BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019298
(343 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 221 bits (562), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 175/309 (56%), Gaps = 15/309 (4%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
K VISL++GDPTV S K+NGYAP+ G +R +A Y +
Sbjct: 31 KTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPE 90
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
P L DV +TSGC+QAI++ +A+L+ PG NIL+PRPGF +Y A IEV+ ++L
Sbjct: 91 AP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNL 148
Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
LP+K WE+DL +ESL D+ T LV+ NP NPCG+V+S +HLQK+ A + ++ADE
Sbjct: 149 LPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADE 208
Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
+YG +VF D + PM + VPIL+ G L+ RW+VPGWRLGW + D +F
Sbjct: 209 IYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIRDG 268
Query: 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHG------NFLENFAGSCVPSYKLIPE 327
+K ILG P T +Q G L +I+Q +FL++ A C + IP
Sbjct: 269 LVKLSQRILG-PCTIVQ-----GALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPG 322
Query: 328 LINFKSTGS 336
L + +G+
Sbjct: 323 LQPVRPSGA 331
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 176/309 (56%), Gaps = 15/309 (4%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
K +ISL++GDPTV S K+NGYAP+ G +R IA Y +
Sbjct: 54 KTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPE 113
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
P L DV +TSGC+QAID+ +A+L+ PG NIL+PRPGF +Y+ A IEV+ ++L
Sbjct: 114 AP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNL 171
Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
LP+K WE+DL +E L D+ T L++ NP NPCG+V+S +HLQK+ A + ++ADE
Sbjct: 172 LPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADE 231
Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
+YG +VF D + P+ + VPIL+ G L+KRW+VPGWRLGW + D +F
Sbjct: 232 IYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 291
Query: 274 RMKKYFDILGDPATFIQVCIMYGCLSTIM----QIMIHG--NFLENFAGSCVPSYKLIPE 327
+K ILG P T +Q G L +I+ H +FL++ A C + IP
Sbjct: 292 LVKLSQRILG-PCTIVQ-----GALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPG 345
Query: 328 LINFKSTGS 336
L + +G+
Sbjct: 346 LRPVRPSGA 354
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 148/303 (48%), Gaps = 20/303 (6%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
K +I L++GDPT+ S++ NGY PT G P R A+A +
Sbjct: 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSF 92
Query: 95 PYK------LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
+K + ++V + SG + I +A+ + G L+P+PGFP YE I +
Sbjct: 93 VHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGM 152
Query: 149 RHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
++ P+ WE DLD+I L D T L++ NP NPCG+ +S +H++ + A +L+
Sbjct: 153 HFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLP 212
Query: 209 VIADEVYGHLVFGDK----PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264
+ +DE+Y +VF K F + F +TVP + LG + +VPGWRLGW + DP G
Sbjct: 213 LFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHG 272
Query: 265 MFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST--------IMQIMIHGNFLENFAG 316
P +E +K+ ++ P T +Q + L+T + +I +L N G
Sbjct: 273 --NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIG 330
Query: 317 SCV 319
C+
Sbjct: 331 ECI 333
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 11/302 (3%)
Query: 12 GSIITIKGMLSL-------LMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXX 64
GSI K LS+ ++ + + EK KVI L +GDP
Sbjct: 8 GSIRASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDF--QPPEHMKEAYCK 65
Query: 65 XXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG 124
E N Y + GLP R+AI E R +TP+DV VT+ T+A+ + L PG
Sbjct: 66 AIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPG 125
Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
IL+P P +P Y F + + + ++ W+ D+DDI T A+ +INP N
Sbjct: 126 DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNN 185
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
P G +Y + L+++ A + + VI+DE+Y + + + P G VP++ + LS
Sbjct: 186 PTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISP-GSLTKDVPVIVMNGLS 244
Query: 245 KRWIVPGWRLGWFVTTDPCGMFRKPK-VVERMKKYFDILGDPATFIQVCIMYGCLSTIMQ 303
K + GWRLG+ DP + + ++R+ + PA F + + G + + +
Sbjct: 245 KVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKE 304
Query: 304 IM 305
M
Sbjct: 305 YM 306
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
+ YAP AGLP R A+AE + + P V VTSG T+A+ V + L PG +++
Sbjct: 55 DQYAPPAGLPALREALAEE------FAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVL 108
Query: 131 RPGFPIYELSAAFRHIEVR--HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188
P F +Y A + R DL P+ G+ +DL +E T AL++ P NP G
Sbjct: 109 EPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTPRTRALLLNTPMNPTGL 167
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-----FVPMGVFGSTVPILTLGSL 243
V+ + L+ +A A +I+DEVY L +G++P F P F T+GS
Sbjct: 168 VFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTF-------TVGSA 220
Query: 244 SKRWIVPGWRLGWFV 258
KR G+R+GW V
Sbjct: 221 GKRLEATGYRVGWIV 235
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
YAP AG+P R A+AE R+ +TP + VT G +QA+ ++ A+L PG +++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
P + Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
GWR+G+
Sbjct: 239 TGWRIGY 245
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
YAP AG+P R A+AE R+ +TP + VT G +QA+ ++ A+L PG +++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
P + Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
GWR+G+
Sbjct: 239 TGWRIGY 245
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
YAP AG+P R A+AE R+ +TP + VT G +QA+ ++ A+L PG +++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
P + Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
GWR+G+
Sbjct: 239 TGWRIGY 245
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
YAP AG+P R A+AE R+ +TP + VT G +QA+ ++ A+L PG +++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
P + Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
GWR+G+
Sbjct: 239 TGWRIGY 245
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
YAP AG+P R A+AE R+ +TP + VT G QA+ ++ A+L PG +++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
P + Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
GWR+G+
Sbjct: 239 TGWRIGY 245
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
YAP AG+P R A+AE R+ +TP + VT G QA+ ++ A+L PG +++
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
P + Y F V + LP++G+ D + + T ALV+ +P NP G VY
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
+ L+ LA A + +++DE+Y HL++ + F P G P LT+ + + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAM 238
Query: 250 PGWRLGW 256
GWR+G+
Sbjct: 239 TGWRIGY 245
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 30/266 (11%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
K VISL +G+P + + Y P GL R AIAE L +
Sbjct: 26 KDVISLGIGEPDFDTP-----QHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 80
Query: 95 PYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRH 150
+ P ++ V G QA + ++ + G +L+P P F Y + A + +EV
Sbjct: 81 GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 140
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
++ + + +++D+++ T AL+I +P NP G V + + L+++A+ + +VI
Sbjct: 141 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197
Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
+DEVY H ++ D + G+F T+ T+ SK + + GWRLG FV
Sbjct: 198 SDEVYEHFIYDDARHYSIASLDGMFERTI---TVNGFSKTFAMTGWRLG-FVAAPSW--- 250
Query: 267 RKPKVVERMKKYFDILGD--PATFIQ 290
++ERM K F + P TFIQ
Sbjct: 251 ----IIERMVK-FQMYNATCPVTFIQ 271
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 30/266 (11%)
Query: 35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
K VISL +G+P + + Y P GL R AIAE L +
Sbjct: 25 KDVISLGIGEPDFDTP-----QHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 79
Query: 95 PYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRH 150
+ P ++ V G QA + ++ + G +L+P P F Y + A + +EV
Sbjct: 80 GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
++ + + +++D+++ T AL+I +P NP G V + + L+++A+ + +VI
Sbjct: 140 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196
Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
+DEVY H ++ D + G+F T+ T+ SK + + GWRLG FV
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERTI---TVNGFSKTFAMTGWRLG-FVAAPSW--- 249
Query: 267 RKPKVVERMKKYFDILGD--PATFIQ 290
++ERM K F + P TFIQ
Sbjct: 250 ----IIERMVK-FQMYNATCPVTFIQ 270
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y+ +AG+ R A A Y R + P +V VT+G ++AI + A+++ PG IL+ P
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
+ Y A +++ ++G+ + ++ES ++ T +V+ NP NP G VY
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-----LTLGSLSKRW 247
+ L E A + +I DEVY +VF G F S + I + + S+S ++
Sbjct: 194 DEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXKF 246
Query: 248 IVPGWRLGWFVTTD 261
G R+G +T +
Sbjct: 247 SACGARVGCLITRN 260
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 86/185 (46%), Gaps = 7/185 (3%)
Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGW 159
+V VT G T+AI A+ L PG+ +LL P + Y A L+PD +G+
Sbjct: 87 TEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGF 146
Query: 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219
+D D + T AL+I +P NP G V S L +AE A +VI DEVY HLV
Sbjct: 147 ALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV 206
Query: 220 FGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
F +P+ F G +T+ S + + GW++GW CG V K+Y
Sbjct: 207 FDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW-----ACGPAELIAGVRAAKQY 261
Query: 279 FDILG 283
+G
Sbjct: 262 LSYVG 266
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y G+ R IA+ + ++P+ V VT+G QA+ A L PG +++ P
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
+ Y V + K ++ L+++E L T A++I +P NP G VY
Sbjct: 134 VWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252
+ L+ L A K +I+DEVY LV+ D+ + V I+ + SK + GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 253 RLGWFVTTDPCG 264
R+G+ ++++
Sbjct: 254 RVGYLISSEKVA 265
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
N Y+PT G P ++ + S +L +V VT+G + I + L G +++
Sbjct: 89 NQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVF 148
Query: 131 RPGFPIYELSAAFRHIEVRHFDLLPDKG----------WEVDLDDIESLADQNTVALVII 180
P F Y + +V + + P K W +D + E T A++I
Sbjct: 149 EPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIIN 208
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
P NP G V++ + L L K ++I+DEVY HL F D F + + LTL
Sbjct: 209 TPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS-FTRIATLSPEIGQLTL 267
