aligned_cols=189 Identities=8% Similarity=-0.018 Sum_probs=108.9
Q ss_pred CCceEEE-----cC-CCCeeEEEecCCEEEEEEcCCCCe----EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC
Q 019290 36 GPESLAF-----DC-NGEGPYVGVSDGRILKWKAANSGW----TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP 105 (343)
Q Consensus 36 ~p~~l~~-----d~-~g~~l~~~~~~g~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~ 105 (343)
...++++ .+ ++..+.++..++.|..||..+.+. .... .........+..+++++
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~----------------~~l~~h~~~V~~~~~~~ 86 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPH----------------KALTGHNHFVSDLALSQ 86 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEE----------------EEECCCSSCEEEEEECS
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccccccccc----------------chhccCCCceEEEEECC
Confidence 3567777 55 888888888999999998764321 0000 00012223467889998
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 106 VTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 106 ~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
++..+..+.....|..+|.++++........ ...+..+++.+ +++..++... .+.|..
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h----~~~v~~v~~sp-~~~~l~s~~~-----------------d~~i~~ 144 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRTGTTYKRFVGH----QSEVYSVAFSP-DNRQILSAGA-----------------EREIKL 144 (343)
T ss_dssp STTEEEEEETTSEEEEEETTSSCEEEEEECC----CSCEEEEEECS-STTEEEEEET-----------------TSCEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC----CCcEEEEEECC-CCCEEEEEcC-----------------CCEEEE
Confidence 3334444543344889999887644322221 13578899999 5776654432 456777
Q ss_pred EeCCCCceEEee---cCCCCcceeEEecCCC---------EEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCcee
Q 019290 186 YDPLKKNVTVMY---NGLSFPNGVALSNNNS---------FLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIK 253 (343)
Q Consensus 186 ~d~~~~~~~~~~---~~~~~~~~i~~~~d~~---------~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~ 253 (343)
||.......... ........+++++++. .++++...++.|..|+... .....+.........++
T Consensus 145 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 145 WNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTFKAHESNVNHLS 220 (343)
T ss_dssp EESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEEECCSSCEEEEE
T ss_pred EeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEEcCccccceEEE
Confidence 776533322222 1223356677777652 2455556789999999433 11122222222244577
Q ss_pred eCCCCCEEEEecc
Q 019290 254 SDSKGEFWIAMNS 266 (343)
Q Consensus 254 ~d~~G~lwi~~~~ 266 (343)
++++|++.++...
T Consensus 221 ~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 221 ISPNGKYIATGGK 233 (343)
T ss_dssp ECTTSSEEEEEET
T ss_pred ECCCCCEEEEEcC
Confidence 8999987776554
No 228
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.44 E-value=0.00015 Score=71.10 Aligned_cols=190 Identities=9% Similarity=-0.004 Sum_probs=113.8
Q ss_pred CCceEEEcCCC-CeeEEEecCCEEEEEEcCCCCe--EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 36 GPESLAFDCNG-EGPYVGVSDGRILKWKAANSGW--TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 36 ~p~~l~~d~~g-~~l~~~~~~g~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
...+|++.+++ +++.++..++.|..|+..+... .... .........+..+++++++..|..
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~----------------~~~~~h~~~v~~v~~s~~g~~l~s 447 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQ----------------RRLTGHSHFVEDVVLSSDGQFALS 447 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEE----------------EEEECCSSCEEEEEECTTSSEEEE
T ss_pred eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccccc----------------ceecCCCCcEEEEEECCCCCEEEE
Confidence 36788888764 6677888999999998764321 0000 000122234678899984444555
Q ss_pred EeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 113 ADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 113 ~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
+.....|..+|..+++........ ...+.++++.+ +++..++... .+.|..+|..+..
T Consensus 448 gs~Dg~v~vwd~~~~~~~~~~~~h----~~~v~~~~~s~-~~~~l~s~s~-----------------D~~i~iwd~~~~~ 505 (694)
T 3dm0_A 448 GSWDGELRLWDLAAGVSTRRFVGH----TKDVLSVAFSL-DNRQIVSASR-----------------DRTIKLWNTLGEC 505 (694)
T ss_dssp EETTSEEEEEETTTTEEEEEEECC----SSCEEEEEECT-TSSCEEEEET-----------------TSCEEEECTTSCE
T ss_pred EeCCCcEEEEECCCCcceeEEeCC----CCCEEEEEEeC-CCCEEEEEeC-----------------CCEEEEEECCCCc
Confidence 543344899999887654332221 13478899999 5776665433 4567778865443
Q ss_pred eEEeec----CCCCcceeEEecCCC-EEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 193 VTVMYN----GLSFPNGVALSNNNS-FLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 193 ~~~~~~----~~~~~~~i~~~~d~~-~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
...+.. .......+++++++. .++++...++.|..|++..... ...+....+....++++++|++.++...
T Consensus 506 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~---~~~~~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 506 KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL---RSTLAGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE---EEEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 333322 122357788888763 3556666789999999865221 1122112223445788999988777655
No 229
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.43 E-value=0.00011 Score=65.28 Aligned_cols=99 Identities=14% Similarity=0.096 Sum_probs=65.2
Q ss_pred CCceEEEcCC---CCeeEEEecCCEEEEEEcCC-CCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 36 GPESLAFDCN---GEGPYVGVSDGRILKWKAAN-SGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 36 ~p~~l~~d~~---g~~l~~~~~~g~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
...++++.++ |+.++++..++.|..||..+ +... .... .....+..+++++++..|
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-------------------~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ-------------------MHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE-------------------ECSSCEEEEEECTTSSEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec-------------------cccCCEEEEEECcCCCEE
Confidence 5789999999 58788888999999999876 3322 1110 122346789999844456
Q ss_pred EEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEE--eCCCCeEEEE
Q 019290 111 YIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDI--DPNTGIVYFT 159 (343)
Q Consensus 111 ~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~--d~~dg~l~v~ 159 (343)
+.+.....|..+|.++++...+.. . ...+..+++ .+ ++.++++
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~~~~-~----~~~v~~~~~~~~~-~~~~l~~ 146 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQIAQ-H----DAPVKTIHWIKAP-NYSCVMT 146 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE-C----SSCEEEEEEEECS-SCEEEEE
T ss_pred EEEcCCCcEEEEEcCCCCceeecc-c----cCceEEEEEEeCC-CCCEEEE
Confidence 666544449999999887665422 1 134677777 77 4665554
No 230
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.41 E-value=5.4e-05 Score=76.81 Aligned_cols=183 Identities=11% Similarity=0.028 Sum_probs=116.7
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+++++++|+++.++..+|.|..|+..+.+..... .....+..+++.+ +..|..+..
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~--------------------~~~~~V~~l~fsp-g~~L~S~s~ 77 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL--------------------EDRSAIKEMRFVK-GIYLVVINA 77 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC--------------------SSCCCEEEEEEET-TTEEEEEET
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc--------------------CCCCCEEEEEEcC-CCEEEEEEC
Confidence 5789999999998888999999999987765432211 1123467899998 555666654
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...|..+|.++++...... . ...+..+++++. +...++... .+.|..||.++++...
T Consensus 78 D~~v~lWd~~~~~~~~~~~-~----~~~V~~v~~sp~-g~~l~sgs~-----------------dg~V~lwd~~~~~~~~ 134 (902)
T 2oaj_A 78 KDTVYVLSLYSQKVLTTVF-V----PGKITSIDTDAS-LDWMLIGLQ-----------------NGSMIVYDIDRDQLSS 134 (902)
T ss_dssp TCEEEEEETTTCSEEEEEE-C----SSCEEEEECCTT-CSEEEEEET-----------------TSCEEEEETTTTEEEE
T ss_pred cCeEEEEECCCCcEEEEEc-C----CCCEEEEEECCC-CCEEEEEcC-----------------CCcEEEEECCCCcccc
Confidence 4559999998776432221 1 134788999994 665443322 4678888887766431
Q ss_pred e------------ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecC------------------
Q 019290 196 M------------YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEM------------------ 245 (343)
Q Consensus 196 ~------------~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~------------------ 245 (343)
+ .........++++|++..+.++...++.| .|++..... ...+...
T Consensus 135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI---KQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE---EEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce---EEEEecccCCcCCCccccccccccc
Confidence 1 11223567899999754455566678888 999875322 1111100
Q ss_pred CCCCCceeeCCCCCEEEEecc
Q 019290 246 PRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 246 ~~~p~~i~~d~~G~lwi~~~~ 266 (343)
......+++.++|++.++...
T Consensus 211 ~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 211 TPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp CCCEEEEEECTTSSEEEEEET
T ss_pred CCCeEEEEEcCCCCEEEEEEC
Confidence 011234677899987777665
No 231
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.41 E-value=3.1e-05 Score=71.49 Aligned_cols=197 Identities=11% Similarity=0.043 Sum_probs=119.2
Q ss_pred CCceEEEcCCCC-eeEEEecCCEEEEEEcCCCCe--EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE
Q 019290 36 GPESLAFDCNGE-GPYVGVSDGRILKWKAANSGW--TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI 112 (343)
Q Consensus 36 ~p~~l~~d~~g~-~l~~~~~~g~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v 112 (343)
.+.++++.+++. .+.++..+|.|..|+..+... ..+... .........+..+++++.++.+++
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--------------~~~~~h~~~v~~v~~~p~~~~~l~ 248 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAK--------------NIFTGHTAVVEDVAWHLLHESLFG 248 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECS--------------EEECCCSSCEEEEEECSSCTTEEE
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccc--------------eeecCCCCCEeeeEEeCCCCCEEE
Confidence 468999999987 788888999999999876321 000000 000122334678999884555555
Q ss_pred EeCCC-eEEEEeCCCCeE-EEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCC
Q 019290 113 ADAYF-GLMVVGPNGGQA-QQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL 189 (343)
Q Consensus 113 ~~~~~-gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 189 (343)
+.... .|..+|.+++.. +.+... . .....++.+++.+. +. ++++... .+.|..||..
T Consensus 249 s~~~dg~i~i~d~~~~~~~~~~~~~-~-~~~~~v~~i~~~p~-~~~~l~tg~~-----------------dg~v~vwd~~ 308 (430)
T 2xyi_A 249 SVADDQKLMIWDTRNNNTSKPSHTV-D-AHTAEVNCLSFNPY-SEFILATGSA-----------------DKTVALWDLR 308 (430)
T ss_dssp EEETTSEEEEEETTCSCSSSCSEEE-E-CCSSCEEEEEECSS-CTTEEEEEET-----------------TSEEEEEETT
T ss_pred EEeCCCeEEEEECCCCCCCcceeEe-e-cCCCCeEEEEeCCC-CCCEEEEEeC-----------------CCeEEEEeCC
Confidence 43444 499999986521 111111 0 11245788999994 65 5654332 4678888876
Q ss_pred CC-c-eEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccc--------cceeeecC---CCCCCceeeCC
Q 019290 190 KK-N-VTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTY--------TPQLFAEM---PRFPDNIKSDS 256 (343)
Q Consensus 190 ~~-~-~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~---~~~p~~i~~d~ 256 (343)
.. . +..+.........++++++++.++++....+.|..|++....... ..+.+... ...+..+++++
T Consensus 309 ~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 388 (430)
T 2xyi_A 309 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 388 (430)
T ss_dssp CTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS
T ss_pred CCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECC
Confidence 42 2 334444445678899999998788887788999999986521100 01122111 22355678889
Q ss_pred CCC-EEEEecc
Q 019290 257 KGE-FWIAMNS 266 (343)
Q Consensus 257 ~G~-lwi~~~~ 266 (343)
+|. ++++...
T Consensus 389 ~~~~~l~s~s~ 399 (430)
T 2xyi_A 389 NEPWIICSVSE 399 (430)
T ss_dssp SSTTEEEEEET
T ss_pred CCCCEEEEEEC
Confidence 887 6666554
No 232
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.41 E-value=0.00018 Score=62.61 Aligned_cols=157 Identities=13% Similarity=0.048 Sum_probs=93.5
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCC---eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC-CCe-E
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSG---WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV-TCD-L 110 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~-~~~-l 110 (343)
...+++++++|+.+.++..++.|..||..+.. ...+ ......+..+++.++ ++. |
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l--------------------~gH~~~V~~v~~s~~~~g~~l 70 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL--------------------TGHEGPVWRVDWAHPKFGTIL 70 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE--------------------CCCSSCEEEEEECCGGGCSEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE--------------------ccccCCeEEEEecCCCcCCEE
Confidence 45789999999988888899999999876432 1122 122234677888642 244 4
Q ss_pred EEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCC--CeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 111 YIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNT--GIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 111 ~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~d--g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
..+.....|..+|.++++...+... .. ....++.+++.+ + |.+.++... .+.|..+|.
T Consensus 71 ~s~s~D~~v~iWd~~~~~~~~~~~~-~~-h~~~v~~v~~~p-~~~g~~l~s~s~-----------------d~~v~~wd~ 130 (297)
T 2pm7_B 71 ASCSYDGKVMIWKEENGRWSQIAVH-AV-HSASVNSVQWAP-HEYGPMLLVASS-----------------DGKVSVVEF 130 (297)
T ss_dssp EEEETTTEEEEEEBSSSCBCCCEEE-CC-CSSCEEEEEECC-GGGCSEEEEEET-----------------TSEEEEEEB
T ss_pred EEEcCCCEEEEEEcCCCceEEEEEe-ec-CCCceeEEEeCc-CCCCcEEEEEEC-----------------CCcEEEEEe
Confidence 4444334488899887643222111 11 113577888887 3 555553322 455666776
Q ss_pred CCCc---eEEeecCCCCcceeEEecCC------------CEEEEEEcCCCeEEEEEccC
Q 019290 189 LKKN---VTVMYNGLSFPNGVALSNNN------------SFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 189 ~~~~---~~~~~~~~~~~~~i~~~~d~------------~~lyv~~~~~~~i~~~~~~~ 232 (343)
.++. ...+.........++++|++ ..++++...++.|..|++..
T Consensus 131 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~ 189 (297)
T 2pm7_B 131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (297)
T ss_dssp CSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEET
T ss_pred cCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC
Confidence 5432 22233333456677887752 22455666788999999865
No 233
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.40 E-value=5.9e-05 Score=66.87 Aligned_cols=185 Identities=13% Similarity=-0.002 Sum_probs=104.9
Q ss_pred CCceEEEcCCCCeeE-EEec---CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC---CC
Q 019290 36 GPESLAFDCNGEGPY-VGVS---DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV---TC 108 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~-~~~~---~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~~ 108 (343)
...++++.+++..+. ++.. ++.|..||..+++....... .....+..+++.++ +.
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~~~ 81 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI------------------EKAKPIKCGTFGATSLQQR 81 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE------------------EESSCEEEEECTTCCTTTC
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee------------------cccCcEEEEEEcCCCCCCc
Confidence 578999999997555 4444 88999999988765433210 11224567888884 25
Q ss_pred eEEEEeCCCeEEEEeCCCCe--EEEcccccCCCCccCccee------EEeCCCCeEEEEeCCcccccccceeeeeecCCC
Q 019290 109 DLYIADAYFGLMVVGPNGGQ--AQQLASSAGGIPFRFTNDL------DIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRS 180 (343)
Q Consensus 109 ~l~v~~~~~gi~~~d~~~~~--~~~~~~~~~~~~~~~~~~i------~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
.|+.+.....|..+|.++++ ...+ ... ...+..+ ++.+ ++.+.++... .
T Consensus 82 ~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~----~~~v~~~~~~~~~~~s~-~~~~l~~~~~-----------------d 138 (357)
T 3i2n_A 82 YLATGDFGGNLHIWNLEAPEMPVYSV-KGH----KEIINAIDGIGGLGIGE-GAPEIVTGSR-----------------D 138 (357)
T ss_dssp CEEEEETTSCEEEECTTSCSSCSEEE-CCC----SSCEEEEEEESGGGCC--CCCEEEEEET-----------------T
T ss_pred eEEEecCCCeEEEEeCCCCCccEEEE-Eec----ccceEEEeeccccccCC-CccEEEEEeC-----------------C
Confidence 56666544449999988765 2222 111 1234555 3456 4665554332 4
Q ss_pred ceEEEEeCCCCc--eEEeecCC----CCcceeE----EecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCC
Q 019290 181 GRLLKYDPLKKN--VTVMYNGL----SFPNGVA----LSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPD 250 (343)
Q Consensus 181 ~~v~~~d~~~~~--~~~~~~~~----~~~~~i~----~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~ 250 (343)
+.|..||..+++ ...+.... .....++ +++++..++.+ ..++.|..|++... .............
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~----~~~~~~~~~~~v~ 213 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG-YDNGDIKLFDLRNM----ALRWETNIKNGVC 213 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE-ETTSEEEEEETTTT----EEEEEEECSSCEE
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE-ccCCeEEEEECccC----ceeeecCCCCceE
Confidence 568888877654 23322111 1234455 56788766554 46789999998752 2222222233345
Q ss_pred ceeeCC---CCCEEEEecc
Q 019290 251 NIKSDS---KGEFWIAMNS 266 (343)
Q Consensus 251 ~i~~d~---~G~lwi~~~~ 266 (343)
.+++++ +++..++...
T Consensus 214 ~~~~~~~~~~~~~l~~~~~ 232 (357)
T 3i2n_A 214 SLEFDRKDISMNKLVATSL 232 (357)
T ss_dssp EEEESCSSSSCCEEEEEES
T ss_pred EEEcCCCCCCCCEEEEECC
Confidence 677887 7766665544
No 234
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.40 E-value=6.6e-05 Score=77.38 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=97.4
Q ss_pred CceEEEcCCCCeeEEEecCCEEE-EEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRIL-KWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
+.++++. +|+.+++...+.+++ .++..+++...+. .....+..+++++++..|.++..
T Consensus 340 ~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~--------------------~~~~~~~~~~~SpDG~~la~~~~ 398 (1045)
T 1k32_A 340 YVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE--------------------ENLGNVFAMGVDRNGKFAVVAND 398 (1045)
T ss_dssp EEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC--------------------CCCCSEEEEEECTTSSEEEEEET
T ss_pred EEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec--------------------CCccceeeeEECCCCCEEEEECC
Confidence 4567778 887666655677888 8888776554432 12234678899995556777765
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
...++.+|.++++.+.+..... ..+..+++.| ||+..+...... ++.+ .......|+.+|.++++...
T Consensus 399 ~~~v~~~d~~tg~~~~~~~~~~----~~v~~~~~Sp-DG~~la~~~~~~----~~~~---~~~~~~~i~l~d~~~g~~~~ 466 (1045)
T 1k32_A 399 RFEIMTVDLETGKPTVIERSRE----AMITDFTISD-NSRFIAYGFPLK----HGET---DGYVMQAIHVYDMEGRKIFA 466 (1045)
T ss_dssp TSEEEEEETTTCCEEEEEECSS----SCCCCEEECT-TSCEEEEEEEEC----SSTT---CSCCEEEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCceEEeccCCC----CCccceEECC-CCCeEEEEecCc----cccc---cCCCCCeEEEEECCCCcEEE
Confidence 5569999999988776542221 2357889999 577443221100 0000 00113469999998887666
Q ss_pred eecCCCCcceeEEecCCCEEEEEEc
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLAES 220 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~~~ 220 (343)
+.........+++++||+.||+...
T Consensus 467 l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 467 ATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CSCSSSBEEEEEECTTSCEEEEEES
T ss_pred eeCCCcccCCceEcCCCCEEEEEec
Confidence 5555555677899999999988764
No 235
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.40 E-value=1.3e-05 Score=72.48 Aligned_cols=185 Identities=11% Similarity=0.027 Sum_probs=104.2
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeee--E---------------
Q 019290 39 SLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLG--I--------------- 101 (343)
Q Consensus 39 ~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g--i--------------- 101 (343)
.+.++++|+.+++...++.|+.+|..+++...+...... ..+.| +
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~------------------~~~~g~~l~~~~~~~~~~~~~~~ 146 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE------------------WKGYGTWVANSDCTKLVGIEILK 146 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT------------------EEEEEEEEECTTSSEEEEEEEEG
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc------------------cCCCCCEEEeccCCccccccccc
Confidence 378899999776666777899999988776655431110 00111 1
Q ss_pred -EEeCCCCeEEEE-----eCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeC-CCCeEEEEeCCcccccccceeee
Q 019290 102 -KFNPVTCDLYIA-----DAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDP-NTGIVYFTDSSIYFQRRQYFMSI 174 (343)
Q Consensus 102 -~~~~~~~~l~v~-----~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~dg~l~v~~~~~~~~~~~~~~~~ 174 (343)
.+.++++.+.++ .....|+.+|.++++.+.+... ...+..+++.+ .++.+++......
T Consensus 147 ~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~-----~~~~~~~~~sp~dg~~l~~~~~~~~---------- 211 (396)
T 3c5m_A 147 RDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD-----TAWLGHPIYRPFDDSTVGFCHEGPH---------- 211 (396)
T ss_dssp GGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE-----SSCEEEEEEETTEEEEEEEEECSCS----------
T ss_pred cccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC-----CcccccceECCCCCCEEEEEecCCC----------
Confidence 123322223222 1223589999988877665421 12356677877 3233555432200
Q ss_pred eecCCCceEEEEeCCCCceEEeecC--CCCcceeEEecCCCEEEEEEcC--C--CeEEEEEccCccccccceeeecCCCC
Q 019290 175 ATGDRSGRLLKYDPLKKNVTVMYNG--LSFPNGVALSNNNSFLLLAESA--T--LKILRFWLQGERTTYTPQLFAEMPRF 248 (343)
Q Consensus 175 ~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~i~~~~d~~~lyv~~~~--~--~~i~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
......|+.+|.++++.+.+... ......++++|||+.|+++... . +.|+++++.+ ++.+.+...++.
T Consensus 212 --~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~----g~~~~l~~~~~~ 285 (396)
T 3c5m_A 212 --DLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET----LENEEVMVMPPC 285 (396)
T ss_dssp --SSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT----CCEEEEEECCSE
T ss_pred --CCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC----CCeEEeeeCCCC
Confidence 00014699999877766555432 1234567899999877665332 2 3499999865 222333222221
Q ss_pred CCceeeCC-CCCEEEEe
Q 019290 249 PDNIKSDS-KGEFWIAM 264 (343)
Q Consensus 249 p~~i~~d~-~G~lwi~~ 264 (343)
. ....+ +|++++..
T Consensus 286 -~-~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 286 -S-HLMSNFDGSLMVGD 300 (396)
T ss_dssp -E-EEEECSSSSEEEEE
T ss_pred -C-CCccCCCCceEEEe
Confidence 1 66777 89866654
No 236
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.40 E-value=0.00015 Score=65.65 Aligned_cols=192 Identities=12% Similarity=0.079 Sum_probs=113.3
Q ss_pred CceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 37 PESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 37 p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
..++.+.++ +..++++..++.|..||..+++........ . .......+..+.+.+.++.++++..
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~-~-------------~~~h~~~v~~~~~~~~~~~~l~sgs 225 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE-F-------------PSGHTADVLSLSINSLNANMFISGS 225 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC-S-------------SSSCCSCEEEEEECSSSCCEEEEEE
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc-c-------------CCCCccCeEEEEeecCCCCEEEEEE
Confidence 445666665 445778889999999999876544322100 0 0011223567777664555555434
Q ss_pred CCe-EEEEeCCCC-e-EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 116 YFG-LMVVGPNGG-Q-AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 116 ~~g-i~~~d~~~~-~-~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
.++ |..+|.+.. + +..+ ... ...++.+++.| ++..+++... .+.|..||..+++
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~-~~h----~~~v~~v~~~p-~~~~l~s~s~-----------------D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTY-HGH----EGDINSVKFFP-DGQRFGTGSD-----------------DGTCRLFDMRTGH 282 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEE-CCC----SSCCCEEEECT-TSSEEEEECS-----------------SSCEEEEETTTTE
T ss_pred CCCeEEEEECCCCCcceEEE-CCc----CCCeEEEEEec-CCCeEEEEcC-----------------CCeEEEEECCCCc
Confidence 444 888998632 2 2222 111 23578999999 5887776544 5668888887766
Q ss_pred eEEeecC--------CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEE
Q 019290 193 VTVMYNG--------LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIA 263 (343)
Q Consensus 193 ~~~~~~~--------~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~ 263 (343)
....... ......++++++++.++. ...++.|..|+............... ..+....++++++|++.++
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFA-GYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE-ECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEE-EECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE
Confidence 4432211 122578999999986654 45688999999764221011111101 1223556788999987776
Q ss_pred ecc
Q 019290 264 MNS 266 (343)
Q Consensus 264 ~~~ 266 (343)
...
T Consensus 362 gs~ 364 (380)
T 3iz6_a 362 GSW 364 (380)
T ss_dssp ECT
T ss_pred eeC
Confidence 654
No 237
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.39 E-value=0.00046 Score=63.85 Aligned_cols=226 Identities=12% Similarity=0.051 Sum_probs=125.0
Q ss_pred EcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeEEE
Q 019290 42 FDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMV 121 (343)
Q Consensus 42 ~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~ 121 (343)
+..+++.++++..++.|..||..+++..... ......+..+++.+ ++.+..+.....|..
T Consensus 128 ~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~-------------------~~h~~~V~~l~~~~-~~~l~s~s~dg~i~v 187 (464)
T 3v7d_B 128 LQFEDNYVITGADDKMIRVYDSINKKFLLQL-------------------SGHDGGVWALKYAH-GGILVSGSTDRTVRV 187 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEE-------------------CCCSSCEEEEEECS-TTEEEEEETTSCEEE
T ss_pred EEECCCEEEEEcCCCcEEEEECCCCcEEEEE-------------------eCCCcCEEEEEEcC-CCEEEEEeCCCCEEE
Confidence 3445677888899999999998776533221 12233567888887 666666654445999
Q ss_pred EeCCCCeEEEcccccCCCCccCcceeEEe--CCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEe---
Q 019290 122 VGPNGGQAQQLASSAGGIPFRFTNDLDID--PNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVM--- 196 (343)
Q Consensus 122 ~d~~~~~~~~~~~~~~~~~~~~~~~i~~d--~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~--- 196 (343)
+|.++++........ ...+..+++. + ++.+.++... .+.|..+|..++.....
T Consensus 188 wd~~~~~~~~~~~~h----~~~v~~l~~~~~~-~~~~l~s~s~-----------------d~~i~vwd~~~~~~~~~~~~ 245 (464)
T 3v7d_B 188 WDIKKGCCTHVFEGH----NSTVRCLDIVEYK-NIKYIVTGSR-----------------DNTLHVWKLPKESSVPDHGE 245 (464)
T ss_dssp EETTTTEEEEEECCC----SSCEEEEEEEESS-SCEEEEEEET-----------------TSCEEEEECCCCCCC-----
T ss_pred EECCCCcEEEEECCC----CCccEEEEEecCC-CCCEEEEEcC-----------------CCcEEEeeCCCCcccccccc
Confidence 999988654432221 1345666666 4 3565554332 34566666654431100
Q ss_pred -------------------ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCC
Q 019290 197 -------------------YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSK 257 (343)
Q Consensus 197 -------------------~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 257 (343)
..........++++++..++.+ ..++.|..|++..... ...+.........++++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~d~~i~vwd~~~~~~---~~~~~~~~~~v~~~~~~~~ 321 (464)
T 3v7d_B 246 EHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSG-SYDNTLIVWDVAQMKC---LYILSGHTDRIYSTIYDHE 321 (464)
T ss_dssp -CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEE-ETTSCEEEEETTTTEE---EEEECCCSSCEEEEEEETT
T ss_pred cCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEE-eCCCeEEEEECCCCcE---EEEecCCCCCEEEEEEcCC
Confidence 0001112233456777766555 4678999999864211 1222111222345678889
Q ss_pred CCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCC
Q 019290 258 GEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQP 336 (343)
Q Consensus 258 G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~ 336 (343)
|+..++... .+.|..+|. +++.+..+.... ..+..+..+++.|.. .....
T Consensus 322 ~~~l~sg~~------------------------dg~i~vwd~~~~~~~~~~~~h~----~~v~~~~~~~~~l~s-~s~dg 372 (464)
T 3v7d_B 322 RKRCISASM------------------------DTTIRIWDLENGELMYTLQGHT----ALVGLLRLSDKFLVS-AAADG 372 (464)
T ss_dssp TTEEEEEET------------------------TSCEEEEETTTTEEEEEECCCS----SCEEEEEECSSEEEE-EETTS
T ss_pred CCEEEEEeC------------------------CCcEEEEECCCCcEEEEEeCCC----CcEEEEEEcCCEEEE-EeCCC
Confidence 877766655 346777776 466666554322 234444444443433 33444
Q ss_pred eEEEEc
Q 019290 337 YVVVIK 342 (343)
Q Consensus 337 ~i~~~~ 342 (343)
.|.+++
T Consensus 373 ~v~vwd 378 (464)
T 3v7d_B 373 SIRGWD 378 (464)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 555554
No 238
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.38 E-value=8.9e-06 Score=73.23 Aligned_cols=195 Identities=9% Similarity=0.017 Sum_probs=105.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCC-eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSG-WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
...++++.++|+.+.++..++.|..||..+++ +..... .......+..+++++++..|..+.
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-----------------~~~~~~~v~~~~~~~~~~~l~~~~ 119 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV-----------------LLRLNRAATFVRWSPNEDKFAVGS 119 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEE-----------------CCCCSSCEEEEECCTTSSCCEEEE
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeE-----------------ecccCCceEEEEECCCCCEEEEEe
Confidence 46789999999988888889999999987654 111110 012223467888988445566665
Q ss_pred CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCC---
Q 019290 115 AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKK--- 191 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--- 191 (343)
....|..+|.++++...............+..+++.+ ++.+.++... .+.|..||...+
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~iwd~~~~~~~ 181 (377)
T 3dwl_C 120 GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-NNVLLAAGCA-----------------DRKAYVLSAYVRDVD 181 (377)
T ss_dssp SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-TSSEEEEEES-----------------SSCEEEEEECCSSCC
T ss_pred cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-CCCEEEEEeC-----------------CCEEEEEEEEecccC
Confidence 4344888898876521011111111124578899999 5776654432 345666664321
Q ss_pred ---------------ceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCcccccc-ceeeecCCCCCCceeeC
Q 019290 192 ---------------NVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYT-PQLFAEMPRFPDNIKSD 255 (343)
Q Consensus 192 ---------------~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~p~~i~~d 255 (343)
+.............++++++++.++.+ ..++.|..|++........ ...+.........+++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 260 (377)
T 3dwl_C 182 AKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA-GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWA 260 (377)
T ss_dssp -CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE-ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEE
T ss_pred CCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE-eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEc
Confidence 111111233446789999999866555 4678999999875321000 11221112223457788
Q ss_pred CCCCEEEEecc
Q 019290 256 SKGEFWIAMNS 266 (343)
Q Consensus 256 ~~G~lwi~~~~ 266 (343)
++|++.++...
T Consensus 261 ~~~~~l~~~~~ 271 (377)
T 3dwl_C 261 NESAIVAAGYN 271 (377)
T ss_dssp ETTEEEEEESS
T ss_pred CCCCEEEEEcC
Confidence 88887776654
No 239
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.38 E-value=0.00042 Score=61.37 Aligned_cols=160 Identities=8% Similarity=0.032 Sum_probs=100.4
Q ss_pred CCceEEEcCC----CCeeEEEecCCEEEEEEcCCCC-eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCC---
Q 019290 36 GPESLAFDCN----GEGPYVGVSDGRILKWKAANSG-WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVT--- 107 (343)
Q Consensus 36 ~p~~l~~d~~----g~~l~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~--- 107 (343)
...++++.|+ ...++++..++.|..||..+++ ...+.... ..........+++.++.
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~---------------~~~~~~~v~~~~~~~~~~~~ 84 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYV---------------DADADENFYTCAWTYDSNTS 84 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEE---------------CSCTTCCEEEEEEEECTTTC
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecc---------------ccCCCCcEEEEEeccCCCCC
Confidence 5678999973 3446677777899999987543 23332110 00122346788888731
Q ss_pred Ce-EEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEE
Q 019290 108 CD-LYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKY 186 (343)
Q Consensus 108 ~~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (343)
+. |+.+.....|..+|.++++........ ...+..+++.+.++.+.++... .+.|..|
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~s~~~-----------------dg~i~iw 143 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGH----GNAINELKFHPRDPNLLLSVSK-----------------DHALRLW 143 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESC----CSCEEEEEECSSCTTEEEEEET-----------------TSCEEEE
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCC----CCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEE
Confidence 33 555543334899999877654332211 2457889998832565554322 4678889
Q ss_pred eCCCCceEEee----cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 187 DPLKKNVTVMY----NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 187 d~~~~~~~~~~----~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
|..+++..... ........++++++++.++.+ ..++.|..|++..
T Consensus 144 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~ 192 (366)
T 3k26_A 144 NIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSC-GMDHSLKLWRINS 192 (366)
T ss_dssp ETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESCS
T ss_pred EeecCeEEEEecccccccCceeEEEECCCCCEEEEe-cCCCCEEEEECCC
Confidence 98777655433 234557889999999876655 4578999999875
No 240
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.38 E-value=4.6e-05 Score=68.12 Aligned_cols=194 Identities=14% Similarity=0.120 Sum_probs=110.5
Q ss_pred CCceEEEcCC--CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC--CCeEE
Q 019290 36 GPESLAFDCN--GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV--TCDLY 111 (343)
Q Consensus 36 ~p~~l~~d~~--g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~~~l~ 111 (343)
...++++.++ ++.++++..++.|..||..++++...... ......+..++++++ +..++
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----------------~~~~~~v~~~~~~~~~~~~~l~ 119 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH-----------------AVHSASVNSVQWAPHEYGPLLL 119 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEE-----------------CCCSSCEEEEEECCGGGCSEEE
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeee-----------------cCCCcceEEEEeCCCCCCCEEE
Confidence 4568888876 88888888999999999887653333211 112234678999984 34566
Q ss_pred EEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCC------------CCeEEEEeCCcccccccceeeeeecCC
Q 019290 112 IADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPN------------TGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 112 v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~------------dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
++.....|..+|.+++......... . ....+..+++.+. ++.++++...
T Consensus 120 ~~~~d~~i~v~d~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------- 180 (379)
T 3jrp_A 120 VASSDGKVSVVEFKENGTTSPIIID-A-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA----------------- 180 (379)
T ss_dssp EEETTSEEEEEECCTTSCCCEEEEE-C-CTTCEEEEEECCCC----------CTTCEEEEEET-----------------
T ss_pred EecCCCcEEEEecCCCCceeeEEec-C-CCCceEEEEEcCccccccccccCCCCCCEEEEEeC-----------------
Confidence 6654445889998766321110110 0 1134677888772 2554443322
Q ss_pred CceEEEEeCCCCce-----EEeecCCCCcceeEEecC---CCEEEEEEcCCCeEEEEEccCccccccceeeec--CCCCC
Q 019290 180 SGRLLKYDPLKKNV-----TVMYNGLSFPNGVALSNN---NSFLLLAESATLKILRFWLQGERTTYTPQLFAE--MPRFP 249 (343)
Q Consensus 180 ~~~v~~~d~~~~~~-----~~~~~~~~~~~~i~~~~d---~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~p 249 (343)
.+.|..||..++.. ..+.........++++|+ +. ++++...++.|..|++...........+.. .....
T Consensus 181 dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v 259 (379)
T 3jrp_A 181 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL 259 (379)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE
T ss_pred CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcE
Confidence 44577776543331 122223345678999999 55 455556688999999875321001111111 11223
Q ss_pred CceeeCCCCCEEEEecc
Q 019290 250 DNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 250 ~~i~~d~~G~lwi~~~~ 266 (343)
..++++++|+++++...
T Consensus 260 ~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 260 WRASWSLSGNVLALSGG 276 (379)
T ss_dssp EEEEECSSSCCEEEEES
T ss_pred EEEEEcCCCCEEEEecC
Confidence 34677888876555433
No 241
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.38 E-value=0.0004 Score=63.68 Aligned_cols=176 Identities=10% Similarity=0.064 Sum_probs=98.0
Q ss_pred CCceEEEcCCC--CeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCC-CC----C---------------cc-cC
Q 019290 36 GPESLAFDCNG--EGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDG-ST----N---------------TT-LE 92 (343)
Q Consensus 36 ~p~~l~~d~~g--~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~----~---------------~~-~~ 92 (343)
...++++.+++ ..+.++..++.|..|+..++....-.............. .. . .. ..
T Consensus 95 ~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 95 KINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred ceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 47789999998 667788889999998875532211000000000000000 00 0 00 01
Q ss_pred CCcCCeeeEEEeCCCCeEEEEeCCCeEEEEeCCC-CeEEEcccc---cCCCCccCcceeEEeCCCC-eEEEEeCCccccc
Q 019290 93 PLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNG-GQAQQLASS---AGGIPFRFTNDLDIDPNTG-IVYFTDSSIYFQR 167 (343)
Q Consensus 93 ~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~d~~~-~~~~~~~~~---~~~~~~~~~~~i~~d~~dg-~l~v~~~~~~~~~ 167 (343)
.....+..+++++ ++.++++.....|..+|.++ ++....... ........+..+++++ ++ .++++...
T Consensus 175 ~h~~~v~~~~~~~-~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~----- 247 (447)
T 3dw8_B 175 AHTYHINSISINS-DYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSS----- 247 (447)
T ss_dssp CCSSCCCEEEECT-TSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEET-----
T ss_pred CCCcceEEEEEcC-CCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeC-----
Confidence 2233467899998 56555554434488999883 222221100 0011124578899999 46 66554432
Q ss_pred ccceeeeeecCCCceEEEEeCCCCce-----EEeecCCC------------CcceeEEecCCCEEEEEEcCCCeEEEEEc
Q 019290 168 RQYFMSIATGDRSGRLLKYDPLKKNV-----TVMYNGLS------------FPNGVALSNNNSFLLLAESATLKILRFWL 230 (343)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~d~~~~~~-----~~~~~~~~------------~~~~i~~~~d~~~lyv~~~~~~~i~~~~~ 230 (343)
.+.|..||..+++. ..+..... ....++++++++.+.... . +.|..|++
T Consensus 248 ------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~-~~v~iwd~ 313 (447)
T 3dw8_B 248 ------------KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-Y-LSVKVWDL 313 (447)
T ss_dssp ------------TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-S-SEEEEEET
T ss_pred ------------CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-C-CeEEEEeC
Confidence 45688888776653 33332222 567899999998766554 4 89999998
Q ss_pred cC
Q 019290 231 QG 232 (343)
Q Consensus 231 ~~ 232 (343)
..
T Consensus 314 ~~ 315 (447)
T 3dw8_B 314 NM 315 (447)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 242
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.38 E-value=2.7e-05 Score=70.31 Aligned_cols=202 Identities=10% Similarity=0.002 Sum_probs=103.5
Q ss_pred CceEEEcCCCCeeEEE-ec--CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCe-eeEEEeCCCCeEEE
Q 019290 37 PESLAFDCNGEGPYVG-VS--DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRP-LGIKFNPVTCDLYI 112 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~-~~--~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~gi~~~~~~~~l~v 112 (343)
+.+++++++|+.+.+. .. ...|+.+|..+++...+.. ..... ..+.++++++.|++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~--------------------~~~~~~~~~~~spdg~~l~~ 97 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE--------------------GKGDNTFGGFISTDERAFFY 97 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC--------------------SSCBCTTTCEECTTSSEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec--------------------CCCCccccceECCCCCEEEE
Confidence 6778899999965543 32 2479999988876554421 01111 22567775556766
Q ss_pred EeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCC--eEEEEeCCcccccccceeeee---ecCCCceEEEEe
Q 019290 113 ADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTG--IVYFTDSSIYFQRRQYFMSIA---TGDRSGRLLKYD 187 (343)
Q Consensus 113 ~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg--~l~v~~~~~~~~~~~~~~~~~---~~~~~~~v~~~d 187 (343)
+.....|+.+|.++++.+.+........ ..-..+++...+. .+|... ..+.......... .......|+.+|
T Consensus 98 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~-~~g~~l~~~~~~~~~~~~~~~--~~~spdg~~~~~~~~~~~~~~~~l~~~d 174 (396)
T 3c5m_A 98 VKNELNLMKVDLETLEEQVIYTVDEEWK-GYGTWVANSDCTKLVGIEILK--RDWQPLTSWEKFAEFYHTNPTCRLIKVD 174 (396)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCTTEE-EEEEEEECTTSSEEEEEEEEG--GGCCCCCSHHHHHHHHHTCCCEEEEEEE
T ss_pred EEcCCcEEEEECCCCCcEEEEecccccC-CCCCEEEeccCCccccccccc--cccCCCCcceeeeeeccCCCcceEEEEE
Confidence 6555569999999887665543211100 0000011111000 000000 0000000000000 002245799999
Q ss_pred CCCCceEEeecCCCCcceeEEec-CCCEEEEEEcCC-----CeEEEEEccCccccccceeeecC--CCCCCceeeCCCCC
Q 019290 188 PLKKNVTVMYNGLSFPNGVALSN-NNSFLLLAESAT-----LKILRFWLQGERTTYTPQLFAEM--PRFPDNIKSDSKGE 259 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~i~~~~-d~~~lyv~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~--~~~p~~i~~d~~G~ 259 (343)
..+++...+.........+++++ +++.++++.... ..|+.+++++ ...+.+... ...+..+.++++|+
T Consensus 175 ~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~----~~~~~l~~~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 175 IETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG----SNVRKIKEHAEGESCTHEFWIPDGS 250 (396)
T ss_dssp TTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS----CCCEESSCCCTTEEEEEEEECTTSS
T ss_pred CCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC----CceeEeeccCCCccccceEECCCCC
Confidence 98888766654444566788998 777665554322 4799999865 222222221 11123357889986
Q ss_pred -EEEEec
Q 019290 260 -FWIAMN 265 (343)
Q Consensus 260 -lwi~~~ 265 (343)
|+++..
