BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019291
(343 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 549 bits (1414), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/344 (77%), Positives = 306/344 (88%), Gaps = 2/344 (0%)
Query: 1 MAEMVSNKQVILKNYVSGFPKETDMYVTTSLIELKVPKGSNGVLLKNLYLSCDPYMRPRM 60
MAE VSNKQVILKNYV+G+PKE+DM + I+LKVP+GSN V++KNLYLSCDPYMR RM
Sbjct: 1 MAEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRM 60
Query: 61 TKDMEGSYIESFEPGLPISGNGVAKVLDSENPEFKKGDLVWGMTGWEEYSLIT-SPYLFK 119
K +EGSY+ESF PG PI+G GVAKVL+S +P+F+KGDLVWGMTGWEEYS+IT + LFK
Sbjct: 61 RK-IEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFK 119
Query: 120 VPHADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC 179
+ DVPLSYYTGILGMPGMTAYAGF+EVCSPK+GE VF+SAASGAVGQLVGQFAK+LGC
Sbjct: 120 IHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGC 179
Query: 180 YVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAV 239
YVVGSAGSK+KVDLLK++ GFDEAFNYKEE DL+AAL R FP+GIDIYFENVGGKMLDAV
Sbjct: 180 YVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAV 239
Query: 240 LINMKVGGRIAVCGMISQYNLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMII 299
L+NMK+ GRIAVCGMISQYNL++ EGVHNL LI+KR+RMEGFLV DY HLYPK+LEM+I
Sbjct: 240 LVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVI 299
Query: 300 PYIKGGKIVYVEDTAEGLESAPAALVGLFSGRNLGKQVVAVASE 343
P IK GK+VYVED A GLESAP ALVGLFSGRN+GKQVV V+ E
Sbjct: 300 PQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 493 bits (1268), Expect = e-140, Method: Compositional matrix adjust.
Identities = 233/342 (68%), Positives = 284/342 (83%), Gaps = 4/342 (1%)
Query: 6 SNKQVILKNYVSGFPKETDMYVTTSLIELKVPKGSNGVLLKNLYLSCDPYMRPRMTKD-- 63
+NKQVILK+YVSGFP E+D TT+ +EL+VP+G+N VL+KNLYLSCDPYMR RM K
Sbjct: 4 TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDP 63
Query: 64 MEGSYIESFEPGLPISGNGVAKVLDSENPEFKKGDLVWGMTGWEEYSLIT--SPYLFKVP 121
+ +++ PG PI G GV+++++S +P++KKGDL+WG+ WEEYS+IT + FK+
Sbjct: 64 STAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQ 123
Query: 122 HADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 181
H DVPLSYYTG+LGMPGMTAYAGFYEVCSPK+GE V++SAASGAVGQLVGQ AK++GCYV
Sbjct: 124 HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYV 183
Query: 182 VGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLI 241
VGSAGSK+KVDLLK + GFD+AFNYKEE DL AAL RCFP GIDIYFENVGGKMLDAVL+
Sbjct: 184 VGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLV 243
Query: 242 NMKVGGRIAVCGMISQYNLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMIIPY 301
NM + GRIAVCGMISQYNL+ EGVHNL+ +I KR R++GF+VSD+ Y KFLE ++P+
Sbjct: 244 NMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPH 303
Query: 302 IKGGKIVYVEDTAEGLESAPAALVGLFSGRNLGKQVVAVASE 343
I+ GKI YVED A+GLE AP ALVGLF G+N+GKQVV VA E
Sbjct: 304 IREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 188/336 (55%), Gaps = 9/336 (2%)
Query: 7 NKQVILKNYVSGFP-KETDMYVTTSLIELKVPKGSNGVLLKNLYLSCDPYMRPRMTKDME 65
N+Q L SG P ++T +V T L E +L+KN YLS DP MR M
Sbjct: 8 NRQYQLAQRPSGLPGRDTFSFVETPLGE----PAEGQILVKNEYLSLDPAMRGWMNDAR- 62
Query: 66 GSYIESFEPGLPISGNGVAKVLDSENPEFKKGDLVWGMTGWEEYSLITSPYLFKVPHADV 125
SYI G + GV KVL S++P F+ GD V G G ++Y + +KV +
Sbjct: 63 -SYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRA 121
Query: 126 PLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSA 185
PL Y LGM GMTAY +V PK GE V IS A+GAVG + GQ A+L GC VVG A
Sbjct: 122 PLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIA 181
Query: 186 GSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKV 245
G +K L LGFD A +YK E DL A L R P+GID++F+NVGG++LD VL +
Sbjct: 182 GGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAF 240
Query: 246 GGRIAVCGMISQYNLDEP-EGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKG 304
RI +CG ISQYN E G N L+ R RMEG +V DY +P+ L+ + ++
Sbjct: 241 KARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAE 300
Query: 305 GKIVYVEDTAEGLESAPAALVGLFSGRNLGKQVVAV 340
GK+ ED EGLE+ P L+ LFSG N GK V+ V
Sbjct: 301 GKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 230 bits (587), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 200/341 (58%), Gaps = 20/341 (5%)
Query: 4 MVSNKQVILKNYVSGFPKETDMYVTTSLIELKVPKGSNG-VLLKNLYLSCDPYMRPRMTK 62
MV K LK + G P ++D + T +++P NG VLL+ L+LS DPYMR +
Sbjct: 5 MVKAKSWTLKKHFQGKPTQSDFELKT----VELPPLKNGEVLLEALFLSVDPYMRIASKR 60
Query: 63 DMEGSYIESFEPGLPISGNGVAKVLDSENPEFKKGDLVWGMTGWEEYSLITSPYLFKVPH 122
EG+ + G VA+V++S+N F G +V +GW + + L K+
Sbjct: 61 LKEGAVM---------MGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLT 111
Query: 123 A---DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC 179
+PLS G +GMPG+TAY G EVC K GE V +SAA+GAVG +VGQ AKL GC
Sbjct: 112 EWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC 171
Query: 180 YVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAV 239
VVG+AGS +K+ LK ++GFD AFNYK L AL + P+G D YF+NVGG+ L+ V
Sbjct: 172 KVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTV 230
Query: 240 LINMKVGGRIAVCGMISQYN-LDEPEGVHNLTRLISKRVRMEGFLVSDYN-HLYPKFLEM 297
L MK G+IA+CG IS YN +D+ + +I K++R+EGF+V + + K L