Query: 241 --GSLSKRWIVPGWRLGWFVTTD 261
GS + GWR+GW ++ +
Sbjct: 268 TVGSAGXSFAATGWRIGWVLSLN 290
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLP 130
Y+ + G+ R AIA ++ + +D+F+T G + + + M LL R + IL+P
Sbjct: 129 AYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVP 188
Query: 131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE-SLADQ-----NTVALVIINPGN 184
P +P+Y S A + + L GW ++ D++ L D N ALV+INPGN
Sbjct: 189 IPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGN 248
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--------KPFVPMGVFGSTVP 236
P G V + ++ + + +++ADEVY ++ D K +G +P
Sbjct: 249 PTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLP 308
Query: 237 ILTLGSLSKRWIVP-GWRLGWFVTT 260
+++ S+SK + G R G+F T
Sbjct: 309 LVSYQSVSKGYYGECGKRGGYFEIT 333
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 13/222 (5%)
Query: 68 EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGAN 126
+ N Y G P +A++ + ++ PN+ + V G ++ ++ L PG
Sbjct: 52 DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDE 111
Query: 127 ILLPRPGFPIYE----LSAA---FRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVAL 177
+++ P + YE ++ A F + + D + W D ++ES T A+
Sbjct: 112 VIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171
Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVP 236
++ P NP G VY+ Q LQ +A+ K TL I+DEVY LV+ V + G
Sbjct: 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
+T+GS K + V GW+LGW + P + + + V++ Y
Sbjct: 232 TITIGSAGKTFSVTGWKLGW--SIGPAHLIKHLQTVQQNSFY 271
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y G P +A+++ S+ + + P +V VT G +A+ + G +++
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIIN 181
P F YE R L P+K W +D +++E+L ++ T ++I
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----- 236
P NP G V L+ +A K L ++DEVY H+VF +PF + + T+P
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVF--EPFEHIRI--CTLPGMWER 246
Query: 237 ILTLGSLSKRWIVPGWRLGW 256
+T+GS K + + GW++GW
Sbjct: 247 TITIGSAGKTFSLTGWKIGW 266
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y T G P + +A + L ++ P +V VT G A+ A L G +++
Sbjct: 61 NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
P F YE + A R + +++ +L W++D ++ T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
P NP G V+S + L+ +A + + I DEVY +V+ + + G L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
T+GS K + GW++GW + D
Sbjct: 241 TIGSAGKTFSATGWKVGWVLGPD 263
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y G P +A+++ S+ + + P +V VT G +A+ + G +++
Sbjct: 71 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIIN 181
P F YE R L P+K W +D +++E+L ++ T ++I
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----- 236
P NP G V L+ +A K L ++DEVY H+VF +PF + + T+P
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVF--EPFEHIRI--CTLPGMWER 246
Query: 237 ILTLGSLSKRWIVPGWRLGW 256
+T+GS + + GW++GW
Sbjct: 247 TITIGSAGXTFSLTGWKIGW 266
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 68 EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGAN 126
+ N Y G P +A++ + ++ PN+ + V G ++ ++ L PG
Sbjct: 52 DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDE 111
Query: 127 ILLPRPGFPIYE----LSAA---FRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVAL 177
+++ P + YE ++ A F + + D + W D ++ES T A+
Sbjct: 112 VIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171
Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVP 236
++ P NP G VY+ Q LQ +A+ K TL I+DEVY LV+ V + G
Sbjct: 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
+T+GS + V GW+LGW + P + + + V++ Y
Sbjct: 232 TITIGSAGXTFSVTGWKLGW--SIGPAHLIKHLQTVQQNSFY 271
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILL 129
N YAP G+ R AIA+ R Y+ + D+ VT+G T+A+ A+ L R G ++
Sbjct: 61 NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
P + Y + A V+ L P + VD + +L + T +++ P NP V
Sbjct: 121 FDPSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEFAALLSERTRLVILNTPHNPSATV 179
Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWI 248
+ L + + VI+DEVY H+ F + + + + S K +
Sbjct: 180 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH 239
Query: 249 VPGWRLGWFVTTDP 262
+ GW++G+ V P
Sbjct: 240 MTGWKVGYCVAPAP 253
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y P AG P R AIA+ L RD +++ VT+G Q+I M + PG +++P P
Sbjct: 63 YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122
Query: 133 GFPIY-ELSAAFRHIEVRHFDLLP---DKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188
+ Y E+ V +LP + ++V + I T LV P NP G
Sbjct: 123 FWVSYPEMVKLAEGTPV----ILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGM 178
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV--PILTLGSLSKR 246
VY+ ++ +A+ A + V++DE+Y +++ D + +G + +K
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT 238
Query: 247 WIVPGWRLGWFVTTDP 262
+ + GWR+G+ P
Sbjct: 239 YAMTGWRVGFLAGPVP 254
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y T G P + +A + L ++ P +V VT G A+ A L G +++
Sbjct: 61 NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
P F YE + A R + +++ +L W++D ++ T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
P NP G V+S + L+ +A + + I DEVY +V+ + + G L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
T+GS + GW++GW + D
Sbjct: 241 TIGSAGXTFSATGWKVGWVLGPD 263
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
N Y T G P + +A + L ++ P +V VT G A+ A L G +++
Sbjct: 61 NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