T Consensus 251 ~l~~~~~ 257 (396)
T 3c5m_A 251 AMAYVSY 257 (396)
T ss_dssp CEEEEEE
T ss_pred EEEEEec
Confidence 555544
No 243
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.37 E-value=0.00011 Score=67.14 Aligned_cols=221 Identities=9% Similarity=-0.029 Sum_probs=122.7
Q ss_pred EcCCCCeeEEEecCCEEEEEEcCC--CCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC-CCCeEEEEeCCC-
Q 019290 42 FDCNGEGPYVGVSDGRILKWKAAN--SGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP-VTCDLYIADAYF- 117 (343)
Q Consensus 42 ~d~~g~~l~~~~~~g~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~-~~~~l~v~~~~~- 117 (343)
.|+++. +|+++..| +++++... ..|..+... ........|++++ +.+.||++....
T Consensus 19 ~d~~g~-l~vgt~~G-l~~~~~~~~g~~W~~~~~~------------------~~~~~v~~i~~dp~~~~~l~~g~~~g~ 78 (394)
T 3b7f_A 19 ESGPVM-LLVATIKG-AWFLASDPARRTWELRGPV------------------FLGHTIHHIVQDPREPERMLMAARTGH 78 (394)
T ss_dssp CCSCCE-EEEEETTE-EEEEEECTTSCSEEEEEEE------------------STTSEEEEEEECSSSTTCEEEEEEC--
T ss_pred CCCCCE-EEEEecCc-eEEEECCCCCCCceECCcc------------------CCCCceEEEEECCCCCCeEEEEecCCC
Confidence 455566 89988765 88887654 567665210 1112457888886 357899986443
Q ss_pred ---eEEEEeCCCCeEEEccccc--CCC-------CccCcceeEEeCC--CCeEEEEeCCcccccccceeeeeecCCCceE
Q 019290 118 ---GLMVVGPNGGQAQQLASSA--GGI-------PFRFTNDLDIDPN--TGIVYFTDSSIYFQRRQYFMSIATGDRSGRL 183 (343)
Q Consensus 118 ---gi~~~d~~~~~~~~~~~~~--~~~-------~~~~~~~i~~d~~--dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v 183 (343)
+|++.+-.+..++.+.... ... ....+..+++++. .+.+|++.. .++|
T Consensus 79 ~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------------------~ggl 140 (394)
T 3b7f_A 79 LGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------------------PQGL 140 (394)
T ss_dssp CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------------------TTEE
T ss_pred CCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------------------CCcE
Confidence 6888765555566653211 110 1123556888852 378999553 3568
Q ss_pred EEEeCCCCceEEeecC-------------------CCCcceeEEec-CCCEEEEEEcCCCeEEEEEccCccccccceeee
Q 019290 184 LKYDPLKKNVTVMYNG-------------------LSFPNGVALSN-NNSFLLLAESATLKILRFWLQGERTTYTPQLFA 243 (343)
Q Consensus 184 ~~~d~~~~~~~~~~~~-------------------~~~~~~i~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (343)
++.+..+...+.+... ......+++++ +.+.+|+... .+.|++.+-.+ ...+.+.
T Consensus 141 ~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~DgG----~tW~~~~ 215 (394)
T 3b7f_A 141 FRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFESTDAG----TDWKPLN 215 (394)
T ss_dssp EEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEESSTT----SSCEECC
T ss_pred EEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEECCCC----CCceECC
Confidence 8887554555543210 01124677776 3456887753 45688765434 2222221
Q ss_pred c-CC--CC----------CCceeeCCC--CCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEee
Q 019290 244 E-MP--RF----------PDNIKSDSK--GEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD 308 (343)
Q Consensus 244 ~-~~--~~----------p~~i~~d~~--G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~ 308 (343)
. .. .+ ...++++++ +.+|+++.. +|++.+..|+....+.
T Consensus 216 ~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~--------------------------gl~~s~D~G~tW~~~~ 269 (394)
T 3b7f_A 216 RGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC--------------------------GIYRMDRREGVWKRIG 269 (394)
T ss_dssp TTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT--------------------------EEEEEETTTTEEECGG
T ss_pred CCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC--------------------------eEEEeCCCCCcceECC
Confidence 1 00 01 234677875 789998765 7888876777665543
Q ss_pred C--CCCCccCCceeEEE---eCCEEEEec
Q 019290 309 G--NEGNTLNSVSEVQE---YGEYLYTGS 332 (343)
Q Consensus 309 ~--~~~~~~~~~~~~~~---~~g~l~i~~ 332 (343)
. +.. .......+.. +.+.||+++
T Consensus 270 ~~l~~~-~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 270 DAMPRE-VGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp GGSCTT-TCSCEEEEEECSSCTTCEEEEE
T ss_pred CCCCCC-CccceEEEEECCCCCCEEEEEe
Confidence 2 211 0011222333 357889875
No 244
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.36 E-value=0.00029 Score=69.78 Aligned_cols=250 Identities=9% Similarity=0.020 Sum_probs=131.2
Q ss_pred ceEEEcCCCCeeEEEecC---------CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCC
Q 019290 38 ESLAFDCNGEGPYVGVSD---------GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTC 108 (343)
Q Consensus 38 ~~l~~d~~g~~l~~~~~~---------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~ 108 (343)
.++.++|||+.+.+...+ +.++.+|..+++...+. .........+++|++.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~--------------------~~~~~~~~~~~SPdG~ 124 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEE--------------------RIPNNTQWVTWSPVGH 124 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS--------------------CCCTTEEEEEECSSTT
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcc--------------------cCCCcceeeEECCCCC
Confidence 448899999976665543 56788998887544321 1122356778898555
Q ss_pred eEEEEeCCCeEEEEeCCCCeEEEcccccCCC-C-------------ccCcceeEEeCCCCe-EEEEe--CCc--cccc--
Q 019290 109 DLYIADAYFGLMVVGPNGGQAQQLASSAGGI-P-------------FRFTNDLDIDPNTGI-VYFTD--SSI--YFQR-- 167 (343)
Q Consensus 109 ~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~-~-------------~~~~~~i~~d~~dg~-l~v~~--~~~--~~~~-- 167 (343)
.|.++ ....|+.++.++++.+.+....... . +.....+++.| ||+ |.++. ... .+.+
T Consensus 125 ~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~ 202 (740)
T 4a5s_A 125 KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSF 202 (740)
T ss_dssp CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEE
T ss_pred EEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEe
Confidence 67666 3567999999888766653221110 0 11223578888 576 44431 110 0000
Q ss_pred -----------ccceeeee-ecCCCceEEEEeCCC---C---ceEEeec------CCCCcceeEEecCCCEEEEE-EcC-
Q 019290 168 -----------RQYFMSIA-TGDRSGRLLKYDPLK---K---NVTVMYN------GLSFPNGVALSNNNSFLLLA-ESA- 221 (343)
Q Consensus 168 -----------~~~~~~~~-~~~~~~~v~~~d~~~---~---~~~~~~~------~~~~~~~i~~~~d~~~lyv~-~~~- 221 (343)
....+... ...+...|+.+|.++ + +...+.. .......++++|||+.++.. ...
T Consensus 203 ~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~ 282 (740)
T 4a5s_A 203 YSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ 282 (740)
T ss_dssp CCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST
T ss_pred ecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC
Confidence 00000000 001123688899887 6 4444432 12224567899999854433 322
Q ss_pred -CCeEEEEEccCcc----ccccceeeec-CCCC-----CCceeeCCCCCEE--EEeccCCCccccccccccccccCCCcc
Q 019290 222 -TLKILRFWLQGER----TTYTPQLFAE-MPRF-----PDNIKSDSKGEFW--IAMNSARGKIESNKKTAFCEETAKPWF 288 (343)
Q Consensus 222 -~~~i~~~~~~~~~----~~~~~~~~~~-~~~~-----p~~i~~d~~G~lw--i~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (343)
...|+.+++.+.. .....+.+.+ ..+. +...++.+||+.+ ......+
T Consensus 283 ~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G-------------------- 342 (740)
T 4a5s_A 283 NYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG-------------------- 342 (740)
T ss_dssp TEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS--------------------
T ss_pred CEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC--------------------
Confidence 2368888887532 0001111111 1111 3356788999732 2332212
Q ss_pred cCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCC
Q 019290 289 LRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSV 334 (343)
Q Consensus 289 ~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~ 334 (343)
...|+.+|.+++....+.... .........+++.||+.+..
T Consensus 343 --~~~l~~~~~~~~~~~~lT~g~---~~v~~~~~~d~~~i~f~~~~ 383 (740)
T 4a5s_A 343 --YRHICYFQIDKKDCTFITKGT---WEVIGIEALTSDYLYYISNE 383 (740)
T ss_dssp --CEEEEEEETTCSSCEESCCSS---SCEEEEEEECSSEEEEEESC
T ss_pred --ceEEEEEECCCCceEecccCC---EEEEEEEEEeCCEEEEEEec
Confidence 237888888776655544221 11122222457788877665
No 245
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.34 E-value=0.00062 Score=59.74 Aligned_cols=191 Identities=8% Similarity=-0.002 Sum_probs=106.9
Q ss_pred CCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE
Q 019290 36 GPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~ 113 (343)
...+|++.|+ ++++.++..++.|..||..+.+.. .... .........+..+++++++..|..+
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~---------------~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQ---------------RALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEE---------------EEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceee---------------EEEeCCCCCEEEEEECCCCCEEEEE
Confidence 4679999997 677778889999999987654311 0000 0001122346789999844445555
Q ss_pred eCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV 193 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 193 (343)
.....+..++.............. .........+. +...++... .+.+..+|......
T Consensus 105 ~~d~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~l~s~s~-----------------d~~~~~~d~~~~~~ 162 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTTRRFVGHT----KDVLSVAFSSD-NRQIVSGSR-----------------DKTIKLWNTLGVCK 162 (340)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCS----SCEEEEEECTT-SSCEEEEET-----------------TSCEEEECTTSCEE
T ss_pred cccccceEEeecccceeeeecCCC----CceeEEEEeec-CccceeecC-----------------CCeEEEEEeCCCce
Confidence 433447888887665443322211 23445566663 555443322 34577777654433
Q ss_pred EEee--cCCCCcceeEEecCCC-EEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 194 TVMY--NGLSFPNGVALSNNNS-FLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 194 ~~~~--~~~~~~~~i~~~~d~~-~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.... ........+++.+++. .++++...++.|..|++..... ...+....+....++++++|++.++...
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~---~~~~~~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL---KTNHIGHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce---eeEecCCCCcEEEEEECCCCCEEEEEeC
Confidence 2221 1123345667776543 3555666778899999765221 1122111222345778999987776554
No 246
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.33 E-value=3.8e-05 Score=69.37 Aligned_cols=159 Identities=14% Similarity=0.047 Sum_probs=97.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEE-Ee
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYI-AD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v-~~ 114 (343)
...++++.|+|+.+.++. ++.+.+++..++........ .........+++.+ ++..++ +.
T Consensus 178 ~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~v~~v~fsp-dg~~l~~~s 238 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTD-----------------FDKNWSLSKINFIA-DDTVLIAAS 238 (365)
T ss_dssp CCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECC-----------------CCTTEEEEEEEEEE-TTEEEEEEE
T ss_pred ceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeec-----------------CCCCCCEEEEEEcC-CCCEEEEEe
Confidence 478999999999555554 56688888766543321100 01122356788998 555444 42
Q ss_pred CCC----eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC
Q 019290 115 AYF----GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK 190 (343)
Q Consensus 115 ~~~----gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 190 (343)
... -+..++....................+..+++.| ||++.++... .+.|..||..+
T Consensus 239 ~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~-----------------D~~V~iwd~~~ 300 (365)
T 4h5i_A 239 LKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVLASN-----------------DNSIALVKLKD 300 (365)
T ss_dssp ESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEEEET-----------------TSCEEEEETTT
T ss_pred cCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEEEcC-----------------CCEEEEEECCC
Confidence 222 2556666555433221110011123578899999 5887765433 45688899887
Q ss_pred CceEE-eec-CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 191 KNVTV-MYN-GLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 191 ~~~~~-~~~-~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
++... +.. .......++|+||++.| ++.+.++.|.+|++..
T Consensus 301 ~~~~~~~~~gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 301 LSMSKIFKQAHSFAITEVTISPDSTYV-ASVSAANTIHIIKLPL 343 (365)
T ss_dssp TEEEEEETTSSSSCEEEEEECTTSCEE-EEEETTSEEEEEECCT
T ss_pred CcEEEEecCcccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcCC
Confidence 77543 332 34557899999999854 5667789999999864
No 247
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.32 E-value=0.0012 Score=60.36 Aligned_cols=234 Identities=12% Similarity=0.005 Sum_probs=128.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+|++.++|+.+.++..++.|..||..+++...... ........+..+ ...|..+..
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~-------------------~h~~~v~~~s~~--~~~l~sgs~ 207 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT-------------------SHSARVGSLSWN--SYILSSGSR 207 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-------------------CCSSCEEEEEEE--TTEEEEEET
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe-------------------CCCCceEEEeeC--CCEEEEEeC
Confidence 36799999999988899999999999998765432211 111233445554 345555544
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce--
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV-- 193 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-- 193 (343)
...+..+|............ + ....+..+...+ ++...++... .+.+..++..+++.
T Consensus 208 d~~i~~~d~~~~~~~~~~~~--~-h~~~~~~~~~~~-~g~~l~s~~~-----------------D~~v~i~~~~~~~~~~ 266 (420)
T 4gga_A 208 SGHIHHHDVRVAEHHVATLS--G-HSQEVCGLRWAP-DGRHLASGGN-----------------DNLVNVWPSAPGEGGW 266 (420)
T ss_dssp TSEEEEEETTSSSCEEEEEE--C-CSSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEESSCCSSCS
T ss_pred CCceeEeeecccceeeEEec--c-cccceeeeeecC-CCCeeeeeec-----------------cccceEEeeccccccc
Confidence 44477787765432211001 1 113456777888 4776654432 34566677654432
Q ss_pred ---EEeecCCCCcceeEEecCCCEEEEE--EcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCC
Q 019290 194 ---TVMYNGLSFPNGVALSNNNSFLLLA--ESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSAR 268 (343)
Q Consensus 194 ---~~~~~~~~~~~~i~~~~d~~~lyv~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~ 268 (343)
............+++.+++..++++ .+.++.|..|++..... ...+ ........++..++++..++.....
T Consensus 267 ~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~---~~~~-~~~~~v~~~~~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 267 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC---LSAV-DAHSQVCSILWSPHYKELISGHGFA 342 (420)
T ss_dssp CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE---EEEE-ECSSCEEEEEEETTTTEEEEEECTT
T ss_pred eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc---ceee-ccccceeeeeecCCCCeEEEEEecC
Confidence 1222233445778888877666554 34568999999865221 1111 1222234456677776555543211
Q ss_pred CccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEE
Q 019290 269 GKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVI 341 (343)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~ 341 (343)
.+.|..+|. +++.+..+.... ..+..+... +|++.++...-..|.+.
T Consensus 343 ----------------------d~~I~iwd~~~~~~v~~l~gH~----~~V~~l~~spdg~~l~S~s~D~tvriW 391 (420)
T 4gga_A 343 ----------------------QNQLVIWKYPTMAKVAELKGHT----SRVLSLTMSPDGATVASAAADETLRLW 391 (420)
T ss_dssp ----------------------TCCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred ----------------------CCEEEEEECCCCcEEEEEcCCC----CCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 235666674 566666664322 345554443 45555544444444443
No 248
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.26 E-value=0.00016 Score=64.54 Aligned_cols=149 Identities=11% Similarity=0.048 Sum_probs=83.5
Q ss_pred CeeeEEEeCCCCeEEEEeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeee
Q 019290 97 RPLGIKFNPVTCDLYIADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIA 175 (343)
Q Consensus 97 ~p~gi~~~~~~~~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~ 175 (343)
....+++++++..|..+ ..++ |..+|.++++.........+ ....+..+++.+ +|++.++...
T Consensus 18 ~v~~l~~sp~g~~las~-~~D~~i~iw~~~~~~~~~~~~~~~~-h~~~v~~~~~sp-~g~~l~s~s~------------- 81 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASC-GGDRRIRIWGTEGDSWICKSVLSEG-HQRTVRKVAWSP-CGNYLASASF------------- 81 (345)
T ss_dssp CEEEEEECTTSSCEEEE-ETTSCEEEEEEETTEEEEEEEECSS-CSSCEEEEEECT-TSSEEEEEET-------------
T ss_pred cEEEEEECCCCCEEEEE-cCCCeEEEEEcCCCcceeeeeeccc-cCCcEEEEEECC-CCCEEEEEEC-------------
Confidence 45789999943344445 3444 88888877654322111111 124578899999 5876665432
Q ss_pred ecCCCceEEEEeCCCCceE---EeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCce
Q 019290 176 TGDRSGRLLKYDPLKKNVT---VMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNI 252 (343)
Q Consensus 176 ~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i 252 (343)
.+.+..++...+... .+.........++++|+++.|. +...++.|..|++...........+.........+
T Consensus 82 ----D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 82 ----DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLA-TCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp ----TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred ----CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEE-EEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence 344555555444332 2333345578899999998655 44567899999987532201111111111123346
Q ss_pred eeCCCCCEEEEecc
Q 019290 253 KSDSKGEFWIAMNS 266 (343)
Q Consensus 253 ~~d~~G~lwi~~~~ 266 (343)
+..++|++.++...
T Consensus 157 ~~~p~~~~l~s~s~ 170 (345)
T 3fm0_A 157 VWHPSQELLASASY 170 (345)
T ss_dssp EECSSSSCEEEEET
T ss_pred EECCCCCEEEEEeC
Confidence 67888876655444
No 249
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.25 E-value=0.00032 Score=62.13 Aligned_cols=151 Identities=7% Similarity=-0.027 Sum_probs=90.4
Q ss_pred CCceEEEcCCCCeeEEEe-c----CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 36 GPESLAFDCNGEGPYVGV-S----DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~-~----~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
....++++|||+.+.+.. . ...|+.++..+++...+... .. ...+.+++++..|
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~--------------------~~-~~~~~wspdg~~l 118 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA--------------------KN-IRSLEWNEDSRKL 118 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE--------------------SE-EEEEEECTTSSEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC--------------------CC-ccceeECCCCCEE
Confidence 467789999998555433 2 23589999887765554321 11 4567788745567
Q ss_pred EEEeC---------------------------CCeEEEEeCCCCeE-EEcccccCCCCccCcceeEEeCCCCeEEEEeCC
Q 019290 111 YIADA---------------------------YFGLMVVGPNGGQA-QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSS 162 (343)
Q Consensus 111 ~v~~~---------------------------~~gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~ 162 (343)
+++.. ...|+.+|.++++. +.+.. . .+..+++.+ || ++++...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~------~~~~~~~sp-dg-~~~~~~~ 189 (347)
T 2gop_A 119 LIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P------RFSSGIWHR-DK-IVVNVPH 189 (347)
T ss_dssp EEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E------TTCEEEEET-TE-EEEEEEC
T ss_pred EEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C------CcccccCCC-Ce-EEEEEec
Confidence 76632 13489999998887 55432 1 356788999 58 5554321
Q ss_pred cccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcC-------CCeEEEEE
Q 019290 163 IYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESA-------TLKILRFW 229 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~-------~~~i~~~~ 229 (343)
.... ....+...|+.+| +++.+.+... . ....++|||+.+++.... ...|+.++
T Consensus 190 ~~~~--------~~~~~~~~l~~~d--~~~~~~l~~~-~--~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 190 REII--------PQYFKFWDIYIWE--DGKEEKMFEK-V--SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp CCSS--------CCSSCCEEEEEEE--TTEEEEEEEE-E--SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cccc--------ccccccccEEEeC--CCceEEeccC-c--ceeeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 0000 0000034689998 5666655443 2 122338999888776533 35788888
No 250
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.25 E-value=0.0022 Score=59.22 Aligned_cols=243 Identities=10% Similarity=-0.020 Sum_probs=132.2
Q ss_pred CCceEEEc--CCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCC-----CCcccCCCcCCeeeEEEeCCCC
Q 019290 36 GPESLAFD--CNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGS-----TNTTLEPLCGRPLGIKFNPVTC 108 (343)
Q Consensus 36 ~p~~l~~d--~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~gi~~~~~~~ 108 (343)
...++++. +++..++++..++.|..||..+.............. .....+ ..............+ .++++
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~ 281 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYP-LVFHTPEENPYFVGVLRGHMASVRTV--SGHGN 281 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSS-EEESCGGGCTTEEEEECCCSSCEEEE--EEETT
T ss_pred ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcc-eEeeccCCCeEEEEEccCccceEEEE--cCCCC
Confidence 34566666 577778888899999999987643211100000000 000000 000000111122333 33245
Q ss_pred eEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 109 DLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 109 ~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
.+.++.....|..+|..+++........ ...+..+++++ ++...++... .+.|..||.
T Consensus 282 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~-~~~~l~sg~~-----------------dg~i~vwd~ 339 (464)
T 3v7d_B 282 IVVSGSYDNTLIVWDVAQMKCLYILSGH----TDRIYSTIYDH-ERKRCISASM-----------------DTTIRIWDL 339 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCC----SSCEEEEEEET-TTTEEEEEET-----------------TSCEEEEET
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC----CCCEEEEEEcC-CCCEEEEEeC-----------------CCcEEEEEC
Confidence 6777754445999999887654332211 24578899999 4766554432 467888998
Q ss_pred CCCceEEee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccC
Q 019290 189 LKKNVTVMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSA 267 (343)
Q Consensus 189 ~~~~~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~ 267 (343)
.+++..... ........++++ +..+ ++...++.|..|++..... ............+++.++|++.++...
T Consensus 340 ~~~~~~~~~~~h~~~v~~~~~~--~~~l-~s~s~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~d- 411 (464)
T 3v7d_B 340 ENGELMYTLQGHTALVGLLRLS--DKFL-VSAAADGSIRGWDANDYSR----KFSYHHTNLSAITTFYVSDNILVSGSE- 411 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEC--SSEE-EEEETTSEEEEEETTTCCE----EEEEECTTCCCEEEEEECSSEEEEEET-
T ss_pred CCCcEEEEEeCCCCcEEEEEEc--CCEE-EEEeCCCcEEEEECCCCce----eeeecCCCCccEEEEEeCCCEEEEecC-
Confidence 777654333 333345566665 4544 4555688999999875221 111112222344677888887776554
Q ss_pred CCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeE
Q 019290 268 RGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYV 338 (343)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i 338 (343)
+.|..+|. +++.+.....+. ...+..+..+++.+.++......+
T Consensus 412 ------------------------g~i~iwd~~~g~~~~~~~~~~---~~~v~~v~~~~~~l~~~~~~~g~~ 456 (464)
T 3v7d_B 412 ------------------------NQFNIYNLRSGKLVHANILKD---ADQIWSVNFKGKTLVAAVEKDGQS 456 (464)
T ss_dssp ------------------------TEEEEEETTTCCEEESCTTTT---CSEEEEEEEETTEEEEEEEETTEE
T ss_pred ------------------------CeEEEEECCCCcEEehhhccC---CCcEEEEEecCCEEEEEEEeCCeE
Confidence 36777885 566665432221 244556666677777776655433
No 251
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.24 E-value=0.00043 Score=63.52 Aligned_cols=240 Identities=9% Similarity=0.058 Sum_probs=133.7
Q ss_pred CCceEEEcC-CCCeeEEEecCCEEEEEEcCC---CC----eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCC
Q 019290 36 GPESLAFDC-NGEGPYVGVSDGRILKWKAAN---SG----WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVT 107 (343)
Q Consensus 36 ~p~~l~~d~-~g~~l~~~~~~g~i~~~d~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~ 107 (343)
...++++.+ +|..+.++..++.|..||..+ +. ...+ .....+..+++.+++
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~---------------------~h~~~v~~~~~~~~~ 123 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY---------------------DCSSTVTQITMIPNF 123 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE---------------------ECSSCEEEEEECTTS
T ss_pred ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec---------------------cCCCCEEEEEEeCCC
Confidence 577999999 999888888999999998754 21 1111 112346789999844
Q ss_pred CeEEEEeCCCeEEEEeCC---CCeEEEcccc--------cCCCCccCcceeE--EeCCCCeEEEEeCCcccccccceeee
Q 019290 108 CDLYIADAYFGLMVVGPN---GGQAQQLASS--------AGGIPFRFTNDLD--IDPNTGIVYFTDSSIYFQRRQYFMSI 174 (343)
Q Consensus 108 ~~l~v~~~~~gi~~~d~~---~~~~~~~~~~--------~~~~~~~~~~~i~--~d~~dg~l~v~~~~~~~~~~~~~~~~ 174 (343)
..|..+.....|..+|.+ +++....... ........+..++ ..+ ++.+.++...
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~------------ 190 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTN------------ 190 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEET------------
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeC------------
Confidence 456666433447777763 3332221110 0000112233343 335 3555554332
Q ss_pred eecCCCceEEEEeCCCCceEEeec---CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee-cCCCCCC
Q 019290 175 ATGDRSGRLLKYDPLKKNVTVMYN---GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA-EMPRFPD 250 (343)
Q Consensus 175 ~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~p~ 250 (343)
.+.|..||..+++...... .......+++++++..++.+ ..++.|..|++..... ...+. .......
T Consensus 191 -----d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~ 261 (437)
T 3gre_A 191 -----LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILG-TTRGIIDIWDIRFNVL---IRSWSFGDHAPIT 261 (437)
T ss_dssp -----TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEE-ETTSCEEEEETTTTEE---EEEEBCTTCEEEE
T ss_pred -----CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEE-cCCCeEEEEEcCCccE---EEEEecCCCCceE
Confidence 5678899987766543332 23567889999998866554 5678999999865211 11111 1111122
Q ss_pred ce----eeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCC-CCEEEEeeCCCCC------------
Q 019290 251 NI----KSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVN-GNVVDVLDGNEGN------------ 313 (343)
Q Consensus 251 ~i----~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-g~~~~~~~~~~~~------------ 313 (343)
.+ .++++|.+.++... .+.|..+|.+ ++....+......
T Consensus 262 ~~~~~~~~s~~~~~l~s~~~------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (437)
T 3gre_A 262 HVEVCQFYGKNSVIVVGGSS------------------------KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKG 317 (437)
T ss_dssp EEEECTTTCTTEEEEEEEST------------------------TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSS
T ss_pred EEEeccccCCCccEEEEEcC------------------------CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccc
Confidence 34 23456766665544 3456677764 5555554422110
Q ss_pred ----------ccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 314 ----------TLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 314 ----------~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
....+..+...++++.++......|.+++
T Consensus 318 l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd 356 (437)
T 3gre_A 318 LEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFS 356 (437)
T ss_dssp GGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEE
T ss_pred cccceecccccCCceEEEEECCceEEEecCCCCeEEEEE
Confidence 12234445555777777777667777765
No 252
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.23 E-value=4.6e-05 Score=78.51 Aligned_cols=181 Identities=9% Similarity=0.043 Sum_probs=115.0
Q ss_pred CCceEEEc-CCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcC-CeeeEEEeCCCCeEEEE
Q 019290 36 GPESLAFD-CNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCG-RPLGIKFNPVTCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d-~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~gi~~~~~~~~l~v~ 113 (343)
.+.+++++ ++|+.+.+.. .+.++.++..++....+. .... .+..++++ ++..|+++
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~s-dg~~l~~~ 354 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVP--------------------EPLRIRYVRRGGD-TKVAFIHG 354 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECS--------------------CCSCEEEEEECSS-SEEEEEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEcc--------------------CCCcceEEeeeEc-CCCeEEEE
Confidence 36789999 9998555544 788999988776544331 1112 34455566 45566666
Q ss_pred eCCCeEE-EEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 114 DAYFGLM-VVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 114 ~~~~gi~-~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
.....++ .++.++++.+.+. . . ...+..+++.+ ||+..+.... .+.|+.+|.++++
T Consensus 355 s~~~~l~~~~d~~~~~~~~l~-~-~---~~~~~~~~~Sp-DG~~la~~~~-----------------~~~v~~~d~~tg~ 411 (1045)
T 1k32_A 355 TREGDFLGIYDYRTGKAEKFE-E-N---LGNVFAMGVDR-NGKFAVVAND-----------------RFEIMTVDLETGK 411 (1045)
T ss_dssp ETTEEEEEEEETTTCCEEECC-C-C---CCSEEEEEECT-TSSEEEEEET-----------------TSEEEEEETTTCC
T ss_pred ECCCceEEEEECCCCCceEec-C-C---ccceeeeEECC-CCCEEEEECC-----------------CCeEEEEECCCCc
Confidence 5545688 8999888776653 1 1 13467899999 5765443222 4579999998888
Q ss_pred eEEee-cCCCCcceeEEecCCCEEEEEEcCC---------CeEEEEEccCccccccceeeecCCCCCCceeeCCCCC-EE
Q 019290 193 VTVMY-NGLSFPNGVALSNNNSFLLLAESAT---------LKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE-FW 261 (343)
Q Consensus 193 ~~~~~-~~~~~~~~i~~~~d~~~lyv~~~~~---------~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-lw 261 (343)
...+. ........++++|||+.|.++.... +.|++|++.+ ++...+.........++++++|+ |+
T Consensus 412 ~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~----g~~~~l~~~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 412 PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG----RKIFAATTENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT----TEEEECSCSSSBEEEEEECTTSCEEE
T ss_pred eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC----CcEEEeeCCCcccCCceEcCCCCEEE
Confidence 77665 3333457899999999887664422 5899999875 22222222111233467888886 55
Q ss_pred EEec
Q 019290 262 IAMN 265 (343)
Q Consensus 262 i~~~ 265 (343)
+++.
T Consensus 488 ~~s~ 491 (1045)
T 1k32_A 488 YLSY 491 (1045)
T ss_dssp EEES
T ss_pred EEec
Confidence 5554
No 253
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.21 E-value=0.00046 Score=61.30 Aligned_cols=182 Identities=10% Similarity=0.111 Sum_probs=99.2
Q ss_pred cCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC----CC---eEEEEeC
Q 019290 43 DCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV----TC---DLYIADA 115 (343)
Q Consensus 43 d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~----~~---~l~v~~~ 115 (343)
++...++......++|+.||.+++....+. .++++++.+.+. ++ .+++++.
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~----------------------~g~~nnVD~r~~~~l~g~~~dla~as~R 94 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSLDGKMLHSYN----------------------TGKLNNVDIRYDFPLNGKKVDIAAASNR 94 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEETTSCEEEEEC----------------------CSCEEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCCccEEEEEcCCCCEEEEcCCCcEEEEcc----------------------CCCcccEEEecccccCCceEeEEEEeCC
Confidence 445564333445678999999665554442 134555554430 11 3466655
Q ss_pred C---CeE--EEEeCCCCeEEEcccc--cCCCCccCcceeEE--eCCCCe--EEEEeCCcccccccceeeeeecCCCceEE
Q 019290 116 Y---FGL--MVVGPNGGQAQQLASS--AGGIPFRFTNDLDI--DPNTGI--VYFTDSSIYFQRRQYFMSIATGDRSGRLL 184 (343)
Q Consensus 116 ~---~gi--~~~d~~~~~~~~~~~~--~~~~~~~~~~~i~~--d~~dg~--l~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 184 (343)
. +.| +.+|+++++++.+... ........+.+++. ++..+. +|+++.. +.+.
T Consensus 95 ~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~------------------G~~~ 156 (355)
T 3amr_A 95 SEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE------------------GEFE 156 (355)
T ss_dssp STTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS------------------SEEE
T ss_pred CCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC------------------CeEE
Confidence 4 334 5558888877766332 10112356888888 764354 5554432 3333
Q ss_pred EEeC---CCCce----EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-----CCCCCCce
Q 019290 185 KYDP---LKKNV----TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-----MPRFPDNI 252 (343)
Q Consensus 185 ~~d~---~~~~~----~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~p~~i 252 (343)
.|+. ..+.+ .+-..-...+.++++++..+.||+++.. ..||+|+.+.... ...+.+.. +..-+.||
T Consensus 157 q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~-~~~~~v~~~~~g~l~aDvEGL 234 (355)
T 3amr_A 157 QYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGG-SNGTVIDRADGRHLTRDIEGL 234 (355)
T ss_dssp EEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSC-SCCEEEEEBSSSSBCSCEEEE
T ss_pred EEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCC-CCceEEEEecCCccccCcceE
Confidence 3222 22222 1112234568899999888899999875 5699999664321 12222221 12246788
Q ss_pred eeC--CCC--CEEEEecc
Q 019290 253 KSD--SKG--EFWIAMNS 266 (343)
Q Consensus 253 ~~d--~~G--~lwi~~~~ 266 (343)
++. ++| .|++++..
T Consensus 235 ai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 235 TIYYAADGKGYLMASSQG 252 (355)
T ss_dssp EEEECGGGCEEEEEEEGG
T ss_pred EEEecCCCCEEEEEEcCC
Confidence 874 444 46666654
No 254
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.21 E-value=0.0018 Score=57.26 Aligned_cols=159 Identities=11% Similarity=-0.007 Sum_probs=90.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++.++++ ++.++..++.|..||..++......... .......+..+++++++..|..+..
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~---------------~~~h~~~v~~v~~sp~~~~las~s~ 78 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLD---------------ETAHKKAIRSVAWRPHTSLLAAGSF 78 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEEC---------------TTCCCSCEEEEEECTTSSEEEEEET
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEe---------------cCCccCCEEEEEECCCCCEEEEEeC
Confidence 3567778776 6778888999999998765433221100 0012234678999984334445533
Q ss_pred CCeEEEEeCCCCeE-----EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC-
Q 019290 116 YFGLMVVGPNGGQA-----QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL- 189 (343)
Q Consensus 116 ~~gi~~~d~~~~~~-----~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~- 189 (343)
...|..++.++... +.+ ....+ ....+..+++.+ +|++.++... .+.|..+|..
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~-~~~~~-h~~~V~~v~~sp-~g~~las~s~-----------------D~~v~iwd~~~ 138 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLL-AIIEG-HENEVKGVAWSN-DGYYLATCSR-----------------DKSVWIWETDE 138 (330)
T ss_dssp TSCEEEEEC-------CCCEEE-EEEC-----CEEEEEECT-TSCEEEEEET-----------------TSCEEEEECCT
T ss_pred CCcEEEEEcccCcCccccceeE-EEEcC-CCCcEEEEEECC-CCCEEEEEeC-----------------CCEEEEEeccC
Confidence 33488888753211 111 11111 123578899999 5877665433 4567777763
Q ss_pred CC---ce-EEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 190 KK---NV-TVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 190 ~~---~~-~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.+ +. ..+.........++++|++..| ++...++.|..|+...
T Consensus 139 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 139 SGEEYECISVLQEHSQDVKHVIWHPSEALL-ASSSYDDTVRIWKDYD 184 (330)
T ss_dssp TCCCCEEEEEECCCSSCEEEEEECSSSSEE-EEEETTSCEEEEEEET
T ss_pred CCCCeEEEEEeccCCCceEEEEECCCCCEE-EEEcCCCeEEEEECCC
Confidence 22 11 2233334557889999998755 4555688999998654
No 255
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.21 E-value=0.00071 Score=60.07 Aligned_cols=183 Identities=9% Similarity=-0.042 Sum_probs=106.7
Q ss_pred CCCCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeEEEE
Q 019290 44 CNGEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVV 122 (343)
Q Consensus 44 ~~g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~ 122 (343)
.+++.+.++..++.|..||..+++.. .+..... ......|. +.-...++.+.+-+....+..+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v---------------~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPNP---------------RTGGEHPA-IISRGPCNRLLLLYPGNQITIL 109 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEECC---------------CTTCCCCS-EEEECSTTEEEEEETTTEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCCc---------------eeeeeCCc-eEEecCCCeEEEEEccCceEEe
Confidence 46777888899999999998776533 2221000 01111122 3333336676666655667778
Q ss_pred eCCCCeEEEcccccCCCCccCcceeEEeC--CCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeec--
Q 019290 123 GPNGGQAQQLASSAGGIPFRFTNDLDIDP--NTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYN-- 198 (343)
Q Consensus 123 d~~~~~~~~~~~~~~~~~~~~~~~i~~d~--~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-- 198 (343)
+.++++......... ...+..+++.+ . +.++++... .+.|..||..+++......
T Consensus 110 ~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~-~~~l~s~s~-----------------dg~i~~wd~~~~~~~~~~~~~ 168 (343)
T 3lrv_A 110 DSKTNKVLREIEVDS---ANEIIYMYGHNEVN-TEYFIWADN-----------------RGTIGFQSYEDDSQYIVHSAK 168 (343)
T ss_dssp ETTTCCEEEEEECCC---SSCEEEEECCC----CCEEEEEET-----------------TCCEEEEESSSSCEEEEECCC
T ss_pred ecCCcceeEEeecCC---CCCEEEEEcCCCCC-CCEEEEEeC-----------------CCcEEEEECCCCcEEEEEecC
Confidence 877776322211111 12477888888 6 666664432 4578888887776643332
Q ss_pred CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCCEEEEecc
Q 019290 199 GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 199 ~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.......++++|++..+ ++...++.|..||+..... . ...+.. ..+....+++.++|++.++...
T Consensus 169 ~~~~i~~~~~~pdg~~l-asg~~dg~i~iwd~~~~~~-~-~~~~~~~h~~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLL-ALYSPDGILDVYNLSSPDQ-A-SSRFPVDEEAKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp SSCCCCEEEECTTSCEE-EEECTTSCEEEEESSCTTS-C-CEECCCCTTSCEEEEEECTTSSEEEEEES
T ss_pred CCCceEEEEECCCCCEE-EEEcCCCEEEEEECCCCCC-C-ccEEeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 22347789999998754 4556789999999875322 1 012211 1222445778999987776654
No 256
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.21 E-value=0.00017 Score=63.43 Aligned_cols=161 Identities=14% Similarity=0.021 Sum_probs=92.1
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC--CCeEEEE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV--TCDLYIA 113 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~~~l~v~ 113 (343)
...+++++++|+.+.++..++.|..||..++....+.. .......+..+++.++ ++.|..+
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~-----------------l~gH~~~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIAD-----------------LRGHEGPVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEE-----------------EECCSSCEEEEEECCGGGSSCEEEE
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEE-----------------EcCCCccEEEEEeCCCCCCCEEEEE
Confidence 46789999999988888999999999987653221110 0112234677888642 3345555
Q ss_pred eCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCC-CeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 114 DAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNT-GIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 114 ~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~d-g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
.....|..+|.++++.+..... .+ ....++.+++.+.+ +.+.++... .+.|..+|..++.
T Consensus 78 s~D~~v~iWd~~~~~~~~~~~~-~~-h~~~V~~v~~~p~~~g~~lasgs~-----------------D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 78 SYDRKVIIWREENGTWEKSHEH-AG-HDSSVNSVCWAPHDYGLILACGSS-----------------DGAISLLTYTGEG 138 (316)
T ss_dssp ETTSCEEEECCSSSCCCEEEEE-CC-CSSCCCEEEECCTTTCSCEEEECS-----------------SSCEEEEEECSSS
T ss_pred ECCCEEEEEECCCCcceEEEEc-cC-CCCceEEEEECCCCCCcEEEEEcC-----------------CCCEEEEecCCCC
Confidence 4334488999887643222111 11 11357889998831 555554432 3456666654332
Q ss_pred -eEE---eecCCCCcceeEEecCC----------------CEEEEEEcCCCeEEEEEccC
Q 019290 193 -VTV---MYNGLSFPNGVALSNNN----------------SFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 193 -~~~---~~~~~~~~~~i~~~~d~----------------~~lyv~~~~~~~i~~~~~~~ 232 (343)
... +.........++++|+. ..++++...++.|..|++..