Sbjct: 231 LSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRD 290
Query: 298 IIPYIKGGKIVYVEDTAEGLESAPAALVGLFSGRNLGKQVV 338
++ ++ GKI Y E +G E+ PAA + + +G NLGK VV
Sbjct: 291 LMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 217 bits (553), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 188/338 (55%), Gaps = 20/338 (5%)
Query: 7 NKQVILKNYVSGFPKETDMYVTTSLIELKVPKGSNG-VLLKNLYLSCDPYMRPRMTKDME 65
K LK + G+P +D + TS ++P NG VLL+ L+L+ DPYMR + E
Sbjct: 24 TKTWTLKKHFVGYPTNSDFELKTS----ELPPLKNGEVLLEALFLTVDPYMRVAAKRLKE 79
Query: 66 GSYIESFEPGLPISGNGVAKVLDSENPEFKKGDLVWGMTGWEEYSLITSPYLFKVPHA-- 123
G + G VAKV++S+N KG +V GW +S+ L K+
Sbjct: 80 GD---------TMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWP 130
Query: 124 -DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 182
+PLS G +GMPG+TAY G E+C K GE V ++AA+GAVG +VGQ AKL GC VV
Sbjct: 131 DTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVV 190
Query: 183 GSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLIN 242
G+ GS +KV L+ +LGFD FNYK L L + P+G D YF+NVGG+ + V+
Sbjct: 191 GAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQ 249
Query: 243 MKVGGRIAVCGMISQYNLDEPEGVHNLTRL-ISKRVRMEGFLVSDYN-HLYPKFLEMIIP 300
MK GRIA+CG IS YN P + I + +RME F+V + K L+ ++
Sbjct: 250 MKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLK 309
Query: 301 YIKGGKIVYVEDTAEGLESAPAALVGLFSGRNLGKQVV 338
++ GKI Y E EG E+ PAA +G+ G NLGK +V
Sbjct: 310 WVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 347
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 188/338 (55%), Gaps = 20/338 (5%)
Query: 7 NKQVILKNYVSGFPKETDMYVTTSLIELKVPKGSNG-VLLKNLYLSCDPYMRPRMTKDME 65
K LK + G+P +D + TS ++P NG VLL+ L+L+ DPYMR + E
Sbjct: 3 TKTWTLKKHFVGYPTNSDFELKTS----ELPPLKNGEVLLEALFLTVDPYMRVAAKRLKE 58
Query: 66 GSYIESFEPGLPISGNGVAKVLDSENPEFKKGDLVWGMTGWEEYSLITSPYLFKVPHA-- 123
G + G VAKV++S+N KG +V GW +S+ L K+
Sbjct: 59 GD---------TMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWP 109
Query: 124 -DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 182
+PLS G +GMPG+TAY G E+C K GE V ++AA+GAVG +VGQ AKL GC VV
Sbjct: 110 DTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVV 169
Query: 183 GSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLIN 242
G+ GS +KV L+ +LGFD FNYK L L + P+G D YF+NVGG+ + V+
Sbjct: 170 GAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQ 228
Query: 243 MKVGGRIAVCGMISQYNLDEPEGVHNLTRL-ISKRVRMEGFLVSDYN-HLYPKFLEMIIP 300
MK GRIA+CG IS YN P + I + +RME F+V + K L+ ++
Sbjct: 229 MKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLK 288
Query: 301 YIKGGKIVYVEDTAEGLESAPAALVGLFSGRNLGKQVV 338
++ GKI Y E EG E+ PAA +G+ G NLGK +V
Sbjct: 289 WVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 326
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 163/313 (52%), Gaps = 15/313 (4%)
Query: 43 VLLKNLYLSCDPYMRPRMTKDMEGSYIESFEPGLPISGNGVAKVLDSENPEFKKGDLVWG 102
V ++ LYLS DPYMR RM +D YI ++ + G G+ + +S++ KGD V
Sbjct: 40 VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTS 99
Query: 103 MTG-WEEYSLITSPYLFKV-PH-ADVPLSYYTGILGMPGMTAYAGFYEVCSPKQG--ECV 157
W+ ++ L KV P D LSY+ G +GMPG+T+ G E G + +
Sbjct: 100 FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTM 159
Query: 158 FISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAAL 216
+S A+GA G + GQ LGC VVG G+ +K LL + LGFD A NYK++ ++ L
Sbjct: 160 VVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQL 218
Query: 217 IRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQYNLDEP------EGVHNLT 270
P G+D+YF+NVGG + D V+ M I +CG ISQYN D P + +
Sbjct: 219 RESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQ 278
Query: 271 RLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTAEGLESAPAALVGLFSG 330
+ + + E FLV +Y + + + + K GK+ E GLE+ AA + +G
Sbjct: 279 K--ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTG 336
Query: 331 RNLGKQVVAVASE 343
N+GKQ+V ++ E
Sbjct: 337 GNIGKQIVCISEE 349
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 163/313 (52%), Gaps = 15/313 (4%)
Query: 43 VLLKNLYLSCDPYMRPRMTKDMEGSYIESFEPGLPISGNGVAKVLDSENPEFKKGDLVWG 102
V ++ LYLS DPYMR RM +D YI ++ + G G+ + +S++ KGD V
Sbjct: 45 VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTS 104
Query: 103 MTG-WEEYSLITSPYLFKV-PH-ADVPLSYYTGILGMPGMTAYAGFYEVCSPKQG--ECV 157
W+ ++ L KV P D LSY+ G +GMPG+T+ G E G + +
Sbjct: 105 FYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTM 164
Query: 158 FISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAAL 216
+S A+GA G + GQ LGC VVG G+ +K LL + LGFD A NYK++ ++ L
Sbjct: 165 VVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQL 223
Query: 217 IRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQYNLDEP------EGVHNLT 270
P G+D+YF+NVGG + D V+ M I +CG ISQYN D P + +
Sbjct: 224 RESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQ 283
Query: 271 RLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTAEGLESAPAALVGLFSG 330
+ + + E FLV +Y + + + + K GK+ E GLE+ AA + +G
Sbjct: 284 K--ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTG 341
Query: 331 RNLGKQVVAVASE 343
N+GKQ+V ++ E
Sbjct: 342 GNIGKQIVCISEE 354