P F YE + A R + +++ +L W++D ++ T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
P NP G V+S + L+ +A + + I DEVY +V+ + + G L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
T+GS + GW++GW + D
Sbjct: 241 TIGSAGXTFSATGWKVGWVLGPD 263
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 37 VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
+ISLA G P + ++K Y T G R + ++L + Y
Sbjct: 78 IISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKR--Y 135
Query: 97 KLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL 153
++ ND+ +TSG QA+D+ + PG +++ P + L+A AF E ++ +
Sbjct: 136 GISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNFYEPQYIQI 191
Query: 154 -LPDKGWEVD-----LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
L D+G +V+ L +++S + V + NP G + + L E A++
Sbjct: 192 PLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDF 251
Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
+V+ D+ YG L + P + + ++ LG+ SK + PG+R+GW V DP G+ R
Sbjct: 252 IVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIR 308
Query: 268 KPKVVER 274
K ++ ++
Sbjct: 309 KMEIAKQ 315
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGANILL 129
+GY G TR AIAE+L+ ++++ T G ++ + AL S +
Sbjct: 70 HGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFIT 129
Query: 130 PRPGFPIYEL---SAAFRHIEV----RHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182
P FP Y++ +A R +EV HF ++D D +E + +T ++I +P
Sbjct: 130 IAPYFPEYKVFVNAAGARLVEVPADTEHF--------QIDFDALEERINAHTRGVIINSP 181
Query: 183 GNPCGNVYSYQHLQKLAETANKLKT------LVIADEVYGHLVF-GDK-PFVPMGVFGST 234
NP G VYS + ++KL++ K +IADE Y +V+ G K PFV + +T
Sbjct: 182 NNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV-TKYYDNT 240
Query: 235 VPILTLGSLSKRWIVPGWRLGWFVTTD 261
L S SK +PG R+G+ + D
Sbjct: 241 ---LVCYSYSKSLSLPGERIGYVLVPD 264
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 37 VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
+ISLA G P + ++K Y T G R + ++L + Y
Sbjct: 33 IISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKR--Y 90
Query: 97 KLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL 153
++ ND+ +TSG QA+D+ + PG +++ P + L+A AF E ++ +
Sbjct: 91 GISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNFYEPQYIQI 146
Query: 154 -LPDKGWEVD-----LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
L D+G +V+ L +++S + V + NP G + + L E A++
Sbjct: 147 PLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDF 206
Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
+V+ D+ YG L + P + + ++ LG+ SK + PG+R+GW V DP G+ R
Sbjct: 207 IVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIR 263
Query: 268 KPKVVER 274
K ++ ++
Sbjct: 264 KMEIAKQ 270
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 20/255 (7%)
Query: 17 IKG--MLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYA 74
IKG + ++ ++ + +K K+ISLA GDP K Y
Sbjct: 14 IKGSALADVMKKASELQKKGVKLISLAAGDPD-PELIPRAVLGEIAKEVLEKEPKSVMYT 72
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
P G+P R +A +L + +++P ++ +T G T A+D+ +L PG ++ P +
Sbjct: 73 PANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSY 132
Query: 135 -----PIYELSAAFRHIEVRHFDLLPDKGWEVDL--DDIESL-ADQNTVALVIINP--GN 184
+L A + V + G VDL + I+ L A V L+ P N
Sbjct: 133 INTLLAFEQLGAKIEGVPV------DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQN 186
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
P G S + + L E A+K L+I D Y + + VP+ + ++ G+LS
Sbjct: 187 PMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLS 246
Query: 245 KRWIVPGWRLGWFVT 259
K + G+R+GW +
Sbjct: 247 K-VLGTGFRIGWIIA 260
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 13/228 (5%)
Query: 37 VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
VISLA G P + ++K Y T G R A+A ++ +
Sbjct: 43 VISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDI 102
Query: 97 KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL- 153
++ ++ +G QA+D+ + PG I++ P + L+A AF++ + +
Sbjct: 103 PMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTY----LAAIQAFKYYDPEFISIP 158
Query: 154 LPDKGWEVDLDDIESLADQNT-----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
L DKG VDL + + + + + NP G S +KL E AN+ L
Sbjct: 159 LDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFL 218
Query: 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
++ D Y L + +P P+ F ++ LG+ SK + PG+R+GW
Sbjct: 219 IVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFRIGW 265
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 13/218 (5%)
Query: 68 EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGAN 126
E +GY+ + G+P RRAI+ + ++ P ++ VT G + + M G
Sbjct: 66 EDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDT 125
Query: 127 ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186
IL+P P +PI+ A +VR L+P + +L+ + +++ P NP
Sbjct: 126 ILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPT 185
Query: 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSK 245
+++ A + +V+ D Y +V+ G K M V G+ + +LSK
Sbjct: 186 AQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSK 245
Query: 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVE---RMKKYFD 280
+ + GWR+G+ V P++V R+K Y D
Sbjct: 246 SYNMAGWRIGFMVGN--------PELVSALARIKSYHD 275
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 86 IAEYLSRDLPYK----LTPNDVFVTSGCTQAIDVAMALLS-----RPGANILLPRPGFPI 136
I Y ++L YK D+F T G T AI A L+ + G I + P F