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 139 QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT
T ss_pred CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC
Confidence 211 11122234566777652 12455666778899998753
No 257
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.20 E-value=0.00048 Score=67.81 Aligned_cols=192 Identities=9% Similarity=0.013 Sum_probs=106.0
Q ss_pred CceEEEcCCCCeeEEE-ecCC----EEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEE
Q 019290 37 PESLAFDCNGEGPYVG-VSDG----RILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLY 111 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~-~~~g----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~ 111 (343)
..+++++|||+.+.+. ...| .|+.+|..+++........ ....++++++++..|+
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--------------------~~~~~~~wspDg~~l~ 186 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--------------------VKFSCMAWTHDGKGMF 186 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--------------------ECSCCEEECTTSSEEE
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--------------------cccceEEEEeCCCEEE
Confidence 4578899999965543 3333 7999999887665432100 0124578888556777
Q ss_pred EEeCCCe----------------EEEEeCCCCeEE--EcccccCCCCccCcceeEEeCCCCe-EEEEeCCccccccccee
Q 019290 112 IADAYFG----------------LMVVGPNGGQAQ--QLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFM 172 (343)
Q Consensus 112 v~~~~~g----------------i~~~d~~~~~~~--~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~ 172 (343)
++..... |+++++.+++.+ .+...... .....++.+.+ ||+ |+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~--~~~~~~~~~Sp-Dg~~l~~~~~~~--------- 254 (710)
T 2xdw_A 187 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE--PKWMGGAELSD-DGRYVLLSIREG--------- 254 (710)
T ss_dssp EEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC--TTCEEEEEECT-TSCEEEEEEECS---------
T ss_pred EEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC--CeEEEEEEEcC-CCCEEEEEEEcc---------
Confidence 7753322 899998876521 22111111 12345788888 566 44432210
Q ss_pred eeeecCCCceEEEEeCCC------C--ceEEeecCCCCcceeEEecCCCEEEEEEcC---CCeEEEEEccCcccccccee
Q 019290 173 SIATGDRSGRLLKYDPLK------K--NVTVMYNGLSFPNGVALSNNNSFLLLAESA---TLKILRFWLQGERTTYTPQL 241 (343)
Q Consensus 173 ~~~~~~~~~~v~~~d~~~------~--~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~---~~~i~~~~~~~~~~~~~~~~ 241 (343)
......|+.+|.++ + ..+.+....... ...++++|+.+|+.... ...|+++++++... ...+.
T Consensus 255 ----~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~~ 328 (710)
T 2xdw_A 255 ----CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE-SKWKV 328 (710)
T ss_dssp ----SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEE
T ss_pred ----CCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc-cccee
Confidence 00134688888765 4 345554333222 33578899988887653 34799999875321 12233
Q ss_pred eec-CC-CCCCceeeCCCCCEEEEecc
Q 019290 242 FAE-MP-RFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 242 ~~~-~~-~~p~~i~~d~~G~lwi~~~~ 266 (343)
+.. .. ....++...+++.++++...
T Consensus 329 l~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 329 LVPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp EECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred ccCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 322 11 11233455556667666544
No 258
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.20 E-value=0.0001 Score=72.58 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=51.2
Q ss_pred CceEEEcCCCCeeEEEec---------CCEEEEEEcCCCCe---EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEe
Q 019290 37 PESLAFDCNGEGPYVGVS---------DGRILKWKAANSGW---TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFN 104 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~---------~g~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (343)
..+++++|||+.+.++.. ++.|+.+|..+++. ..+ ......++++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-----------------------~~~~~~~~~S 118 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-----------------------PRPIQYLCWS 118 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-----------------------CSSBCCEEEC
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-----------------------CcccccceEC
Confidence 678999999996665544 57899999887653 111 1234568899
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCCeEEEcc
Q 019290 105 PVTCDLYIADAYFGLMVVGPNGGQAQQLA 133 (343)
Q Consensus 105 ~~~~~l~v~~~~~gi~~~d~~~~~~~~~~ 133 (343)
+++..|.++. .+.|+.++.++++...+.
T Consensus 119 PDG~~la~~~-~~~i~~~~~~~g~~~~l~ 146 (719)
T 1z68_A 119 PVGSKLAYVY-QNNIYLKQRPGDPPFQIT 146 (719)
T ss_dssp SSTTCEEEEE-TTEEEEESSTTSCCEECC
T ss_pred CCCCEEEEEE-CCeEEEEeCCCCCcEEEe
Confidence 9555676663 567999999888766553
No 259
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.20 E-value=0.0047 Score=58.67 Aligned_cols=219 Identities=11% Similarity=0.048 Sum_probs=117.7
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCe----------EEeeecCCCccccccCCCCCcccC-CCcCCeeeEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGW----------TEFATTAPHRAREICDGSTNTTLE-PLCGRPLGIKFN 104 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~gi~~~ 104 (343)
...+++++|||+.+-++..++.|. |+...+. ..|.+......-..-.+....... .....+..++++
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawS 94 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPS 94 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEEC
Confidence 578999999999555556666554 5554320 111111100000000011111111 113346789999
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCCeEEEcccccCC-CCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceE
Q 019290 105 PVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGG-IPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRL 183 (343)
Q Consensus 105 ~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~-~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v 183 (343)
|++..|-+++....+..++.++ ....+. ... .+...++++++.| ||++.++... .+.|
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~-~l~~l~--~~~~~~~~sv~svafSP-DG~~LAsgs~-----------------DGtV 153 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNK-MLTNLD--SKGNLSSRTYHCFEWNP-IESSIVVGNE-----------------DGEL 153 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTE-EEEECC--CSSCSTTTCEEEEEECS-SSSCEEEEET-----------------TSEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCc-eeeecc--CCCccccccEEEEEEcC-CCCEEEEEcC-----------------CCEE
Confidence 9555566665444488888653 333321 111 0123578999999 5775554332 4678
Q ss_pred EEEeCCCCce--------EEeecC----CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCcccccc-ceeeec-CCCCC
Q 019290 184 LKYDPLKKNV--------TVMYNG----LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYT-PQLFAE-MPRFP 249 (343)
Q Consensus 184 ~~~d~~~~~~--------~~~~~~----~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~-~~~~~~-~~~~p 249 (343)
-.||..++.. ..+... ......++++||| + ++...++.+..|++++... .+ ...+.. .....
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--L-aass~D~tVrlWd~~~~~~-~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--L-VAALSNNSVFSMTVSASSH-QPVSRMIQNASRRKI 229 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--E-EEEETTCCEEEECCCSSSS-CCCEEEEECCCSSCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--E-EEEeCCCeEEEEECCCCcc-ccceeeecccccCcE
Confidence 8888876642 333212 2357889999988 4 4455689999999876432 11 112211 11235
Q ss_pred CceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEee
Q 019290 250 DNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD 308 (343)
Q Consensus 250 ~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~ 308 (343)
..+++. |+..+++.. +.|..+|.++.....+.
T Consensus 230 ~svaFs--g~~LASa~~-------------------------~tIkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 230 TDLKIV--DYKVVLTCP-------------------------GYVHKIDLKNYSISSLK 261 (588)
T ss_dssp CCEEEE--TTEEEEECS-------------------------SEEEEEETTTTEEEEEE
T ss_pred EEEEEE--CCEEEEEeC-------------------------CeEEEEECCCCeEEEEE
Confidence 566665 455554433 37778888766654443
No 260
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.20 E-value=0.0012 Score=57.53 Aligned_cols=163 Identities=11% Similarity=0.027 Sum_probs=95.1
Q ss_pred CCceEEEcC--CCCeeEEEecCCEEEEEEcCCCCe-------EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 36 GPESLAFDC--NGEGPYVGVSDGRILKWKAANSGW-------TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 36 ~p~~l~~d~--~g~~l~~~~~~g~i~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
...++++.+ +++.+.++..++.|..||..++.. ..+.. .......+..++++++
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~-----------------~~~~~~~v~~~~~~~~ 121 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCT-----------------LNDSKGSLYSVKFAPA 121 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEE-----------------ECCCSSCEEEEEECCG
T ss_pred cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeee-----------------ecccCCceeEEEEcCC
Confidence 467899988 588788888999999999876431 11110 0122335678999984
Q ss_pred --CCeEEEEeCCCeEEEEeCCCCeEEEc---------ccccCCCCccCcceeEEeCC--CCeEEEEeCCcccccccceee
Q 019290 107 --TCDLYIADAYFGLMVVGPNGGQAQQL---------ASSAGGIPFRFTNDLDIDPN--TGIVYFTDSSIYFQRRQYFMS 173 (343)
Q Consensus 107 --~~~l~v~~~~~gi~~~d~~~~~~~~~---------~~~~~~~~~~~~~~i~~d~~--dg~l~v~~~~~~~~~~~~~~~ 173 (343)
+..++.+.....|..+|.++++.... ...........+..+++.+. ++.++++...
T Consensus 122 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~----------- 190 (351)
T 3f3f_A 122 HLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL----------- 190 (351)
T ss_dssp GGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-----------
T ss_pred CCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecC-----------
Confidence 34466664434489999876542110 00111112345677777772 1444443222
Q ss_pred eeecCCCceEEEEeCCCCceE---EeecCCCCcceeEEecCCC---EEEEEEcCCCeEEEEEccC
Q 019290 174 IATGDRSGRLLKYDPLKKNVT---VMYNGLSFPNGVALSNNNS---FLLLAESATLKILRFWLQG 232 (343)
Q Consensus 174 ~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~i~~~~d~~---~lyv~~~~~~~i~~~~~~~ 232 (343)
.+.+..++...++.. .+.........+++++++. .++++...++.|..|++..
T Consensus 191 ------~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 191 ------EQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp ------TEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred ------CCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 344544554445432 2222334567899999872 4556666788999999864
No 261
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.17 E-value=0.0016 Score=62.52 Aligned_cols=41 Identities=15% Similarity=0.113 Sum_probs=26.4
Q ss_pred CeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCC
Q 019290 292 PVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSV 334 (343)
Q Consensus 292 ~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~ 334 (343)
+.|+.+|. +|+++-.+..+.+.....+. ...+|++|++...
T Consensus 485 g~l~a~D~~tG~~lw~~~~~~~~~~~p~~--~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 485 GYLKALDNKDGKELWNFKMPSGGIGSPMT--YSFKGKQYIGSMY 526 (571)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEE--EEETTEEEEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCCcEeeeEE--EEECCEEEEEEEC
Confidence 58889996 68888777765442222222 2348999987653
No 262
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.16 E-value=0.00056 Score=61.59 Aligned_cols=154 Identities=10% Similarity=0.102 Sum_probs=95.0
Q ss_pred CCceEEEcC-CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC---CCeEE
Q 019290 36 GPESLAFDC-NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV---TCDLY 111 (343)
Q Consensus 36 ~p~~l~~d~-~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~---~~~l~ 111 (343)
...++++.+ +++.++++..++.|..||..+++...... .......+.+.+. ...+.
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~ 160 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN--------------------FEETVYSHHMSPVSTKHCLVA 160 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE--------------------CSSCEEEEEECSSCSSCCEEE
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc--------------------CCCceeeeEeecCCCCCcEEE
Confidence 467899999 67777788889999999998765443321 1112345666552 22455
Q ss_pred EEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCCC
Q 019290 112 IADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK 190 (343)
Q Consensus 112 v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 190 (343)
++.....|..+|.++++........ ...+..+++.+. +. ++++... .+.|..||..+
T Consensus 161 ~~~~~~~v~~~d~~~~~~~~~~~~~----~~~v~~~~~~~~-~~~ll~~~~~-----------------dg~i~i~d~~~ 218 (408)
T 4a11_B 161 VGTRGPKVQLCDLKSGSCSHILQGH----RQEILAVSWSPR-YDYILATASA-----------------DSRVKLWDVRR 218 (408)
T ss_dssp EEESSSSEEEEESSSSCCCEEECCC----CSCEEEEEECSS-CTTEEEEEET-----------------TSCEEEEETTC
T ss_pred EEcCCCeEEEEeCCCcceeeeecCC----CCcEEEEEECCC-CCcEEEEEcC-----------------CCcEEEEECCC
Confidence 5544444999999876543222211 135778999984 65 4543322 45677777654
Q ss_pred Cc--eEEe---------------ecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 191 KN--VTVM---------------YNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 191 ~~--~~~~---------------~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
+. ...+ .........++++++++.++.+. .++.|..|++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~ 276 (408)
T 4a11_B 219 ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSSN 276 (408)
T ss_dssp SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT
T ss_pred CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec-CCCeEEEEECCC
Confidence 32 1111 11223457889999988766554 578899999875
No 263
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.15 E-value=3.7e-05 Score=75.70 Aligned_cols=139 Identities=12% Similarity=0.046 Sum_probs=89.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
.+.++.+.++|. +++...++.|+.+|..+++...+...... .......++++++++.|.++..
T Consensus 17 ~~~~~~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~~~----------------~~~~~~~~~~SpDg~~la~~~~ 79 (719)
T 1z68_A 17 KTFFPNWISGQE-YLHQSADNNIVLYNIETGQSYTILSNRTM----------------KSVNASNYGLSPDRQFVYLESD 79 (719)
T ss_dssp CCCCCEESSSSE-EEEECTTSCEEEEESSSCCEEEEECHHHH----------------HTTTCSEEEECTTSSEEEEEEE
T ss_pred CCCccEECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEccccc----------------cccceeeEEECCCCCeEEEEec
Confidence 355889999997 44445688999999988776655321100 0012457889985556666643
Q ss_pred ---------CCeEEEEeCCCCeE---EEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCce
Q 019290 116 ---------YFGLMVVGPNGGQA---QQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 116 ---------~~gi~~~d~~~~~~---~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
...|+.+|.++++. ..+. ..+..+++.| ||+ |.++. .+.
T Consensus 80 ~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~--------~~~~~~~~SP-DG~~la~~~-------------------~~~ 131 (719)
T 1z68_A 80 YSKLWRYSYTATYYIYDLSNGEFVRGNELP--------RPIQYLCWSP-VGSKLAYVY-------------------QNN 131 (719)
T ss_dssp EEECSSSCEEEEEEEEETTTTEECCSSCCC--------SSBCCEEECS-STTCEEEEE-------------------TTE
T ss_pred CceeEEeecceEEEEEECCCCccccceecC--------cccccceECC-CCCEEEEEE-------------------CCe
Confidence 13489999998876 3221 2367789999 575 44432 346
Q ss_pred EEEEeCCCCceEEeecCCC-------------------CcceeEEecCCCEEEEEE
Q 019290 183 LLKYDPLKKNVTVMYNGLS-------------------FPNGVALSNNNSFLLLAE 219 (343)
Q Consensus 183 v~~~d~~~~~~~~~~~~~~-------------------~~~~i~~~~d~~~lyv~~ 219 (343)
|+.++..+++...+..... ...+++++|||+.|+++.
T Consensus 132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 8888887776655432221 124799999999887754
No 264
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.14 E-value=0.0026 Score=56.86 Aligned_cols=227 Identities=10% Similarity=-0.025 Sum_probs=122.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+++++++|+.+.++.. .++..|+.++.+...... . .....+.+....+.+.++..
T Consensus 21 ~V~~v~fs~dg~~la~g~~-~~~~iw~~~~~~~~~~~~-------------------~--~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTL-KSFEIYNVHPVAHIMSQE-------------------M--RHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp CCCEEEECTTSSEEEEECS-SEEEEEEETTEEEEEEEE-------------------C--SCCCEEEECTTSSEEEEECS
T ss_pred ceEEEEECCCCCEEEEEcC-CEEEEEecCCcceeeeee-------------------c--CCeEEEEEcCCCCEEEEEEC
Confidence 5789999999996656554 457788866543221110 0 01234555553455544433
Q ss_pred C-CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCC-ce
Q 019290 116 Y-FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKK-NV 193 (343)
Q Consensus 116 ~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~~ 193 (343)
. ..|..+|..+++....... . ..+..+.+++ +.+.++. .+.|..||..++ +.
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~~--~---~~v~~v~~~~--~~~~~~~-------------------~~~i~i~d~~~~~~~ 132 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIKV--D---APVKDLFLSR--EFIVVSY-------------------GDVISVFKFGNPWKR 132 (355)
T ss_dssp STTEEEEEETTTTEEEEEEEC--S---SCEEEEEECS--SEEEEEE-------------------TTEEEEEESSTTCCB
T ss_pred CccEEEEEECCCCcEEEEEEC--C---CceEEEEEcC--CEEEEEE-------------------cCEEEEEECCCCcee
Confidence 3 3589999988865432221 1 2466778877 3555533 245777887654 22
Q ss_pred -EEeecCCCCcce-eEEecCCCEEEEE-EcCCCeEEEEEccCcccc-----c-------c-ceeeecCCCCCCceeeCCC
Q 019290 194 -TVMYNGLSFPNG-VALSNNNSFLLLA-ESATLKILRFWLQGERTT-----Y-------T-PQLFAEMPRFPDNIKSDSK 257 (343)
Q Consensus 194 -~~~~~~~~~~~~-i~~~~d~~~lyv~-~~~~~~i~~~~~~~~~~~-----~-------~-~~~~~~~~~~p~~i~~d~~ 257 (343)
..+.. +.+ .++++ ..+.++ ....+.|..|++...... . . ...+....+....++++++
T Consensus 133 ~~~~~~----~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~ 206 (355)
T 3vu4_A 133 ITDDIR----FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK 206 (355)
T ss_dssp SSCCEE----EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT
T ss_pred eEEecc----CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC
Confidence 12111 333 34444 445554 567889999998752200 0 0 1222111222345778999
Q ss_pred CCEEEEeccCCCccccccccccccccCCCcccCCCe-EEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCC
Q 019290 258 GEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPV-GVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSV 334 (343)
Q Consensus 258 G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~ 334 (343)
|++.++... .+. |..+|. +++.+..+... .....+..+... ++++.++...
T Consensus 207 g~~l~s~s~------------------------d~~~v~iwd~~~~~~~~~~~~g--~h~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 207 SDMVATCSQ------------------------DGTIIRVFKTEDGVLVREFRRG--LDRADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp SSEEEEEET------------------------TCSEEEEEETTTCCEEEEEECT--TCCSCEEEEEECTTSCEEEEEET
T ss_pred CCEEEEEeC------------------------CCCEEEEEECCCCcEEEEEEcC--CCCCcEEEEEECCCCCEEEEEEC
Confidence 988777665 344 666776 46766666521 012345555444 5555555555
Q ss_pred CCeEEEEc
Q 019290 335 QPYVVVIK 342 (343)
Q Consensus 335 ~~~i~~~~ 342 (343)
...|.+++
T Consensus 261 d~~v~iw~ 268 (355)
T 3vu4_A 261 KWTLHVFE 268 (355)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEE
Confidence 55666554
No 265
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.12 E-value=0.00051 Score=61.02 Aligned_cols=187 Identities=18% Similarity=0.253 Sum_probs=108.2
Q ss_pred CCeEEEEe-CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCC---CC----eEEEEeCCcccccccceeeeeecC
Q 019290 107 TCDLYIAD-AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPN---TG----IVYFTDSSIYFQRRQYFMSIATGD 178 (343)
Q Consensus 107 ~~~l~v~~-~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~---dg----~l~v~~~~~~~~~~~~~~~~~~~~ 178 (343)
...+++++ ...||+.||+++..++.+.. ..+|.+.+.+. .| .+++++... +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~-------g~~nnVD~r~~~~l~g~~~dla~as~R~~-------------~~ 98 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT-------GKLNNVDIRYDFPLNGKKVDIAAASNRSE-------------GK 98 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC-------SCEEEEEEEEEEEETTEEEEEEEEEECST-------------TC
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC-------CCcccEEEecccccCCceEeEEEEeCCCC-------------CC
Confidence 34556653 34689999996555554421 23555555541 01 245555320 01
Q ss_pred CCceEEEEeCCCCceEEee-------cCCCCcceeEE--ecCCC--EEEEEEcCCCeEEEEEccC--ccccccceeee--
Q 019290 179 RSGRLLKYDPLKKNVTVMY-------NGLSFPNGVAL--SNNNS--FLLLAESATLKILRFWLQG--ERTTYTPQLFA-- 243 (343)
Q Consensus 179 ~~~~v~~~d~~~~~~~~~~-------~~~~~~~~i~~--~~d~~--~lyv~~~~~~~i~~~~~~~--~~~~~~~~~~~-- 243 (343)
..-.+|.+|++++.+..+. ..+..+.|+|+ ++..+ ++|+++ .++.+..|++.. +.. ...+.+.
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~-k~G~~~q~~l~~~~~g~-~~~~lVR~f 176 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG-KEGEFEQYELKADKNGY-ISGKKVRAF 176 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC-SSSEEEEEEEEECTTSC-EEEEEEEEE
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC-CCCeEEEEEEEeCCCCc-ccceEEEEe
Confidence 1234666788877776552 33477899999 55444 456655 468999988742 211 1112221
Q ss_pred cCCCCCCceeeCC-CCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC--CC----CEEEEeeCCCCCccC
Q 019290 244 EMPRFPDNIKSDS-KGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV--NG----NVVDVLDGNEGNTLN 316 (343)
Q Consensus 244 ~~~~~p~~i~~d~-~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~--~g----~~~~~~~~~~~~~~~ 316 (343)
.+.+.|.++++|+ .|.||++... .+|.+|+. ++ +.+..+. .+....
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd-------------------------~GIw~~da~p~~~~~~~~v~~~~--~g~l~a 229 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEED-------------------------EAIWKFSAEPDGGSNGTVIDRAD--GRHLTR 229 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETT-------------------------TEEEEEECSTTSCSCCEEEEEBS--SSSBCS
T ss_pred cCCCCcceEEEcCCCCeEEEeccc-------------------------ceEEEEeCCcCCCCCceEEEEec--CCcccc
Confidence 2455688999986 5899999875 37899984 33 2333332 121222
Q ss_pred CceeEEEe-----CCEEEEecCCCCeEEEEc
Q 019290 317 SVSEVQEY-----GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 317 ~~~~~~~~-----~g~l~i~~~~~~~i~~~~ 342 (343)
.+.++..+ .++|++++-..++..+|+
T Consensus 230 DvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 230 DIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp CEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred CcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 34444332 257999998888888886
No 266
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.12 E-value=3.1e-05 Score=72.87 Aligned_cols=122 Identities=16% Similarity=0.222 Sum_probs=81.9
Q ss_pred cCCeeeEEEeCCCCeEEEEeCC---------------------Ce-EEEEeCCCC-----e--EEEcccc--c-------
Q 019290 95 CGRPLGIKFNPVTCDLYIADAY---------------------FG-LMVVGPNGG-----Q--AQQLASS--A------- 136 (343)
Q Consensus 95 ~~~p~gi~~~~~~~~l~v~~~~---------------------~g-i~~~d~~~~-----~--~~~~~~~--~------- 136 (343)
..+|.++.+++.++.+|++-+. .| |+++..+.+ . +..+... .
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 4479999999878899998432 14 888875432 1 2322110 0
Q ss_pred --------CCCCccCcceeEEeCCCCeEEE-EeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecC--CCCcce
Q 019290 137 --------GGIPFRFTNDLDIDPNTGIVYF-TDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNG--LSFPNG 205 (343)
Q Consensus 137 --------~~~~~~~~~~i~~d~~dg~l~v-~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~ 205 (343)
....++.|++|++|+ +|.||| +|... +.. ...++.....||++++.+++++++... ...++|
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~--~~~----g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnG 535 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDS--SNA----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTG 535 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCC--CCS----GGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEE
T ss_pred ccCccCccccCccCCCCceEECC-CCCEEEEeCCCc--Ccc----ccccccCCceEEEEeCCCCeEEEEEeCCCCccccC
Confidence 112478899999999 599999 55431 100 000122345799999988998887643 356899
Q ss_pred eEEecCCCEEEEEEcCCC
Q 019290 206 VALSNNNSFLLLAESATL 223 (343)
Q Consensus 206 i~~~~d~~~lyv~~~~~~ 223 (343)
++++||+++|||+-+..+
T Consensus 536 iafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 536 ISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp EEECTTSSEEEEEEESTT
T ss_pred CEECCCCCEEEEEEeCCC
Confidence 999999999999865443
No 267
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.09 E-value=0.00044 Score=61.21 Aligned_cols=201 Identities=11% Similarity=0.015 Sum_probs=108.1
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEE--eCCCCe-EEE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKF--NPVTCD-LYI 112 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~--~~~~~~-l~v 112 (343)
...++++.++++.++++..++.|..||..+++...+.. ....+..+.+ ++ ++. ++.
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--------------------~~~~v~~~~~~~~~-~~~~l~~ 146 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ--------------------HDAPVKTIHWIKAP-NYSCVMT 146 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------CSSCEEEEEEEECS-SCEEEEE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc--------------------ccCceEEEEEEeCC-CCCEEEE
Confidence 46789999999988888899999999998876544321 1234567888 66 555 555
Q ss_pred EeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCC-------CCeEEEEeCCccc---cc---------------
Q 019290 113 ADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPN-------TGIVYFTDSSIYF---QR--------------- 167 (343)
Q Consensus 113 ~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-------dg~l~v~~~~~~~---~~--------------- 167 (343)
+.....|..+|.++++......... .+..+..... ++.+.+-+..... ..
T Consensus 147 ~~~dg~i~vwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (368)
T 3mmy_A 147 GSWDKTLKFWDTRSSNPMMVLQLPE-----RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221 (368)
T ss_dssp EETTSEEEEECSSCSSCSEEEECSS-----CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEE
T ss_pred ccCCCcEEEEECCCCcEEEEEecCC-----CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEc
Confidence 5433448999988765322211110 1111122210 1222221111000 00
Q ss_pred --cc-ceeeeeecCCCceEEEEeCCCCce----EEeecCCC------------CcceeEEecCCCEEEEEEcCCCeEEEE
Q 019290 168 --RQ-YFMSIATGDRSGRLLKYDPLKKNV----TVMYNGLS------------FPNGVALSNNNSFLLLAESATLKILRF 228 (343)
Q Consensus 168 --~~-~~~~~~~~~~~~~v~~~d~~~~~~----~~~~~~~~------------~~~~i~~~~d~~~lyv~~~~~~~i~~~ 228 (343)
.. ....+..+...+.|..++...... ..+..... ....++++++++.|+.+ ..++.|..|
T Consensus 222 ~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-~~dg~i~iw 300 (368)
T 3mmy_A 222 KDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV-GSDGRFSFW 300 (368)
T ss_dssp ECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEE-ETTSCEEEE
T ss_pred ccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEE-ccCCeEEEE
Confidence 00 000022333355677777654421 12221111 46789999999876655 467899999
Q ss_pred EccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 229 WLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
++..... ...+.........++++++|++.++...
T Consensus 301 d~~~~~~---~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 301 DKDARTK---LKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp ETTTTEE---EEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred ECCCCcE---EEEecCCCCCceEEEECCCCCeEEEEec
Confidence 9875211 1222112223455788999976666543
No 268
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.09 E-value=0.00021 Score=71.00 Aligned_cols=194 Identities=14% Similarity=0.122 Sum_probs=111.9
Q ss_pred CCceEEEcCC--CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC--CCeEE
Q 019290 36 GPESLAFDCN--GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV--TCDLY 111 (343)
Q Consensus 36 ~p~~l~~d~~--g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~~~l~ 111 (343)
...++++.++ |+.+.++..+|.|..||..++........ ......+..++++++ +..++
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~-----------------~~h~~~V~~v~~sp~~~~~~l~ 117 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH-----------------AVHSASVNSVQWAPHEYGPLLL 117 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEE-----------------CCCSSCEEEEEECCGGGCSEEE
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccc-----------------cCCCCCeEEEEECCCCCCCEEE
Confidence 4668899877 88888889999999999887653333211 122335678999984 34566
Q ss_pred EEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCC------------CCeEEEEeCCcccccccceeeeeecCC
Q 019290 112 IADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPN------------TGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 112 v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~------------dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
++.....|..+|.+++........ .. ....+..+++.+. ++.+.++...
T Consensus 118 sgs~dg~I~vwdl~~~~~~~~~~~-~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~----------------- 178 (753)
T 3jro_A 118 VASSDGKVSVVEFKENGTTSPIII-DA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA----------------- 178 (753)
T ss_dssp EEETTSEEEEEECCSSSCCCCEEE-EC-CSSCEEEEEECCCC---------CGGGCCEEEEET-----------------
T ss_pred EEeCCCcEEEEEeecCCCcceeEe-ec-CCCceEEEEecCcccccccccccCCCCCEEEEEEC-----------------
Confidence 664444488999876632111111 01 1134677777772 1444443222
Q ss_pred CceEEEEeCCCCc----e-EEeecCCCCcceeEEecC---CCEEEEEEcCCCeEEEEEccCccccccceeee--cCCCCC
Q 019290 180 SGRLLKYDPLKKN----V-TVMYNGLSFPNGVALSNN---NSFLLLAESATLKILRFWLQGERTTYTPQLFA--EMPRFP 249 (343)
Q Consensus 180 ~~~v~~~d~~~~~----~-~~~~~~~~~~~~i~~~~d---~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~p 249 (343)
.+.|..||..++. . ..+.........++++|+ +. +.++...++.|..|++............. ...+..
T Consensus 179 dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v 257 (753)
T 3jro_A 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL 257 (753)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCC
T ss_pred CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCce
Confidence 4556667654432 1 122233455788999998 55 44555668899999987532100111111 122335
Q ss_pred CceeeCCCCCEEEEecc
Q 019290 250 DNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 250 ~~i~~d~~G~lwi~~~~ 266 (343)
..++++++|++.++...
T Consensus 258 ~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 258 WRASWSLSGNVLALSGG 274 (753)
T ss_dssp CCEEECTTTCCEEEECS
T ss_pred EEEEEcCCCCEEEEEcC
Confidence 56788999876665544
No 269
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.09 E-value=0.00016 Score=66.78 Aligned_cols=143 Identities=10% Similarity=0.109 Sum_probs=85.5
Q ss_pred CeeeEEEeCCCCe-EEEEeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeee
Q 019290 97 RPLGIKFNPVTCD-LYIADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSI 174 (343)
Q Consensus 97 ~p~gi~~~~~~~~-l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~ 174 (343)
.+..++++|.+++ |..+. .+| |..+|.++++........ + ....++++++.|.++.++++...
T Consensus 121 ~V~~l~~~P~~~~~lasGs-~dg~i~lWd~~~~~~~~~~~~~-g-H~~~V~~l~f~p~~~~~l~s~s~------------ 185 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGS-KGGDIMLWNFGIKDKPTFIKGI-G-AGGSITGLKFNPLNTNQFYASSM------------ 185 (435)
T ss_dssp CEEEEEECSSCTTCEEEEE-TTSCEEEECSSCCSCCEEECCC-S-SSCCCCEEEECSSCTTEEEEECS------------
T ss_pred CEEEEEEeCCCCCEEEEEe-CCCEEEEEECCCCCceeEEEcc-C-CCCCEEEEEEeCCCCCEEEEEeC------------
Confidence 4678999974454 55554 445 899998776543332211 1 12458899999744666665543
Q ss_pred eecCCCceEEEEeCCCCceEEeecCC---CCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCc
Q 019290 175 ATGDRSGRLLKYDPLKKNVTVMYNGL---SFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDN 251 (343)
Q Consensus 175 ~~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~ 251 (343)
.+.|..+|.+++....+...- .....+++++++..++ +....+.|..|++.+.. ...+.........
T Consensus 186 -----D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~g~~dg~i~~wd~~~~~----~~~~~~h~~~v~~ 255 (435)
T 4e54_B 186 -----EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVV-TGDNVGNVILLNMDGKE----LWNLRMHKKKVTH 255 (435)
T ss_dssp -----SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEE-EECSSSBEEEEESSSCB----CCCSBCCSSCEEE
T ss_pred -----CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEE-EEeCCCcEeeeccCcce----eEEEecccceEEe
Confidence 456888888766655443321 2346788999988554 55668899999986522 2222111122344
Q ss_pred eeeCCCCC-EEEEe
Q 019290 252 IKSDSKGE-FWIAM 264 (343)
Q Consensus 252 i~~d~~G~-lwi~~ 264 (343)
+++.+++. +.++.
T Consensus 256 v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 256 VALNPCCDWFLATA 269 (435)
T ss_dssp EEECTTCSSEEEEE
T ss_pred eeecCCCceEEEEe
Confidence 67777775 44443
No 270
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.07 E-value=0.0018 Score=59.33 Aligned_cols=167 Identities=13% Similarity=0.083 Sum_probs=95.6
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcC---CCCeEEeeecCCCccccccCCCCCcccCC--CcCCeeeEE--EeCCCC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAA---NSGWTEFATTAPHRAREICDGSTNTTLEP--LCGRPLGIK--FNPVTC 108 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~gi~--~~~~~~ 108 (343)
...++++.++++.+.++..++.|..||.. +++............ . ...+ .......+. ..+++.
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~--~-------~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRK--I-------NLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEE--E-------EGGGGSSCCCEEEEEEEECSSCE
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEE--E-------EccCcccccCceEEEEEEcCCCC
Confidence 57799999999988888999999999873 333222211000000 0 0000 112233444 335233
Q ss_pred eEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 109 DLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 109 ~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
.++.+.....|..+|.++++......... ....+..+++++ ++.+.++... .+.|..||.
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~s~-~~~~l~s~~~-----------------dg~i~iwd~ 243 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSP--RHGAVSSICIDE-ECCVLILGTT-----------------RGIIDIWDI 243 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCG--GGCCEEEEEECT-TSCEEEEEET-----------------TSCEEEEET
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCC--CCCceEEEEECC-CCCEEEEEcC-----------------CCeEEEEEc
Confidence 45555443459999998876543322210 124578999999 4776664432 456888888
Q ss_pred CCCceEEee--cCCCCcceeEEec----CCCEEEEEEcCCCeEEEEEccC
Q 019290 189 LKKNVTVMY--NGLSFPNGVALSN----NNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 189 ~~~~~~~~~--~~~~~~~~i~~~~----d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.+++..... ........+++.+ ++. +.++...++.|..|++..
T Consensus 244 ~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 244 RFNVLIRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp TTTEEEEEEBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTT
T ss_pred CCccEEEEEecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCC
Confidence 766653322 2223345665543 443 555666788899999864
No 271
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.06 E-value=0.0023 Score=56.54 Aligned_cols=160 Identities=11% Similarity=0.083 Sum_probs=91.2
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCC-----eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSG-----WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
...++++.++|+.+.++..++.|..|+..+.. ..... ........+..+++++++..|
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~-----------------~~~~h~~~V~~v~~sp~g~~l 122 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLA-----------------IIEGHENEVKGVAWSNDGYYL 122 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEE-----------------EEC----CEEEEEECTTSCEE
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEE-----------------EEcCCCCcEEEEEECCCCCEE
Confidence 46789999999988888899999999875321 11110 001122346789999843344
Q ss_pred EEEeCCCeEEEEeCCC-Ce-EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 111 YIADAYFGLMVVGPNG-GQ-AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 111 ~v~~~~~gi~~~d~~~-~~-~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
..+.....|..+|.+. ++ .+.+. ...+ ....+..+++.| ++.+.++... .+.|..+|.
T Consensus 123 as~s~D~~v~iwd~~~~~~~~~~~~-~~~~-h~~~v~~v~~~p-~~~~l~s~s~-----------------D~~i~iW~~ 182 (330)
T 2hes_X 123 ATCSRDKSVWIWETDESGEEYECIS-VLQE-HSQDVKHVIWHP-SEALLASSSY-----------------DDTVRIWKD 182 (330)
T ss_dssp EEEETTSCEEEEECCTTCCCCEEEE-EECC-CSSCEEEEEECS-SSSEEEEEET-----------------TSCEEEEEE
T ss_pred EEEeCCCEEEEEeccCCCCCeEEEE-Eecc-CCCceEEEEECC-CCCEEEEEcC-----------------CCeEEEEEC
Confidence 4443333488888842 21 12111 1111 113578899999 5777665433 345655655
Q ss_pred CCCce---EEeecCCCCcceeEEecCCC-EEEEEEcCCCeEEEEEccC
Q 019290 189 LKKNV---TVMYNGLSFPNGVALSNNNS-FLLLAESATLKILRFWLQG 232 (343)
Q Consensus 189 ~~~~~---~~~~~~~~~~~~i~~~~d~~-~lyv~~~~~~~i~~~~~~~ 232 (343)
.++.. ..+.........+++++++. ...++...++.|..|++.+
T Consensus 183 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 43422 22333334567888988732 2445556788999998764
No 272
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.05 E-value=0.00078 Score=58.55 Aligned_cols=194 Identities=12% Similarity=0.102 Sum_probs=104.6
Q ss_pred CceEEEcC--CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC--CCeEEE
Q 019290 37 PESLAFDC--NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV--TCDLYI 112 (343)
Q Consensus 37 p~~l~~d~--~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~~~l~v 112 (343)
..++++.+ +|+.+.++..++.|..||..++....+.. .......+..+++.++ +..|..
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~-----------------~~~h~~~v~~v~~~p~~~g~~l~s 118 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAV-----------------HAVHSASVNSVQWAPHEYGPMLLV 118 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEE-----------------ECCCSSCEEEEEECCGGGCSEEEE
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEE-----------------eecCCCceeEEEeCcCCCCcEEEE
Confidence 45788865 48878888899999999987654221110 0011234678888873 234555
Q ss_pred EeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCC------------CCeEEEEeCCcccccccceeeeeecCCC
Q 019290 113 ADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPN------------TGIVYFTDSSIYFQRRQYFMSIATGDRS 180 (343)
Q Consensus 113 ~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~------------dg~l~v~~~~~~~~~~~~~~~~~~~~~~ 180 (343)
+.....|..+|.+++..... ....+ ....++.+++.+. +++++++... .
T Consensus 119 ~s~d~~v~~wd~~~~~~~~~-~~~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~-----------------D 179 (297)
T 2pm7_B 119 ASSDGKVSVVEFKENGTTSP-IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------D 179 (297)
T ss_dssp EETTSEEEEEEBCSSSCBCC-EEEEC-CSSCEEEEEECCCC------------CCEEEEEET-----------------T
T ss_pred EECCCcEEEEEecCCCceee-eeeec-ccCccceEeecCCcccccccCCCCCCcceEEEEcC-----------------C
Confidence 54444488888875421100 00001 1134667777762 0233433221 3
Q ss_pred ceEEEEeCCCCc----e-EEeecCCCCcceeEEecCC--CEEEEEEcCCCeEEEEEccCccccccceeee--cCCCCCCc
Q 019290 181 GRLLKYDPLKKN----V-TVMYNGLSFPNGVALSNNN--SFLLLAESATLKILRFWLQGERTTYTPQLFA--EMPRFPDN 251 (343)
Q Consensus 181 ~~v~~~d~~~~~----~-~~~~~~~~~~~~i~~~~d~--~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~p~~ 251 (343)
+.|..+|..+++ . ..+.........++++|++ ..+.++.+.++.|..|++...........+. ........
T Consensus 180 ~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~ 259 (297)
T 2pm7_B 180 NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR 259 (297)
T ss_dssp SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEE
T ss_pred CcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEE
Confidence 445555544333 1 1233334457889999985 4566677778999999986521100111111 11111234
Q ss_pred eeeCCCCCEEEEecc
Q 019290 252 IKSDSKGEFWIAMNS 266 (343)
Q Consensus 252 i~~d~~G~lwi~~~~ 266 (343)
++++++|++.++...
T Consensus 260 ~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 260 ASWSLSGNVLALSGG 274 (297)
T ss_dssp EEECSSSCCEEEEET
T ss_pred EEECCCCCEEEEEcC
Confidence 567888977666544
No 273
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.00 E-value=0.0011 Score=60.45 Aligned_cols=199 Identities=14% Similarity=0.127 Sum_probs=112.3
Q ss_pred CCceEEEcC--CCCeeEEEecCC----EEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC--C
Q 019290 36 GPESLAFDC--NGEGPYVGVSDG----RILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV--T 107 (343)
Q Consensus 36 ~p~~l~~d~--~g~~l~~~~~~g----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~--~ 107 (343)
...+|++|+ .+. +|++...+ +|++.+..+..|+.+........ .. + ............+++++. .
T Consensus 56 ~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~-~~--~---~~~~~~~~~i~~l~~~~~~~~ 128 (394)
T 3b7f_A 56 TIHHIVQDPREPER-MLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNK-AP--E---GETGRVVDHVFWLTPGHASEP 128 (394)
T ss_dssp EEEEEEECSSSTTC-EEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCC-CC---------CCCCCEEEEEEECCTTST
T ss_pred ceEEEEECCCCCCe-EEEEecCCCCCccEEEeCCCCCCceECCccccCCC-cc--c---ccccccccceeEEEeCCCCCC
Confidence 578999998 455 88887777 89998877778887642110000 00 0 000001123456788752 5
Q ss_pred CeEEEEeCCCeEEEEeCCCCeEEEccccc--C------------CCCccCcceeEEeCC-CCeEEEEeCCccccccccee
Q 019290 108 CDLYIADAYFGLMVVGPNGGQAQQLASSA--G------------GIPFRFTNDLDIDPN-TGIVYFTDSSIYFQRRQYFM 172 (343)
Q Consensus 108 ~~l~v~~~~~gi~~~d~~~~~~~~~~~~~--~------------~~~~~~~~~i~~d~~-dg~l~v~~~~~~~~~~~~~~ 172 (343)
+.||++....+|++.+-.+..++.+.... . ......+..|++|+. .+.+|++..