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 168/325 (51%), Gaps = 17/325 (5%)
Query: 33 ELKVPKGSN--GVLLKNLYLSCDPYMRPRMTKDMEGSYIESFEPGLPISGNGVAKVLDSE 90
E +P N V ++ LYLS DPYMR +M +D Y+ ++ G G+ V +S+
Sbjct: 29 EFSLPDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESK 88
Query: 91 NPEFKKGDLVWGMTG-WEEYSLITSPYLFKV-PH-ADVPLSYYTGILGMPGMTAYAGFYE 147
+ + KGD V W+ +++ L KV P D LSY+ G +GMPG+T+ G E
Sbjct: 89 HQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQE 148
Query: 148 V--CSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNRLGFDEAF 204
S + + +S A+GA G L GQ LLGC VVG G+++K L + LGFD A
Sbjct: 149 KGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAV 208
Query: 205 NYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQYNLD--- 261
NYK ++ L P G+D+YF+NVGG + +AV+ M I +CG ISQY+ D
Sbjct: 209 NYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPY 267
Query: 262 ---EPEGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTAEGLE 318
P V + + + + E F V +Y + + + + K GK+ E A+GLE
Sbjct: 268 PPPLPPAVEAIRK--ERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLE 325
Query: 319 SAPAALVGLFSGRNLGKQVVAVASE 343
+ A + +G N+GKQ+V ++ +
Sbjct: 326 NMGVAFQSMMTGGNVGKQIVCISED 350
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 157/313 (50%), Gaps = 15/313 (4%)
Query: 43 VLLKNLYLSCDPYMRPRMTKDMEGSYIESFEPGLPISGNGVAKVLDSENPEFKKGDLVWG 102
V ++ LYLS DPY R + +D Y+ ++ G G+ V +S++ + KGD V
Sbjct: 51 VQVRTLYLSVDPYXRCKXNEDTGTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTS 110
Query: 103 MTG-WEEYSLITSPYLFKV-PH-ADVPLSYYTGILGMPGMTAYAGFYEV--CSPKQGECV 157
W+ +++ L KV P D LSY+ G +G PG+T+ G E S +
Sbjct: 111 FYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTX 170
Query: 158 FISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAAL 216
+S A+GA G L GQ LLGC VVG G+++K L + LGFD A NYK ++ L
Sbjct: 171 VVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQL 229
Query: 217 IRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQYNLD------EPEGVHNLT 270
P G+D+YF+NVGG + + V+ I +CG ISQYN D P V +
Sbjct: 230 REACPGGVDVYFDNVGGDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLPPAVEAIR 289
Query: 271 RLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTAEGLESAPAALVGLFSG 330
+ + + E F V +Y + + + + K GK+ E A+GLE+ A +G
Sbjct: 290 K--ERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETVAKGLENXGVAFQSXXTG 347
Query: 331 RNLGKQVVAVASE 343
N+GKQ+V ++ +
Sbjct: 348 GNVGKQIVCISED 360
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 27/292 (9%)
Query: 66 GSYIESFEPGLPISGNGVAKVLD---SENPEFKKGDLVWGMT--GWEEYSLITSPYLFKV 120
G Y S +P I G+ +V+ S + + G V M + EY+++ P
Sbjct: 75 GRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIAT 132
Query: 121 PHADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 180
P V Y T L + G TAY E+ +G+ V ++AA+G GQ Q +K C+
Sbjct: 133 PVPSVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH 190
Query: 181 VVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVL 240
V+G+ S +K LK+ LG D NYK EP + L + +PEG+D+ +E+VGG M D +
Sbjct: 191 VIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAV 248
Query: 241 INMKVGGRIAVCGMISQYNLDEPEGVHNL------TRLISKRVRMEGFLVSDYNHLYPKF 294
+ GR+ V G IS Y P G+ + +L+ K ++GF ++ Y Y
Sbjct: 249 DALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAA 306
Query: 295 LEMIIPYIKGGKIVYVEDTAE--------GLESAPAALVGLFSGRNLGKQVV 338
+ ++ G +V D + GLES A+ ++ G+N GK VV
Sbjct: 307 MSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 27/292 (9%)
Query: 66 GSYIESFEPGLPISGNGVAKVLD---SENPEFKKGDLVWGMT--GWEEYSLITSPYLFKV 120
G Y S +P I G+ +V+ S + + G V M + EY+++ P
Sbjct: 54 GRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIAT 111
Query: 121 PHADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 180
P V Y T L + G TAY E+ +G+ V ++AA+G GQ Q +K C+
Sbjct: 112 PVPSVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH 169
Query: 181 VVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVL 240
V+G+ S +K LK+ LG D NYK EP + L + +PEG+D+ +E+VGG M D +
Sbjct: 170 VIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAV 227
Query: 241 INMKVGGRIAVCGMISQYNLDEPEGVHNL------TRLISKRVRMEGFLVSDYNHLYPKF 294
+ GR+ V G IS Y P G+ + +L+ K ++GF ++ Y Y
Sbjct: 228 DALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAA 285
Query: 295 LEMIIPYIKGGKIVYVEDTAE--------GLESAPAALVGLFSGRNLGKQVV 338
+ ++ G +V D + GLES A+ ++ G+N GK VV
Sbjct: 286 MSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 337
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 27/292 (9%)
Query: 66 GSYIESFEPGLPISGNGVAKVLD---SENPEFKKGDLVWGMT--GWEEYSLITSPYLFKV 120
G Y S +P I G+ +V+ S + + G V M + EY+++ P
Sbjct: 83 GRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVV--PASIAT 140
Query: 121 PHADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 180
P V Y T L + G TAY E+ +G+ V ++AA+G GQ Q +K C+
Sbjct: 141 PVPSVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCH 198
Query: 181 VVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVL 240
V+G+ S +K LK+ LG D NYK EP + L + +PEG+D+ +E+VGG M D +
Sbjct: 199 VIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAV 256