Sbjct: 146 IINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP 205
Query: 137 YELSAAFRHIEVRHFDL--LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
Y + E+ DL WE++ ++IE L D + AL+++NP NP +
Sbjct: 206 YLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNA 265
Query: 195 LQKLAETANKL-KTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILT--LGSLSKRWIVP 250
L + + K K +I+DEVYG FVP S VP T + S S +
Sbjct: 266 LNAIKQAVEKNPKLXIISDEVYG-------AFVPNFKSIYSVVPYNTXLVYSYSXLFGCT 318
Query: 251 GWRLGWF------VTTDPCGMFRKPKVVERMKKYFDILGDP 285
GWRLG V D K ++ + K+Y ++ DP
Sbjct: 319 GWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDP 359
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 73 YAPTAGLPLTRRAIAEYLSR-DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN----I 127
Y+ + G+ R +A Y++R D P+++++T+G + I + +L G +
Sbjct: 125 YSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGV 184
Query: 128 LLPRPGFPIYE-LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIIN 181
++P P +P+Y + + I+V ++ L + W ++++++ + + L IIN
Sbjct: 185 MIPIPQYPLYSAVISELDAIQVNYY-LDEENCWALNVNELRRAVQEAKDHCDPKVLCIIN 243
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--------DKPFVPMG-VFG 232
PGNP G V S + ++ + A + K ++ADEVY V+ K MG +
Sbjct: 244 PGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS 303
Query: 233 STVPILTLGSLSKRWIVP-GWRLGWF 257
S V + + S SK ++ G+R G+
Sbjct: 304 SNVELASFHSTSKGYMGECGYRGGYM 329
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
GY P L +A AE+ + Y+ P +F + + +A+ + + +++P
Sbjct: 55 GYQPDGSL--LSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPT 112
Query: 132 PGFP--IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
P +P + LSA R + D ++L D+E ++++ NP NP G V
Sbjct: 113 PAYPPFFHLLSATQRE------GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXV 166
Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-LTLGSLSKRWI 248
++ + L +L + A++ V+ DE++ LVF + V GV + + +T+ + S W
Sbjct: 167 FAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSXAWN 226
Query: 249 VPGWRLGWFVTTDP 262
+ G + + ++P
Sbjct: 227 IAGLKCAQIIFSNP 240
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y G P ++++++ L + P + T+G T A + + L PG +++ P
Sbjct: 59 YGWIEGSPAFKKSVSQ-----LYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 133 GFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
+ +Y++ + EV + + + GW DL+ + L T + I N NP G V
Sbjct: 114 TYQQLYDIPKSL-GAEVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXD 172
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251
+L++L E A+++ +++DEVY D P + + V+ + + SLS + +PG
Sbjct: 173 RTYLEELVEIASEVGAYILSDEVYRSFSELDVPSI-IEVYDKGIAV---NSLSXTYSLPG 228
Query: 252 WRLGW 256
R+GW
Sbjct: 229 IRIGW 233
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
+A+ ++ + Y D+ G AI +A+ ++ G +L+ P +P + S
Sbjct: 73 QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 144 RHIEVRHFDLLPDKG-WEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAET 201
+ ++ L + G +++D + +E+ +N V L ++ NP NP G V+ + L+++
Sbjct: 133 NNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHL 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGW 256
K ++++DE++ L V F + P L L S +K + + G + +
Sbjct: 193 CQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNSY 249
Query: 257 FVTTDP--CGMFRKPKVV 272
+ +P C F+ ++V
Sbjct: 250 AIIENPTLCAQFKHQQLV 267
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 24 LMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTR 83
L Q ++ E KKVI L +G+P ++ E Y + G+ R
Sbjct: 20 LAQKLESEG--KKVIHLEIGEPDFNT-----PKPIVDEGIKSLKEGKTHYTDSRGILELR 72
Query: 84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
I+E + P+++ +T G + + A++ + G +L+ P +P Y+ F
Sbjct: 73 EKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRF 132
Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
+ D ++ +E T A++I +P NP G V +++ E A
Sbjct: 133 LGAKPVFCDFT--------VESLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAY 180
Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
+ +I+DE+Y LV+ K + + + + + S + + GWR+G+ ++ D
Sbjct: 181 ENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISND 238
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 32/276 (11%)
Query: 84 RAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA 141
+A+A++ ++ ++ P + + SG AI + + PG IL+ P + +
Sbjct: 69 KAVADW--EEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVI 126
Query: 142 AFRHIEVRHFDLL-PDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
V DL+ + + V+ D+E LA + V NP NP G +S + ++++A
Sbjct: 127 EGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIA 186
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLG 255
E K + L+I+DE++G LV D+ P T+ +K W+V P
Sbjct: 187 ELCAKHQVLLISDEIHGDLVLTDEDITPA---------FTVDWDAKNWVVSLISPSXTFN 237
Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIM------YGCLSTIMQIMIH 307
C + P + R ++ F + +G+P + + L + Q++
Sbjct: 238 LAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVL-- 295
Query: 308 GNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343
+NFA + K +PE+ S S L ++D+
Sbjct: 296 ---RDNFAYAREFLAKEVPEVKVLDSNASYLAWVDI 328
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 78 GLPLTRRAIAEYL--SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP R+AIA+++ +R + P V + G T A + + L+ PG L+P P +P
Sbjct: 84 GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 136 IYELSAAFR--------HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