T Consensus 129 ~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~----------- 197 (394)
T 3b7f_A 129 GTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS----------- 197 (394)
T ss_dssp TCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-----------
T ss_pred CEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-----------
Confidence 78999866678999876656666653211 0 011234568889862 368999653
Q ss_pred eeeecCCCceEEEEeCCCCceEEeecCC-------------CCcceeEEecC-CCEEEEEEcCCCeEEEEEccCcccccc
Q 019290 173 SIATGDRSGRLLKYDPLKKNVTVMYNGL-------------SFPNGVALSNN-NSFLLLAESATLKILRFWLQGERTTYT 238 (343)
Q Consensus 173 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~-------------~~~~~i~~~~d-~~~lyv~~~~~~~i~~~~~~~~~~~~~ 238 (343)
.++|++.+..+...+.+.... .....++++++ .+.+|+.. .+.|++.+-.+ ..
T Consensus 198 -------~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G----~t 264 (394)
T 3b7f_A 198 -------SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRRE----GV 264 (394)
T ss_dssp -------TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTT----TE
T ss_pred -------CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCC----Cc
Confidence 246888765545555443211 12356777764 36788865 46788876444 22
Q ss_pred ceeeec-CCC----CCCceeeCC--CCCEEEEec
Q 019290 239 PQLFAE-MPR----FPDNIKSDS--KGEFWIAMN 265 (343)
Q Consensus 239 ~~~~~~-~~~----~p~~i~~d~--~G~lwi~~~ 265 (343)
.+.+.. ++. ....+++|+ .+.+|+++.
T Consensus 265 W~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 265 WKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp EECGGGGSCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred ceECCCCCCCCCccceEEEEECCCCCCEEEEEec
Confidence 222211 111 111356664 578999864
No 274
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.99 E-value=0.0041 Score=60.91 Aligned_cols=39 Identities=10% Similarity=0.003 Sum_probs=25.4
Q ss_pred CeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEec
Q 019290 292 PVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGS 332 (343)
Q Consensus 292 ~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~ 332 (343)
+.++.+|. +|+++..+..+.+.....++. ..+|+.|++.
T Consensus 498 g~l~a~D~~tG~~lw~~~~~~~~~~~p~~y--~~~G~~~v~~ 537 (677)
T 1kb0_A 498 GRLVAYHAATGEKLWEAPTGTGVVAAPSTY--MVDGRQYVSV 537 (677)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEE
T ss_pred CcEEEEECCCCceeeeeeCCCCcccCCEEE--EeCCEEEEEE
Confidence 58889996 699988887765532222222 3477877653
No 275
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.98 E-value=0.0096 Score=54.51 Aligned_cols=221 Identities=14% Similarity=0.154 Sum_probs=121.1
Q ss_pred EEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeE
Q 019290 40 LAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGL 119 (343)
Q Consensus 40 l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi 119 (343)
.++..+|+.+.++..++.|..||..+++...... .....+..+.++ ++.|..+.....|
T Consensus 137 ~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~-------------------~h~~~v~~l~~~--~~~l~sg~~dg~i 195 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT-------------------GHTGSVLCLQYD--ERVIITGSSDSTV 195 (435)
T ss_dssp EEEECCSSEEEEEESSSCEEEEESSSCCEEEEEC-------------------CCSSCEEEEECC--SSEEEEEETTSCE
T ss_pred EEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc-------------------CCCCcEEEEEEC--CCEEEEEcCCCeE
Confidence 3555688878888999999999988765443321 112234556663 5667777544449
Q ss_pred EEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE----E
Q 019290 120 MVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT----V 195 (343)
Q Consensus 120 ~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~----~ 195 (343)
..+|.++++........ ...+..+++++ +.++.+.. .+.|..+|..++... .
T Consensus 196 ~vwd~~~~~~~~~~~~h----~~~v~~l~~~~--~~l~s~s~------------------dg~i~vwd~~~~~~~~~~~~ 251 (435)
T 1p22_A 196 RVWDVNTGEMLNTLIHH----CEAVLHLRFNN--GMMVTCSK------------------DRSIAVWDMASPTDITLRRV 251 (435)
T ss_dssp EEEESSSCCEEEEECCC----CSCEEEEECCT--TEEEEEET------------------TSCEEEEECSSSSCCEEEEE
T ss_pred EEEECCCCcEEEEEcCC----CCcEEEEEEcC--CEEEEeeC------------------CCcEEEEeCCCCCCceeeeE
Confidence 99999887654332221 13456666654 45555332 456888887655432 2
Q ss_pred eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcccccc
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNK 275 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~ 275 (343)
+.........+++ +++.++.+ ..++.|..|++..... ...+.........+.. ++++.++...
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~-~~dg~i~vwd~~~~~~---~~~~~~~~~~v~~~~~--~~~~l~~g~~--------- 314 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSA-SGDRTIKVWNTSTCEF---VRTLNGHKRGIACLQY--RDRLVVSGSS--------- 314 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEE-ETTSEEEEEETTTCCE---EEEEECCSSCEEEEEE--ETTEEEEEET---------
T ss_pred ecCCCCcEEEEEe--CCCEEEEE-eCCCeEEEEECCcCcE---EEEEcCCCCcEEEEEe--CCCEEEEEeC---------
Confidence 2222233455555 56655544 5688999999865221 1122111111122333 4555555444
Q ss_pred ccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 276 KTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|..+|. .++.+..+.... ..+..+..+++.|..+ .....|.+++
T Consensus 315 ---------------dg~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~~~~l~sg-~~dg~i~vwd 362 (435)
T 1p22_A 315 ---------------DNTIRLWDIECGACLRVLEGHE----ELVRCIRFDNKRIVSG-AYDGKIKVWD 362 (435)
T ss_dssp ---------------TSCEEEEETTTCCEEEEECCCS----SCEEEEECCSSEEEEE-ETTSCEEEEE
T ss_pred ---------------CCeEEEEECCCCCEEEEEeCCc----CcEEEEEecCCEEEEE-eCCCcEEEEE
Confidence 346777886 466666664322 2344444444444444 4445566554
No 276
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.97 E-value=0.0015 Score=57.37 Aligned_cols=194 Identities=8% Similarity=0.067 Sum_probs=103.2
Q ss_pred CCceEEEcC--CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCC-CeEEE
Q 019290 36 GPESLAFDC--NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVT-CDLYI 112 (343)
Q Consensus 36 ~p~~l~~d~--~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~-~~l~v 112 (343)
...++++.+ +|+.+.++..++.|..||..++.+...... ......+..++++++. +.+++
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-----------------~~h~~~V~~v~~~p~~~g~~la 121 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEH-----------------AGHDSSVNSVCWAPHDYGLILA 121 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEE-----------------CCCSSCCCEEEECCTTTCSCEE
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEc-----------------cCCCCceEEEEECCCCCCcEEE
Confidence 356788865 478788888999999999877543222110 0112345788898742 44444
Q ss_pred EeCCCe-EEEEeCCCCe-EEEcccccCCCCccCcceeEEeCCCC-----------------eEEEEeCCcccccccceee
Q 019290 113 ADAYFG-LMVVGPNGGQ-AQQLASSAGGIPFRFTNDLDIDPNTG-----------------IVYFTDSSIYFQRRQYFMS 173 (343)
Q Consensus 113 ~~~~~g-i~~~d~~~~~-~~~~~~~~~~~~~~~~~~i~~d~~dg-----------------~l~v~~~~~~~~~~~~~~~ 173 (343)
+...++ |..++.+++. ..... .... ....++.+++.+ ++ .++++.
T Consensus 122 sgs~D~~i~lwd~~~~~~~~~~~-~~~~-h~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sg------------- 185 (316)
T 3bg1_A 122 CGSSDGAISLLTYTGEGQWEVKK-INNA-HTIGCNAVSWAP-AVVPGSLIDHPSGQKPNYIKRFASG------------- 185 (316)
T ss_dssp EECSSSCEEEEEECSSSCEEECC-BTTS-SSSCBCCCEECC-CCCC------CCSCCCCCCCBEECC-------------
T ss_pred EEcCCCCEEEEecCCCCCcceee-eecc-ccCCcceEEEcc-ccCCccccccccccCccccceEEEe-------------
Confidence 334444 8888876542 22211 1111 113356666666 22 222221
Q ss_pred eeecCCCceEEEEeCCCC-ceE---EeecCCCCcceeEEecCC---CEEEEEEcCCCeEEEEEccCcccc-ccceeeecC
Q 019290 174 IATGDRSGRLLKYDPLKK-NVT---VMYNGLSFPNGVALSNNN---SFLLLAESATLKILRFWLQGERTT-YTPQLFAEM 245 (343)
Q Consensus 174 ~~~~~~~~~v~~~d~~~~-~~~---~~~~~~~~~~~i~~~~d~---~~lyv~~~~~~~i~~~~~~~~~~~-~~~~~~~~~ 245 (343)
...+.|..+|..++ ... .+.........++++|++ ..++++...++.|..|++...... ...+.+...
T Consensus 186 ----s~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 261 (316)
T 3bg1_A 186 ----GCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF 261 (316)
T ss_dssp ----BTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC
T ss_pred ----cCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC
Confidence 11344555554422 221 222233446788999876 235566667899999997642110 011122222
Q ss_pred CCCCCceeeCCCCCEEEEecc
Q 019290 246 PRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 246 ~~~p~~i~~d~~G~lwi~~~~ 266 (343)
......+++.++|++.++...
T Consensus 262 ~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 262 NDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp SSCEEEEEECTTTCCEEEEES
T ss_pred CCcEEEEEEcCCCCEEEEEcC
Confidence 222345678898877666544
No 277
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.90 E-value=0.014 Score=53.52 Aligned_cols=144 Identities=9% Similarity=0.027 Sum_probs=90.1
Q ss_pred EEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeEE
Q 019290 41 AFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLM 120 (343)
Q Consensus 41 ~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~ 120 (343)
++..+|+.++++..++.|..||..+++..... ......+..+.++ ++.++.+.....|.
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~-------------------~~h~~~v~~~~~~--~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-------------------VGHTGGVWSSQMR--DNIIISGSTDRTLK 182 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEEC-------------------CCCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEEEE-------------------cCCCCCEEEEEec--CCEEEEEeCCCeEE
Confidence 45556887888999999999998876543221 1122345677777 45677775444599
Q ss_pred EEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE-eecC
Q 019290 121 VVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV-MYNG 199 (343)
Q Consensus 121 ~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~~~~ 199 (343)
.+|.++++........ ...+..+++++ +.++.+.. .+.|..+|..+++... +...
T Consensus 183 vwd~~~~~~~~~~~~h----~~~v~~~~~~~--~~l~s~s~------------------dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 183 VWNAETGECIHTLYGH----TSTVRCMHLHE--KRVVSGSR------------------DATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEETTTTEEEEEECCC----SSCEEEEEEET--TEEEEEET------------------TSEEEEEESSSCCEEEEEECC
T ss_pred EEECCcCcEEEEECCC----CCcEEEEEecC--CEEEEEeC------------------CCEEEEEECCCCcEEEEEcCC
Confidence 9999888654332221 13466777765 45555332 4678888887666543 3333
Q ss_pred CCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 200 LSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 200 ~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
......+++ +++.++. ...++.|..|++..
T Consensus 239 ~~~v~~~~~--~~~~l~~-~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 239 VAAVRCVQY--DGRRVVS-GAYDFMVKVWDPET 268 (445)
T ss_dssp SSCEEEEEE--CSSCEEE-EETTSCEEEEEGGG
T ss_pred cccEEEEEE--CCCEEEE-EcCCCEEEEEECCC
Confidence 334455555 5665554 45678999999764
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.88 E-value=0.012 Score=56.57 Aligned_cols=40 Identities=10% Similarity=-0.062 Sum_probs=26.1
Q ss_pred CeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecC
Q 019290 292 PVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSS 333 (343)
Q Consensus 292 ~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~ 333 (343)
+.++.+|. +|+++-.+..+.+.....+.. +.+|++||+..
T Consensus 494 g~l~A~D~~tG~~lW~~~l~~g~~~~P~~y--~~~G~qyv~~~ 534 (599)
T 1w6s_A 494 GYLKARDSDTGDLLWKFKIPSGAIGYPMTY--THKGTQYVAIY 534 (599)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEEE
T ss_pred CeEEEEECCCCCEEEEeeCCCCcEeccEEE--EeCCEEEEEEE
Confidence 57889997 689887777766533323222 34888887643
No 279
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.84 E-value=0.0049 Score=58.53 Aligned_cols=185 Identities=8% Similarity=0.004 Sum_probs=110.5
Q ss_pred CCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 35 VGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 35 ~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
....+++++|+|..+-++..+|.+..||.++ ....+. .. ..-.....+.++++++++.|+++.
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~---------------~~~~~~sv~svafSPDG~~LAsgs 148 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SK---------------GNLSSRTYHCFEWNPIESSIVVGN 148 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CS---------------SCSTTTCEEEEEECSSSSCEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CC---------------CccccccEEEEEEcCCCCEEEEEc
Confidence 3578999999999777889999999998543 111111 00 000112367899999666788875
Q ss_pred CCCeEEEEeCCCCeE--------EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEE
Q 019290 115 AYFGLMVVGPNGGQA--------QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKY 186 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~--------~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (343)
....|..+|.++++. ..+.....+ ....+.++++.| || +..+.. .+.|..+
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~g-h~~~V~sVawSP-dg-Laass~------------------D~tVrlW 207 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESSIRLSDAG-SKDWVTHIVWYE-DV-LVAALS------------------NNSVFSM 207 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEEEECSCTT-CCCCEEEEEEET-TE-EEEEET------------------TCCEEEE
T ss_pred CCCEEEEEECCCCccccccceeeeeeeccccc-ccccEEEEEEcC-Cc-EEEEeC------------------CCeEEEE
Confidence 444588999987742 222111122 235789999999 57 444322 3467778
Q ss_pred eCCCCceE----Eee-cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeee-cCCCCCCceee--CCCC
Q 019290 187 DPLKKNVT----VMY-NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFA-EMPRFPDNIKS--DSKG 258 (343)
Q Consensus 187 d~~~~~~~----~~~-~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~p~~i~~--d~~G 258 (343)
|.+++... .+. ..-.....++++ +..+..+ . .++|..|++.+. ....+. ........+.+ .++|
T Consensus 208 d~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa-~-~~tIkLWd~~~~----~~~~~~~gh~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 208 TVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLT-C-PGYVHKIDLKNY----SISSLKTGSLENFHIIPLNHEKES 279 (588)
T ss_dssp CCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEE-C-SSEEEEEETTTT----EEEEEECSCCSCCCEEEETTCSSC
T ss_pred ECCCCccccceeeecccccCcEEEEEEE--CCEEEEE-e-CCeEEEEECCCC----eEEEEEcCCCceEEEEEeeeCCCC
Confidence 87665531 232 222457888898 4555444 3 589999998763 222222 11222445666 6666
Q ss_pred CEEEEec
Q 019290 259 EFWIAMN 265 (343)
Q Consensus 259 ~lwi~~~ 265 (343)
...+...
T Consensus 280 ~~La~a~ 286 (588)
T 2j04_A 280 TILLMSN 286 (588)
T ss_dssp EEEEECS
T ss_pred CEEEEEc
Confidence 5554444
No 280
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.83 E-value=0.018 Score=52.69 Aligned_cols=225 Identities=12% Similarity=0.052 Sum_probs=123.7
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
..+++++ ++.++++..++.|..||..+++..... .........+.++ ++.+..+...
T Consensus 162 v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~-------------------~~h~~~v~~~~~~--~~~l~s~s~d 218 (445)
T 2ovr_B 162 VWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTL-------------------YGHTSTVRCMHLH--EKRVVSGSRD 218 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEE-------------------CCCSSCEEEEEEE--TTEEEEEETT
T ss_pred EEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEE-------------------CCCCCcEEEEEec--CCEEEEEeCC
Confidence 4566665 566888889999999998876433221 0122235667776 4667777555
Q ss_pred CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEe
Q 019290 117 FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVM 196 (343)
Q Consensus 117 ~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 196 (343)
..|..+|.++++........ ...+..+.++. ..++.+.. .+.|..+|..+++....
T Consensus 219 g~i~~wd~~~~~~~~~~~~~----~~~v~~~~~~~--~~l~~~~~------------------dg~i~iwd~~~~~~~~~ 274 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMGH----VAAVRCVQYDG--RRVVSGAY------------------DFMVKVWDPETETCLHT 274 (445)
T ss_dssp SEEEEEESSSCCEEEEEECC----SSCEEEEEECS--SCEEEEET------------------TSCEEEEEGGGTEEEEE
T ss_pred CEEEEEECCCCcEEEEEcCC----cccEEEEEECC--CEEEEEcC------------------CCEEEEEECCCCcEeEE
Confidence 55999999877654332221 13456666643 45555332 45688888776654332
Q ss_pred ec-CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCcccccc
Q 019290 197 YN-GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNK 275 (343)
Q Consensus 197 ~~-~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~ 275 (343)
.. .......+++ ++..++.+ ..++.|..|++..... ...+........ .+..++++.++...
T Consensus 275 ~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~~~~~---~~~~~~~~~~v~--~~~~~~~~l~~~~~--------- 337 (445)
T 2ovr_B 275 LQGHTNRVYSLQF--DGIHVVSG-SLDTSIRVWDVETGNC---IHTLTGHQSLTS--GMELKDNILVSGNA--------- 337 (445)
T ss_dssp ECCCSSCEEEEEE--CSSEEEEE-ETTSCEEEEETTTCCE---EEEECCCCSCEE--EEEEETTEEEEEET---------
T ss_pred ecCCCCceEEEEE--CCCEEEEE-eCCCeEEEEECCCCCE---EEEEcCCcccEE--EEEEeCCEEEEEeC---------
Confidence 22 2233455555 66665554 5678999999865221 112111111112 23334555555444
Q ss_pred ccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecCCCCeEEEEc
Q 019290 276 KTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|..+|. +++....+..+.. ....+..+..++ ++.+++.....|.+++
T Consensus 338 ---------------dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 338 ---------------DSTVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQFNK-NFVITSSDDGTVKLWD 388 (445)
T ss_dssp ---------------TSCEEEEETTTCCEEEEECSTTS-CSSCEEEEEECS-SEEEEEETTSEEEEEE
T ss_pred ---------------CCeEEEEECCCCcEEEEEccCCC-CCCCEEEEEECC-CEEEEEeCCCeEEEEE
Confidence 346777776 5676666654322 233444444444 3444444445666554
No 281
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.82 E-value=0.0013 Score=64.61 Aligned_cols=158 Identities=10% Similarity=0.104 Sum_probs=89.7
Q ss_pred CceEEEcCCCCeeE-EEecC----CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEE
Q 019290 37 PESLAFDCNGEGPY-VGVSD----GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLY 111 (343)
Q Consensus 37 p~~l~~d~~g~~l~-~~~~~----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~ 111 (343)
..++.++|||+.+. ..... ..|+.+|..+++... . ..... ....++++++++..|+
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~----------------~~~~~--~~~~~~~wspDg~~l~ 183 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-V----------------DVIEG--GKYATPKWTPDSKGFY 183 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-S----------------CCBSC--CTTCCCEECTTSSEEE
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-C----------------cccCc--ccccceEEecCCCEEE
Confidence 45788999999554 33223 479999998875420 0 00000 0114677888455677
Q ss_pred EEeCCCe-------------EEEEeCCCCeE--EEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeee
Q 019290 112 IADAYFG-------------LMVVGPNGGQA--QQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIA 175 (343)
Q Consensus 112 v~~~~~g-------------i~~~d~~~~~~--~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~ 175 (343)
++..... |+++++.+++. +.+...... .....++.+++ ||+ |.++...
T Consensus 184 ~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~--~~~~~~~~~Sp-DG~~l~~~~~~------------- 247 (695)
T 2bkl_A 184 YEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD--PTTFLQSDLSR-DGKYLFVYILR------------- 247 (695)
T ss_dssp EEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC--TTCEEEEEECT-TSCCEEEEEEE-------------
T ss_pred EEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC--CEEEEEEEECC-CCCEEEEEEeC-------------
Confidence 6644222 99999887652 222221111 12355778888 576 4443211
Q ss_pred ecCCCceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEc---CCCeEEEEEccC
Q 019290 176 TGDRSGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAES---ATLKILRFWLQG 232 (343)
Q Consensus 176 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~---~~~~i~~~~~~~ 232 (343)
......|+.++..+++.+.+............ ++++ +|+... ...+|+++++++
T Consensus 248 -~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~ 304 (695)
T 2bkl_A 248 -GWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAK 304 (695)
T ss_dssp -TTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTB
T ss_pred -CCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCC
Confidence 00134688888766676666544433344433 6777 777654 358899999865
No 282
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.82 E-value=0.002 Score=63.67 Aligned_cols=142 Identities=15% Similarity=0.042 Sum_probs=87.7
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
-.++.+.++|..++.+ ++.|+.||..+++...+....... .......+..+++++..|.++...
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~Spdg~~l~~~~~~ 82 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFD--------------EFGHSINDYSISPDGQFILLEYNY 82 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTT--------------TCCSCCCEEEECTTSSEEEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhh--------------hhcccccceEECCCCCEEEEEECC
Confidence 4588999999866654 889999999887765543211100 001112357788855566666421
Q ss_pred ---------CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEE
Q 019290 117 ---------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKY 186 (343)
Q Consensus 117 ---------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (343)
..++.+|.++++.+.+.... ......++.| ||+ |.++. .+.|+.+
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~~~l~~~~-----~~~~~~~~SP-dG~~la~~~-------------------~~~i~~~ 137 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQLITEERIP-----NNTQWVTWSP-VGHKLAYVW-------------------NNDIYVK 137 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCCC-----TTEEEEEECS-STTCEEEEE-------------------TTEEEEE
T ss_pred eeeEEEccceEEEEEECCCCcEEEcccCC-----CcceeeEECC-CCCEEEEEE-------------------CCeEEEE
Confidence 23779999999876543211 2356778888 565 44432 2468888
Q ss_pred eCCCCceEEeecCC-------------------CCcceeEEecCCCEEEEEE
Q 019290 187 DPLKKNVTVMYNGL-------------------SFPNGVALSNNNSFLLLAE 219 (343)
Q Consensus 187 d~~~~~~~~~~~~~-------------------~~~~~i~~~~d~~~lyv~~ 219 (343)
+..+++...+..+. ....+++++|||+.|.+..
T Consensus 138 ~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred ECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 87777665543221 1224588999999876653
No 283
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.81 E-value=0.026 Score=53.99 Aligned_cols=70 Identities=7% Similarity=-0.015 Sum_probs=40.9
Q ss_pred CCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC------Ce
Q 019290 46 GEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY------FG 118 (343)
Q Consensus 46 g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~------~g 118 (343)
+..+|+...++.|+.+|..+++.. .+.. .... ..... .....+. ++.+|++... ..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~-~~~~------------~~~~~--~~~P~v~--~g~v~vg~~~~~~~~~g~ 177 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEV-CDPK------------VGSTL--TQAPFVA--KDTVLMGCSGAELGVRGA 177 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC-CCGG------------GTCBC--CSCCEEE--TTEEEEECBCGGGTCCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecC-CCCC------------cccee--ccCCEEE--CCEEEEEecCCccCCCCE
Confidence 344888888999999999887543 1111 0000 00000 0111233 5789998542 34
Q ss_pred EEEEeCCCCeEEEc
Q 019290 119 LMVVGPNGGQAQQL 132 (343)
Q Consensus 119 i~~~d~~~~~~~~~ 132 (343)
|+.+|.++|+...-
T Consensus 178 v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 178 VNAFDLKTGELKWR 191 (571)
T ss_dssp EEEEETTTCCEEEE
T ss_pred EEEEECCCCcEEEE
Confidence 99999999987653
No 284
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.77 E-value=0.015 Score=50.08 Aligned_cols=235 Identities=11% Similarity=-0.007 Sum_probs=123.8
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.++|+.+.++..++.|..|+.++++...... ........+..+ ...+..+..
T Consensus 69 ~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~-------------------~h~~~~~~~~~~--~~~l~s~~~ 127 (318)
T 4ggc_A 69 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT-------------------SHSARVGSLSWN--SYILSSGSR 127 (318)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------------------CCSSCEEEEEEE--TTEEEEEET
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec-------------------CccceEEEeecC--CCEEEEEec
Confidence 35789999999988889999999999998765433211 111122333333 345555543
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE-
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT- 194 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 194 (343)
...+..++..++......... ....+..++..+ ++.+.++... .+.|..+|..+++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~ 186 (318)
T 4ggc_A 128 SGHIHHHDVRVAEHHVATLSG---HSQEVCGLRWAP-DGRHLASGGN-----------------DNLVNVWPSAPGEGGW 186 (318)
T ss_dssp TSEEEEEETTSSSCEEEEEEC---CSSCEEEEEECT-TSSEEEEEET-----------------TSCEEEEESSCBTTBS
T ss_pred CCceEeeecCCCceeEEEEcC---ccCceEEEEEcC-CCCEEEEEec-----------------CcceeEEECCCCcccc
Confidence 333556665544322111111 113456677777 4766654432 456777787654421
Q ss_pred ----EeecCCCCcceeEEecCCCEEEE--EEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEeccCC
Q 019290 195 ----VMYNGLSFPNGVALSNNNSFLLL--AESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSAR 268 (343)
Q Consensus 195 ----~~~~~~~~~~~i~~~~d~~~lyv--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~ 268 (343)
...........+++.+++..+.. +....+.|..|+...... ............++..++++..++.....
T Consensus 187 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~sg~~ 262 (318)
T 4ggc_A 187 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC----LSAVDAHSQVCSILWSPHYKELISGHGFA 262 (318)
T ss_dssp CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE----EEEEECSSCEEEEEEETTTTEEEEEECTT
T ss_pred cceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc----cccccceeeeeeeeecccccceEEEEEcC
Confidence 11112233456677776654443 344567788888654221 11111122133455666665444332201
Q ss_pred CccccccccccccccCCCcccCCCeEEEECC-CCCEEEEeeCCCCCccCCceeEEEe-CCEEEEecCCCCeEEEEc
Q 019290 269 GKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEY-GEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~-~g~l~i~~~~~~~i~~~~ 342 (343)
.+.|..+|. +++.+..+... ...+..+... +|++.++...-..|.+.+
T Consensus 263 ----------------------d~~i~iwd~~~~~~~~~l~gH----~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 263 ----------------------QNQLVIWKYPTMAKVAELKGH----TSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp ----------------------TCCEEEEETTTCCEEEEECCC----SSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred ----------------------CCEEEEEECCCCcEEEEEcCC----CCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 236667775 57777666532 2345555544 566555555555565543
No 285
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.77 E-value=0.0066 Score=59.54 Aligned_cols=210 Identities=10% Similarity=0.043 Sum_probs=109.9
Q ss_pred CceEEEcCCCCee-EEEecC----CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEE
Q 019290 37 PESLAFDCNGEGP-YVGVSD----GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLY 111 (343)
Q Consensus 37 p~~l~~d~~g~~l-~~~~~~----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~ 111 (343)
..++.+++||+.+ |+.... ..|+.+|..+++....... .. ...++++. +++.|+
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~------------------~~--k~~~~~Ws-Dg~~l~ 189 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK------------------DV--KFSGISWL-GNEGFF 189 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE------------------EE--ESCCCEEE-TTTEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC------------------Cc--eeccEEEe-CCCEEE
Confidence 4567899999944 333322 3688899988775432110 00 01234566 466777
Q ss_pred EEeCC-------------CeEEEEeCCCCeE--EEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeee
Q 019290 112 IADAY-------------FGLMVVGPNGGQA--QQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIA 175 (343)
Q Consensus 112 v~~~~-------------~gi~~~d~~~~~~--~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~ 175 (343)
++... ..|+++++.+++. +.+....... .....++.+++ ||+ |+++...
T Consensus 190 y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~-~~~~~~~~~Sp-Dg~~l~~~~~~------------- 254 (693)
T 3iuj_A 190 YSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ-HHRYVGATVTE-DDRFLLISAAN------------- 254 (693)
T ss_dssp EEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG-CCSEEEEEECT-TSCEEEEEEES-------------
T ss_pred EEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC-CeEEEEEEEcC-CCCEEEEEEcc-------------
Confidence 76433 2288888765532 2222211100 12345677888 576 4443322
Q ss_pred ecCCCceEEEEeCCCC--ceEEeecCCCCcceeEEecCCCEEEEEEcC---CCeEEEEEccCccccccceeeecCCCCCC
Q 019290 176 TGDRSGRLLKYDPLKK--NVTVMYNGLSFPNGVALSNNNSFLLLAESA---TLKILRFWLQGERTTYTPQLFAEMPRFPD 250 (343)
Q Consensus 176 ~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~p~ 250 (343)
......|+.+|.+++ ..+.+......... .++++++.+|+.... ..+|+++++++... .+.+.+.... .+
T Consensus 255 -~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~--~~ 329 (693)
T 3iuj_A 255 -STSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP-AHWRDLIPER--QQ 329 (693)
T ss_dssp -SSSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCC--SS
T ss_pred -CCCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc-cccEEEecCC--CC
Confidence 111347999987655 45555443322222 266778888886543 37899999876332 2233333211 11
Q ss_pred ceeeCCCCC-EEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeC
Q 019290 251 NIKSDSKGE-FWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDG 309 (343)
Q Consensus 251 ~i~~d~~G~-lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~ 309 (343)
.+.++++|+ |.++... .. ...|+.++.+|+....+..
T Consensus 330 ~~~~s~~g~~lv~~~~~-~g---------------------~~~l~~~d~~g~~~~~l~~ 367 (693)
T 3iuj_A 330 VLTVHSGSGYLFAEYMV-DA---------------------TARVEQFDYEGKRVREVAL 367 (693)
T ss_dssp CEEEEEETTEEEEEEEE-TT---------------------EEEEEEECTTSCEEEEECC
T ss_pred EEEEEEECCEEEEEEEE-CC---------------------eeEEEEEECCCCeeEEeec
Confidence 224455554 4444333 11 1256777777766555543
No 286
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.77 E-value=0.017 Score=50.47 Aligned_cols=215 Identities=8% Similarity=-0.002 Sum_probs=109.5
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC------------CeEEEEe
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY------------FGLMVVG 123 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~------------~gi~~~d 123 (343)
..++.||+.+++|.....+. +....-++++.. ++.||+.... +.++++|
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~-----------------p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~d 73 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSS-----------------QVPKNHVSLVTK--ENQVFVAGGLFYNEDNKEDPMSAYFLQFD 73 (315)
T ss_dssp TEEEEEETTTTEEEEEECCC-----------------CSCSSEEEEECT--TCCEEEEEEEEECSSCSSSCEEEEEEEEE
T ss_pred CceEEECCCCCeEecCCCCC-----------------CCCccceEEEEE--CCEEEEEcCcccCCCCCccccccceEEec
Confidence 67999999998887521100 001112333333 5677765321 1288999
Q ss_pred CCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC-
Q 019290 124 PNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF- 202 (343)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~- 202 (343)
+.+.+++.+...... ..-+.++... +.+|+.-..... ........+++||+.+++.+.+......
T Consensus 74 ~~~~~W~~~~~~p~~---r~~~~~~~~~--~~lyv~GG~~~~---------~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 139 (315)
T 4asc_A 74 HLDSEWLGMPPLPSP---RCLFGLGEAL--NSIYVVGGREIK---------DGERCLDSVMCYDRLSFKWGESDPLPYVV 139 (315)
T ss_dssp TTTTEEEECCCBSSC---EESCEEEEET--TEEEEECCEESS---------TTCCBCCCEEEEETTTTEEEECCCCSSCC
T ss_pred CCCCeEEECCCCCcc---hhceeEEEEC--CEEEEEeCCcCC---------CCCcccceEEEECCCCCcEeECCCCCCcc
Confidence 999998877543322 1223444443 788884321000 0011135699999998887765432111
Q ss_pred -cceeEEecCCCEEEEEEcC------CCeEEEEEccCccccccceeeecCCCCCCc--eeeCCCCCEEEEeccCCCcccc
Q 019290 203 -PNGVALSNNNSFLLLAESA------TLKILRFWLQGERTTYTPQLFAEMPRFPDN--IKSDSKGEFWIAMNSARGKIES 273 (343)
Q Consensus 203 -~~~i~~~~d~~~lyv~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~--i~~d~~G~lwi~~~~~~~~~~~ 273 (343)
....+. -+ +.+|+..-. .+.+++||+..+ +...+...+. |.. -+.--+++||+.........
T Consensus 140 ~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~-- 210 (315)
T 4asc_A 140 YGHTVLS-HM-DLVYVIGGKGSDRKCLNKMCVYDPKKF----EWKELAPMQT-ARSLFGATVHDGRIIVAAGVTDTGL-- 210 (315)
T ss_dssp BSCEEEE-ET-TEEEEECCBCTTSCBCCCEEEEETTTT----EEEECCCCSS-CCBSCEEEEETTEEEEEEEECSSSE--
T ss_pred cceeEEE-EC-CEEEEEeCCCCCCcccceEEEEeCCCC----eEEECCCCCC-chhceEEEEECCEEEEEeccCCCCc--
Confidence 122233 23 457776422 256899987652 2222222221 111 12222677888654312111
Q ss_pred ccccccccccCCCcccCCCeEEEECCCCCEEEEee-CCCCCccCCceeEEEeCCEEEEec
Q 019290 274 NKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD-GNEGNTLNSVSEVQEYGEYLYTGS 332 (343)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~i~~ 332 (343)
...+.+||++...-..+. .|.. .....+...+++||+-+
T Consensus 211 -----------------~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~~~~l~v~G 250 (315)
T 4asc_A 211 -----------------TSSAEVYSITDNKWAPFEAFPQE---RSSLSLVSLVGTLYAIG 250 (315)
T ss_dssp -----------------EEEEEEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEEE
T ss_pred -----------------cceEEEEECCCCeEEECCCCCCc---ccceeEEEECCEEEEEC
Confidence 237889998655443333 2222 12223344488888654
No 287
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.0029 Score=64.16 Aligned_cols=157 Identities=8% Similarity=-0.046 Sum_probs=101.4
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...++++.+ |+.+.++..++.|..||..+++...-.. ....+..+++++++..|+++..
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~--------------------~~~~V~~v~~sp~g~~l~sgs~ 118 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF--------------------VPGKITSIDTDASLDWMLIGLQ 118 (902)
T ss_dssp CEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE--------------------CSSCEEEEECCTTCSEEEEEET
T ss_pred CEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc--------------------CCCCEEEEEECCCCCEEEEEcC
Confidence 467899999 7877788899999999998765332110 1124678889985566777754
Q ss_pred CCeEEEEeCCCCeEEEccc-------ccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 116 YFGLMVVGPNGGQAQQLAS-------SAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~-------~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
...|..+|.++++...+.. .........+.++++.|.++.+.++... .+.| .||.
T Consensus 119 dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~-----------------dg~v-lWd~ 180 (902)
T 2oaj_A 119 NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE-----------------YVTL-TYSL 180 (902)
T ss_dssp TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS-----------------SCEE-EEET
T ss_pred CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC-----------------CCcE-EEEC
Confidence 4449999999887542210 0011122458899999942344443322 4567 8888
Q ss_pred CCCceEEeecC-------------------CCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 189 LKKNVTVMYNG-------------------LSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 189 ~~~~~~~~~~~-------------------~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.+++....... ......++++|++..+ ++...++.|..|++..
T Consensus 181 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~l-asgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 181 VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHI-ITIHEDNSLVFWDANS 242 (902)
T ss_dssp TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEE-EEEETTCCEEEEETTT
T ss_pred CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEE-EEEECCCeEEEEECCC
Confidence 76664332221 1336789999998855 4555688999999864
No 288
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.76 E-value=0.023 Score=55.71 Aligned_cols=157 Identities=13% Similarity=0.045 Sum_probs=87.3
Q ss_pred CceEEEcCCCCeeEEEecCC----------------EEEEEEcCCCCeE--EeeecCCCccccccCCCCCcccCCCcCCe
Q 019290 37 PESLAFDCNGEGPYVGVSDG----------------RILKWKAANSGWT--EFATTAPHRAREICDGSTNTTLEPLCGRP 98 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g----------------~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 98 (343)
..++++.+||+.+++...++ .|++++..++... .+... .......
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~-----------------~~~~~~~ 235 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF-----------------PDEPKWM 235 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC-----------------TTCTTCE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc-----------------CCCCeEE
Confidence 46799999998676654433 3888887665421 11100 0111224
Q ss_pred eeEEEeCCCCeEEEEeC-----CCeEEEEeCCC------C--eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCccc
Q 019290 99 LGIKFNPVTCDLYIADA-----YFGLMVVGPNG------G--QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYF 165 (343)
Q Consensus 99 ~gi~~~~~~~~l~v~~~-----~~gi~~~d~~~------~--~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~ 165 (343)
.++.++++++.|+++.. ...|+.+|.++ + ..+.+..... .... .+++.++.+|+....
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-----~~~~-~~s~dg~~l~~~s~~--- 306 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-----GEYD-YVTNEGTVFTFKTNR--- 306 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-----SCEE-EEEEETTEEEEEECT---
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-----cEEE-EEeccCCEEEEEECC---
Confidence 57888885556666542 34589999876 4 3444432111 1111 244423567776542
Q ss_pred ccccceeeeeecCCCceEEEEeCCCCc---eEEeecCCC--CcceeEEecCCCEEEEEEcCCC--eEEEEEcc
Q 019290 166 QRRQYFMSIATGDRSGRLLKYDPLKKN---VTVMYNGLS--FPNGVALSNNNSFLLLAESATL--KILRFWLQ 231 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~~~~--~~~~i~~~~d~~~lyv~~~~~~--~i~~~~~~ 231 (343)
......|+.+|.+++. .+.+..... ...++++.+ ++.++++...++ +|+++++.
T Consensus 307 -----------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~ 367 (710)
T 2xdw_A 307 -----------HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLA 367 (710)
T ss_dssp -----------TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETT
T ss_pred -----------CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECC
Confidence 1124579999987663 344444332 345677764 455666654443 67888873
No 289
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.76 E-value=0.01 Score=54.10 Aligned_cols=192 Identities=9% Similarity=-0.044 Sum_probs=108.8
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCe
Q 019290 39 SLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFG 118 (343)
Q Consensus 39 ~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~g 118 (343)
..++..++..+.++..++.+..+|........... ........++.+.+.+..+..+.....
T Consensus 192 v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~------------------~~h~~~~~~~~~~~~g~~l~s~~~D~~ 253 (420)
T 4gga_A 192 VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATL------------------SGHSQEVCGLRWAPDGRHLASGGNDNL 253 (420)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE------------------ECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEeeCCCEEEEEeCCCceeEeeecccceeeEEe------------------cccccceeeeeecCCCCeeeeeecccc
Confidence 34445566767777788888888876533221110 112234567888874444555543344
Q ss_pred EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeec
Q 019290 119 LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYN 198 (343)
Q Consensus 119 i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 198 (343)
+..++..+++...............+..+++.+.+..+.++..+ ...+.|..||..+++......
T Consensus 254 v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g---------------s~D~~I~iwd~~t~~~~~~~~ 318 (420)
T 4gga_A 254 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG---------------TSDRHIRIWNVCSGACLSAVD 318 (420)
T ss_dssp EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEEC---------------TTTCEEEEEETTTTEEEEEEE
T ss_pred ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEee---------------cCCCEEEEEeCCccccceeec
Confidence 88888776542211100001112346677777743445443211 124568888988887655454
Q ss_pred CCCCcceeEEecCCCEEEEEE-cCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 199 GLSFPNGVALSNNNSFLLLAE-SATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 199 ~~~~~~~i~~~~d~~~lyv~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
.......+++.++++.++.+. ..++.|..|++..... ...+..-.+....++++++|++.++...
T Consensus 319 ~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~---v~~l~gH~~~V~~l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 319 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK---VAELKGHTSRVLSLTMSPDGATVASAAA 384 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE---EEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE---EEEEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 555677888899998877654 3568999999764211 1122111122345678999987776554
No 290
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.76 E-value=0.037 Score=54.12 Aligned_cols=173 Identities=12% Similarity=-0.019 Sum_probs=86.7
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCe-eeEEEeCCCCeEEEEeCC
Q 019290 39 SLAFDCNGEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRP-LGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 39 ~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~gi~~~~~~~~l~v~~~~ 116 (343)
+++++ +..+|+.+.+++|+.+|..+++.. .+...... ...... ....+. ++.+|++...