Query: 241 INMKVGGRIAVCGMISQYNLDEPEGVHNL------TRLISKRVRMEGFLVSDYNHLYPKF 294
+ GR+ V G IS Y P G+ + +L+ K ++GF ++ Y Y
Sbjct: 257 DALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAA 314
Query: 295 LEMIIPYIKGGKIVYVEDTAE--------GLESAPAALVGLFSGRNLGKQVV 338
+ ++ G +V D + GLES A+ ++ G+N GK VV
Sbjct: 315 MSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 366
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 30 SLIELKVPKGSNGVLLKNLYLSCDP---YMRPRMTKDMEGSYIESFEPGLPIS-GNGVAK 85
S I + +PK + VL+K +P Y+R G+Y S +P LP + G+ VA
Sbjct: 48 SDIAVPIPK-DHQVLIKVHACGVNPVETYIR-------SGTY--SRKPLLPYTPGSDVAG 97
Query: 86 VLDS---ENPEFKKGDLVWGMT----GWEEYSLITSPYLFKVPHADVPLSYYTGI-LGMP 137
V+++ FKKGD V+ + G+ EY+L ++K+P L + G +G+P
Sbjct: 98 VIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPE---KLDFKQGAAIGIP 154
Query: 138 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL-LKN 196
TAY K GE V + ASG VG Q A+ G ++G+AG+++ + L+N
Sbjct: 155 YFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN 214
Query: 197 RLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCG 253
G E FN++E ++ +GIDI E + L L + GGR+ V G
Sbjct: 215 --GAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 23/199 (11%)
Query: 123 ADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 182
A +PL++ +TA+ + + G+ V + AA V Q AKL G V+
Sbjct: 145 AAIPLTF---------LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVI 195
Query: 183 GSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCF-PEGIDIYFENVGGKMLDAVLI 241
+AGS+DK+ K LG DE NY PD + R +G D ++ G + V+
Sbjct: 196 ATAGSEDKLRRAKA-LGADETVNYT-HPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIK 253
Query: 242 NMKVGGRIAVCGMISQYNLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYP--KFLE--M 297
GGRIA+ G S Y EG + +++ + G ++ + L+P +F+E
Sbjct: 254 ATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGK 308
Query: 298 IIPYIKGGKIVYVEDTAEG 316
+ P + G+++ +E AEG
Sbjct: 309 LKPVV--GQVLPLEAAAEG 325
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 22/249 (8%)
Query: 64 MEGSYIESFEPGLP-ISGN-GVAKVLD--SENPEFKKGDLV----WGMTGWEEYSLITSP 115
++G+Y P LP + GN GVA+V+ S K GD V G+ W ++ +
Sbjct: 61 IQGNY--GLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEE 118
Query: 116 YLFKVPHADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAK 175
L +VP +D+PL LG+ TAY + + G+ V +A++ VGQ V Q A
Sbjct: 119 ALIQVP-SDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA 176
Query: 176 LLGCYVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGI---DIYFENVG 232
LG + + + L +RL A + E +L ++ F + + + VG
Sbjct: 177 ALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVG 236
Query: 233 GKMLDAVLINMKVGGRIAVCGMISQYNLDEPEGVHNLTRLISKRVRMEGFLVSDY--NHL 290
GK +L + GG + G +++ + V +++ LI K +++ GF +S + +H
Sbjct: 237 GKSSTELLRQLARGGTMVTYGGMAKQPV-----VASVSLLIFKDLKLRGFWLSQWKKDHS 291
Query: 291 YPKFLEMII 299
+F E+I+
Sbjct: 292 PDQFKELIL 300
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 22/249 (8%)
Query: 64 MEGSYIESFEPGLP-ISGN-GVAKVLD--SENPEFKKGDLV----WGMTGWEEYSLITSP 115
++G+Y P LP + GN GVA+V+ S K GD V G+ W ++ +
Sbjct: 74 IQGNY--GLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEE 131
Query: 116 YLFKVPHADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAK 175
L +VP +D+PL LG+ TAY + + G+ V +A++ VGQ V Q A
Sbjct: 132 ALIQVP-SDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA 189
Query: 176 LLGCYVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGI---DIYFENVG 232
LG + + + L +RL A + E +L ++ F + + + VG
Sbjct: 190 ALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVG 249
Query: 233 GKMLDAVLINMKVGGRIAVCGMISQYNLDEPEGVHNLTRLISKRVRMEGFLVSDY--NHL 290
GK +L + GG + G +++ + V +++ LI K +++ GF +S + +H
Sbjct: 250 GKSSTELLRQLARGGTMVTYGGMAKQPV-----VASVSLLIFKDLKLRGFWLSQWKKDHS 304
Query: 291 YPKFLEMII 299
+F E+I+
Sbjct: 305 PDQFKELIL 313
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 30/231 (12%)
Query: 65 EGSYIESFE--PGLPISGNGVAKVLDSENPEFKKGDLVWGMTGW----------EEYSLI 112
+G I +F PG+ +G V SE+P F G V +TGW E + +
Sbjct: 71 KGKIIRNFPMIPGIDFAGT----VRTSEDPRFHAGQEVL-LTGWGVGENHWGGLAEQARV 125
Query: 113 TSPYLFKVPHA-DVPLSYYTGILGMPGMTAYAGFYEV-CSPKQGECVFISAASGAVGQLV 170
+L +P D + G G M + P+ GE V ++ ASG VG
Sbjct: 126 KGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIV-VTGASGGVGSTA 184
Query: 171 GQFAKLLGCYVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFEN 230
LG VV +G + + LK+ LG E + + + ID
Sbjct: 185 VALLHKLGYQVVAVSGRESTHEYLKS-LGASRVLPRDEFAESRPLEKQVWAGAID----T 239
Query: 231 VGGKMLDAVLINMKVGGRIAVCGMISQYNLDEPEGVHNLTRLISKRVRMEG 281
VG K+L VL M GG +A CG+ + L + I + VR++G
Sbjct: 240 VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPT-----TVMPFILRNVRLQG 285
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 106 WEEYSLITSPYLFKVPH-ADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASG 164
+ + L + L KVP D+ + G++ + GMTA ++ K G+ V I AA+G
Sbjct: 98 YSQERLYPAEKLIKVPKDLDLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAG 156
Query: 165 AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFP--E 222
+G ++ +A+ LG V+G+ +++K + + +LG NY + D A ++R +