+ +R H E + + K + ++ + ++ L++ NP NP G
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQK-SNIKVKGLILTNPSNPLG 202
Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG--------VFGSTVPILT 239
L+ + N+ ++ DE+Y VF FV + + + +
Sbjct: 203 TTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI 262
Query: 240 LGSLSKRWIVPGWRLG 255
+ SLSK +PG+R+G
Sbjct: 263 VYSLSKDMGLPGFRVG 278
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 78 GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP ++A+ ++++ K+T PN + +T+G T A + + L+ PG +L+P P +P
Sbjct: 70 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 129
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
++ +R +E+ G+ E L++ A++ + +++ NP NP G
Sbjct: 130 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 189
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTV--PILTLGSLSK 245
+ L L +I+DE+Y F F+ M V V + + SLS
Sbjct: 190 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQRVHVVYSLSX 249
Query: 246 RWI-VPGWRLGWFVTTD 261
+ + +PG+R+G + D
Sbjct: 250 KDLGLPGFRVGAIYSND 266
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 89/238 (37%), Gaps = 20/238 (8%)
Query: 36 KVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95
++ISL GD T E + GY G R+AIAE RDL
Sbjct: 71 QLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKTLRKAIAETFYRDLH 130
Query: 96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF------------ 143
K N+VFV+ G I + LL I + P FP Y S+
Sbjct: 131 VK--SNEVFVSDGAQSDIS-RLQLLLGSNVTIAVQDPTFPAYIDSSVIIGQTGHFHEKTK 187
Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
++ V + P+ + DL T + +P NP G V S + L +L + A
Sbjct: 188 KYQNVVYMPCGPNNSFFPDL-----AMTPRTDVIFFCSPNNPTGYVASRKQLHQLVDFAK 242
Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
+++I D Y + P + G+ + + S SK G RLGW + D
Sbjct: 243 TNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWSIIPD 300
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 78 GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP ++A+ ++++ K+T PN + +T+G T A + + L+ PG +L+P P +P
Sbjct: 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
++ +R +E+ G+ E L++ A++ + +++ NP NP G
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
+ L L +I+DE+Y F F+ M V S V +
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 266
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
+ SLSK +PG+R+G + D
Sbjct: 267 VVYSLSKDLGLPGFRVGAIYSND 289
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 78 GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP ++A+ ++++ K+T PN + +T+G T A + + L+ PG +L+P P +P
Sbjct: 85 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 144
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
++ +R +E+ G+ E L++ A++ + +++ NP NP G
Sbjct: 145 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 204
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
+ L L +I+DE+Y F F+ M V S V +
Sbjct: 205 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 264
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
+ SLSK +PG+R+G + D
Sbjct: 265 VVYSLSKDLGLPGFRVGAIYSND 287
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 29/215 (13%)
Query: 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
GY GLP R+ IA L P V +T G + +A L G + +
Sbjct: 63 GYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGA 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI---------ESLADQNTVALVIINP 182
PG+P Y R I +R L+P VDL A + L + +P
Sbjct: 123 PGYPSY------RQI-LRALGLVP-----VDLPTAPENRLQPVPADFAGLDLAGLXVASP 170
Query: 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242
NP G + L E A I+DE+Y + + K + + T + S
Sbjct: 171 ANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL---TDECYVINS 227
Query: 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277
SK + GWR+GW V + + +VVER+ +
Sbjct: 228 FSKYFSXTGWRVGWXVVPE-----DQVRVVERIAQ 257
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 78 GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
GLP ++A+ ++++ K+T PN + +T+G T A + + L+ PG +L+P P +P
Sbjct: 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
++ +R +E+ G+ E L++ A++ + +++ NP NP G
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
+ L L +I+DE+Y F F+ M V S V +
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 266
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
+ SLSK +PG+R+G + D
Sbjct: 267 VVYSLSKDLGLPGFRVGAIYSND 289
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
PGF Y + A E+R + L GW++ +E+L + L + P NP G +
Sbjct: 106 PGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPE 164
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251
LQ +A+ L +I DE + + + F+P I L SL+K + +PG
Sbjct: 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPG 222
Query: 252 WRLGWFVTTDPCGMFR 267
RLG+ V +D M R
Sbjct: 223 LRLGYLVNSDDAAMAR 238
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 91/239 (38%), Gaps = 24/239 (10%)
Query: 34 EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
+ +VISL +GD T E ++GY G R AIA+
Sbjct: 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
L + +DVFV+ G I + G+N I + P +P Y S+
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVMF---GSNVTIAVQDPSYPAYVDSSVIMGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
++ + + P+ G+ DL + T + +P NP G + + L +L
Sbjct: 170 TDVQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