T Consensus 123 ~~a~~--~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~---------------~~~~~~~~~p~v~--~~~v~v~~~~ 183 (677)
T 1kb0_A 123 GVALW--KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQ---------------KGSLTITGAPRVF--KGKVIIGNGG 183 (677)
T ss_dssp CCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEETTTTC---------------CSSCBCCSCCEEE--TTEEEECCBC
T ss_pred CceEE--CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCc---------------CcCcccccCcEEE--CCEEEEEecc
Confidence 44442 445888888999999999887643 22110000 000000 112233 5788887532
Q ss_pred ------CeEEEEeCCCCeEEEcccccCCC----------------------------CccCcceeEEeCCCCeEEEEeCC
Q 019290 117 ------FGLMVVGPNGGQAQQLASSAGGI----------------------------PFRFTNDLDIDPNTGIVYFTDSS 162 (343)
Q Consensus 117 ------~gi~~~d~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~d~~dg~l~v~~~~ 162 (343)
..|+.+|.++|+...-....... .......+++|+..+.+|++...
T Consensus 184 ~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~ 263 (677)
T 1kb0_A 184 AEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGN 263 (677)
T ss_dssp TTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCC
T ss_pred cccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCC
Confidence 34999999999876533221110 00112357888855788887643
Q ss_pred cccccccceeee---eecCCCceEEEEeCCCCceEEeecC----------CCCcceeEEecCCC--EEEEEEcCCCeEEE
Q 019290 163 IYFQRRQYFMSI---ATGDRSGRLLKYDPLKKNVTVMYNG----------LSFPNGVALSNNNS--FLLLAESATLKILR 227 (343)
Q Consensus 163 ~~~~~~~~~~~~---~~~~~~~~v~~~d~~~~~~~~~~~~----------~~~~~~i~~~~d~~--~lyv~~~~~~~i~~ 227 (343)
... +.....- ....-.+.|+.+|.++|+..-..+. ...|.-.....+|+ .+++..+.++.|+.
T Consensus 264 ~~~--w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~ 341 (677)
T 1kb0_A 264 GSP--WSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFV 341 (677)
T ss_dssp EES--SCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEE
T ss_pred Ccc--ccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEE
Confidence 110 0000000 0000023599999988886532211 11222222223552 23334445677877
Q ss_pred EEccC
Q 019290 228 FWLQG 232 (343)
Q Consensus 228 ~~~~~ 232 (343)
+|..+
T Consensus 342 lD~~t 346 (677)
T 1kb0_A 342 LDRTN 346 (677)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 77654
No 291
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.76 E-value=0.017 Score=50.18 Aligned_cols=224 Identities=10% Similarity=-0.012 Sum_probs=118.6
Q ss_pred CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC-----CCeEEEEeCCCCeE
Q 019290 55 DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA-----YFGLMVVGPNGGQA 129 (343)
Q Consensus 55 ~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~-----~~gi~~~d~~~~~~ 129 (343)
...+++||+.+.+|..+...+ ....-+.++.. ++.||+... .+.++++|+.+.++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p------------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W 82 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPF------------------EKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSW 82 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCS------------------CCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEE
T ss_pred CceEEEecCCCCCEecCCCCC------------------cccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeE
Confidence 456999999999888764211 11112344444 567887632 14589999999988
Q ss_pred EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC--cceeE
Q 019290 130 QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF--PNGVA 207 (343)
Q Consensus 130 ~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~i~ 207 (343)
+.+...... ..-+.++.. ++.||+.-.... .......+++||+.+.+.+.+...... ....+
T Consensus 83 ~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~-----------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 146 (306)
T 3ii7_A 83 YSKLGPPTP---RDSLAACAA--EGKIYTSGGSEV-----------GNSALYLFECYDTRTESWHTKPSMLTQRCSHGMV 146 (306)
T ss_dssp EEEECCSSC---CBSCEEEEE--TTEEEEECCBBT-----------TBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred EECCCCCcc---ccceeEEEE--CCEEEEECCCCC-----------CCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEE
Confidence 877543322 122333333 378888432100 011135699999998887765322111 12222
Q ss_pred EecCCCEEEEEEcC---------CCeEEEEEccCccccccceeeecCCC--CCCceeeCCCCCEEEEeccCCCccccccc
Q 019290 208 LSNNNSFLLLAESA---------TLKILRFWLQGERTTYTPQLFAEMPR--FPDNIKSDSKGEFWIAMNSARGKIESNKK 276 (343)
Q Consensus 208 ~~~d~~~lyv~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~--~p~~i~~d~~G~lwi~~~~~~~~~~~~~~ 276 (343)
.. + +.+|+..-. ...+++||+..+ ....+...+. .-..++.- +++||+.........
T Consensus 147 ~~-~-~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~----~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~----- 214 (306)
T 3ii7_A 147 EA-N-GLIYVCGGSLGNNVSGRVLNSCEVYDPATE----TWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGG----- 214 (306)
T ss_dssp EE-T-TEEEEECCEESCTTTCEECCCEEEEETTTT----EEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEE-----
T ss_pred EE-C-CEEEEECCCCCCCCcccccceEEEeCCCCC----eEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCC-----
Confidence 32 3 457776421 356889987652 2233322221 11122222 677888743211111
Q ss_pred cccccccCCCcccCCCeEEEECCCCCEEEEee-CCCCCccCCceeEEEeCCEEEEecC-----CCCeEEEEcC
Q 019290 277 TAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD-GNEGNTLNSVSEVQEYGEYLYTGSS-----VQPYVVVIKA 343 (343)
Q Consensus 277 ~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~i~~~-----~~~~i~~~~~ 343 (343)
...+.+||+..+.-..+. .|.. .....+...+++||+-+- ..+.+.+|++
T Consensus 215 --------------~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 215 --------------LDNVEYYDIKLNEWKMVSPMPWK---GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp --------------BCCEEEEETTTTEEEECCCCSCC---BSCCEEEEETTEEEEEECBCSSSBCCEEEEEET
T ss_pred --------------CceEEEeeCCCCcEEECCCCCCC---ccceeEEEECCEEEEEeCcCCCeeeeeEEEEcC
Confidence 247889998765444432 2221 122233334888886554 3456777764
No 292
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.73 E-value=0.0028 Score=55.95 Aligned_cols=117 Identities=9% Similarity=0.067 Sum_probs=74.7
Q ss_pred eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEe
Q 019290 118 GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVM 196 (343)
Q Consensus 118 gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 196 (343)
.|+.+|.++++.+.+ ..+..+++.| ||+ |+++.... +.....|+.++.++++...+
T Consensus 44 ~l~~~d~~~~~~~~l---------~~~~~~~~Sp-Dg~~la~~~~~~-------------~~~~~~l~~~~~~~g~~~~l 100 (347)
T 2gop_A 44 TIVIENLKNNARRFI---------ENATMPRISP-DGKKIAFMRANE-------------EKKVSEIWVADLETLSSKKI 100 (347)
T ss_dssp EEEEEETTTCCEEEE---------ESCEEEEECT-TSSEEEEEEEET-------------TTTEEEEEEEETTTTEEEEE
T ss_pred eEEEEeCCCCceEEc---------ccCCCeEECC-CCCEEEEEEecc-------------CCCcceEEEEECCCCceEEE
Confidence 488999988876655 2356788998 575 54432110 01134599999888877655
Q ss_pred ecCCCCcceeEEecCCCEEEEEEcC--------------------------CCeEEEEEccCccccccc-eeeecCCCCC
Q 019290 197 YNGLSFPNGVALSNNNSFLLLAESA--------------------------TLKILRFWLQGERTTYTP-QLFAEMPRFP 249 (343)
Q Consensus 197 ~~~~~~~~~i~~~~d~~~lyv~~~~--------------------------~~~i~~~~~~~~~~~~~~-~~~~~~~~~p 249 (343)
..... ...++++||++.|+++... ...|+++++.+ ++. +.+.. + ..
T Consensus 101 ~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~----~~~~~~l~~-~-~~ 173 (347)
T 2gop_A 101 LEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES----EEVIEEFEK-P-RF 173 (347)
T ss_dssp EEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT----TEEEEEEEE-E-TT
T ss_pred EcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC----CeEEeeecC-C-Cc
Confidence 43333 6788999999988877532 35788998865 332 33332 2 35
Q ss_pred CceeeCCCCCEEEEec
Q 019290 250 DNIKSDSKGEFWIAMN 265 (343)
Q Consensus 250 ~~i~~d~~G~lwi~~~ 265 (343)
..+..+++| +.++..
T Consensus 174 ~~~~~spdg-~~~~~~ 188 (347)
T 2gop_A 174 SSGIWHRDK-IVVNVP 188 (347)
T ss_dssp CEEEEETTE-EEEEEE
T ss_pred ccccCCCCe-EEEEEe
Confidence 567788889 666553
No 293
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.70 E-value=0.025 Score=51.74 Aligned_cols=149 Identities=11% Similarity=0.090 Sum_probs=88.0
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
..++++ +++.++++..+|.|..||..+++...... .....+..+.++ ++.++.+...
T Consensus 176 v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-------------------~h~~~v~~l~~~--~~~l~s~s~d 232 (435)
T 1p22_A 176 VLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI-------------------HHCEAVLHLRFN--NGMMVTCSKD 232 (435)
T ss_dssp EEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC-------------------CCCSCEEEEECC--TTEEEEEETT
T ss_pred EEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEc-------------------CCCCcEEEEEEc--CCEEEEeeCC
Confidence 445555 77878888999999999988765432211 112235566665 4577777544
Q ss_pred CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE-
Q 019290 117 FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV- 195 (343)
Q Consensus 117 ~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~- 195 (343)
..|..+|.++++.........+ ....+..+.++. ..++.+.. .+.|..+|..+++...
T Consensus 233 g~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~l~s~~~------------------dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 233 RSIAVWDMASPTDITLRRVLVG-HRAAVNVVDFDD--KYIVSASG------------------DRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp SCEEEEECSSSSCCEEEEEECC-CSSCEEEEEEET--TEEEEEET------------------TSEEEEEETTTCCEEEE
T ss_pred CcEEEEeCCCCCCceeeeEecC-CCCcEEEEEeCC--CEEEEEeC------------------CCeEEEEECCcCcEEEE
Confidence 4588999876643211111111 113456677754 45555432 4578888987766543
Q ss_pred eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
+.........+++ +++.+ ++...++.|..|++..
T Consensus 292 ~~~~~~~v~~~~~--~~~~l-~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 292 LNGHKRGIACLQY--RDRLV-VSGSSDNTIRLWDIEC 325 (435)
T ss_dssp EECCSSCEEEEEE--ETTEE-EEEETTSCEEEEETTT
T ss_pred EcCCCCcEEEEEe--CCCEE-EEEeCCCeEEEEECCC
Confidence 2222333455555 45544 4555688999999865
No 294
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.69 E-value=0.0024 Score=63.13 Aligned_cols=158 Identities=14% Similarity=0.017 Sum_probs=89.8
Q ss_pred CceEEEcCCCCeeEEE-ecCC----EEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEE
Q 019290 37 PESLAFDCNGEGPYVG-VSDG----RILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLY 111 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~-~~~g----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~ 111 (343)
..++.++|||+.+.+. ..+| .|+.+|..+++....... .....+++++++ +.|+
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~--------------------~~~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK--------------------WVKFSGLAWLGN-DALL 223 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE--------------------EEESCCCEESTT-SEEE
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC--------------------CceeccEEEECC-CEEE
Confidence 4578899999955433 3323 599999988775432110 000135667775 7777
Q ss_pred EEeCC--------------CeEEEEeCCCCeE--EEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeee
Q 019290 112 IADAY--------------FGLMVVGPNGGQA--QQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSI 174 (343)
Q Consensus 112 v~~~~--------------~gi~~~d~~~~~~--~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~ 174 (343)
++... ..|++++..+++. +.+...... .....++.+++ ||+ |.++....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~--~~~~~~~~~Sp-DG~~l~~~~~~~----------- 289 (741)
T 1yr2_A 224 YSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL--PKRGHGASVSS-DGRWVVITSSEG----------- 289 (741)
T ss_dssp EEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC--TTCEEEEEECT-TSCEEEEEEECT-----------
T ss_pred EEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC--CeEEEEEEECC-CCCEEEEEEEcc-----------
Confidence 76432 1388888876542 122111111 12356778888 575 44432210
Q ss_pred eecCCCceEEEEeCCCC--c-eEEeecCCCCcceeEEecCCCEEEEEEcC---CCeEEEEEccC
Q 019290 175 ATGDRSGRLLKYDPLKK--N-VTVMYNGLSFPNGVALSNNNSFLLLAESA---TLKILRFWLQG 232 (343)
Q Consensus 175 ~~~~~~~~v~~~d~~~~--~-~~~~~~~~~~~~~i~~~~d~~~lyv~~~~---~~~i~~~~~~~ 232 (343)
......|+.+|.+++ + .+.+.......... ++++++.+|+.... ..+|+++++++
T Consensus 290 --~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 290 --TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp --TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred --CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 001346888888766 5 55555433333333 45788888887543 46799999865
No 295
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.69 E-value=0.022 Score=49.61 Aligned_cols=223 Identities=13% Similarity=0.060 Sum_probs=117.4
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC----------CeEEEEeCC
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY----------FGLMVVGPN 125 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~----------~gi~~~d~~ 125 (343)
..++.||+.+.+|..+...+ ....-++++.. ++.||+.... +.++++|+.
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p------------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQ------------------VPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCEEEEETTTTEEEECCCCS------------------SCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred ceEEEEcCCCCeEeECCCCC------------------cccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 36899999998888763211 11112344444 5678876321 248999999
Q ss_pred CCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC--c
Q 019290 126 GGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF--P 203 (343)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~ 203 (343)
+.+++.+...... ..-..++.- ++.||+.-.... ......+++||+.+.+.+.+...... .
T Consensus 99 ~~~W~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 161 (308)
T 1zgk_A 99 TNQWSPCAPMSVP---RNRIGVGVI--DGHIYAVGGSHG------------CIHHNSVERYEPERDEWHLVAPMLTRRIG 161 (308)
T ss_dssp TTEEEECCCCSSC---CBTCEEEEE--TTEEEEECCEET------------TEECCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred CCeEeECCCCCcC---ccccEEEEE--CCEEEEEcCCCC------------CcccccEEEECCCCCeEeECCCCCccccc
Confidence 9998887543322 122333433 378888432100 00134699999998887765422111 1
Q ss_pred ceeEEecCCCEEEEEEcC-----CCeEEEEEccCccccccceeeecCCC--CCCceeeCCCCCEEEEeccCCCccccccc
Q 019290 204 NGVALSNNNSFLLLAESA-----TLKILRFWLQGERTTYTPQLFAEMPR--FPDNIKSDSKGEFWIAMNSARGKIESNKK 276 (343)
Q Consensus 204 ~~i~~~~d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~--~p~~i~~d~~G~lwi~~~~~~~~~~~~~~ 276 (343)
...++. ++.+|+..-. .+.+++|++..+ +...+...+. .-..++.. +++||+.........
T Consensus 162 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~----~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~----- 229 (308)
T 1zgk_A 162 VGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN----EWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQ----- 229 (308)
T ss_dssp CEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT----EEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSB-----
T ss_pred eEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC----eEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCc-----
Confidence 223332 3467776321 356899997652 2222222221 11122332 677888754311111
Q ss_pred cccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEEEeCCEEEEecC-----CCCeEEEEcC
Q 019290 277 TAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSS-----VQPYVVVIKA 343 (343)
Q Consensus 277 ~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~-----~~~~i~~~~~ 343 (343)
...+.+||++...-..+..... ......+...+++||+-+- ..+.+.+|++
T Consensus 230 --------------~~~v~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 230 --------------LNSVERYDVETETWTFVAPMKH--RRSALGITVHQGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp --------------CCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEET
T ss_pred --------------cceEEEEeCCCCcEEECCCCCC--CccceEEEEECCEEEEEcCcCCCcccceEEEEcC
Confidence 2478899987655444432111 1122233334888886543 2456777764
No 296
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.69 E-value=0.014 Score=56.80 Aligned_cols=115 Identities=10% Similarity=0.011 Sum_probs=68.2
Q ss_pred ccccccccCCCCCCCceEEEcC-CCCeeEEEecC-----------CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcc
Q 019290 23 SKSYQQLQLPGVVGPESLAFDC-NGEGPYVGVSD-----------GRILKWKAANSGWTEFATTAPHRAREICDGSTNTT 90 (343)
Q Consensus 23 ~~~~~~~~~~~~~~p~~l~~d~-~g~~l~~~~~~-----------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (343)
..|....++|. .+...++.+ +|+++.++..+ ..++.||+.+.+|..+...+.
T Consensus 176 ~~W~~~~~~P~--~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~-------------- 239 (656)
T 1k3i_A 176 GRWGPTIDLPI--VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT-------------- 239 (656)
T ss_dssp CEEEEEEECSS--CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC--------------
T ss_pred CeeeeeccCCC--CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC--------------
Confidence 34444455665 456777777 77755554321 158899999888765532110
Q ss_pred cCCCcCCeeeEEEeCCCCeEEEEeCC--CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEe
Q 019290 91 LEPLCGRPLGIKFNPVTCDLYIADAY--FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTD 160 (343)
Q Consensus 91 ~~~~~~~p~gi~~~~~~~~l~v~~~~--~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~ 160 (343)
.......+.++.. ++.||+.... ..+++||+.+.+++.+...... ..-..+++-+ +|++|+.-
T Consensus 240 --~~~~~~~~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~---R~~~s~~~~~-dg~iyv~G 304 (656)
T 1k3i_A 240 --KHDMFCPGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA---RGYQSSATMS-DGRVFTIG 304 (656)
T ss_dssp --SCCCSSCEEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC---CSSCEEEECT-TSCEEEEC
T ss_pred --CCCCccccccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCCcc---ccccceEEec-CCeEEEEe
Confidence 0011123456665 7888887432 2499999999988877543322 2234556665 48888754
No 297
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.65 E-value=0.048 Score=53.41 Aligned_cols=40 Identities=10% Similarity=0.013 Sum_probs=26.7
Q ss_pred CeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecC
Q 019290 292 PVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSS 333 (343)
Q Consensus 292 ~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~ 333 (343)
+.++.+|. +|+++-.+..+.+.....++. +.+|+.||+..
T Consensus 496 g~l~a~D~~tG~~lw~~~~~~~~~~~p~ty--~~~G~qyv~~~ 536 (689)
T 1yiq_A 496 GRVIAYAADTGEKLWEQPAASGVMAAPVTY--SVDGEQYVTFM 536 (689)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEEE
T ss_pred CcEEEEECCCCccceeeeCCCCcccCceEE--EECCEEEEEEE
Confidence 57889997 699988887765533333333 34889887643
No 298
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.62 E-value=0.031 Score=49.29 Aligned_cols=198 Identities=12% Similarity=0.172 Sum_probs=107.2
Q ss_pred ccccccccCCCCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEE
Q 019290 23 SKSYQQLQLPGVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIK 102 (343)
Q Consensus 23 ~~~~~~~~~~~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (343)
-...+++.+|......+|.+.+++. +|+....+.|++-...+..|+...... ........++.
T Consensus 24 g~~W~~~~~~~~~~~~~v~~~~~~~-~~~~G~~g~i~~s~DgG~tW~~~~~~~----------------~~~~~~~~~i~ 86 (327)
T 2xbg_A 24 YNPWEAIQLPTTATILDMSFIDRHH-GWLVGVNATLMETRDGGQTWEPRTLVL----------------DHSDYRFNSVS 86 (327)
T ss_dssp SCCEEEEECSCSSCEEEEEESSSSC-EEEEETTTEEEEESSTTSSCEECCCCC----------------SCCCCEEEEEE
T ss_pred CCCceEeecCCCCcEEEEEECCCCc-EEEEcCCCeEEEeCCCCCCCeECCCCC----------------CCCCccEEEEE
Confidence 3345666667544677888887777 555556777888765556777653110 00111245788
Q ss_pred EeCCCCeEEEEeCCCeEEEEeCCCC-eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCc
Q 019290 103 FNPVTCDLYIADAYFGLMVVGPNGG-QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSG 181 (343)
Q Consensus 103 ~~~~~~~l~v~~~~~gi~~~d~~~~-~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
+++ +.+|++....+|++ ..+.| .++.+.... ..+ ..+..++..+ ++++|++.. .+
T Consensus 87 ~~~--~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~-~~~-~~~~~i~~~~-~~~~~~~~~------------------~g 142 (327)
T 2xbg_A 87 FQG--NEGWIVGEPPIMLH-TTDGGQSWSQIPLDP-KLP-GSPRLIKALG-NGSAEMITN------------------VG 142 (327)
T ss_dssp EET--TEEEEEEETTEEEE-ESSTTSSCEECCCCT-TCS-SCEEEEEEEE-TTEEEEEET------------------TC
T ss_pred ecC--CeEEEEECCCeEEE-ECCCCCCceECcccc-CCC-CCeEEEEEEC-CCCEEEEeC------------------Cc
Confidence 874 67887743344665 44433 345443211 111 1246677766 488888543 34
Q ss_pred eEEEEeCCCCceEEeecCC-CCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeec-CCCCCCceeeCCCCC
Q 019290 182 RLLKYDPLKKNVTVMYNGL-SFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAE-MPRFPDNIKSDSKGE 259 (343)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~~-~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~ 259 (343)
.|++-.-.+...+...... ....++++.+++. +|+.. ..+.+++-+-.+. ...+.+.. .......++++++|+
T Consensus 143 ~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~d~gG---~tW~~~~~~~~~~~~~~~~~~~g~ 217 (327)
T 2xbg_A 143 AIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTWEPGQ---TAWEPHNRTTSRRLHNMGFTPDGR 217 (327)
T ss_dssp CEEEESSTTSSEEEEECSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEECTTC---SSCEEEECCSSSCEEEEEECTTSC
T ss_pred cEEEEcCCCCCCEEeecCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEeCCCC---CceeECCCCCCCccceeEECCCCC
Confidence 5776543334455443322 2345677777765 44444 3567777653211 12222211 111223466788899
Q ss_pred EEEEecc
Q 019290 260 FWIAMNS 266 (343)
Q Consensus 260 lwi~~~~ 266 (343)
+|++...
T Consensus 218 ~~~~~~~ 224 (327)
T 2xbg_A 218 LWMIVNG 224 (327)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 9988765
No 299
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.60 E-value=0.0098 Score=54.84 Aligned_cols=158 Identities=13% Similarity=0.085 Sum_probs=90.3
Q ss_pred CCceEEEcCCCCeeE----EEecCCEEEEEEcCCC-----C----eEEeeecCCCccccccCCCCCcccCCCcCCeeeEE
Q 019290 36 GPESLAFDCNGEGPY----VGVSDGRILKWKAANS-----G----WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIK 102 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~----~~~~~g~i~~~d~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (343)
.+.+++++++|+.+. ++..++.|..||..+. . +..+. ........+.+++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-----------------~~~~h~~~V~~v~ 156 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-----------------LLKDAGGMVIDMK 156 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-----------------CCCSGGGSEEEEE
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee-----------------ccCCCCCceEEEE
Confidence 478999999999777 4556788999986542 0 01111 0001123567899
Q ss_pred EeCCCCeEEEEeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCc
Q 019290 103 FNPVTCDLYIADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSG 181 (343)
Q Consensus 103 ~~~~~~~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
+++.++.++++...+| |..+|.+++..... ... ....+..+++.+ +|...++... .+
T Consensus 157 ~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~-~~~---~~~~v~~v~wsp-dg~~lasgs~-----------------dg 214 (434)
T 2oit_A 157 WNPTVPSMVAVCLADGSIAVLQVTETVKVCA-TLP---STVAVTSVCWSP-KGKQLAVGKQ-----------------NG 214 (434)
T ss_dssp ECSSCTTEEEEEETTSCEEEEEESSSEEEEE-EEC---GGGCEEEEEECT-TSSCEEEEET-----------------TS
T ss_pred ECCCCCCEEEEEECCCeEEEEEcCCCcceee-ccC---CCCceeEEEEcC-CCCEEEEEcC-----------------CC
Confidence 9984355555434445 89999987743211 111 123578899999 4765553322 46
Q ss_pred eEEEEeCCCCceEEeecCCC-------CcceeEEecCCCEEEEEEcCCC------eEEEEEccC
Q 019290 182 RLLKYDPLKKNVTVMYNGLS-------FPNGVALSNNNSFLLLAESATL------KILRFWLQG 232 (343)
Q Consensus 182 ~v~~~d~~~~~~~~~~~~~~-------~~~~i~~~~d~~~lyv~~~~~~------~i~~~~~~~ 232 (343)
.|..||........+..... ....+++++++..+.......+ .+..|++..
T Consensus 215 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 215 TVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp CEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred cEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 78888887222222221111 3456777776654444443332 377777653
No 300
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.59 E-value=0.04 Score=53.81 Aligned_cols=40 Identities=10% Similarity=0.112 Sum_probs=26.1
Q ss_pred CeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEecC
Q 019290 292 PVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGSS 333 (343)
Q Consensus 292 ~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~~ 333 (343)
+.++.+|. .|+++..+..+.+.....++. ..+|++|++..
T Consensus 479 g~l~a~d~~tG~~l~~~~~~~~~~~~p~~~--~~~G~~yva~~ 519 (668)
T 1kv9_A 479 GQMHAYSADKGEALWQFEAQSGIVAAPMTF--ELAGRQYVAIM 519 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEEE
T ss_pred ccchhhhhhcChhheEecCCCCcccCceEE--EECCEEEEEEE
Confidence 58889997 588888887665432233332 34888887643
No 301
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.58 E-value=0.031 Score=48.39 Aligned_cols=222 Identities=11% Similarity=0.035 Sum_probs=117.0
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC------CeEEEEeCCCCeE
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY------FGLMVVGPNGGQA 129 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~------~gi~~~d~~~~~~ 129 (343)
..++.||+.+..|..+...+ ....-++++.. ++.||+.... +.++++|+.+.++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p------------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELP------------------SRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQW 89 (302)
T ss_dssp CCEEEEETTTTEEEEECCCS------------------SCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEE
T ss_pred CcEEEEcCcCCcEeEcccCC------------------cccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCce
Confidence 35889999988888763211 11112344444 5778876321 3489999999998
Q ss_pred EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC--cceeE
Q 019290 130 QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF--PNGVA 207 (343)
Q Consensus 130 ~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~i~ 207 (343)
+.+...... ..-+.+++- ++.+|+.-... .......+++||+.+.+.+.+...... ....+
T Consensus 90 ~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~------------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 152 (302)
T 2xn4_A 90 TSVANMRDR---RSTLGAAVL--NGLLYAVGGFD------------GSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVG 152 (302)
T ss_dssp EEECCCSSC---CBSCEEEEE--TTEEEEEEEEC------------SSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred eeCCCCCcc---ccceEEEEE--CCEEEEEcCCC------------CCccCceEEEEeCCCCeEeecCCCCCcccCceEE
Confidence 887543322 122344443 37888843110 001124689999998887765422111 12223
Q ss_pred EecCCCEEEEEEcC-------CCeEEEEEccCccccccceeeecCCC--CCCceeeCCCCCEEEEeccCCCccccccccc
Q 019290 208 LSNNNSFLLLAESA-------TLKILRFWLQGERTTYTPQLFAEMPR--FPDNIKSDSKGEFWIAMNSARGKIESNKKTA 278 (343)
Q Consensus 208 ~~~d~~~lyv~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~--~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~ 278 (343)
.. ++.+|+..-. ...+++||+..+ ....+...+. .-..++. -+++||+.....+...
T Consensus 153 ~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~----~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~------- 218 (302)
T 2xn4_A 153 VV--GGLLYAVGGYDVASRQCLSTVECYNATTN----EWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLV------- 218 (302)
T ss_dssp EE--TTEEEEECCEETTTTEECCCEEEEETTTT----EEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSB-------
T ss_pred EE--CCEEEEEeCCCCCCCccccEEEEEeCCCC----cEEECCCCccccccccEEE-ECCEEEEECCCCCCcc-------
Confidence 32 3457776311 356889997652 2222222221 0112222 2578888754322211
Q ss_pred cccccCCCcccCCCeEEEECCCCCEEEEee-CCCCCccCCceeEEEeCCEEEEecCC-----CCeEEEEcC
Q 019290 279 FCEETAKPWFLRDPVGVKFDVNGNVVDVLD-GNEGNTLNSVSEVQEYGEYLYTGSSV-----QPYVVVIKA 343 (343)
Q Consensus 279 ~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~i~~~~-----~~~i~~~~~ 343 (343)
...+.+||++...-..+. .|.. .....+...+++||+-+-. .+.+.+|++
T Consensus 219 ------------~~~~~~yd~~~~~W~~~~~~~~~---r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 219 ------------RKSVEVYDPTTNAWRQVADMNMC---RRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp ------------CCCEEEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred ------------cceEEEEeCCCCCEeeCCCCCCc---cccCeEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 247889998755444433 2222 1222344458888865432 245777764
No 302
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.57 E-value=0.038 Score=49.12 Aligned_cols=177 Identities=7% Similarity=-0.029 Sum_probs=99.7
Q ss_pred CceEEEcCCCCeeE-EEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 37 PESLAFDCNGEGPY-VGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 37 p~~l~~d~~g~~l~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
...+.+..+++.+. ++..++.|..||..+++...-.. ....+..+.+++ +.+.++ .
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~--------------------~~~~v~~v~~~~--~~~~~~-~ 117 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK--------------------VDAPVKDLFLSR--EFIVVS-Y 117 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE--------------------CSSCEEEEEECS--SEEEEE-E
T ss_pred eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE--------------------CCCceEEEEEcC--CEEEEE-E
Confidence 55677777777553 45666789999987764332111 112356777775 455555 3
Q ss_pred CCeEEEEeCCCC-eEEEcccccCCCCccCcce-eEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc-
Q 019290 116 YFGLMVVGPNGG-QAQQLASSAGGIPFRFTND-LDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN- 192 (343)
Q Consensus 116 ~~gi~~~d~~~~-~~~~~~~~~~~~~~~~~~~-i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~- 192 (343)
...++.+|..++ +. +.... . +.+ .++.+ +.+.++.. ...+.|..+|..++.
T Consensus 118 ~~~i~i~d~~~~~~~--~~~~~-~-----~~~~~~~s~--~~la~~sg----------------~~~g~v~iwd~~~~~~ 171 (355)
T 3vu4_A 118 GDVISVFKFGNPWKR--ITDDI-R-----FGGVCEFSN--GLLVYSNE----------------FNLGQIHITKLQSSGS 171 (355)
T ss_dssp TTEEEEEESSTTCCB--SSCCE-E-----EEEEEEEET--TEEEEEES----------------SCTTCEEEEECCC---
T ss_pred cCEEEEEECCCCcee--eEEec-c-----CCceEEEEc--cEEEEeCC----------------CcCcEEEEEECCCCCc
Confidence 567899998765 21 11100 0 111 23333 34444311 114567777776544
Q ss_pred ----------------eEEeecCCCCcceeEEecCCCEEEEEEcCCCe-EEEEEccCccccccceeeec--CCCCCCcee
Q 019290 193 ----------------VTVMYNGLSFPNGVALSNNNSFLLLAESATLK-ILRFWLQGERTTYTPQLFAE--MPRFPDNIK 253 (343)
Q Consensus 193 ----------------~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~-i~~~~~~~~~~~~~~~~~~~--~~~~p~~i~ 253 (343)
...+.........+++++++..|. +.+.++. |..|++..... ...+.. ..+....++
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~-s~s~d~~~v~iwd~~~~~~---~~~~~~g~h~~~v~~~~ 247 (355)
T 3vu4_A 172 ATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVA-TCSQDGTIIRVFKTEDGVL---VREFRRGLDRADVVDMK 247 (355)
T ss_dssp ---------------CCEEECCCSSCEEEEEECTTSSEEE-EEETTCSEEEEEETTTCCE---EEEEECTTCCSCEEEEE
T ss_pred cccccccccccccCcccEEEEccCCceEEEEECCCCCEEE-EEeCCCCEEEEEECCCCcE---EEEEEcCCCCCcEEEEE
Confidence 344444445678999999998554 5556787 99999875221 122221 122234577
Q ss_pred eCCCCCEEEEecc
Q 019290 254 SDSKGEFWIAMNS 266 (343)
Q Consensus 254 ~d~~G~lwi~~~~ 266 (343)
++++|++.++...
T Consensus 248 ~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 248 WSTDGSKLAVVSD 260 (355)
T ss_dssp ECTTSCEEEEEET
T ss_pred ECCCCCEEEEEEC
Confidence 8899987776654
No 303
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.54 E-value=0.0018 Score=61.00 Aligned_cols=125 Identities=18% Similarity=0.362 Sum_probs=76.9
Q ss_pred CCCCCceEEEcCC-CCeeEEE-ec---------------------CCEEEEEEcCCC-------CeEEeeecCCCcccc-
Q 019290 33 GVVGPESLAFDCN-GEGPYVG-VS---------------------DGRILKWKAANS-------GWTEFATTAPHRARE- 81 (343)
Q Consensus 33 ~~~~p~~l~~d~~-g~~l~~~-~~---------------------~g~i~~~d~~~~-------~~~~~~~~~~~~~~~- 81 (343)
.+..||++.+++. |. +|++ ++ .|.|+++.+..+ +|..+.....-....
T Consensus 382 ~mdRpEdi~v~p~~g~-vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQ-VYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CEECEEEEEECTTTCC-EEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred cccCccceeEcCCCCE-EEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 3447999999984 66 5543 32 278999976432 245554321110000
Q ss_pred -ccCCCCCcccCCCcCCeeeEEEeCCCCeEEEE-eCC------------CeEEEEeCCCCeEEEcccccCCCCccCccee
Q 019290 82 -ICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIA-DAY------------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDL 147 (343)
Q Consensus 82 -~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~-~~~------------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i 147 (343)
...+.........+..|.+|.+++ +|+|||+ |.. ++++++++++|+++.+..... ...++++
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~---~aEpnGi 536 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI---GCEVTGI 536 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT---TCEEEEE
T ss_pred ccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC---CccccCC
Confidence 000111112223467899999998 8999994 321 269999999999888764322 2458999
Q ss_pred EEeCCCCeEEEEeCC
Q 019290 148 DIDPNTGIVYFTDSS 162 (343)
Q Consensus 148 ~~d~~dg~l~v~~~~ 162 (343)
++.|+...|||+-++
T Consensus 537 afSPD~ktLfV~vQH 551 (592)
T 4a9v_A 537 SFSPDQKTLFVGIQH 551 (592)
T ss_dssp EECTTSSEEEEEEES
T ss_pred EECCCCCEEEEEEeC
Confidence 999953468886655
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.53 E-value=0.037 Score=47.85 Aligned_cols=221 Identities=7% Similarity=0.041 Sum_probs=116.8
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC------CeEEEEeCCCCe-
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY------FGLMVVGPNGGQ- 128 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~------~gi~~~d~~~~~- 128 (343)
..++.||+.+.+|..+...+ ....-+.++.. ++.||+.... +.++++|+.+.+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p------------------~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSIT------------------RKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CCEEEEETTTTEEEECCCCS------------------SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred eEEEEEcCCCCeEEeCCCCC------------------hhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 36899999998888764211 11112344444 5678876321 349999999888
Q ss_pred --EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC--cc
Q 019290 129 --AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF--PN 204 (343)
Q Consensus 129 --~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~ 204 (343)
++.+...... ..-..++.. ++.+|+.-.... ......+++||+.+.+.+.+...... ..
T Consensus 91 ~~W~~~~~~p~~---r~~~~~~~~--~~~lyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 153 (301)
T 2vpj_A 91 GVWYSVAPMNVR---RGLAGATTL--GDMIYVSGGFDG------------SRRHTSMERYDPNIDQWSMLGDMQTAREGA 153 (301)
T ss_dssp CCCEEECCCSSC---CBSCEEEEE--TTEEEEECCBCS------------SCBCCEEEEEETTTTEEEEEEECSSCCBSC
T ss_pred CeeEECCCCCCC---ccceeEEEE--CCEEEEEcccCC------------CcccceEEEEcCCCCeEEECCCCCCCcccc
Confidence 7776443322 122334443 378888532210 01134699999998887765422111 12
Q ss_pred eeEEecCCCEEEEEEc-----CCCeEEEEEccCccccccceeeecCCCCCC---ceeeCCCCCEEEEeccCCCccccccc
Q 019290 205 GVALSNNNSFLLLAES-----ATLKILRFWLQGERTTYTPQLFAEMPRFPD---NIKSDSKGEFWIAMNSARGKIESNKK 276 (343)
Q Consensus 205 ~i~~~~d~~~lyv~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~---~i~~d~~G~lwi~~~~~~~~~~~~~~ 276 (343)
..++. + +.+|+..- ....+++|++.. .+...+...+. +. .++. -+++||+.........
T Consensus 154 ~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~----~~W~~~~~~p~-~r~~~~~~~-~~~~i~v~GG~~~~~~----- 220 (301)
T 2vpj_A 154 GLVVA-S-GVIYCLGGYDGLNILNSVEKYDPHT----GHWTNVTPMAT-KRSGAGVAL-LNDHIYVVGGFDGTAH----- 220 (301)
T ss_dssp EEEEE-T-TEEEEECCBCSSCBCCCEEEEETTT----TEEEEECCCSS-CCBSCEEEE-ETTEEEEECCBCSSSB-----
T ss_pred eEEEE-C-CEEEEECCCCCCcccceEEEEeCCC----CcEEeCCCCCc-ccccceEEE-ECCEEEEEeCCCCCcc-----
Confidence 23332 3 45777632 135689999765 23333322221 11 1222 2577888754322211
Q ss_pred cccccccCCCcccCCCeEEEECCCCCEEEEee-CCCCCccCCceeEEEeCCEEEEecCCC-----CeEEEEcC
Q 019290 277 TAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD-GNEGNTLNSVSEVQEYGEYLYTGSSVQ-----PYVVVIKA 343 (343)
Q Consensus 277 ~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~i~~~~~-----~~i~~~~~ 343 (343)
...+.+||++...-..+. .|.. .....+...+++||+.+-.. +.+.+|++
T Consensus 221 --------------~~~v~~yd~~~~~W~~~~~~p~~---r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 221 --------------LSSVEAYNIRTDSWTTVTSMTTP---RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp --------------CCCEEEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEECCBCSSSBEEEEEEEET
T ss_pred --------------cceEEEEeCCCCcEEECCCCCCc---ccceeEEEECCEEEEEcCcCCCcccccEEEEcC
Confidence 247889998755444433 2222 12223334488888655432 45677763
No 305
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.53 E-value=0.036 Score=47.70 Aligned_cols=191 Identities=8% Similarity=-0.049 Sum_probs=99.7
Q ss_pred eEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCe
Q 019290 39 SLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFG 118 (343)
Q Consensus 39 ~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~g 118 (343)
..+...++..+.++..++.+..++..+........ .........+.+.+.+..+..+.....
T Consensus 112 ~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~s~~~d~~ 173 (318)
T 4ggc_A 112 VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATL------------------SGHSQEVCGLRWAPDGRHLASGGNDNL 173 (318)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE------------------ECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeecCCCEEEEEecCCceEeeecCCCceeEEEE------------------cCccCceEEEEEcCCCCEEEEEecCcc
Confidence 34444455555556666666666554432211110 111223456777773444555543334
Q ss_pred EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEE-EEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEee
Q 019290 119 LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVY-FTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMY 197 (343)
Q Consensus 119 i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~-v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 197 (343)
|..+|.++++...............+..++..+.+..+. ++..+ ..+.|..+|..........
T Consensus 174 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~----------------~~~~i~lwd~~~~~~~~~~ 237 (318)
T 4ggc_A 174 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT----------------SDRHIRIWNVCSGACLSAV 237 (318)
T ss_dssp EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT----------------TTCEEEEEETTTCCEEEEE
T ss_pred eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC----------------CCCEEEEEecccccccccc
Confidence 888898776432111111111113355566665323333 32221 1455777787766555444
Q ss_pred cCCCCcceeEEecCCCEEEEEE-cCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 198 NGLSFPNGVALSNNNSFLLLAE-SATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 198 ~~~~~~~~i~~~~d~~~lyv~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
........+++.++++.++.+. ..++.|..|++..... ...+..-.+....+++.++|++.++...
T Consensus 238 ~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~---~~~l~gH~~~V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 238 DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK---VAELKGHTSRVLSLTMSPDGATVASAAA 304 (318)
T ss_dssp ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE---EEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcE---EEEEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 4445567788889888777653 4578999999864221 1222111122345678999987776544
No 306
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.0031 Score=59.83 Aligned_cols=193 Identities=8% Similarity=-0.097 Sum_probs=107.5
Q ss_pred CCceEEEcCC------CCeeEEEecCCEEEEEEcCCCCeE---EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 36 GPESLAFDCN------GEGPYVGVSDGRILKWKAANSGWT---EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 36 ~p~~l~~d~~------g~~l~~~~~~g~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
...++++.|+ +.++.++..++.|..||..++... .+.... +. .........+..+++.+
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~--p~---------~~l~~h~~~v~sv~~s~- 276 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEK--PS---------LTLSLADSLITTFDFLS- 276 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCS--CS---------EEECCTTTCEEEEEESS-
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecC--ce---------EEEEcCCCCEEEEEecC-
Confidence 3567888876 566777888999999998654311 000000 00 00111223467888887
Q ss_pred CCeEEEEeCCCeEEEEeCCCCeEE-EcccccCCCCccCccee--EEeCCCC-eEEEEeCCcccccccceeeeeecCCCce
Q 019290 107 TCDLYIADAYFGLMVVGPNGGQAQ-QLASSAGGIPFRFTNDL--DIDPNTG-IVYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 107 ~~~l~v~~~~~gi~~~d~~~~~~~-~~~~~~~~~~~~~~~~i--~~d~~dg-~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
++.|..+.....|..+|.+++... ...... ...+.++ +..+ +| .+.++... .+.