Sbjct: 157 GMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DF-AEVVREITGGK 213
Query: 223 GIDIYFENVGGKMLDAVLINMKVGGRIAVCGMIS 256
G+D+ ++++G L L ++ G A G S
Sbjct: 214 GVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 103/262 (39%), Gaps = 30/262 (11%)
Query: 94 FKKGDLVWGMT---GWEEYSLITSPYLFKVPH-------ADVPLSYYTGILGMPGMTAYA 143
+ GD V G+ + EY L+ + + P A +P +++T +A
Sbjct: 107 YAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFT---------VWA 157
Query: 144 GFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRLGFDEA 203
++ +GE V I + +G Q A+ G V +AGS K + + RLG
Sbjct: 158 NLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRG 216
Query: 204 FNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQYNLDEP 263
NY+ E D A + +G+DI + +G + + ++ G +++ + ++
Sbjct: 217 INYRSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEK- 274
Query: 264 EGVHNLTRLISKRVRMEGF-----LVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTAEGLE 318
NL+ + KR+ + G + + L + P ++ G + V E
Sbjct: 275 ---VNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFE 331
Query: 319 SAPAALVGLFSGRNLGKQVVAV 340
A L G ++GK + V
Sbjct: 332 DVADAHRLLEEGSHVGKVXLTV 353
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 139 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRL 198
+TA+ + V + + G+ V I A VG Q ++ G + +AGS+ K+ + + +L
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206
Query: 199 GFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQY 258
G FNYK+E A L G+++ + +GG + + + + GR + G++
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 259 NLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPK-----FLEMIIPY 301
+++ P ++L+ KR + L+ ++ Y + F E I+P+
Sbjct: 267 DINGPL----FSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 310
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 18/179 (10%)
Query: 39 GSNGVLLKNLYLS---CDPYMRPRMTKDMEGSYIESFEP-GLPISGNGVAKVLDSENPEF 94
G V+++N + D Y R G Y F P GL G GV + + E F
Sbjct: 27 GPQAVVVRNKAIGLNFIDTYYR-------SGLYPAPFLPSGLGAEGAGVVEAVGDEVTRF 79
Query: 95 KKGDLVWGMTG----WEEYSLITSPYLFKVPHADVPLSYYTGILGMPGMTAYAGFYEVCS 150
K GD V TG + E ++ L K+ AD L + G+T +
Sbjct: 80 KVGDRVAYGTGPLGAYSEVHVLPEANLVKL--ADSVSFEQAAALMLKGLTVQYLLRQTYQ 137
Query: 151 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRLGFDEAFNYKEE 209
K GE + AA+G VG L Q+AK LG ++G+ S +K K LG E +Y E
Sbjct: 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE 195
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 139 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRL 198
+TA+ + V + + G+ V I A VG Q ++ G + +AGS+ K+ + + +L
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 190
Query: 199 GFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQY 258
G FNYK+E A L G+++ + +GG + + + + GR + G++
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 259 NLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPK-----FLEMIIPY 301
+++ P ++L+ KR + L+ ++ Y + F E I+P+
Sbjct: 251 DINGPL----FSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 294
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 27/210 (12%)
Query: 72 FEPGLPISGNGVAKVLDSENPEFKKGDLVW------GMT---GWEEYSLITSPYLFKVPH 122
F PG+ ++G V+ S++P F++GD V G+T G+ EY+ + +L +P
Sbjct: 62 FVPGIDLAGV----VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPK 117
Query: 123 ADVPLSYYTGILGMPGMTAYAGFYEV----CSPKQGECVFISAASGAVGQLVGQFAKLLG 178
+ L I G G TA + + +P++G V ++ A+G VG L G
Sbjct: 118 G-LTLKEAXAI-GTAGFTAALSIHRLEEHGLTPERGP-VLVTGATGGVGSLAVSXLAKRG 174
Query: 179 CYVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCF-PEGIDIYFENVGGKMLD 237
V S G + D L+ LG E + D+ A IR + + VGG+ L
Sbjct: 175 YTVEASTGKAAEHDYLRV-LGAKEVLARE---DVXAERIRPLDKQRWAAAVDPVGGRTLA 230
Query: 238 AVLINMKVGGRIAVCGMISQYNLDEPEGVH 267
VL + GG +AV G+ + P VH
Sbjct: 231 TVLSRXRYGGAVAVSGLTGGAEV--PTTVH 258
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 75 GLPISGNGVAKVLDSENPEFKKGDLVWGMTG--WEEYSLITSP-YLFKVPH--ADVPLSY 129
G SG VAK N F+ GD V ++ + +YS I+S + K+P +D L
Sbjct: 68 GREASGTVVAKGKGVTN--FEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL 125
Query: 130 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 189
Y L + +TA + E K+G+ V + AA+G VG ++ Q K+ G + + A + +
Sbjct: 126 YAAGL-LQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDE 184
Query: 190 KVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRI 249
K+ + K G + N +E L L +G+D F++VG + L +K G
Sbjct: 185 KLKIAK-EYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVF 243
Query: 250 AVCGMISQYNLDEPEGVHNLTRLISKRVRM 279
G S L P ++TRL K + +
Sbjct: 244 VSFGNAS--GLIPP---FSITRLSPKNITL 268
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 139 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK---VDLLK 195
+TAY ++ + GE + + +A+G VG Q A+ LG V +A S+DK V+L +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA-SEDKWQAVELSR 389
Query: 196 NRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMI 255
L +++++ L A R G+D+ ++ G+ DA L + GGR G
Sbjct: 390 EHLASSRTCDFEQQ-FLGATGGR----GVDVVLNSLAGEFADASLRMLPRGGRFLELGKT 444
Query: 256 SQYNLDEPEGVHNLTRLISKRVRMEGF-LVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTA 314