T Consensus 277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H----~~~V~sv~~~~s~-~g~~~laS~S~-----------------D~t 334 (524)
T 2j04_B 277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVH----DSYILSVSTAYSD-FEDTVVSTVAV-----------------DGY 334 (524)
T ss_dssp SSEEEEEETTSEEEEEETTBCSSCSEEEECS----SSCEEEEEEECCT-TSCCEEEEEET-----------------TSE
T ss_pred CCeEEEEeCCCEEEEEECCCCCCceEEeecc----cccEEEEEEEcCC-CCCeEEEEecc-----------------CCe
Confidence 667777754344889999865311 111111 1346777 3455 46 67665543 456
Q ss_pred EEEEeCCCCceE-EeecCC--CCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCC
Q 019290 183 LLKYDPLKKNVT-VMYNGL--SFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGE 259 (343)
Q Consensus 183 v~~~d~~~~~~~-~~~~~~--~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 259 (343)
|..+|..+++.. .+.... .....++++|+++. +++....+.|..|++.... ....+..-.+....+++.++|+
T Consensus 335 vklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~---~~~~l~gH~~~V~sva~Sp~g~ 410 (524)
T 2j04_B 335 FYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAF---AVHPLVSRETTITAIGVSRLHP 410 (524)
T ss_dssp EEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTT---CCEEEEECSSCEEEEECCSSCC
T ss_pred EEEEECCCCCcccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECcccc---cceeeecCCCceEEEEeCCCCC
Confidence 778887644321 122111 12467999999885 5555667889999876421 1122222222244567778887
Q ss_pred EEEEecc
Q 019290 260 FWIAMNS 266 (343)
Q Consensus 260 lwi~~~~ 266 (343)
+.++...
T Consensus 411 ~l~Sgs~ 417 (524)
T 2j04_B 411 MVLAGSA 417 (524)
T ss_dssp BCEEEET
T ss_pred eEEEEEC
Confidence 6555443
No 307
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.011 Score=56.12 Aligned_cols=147 Identities=10% Similarity=-0.057 Sum_probs=81.2
Q ss_pred CeeeEEEeCC-----CCeEEEEeCCCe-EEEEeCCCCeEE---E--ccc---ccCCCCccCcceeEEeCCCCeEEEEeCC
Q 019290 97 RPLGIKFNPV-----TCDLYIADAYFG-LMVVGPNGGQAQ---Q--LAS---SAGGIPFRFTNDLDIDPNTGIVYFTDSS 162 (343)
Q Consensus 97 ~p~gi~~~~~-----~~~l~v~~~~~g-i~~~d~~~~~~~---~--~~~---~~~~~~~~~~~~i~~d~~dg~l~v~~~~ 162 (343)
.+..+++.+. ++.++++...+| |..+|..+++.. . ... ...+ ....+..+++.+ ++.|..+..
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~-h~~~v~sv~~s~-~~~lasgs~- 285 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL-ADSLITTFDFLS-PTTVVCGFK- 285 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC-TTTCEEEEEESS-SSEEEEEET-
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc-CCCCEEEEEecC-CCeEEEEeC-
Confidence 4677888873 134444334455 888888755311 0 000 0011 113467788877 465544332
Q ss_pred cccccccceeeeeecCCCceEEEEeCCCCce--EEeecCCCCccee--EEecCCCEEEEEEcCCCeEEEEEccCcccccc
Q 019290 163 IYFQRRQYFMSIATGDRSGRLLKYDPLKKNV--TVMYNGLSFPNGV--ALSNNNSFLLLAESATLKILRFWLQGERTTYT 238 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~i--~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~ 238 (343)
.+.|..+|..++.. ..+...-.....+ ++.+++..+.++.+.++.|..||+.....
T Consensus 286 -----------------DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~--- 345 (524)
T 2j04_B 286 -----------------NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT--- 345 (524)
T ss_dssp -----------------TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH---
T ss_pred -----------------CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc---
Confidence 46788888875432 2233333445666 45666634667777889999999864221
Q ss_pred ceeeec-CC-CCCCceeeCCCCCEEEEecc
Q 019290 239 PQLFAE-MP-RFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 239 ~~~~~~-~~-~~p~~i~~d~~G~lwi~~~~ 266 (343)
...+.. .. +....+++.++|..+++...
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~ 375 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDG 375 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTEEEEECS
T ss_pred ccccccccccCcccceEeCCCcCeEEEeCC
Confidence 112211 11 11346788888888777654
No 308
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.39 E-value=0.062 Score=51.52 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=26.2
Q ss_pred CeEEEECC-CCCEEEEeeCCCCCccCCceeEEEeCCEEEEec
Q 019290 292 PVGVKFDV-NGNVVDVLDGNEGNTLNSVSEVQEYGEYLYTGS 332 (343)
Q Consensus 292 ~~v~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~i~~ 332 (343)
+.++.+|. +|+++-.+..+.+.....++. +.+|++||+.
T Consensus 507 g~l~A~D~~tG~~lW~~~~~~g~~a~P~~y--~~~G~qYv~~ 546 (582)
T 1flg_A 507 GYFKAFDAKSGKELWKFQTGSGIVSPPITW--EQDGEQYLGV 546 (582)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEE
T ss_pred CcEEEEECCCCCEEEEecCCCCcccCceEE--EECCEEEEEE
Confidence 57889997 699988887765532222222 3488988874
No 309
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.36 E-value=0.037 Score=49.96 Aligned_cols=190 Identities=10% Similarity=0.036 Sum_probs=97.3
Q ss_pred CceEEEcC--------CCCeeEEEecCCEEEEEEcCCCCe-EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCC
Q 019290 37 PESLAFDC--------NGEGPYVGVSDGRILKWKAANSGW-TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVT 107 (343)
Q Consensus 37 p~~l~~d~--------~g~~l~~~~~~g~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~ 107 (343)
..++++.+ +|+++.++..++.|..||..++.. .... .....+..++++|.+
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~--------------------~~~~~v~~v~~~p~~ 198 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY--------------------PLSSPGISVQFRPSN 198 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE--------------------ECSSCEEEEEEETTE
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec--------------------CCCCCcEEEEECCCC
Confidence 56888876 788777888999999999865432 2221 111245689999844
Q ss_pred Ce-EEEEeCCCeEEEEeCCCCeEEEccccc---------------------CCCCccCcceeEEeCCCCeEEEEeCCccc
Q 019290 108 CD-LYIADAYFGLMVVGPNGGQAQQLASSA---------------------GGIPFRFTNDLDIDPNTGIVYFTDSSIYF 165 (343)
Q Consensus 108 ~~-l~v~~~~~gi~~~d~~~~~~~~~~~~~---------------------~~~~~~~~~~i~~d~~dg~l~v~~~~~~~ 165 (343)
.+ |..+....-|..+|..+++........ .......+..+.+.+.|+...++...
T Consensus 199 ~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~--- 275 (393)
T 4gq1_A 199 PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCK--- 275 (393)
T ss_dssp EEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECT---
T ss_pred CceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeC---
Confidence 44 444433334888998876532211000 00011234455554224555554332
Q ss_pred ccccceeeeeecCCCceEEEEeCCCCceEE-e------------------ecCCCCcceeEEec-CCCEEEEEEcCCCeE
Q 019290 166 QRRQYFMSIATGDRSGRLLKYDPLKKNVTV-M------------------YNGLSFPNGVALSN-NNSFLLLAESATLKI 225 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~------------------~~~~~~~~~i~~~~-d~~~lyv~~~~~~~i 225 (343)
.+.+..+|...+.... + ........+.++.+ .++.+.++...++.|
T Consensus 276 --------------d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V 341 (393)
T 4gq1_A 276 --------------SGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLI 341 (393)
T ss_dssp --------------TSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEE
T ss_pred --------------CCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEE
Confidence 3345555543322110 0 00111122333443 344455667778999
Q ss_pred EEEEccCccccccceeeecCCCCCCceeeCCCCCEEEEecc
Q 019290 226 LRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~ 266 (343)
..|+...... .............++++++|+++.+...
T Consensus 342 ~lwd~~~~~~---~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 342 QLINTYEKDS---NSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp EEEETTCTTC---CEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred EEEECCCCcE---EEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 9999875322 1222222222456889999988776654
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.35 E-value=0.07 Score=46.98 Aligned_cols=230 Identities=12% Similarity=0.032 Sum_probs=120.7
Q ss_pred CceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC
Q 019290 37 PESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY 116 (343)
Q Consensus 37 p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~ 116 (343)
..+|++++ ++ +|+....+.|++-...+..|+.+.... ...+.+..+...+ ++.+|++...
T Consensus 82 ~~~i~~~~-~~-~~~~g~~g~i~~S~DgG~tW~~~~~~~-----------------~~~~~~~~i~~~~-~~~~~~~~~~ 141 (327)
T 2xbg_A 82 FNSVSFQG-NE-GWIVGEPPIMLHTTDGGQSWSQIPLDP-----------------KLPGSPRLIKALG-NGSAEMITNV 141 (327)
T ss_dssp EEEEEEET-TE-EEEEEETTEEEEESSTTSSCEECCCCT-----------------TCSSCEEEEEEEE-TTEEEEEETT
T ss_pred EEEEEecC-Ce-EEEEECCCeEEEECCCCCCceECcccc-----------------CCCCCeEEEEEEC-CCCEEEEeCC
Confidence 35777775 44 676666788888655566777653210 0112356677765 6788887544
Q ss_pred CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCC-CCceEE
Q 019290 117 FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPL-KKNVTV 195 (343)
Q Consensus 117 ~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-~~~~~~ 195 (343)
.+|++-+-....++.+.... ...+..+++++ ++.+|+... .+.+++-... +...+.
T Consensus 142 g~v~~S~DgG~tW~~~~~~~----~~~~~~~~~~~-~~~~~~~g~------------------~G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 142 GAIYRTKDSGKNWQALVQEA----IGVMRNLNRSP-SGEYVAVSS------------------RGSFYSTWEPGQTAWEP 198 (327)
T ss_dssp CCEEEESSTTSSEEEEECSC----CCCEEEEEECT-TSCEEEEET------------------TSSEEEEECTTCSSCEE
T ss_pred ccEEEEcCCCCCCEEeecCC----CcceEEEEEcC-CCcEEEEEC------------------CCcEEEEeCCCCCceeE
Confidence 44766543334465543211 12467788888 588887443 3457776433 233443
Q ss_pred eecC-CCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCC-----CceeeCCCCCEEEEeccCCC
Q 019290 196 MYNG-LSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFP-----DNIKSDSKGEFWIAMNSARG 269 (343)
Q Consensus 196 ~~~~-~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p-----~~i~~d~~G~lwi~~~~~~~ 269 (343)
+... ......+++++++. +|+... .+.+++.+.++. .....+. .+.++ ..++.++++++|++...
T Consensus 199 ~~~~~~~~~~~~~~~~~g~-~~~~~~-~G~~~~s~~D~G---~tW~~~~-~~~~~~~~~~~~v~~~~~~~~~~~g~~--- 269 (327)
T 2xbg_A 199 HNRTTSRRLHNMGFTPDGR-LWMIVN-GGKIAFSDPDNS---ENWGELL-SPLRRNSVGFLDLAYRTPNEVWLAGGA--- 269 (327)
T ss_dssp EECCSSSCEEEEEECTTSC-EEEEET-TTEEEEEETTEE---EEECCCB-CTTSSCCSCEEEEEESSSSCEEEEEST---
T ss_pred CCCCCCCccceeEECCCCC-EEEEeC-CceEEEecCCCC---CeeEecc-CCcccCCcceEEEEecCCCEEEEEeCC---
Confidence 3221 23345677777765 666543 566766543321 1111111 11011 23456778899998765
Q ss_pred ccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeCCCCCccCCceeEE-EeCCEEEEecCCCCeEEEEc
Q 019290 270 KIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDGNEGNTLNSVSEVQ-EYGEYLYTGSSVQPYVVVIK 342 (343)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~i~~~~~~~i~~~~ 342 (343)
+.+++-...|+.-.....+... ...+..+. ..++++|+.+.. ..|++++
T Consensus 270 ----------------------g~i~~S~DgG~tW~~~~~~~~~-~~~~~~v~~~~~~~~~~~G~~-G~i~~~~ 319 (327)
T 2xbg_A 270 ----------------------GALLCSQDGGQTWQQDVDVKKV-PSNFYKILFFSPDQGFILGQK-GILLRYV 319 (327)
T ss_dssp ----------------------TCEEEESSTTSSCEECGGGTTS-SSCCCEEEEEETTEEEEECST-TEEEEEC
T ss_pred ----------------------CeEEEeCCCCcccEEcCccCCC-CCCeEEEEEECCCceEEEcCC-ceEEEEc
Confidence 2455443345544433322111 11233332 357788877654 3677765
No 311
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.33 E-value=0.11 Score=51.28 Aligned_cols=166 Identities=7% Similarity=-0.060 Sum_probs=87.4
Q ss_pred CCCCeeEEEe-c----CCEEEEEEcC---CCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 44 CNGEGPYVGV-S----DGRILKWKAA---NSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 44 ~~g~~l~~~~-~----~g~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
++|+.+|... . ...|++.+.. +++...+....... ........++.+++++..|.++..
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~-------------~~~~~~~~~~~~SPDG~~la~~~~ 182 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWA-------------KDGATALDAWAASDDGRLLAYSVQ 182 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC-----------------EEEEEEEECTTSSEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhc-------------cCCCEEEEeEEECCCCCEEEEEEc
Confidence 7788555432 2 2467888765 55555443211000 000012456888884455555432
Q ss_pred --CC---eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC
Q 019290 116 --YF---GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK 190 (343)
Q Consensus 116 --~~---gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 190 (343)
+. .|+.+|.++++...... .. ....++++.+ |..|+++....... ............|++++..+
T Consensus 183 ~~G~e~~~i~v~dl~tg~~~~~~~--~~---~~~~~~~wsp-D~~l~~~~~~~~~~----~~~~~~~~~~~~v~~~~lgt 252 (741)
T 1yr2_A 183 DGGSDWRTVKFVGVADGKPLADEL--KW---VKFSGLAWLG-NDALLYSRFAEPKE----GQAFQALNYNQTVWLHRLGT 252 (741)
T ss_dssp ETTCSEEEEEEEETTTCCEEEEEE--EE---EESCCCEEST-TSEEEEEECCCC------------CCCCCEEEEEETTS
T ss_pred CCCCceEEEEEEECCCCCCCCccC--CC---ceeccEEEEC-CCEEEEEEecCccc----ccccccCCCCCEEEEEECCC
Confidence 22 49999999987654311 01 1134678888 46777765321000 00000001133588888766
Q ss_pred Cce--EEeecCCC---CcceeEEecCCCEEEEEEcC----CCeEEEEEccC
Q 019290 191 KNV--TVMYNGLS---FPNGVALSNNNSFLLLAESA----TLKILRFWLQG 232 (343)
Q Consensus 191 ~~~--~~~~~~~~---~~~~i~~~~d~~~lyv~~~~----~~~i~~~~~~~ 232 (343)
+.. ..+..... ...+..+++||+.|+++... ...|+.+++++
T Consensus 253 ~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 253 PQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp CGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred CchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence 542 22222211 24578899999988776532 45899999876
No 312
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.22 E-value=0.00037 Score=63.01 Aligned_cols=140 Identities=14% Similarity=0.108 Sum_probs=57.9
Q ss_pred CCCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCe-EEEE
Q 019290 45 NGEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFG-LMVV 122 (343)
Q Consensus 45 ~g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~g-i~~~ 122 (343)
++..+|++..++.|+.+|..+++.. .+.. .......+.. ++.+|++...+| |+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----------------------~~~~s~p~~~-~g~~~v~~s~dg~l~a~ 64 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----------------------DPVLQVPTHV-EEPAFLPDPNDGSLYTL 64 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----------------------CCSCCCC------CCEEECTTTCCEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----------------------CCceecceEc-CCCEEEEeCCCCEEEEE
Confidence 3555899989999999998887643 2211 0011111223 456666633444 9999
Q ss_pred eCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC
Q 019290 123 GPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF 202 (343)
Q Consensus 123 d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 202 (343)
|.++|+........... ......++.. ++.+|++.. .+.|+.+|.++|+...-...
T Consensus 65 d~~tG~~~w~~~~~~~~--~~~~sp~~~~-~~~v~~g~~------------------dg~v~a~D~~tG~~~w~~~~--- 120 (369)
T 2hz6_A 65 GSKNNEGLTKLPFTIPE--LVQASPCRSS-DGILYMGKK------------------QDIWYVIDLLTGEKQQTLSS--- 120 (369)
T ss_dssp -----CCSEECSCCHHH--HHTTCSCC------CCCCEE------------------EEEEEEECCC-------------
T ss_pred ECCCCceeeeeeccCcc--ccccCceEec-CCEEEEEeC------------------CCEEEEEECCCCcEEEEecC---
Confidence 99877643221111000 0001112223 366766332 45699999887775422111
Q ss_pred cceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 203 PNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 203 ~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.......++++.+|+.. .++.|+.++..+
T Consensus 121 ~~~~~~~p~~~~v~~~~-~dg~v~a~d~~t 149 (369)
T 2hz6_A 121 AFADSLSPSTSLLYLGR-TEYTITMYDTKT 149 (369)
T ss_dssp ------------EEEEE-EEEEEECCCSSS
T ss_pred CCcccccccCCEEEEEe-cCCEEEEEECCC
Confidence 11223345667777764 357888888764
No 313
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.19 E-value=0.013 Score=48.46 Aligned_cols=117 Identities=18% Similarity=0.118 Sum_probs=67.6
Q ss_pred ccccCCCCCCCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 27 QQLQLPGVVGPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 27 ~~~~~~~~~~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
.++..++..+..+++++|+|. ||+. .+|.||+.++.+..-.....+. ...|. ..-..=..+.+++
T Consensus 33 ~~iG~~gw~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s~------t~IG~------~Gw~~F~a~~fD~- 97 (236)
T 1tl2_A 33 TLIGKGGWSNFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGRA------KKIGN------GGWNQFQFLFFDP- 97 (236)
T ss_dssp EEEESSSCTTCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHHC------EEEEC------SCGGGCSEEEECT-
T ss_pred cccCccccccceeEEECCCcc-EEEE-eCCeEEEECCCCCCcccccccc------cEecc------cccccceEEEECC-
Confidence 344444566788999999999 8866 8889999998652211110000 00000 0000013577887
Q ss_pred CCeEEEEeCCCeEEEEeCCC-CeEEEcccc-c-CCCCccCcceeEEeCCCCeEEEEe
Q 019290 107 TCDLYIADAYFGLMVVGPNG-GQAQQLASS-A-GGIPFRFTNDLDIDPNTGIVYFTD 160 (343)
Q Consensus 107 ~~~l~v~~~~~gi~~~d~~~-~~~~~~~~~-~-~~~~~~~~~~i~~d~~dg~l~v~~ 160 (343)
++.||.+. ...|+++++-+ +.-..+... . ....-.....|.+++ +|.||..+
T Consensus 98 ~G~LYav~-dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~ 152 (236)
T 1tl2_A 98 NGYLYAVS-KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH 152 (236)
T ss_dssp TSCEEEEE-TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE
T ss_pred CCCEEEeC-CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe
Confidence 99999994 44599998733 222222110 0 000112357889999 59999977
No 314
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.19 E-value=0.2 Score=48.94 Aligned_cols=155 Identities=13% Similarity=0.030 Sum_probs=85.6
Q ss_pred ceEEEcCCCCeeEEEecCC-------------EEEEEEcCCCCe--EEeeecCCCccccccCCCCCcccCCCcCCeeeEE
Q 019290 38 ESLAFDCNGEGPYVGVSDG-------------RILKWKAANSGW--TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIK 102 (343)
Q Consensus 38 ~~l~~d~~g~~l~~~~~~g-------------~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~ 102 (343)
.++++.+||+.+++...+. .|++++..++.. ..+... ........++.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~-----------------~~~~~~~~~~~ 233 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER-----------------TGDPTTFLQSD 233 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC-----------------CCCTTCEEEEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec-----------------CCCCEEEEEEE
Confidence 6899999999666554433 399998876542 122110 01112345778
Q ss_pred EeCCCCeEEEEeCCC----eEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecC
Q 019290 103 FNPVTCDLYIADAYF----GLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGD 178 (343)
Q Consensus 103 ~~~~~~~l~v~~~~~----gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~ 178 (343)
+++++..|.++.... .|+.++..+++.+.+..... .....+. + +|.+|+.... ..
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-----~~~~~~~-~-~g~l~~~s~~--------------~~ 292 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG-----AKYEVHA-W-KDRFYVLTDE--------------GA 292 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS-----CCEEEEE-E-TTEEEEEECT--------------TC
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC-----ceEEEEe-c-CCcEEEEECC--------------CC
Confidence 888555666653222 58888877676666543211 1222222 4 2447775432 11
Q ss_pred CCceEEEEeCCCCc---eEEeecCC--CCcceeEEecCCCEEEEEEcCC--CeEEEEEccC
Q 019290 179 RSGRLLKYDPLKKN---VTVMYNGL--SFPNGVALSNNNSFLLLAESAT--LKILRFWLQG 232 (343)
Q Consensus 179 ~~~~v~~~d~~~~~---~~~~~~~~--~~~~~i~~~~d~~~lyv~~~~~--~~i~~~~~~~ 232 (343)
....|+++|.+++. .+.+.... ....+++++ ++.++++...+ .+|+++++++
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp TTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTC
T ss_pred CCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCC
Confidence 25679999987665 24444322 224556666 34566665443 4566666544
No 315
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.18 E-value=0.0071 Score=55.78 Aligned_cols=166 Identities=6% Similarity=-0.087 Sum_probs=90.2
Q ss_pred eeeEEEeCCCCeEEEEeCCCeEEEEeCCC-----------CeEEEcccccCCCCccCcceeEEeCCCCeEEE----EeCC
Q 019290 98 PLGIKFNPVTCDLYIADAYFGLMVVGPNG-----------GQAQQLASSAGGIPFRFTNDLDIDPNTGIVYF----TDSS 162 (343)
Q Consensus 98 p~gi~~~~~~~~l~v~~~~~gi~~~d~~~-----------~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v----~~~~ 162 (343)
.+-+++++..+.++++. .+++..++... ...........-.....+..+++++ +|+..+ +...
T Consensus 39 ~n~lavs~~~~~l~~~~-~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav~~~sgs~ 116 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGG-ASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSACMMSSEY 116 (434)
T ss_dssp CBCEEEETTTTEEEEEE-TTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEEEEEETTT
T ss_pred ccEEEEecCCCEEEEEC-CCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEEEEeccCC
Confidence 45688888566777764 56766654321 0111110000000012478899999 476555 2222
Q ss_pred cccccccceeeeeecCCCceEEEEeCCCC-----c-------eEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEc
Q 019290 163 IYFQRRQYFMSIATGDRSGRLLKYDPLKK-----N-------VTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWL 230 (343)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-----~-------~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~ 230 (343)
.+.|..||..++ + ...+.........++++|+...++++...++.|..||+
T Consensus 117 -----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~ 179 (434)
T 2oit_A 117 -----------------GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQV 179 (434)
T ss_dssp -----------------EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEE
T ss_pred -----------------CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEc
Confidence 345667765432 1 11111123457889999984446666667899999998
Q ss_pred cCccccccceeeecCCCCCCceeeCCCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEeeC
Q 019290 231 QGERTTYTPQLFAEMPRFPDNIKSDSKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLDG 309 (343)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~~ 309 (343)
..... .............++.+++|+..++... .+.|..+|.+++....+..
T Consensus 180 ~~~~~---~~~~~~~~~~v~~v~wspdg~~lasgs~------------------------dg~v~iwd~~~~~~~~~~~ 231 (434)
T 2oit_A 180 TETVK---VCATLPSTVAVTSVCWSPKGKQLAVGKQ------------------------NGTVVQYLPTLQEKKVIPC 231 (434)
T ss_dssp SSSEE---EEEEECGGGCEEEEEECTTSSCEEEEET------------------------TSCEEEECTTCCEEEEECC
T ss_pred CCCcc---eeeccCCCCceeEEEEcCCCCEEEEEcC------------------------CCcEEEEccCCcccccccC
Confidence 75311 1111111223456788999866555444 3467778887666555543
No 316
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.18 E-value=0.1 Score=45.47 Aligned_cols=213 Identities=14% Similarity=0.102 Sum_probs=108.1
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC------------CeEEEEe
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY------------FGLMVVG 123 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~------------~gi~~~d 123 (343)
..++.||+.+.+|....... +....-+.++.. ++.||+.... +.++++|
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~-----------------~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~d 84 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAE-----------------QIPRNHSSIVTQ--QNQVYVVGGLYVDEENKDQPLQSYFFQLD 84 (318)
T ss_dssp SEEEEEETTTTEEEEEEECT-----------------TSCSSEEEEECS--SSCEEEEESSCC-------CCCBEEEEEE
T ss_pred cceEEECCCCCceecccCCc-----------------cCCccceEEEEE--CCEEEEECCcccCccccCCCccccEEEEe
Confidence 35899999998887632110 011112233332 5777775331 1178999
Q ss_pred CCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC-
Q 019290 124 PNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF- 202 (343)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~- 202 (343)
+.+.+++.+...... ..-+.++... +.+|+.-.... ........+++||+.+.+.+.+......
T Consensus 85 ~~~~~W~~~~~~p~~---r~~~~~~~~~--~~iyv~GG~~~----------~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 149 (318)
T 2woz_A 85 NVSSEWVGLPPLPSA---RCLFGLGEVD--DKIYVVAGKDL----------QTEASLDSVLCYDPVAAKWSEVKNLPIKV 149 (318)
T ss_dssp TTTTEEEECSCBSSC---BCSCEEEEET--TEEEEEEEEBT----------TTCCEEEEEEEEETTTTEEEEECCCSSCE
T ss_pred CCCCcEEECCCCCcc---ccccceEEEC--CEEEEEcCccC----------CCCcccceEEEEeCCCCCEeECCCCCCcc
Confidence 999998887543322 1223444443 78888432100 0001124699999998888765421111
Q ss_pred -cceeEEecCCCEEEEEEcC------CCeEEEEEccCccccccceeeecCCCCCC---ceeeCCCCCEEEEeccCCCccc
Q 019290 203 -PNGVALSNNNSFLLLAESA------TLKILRFWLQGERTTYTPQLFAEMPRFPD---NIKSDSKGEFWIAMNSARGKIE 272 (343)
Q Consensus 203 -~~~i~~~~d~~~lyv~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~p~---~i~~d~~G~lwi~~~~~~~~~~ 272 (343)
....+. .+ +.+|+..-. .+.+++||+.. .+...+...+. +. .+++ -+++||+.........
T Consensus 150 ~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~~~~p~-~r~~~~~~~-~~~~iyv~GG~~~~~~- 220 (318)
T 2woz_A 150 YGHNVIS-HN-GMIYCLGGKTDDKKCTNRVFIYNPKK----GDWKDLAPMKT-PRSMFGVAI-HKGKIVIAGGVTEDGL- 220 (318)
T ss_dssp ESCEEEE-ET-TEEEEECCEESSSCBCCCEEEEETTT----TEEEEECCCSS-CCBSCEEEE-ETTEEEEEEEEETTEE-
T ss_pred cccEEEE-EC-CEEEEEcCCCCCCCccceEEEEcCCC----CEEEECCCCCC-CcccceEEE-ECCEEEEEcCcCCCCc-
Confidence 122223 23 457775321 34689999765 22233322221 21 2222 3578888753211111
Q ss_pred cccccccccccCCCcccCCCeEEEECCCCCEEEEee-CCCCCccCCceeEEEeCCEEEEec
Q 019290 273 SNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD-GNEGNTLNSVSEVQEYGEYLYTGS 332 (343)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~i~~ 332 (343)
...+.+||++.+.-..+. .|.. .....+...+++||+-+
T Consensus 221 ------------------~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~~~~i~v~G 260 (318)
T 2woz_A 221 ------------------SASVEAFDLKTNKWEVMTEFPQE---RSSISLVSLAGSLYAIG 260 (318)
T ss_dssp ------------------EEEEEEEETTTCCEEECCCCSSC---CBSCEEEEETTEEEEEC
T ss_pred ------------------cceEEEEECCCCeEEECCCCCCc---ccceEEEEECCEEEEEC
Confidence 136788998654433332 2222 12223444588988653
No 317
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.14 E-value=0.099 Score=50.25 Aligned_cols=125 Identities=10% Similarity=0.012 Sum_probs=64.9
Q ss_pred CCeeEEEec-CCEEEEEEc-CCCCeE-EeeecCCCc-cccccCCCCCcccCCCcCCeeeEEEeCCCCe----EEEEeCCC
Q 019290 46 GEGPYVGVS-DGRILKWKA-ANSGWT-EFATTAPHR-AREICDGSTNTTLEPLCGRPLGIKFNPVTCD----LYIADAYF 117 (343)
Q Consensus 46 g~~l~~~~~-~g~i~~~d~-~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~----l~v~~~~~ 117 (343)
+..+|+... ++.|+.+|. .+++.. .+....... ....| .. ....++++.+.++. ||+++...
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~--------~~--~~~~g~av~p~~g~~~~rV~v~t~dg 131 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVAC--------CD--LVNRGLAYWPGDGKTPALILKTQLDG 131 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCS--------SC--SCCCCCEEECCCSSSCCEEEEECTTS
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCcccccccc--------cc--ccccceEEEecCCcceeEEEEEcCCC
Confidence 344888777 788999999 776532 221100000 00000 00 01235666322455 99996555
Q ss_pred eEEEEeCCCCeEEEcccccCCCC-ccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceE
Q 019290 118 GLMVVGPNGGQAQQLASSAGGIP-FRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVT 194 (343)
Q Consensus 118 gi~~~d~~~~~~~~~~~~~~~~~-~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 194 (343)
.|+.+|.++|+...-........ ......-++. +|.+|++.....+ ...+.|+.+|.++|+..
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~------------g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAEL------------GVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGG------------TCCCEEEEEETTTCCEE
T ss_pred EEEEEECCCCCEEEeecCCCCCccceeecCCEEE--CCEEEEEeccccc------------CCCCeEEEEECCCCcEE
Confidence 69999999998765432211000 0111222333 3788886542110 11457888888877754
No 318
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.10 E-value=0.12 Score=50.65 Aligned_cols=81 Identities=16% Similarity=0.286 Sum_probs=46.5
Q ss_pred ceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCC--CCCCceeeCCCC
Q 019290 181 GRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMP--RFPDNIKSDSKG 258 (343)
Q Consensus 181 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~G 258 (343)
+.|..+|+.+++..--........+-.+...+..+|+. +.++.|+.||..+...+- .+ ..+ ....-+....+|
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~lw---~~-~~~~~~~~~p~ty~~~G 529 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGEKLW---EQ-PAASGVMAAPVTYSVDG 529 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEE---EE-ECSSCCCSCCEEEEETT
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCccce---ee-eCCCCcccCceEEEECC
Confidence 67999999988865322211222333455566666665 678999999976522111 11 111 111224555689
Q ss_pred CEEEEecc
Q 019290 259 EFWIAMNS 266 (343)
Q Consensus 259 ~lwi~~~~ 266 (343)
+.||+...
T Consensus 530 ~qyv~~~~ 537 (689)
T 1yiq_A 530 EQYVTFMA 537 (689)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99988654
No 319
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.05 E-value=0.12 Score=50.46 Aligned_cols=83 Identities=16% Similarity=0.222 Sum_probs=45.8
Q ss_pred ceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCCceeeCCCCCE
Q 019290 181 GRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPDNIKSDSKGEF 260 (343)
Q Consensus 181 ~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 260 (343)
+.|+.+|+.+++..--........+..+...++.+|+. +.++.|+.++......+-+.+. .......-+....+|++
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~~l~~~~~--~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGEALWQFEA--QSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEEC--SSCCCSCCEEEEETTEE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhcChhheEecC--CCCcccCceEEEECCEE
Confidence 77999999988864322222223444444567777776 5689999999764221111111 00101122333457888
Q ss_pred EEEecc
Q 019290 261 WIAMNS 266 (343)
Q Consensus 261 wi~~~~ 266 (343)
|++...
T Consensus 515 yva~~~ 520 (668)
T 1kv9_A 515 YVAIMA 520 (668)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 887554
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.02 E-value=0.018 Score=47.60 Aligned_cols=143 Identities=14% Similarity=0.025 Sum_probs=82.4
Q ss_pred CeeeEEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEcccccC---CCCccCcceeEEeCCCCeEEEEeCCcccccccceee
Q 019290 97 RPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAG---GIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMS 173 (343)
Q Consensus 97 ~p~gi~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~---~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~ 173 (343)
....+++++ ++.||.+ ....|+++++.+++-..+..... ...-.....+.+|+ +|.||++.
T Consensus 42 ~~~~laf~P-~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav~------------- 105 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAVS------------- 105 (236)
T ss_dssp TCSEEEECT-TSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEEE-------------
T ss_pred cceeEEECC-CccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEeC-------------
Confidence 456899999 9999998 44569999986643333321100 00112356789999 59999973
Q ss_pred eeecCCCceEEEEeCCC-Cce------EEeec-CCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccc---cccceee
Q 019290 174 IATGDRSGRLLKYDPLK-KNV------TVMYN-GLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERT---TYTPQLF 242 (343)
Q Consensus 174 ~~~~~~~~~v~~~d~~~-~~~------~~~~~-~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~---~~~~~~~ 242 (343)
.+.|+|+++.+ +.- ..+-. +-.....+.++|+|. ||... ++.+++........ +.....+
T Consensus 106 ------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~ 176 (236)
T 1tl2_A 106 ------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQDNWLARATKI 176 (236)
T ss_dssp ------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTTCCHHHHCEEE
T ss_pred ------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCCccccccccee
Confidence 46899998743 111 11111 223457788889885 88876 56787744321110 0111111
Q ss_pred ec-CCCCCCceeeCCCCCEEEEe
Q 019290 243 AE-MPRFPDNIKSDSKGEFWIAM 264 (343)
Q Consensus 243 ~~-~~~~p~~i~~d~~G~lwi~~ 264 (343)
.. ....-.-+.++++|+||.++
T Consensus 177 g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 177 GQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp ESSSGGGEEEEEECTTSCEEEEE
T ss_pred ccCCcceEEEEEECCCCcEEEEe
Confidence 10 00001125688999999998
No 321
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.98 E-value=0.31 Score=47.61 Aligned_cols=113 Identities=13% Similarity=0.124 Sum_probs=65.2
Q ss_pred eeeEEEeCCCCeEEEEeC---C-CeEEEEeCCCC--eEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccce
Q 019290 98 PLGIKFNPVTCDLYIADA---Y-FGLMVVGPNGG--QAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYF 171 (343)
Q Consensus 98 p~gi~~~~~~~~l~v~~~---~-~gi~~~d~~~~--~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~ 171 (343)
..++.+++++..|++... . +.++.+|.+++ +++.+..... ..... +++.++.+|+....
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-----~~~~~-~~~~g~~l~~~t~~--------- 300 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-----ADVSL-VDNKGSTLYLLTNR--------- 300 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-----SCEEE-EEEETTEEEEEECT---------
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-----ceEEE-EeccCCEEEEEECC---------
Confidence 346778884555655532 1 36899998765 4554432211 11121 33323678876543
Q ss_pred eeeeecCCCceEEEEeCCCCce---EEeecCCCCcceeEEecCCCEEEEEEcCCC--eEEEEEccC
Q 019290 172 MSIATGDRSGRLLKYDPLKKNV---TVMYNGLSFPNGVALSNNNSFLLLAESATL--KILRFWLQG 232 (343)
Q Consensus 172 ~~~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~--~i~~~~~~~ 232 (343)
.....+|++++.+++.. +.+........ .++++++.|+++...++ +|+++++++
T Consensus 301 -----~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 301 -----DAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp -----TCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred -----CCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 11246799999876553 44443322222 77888888887765443 688888775
No 322
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.93 E-value=0.0078 Score=55.98 Aligned_cols=135 Identities=13% Similarity=0.162 Sum_probs=76.9
Q ss_pred cCcceeEEeCCCC--eEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce----EE----eecC-----CCCccee
Q 019290 142 RFTNDLDIDPNTG--IVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV----TV----MYNG-----LSFPNGV 206 (343)
Q Consensus 142 ~~~~~i~~d~~dg--~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~----~~----~~~~-----~~~~~~i 206 (343)
..|..|++.+ || +|||++. .++|++++.++... .. +..+ ....-++
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er------------------~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgi 74 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEK------------------EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSL 74 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEET------------------TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeC------------------CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceee
Confidence 5678999999 57 5999875 46788887653311 11 1111 2345789
Q ss_pred EEecC---CCEEEEEEcCC------------CeEEEEEccCc--cc--cccceeeecCC----C-CCCceeeCCCCCEEE
Q 019290 207 ALSNN---NSFLLLAESAT------------LKILRFWLQGE--RT--TYTPQLFAEMP----R-FPDNIKSDSKGEFWI 262 (343)
Q Consensus 207 ~~~~d---~~~lyv~~~~~------------~~i~~~~~~~~--~~--~~~~~~~~~~~----~-~p~~i~~d~~G~lwi 262 (343)
+++|+ .+.+|++.+.. .+|.+|.+... .. ..+.+++...+ . ....|++++||+|||
T Consensus 75 a~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv 154 (463)
T 2wg3_C 75 AFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYI 154 (463)
T ss_dssp EECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEE
T ss_pred EeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEE
Confidence 99986 45688875421 37888987632 11 12223333211 1 123388999999999
Q ss_pred EeccCCCccccccccccccccCCCcccCCCeEEEECCCCC
Q 019290 263 AMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGN 302 (343)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~ 302 (343)
+....+....... .........+.|+|++++|+
T Consensus 155 ~~Gd~~~~~~~~~-------~~q~~~~~~GkIlRi~~dg~ 187 (463)
T 2wg3_C 155 ILGDGMITLDDME-------EMDGLSDFTGSVLRLDVDTD 187 (463)
T ss_dssp EECCTTCCHHHHH-------HCTTCCSCTTEEEEEBCCCC
T ss_pred EeCCCCCCCCccc-------cccCcCCCCeeEEEEECCCC
Confidence 9876322110000 00000122578999999884
No 323
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.91 E-value=0.18 Score=44.72 Aligned_cols=154 Identities=17% Similarity=0.070 Sum_probs=84.5
Q ss_pred ceEEEcC---CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 38 ESLAFDC---NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 38 ~~l~~d~---~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
..+++.+ ++..+..+..++.|..||.++++......... ........+++++ ++.+.++.
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~----------------~~v~~v~~vafSp-dG~~lvs~ 244 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD----------------SYQASVCHKAYSE-MGLLFIVL 244 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-------------------CCCEEEEEEE-TTEEEEEE
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC----------------cceeeeEEEEECC-CCCEEEEe
Confidence 4556666 66767777899999999999876433221000 0111244567887 56554321
Q ss_pred C------------CCe-EEEEeCCCCeEEEccc--ccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCC
Q 019290 115 A------------YFG-LMVVGPNGGQAQQLAS--SAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDR 179 (343)
Q Consensus 115 ~------------~~g-i~~~d~~~~~~~~~~~--~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~ 179 (343)
. ..+ +..+|+++++...... ...+.... -+..+. ++.+.++-. .
T Consensus 245 s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~---~lsg~~-sg~~lASgS-----------------~ 303 (356)
T 2w18_A 245 SHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGR---FLEGDV-KDHCAAAIL-----------------T 303 (356)
T ss_dssp C------------CCEEEEEEETTTTEEEEEEEECCCTTCCCC---EEEEEE-ETTEEEEEE-----------------T
T ss_pred ccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcce---eEcccc-CCCEEEEEc-----------------C
Confidence 1 123 6677888876533211 01111101 111222 133334322 1
Q ss_pred CceEEEEeCCCCceEEeec-CCCCcc-eeEEecCCCEEEEEEcCCCeEEEEEc
Q 019290 180 SGRLLKYDPLKKNVTVMYN-GLSFPN-GVALSNNNSFLLLAESATLKILRFWL 230 (343)
Q Consensus 180 ~~~v~~~d~~~~~~~~~~~-~~~~~~-~i~~~~d~~~lyv~~~~~~~i~~~~~ 230 (343)
.+.|..+|..+++...... ...... .++|+|||+.|+ +.+.++.|..|++
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La-SGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL-AGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE-EECTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE-EEECCCcEEEecC
Confidence 4568889998887654333 223334 579999998655 5567899999874
No 324
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.83 E-value=0.016 Score=55.32 Aligned_cols=121 Identities=15% Similarity=0.229 Sum_probs=78.3
Q ss_pred CcCCeeeEEEeCCCCeEEEEeCC---------------------Ce-EEEEeCCCCe-----EE--Ecccc---------
Q 019290 94 LCGRPLGIKFNPVTCDLYIADAY---------------------FG-LMVVGPNGGQ-----AQ--QLASS--------- 135 (343)
Q Consensus 94 ~~~~p~gi~~~~~~~~l~v~~~~---------------------~g-i~~~d~~~~~-----~~--~~~~~--------- 135 (343)
.+.+|.++.+++.++.+|++.+. .| |++++++.+. ++ .+...
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 35578999999878899998542 13 8888764331 11 11100
Q ss_pred --------cCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCC--CCcce
Q 019290 136 --------AGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGL--SFPNG 205 (343)
Q Consensus 136 --------~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~ 205 (343)
.....+..|..|++|+ .|+|||.+.+......++ .......++.+++.++++.++.... ....|
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~-----~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG 535 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDF-----AGMGNNQMLCADPATGEIRRFMVGPIGCEVTG 535 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGG-----TTTCSCEEEEECTTTCCEEEEEECCTTCEEEE
T ss_pred ccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccc-----cccccceEEEEeCCCCeEEEEEeCCCCccCcC
Confidence 0112356788999999 599999986532111000 0112456888999889988876443 45689
Q ss_pred eEEecCCCEEEEEEc
Q 019290 206 VALSNNNSFLLLAES 220 (343)
Q Consensus 206 i~~~~d~~~lyv~~~ 220 (343)
++|+||+++||+.-.
T Consensus 536 ~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 536 ISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEECTTSSEEEEEEE
T ss_pred eeECCCCCEEEEEEE
Confidence 999999999988644
No 325
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=96.82 E-value=0.44 Score=46.93 Aligned_cols=125 Identities=17% Similarity=0.247 Sum_probs=74.0
Q ss_pred ccccccccCCCCC-CCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeee
Q 019290 23 SKSYQQLQLPGVV-GPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLG 100 (343)
Q Consensus 23 ~~~~~~~~~~~~~-~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 100 (343)
....+.+...+.. ...+|+++++ .+.+|+++..++|++.+..+..|+.+....... .........
T Consensus 10 ~~~w~~~~~~~~~g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~-------------~~~~~~i~~ 76 (737)
T 2cn3_A 10 PYKWDNVVIGGGGGFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMD-------------EYSYYGVES 76 (737)
T ss_dssp CEEEEEECCCSBCSCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGG-------------GGGGGCEEE
T ss_pred CCeeEEcccCCCcceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcc-------------cccCCCcce
Confidence 4456777766444 6789999986 345898887888999998888888763211000 001123567
Q ss_pred EEEeC-CCCeEEEEeC---------CCeEEEEeCCCCeEEEcccccC-C--CCc-cCcceeEEeCCC-CeEEEEe
Q 019290 101 IKFNP-VTCDLYIADA---------YFGLMVVGPNGGQAQQLASSAG-G--IPF-RFTNDLDIDPNT-GIVYFTD 160 (343)
Q Consensus 101 i~~~~-~~~~l~v~~~---------~~gi~~~d~~~~~~~~~~~~~~-~--~~~-~~~~~i~~d~~d-g~l~v~~ 160 (343)
|++++ +.+.+|++.. ..+|++-+=.+..++.+..... + .+. .....|+++|.+ +.+|++.
T Consensus 77 i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 77 IATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp EEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred EEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 88987 2468999853 1356665433334554422110 0 011 123679998743 5788865
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.81 E-value=0.15 Score=44.34 Aligned_cols=194 Identities=10% Similarity=0.029 Sum_probs=93.3
Q ss_pred eEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 109 DLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 109 ~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
.||+- .+..++.+|+.+++++. ..... +.......++-. ++.+|+.-.... ............+++||+
T Consensus 6 ~l~~~-GG~~~~~yd~~~~~W~~-~~~~~--p~~r~~~~~~~~-~~~iyv~GG~~~------~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 6 LIFMI-SEEGAVAYDPAANECYC-ASLSS--QVPKNHVSLVTK-ENQVFVAGGLFY------NEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp EEEEE-ETTEEEEEETTTTEEEE-EECCC--CSCSSEEEEECT-TCCEEEEEEEEE------CSSCSSSCEEEEEEEEET
T ss_pred EEEEE-cCCceEEECCCCCeEec-CCCCC--CCCccceEEEEE-CCEEEEEcCccc------CCCCCccccccceEEecC
Confidence 44544 24679999999998875 22211 111122223333 478887332000 000000000234899999
Q ss_pred CCCceEEeecCCCCc---ceeEEecCCCEEEEEEc--------CCCeEEEEEccCccccccceeeecCCCCCC--ceeeC
Q 019290 189 LKKNVTVMYNGLSFP---NGVALSNNNSFLLLAES--------ATLKILRFWLQGERTTYTPQLFAEMPRFPD--NIKSD 255 (343)
Q Consensus 189 ~~~~~~~~~~~~~~~---~~i~~~~d~~~lyv~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~--~i~~d 255 (343)
.+++.+.+.. +..+ .+++.. ++.+|+..- ..+.+++|++.. .+.+.....+. +. .-++-
T Consensus 75 ~~~~W~~~~~-~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~----~~W~~~~~~p~-~r~~~~~~~ 146 (315)
T 4asc_A 75 LDSEWLGMPP-LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLS----FKWGESDPLPY-VVYGHTVLS 146 (315)
T ss_dssp TTTEEEECCC-BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTT----TEEEECCCCSS-CCBSCEEEE
T ss_pred CCCeEEECCC-CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCC----CcEeECCCCCC-cccceeEEE
Confidence 9888776532 2221 223332 346777632 125688998765 22223222221 11 11222
Q ss_pred CCCCEEEEecc-CCCccccccccccccccCCCcccCCCeEEEECCCCCEEEEee-CCCCCccCCceeEEEeCCEEEEec-
Q 019290 256 SKGEFWIAMNS-ARGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD-GNEGNTLNSVSEVQEYGEYLYTGS- 332 (343)
Q Consensus 256 ~~G~lwi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~i~~- 332 (343)
-+++||+.... ..... ...+.+||+....-.... .|.. .....+...+++||+-+
T Consensus 147 ~~~~iyv~GG~~~~~~~-------------------~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~~~~iyv~GG 204 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKC-------------------LNKMCVYDPKKFEWKELAPMQTA---RSLFGATVHDGRIIVAAG 204 (315)
T ss_dssp ETTEEEEECCBCTTSCB-------------------CCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEEEE
T ss_pred ECCEEEEEeCCCCCCcc-------------------cceEEEEeCCCCeEEECCCCCCc---hhceEEEEECCEEEEEec
Confidence 45778887543 11111 347889998655433332 2222 22233344488888644
Q ss_pred CCC----CeEEEEcC
Q 019290 333 SVQ----PYVVVIKA 343 (343)
Q Consensus 333 ~~~----~~i~~~~~ 343 (343)
... +.+.+|++
T Consensus 205 ~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 205 VTDTGLTSSAEVYSI 219 (315)
T ss_dssp ECSSSEEEEEEEEET
T ss_pred cCCCCccceEEEEEC
Confidence 322 35666653
No 327
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.66 E-value=0.49 Score=45.25 Aligned_cols=82 Identities=13% Similarity=0.160 Sum_probs=45.2
Q ss_pred CceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCC--CCCceeeCCC
Q 019290 180 SGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPR--FPDNIKSDSK 257 (343)
Q Consensus 180 ~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~p~~i~~d~~ 257 (343)
.+.|+.+|+.+++..--........+-.+...++.+|+. +.++.|+.+|..+...+-+ + +.+. ...-++...+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-~~dg~l~A~D~~tG~~lW~---~-~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTG-TGDGYFKAFDAKSGKELWK---F-QTGSGIVSPPITWEQD 539 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEE-CTTSEEEEEETTTCCEEEE---E-ECSSCCCSCCEEEEET
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEE-CCCCcEEEEECCCCCEEEE---e-cCCCCcccCceEEEEC
Confidence 577999999988764211111112222222345666664 5678999999764221111 1 1221 1122555578
Q ss_pred CCEEEEecc
Q 019290 258 GEFWIAMNS 266 (343)
Q Consensus 258 G~lwi~~~~ 266 (343)
|+.||+...
T Consensus 540 G~qYv~~~~ 548 (582)
T 1flg_A 540 GEQYLGVTV 548 (582)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEc
Confidence 999998765
No 328
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.56 E-value=0.32 Score=41.82 Aligned_cols=191 Identities=11% Similarity=0.073 Sum_probs=102.0
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC------CeEEEEeCCCCeE
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY------FGLMVVGPNGGQA 129 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~------~gi~~~d~~~~~~ 129 (343)
..+++||+.+.+|..+...+ .....++++.. ++.||+.... +.++++|+.+.++
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMR------------------DRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp CCEEEEETTTTEEEEECCCS------------------SCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred cceEEECCCCCceeeCCCCC------------------ccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeE
Confidence 35899999999998874211 11112445554 5677775321 2488999999998
Q ss_pred EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC--cceeE
Q 019290 130 QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF--PNGVA 207 (343)
Q Consensus 130 ~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~i~ 207 (343)
+.+...... ..-..+++. ++.||+....... .......+++||+.+.+.+.+...... ....+
T Consensus 137 ~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~----------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 201 (302)
T 2xn4_A 137 FHVAPMNTR---RSSVGVGVV--GGLLYAVGGYDVA----------SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG 201 (302)
T ss_dssp EEECCCSSC---CBSCEEEEE--TTEEEEECCEETT----------TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred eecCCCCCc---ccCceEEEE--CCEEEEEeCCCCC----------CCccccEEEEEeCCCCcEEECCCCccccccccEE
Confidence 887543322 122334443 3789884321000 000134699999998887765322111 12233
Q ss_pred EecCCCEEEEEEcC-----CCeEEEEEccCccccccceeeecCCC--CCCceeeCCCCCEEEEeccCCCccccccccccc
Q 019290 208 LSNNNSFLLLAESA-----TLKILRFWLQGERTTYTPQLFAEMPR--FPDNIKSDSKGEFWIAMNSARGKIESNKKTAFC 280 (343)
Q Consensus 208 ~~~d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~--~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~ 280 (343)
.. + +.+|+..-. .+.+++||+.. .....+...+. .-..++. -+|+||+.....+...
T Consensus 202 ~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~----~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~--------- 265 (302)
T 2xn4_A 202 VL-N-NLLYAVGGHDGPLVRKSVEVYDPTT----NAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCN--------- 265 (302)
T ss_dssp EE-T-TEEEEECCBSSSSBCCCEEEEETTT----TEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSB---------
T ss_pred EE-C-CEEEEECCCCCCcccceEEEEeCCC----CCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcc---------
Confidence 32 3 457776421 35799999765 22233322221 1112222 2677888754312111
Q ss_pred cccCCCcccCCCeEEEECCCCCEEEEe
Q 019290 281 EETAKPWFLRDPVGVKFDVNGNVVDVL 307 (343)
Q Consensus 281 ~~~~~~~~~~~~~v~~~d~~g~~~~~~ 307 (343)
...+.+||++...-..+
T Consensus 266 ----------~~~v~~yd~~~~~W~~~ 282 (302)
T 2xn4_A 266 ----------LASVEYYNPTTDKWTVV 282 (302)
T ss_dssp ----------CCCEEEEETTTTEEEEC
T ss_pred ----------cccEEEEcCCCCeEEEC
Confidence 24688999976654444
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.47 E-value=0.29 Score=42.53 Aligned_cols=194 Identities=10% Similarity=0.027 Sum_probs=92.8
Q ss_pred eEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeC
Q 019290 109 DLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDP 188 (343)
Q Consensus 109 ~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 188 (343)
.||+. .+..+..||+.++++... ......+ ..-+.+ +-. ++.+|+.-....- ...........+++||+
T Consensus 17 ~i~~~-GG~~~~~yd~~~~~W~~~-~~~~~~~-r~~~~~-~~~-~~~lyv~GG~~~~------~~~~~~~~~~~~~~~d~ 85 (318)
T 2woz_A 17 LILLV-NDTAAVAYDPMENECYLT-ALAEQIP-RNHSSI-VTQ-QNQVYVVGGLYVD------EENKDQPLQSYFFQLDN 85 (318)
T ss_dssp EEEEE-CSSEEEEEETTTTEEEEE-EECTTSC-SSEEEE-ECS-SSCEEEEESSCC-------------CCCBEEEEEET
T ss_pred hhhhc-cccceEEECCCCCceecc-cCCccCC-ccceEE-EEE-CCEEEEECCcccC------ccccCCCccccEEEEeC
Confidence 56665 356799999999988763 2211111 112233 334 4788874321000 00000000224899999
Q ss_pred CCCceEEeecCCC--CcceeEEecCCCEEEEEEcC-------CCeEEEEEccCccccccceeeecCCC--CCCceeeCCC
Q 019290 189 LKKNVTVMYNGLS--FPNGVALSNNNSFLLLAESA-------TLKILRFWLQGERTTYTPQLFAEMPR--FPDNIKSDSK 257 (343)
Q Consensus 189 ~~~~~~~~~~~~~--~~~~i~~~~d~~~lyv~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~--~p~~i~~d~~ 257 (343)
.+++.+.+..... ...+.+.. ++.+|+..-. ...+++||+.. .+.+.+...+. .-...+. -+
T Consensus 86 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~----~~W~~~~~~p~~r~~~~~~~-~~ 158 (318)
T 2woz_A 86 VSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVA----AKWSEVKNLPIKVYGHNVIS-HN 158 (318)
T ss_dssp TTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTT----TEEEEECCCSSCEESCEEEE-ET
T ss_pred CCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCC----CCEeECCCCCCcccccEEEE-EC
Confidence 9888876532111 11233332 3457775321 14588888765 23333222221 0112233 46
Q ss_pred CCEEEEeccC-CCccccccccccccccCCCcccCCCeEEEECCCCCEEEEee-CCCCCccCCceeEEEeCCEEEEecC-C
Q 019290 258 GEFWIAMNSA-RGKIESNKKTAFCEETAKPWFLRDPVGVKFDVNGNVVDVLD-GNEGNTLNSVSEVQEYGEYLYTGSS-V 334 (343)
Q Consensus 258 G~lwi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~i~~~-~ 334 (343)
|+||+..... .... ...+.+||+....-.... .|.. .....+...+++||+-+- .
T Consensus 159 ~~iyv~GG~~~~~~~-------------------~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~~~~iyv~GG~~ 216 (318)
T 2woz_A 159 GMIYCLGGKTDDKKC-------------------TNRVFIYNPKKGDWKDLAPMKTP---RSMFGVAIHKGKIVIAGGVT 216 (318)
T ss_dssp TEEEEECCEESSSCB-------------------CCCEEEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEEEEEE
T ss_pred CEEEEEcCCCCCCCc-------------------cceEEEEcCCCCEEEECCCCCCC---cccceEEEECCEEEEEcCcC
Confidence 7888865321 1111 247889998655433332 2222 122233445888886542 2
Q ss_pred ----CCeEEEEc
Q 019290 335 ----QPYVVVIK 342 (343)
Q Consensus 335 ----~~~i~~~~ 342 (343)
.+.+.+|+
T Consensus 217 ~~~~~~~~~~yd 228 (318)
T 2woz_A 217 EDGLSASVEAFD 228 (318)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCccceEEEEE
Confidence 23455555
No 330
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.20 E-value=0.57 Score=45.35 Aligned_cols=115 Identities=10% Similarity=0.090 Sum_probs=69.3
Q ss_pred eeeEEEeCCCCeEEEEeCC------------CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCccc
Q 019290 98 PLGIKFNPVTCDLYIADAY------------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYF 165 (343)
Q Consensus 98 p~gi~~~~~~~~l~v~~~~------------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~ 165 (343)
+++.++.+.++.||+.... ..+.+||+.+++++.+...... ...+..++++.. +|+||+.-..
T Consensus 188 ~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~-~~~~~~~~~~~~-~g~lyv~GG~--- 262 (656)
T 1k3i_A 188 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK-HDMFCPGISMDG-NGQIVVTGGN--- 262 (656)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS-CCCSSCEEEECT-TSCEEEECSS---
T ss_pred ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC-CCCccccccCCC-CCCEEEeCCC---
Confidence 4566776546778776211 1378999999887765433221 123445667777 5899985432
Q ss_pred ccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC---cceeEEecCCCEEEEEEc-C-----CCeEEEEEccC
Q 019290 166 QRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF---PNGVALSNNNSFLLLAES-A-----TLKILRFWLQG 232 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~i~~~~d~~~lyv~~~-~-----~~~i~~~~~~~ 232 (343)
....+++||+.+++.+.+.. +.. ....++.++++ +|+..- . ...+++||+..
T Consensus 263 -------------~~~~v~~yd~~t~~W~~~~~-~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 263 -------------DAKKTSLYDSSSDSWIPGPD-MQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp -------------STTCEEEEEGGGTEEEECCC-CSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTT
T ss_pred -------------CCCceEEecCcCCceeECCC-CCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCC
Confidence 12369999998887776532 221 22344555665 666542 1 15688999765
No 331
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.19 E-value=0.52 Score=40.38 Aligned_cols=137 Identities=16% Similarity=0.152 Sum_probs=78.8
Q ss_pred CEEEEEEcCCCC---eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC------CCeEEEEeCCC
Q 019290 56 GRILKWKAANSG---WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA------YFGLMVVGPNG 126 (343)
Q Consensus 56 g~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~------~~gi~~~d~~~ 126 (343)
..+++||+.+.. |..+...+ .....+.++.. ++.||+... .+.++++|+.+
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p------------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMN------------------VRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCS------------------SCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred ceEEEEECCCCCCCeeEECCCCC------------------CCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCC
Confidence 469999999888 88773211 11112344444 578888732 13589999999
Q ss_pred CeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCCc---
Q 019290 127 GQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFP--- 203 (343)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~--- 203 (343)
.+++.+...... ..-..+++. ++.+|+...... ......+++||+.+.+.+.+.. +..+
T Consensus 138 ~~W~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~ 199 (301)
T 2vpj_A 138 DQWSMLGDMQTA---REGAGLVVA--SGVIYCLGGYDG------------LNILNSVEKYDPHTGHWTNVTP-MATKRSG 199 (301)
T ss_dssp TEEEEEEECSSC---CBSCEEEEE--TTEEEEECCBCS------------SCBCCCEEEEETTTTEEEEECC-CSSCCBS
T ss_pred CeEEECCCCCCC---cccceEEEE--CCEEEEECCCCC------------CcccceEEEEeCCCCcEEeCCC-CCccccc
Confidence 988877543322 122333443 378888532100 0113569999999888876532 2211
Q ss_pred ceeEEecCCCEEEEEEcC-----CCeEEEEEccC
Q 019290 204 NGVALSNNNSFLLLAESA-----TLKILRFWLQG 232 (343)
Q Consensus 204 ~~i~~~~d~~~lyv~~~~-----~~~i~~~~~~~ 232 (343)
...+.. ++.+|+..-. ...+++|++..
T Consensus 200 ~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 200 AGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp CEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred ceEEEE--CCEEEEEeCCCCCcccceEEEEeCCC
Confidence 122222 3457776422 35789999765
No 332
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=96.19 E-value=1.2 Score=44.35 Aligned_cols=172 Identities=15% Similarity=0.119 Sum_probs=94.5
Q ss_pred cccccCCCCCCCceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEe
Q 019290 26 YQQLQLPGVVGPESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFN 104 (343)
Q Consensus 26 ~~~~~~~~~~~p~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~ 104 (343)
.+++.........+|++++. .+++|++...++|++-+..+..|..+..... . . .........|+++
T Consensus 6 W~~~~~~~~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~-~----------~--~~~~~~i~~ia~d 72 (789)
T 1sqj_A 6 FKNVAIGGGGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIE-A----------Q--DMNIMGTESIALD 72 (789)
T ss_dssp EEECCCCBCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCC-G----------G--GGGGCSEEEEEEE
T ss_pred ceEccCCCCCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCC-c----------c--cccCCceeEEEEC
Confidence 45555543336788999985 4568998888899999888878877532110 0 0 0012245788898
Q ss_pred CC-CCeEEEEeCC------CeEEEEeCCCCeEEEcccccC-C--CCc-cCcceeEEeCCC-CeEEEEeCCccccccccee
Q 019290 105 PV-TCDLYIADAY------FGLMVVGPNGGQAQQLASSAG-G--IPF-RFTNDLDIDPNT-GIVYFTDSSIYFQRRQYFM 172 (343)
Q Consensus 105 ~~-~~~l~v~~~~------~gi~~~d~~~~~~~~~~~~~~-~--~~~-~~~~~i~~d~~d-g~l~v~~~~~~~~~~~~~~ 172 (343)
+. .+.+|++... .+|++-+-.+..++.+..... . .+. ..+..+++++.+ +.+|++..
T Consensus 73 p~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~----------- 141 (789)
T 1sqj_A 73 PNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR----------- 141 (789)
T ss_dssp TTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS-----------
T ss_pred CCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec-----------
Confidence 73 2578888532 356665444445555432111 0 011 124578888732 46777542
Q ss_pred eeeecCCCceEEEEeCCCCceEEeecC------CCCcceeEEec-CCCEEEEEEcCCCeEEEE
Q 019290 173 SIATGDRSGRLLKYDPLKKNVTVMYNG------LSFPNGVALSN-NNSFLLLAESATLKILRF 228 (343)
Q Consensus 173 ~~~~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~~i~~~~-d~~~lyv~~~~~~~i~~~ 228 (343)
.++|++=+-.+...+.+... ......+++++ +.+.+|+.....+.|++=
T Consensus 142 -------~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S 197 (789)
T 1sqj_A 142 -------TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVT 197 (789)
T ss_dssp -------SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEEE
T ss_pred -------cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEE
Confidence 24577654333334443211 01234566666 345788875433667663
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.14 E-value=0.56 Score=40.30 Aligned_cols=189 Identities=9% Similarity=0.082 Sum_probs=99.9
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC-------CeEEEEeCCCCe
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY-------FGLMVVGPNGGQ 128 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~-------~gi~~~d~~~~~ 128 (343)
..+++||+.+.+|..+...+ ....-+.++.. ++.||+.... +.++++|+.+.+
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPP------------------TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp CEEEEEETTTTEEEEEECCS------------------SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred ceEEEEeCCCCeEEECCCCC------------------ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 57999999999888774211 11112344444 5778876321 248999999998
Q ss_pred EEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC--ccee
Q 019290 129 AQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF--PNGV 206 (343)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~i 206 (343)
++.+...... ..-+.++.. ++.+|+........ ........+++||+.+.+.+.+...... ....
T Consensus 130 W~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~~--------~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 196 (306)
T 3ii7_A 130 WHTKPSMLTQ---RCSHGMVEA--NGLIYVCGGSLGNN--------VSGRVLNSCEVYDPATETWTELCPMIEARKNHGL 196 (306)
T ss_dssp EEEECCCSSC---CBSCEEEEE--TTEEEEECCEESCT--------TTCEECCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred eEeCCCCcCC---cceeEEEEE--CCEEEEECCCCCCC--------CcccccceEEEeCCCCCeEEECCCccchhhcceE
Confidence 8877543322 122333433 37898843210000 0000034699999998888765422111 1223
Q ss_pred EEecCCCEEEEEEcC-----CCeEEEEEccCccccccceeeecCCC--CCCceeeCCCCCEEEEeccCCCcccccccccc
Q 019290 207 ALSNNNSFLLLAESA-----TLKILRFWLQGERTTYTPQLFAEMPR--FPDNIKSDSKGEFWIAMNSARGKIESNKKTAF 279 (343)
Q Consensus 207 ~~~~d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~--~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~ 279 (343)
++. ++.+|+..-. ...+++||+..+ ....+...+. .-...+.- +++||+.....+...
T Consensus 197 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~----~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~-------- 261 (306)
T 3ii7_A 197 VFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN----EWKMVSPMPWKGVTVKCAAV-GSIVYVLAGFQGVGR-------- 261 (306)
T ss_dssp EEE--TTEEEEECCEETTEEBCCEEEEETTTT----EEEECCCCSCCBSCCEEEEE-TTEEEEEECBCSSSB--------
T ss_pred EEE--CCEEEEEeCCCCCCCCceEEEeeCCCC----cEEECCCCCCCccceeEEEE-CCEEEEEeCcCCCee--------
Confidence 332 3457776311 256889997652 2223222221 11112222 677888754322211
Q ss_pred ccccCCCcccCCCeEEEECCCCCE
Q 019290 280 CEETAKPWFLRDPVGVKFDVNGNV 303 (343)
Q Consensus 280 ~~~~~~~~~~~~~~v~~~d~~g~~ 303 (343)
...+.+||++.+.
T Consensus 262 -----------~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 262 -----------LGHILEYNTETDK 274 (306)
T ss_dssp -----------CCEEEEEETTTTE
T ss_pred -----------eeeEEEEcCCCCe
Confidence 2478899986543
No 334
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.07 E-value=0.12 Score=49.42 Aligned_cols=126 Identities=18% Similarity=0.335 Sum_probs=75.3
Q ss_pred CCCCCceEEEcC-CCCeeEEEec---------------------CCEEEEEEcCCC-------CeEEeeecCC--Ccccc
Q 019290 33 GVVGPESLAFDC-NGEGPYVGVS---------------------DGRILKWKAANS-------GWTEFATTAP--HRARE 81 (343)
Q Consensus 33 ~~~~p~~l~~d~-~g~~l~~~~~---------------------~g~i~~~d~~~~-------~~~~~~~~~~--~~~~~ 81 (343)
.+..||++.+++ +|.++++.++ .|+|++|.+... .|..+..... .....
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 455799999997 5774444332 368999987532 1223322111 00000
Q ss_pred ccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC-------------CeEEEEeCCCCeEEEcccccCCCCccCcceeE
Q 019290 82 ICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY-------------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLD 148 (343)
Q Consensus 82 ~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~-------------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~ 148 (343)
...+.........+..|-.|++++ .++|||+... +.++.+++.++++++++....+ .-+.+++
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---aE~TG~~ 537 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---CEVTGIS 537 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT---CEEEEEE
T ss_pred ccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC---ccCcCee
Confidence 000111111123466799999998 8899999643 2378889999999888655433 3467889
Q ss_pred EeCCCCeEEEEeCC
Q 019290 149 IDPNTGIVYFTDSS 162 (343)
Q Consensus 149 ~d~~dg~l~v~~~~ 162 (343)
+.++...||+.-++
T Consensus 538 fspDg~tlfvniQH 551 (592)
T 3zwu_A 538 FSPDQKTLFVGIQH 551 (592)
T ss_dssp ECTTSSEEEEEEES
T ss_pred ECCCCCEEEEEEEC
Confidence 99943457775554
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.98 E-value=0.76 Score=40.47 Aligned_cols=161 Identities=15% Similarity=0.020 Sum_probs=82.4
Q ss_pred CCCeeE-EE-ecCCEEEEEEcCC--CCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC----
Q 019290 45 NGEGPY-VG-VSDGRILKWKAAN--SGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY---- 116 (343)
Q Consensus 45 ~g~~l~-~~-~~~g~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~---- 116 (343)
++. +| ++ .....+++||+.+ .+|..+...+ .....-++++.. ++.||+....
T Consensus 19 ~~~-iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p-----------------~~~R~~~~~~~~--~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 19 NDT-VYIGLGSAGTAWYKLDTQAKDKKWTALAAFP-----------------GGPRDQATSAFI--DGNLYVFGGIGKNS 78 (357)
T ss_dssp TTE-EEEECGGGTTCEEEEETTSSSCCEEECCCCT-----------------TCCCBSCEEEEE--TTEEEEECCEEECT
T ss_pred CCE-EEEEeCcCCCeEEEEccccCCCCeeECCCCC-----------------CCcCccceEEEE--CCEEEEEcCCCCCC
Confidence 555 55 43 3445799999974 7787764211 011112344444 5778875321
Q ss_pred -------CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccc-------------------
Q 019290 117 -------FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQY------------------- 170 (343)
Q Consensus 117 -------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~------------------- 170 (343)
+.+++||+.+.+++.+...... ...-..++. - ++.||+.-..........
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~~~~~~p~--~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVKLMSHAPM--GMAGHVTFV-H-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINA 154 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEECSCCCSS--CCSSEEEEE-E-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccceeeccEEEEeCCCCcEEECCCCCCc--ccccceEEE-E-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhh
Confidence 2389999999998887654311 122233444 4 478988543210000000
Q ss_pred ---eeeeeecCCCceEEEEeCCCCceEEeecCCC-Cc--ceeEEecCCCEEEEEEc------CCCeEEEEEcc
Q 019290 171 ---FMSIATGDRSGRLLKYDPLKKNVTVMYNGLS-FP--NGVALSNNNSFLLLAES------ATLKILRFWLQ 231 (343)
Q Consensus 171 ---~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~--~~i~~~~d~~~lyv~~~------~~~~i~~~~~~ 231 (343)
............+++||+.+.+.+.+..... .. .++++. ++.+|+..- ....+++|+++
T Consensus 155 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d 225 (357)
T 2uvk_A 155 HYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFT 225 (357)
T ss_dssp HHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC
T ss_pred hhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEec
Confidence 0000000012579999999888876543221 11 233332 345777631 13568888763
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.96 E-value=0.69 Score=39.86 Aligned_cols=185 Identities=12% Similarity=0.119 Sum_probs=100.2
Q ss_pred CEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC------CCeEEEEeCCCCeE
Q 019290 56 GRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA------YFGLMVVGPNGGQA 129 (343)
Q Consensus 56 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~------~~gi~~~d~~~~~~ 129 (343)
..+++||+.+.+|..+...+ ....-+.++.. ++.||+... .+.++++|+.+.++
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p------------------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMS------------------VPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp CCEEEEETTTTEEEECCCCS------------------SCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred ceEEEECCCCCeEeECCCCC------------------cCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 35899999998888764211 11112344444 578888732 13489999999998
Q ss_pred EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEEeecCCCC--cceeE
Q 019290 130 QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTVMYNGLSF--PNGVA 207 (343)
Q Consensus 130 ~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~i~ 207 (343)
+.+...... ..-..+++. ++.||+.-.... ......+++||+.+.+.+.+...... ....+
T Consensus 150 ~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 212 (308)
T 1zgk_A 150 HLVAPMLTR---RIGVGVAVL--NRLLYAVGGFDG------------TNRLNSAECYYPERNEWRMITAMNTIRSGAGVC 212 (308)
T ss_dssp EECCCCSSC---CBSCEEEEE--TTEEEEECCBCS------------SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred eECCCCCcc---ccceEEEEE--CCEEEEEeCCCC------------CCcCceEEEEeCCCCeEeeCCCCCCccccceEE
Confidence 887543322 122334444 378888432100 01134699999998887765321111 12233
Q ss_pred EecCCCEEEEEEcC-----CCeEEEEEccCccccccceeeecCCC--CCCceeeCCCCCEEEEeccCCCccccccccccc
Q 019290 208 LSNNNSFLLLAESA-----TLKILRFWLQGERTTYTPQLFAEMPR--FPDNIKSDSKGEFWIAMNSARGKIESNKKTAFC 280 (343)
Q Consensus 208 ~~~d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~--~p~~i~~d~~G~lwi~~~~~~~~~~~~~~~~~~ 280 (343)
+. ++.+|+..-. ...+++||+..+ +...+...+. .-..+++ -+++||+.....+...
T Consensus 213 ~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~----~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~--------- 276 (308)
T 1zgk_A 213 VL--HNCIYAAGGYDGQDQLNSVERYDVETE----TWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTF--------- 276 (308)
T ss_dssp EE--TTEEEEECCBCSSSBCCCEEEEETTTT----EEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCB---------
T ss_pred EE--CCEEEEEeCCCCCCccceEEEEeCCCC----cEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcc---------
Confidence 32 3457776422 257999998752 2223222221 0112222 2577888754322211
Q ss_pred cccCCCcccCCCeEEEECCCCCE
Q 019290 281 EETAKPWFLRDPVGVKFDVNGNV 303 (343)
Q Consensus 281 ~~~~~~~~~~~~~v~~~d~~g~~ 303 (343)
...+.+||++.+.
T Consensus 277 ----------~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 277 ----------LDSVECYDPDTDT 289 (308)
T ss_dssp ----------CCEEEEEETTTTE
T ss_pred ----------cceEEEEcCCCCE
Confidence 2478899986544
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.67 E-value=1.8 Score=42.30 Aligned_cols=158 Identities=12% Similarity=0.081 Sum_probs=88.7
Q ss_pred CCCCeeEEEec----CCEEEEEEcCCCCeEEee-ecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCC--
Q 019290 44 CNGEGPYVGVS----DGRILKWKAANSGWTEFA-TTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAY-- 116 (343)
Q Consensus 44 ~~g~~l~~~~~----~g~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~-- 116 (343)
-++.++.++-. ...+++||+.+.+|..+. ..+... .+....-++++....++.||+....
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~-------------~p~~R~~hs~~~~~~~~~lyv~GG~~~ 462 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSE-------------VPVARMCHTFTTISRNNQLLLIGGRKA 462 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSC-------------CCCCCBSCEEEEETTTTEEEEECCBSS
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCC-------------CCccccceEEEEEccCCEEEEEcCCCC
Confidence 45564444432 245899999999998875 210000 0111112444444214678876321
Q ss_pred -----CeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCC
Q 019290 117 -----FGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKK 191 (343)
Q Consensus 117 -----~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 191 (343)
+.+++||+.+.+++.+...... ..-+..++-. ++.||+..... . ...+++||+.+.
T Consensus 463 ~~~~~~dv~~yd~~t~~W~~~~~~p~~---R~~h~~~~~~-~~~iyv~GG~~--------------~-~~~v~~yd~~t~ 523 (695)
T 2zwa_A 463 PHQGLSDNWIFDMKTREWSMIKSLSHT---RFRHSACSLP-DGNVLILGGVT--------------E-GPAMLLYNVTEE 523 (695)
T ss_dssp TTCBCCCCEEEETTTTEEEECCCCSBC---CBSCEEEECT-TSCEEEECCBC--------------S-SCSEEEEETTTT
T ss_pred CCCccccEEEEeCCCCcEEECCCCCCC---cccceEEEEc-CCEEEEECCCC--------------C-CCCEEEEECCCC
Confidence 3489999999988887543322 2234445434 38898843210 0 116999999988
Q ss_pred ceEEeecC--C----CCcceeEEecCCCEEEEEEcC-------CCeEEEEEccCc
Q 019290 192 NVTVMYNG--L----SFPNGVALSNNNSFLLLAESA-------TLKILRFWLQGE 233 (343)
Q Consensus 192 ~~~~~~~~--~----~~~~~i~~~~d~~~lyv~~~~-------~~~i~~~~~~~~ 233 (343)
.++.+... . .....+++..+.+.+|+..-. .+.+++|++..+
T Consensus 524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 88766531 1 112234445443568886422 356999998764
No 338
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=95.11 E-value=2.9 Score=41.32 Aligned_cols=175 Identities=17% Similarity=0.183 Sum_probs=91.9
Q ss_pred cccCCCCCCCceEEEcCCC-CeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCC
Q 019290 28 QLQLPGVVGPESLAFDCNG-EGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPV 106 (343)
Q Consensus 28 ~~~~~~~~~p~~l~~d~~g-~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~ 106 (343)
...+++.-...+|++++.+ +++|++...++|++-+..+..|..+....... .+ + .+ .........|++++.
T Consensus 14 ~~~~g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~--~~--~--~~--~~~~~~~~~ia~dp~ 85 (763)
T 3a0f_A 14 PVTISGGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINN--AL--A--GN--GANLLGTESIALDPH 85 (763)
T ss_dssp ECSCCBCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTT--CS--S--SC--CCCCCSEEEEECCTT
T ss_pred eeEecCCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCcccc--cc--C--CC--cccccceeEEEECCC
Confidence 3344432367899999875 57888888888999988887888764211000 00 0 00 001223567888873
Q ss_pred -CCeEEEEeC-------CCeEEEEeCCCCeEEEcccccC-C-C-Ccc-CcceeEEeCCC-CeEEEEeCCcccccccceee
Q 019290 107 -TCDLYIADA-------YFGLMVVGPNGGQAQQLASSAG-G-I-PFR-FTNDLDIDPNT-GIVYFTDSSIYFQRRQYFMS 173 (343)
Q Consensus 107 -~~~l~v~~~-------~~gi~~~d~~~~~~~~~~~~~~-~-~-~~~-~~~~i~~d~~d-g~l~v~~~~~~~~~~~~~~~ 173 (343)
.+.+|++.. ..+|++-+=....++.+..... + . ... ....+++++.+ +.+|++..
T Consensus 86 ~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------------ 153 (763)
T 3a0f_A 86 NPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR------------ 153 (763)
T ss_dssp CTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS------------
T ss_pred CCCEEEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC------------
Confidence 468898753 2446655433334554431110 0 0 001 12468888632 67888542
Q ss_pred eeecCCCceEEEEeCCCCceEEeecCCC-------CcceeEEecC-CCEEEEEEcCCCeEEEEE
Q 019290 174 IATGDRSGRLLKYDPLKKNVTVMYNGLS-------FPNGVALSNN-NSFLLLAESATLKILRFW 229 (343)
Q Consensus 174 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------~~~~i~~~~d-~~~lyv~~~~~~~i~~~~ 229 (343)
.+.|++=.-.+...+.+. .+. ....+++++. ...+|++....+.|++-+
T Consensus 154 ------~~~l~~S~DgG~TW~~~~-~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S~ 210 (763)
T 3a0f_A 154 ------TQGLWRSTDRAQTWSRMN-QLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWVTW 210 (763)
T ss_dssp ------SSCEEEESSTTSSCEECT-TSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEEES
T ss_pred ------CCcEEEECCCCcCccccc-cCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEEEC
Confidence 235775543333344332 111 1345667654 346888765333566543
No 339
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=94.19 E-value=2.8 Score=37.11 Aligned_cols=149 Identities=9% Similarity=-0.045 Sum_probs=73.8
Q ss_pred CCeEEEEeCCCe-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEE
Q 019290 107 TCDLYIADAYFG-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLK 185 (343)
Q Consensus 107 ~~~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 185 (343)
++.++++...++ |..+|+++|+.......... ....+..+++.| +|.+.++...... . -.+..+...+.|-.
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~-~v~~v~~vafSp-dG~~lvs~s~~~~-~----w~laSGs~D~tIkl 264 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS-YQASVCHKAYSE-MGLLFIVLSHPCA-K----ESESLRSPVFQLIV 264 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC----CCCEEEEEEE-TTEEEEEEC-----------------CCEEEEE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCc-ceeeeEEEEECC-CCCEEEEeccCCC-c----ceeeccCCCcEEEE
Confidence 445666544455 88899999875433221111 123456678899 5887765332100 0 00111222455667
Q ss_pred EeCCCCceEEee----cCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCccccccceeeecCCCCCC-ceeeCCCCCE
Q 019290 186 YDPLKKNVTVMY----NGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGERTTYTPQLFAEMPRFPD-NIKSDSKGEF 260 (343)
Q Consensus 186 ~d~~~~~~~~~~----~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~-~i~~d~~G~l 260 (343)
+|+.+++..... .......-+..+.++. +.++.+.++.|..||+..... ...+......+. .+++.++|++
T Consensus 265 Wd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~-~lASgS~DgTIkIWDl~tGk~---l~tL~gH~~~vvs~vafSPDG~~ 340 (356)
T 2w18_A 265 INPKTTLSVGVMLYCLPPGQAGRFLEGDVKDH-CAAAILTSGTIAIWDLLLGQC---TALLPPVSDQHWSFVKWSGTDSH 340 (356)
T ss_dssp EETTTTEEEEEEEECCCTTCCCCEEEEEEETT-EEEEEETTSCEEEEETTTCSE---EEEECCC--CCCCEEEECSSSSE
T ss_pred EECCCCEEEEEEEeeccCCCcceeEccccCCC-EEEEEcCCCcEEEEECCCCcE---EEEecCCCCCeEEEEEECCCCCE
Confidence 788877643221 1111111222222233 456666788999999875221 122211111123 3678999988
Q ss_pred EEEecc
Q 019290 261 WIAMNS 266 (343)
Q Consensus 261 wi~~~~ 266 (343)
.++...
T Consensus 341 LaSGS~ 346 (356)
T 2w18_A 341 LLAGQK 346 (356)
T ss_dssp EEEECT
T ss_pred EEEEEC
Confidence 777654
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.01 E-value=2.9 Score=36.59 Aligned_cols=81 Identities=15% Similarity=0.108 Sum_probs=44.6
Q ss_pred CCeEEEEeC--CCeEEEEeCCC--CeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCce
Q 019290 107 TCDLYIADA--YFGLMVVGPNG--GQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGR 182 (343)
Q Consensus 107 ~~~l~v~~~--~~gi~~~d~~~--~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 182 (343)
++.||+... .+.++++|+.+ .+++.+....... ..-..+++. ++.||+.-...... + ........