+ E H V + F V + L ++ +G + + TA
Sbjct: 445 DVRDPVEVADAH-------PGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTA 497
Query: 315 EGLESAPAALVGLFSGRNLGKQVV 338
+ AP AL L R++GK V+
Sbjct: 498 WDVRQAPEALRHLSQARHVGKLVL 521
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Query: 74 PGLPISGNGVAKVLDSENPEFKKGDLVWGM---TGWEEYSLITSPYLFKVPHADVPLSYY 130
PG SG + + L ++ GD V W E +++K+P D+ S
Sbjct: 64 PGFECSG--IVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPD-DMSFSE- 119
Query: 131 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 190
M +TAY +EV + ++G V + +A G VGQ V Q + V S K
Sbjct: 120 AAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFK 179
Query: 191 VDLLKNRLG--FDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGG 233
+ +K+ + FD +Y +E + R EG+DI + + G
Sbjct: 180 HEAIKDSVTHLFDRNADYVQE------VKRISAEGVDIVLDCLCG 218
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 2/188 (1%)
Query: 120 VPHADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC 179
VP D G+ +TA+ EV GE V I +A+G VG AK++G
Sbjct: 5 VPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA 64
Query: 180 YVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAV 239
+ +AGS K ++L +RLG + + + + L G+D+ ++ G+ +
Sbjct: 65 RIYTTAGSDAKREML-SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRG 123
Query: 240 LINMKVGGRIAVCGMISQYNLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMII 299
+ + GGR G Y D G+ L + S V + Y + L+ I+
Sbjct: 124 VQILAPGGRFIELGKKDVYA-DASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHIL 182
Query: 300 PYIKGGKI 307
++ GK+
Sbjct: 183 QHVADGKL 190
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 91/233 (39%), Gaps = 34/233 (14%)
Query: 65 EGSYIESFE--PGLPISGNGVAKVLDSENPEFKKGDLVWGMTGW----------EEYSLI 112
+G I F PG+ +G V SE+P F G V +TGW E + +
Sbjct: 50 KGKIIRHFPXIPGIDFAGT----VHASEDPRFHAGQEVL-LTGWGVGENHWGGLAERARV 104
Query: 113 TSPYLFKVPHADVPLSYYTGILGMPGMTAYAGFYEV----CSPKQGECVFISAASGAVGQ 168
+L +P S I+G G TA + P+ GE V ++ ASG VG
Sbjct: 105 KGDWLVALPAG--LSSRNAXIIGTAGFTAXLCVXALEDAGIRPQDGEVV-VTGASGGVGS 161
Query: 169 LVGQFAKLLGCYVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYF 228
LG V +G + LK+ LG + + E + + + ID
Sbjct: 162 TAVALLHKLGYQVAAVSGRESTHGYLKS-LGANRILSRDEFAESRPLEKQLWAGAID--- 217
Query: 229 ENVGGKMLDAVLINMKVGGRIAVCGMISQYNLDEPEGVHNLTRLISKRVRMEG 281
VG K+L VL GG +A CG+ + L + I + VR++G
Sbjct: 218 -TVGDKVLAKVLAQXNYGGCVAACGLAGGFALPT-----TVXPFILRNVRLQG 264
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Query: 138 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNR 197
G+TA+ E + G+ V + +G V Q AK G V+ ++ S++K+D
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 198 LGFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQ 257
LG D N EE + G D E GG L L + GRI+V G++
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 258 YNLDEPEG 265
+ + P G
Sbjct: 292 FEVSGPVG 299
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 81 NGVAKVLDSENPEFKKGDLVWGMT---------GWEEYSLITSPYLFKVPHADVPLSYYT 131
+ V+ S +P F +GD V + G EY+ + +L +P ++ L
Sbjct: 68 DAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQ-NLSLKE-A 125
Query: 132 GILGMPGMTAYAGFYEV----CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 187
+ G G TA + + SP++G + A G G V K G VV S G+
Sbjct: 126 XVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXLNKR-GYDVVASTGN 184
Query: 188 KDKVDLLKNRLGFDEAFNYKEEPD--LNAALIRCFPEGIDIYFENVGGKMLDAVLINMKV 245
++ D LK +LG E + ++ D L A + + +D VGGK L ++L ++
Sbjct: 185 REAADYLK-QLGASEVISREDVYDGTLKALSKQQWQGAVD----PVGGKQLASLLSKIQY 239
Query: 246 GGRIAVCGM 254
GG +AV G+
Sbjct: 240 GGSVAVSGL 248
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 67/184 (36%), Gaps = 30/184 (16%)
Query: 100 VWGMT----GWEEYSLITSPYLFKVPHADVPLSYYTGILGMPGMTAYAGFYEVCSP---- 151
+WG G E +L+ S L P LS+ PG+ + ++ S
Sbjct: 171 IWGFETNFGGLAEIALVKSNQLMPKPDH---LSWEEA--AAPGLVNSTAYRQLVSRNGAG 225
Query: 152 -KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN-------------- 196
KQG+ V I ASG +G QFA G + S K ++ +
Sbjct: 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGY 285
Query: 197 RLGFDEAFNYKEEPDLNAALIRCFP--EGIDIYFENVGGKMLDAVLINMKVGGRIAVCGM 254
R DE +E IR E IDI FE+ G + A + + GG I C
Sbjct: 286 RFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCAS 345
Query: 255 ISQY 258
S Y
Sbjct: 346 TSGY 349
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 20/233 (8%)
Query: 31 LIELKVPKGSNGVLLKNLYLSCDPYMRPRMTKDMEGSYIESFEPGLPISGNGVAKVLDSE 90
L +L P+ + G +L + S P K G + +P I G +A + +
Sbjct: 22 LRKLARPQPAPGQVLVQIEASG---TNPLDAKIRAGEAPHAQQPLPAILGXDLAGTVVAV 78
Query: 91 NPE---FKKGDLVWGMTG--------WEEYSLITSPYLFKVPHADVPLSYYTGILGMPGM 139
PE F+ GD V+G+TG +++ + + L P A +L + +
Sbjct: 79 GPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALT--XRQASVLPLVFI 136
Query: 140 TAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRLG 199
TA+ G + + G+ V I G VG + Q A G V +A D ++ +++ LG
Sbjct: 137 TAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSD-LEYVRD-LG 194
Query: 200 FDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVC 252
+E D A +G D+ ++ +GG +LDA +K G + C