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~--R~~~~~~~~--~~~lyv~GG~~~~~--~-----~~~~~~~~ 87 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGP--RDQATSAFI--DGNLYVFGGIGKNS--E-----GLTQVFND 87 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCC--CBSCEEEEE--TTEEEEECCEEECT--T-----SCEEECCC
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCc--CccceEEEE--CCEEEEEcCCCCCC--C-----ccceeecc
Confidence 678888732 23599999974 6777765433111 122344444 37898843210000 0 00011346
Q ss_pred EEEEeCCCCceEEeec
Q 019290 183 LLKYDPLKKNVTVMYN 198 (343)
Q Consensus 183 v~~~d~~~~~~~~~~~ 198 (343)
+++||+.+.+.+.+..
T Consensus 88 v~~yd~~~~~W~~~~~ 103 (357)
T 2uvk_A 88 VHKYNPKTNSWVKLMS 103 (357)
T ss_dssp EEEEETTTTEEEECSC
T ss_pred EEEEeCCCCcEEECCC
Confidence 9999999888876543
No 341
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=93.74 E-value=3.5 Score=36.67 Aligned_cols=151 Identities=10% Similarity=-0.081 Sum_probs=79.0
Q ss_pred CCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC-------CCCeEEEEeCCC
Q 019290 45 NGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP-------VTCDLYIADAYF 117 (343)
Q Consensus 45 ~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~-------~~~~l~v~~~~~ 117 (343)
++..+.++..++.|..||.++++........ ......+.+..+++.+ .+++++++...+
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~--------------~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLG--------------GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEEC--------------TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeec--------------ccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 4444556777888888888776543321110 0112233567888864 134555543344
Q ss_pred e-EEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCe-EEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 118 G-LMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGI-VYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 118 g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~-l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
+ +..+|..++.......... ..+..+++.|. +. +.++... .+.|..||..+++...
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~----~~v~~v~~~p~-~~~~l~~~~~-----------------d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLS----SPGISVQFRPS-NPNQLIVGER-----------------NGNIRIFDWTLNLSAE 223 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECS----SCEEEEEEETT-EEEEEEEEET-----------------TSEEEEEETTCCC---
T ss_pred CeEEEEECCCCceeeeecCCC----CCcEEEEECCC-CCceEEecCC-----------------CCEEEEEECCCCcccc
Confidence 4 8888876554322111111 34678899984 53 4443322 3456666665443211
Q ss_pred ee--------------------------cCCCCcceeEEe-cCCCEEEEEEcCCCeEEEEEccC
Q 019290 196 MY--------------------------NGLSFPNGVALS-NNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 196 ~~--------------------------~~~~~~~~i~~~-~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.. ........+.+. +|++.++ +...++.+..|++..
T Consensus 224 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~-s~s~d~~i~vwd~~~ 286 (393)
T 4gq1_A 224 ENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGIL-AMCKSGAWLRWNLFA 286 (393)
T ss_dssp -------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEE-EECTTSEEEEEEC--
T ss_pred cccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEE-EEeCCCCEEEEECcc
Confidence 00 011223455665 6777654 456788999998764
No 342
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=93.46 E-value=3.7 Score=36.88 Aligned_cols=153 Identities=8% Similarity=-0.023 Sum_probs=85.1
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeC
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADA 115 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~ 115 (343)
....|++.+++.+++++..+ ++..++.+.-. ..+..... + . .. ........ +..+++ . +..|+++ .
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~-~~~~~~~~----~-~-~~--~~~~~lp~-V~~l~f-d-~~~L~v~-~ 104 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLR-DHITSDST----P-L-TF--KWEKEIPD-VIFVCF-H-GDQVLVS-T 104 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHH-HHHHSSSC----C-C-CC--SEEEECTT-EEEEEE-E-TTEEEEE-E
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhh-hhhccccc----c-c-cc--eEEeeCCC-eeEEEE-C-CCEEEEE-c
Confidence 57889999999977777665 46667643211 00000000 0 0 00 00011223 788899 4 7889998 4
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCceEE
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNVTV 195 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 195 (343)
..+|..||..+-.......... ..++++..-+ .++.+.+. .|.|+.+|.+++....
T Consensus 105 ~~~l~v~dv~sl~~~~~~~~~~----~~v~~i~~~~--p~~av~~~------------------dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 105 RNALYSLDLEELSEFRTVTSFE----KPVFQLKNVN--NTLVILNS------------------VNDLSALDLRTKSTKQ 160 (388)
T ss_dssp SSEEEEEESSSTTCEEEEEECS----SCEEEEEECS--SEEEEEET------------------TSEEEEEETTTCCEEE
T ss_pred CCcEEEEEchhhhccCccceee----cceeeEEecC--CCEEEEEC------------------CCCEEEEEccCCcccc
Confidence 5679999975432111101111 1134444443 23444332 4678888887666544
Q ss_pred eecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 196 MYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 196 ~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
+. .....++++++| +.+. ..++.+..|++++
T Consensus 161 ~~---~~Vs~v~WSpkG--~~vg-~~dg~i~~~~~~~ 191 (388)
T 1xip_A 161 LA---QNVTSFDVTNSQ--LAVL-LKDRSFQSFAWRN 191 (388)
T ss_dssp EE---ESEEEEEECSSE--EEEE-ETTSCEEEEEEET
T ss_pred cc---CCceEEEEcCCc--eEEE-EcCCcEEEEcCCC
Confidence 32 457789999988 4443 4578899998776
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.28 E-value=8.9 Score=37.32 Aligned_cols=164 Identities=9% Similarity=0.068 Sum_probs=87.4
Q ss_pred ceEEEcC-CCCeeEEEec------CCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 38 ESLAFDC-NGEGPYVGVS------DGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 38 ~~l~~d~-~g~~l~~~~~------~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
++++.-. +|.++.++-. ...+++||+.+..|..+...+ ....-++.+... ++.|
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p------------------~~R~~h~~~~~~-~~~i 503 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLS------------------HTRFRHSACSLP-DGNV 503 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCS------------------BCCBSCEEEECT-TSCE
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCC------------------CCcccceEEEEc-CCEE
Confidence 4555554 6664445421 235899999998888763211 111224455533 6788
Q ss_pred EEEeCCC---eEEEEeCCCCeEEEcccccCCCCccCcce-eEEeCCCCeEEEEeCCcccccccceeeeeec-CCCceEEE
Q 019290 111 YIADAYF---GLMVVGPNGGQAQQLASSAGGIPFRFTND-LDIDPNTGIVYFTDSSIYFQRRQYFMSIATG-DRSGRLLK 185 (343)
Q Consensus 111 ~v~~~~~---gi~~~d~~~~~~~~~~~~~~~~~~~~~~~-i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 185 (343)
|+..... .+++||+.+.+++.+...........-+. ++++..++.+|+...... .+ .....+++
T Consensus 504 yv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~-----------~~~~~~~~v~~ 572 (695)
T 2zwa_A 504 LILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFM-----------DQTTVSDKAII 572 (695)
T ss_dssp EEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCT-----------TSSCBCCEEEE
T ss_pred EEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCC-----------CCCeeeCcEEE
Confidence 8873221 49999999999887754211111112233 455652378998542100 00 11356999
Q ss_pred EeCCCCc------eEEeecC--CC-CcceeEEecCCCEEEEEEc--------CCCeEEEEEccC
Q 019290 186 YDPLKKN------VTVMYNG--LS-FPNGVALSNNNSFLLLAES--------ATLKILRFWLQG 232 (343)
Q Consensus 186 ~d~~~~~------~~~~~~~--~~-~~~~i~~~~d~~~lyv~~~--------~~~~i~~~~~~~ 232 (343)
||+.+.. ++.+... .. .....++..+ +.+|+..- ....+++||+..
T Consensus 573 yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 573 FKYDAENATEPITVIKKLQHPLFQRYGSQIKYITP-RKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp EEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEET-TEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred EEccCCccccceEEEEcCCCCCCCcccceEEEeCC-CEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 9998777 5544331 11 1123333322 35676532 135688888765
No 344
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.09 E-value=0.16 Score=45.54 Aligned_cols=51 Identities=8% Similarity=0.017 Sum_probs=25.8
Q ss_pred CceEEEEeCCCCceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 180 SGRLLKYDPLKKNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 180 ~~~v~~~d~~~~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
.+.|+.+|.++|+...-... .......+..++. +|++.+.++.|+.+|..+
T Consensus 18 dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 18 DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp TSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC----
T ss_pred CCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECCC
Confidence 35799999888876432222 2222222333443 566666788999998753
No 345
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=91.45 E-value=11 Score=36.87 Aligned_cols=114 Identities=11% Similarity=0.084 Sum_probs=64.7
Q ss_pred eeEEEe-CCCCeEEEEeCCC-----eEEEEeCCCC-eEEEcccccCCCCccCcceeEEeCCCC-eEEEEeCCcccccccc
Q 019290 99 LGIKFN-PVTCDLYIADAYF-----GLMVVGPNGG-QAQQLASSAGGIPFRFTNDLDIDPNTG-IVYFTDSSIYFQRRQY 170 (343)
Q Consensus 99 ~gi~~~-~~~~~l~v~~~~~-----gi~~~d~~~~-~~~~~~~~~~~~~~~~~~~i~~d~~dg-~l~v~~~~~~~~~~~~ 170 (343)
.+..++ +++..|.++.... .|+++|++++ +. +..... ....+++..+ || .|+++....
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~~~~----~~~~~~~Wsp-Dg~~l~y~~~d~------- 242 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IADKVS----GTNGEIVWGP-DHTSLFYVTKDE------- 242 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCCCEE----EECSCCEECS-STTEEEEEEECT-------
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCcccc----CceeeEEEec-CCCEEEEEEECC-------
Confidence 457788 7444555443222 3999999988 52 111110 1134678888 45 566653210
Q ss_pred eeeeeecCCCceEEEEeCCCCce--EEee--cCCCCcceeEEecCCCEEEEEEc--CCCeEEEEEccC
Q 019290 171 FMSIATGDRSGRLLKYDPLKKNV--TVMY--NGLSFPNGVALSNNNSFLLLAES--ATLKILRFWLQG 232 (343)
Q Consensus 171 ~~~~~~~~~~~~v~~~d~~~~~~--~~~~--~~~~~~~~i~~~~d~~~lyv~~~--~~~~i~~~~~~~ 232 (343)
......||+++..++.. ..+. .+.....+..+++||+.|+++.. ....|+.+++++
T Consensus 243 ------~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 243 ------TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp ------TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred ------CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 01123688888876542 1222 12223456789999998887653 246788888875
No 346
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=87.04 E-value=24 Score=34.50 Aligned_cols=124 Identities=17% Similarity=0.108 Sum_probs=70.1
Q ss_pred CeeeEEEeCCC-CeEEEEeCCCeEEEEeCCCCeEEEcccccCCC--CccCcceeEEeCC-CCeEEEEeCCccccccccee
Q 019290 97 RPLGIKFNPVT-CDLYIADAYFGLMVVGPNGGQAQQLASSAGGI--PFRFTNDLDIDPN-TGIVYFTDSSIYFQRRQYFM 172 (343)
Q Consensus 97 ~p~gi~~~~~~-~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~--~~~~~~~i~~d~~-dg~l~v~~~~~~~~~~~~~~ 172 (343)
++.+|++++.+ +.+|++....+|++.+-.+..++.+....... ....+..|++|+. .+.+|++....... +
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~---~-- 98 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTND---W-- 98 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSS---S--
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccc---c--
Confidence 57789998733 68999854567999987766777764321111 1234778999973 26899876420000 0
Q ss_pred eeeecCCCceEEEEeCCCCceEEeecCCC---------CcceeEEecC-CCEEEEEEcCCCeEEEEE
Q 019290 173 SIATGDRSGRLLKYDPLKKNVTVMYNGLS---------FPNGVALSNN-NSFLLLAESATLKILRFW 229 (343)
Q Consensus 173 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---------~~~~i~~~~d-~~~lyv~~~~~~~i~~~~ 229 (343)
.....+|++=.-.+...+.+..... ....++++|. .+.+|+....+..|++-+
T Consensus 99 ----~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~ 161 (737)
T 2cn3_A 99 ----LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRST 161 (737)
T ss_dssp ----SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEES
T ss_pred ----ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeC
Confidence 0012457765433334444332111 1257888874 456777642236777643
No 347
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=82.00 E-value=41 Score=33.02 Aligned_cols=163 Identities=11% Similarity=0.006 Sum_probs=84.6
Q ss_pred ceEEEcCC-CCeeEEEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeC-CCCeEEEEeC
Q 019290 38 ESLAFDCN-GEGPYVGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNP-VTCDLYIADA 115 (343)
Q Consensus 38 ~~l~~d~~-g~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~-~~~~l~v~~~ 115 (343)
..|+.++. .+.+|++ .++.||+-...+..|+.+.... +.......-+.+.+ ..+.||++..
T Consensus 591 ~~i~~d~~~~~~~y~g-~~g~v~~S~DgG~tW~~~~~~l----------------p~~~~~~~~i~~~~~~~~~l~~~~~ 653 (763)
T 3a0f_A 591 TGIAADRVQANTFYVY-VEGDFFVSTDGGKSYTKKGNGL----------------PCCWTYTGTPVTSNLRAGELWVSVK 653 (763)
T ss_dssp SCEEECSSSTTCEEEE-ETTEEEEESSTTSBCEEECBTS----------------CCSSCCCEEEEECSSSTTCEEEEET
T ss_pred ceEEEeccCCCEEEEE-cCCCEEEEeCCCcCccccccCC----------------CcccCccccEEECCCCCCcEEEEcC
Confidence 57888874 4557877 5777887665566777763211 00000111155554 3678999975
Q ss_pred CCeEEEEeCCCCeEEEcccccCCCCcc--CcceeEEe-CCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCc
Q 019290 116 YFGLMVVGPNGGQAQQLASSAGGIPFR--FTNDLDID-PNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKN 192 (343)
Q Consensus 116 ~~gi~~~d~~~~~~~~~~~~~~~~~~~--~~~~i~~d-~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 192 (343)
..+|++-+-....++.+...... ... ...+++.. .....+|+.... .....++||+-+-.+..
T Consensus 654 ~~~l~~S~D~G~tW~~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~G~~-------------~~~~~~gl~~S~D~G~t 719 (763)
T 3a0f_A 654 GVGIYHSTDFGNTFTALAGSGSS-LNPAVFSIGAPQTPNATETLFLWGIP-------------SASQPEGLYMSTDNGGL 719 (763)
T ss_dssp TTEEEEESSTTSBCEECTTBTTT-BEEEEEEEECCSSTTSSCEEEEEEEC-------------STTSCSEEEEESSTTSC
T ss_pred CCeEEEEcCCCCCceEccCCCcc-cccceeEEeeecCCCCCceEEEEEEc-------------ccCCCcEEEEeCCCCCC
Confidence 56788775444456665421111 000 00122222 212578874300 00114568877655455
Q ss_pred eEEeec---CCCCcceeEEecCC-CEEEEEEcCCCeEEEEEccC
Q 019290 193 VTVMYN---GLSFPNGVALSNNN-SFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 193 ~~~~~~---~~~~~~~i~~~~d~-~~lyv~~~~~~~i~~~~~~~ 232 (343)
.+.+.. .+..+..+++++.. ..||++. .+..|+.-++.+
T Consensus 720 W~~~~~~~~~~~~~~~i~~~p~~~~~v~~~T-~GrGi~~g~~~~ 762 (763)
T 3a0f_A 720 WTRLNDDAHNYGGATVISGDPRIYGRVYIGM-NGRGIICAQALG 762 (763)
T ss_dssp CEECSCTTCCTBCEEEEEECTTSTTEEEEEE-BSSCEEEEESCC
T ss_pred cEeccCccccCCCcceEEeCCCCCCEEEEeC-CCCeEEEEecCC
Confidence 665542 22333367777643 4588764 466787766543
No 348
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=81.72 E-value=29 Score=31.05 Aligned_cols=130 Identities=12% Similarity=0.086 Sum_probs=77.9
Q ss_pred CCceEEEcCCCCeeEEEecCCEEEEEEcCCCCeE-EeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEe
Q 019290 36 GPESLAFDCNGEGPYVGVSDGRILKWKAANSGWT-EFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIAD 114 (343)
Q Consensus 36 ~p~~l~~d~~g~~l~~~~~~g~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~ 114 (343)
++..|++ +++.++++ .++.|..||..+.... .... .......+...+ .++.+++
T Consensus 89 ~V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~--------------------~~~~v~~i~~~~--p~~av~~ 143 (388)
T 1xip_A 89 DVIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTS--------------------FEKPVFQLKNVN--NTLVILN 143 (388)
T ss_dssp TEEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEE--------------------CSSCEEEEEECS--SEEEEEE
T ss_pred CeeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccce--------------------eecceeeEEecC--CCEEEEE
Confidence 3889999 88888888 7889999997653311 1110 001133444443 2466665
Q ss_pred CCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCCCce-
Q 019290 115 AYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLKKNV- 193 (343)
Q Consensus 115 ~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~- 193 (343)
....|+.+|.+++....+. ..+..+++.++ | +.++.. .+.+..|++++++.
T Consensus 144 ~dG~L~v~dl~~~~~~~~~--------~~Vs~v~WSpk-G-~~vg~~------------------dg~i~~~~~~~~~~~ 195 (388)
T 1xip_A 144 SVNDLSALDLRTKSTKQLA--------QNVTSFDVTNS-Q-LAVLLK------------------DRSFQSFAWRNGEME 195 (388)
T ss_dssp TTSEEEEEETTTCCEEEEE--------ESEEEEEECSS-E-EEEEET------------------TSCEEEEEEETTEEE
T ss_pred CCCCEEEEEccCCcccccc--------CCceEEEEcCC-c-eEEEEc------------------CCcEEEEcCCCcccc
Confidence 4455999999877654321 35778999994 7 555332 34566667766663
Q ss_pred --EEee------c---CCCCcceeEEecCCCEEEEE
Q 019290 194 --TVMY------N---GLSFPNGVALSNNNSFLLLA 218 (343)
Q Consensus 194 --~~~~------~---~~~~~~~i~~~~d~~~lyv~ 218 (343)
.++. . +-..+.++.+.+++..+.+.
T Consensus 196 ~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 196 KQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred ccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 2331 1 22446678888777666543
No 349
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=81.05 E-value=43 Score=32.69 Aligned_cols=157 Identities=8% Similarity=0.011 Sum_probs=79.0
Q ss_pred ceEEEcCCCCeeEEEecC-----CEEEEEEcCCCCe--EEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeE
Q 019290 38 ESLAFDCNGEGPYVGVSD-----GRILKWKAANSGW--TEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDL 110 (343)
Q Consensus 38 ~~l~~d~~g~~l~~~~~~-----g~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l 110 (343)
.++++.+||+.+++...+ .+|++++..++.. ..+... .......++.+++++..|
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~------------------~~~~~~~~~~~SpDg~~l 285 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEE------------------HNPLFSAFMYKAADTNTL 285 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEEC------------------CCTTCEEEEEECTTSSEE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEec------------------CCCceEEEEEECCCCCEE
Confidence 478899998755543322 3688888766431 111100 011123466788855556
Q ss_pred EEEeC---CCeEEEEeCCCC--eE--EEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceE
Q 019290 111 YIADA---YFGLMVVGPNGG--QA--QQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRL 183 (343)
Q Consensus 111 ~v~~~---~~gi~~~d~~~~--~~--~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v 183 (343)
++... ...|+.+|.+++ +. +.+..... ....++.... ++.+|+..... .....+|
T Consensus 286 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~----~~~~s~~~~~-g~~l~~~t~~~-------------~a~~~~L 347 (751)
T 2xe4_A 286 CIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK----GVRYDVQMHG-TSHLVILTNEG-------------GAVNHKL 347 (751)
T ss_dssp EEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT----TCCEEEEEET-TTEEEEEECTT-------------TCTTCEE
T ss_pred EEEecCCCCceEEEEECCCCCCCceeEEeecCCC----CceEEEeeee-CCEEEEEeCCC-------------CCCCcEE
Confidence 66532 234899998765 34 44432211 1112222223 36777765431 0124579
Q ss_pred EEEeCCC-CceEE-eecCCCCcceeEEecCCCEEEEEEcCCC--eEEEEEc
Q 019290 184 LKYDPLK-KNVTV-MYNGLSFPNGVALSNNNSFLLLAESATL--KILRFWL 230 (343)
Q Consensus 184 ~~~d~~~-~~~~~-~~~~~~~~~~i~~~~d~~~lyv~~~~~~--~i~~~~~ 230 (343)
++++.++ ++.+. +........--.++..++.++++...++ .|+++++
T Consensus 348 ~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 348 LIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 9998764 34333 3322221111123345667877655443 5777775
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=78.70 E-value=7.2 Score=34.26 Aligned_cols=28 Identities=7% Similarity=0.300 Sum_probs=21.6
Q ss_pred CCCCEEEEeccCCCccccccccccccccCCCcccCCCeEEEECC-CCCEEEEee
Q 019290 256 SKGEFWIAMNSARGKIESNKKTAFCEETAKPWFLRDPVGVKFDV-NGNVVDVLD 308 (343)
Q Consensus 256 ~~G~lwi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~-~g~~~~~~~ 308 (343)
.+|.+|++... +.++.+|. +|+++-.+.
T Consensus 110 ~~g~Vy~Gs~~-------------------------g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 110 EDEKVYTGSMR-------------------------TIMYTINMLNGEIISAFG 138 (339)
T ss_dssp CCEEEEECEEE-------------------------EEEEEEETTTCCEEEEES
T ss_pred cCCEEEEEecC-------------------------CEEEEEECCCCcEEEEEe
Confidence 57888988776 57888986 688877765
No 351
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=73.78 E-value=72 Score=31.40 Aligned_cols=121 Identities=16% Similarity=0.127 Sum_probs=68.2
Q ss_pred CCeeeEEEeCC-CCeEEEEeCCCeEEEEeCCCCeEEEcccccCCC--CccCcceeEEeCCC-CeEEEEeCCcccccccce
Q 019290 96 GRPLGIKFNPV-TCDLYIADAYFGLMVVGPNGGQAQQLASSAGGI--PFRFTNDLDIDPNT-GIVYFTDSSIYFQRRQYF 171 (343)
Q Consensus 96 ~~p~gi~~~~~-~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~--~~~~~~~i~~d~~d-g~l~v~~~~~~~~~~~~~ 171 (343)
++..+|++++. .+.+|++....+|++-+-.+..++.+....... ....+..|++|+.+ +.+|++.....
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~------- 87 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYV------- 87 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCT-------
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccC-------
Confidence 46778999873 367899865667988876656677754321100 12357889999732 56888653200
Q ss_pred eeeeecCCCceEEEEeCCCCceEEeecCCC---------CcceeEEecC-CCEEEEEEcCCCeEEEEE
Q 019290 172 MSIATGDRSGRLLKYDPLKKNVTVMYNGLS---------FPNGVALSNN-NSFLLLAESATLKILRFW 229 (343)
Q Consensus 172 ~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---------~~~~i~~~~d-~~~lyv~~~~~~~i~~~~ 229 (343)
....+.|++=+-.+...+.+..... ....+++++. .+.+|+.. ..+.|++-+
T Consensus 88 -----~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~S~ 149 (789)
T 1sqj_A 88 -----GDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWKSS 149 (789)
T ss_dssp -----TSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEEES
T ss_pred -----CCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-ccCCEEEEC
Confidence 0001567766434334444332111 1246888764 34566653 356777643
No 352
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=71.71 E-value=20 Score=31.40 Aligned_cols=28 Identities=25% Similarity=0.106 Sum_probs=21.2
Q ss_pred CCeEEEEeCCCeEEEEeCCCCeEEEccc
Q 019290 107 TCDLYIADAYFGLMVVGPNGGQAQQLAS 134 (343)
Q Consensus 107 ~~~l~v~~~~~gi~~~d~~~~~~~~~~~ 134 (343)
++.+|+++....|+.+|.++|+..+-..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~ 37 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIE 37 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 4678888655559999999998776543
No 353
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=70.15 E-value=72 Score=30.87 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=51.9
Q ss_pred CeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCC-CeEEEEeCCcccccccceeeeeecCCCceEEEE
Q 019290 108 CDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNT-GIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKY 186 (343)
Q Consensus 108 ~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~d-g~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 186 (343)
..+|......||++-+-.+..++.+..............|+++|.+ +++|++..... ....++||+=
T Consensus 56 ~~~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~------------~~~~g~v~rS 123 (685)
T 3f6k_A 56 PLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSG------------GSRGGRIFRS 123 (685)
T ss_dssp CC-----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCT------------TCSSCEEEEE
T ss_pred CceEEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccC------------CCCCceEEEE
Confidence 3444443345688776555567776533222222335689999843 36887653200 0114567766
Q ss_pred eCCCCceEEeecCCCCcceeEEecCC-CEEEEEEcCCCeEEEE
Q 019290 187 DPLKKNVTVMYNGLSFPNGVALSNNN-SFLLLAESATLKILRF 228 (343)
Q Consensus 187 d~~~~~~~~~~~~~~~~~~i~~~~d~-~~lyv~~~~~~~i~~~ 228 (343)
.-.+..++.+.........++++|.. +.+|+.. ..+.|++=
T Consensus 124 ~DgG~TW~~~~~p~~~~~~l~~~P~~~~~l~a~~-~~~gly~S 165 (685)
T 3f6k_A 124 SDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALS-TENGLWVS 165 (685)
T ss_dssp SSTTSSCEEEECSSCBSSCCEEETTEEEEEEEEB-TTCCEEEE
T ss_pred CCCCceeEeccCCCCCceEEEEecCCCCEEEEEE-CCCCEEEE
Confidence 53434444433222212256777643 3345443 34566663
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=69.22 E-value=21 Score=33.70 Aligned_cols=107 Identities=7% Similarity=0.005 Sum_probs=61.7
Q ss_pred cCcceeEEeCCCCeEEEEeCCcccccccceeeeeecCCCceEEEEeCCC------Cce-------EEeecCCCCcceeEE
Q 019290 142 RFTNDLDIDPNTGIVYFTDSSIYFQRRQYFMSIATGDRSGRLLKYDPLK------KNV-------TVMYNGLSFPNGVAL 208 (343)
Q Consensus 142 ~~~~~i~~d~~dg~l~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~------~~~-------~~~~~~~~~~~~i~~ 208 (343)
.+|+++-++| ||+..+.... ....+..+|.+. +++ .....-...|-=.+|
T Consensus 323 ksPHGv~vsP-DGkyi~v~GK----------------LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~F 385 (638)
T 3sbq_A 323 KNPHGCNTSS-DGKYFIAAGK----------------LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTF 385 (638)
T ss_dssp SSCCCEEECT-TSCEEEEECT----------------TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEE
T ss_pred CCCcceeeCC-CCCEEEEcCC----------------CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEE
Confidence 5689999999 5876654432 134566555431 111 111122345777889
Q ss_pred ecCCCEEEEEEcCCCeEEEEEccCccc--ccc-c-eeeecC-----CC---CCCceeeCCCCCEEEEecc
Q 019290 209 SNNNSFLLLAESATLKILRFWLQGERT--TYT-P-QLFAEM-----PR---FPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 209 ~~d~~~lyv~~~~~~~i~~~~~~~~~~--~~~-~-~~~~~~-----~~---~p~~i~~d~~G~lwi~~~~ 266 (343)
+++| ..|.+-..+++|.+|+++..-. -++ . .++-++ ++ .+.+-..+++|+.+++.+.
T Consensus 386 d~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 386 DGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp CSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred CCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 9888 7899988899999999864200 001 0 111111 11 1233355889988888764
No 355
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=65.69 E-value=1.3e+02 Score=31.16 Aligned_cols=165 Identities=14% Similarity=0.073 Sum_probs=89.1
Q ss_pred ccccccCCCCCCCceEEEc---CC-CCeeEEEe----------cCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcc
Q 019290 25 SYQQLQLPGVVGPESLAFD---CN-GEGPYVGV----------SDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTT 90 (343)
Q Consensus 25 ~~~~~~~~~~~~p~~l~~d---~~-g~~l~~~~----------~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (343)
.+..+++.....+.+++.- .+ ...+.+++ ..|+|+.|+-..+++..+...
T Consensus 819 ~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~---------------- 882 (1158)
T 3ei3_A 819 VLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEK---------------- 882 (1158)
T ss_dssp EEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEE----------------
T ss_pred EEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEE----------------
Confidence 3455666655556666642 22 34455554 357788877655455444210
Q ss_pred cCCCcCCeeeEEEeCCCCeEEEEeCCCeEEEEeCCCCeEEEcccccCCCCccCcceeEEeCCCCeEEEEeCCcccccccc
Q 019290 91 LEPLCGRPLGIKFNPVTCDLYIADAYFGLMVVGPNGGQAQQLASSAGGIPFRFTNDLDIDPNTGIVYFTDSSIYFQRRQY 170 (343)
Q Consensus 91 ~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~dg~l~v~~~~~~~~~~~~ 170 (343)
...+.+..++-- +|.|.++ -+..++.++....+.-.. ... ..+...+..+.... ++++++|...
T Consensus 883 --~v~g~v~al~~~--~g~Lla~-ig~~l~vy~l~~~~~L~~-~~~-~~~~i~~~~l~~~~--~~I~vgD~~~------- 946 (1158)
T 3ei3_A 883 --EVKGAVYSMVEF--NGKLLAS-INSTVRLYEWTTEKELRT-ECN-HYNNIMALYLKTKG--DFILVGDLMR------- 946 (1158)
T ss_dssp --EESSCEEEEEEE--TTEEEEE-ETTEEEEEEECTTSCEEE-EEE-ECCCSCEEEEEEET--TEEEEEESSB-------
T ss_pred --EcCCcCEEEeee--CCEEEEE-cCCEEEEEECCCCceEEE-Eee-ccccEEEEEEeccC--CEEEEEEhhh-------
Confidence 112345666666 4688887 467788888764431111 110 00001122444433 7899988642
Q ss_pred eeeeeecCCCceEEEEeCCCCceEEeecCCCCc--ceeEEecCCCEEEEEEcCCCeEEEEEccC
Q 019290 171 FMSIATGDRSGRLLKYDPLKKNVTVMYNGLSFP--NGVALSNNNSFLLLAESATLKILRFWLQG 232 (343)
Q Consensus 171 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~--~~i~~~~d~~~lyv~~~~~~~i~~~~~~~ 232 (343)
+-.+++|++..+++..+..+.... ...++-.+ ..+.+++ ..+.|+.+..+.
T Consensus 947 ---------Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD-~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 947 ---------SVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAE-NAFNLFVCQKDS 999 (1158)
T ss_dssp ---------CEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEE-TTSEEEEEEECT
T ss_pred ---------eEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEc-CCCcEEEEecCC
Confidence 345778888777777766554432 33333323 4455555 567788877654
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=63.94 E-value=32 Score=32.53 Aligned_cols=85 Identities=13% Similarity=0.089 Sum_probs=55.8
Q ss_pred eEEEEeCCC-----CceEEeecCCCCcceeEEecCCCEEEEEEcCCCeEEEEEccCc-----ccc--ccceeeec--CCC
Q 019290 182 RLLKYDPLK-----KNVTVMYNGLSFPNGVALSNNNSFLLLAESATLKILRFWLQGE-----RTT--YTPQLFAE--MPR 247 (343)
Q Consensus 182 ~v~~~d~~~-----~~~~~~~~~~~~~~~i~~~~d~~~lyv~~~~~~~i~~~~~~~~-----~~~--~~~~~~~~--~~~ 247 (343)
+|-.+|... .....+..-...|-|+.++|||++++++.-....+.+++...- ..+ .+-.+..+ ..-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466677653 1344455556779999999999999999988999999997631 000 11111222 111
Q ss_pred CCCceeeCCCCCEEEEecc
Q 019290 248 FPDNIKSDSKGEFWIAMNS 266 (343)
Q Consensus 248 ~p~~i~~d~~G~lwi~~~~ 266 (343)
-|--.++|.+|+.|.+..-
T Consensus 379 GPlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp CEEEEEECSSSEEEEEETT
T ss_pred cccEEEECCCCceEeeeee
Confidence 2556789999999988754
No 357
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=50.58 E-value=81 Score=27.87 Aligned_cols=72 Identities=13% Similarity=0.205 Sum_probs=47.2
Q ss_pred cCCCEEEEEEcCCC--eEEEEEccCccccccceeeecCCCCCCc-------eeeCCCCCEEEEeccCCCccccccccccc
Q 019290 210 NNNSFLLLAESATL--KILRFWLQGERTTYTPQLFAEMPRFPDN-------IKSDSKGEFWIAMNSARGKIESNKKTAFC 280 (343)
Q Consensus 210 ~d~~~lyv~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~p~~-------i~~d~~G~lwi~~~~~~~~~~~~~~~~~~ 280 (343)
.+.+.||..+.... .|..+|++.... .+ ++..+..| |+| +-+-..+.||+.+..
T Consensus 37 ~~k~yL~~~N~~~~~~~i~~iDL~~~kl-~k-~i~~ekEG-PNgi~~~~~~~~i~~~DsI~i~~~~-------------- 99 (369)
T 3s9j_A 37 NGKEYLHFENTQKSLYDIVIFDIENQQI-AK-RIPLHKTG-PNGLPAVFGSRPSPDSQYILVAQNN-------------- 99 (369)
T ss_dssp TTEEEEEEEECSTTCCEEEEEETTTTEE-EE-EEECBSSS-TTBCTTCCCEEESSSTTSEEEEEGG--------------
T ss_pred CCcEEEEEeCCCCCcCcEEEEECCCCce-ee-eeccccCC-CCCcccceeeEEecCCCEEEEEeCC--------------
Confidence 34457888887777 999999986332 11 11122233 333 334467789999876
Q ss_pred cccCCCcccCCCeEEEECCCCCEEEEee
Q 019290 281 EETAKPWFLRDPVGVKFDVNGNVVDVLD 308 (343)
Q Consensus 281 ~~~~~~~~~~~~~v~~~d~~g~~~~~~~ 308 (343)
..+|+.+|.+|+.+..+.
T Consensus 100 ----------~~~i~l~n~~G~~~~k~~ 117 (369)
T 3s9j_A 100 ----------ISRLSSINSQGEIIRNYN 117 (369)
T ss_dssp ----------GTEEEEECTTCCEEEEEE
T ss_pred ----------cceEEEECCCceEEEEEe
Confidence 348899999999877763
No 358
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=30.10 E-value=3.8e+02 Score=25.82 Aligned_cols=89 Identities=6% Similarity=0.100 Sum_probs=45.7
Q ss_pred EEecCCEEEEEEcCCCCeEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCC-CeEEEEeC------CCeEEEEe
Q 019290 51 VGVSDGRILKWKAANSGWTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVT-CDLYIADA------YFGLMVVG 123 (343)
Q Consensus 51 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~-~~l~v~~~------~~gi~~~d 123 (343)
+.+..++||+-+..+..|..+...... ........|++++.+ +++|++.. ..+|++-+
T Consensus 60 ~~t~~ggvyrS~DgG~TW~~v~~~~~~---------------~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~ 124 (685)
T 3f6k_A 60 MTFGQSKLYRSEDYGKNFKDITDLINN---------------TFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSS 124 (685)
T ss_dssp ---CEEEEEEESSTTSSCEECGGGGTT---------------CCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEEEES
T ss_pred EeecCCeEEEEeCCCCCceECcCCCCC---------------CcccceeEEEECCCCCCEEEEEEeccCCCCCceEEEEC
Confidence 334457899988778888876421100 011123468888743 37888754 34566655
Q ss_pred CCCCeEEEcccccCCCCccCcceeEEeCCC-CeEEEE
Q 019290 124 PNGGQAQQLASSAGGIPFRFTNDLDIDPNT-GIVYFT 159 (343)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~i~~d~~d-g~l~v~ 159 (343)
=.+..++.+.. . ......++++|.+ +.+|++
T Consensus 125 DgG~TW~~~~~-p----~~~~~~l~~~P~~~~~l~a~ 156 (685)
T 3f6k_A 125 DFAKNFVQTDL-P----FHPLTQMMYSPQNSDYLLAL 156 (685)
T ss_dssp STTSSCEEEEC-S----SCBSSCCEEETTEEEEEEEE
T ss_pred CCCceeEeccC-C----CCCceEEEEecCCCCEEEEE
Confidence 33334554421 1 1111367888742 345553
No 359
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=27.28 E-value=1.8e+02 Score=27.09 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=40.8
Q ss_pred EEEcC--CCCeeEEEecCCEEEEEEcCCCC-e-EEeeecCCCccccccCCCCCcccCCCcCCe-eeEEEeCCCCeEEEEe
Q 019290 40 LAFDC--NGEGPYVGVSDGRILKWKAANSG-W-TEFATTAPHRAREICDGSTNTTLEPLCGRP-LGIKFNPVTCDLYIAD 114 (343)
Q Consensus 40 l~~d~--~g~~l~~~~~~g~i~~~d~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~gi~~~~~~~~l~v~~ 114 (343)
|+.+. +-+++|+++.+|+|.++...... . ..+.... .......+ ..|.+++.++.||++
T Consensus 405 vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~---------------v~~~~~pv~~~l~~~~~~~~Lyv~- 468 (539)
T 3al9_A 405 VASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVS---------------VFKDGSPILRDMAFSINQLYLYVM- 468 (539)
T ss_dssp EEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEE---------------CCTTCCCCCSCCEECTTSSEEEEE-
T ss_pred EEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEE---------------eecCCCccccceEEccCCCeEEEE-
Confidence 44443 33467899999999998653221 1 1121100 00111122 368888867789999
Q ss_pred CCCeEEEEeCC
Q 019290 115 AYFGLMVVGPN 125 (343)
Q Consensus 115 ~~~gi~~~d~~ 125 (343)
+..+|.++...
T Consensus 469 s~~~V~kvpl~ 479 (539)
T 3al9_A 469 SERQVTRVPVE 479 (539)
T ss_dssp CSSEEEEEESC
T ss_pred eccccceeehh
Confidence 57888888765
No 360
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=24.94 E-value=1.4e+02 Score=20.94 Aligned_cols=23 Identities=13% Similarity=0.120 Sum_probs=17.5
Q ss_pred CCeEEEEeCCCeEEEEeCCCCeEE
Q 019290 107 TCDLYIADAYFGLMVVGPNGGQAQ 130 (343)
Q Consensus 107 ~~~l~v~~~~~gi~~~d~~~~~~~ 130 (343)
...||++....| ++|+...+++.
T Consensus 57 ~~QIWlaSp~sG-~hfd~~~~~Wi 79 (106)
T 1ew4_A 57 LHQVWLATKQGG-YHFDLKGDEWI 79 (106)
T ss_dssp TTEEEEECSSCE-EEEEEETTEEE
T ss_pred hhhheEecCCCc-eeeeecCCEEE
Confidence 678999976677 88888766643
No 361
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=20.77 E-value=5.4e+02 Score=24.29 Aligned_cols=64 Identities=13% Similarity=0.100 Sum_probs=38.3
Q ss_pred CeeEEEecCCEEEEEEcCCCC----eEEeeecCCCccccccCCCCCcccCCCcCCeeeEEEeCCCCeEEEEeCCCeEEEE
Q 019290 47 EGPYVGVSDGRILKWKAANSG----WTEFATTAPHRAREICDGSTNTTLEPLCGRPLGIKFNPVTCDLYIADAYFGLMVV 122 (343)
Q Consensus 47 ~~l~~~~~~g~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gi~~~~~~~~l~v~~~~~gi~~~ 122 (343)
+++|+++.+|+|.++-..... ...+..... .........|.+++..+.||++ +..+|.++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~---------------~~~~~pi~~L~ls~~~~~LyV~-s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQP---------------FRRAAAIQTMSLDAERRKLYVS-SQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECC---------------CSSCCCCCEEEEETTTTEEEEE-CSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeec---------------cCCCCceeeEEEcCCCCEEEEE-ecceEEEc
Confidence 467889999999987543211 111110000 0111224678888867889998 57889988
Q ss_pred eCCC
Q 019290 123 GPNG 126 (343)
Q Consensus 123 d~~~ 126 (343)
....
T Consensus 445 Pl~~ 448 (590)
T 3nvq_A 445 PLDL 448 (590)
T ss_dssp ETTC
T ss_pred chhh
Confidence 7753
No 362
>3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A*
Probab=20.22 E-value=48 Score=30.23 Aligned_cols=15 Identities=40% Similarity=0.425 Sum_probs=0.0
Q ss_pred CcccceeeEEeeeec
Q 019290 1 MKLLSSFIIFIFPLV 15 (343)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (343)
||++++|+++++++.
T Consensus 23 mkk~~~l~~~l~l~~ 37 (453)
T 3hun_A 23 MKNLISIIIILCLTL 37 (453)
T ss_dssp ---------------
T ss_pred HHHHHHHHHHHHHHH
Confidence 556555555444443
Done!