Sbjct: 195 ATPIDASREPEDYAAE--HTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSC 245
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Query: 71 SFEPGLPISGNGVAKVLDSENPEFKKGD-LVWGMTGWEEYSLITSPYLFKVPHADVPLSY 129
S GL G+ + S K GD +V+ + YS + + K +S+
Sbjct: 56 SLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISF 115
Query: 130 YTGILG-MPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 188
+ G+T Y + K E AA+G VG + Q+AK LG ++G+ G+
Sbjct: 116 EQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA 175
Query: 189 DKVDLLKNRLGFDEAFNYKEE 209
K + G + NY+EE
Sbjct: 176 QKAQSAL-KAGAWQVINYREE 195
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 85/222 (38%), Gaps = 34/222 (15%)
Query: 66 GSYIESFEPGLPISGNGVAKVLDS----ENPEFKKGDLVWGMT----GWEEYSLITSPYL 117
G + +++PG + + ++ L+S ++ +WG G E +L+ + L
Sbjct: 151 GPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETNFGGLAEIALVKTNQL 210
Query: 118 FKVPHADVPLSYYTGILGMPGMTAYAGFYEVCSP-----KQGECVFISAASGAVGQLVGQ 172
P L++ PG+ + ++ S KQG+ V I ASG +G Q
Sbjct: 211 MPKPKH---LTWEEA--AAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQ 265
Query: 173 FAKLLGCYVVGSAGSKDKVDLL----------KNRLGF----DEAFNYKEEPDLNAALIR 218
FA G + S K ++ +N G+ DE +E IR
Sbjct: 266 FALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYKFWKDEHTQDPKEWKRFGKRIR 325
Query: 219 CFP--EGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQY 258
E IDI FE+ G + A + + GG I C S Y
Sbjct: 326 ELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTSGY 367
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 106 WEEYSLITSPYLFKVPHADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGA 165
W+EY ++ ++ +P D + + + +TA+ E + ++ + + ++A A
Sbjct: 99 WQEYVKTSADFVVPIP--DSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSA 156
Query: 166 VGQLVGQFAKLLGCYVVG-SAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGI 224
+G L Q +++L ++ + +K +LL RLG + P + G
Sbjct: 157 IGHLFAQLSQILNFRLIAVTRNNKHTEELL--RLGAAYVIDTSTAPLYETVMELTNGIGA 214
Query: 225 DIYFENVGGKMLDAVLINMKVGGRIAVCGMISQYNLDEPEGV 266
D +++GG + + +++ G G++S ++ E V
Sbjct: 215 DAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGIQVNWAEIV 256
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 37.7 bits (86), Expect = 0.010, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 46/123 (37%), Gaps = 28/123 (22%)
Query: 123 ADVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 182
A VP+ Y TAY + GE V I + SG VGQ A GC V
Sbjct: 1646 ASVPIVY---------TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVF 1696
Query: 183 GSAGSKDKVDLLKNRLGFDEAFNYKEEPDLNAALIRCFPEGIDIYFE-----NVGGKMLD 237
+ GS +K L+ R P L+ CF D FE + GK +D
Sbjct: 1697 TTVGSAEKRAYLQARF-----------PQLDET---CFANSRDTSFEQHVLRHTAGKGVD 1742
Query: 238 AVL 240
VL
Sbjct: 1743 LVL 1745
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 154 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPDLN 213
G V IS A+G +G L Q+AK +G V+G G + K +L ++ +G + ++ +E D+
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDIV 228
Query: 214 AALIRCFPEG 223
A+++ G
Sbjct: 229 GAVLKATDGG 238
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 16/123 (13%)
Query: 152 KQGECVFISAASGAVGQLVGQFAKLLG---CYVVGSAGSKDKV-----DLLKNRLGFDEA 203
KQG+ V I ASG +G QF K G VV SA + V DL+ NR
Sbjct: 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGIT 278
Query: 204 FNYKEEPDLNAALIRCFPEGI--------DIYFENVGGKMLDAVLINMKVGGRIAVCGMI 255
+ ++P R + + DI FE+ G +I + GG + CG
Sbjct: 279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSS 338
Query: 256 SQY 258
S Y
Sbjct: 339 SGY 341
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 139 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRL 198
+TAY + + GE V + AA+GA+G Q A+ +G V+ +A +K+ L L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 199 GFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQY 258
G +EA Y E P+ A G+D+ E V GK ++ L + GGR+ I
Sbjct: 170 GAEEAATYAEVPERAKAW-----GGLDLVLE-VRGKEVEESLGLLAHGGRLVYIAPIPPL 223
Query: 259 NL 260
L
Sbjct: 224 RL 225
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 139 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRL 198
+TAY + + GE V + AA+GA+G Q A+ +G V+ +A +K+ L L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 199 GFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCG 253
G +EA Y E P+ A G+D+ E V GK ++ L + GGR+ G
Sbjct: 170 GAEEAATYAEVPERAKAW-----GGLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 139 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNRL 198
+TAY + + GE V + AA+GA+G Q A+ G V+ +A +K+ L L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLA-LPLAL 169
Query: 199 GFDEAFNYKEEPDLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCG 253
G +EA Y E P+ A G+D+ E V GK ++ L + GGR+ G
Sbjct: 170 GAEEAATYAEVPERAKAW-----GGLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|1VDY|A Chain A, Nmr Structure Of The Hypothetical Enth-Vhs Domain
At3g16270 From Arabidopsis Thaliana
pdb|2DCP|A Chain A, Fully Automated Nmr Structure Determination Of The
Enth-Vhs Domain At3g16270 From Arabidopsis Thaliana
Length = 140
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 169 LVGQFAKLLGCYVVGSAGSKDKVDLLKNRLGFDEAFNYKEEPD------LNAALIRCFPE 222
+V Q A L Y VG +GS+ + ++ +N + F+YK PD LN A+ E
Sbjct: 64 IVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHE 123
Query: 223 GIDIYFENVGG 233
I F G
Sbjct: 124 TISAIFSEENG 134
>pdb|1CSC|A Chain A, Structure Of Ternary Complexes Of Citrate Synthase With D-
And L-Malate: Mechanistic Implications
pdb|2CSC|A Chain A, Structure Of Ternary Complexes Of Citrate Synthase With
D-And L- Malate: Mechanistic Implications
pdb|3CSC|A Chain A, Structure Of Ternary Complexes Of Citrate Synthase With
D-And L- Malate: Mechanistic Implications
pdb|4CSC|A Chain A, Structure Of Ternary Complexes Of Citrate Synthase With
D-And L- Malate: Mechanistic Implications
pdb|5CTS|A Chain A, Proposed Mechanism For The Condensation Reaction Of
Citrate Synthase. 1.9-Angstroms Structure Of The Ternary
Complex With Oxaloacetate And Carboxymethyl Coenzyme A
pdb|6CTS|A Chain A, Proposed Mechanism For The Condensation Reaction Of
Citrate Synthase. 1.9-Angstroms Structure Of The Ternary
Complex With Oxaloacetate And Carboxymethyl Coenzyme A
pdb|5CSC|A Chain A, Structure Of An Open Form Of Chicken Heart Citrate
Synthase At 2.8 Angstroms Resolution
Length = 433
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 211 DLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQYNLDEPEGVHNLT 270
D+ AALI I + + GG L + ++M GG + G++ + ++ +P+
Sbjct: 8 DVLAALIPKEQARIKTFRQQHGGTALGQITVDMSYGGMRGMKGLVYETSVLDPD------ 61
Query: 271 RLISKRVRMEGFLVSDYNHLYPK 293
+ +R GF + + L PK
Sbjct: 62 ----EGIRFRGFSIPECQKLLPK 80
>pdb|5CSC|B Chain B, Structure Of An Open Form Of Chicken Heart Citrate
Synthase At 2.8 Angstroms Resolution
Length = 429
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 211 DLNAALIRCFPEGIDIYFENVGGKMLDAVLINMKVGGRIAVCGMISQYNLDEPEGVHNLT 270
D+ AALI I + + GG L + ++M GG + G++ + ++ +P+
Sbjct: 8 DVLAALIPKEQARIKTFRQQHGGTALGQITVDMSYGGMRGMKGLVYETSVLDPD------ 61
Query: 271 RLISKRVRMEGFLVSDYNHLYPK 293
+ +R GF + + L PK
Sbjct: 62 ----EGIRFRGFSIPECQKLLPK 80
>pdb|1E18|A Chain A, Tungsten-Susbstituted Dmso Reductase From Rhodobacter
Capsulatus
Length = 823
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 258 YNLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTA 314
Y P +HN T L+ + + + G V+ ++I+P++ G VY + TA
Sbjct: 156 YGWKSPGRLHNCTTLLRRMLTLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTA 212
>pdb|1E5V|A Chain A, Oxidized Dmso Reductase Exposed To Hepes Buffer
pdb|1E5V|C Chain C, Oxidized Dmso Reductase Exposed To Hepes Buffer
pdb|1H5N|A Chain A, Dmso Reductase Modified By The Presence Of Dms And Air
pdb|1H5N|C Chain C, Dmso Reductase Modified By The Presence Of Dms And Air
pdb|1DMR|A Chain A, Oxidized Dmso Reductase From Rhodobacter Capsulatus
pdb|2DMR|A Chain A, Dithionite Reduced Dmso Reductase From Rhodobacter
Capsulatus
pdb|3DMR|A Chain A, Structure Of Dmso Reductase From Rhodobacter Capsulatus At
Ph 7.0
Length = 823
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 258 YNLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTA 314
Y P +HN T L+ + + + G V+ ++I+P++ G VY + TA
Sbjct: 156 YGWKSPGRLHNCTTLLRRMLTLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTA 212
>pdb|4DMR|A Chain A, Reduced Dmso Reductase From Rhodobacter Capsulatus With
Bound Dmso Substrate
Length = 823
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 258 YNLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTA 314
Y P +HN T L+ + + + G V+ ++I+P++ G VY + TA
Sbjct: 156 YGWKSPGRLHNCTTLLRRMLTLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTA 212
>pdb|1E60|A Chain A, Oxidized Dmso Reductase Exposed To Hepes-Structure Ii
Buffer
pdb|1E60|C Chain C, Oxidized Dmso Reductase Exposed To Hepes-Structure Ii
Buffer
pdb|1E61|A Chain A, Oxidized Dmso Reductase Exposed To Hepes-Structure Ii
Buffer
pdb|1E61|C Chain C, Oxidized Dmso Reductase Exposed To Hepes-Structure Ii
Buffer
Length = 823
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 257 QYNLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTA 314
Y P +HN T L+ + + + G V+ ++I+P++ G VY + TA
Sbjct: 155 SYGWKSPGRLHNCTTLLRRMLTLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTA 212
>pdb|1DMS|A Chain A, Structure Of Dmso Reductase
Length = 781
Score = 27.7 bits (60), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 258 YNLDEPEGVHNLTRLISKRVRMEGFLVSDYNHLYPKFLEMIIPYIKGGKIVYVEDTA 314
Y P +HN T L+ + + + G V+ ++I+P++ G VY + TA
Sbjct: 114 YGWKSPGRLHNCTTLLRRMLTLAGGYVNGAGDYSTGAAQVIMPHVVGTLEVYEQQTA 170
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.139 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,735,249
Number of Sequences: 62578
Number of extensions: 485087
Number of successful extensions: 1217
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1115
Number of HSP's gapped (non-prelim): 54
length of query: 343
length of database: 14,973,337
effective HSP length: 100
effective length of query: 243
effective length of database: 8,715,537
effective search space: 2117875491
effective search space used: 2117875491
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)