E A K ++++ D Y + D P + G+ + S SK G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTV 283
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 91/239 (38%), Gaps = 24/239 (10%)
Query: 34 EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
+ +VISL +GD T E ++GY G R AIA+
Sbjct: 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
L + +DVFV+ G I + G+N I + P +P Y S+
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVMF---GSNVTIAVQDPSYPAYVDSSVIMGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
++ + + P+ G+ DL + T + +P NP G + + L +L
Sbjct: 170 TDVQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
E A K ++++ D Y + D P + G+ + S S+ G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTV 283
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 14/206 (6%)
Query: 68 EKFNGYAPTAGLPLTRRAIAEYLSR--DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA 125
+ Y TAGLP R+A A +L R D N++ G +A+ + + P +
Sbjct: 57 HELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVS 116
Query: 126 N-----ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
+ I+ P P + IYE + E+ HF P + D I + T + +
Sbjct: 117 DGIKPAIVSPNPFYQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVC 175
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPF----VPMGVFGSTV 235
+P NP G+V +++ + +K ++ +DE Y + F G+KP + S
Sbjct: 176 SPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQ 235
Query: 236 PILTLGSLSKRWIVPGWRLGWFVTTD 261
+L SLS R VPG R G FV D
Sbjct: 236 KLLXFTSLSXRSNVPGLRSG-FVAGD 260
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 90/239 (37%), Gaps = 24/239 (10%)
Query: 34 EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
+ +VISL +GD T E ++GY G R AIA+
Sbjct: 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
L + +DVFV+ G I + G+N I + P +P Y S+
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVMF---GSNVTIAVQDPSYPAYVDSSVIMGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
++ + + P+ G+ DL + T + +P NP G + + L +L
Sbjct: 170 TDVQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
E A K ++++ D Y + D P + G+ + S S G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTV 283
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 20/194 (10%)
Query: 72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
G P ++I YL KL + + +G ++ I+++++L + IL+
Sbjct: 56 GVYPDVNYRRLNKSIENYL------KLKDIGIVLGNGASEIIELSISLFEK----ILIIV 105
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG---N 188
P + YE++A + V F L D+ +D +DI S D + +++I NP NP G N
Sbjct: 106 PSYAEYEINAKKHGVSVV-FSYL-DENMCIDYEDIISKID-DVDSVIIGNPNNPNGGLIN 162
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248
+ H+ KLAE K KT++I DE + GD +G + + + +++K +
Sbjct: 163 KEKFIHVLKLAEE--KKKTIII-DEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFA 218
Query: 249 VPGWRLGWFVTTDP 262
+PG R G+ +T +
Sbjct: 219 MPGIRFGYGITNNK 232
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 89/239 (37%), Gaps = 24/239 (10%)
Query: 34 EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
+ +VISL +GD T E ++GY G R AIA+
Sbjct: 55 DAQVISLGIGDTTEPIPEVITSAXAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
L + +DVFV+ G I G+N I + P +P Y S+
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVXF---GSNVTIAVQDPSYPAYVDSSVIXGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
++ + + P+ G+ DL + T + +P NP G + + L +L
Sbjct: 170 TDVQKYGNIEYXRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
E A K ++++ D Y D P + G+ S SK G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWTV 283
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
+A+ ++ ++ Y + D+ G AI +A+ S G +L+ P + Y +
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVY--YPFARTI 160
Query: 144 R---HIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
R H V + + + +E+D + +E + D N ++ +P NP G V+ L K+A
Sbjct: 161 RLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIA 220
Query: 200 ETANKLKTLVIADEVYGHL-VFGD 222
E K ++++DE++ L +FG+
Sbjct: 221 ELCKKHGVILVSDEIHQDLALFGN 244
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
++ + +++ + + + + T+G A+ A+ ++PG +++ P + + ++
Sbjct: 72 KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK 131
Query: 143 FRHIEVRHFDLLPDKGW-EVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
+ ++ +LL G+ +D +E L+ D+N AL+ +P NP G V+ LQK+ +
Sbjct: 132 NQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKD 191
Query: 201 TANKLKTLVIADEVYGHLV 219
K ++ +DE++ L+
Sbjct: 192 IVLKSDLMLWSDEIHFDLI 210
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--LSA 141
+I +L R +K+ + + G AI + + L++ I++ P + + +
Sbjct: 74 ESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKN 133
Query: 142 AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
R + + L + + +D +DIE+ ++ ++ NP NP G V++ L+KL +
Sbjct: 134 NNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGDI 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMG 229
K +I+DE++ ++ +PM
Sbjct: 193 CLKHNVKIISDEIHSDIILKKHKHIPMA 220
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/157 (17%), Positives = 66/157 (42%), Gaps = 3/157 (1%)
Query: 86 IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAF 143
I + + + + + ++G A+ ++ ++ ++L+ P +P + ++
Sbjct: 68 ICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNN 127
Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
R + V D + +D + +E Q ++ +P NP G V+ + L KL
Sbjct: 128 RQLCVSPLQKQNDT-YAIDFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEELTKLGSLCT 186
Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
K +V+ADE++ +++ D P + T+
Sbjct: 187 KYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTI 223
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 15/192 (7%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
Y+PT G R +AE++ + P +V +T+G QA+D+ + G+ +LL P
Sbjct: 70 YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG--NPCGNVY 190
+ AFR ++ F +P DLD +E + + + + P NP G +
Sbjct: 124 SY--MGAIQAFR-LQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV---PILTLGSLSKRW 247
++L + + +V+ D+ Y L FG+ + ++ LGS SK
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 248 IVPGWRLGWFVT 259
+ PG R+ + V
Sbjct: 240 LSPGLRVAFAVA 251
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP------DKGWEVDLDDIES-LADQN 173
S G +++ P + A ++ IE ++P GW D+ +E+ LA
Sbjct: 108 SETGEGVVIHTPAY-----DAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPE 162
Query: 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFG 232
+++ +P NP G V++ L+ +A+ + VI+DE++ +V+G++P +P V
Sbjct: 163 CKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVAR 222
Query: 233 STVPILTLGSLS 244
+LT GS S
Sbjct: 223 GDWALLTSGSKS 234
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
R+ +A++ Y+L ++ T+G + I++ +L N + P F Y +A
Sbjct: 73 RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
EVR LL D E DL+ + D+ T + I NP NP GN +Q +
Sbjct: 127 IEGAEVREIPLLQD--GEHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184
Query: 203 NKLKTLVIADEVY 215
LV+ DE Y
Sbjct: 185 PS-DVLVVLDEAY 196
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 15/244 (6%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
R +A Y+++ +T ++++ +G + + + PG L +P + ++ + A
Sbjct: 75 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
H E D + +D+D +E + + + + P NP G+V S ++++
Sbjct: 135 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
A +VI DE Y F P + ++ ++SK + G RLG+FV +
Sbjct: 193 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFV-AN 246
Query: 262 PCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIH----GNFLENFAGS 317
P F ++ R+ + L A + + L T+ ++ + LE +
Sbjct: 247 PA--FIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELGYA 304
Query: 318 CVPS 321
VPS
Sbjct: 305 VVPS 308
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 15/244 (6%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
R +A Y+++ +T ++++ +G + + + PG L +P + ++ + A
Sbjct: 72 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 131
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
H E D + +D+D +E + + + + P NP G+V S ++++
Sbjct: 132 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 189
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
A +VI DE Y F P + ++ ++SK + G RLG+FV +
Sbjct: 190 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFV-AN 243
Query: 262 PCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIH----GNFLENFAGS 317
P F ++ R+ + L A + + L T+ ++ + LE +
Sbjct: 244 PA--FIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELGYA 301
Query: 318 CVPS 321
VPS
Sbjct: 302 VVPS 305
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 90/232 (38%), Gaps = 15/232 (6%)
Query: 31 EKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL 90
E + VI+L++GD T GY P GLP R+ ++E
Sbjct: 29 ENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDF 88
Query: 91 SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAFRHIEVR 149
R + ++F++ G + ++ P + + P +P Y +++ E+
Sbjct: 89 YRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDPSYPAYLDIARLTGAKEII 144
Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
L + + + + D + L + +P NP G V + L+ + A + + L+
Sbjct: 145 ALPCLQENAFFPEFPE-----DTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILI 199
Query: 210 IADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFV 258
+ D Y F P +P +F + + + S SK G RLGW V
Sbjct: 200 LFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTV 249
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
Y+ T G P+ ++ I + L R L +++ T G QA+D+ L + +L
Sbjct: 81 YSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140
Query: 132 PGFPIYELSA--AFRHIEVRHFDLLPDKGWEVDLDDIE---SLADQN------TVALVII 180
P + L A AFR + +F ++P + DL+ +E S D+N V+
Sbjct: 141 PAY----LGAINAFRQY-LANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVS 195
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
N NP G S + + L E A K ++ D+ YG L + + P+ G ++ L
Sbjct: 196 NFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLL 255
Query: 241 GSLSKRWIVPGWRLG 255
+ SK + PG R+G
Sbjct: 256 NTFSK-VLAPGLRIG 269
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 100/244 (40%), Gaps = 15/244 (6%)
Query: 83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
R +A Y+++ +T ++++ +G + + + PG L +P + ++ + A
Sbjct: 75 RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
H E D + +D+D +E + + + + P NP G+V S ++++
Sbjct: 135 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
A +VI DE Y F P + ++ ++S + G RLG+FV +
Sbjct: 193 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFV-AN 246
Query: 262 PCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIH----GNFLENFAGS 317
P F ++ R+ + L A + + L T+ ++ + LE +
Sbjct: 247 PA--FIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELGYA 304
Query: 318 CVPS 321
VPS
Sbjct: 305 VVPS 308
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 20/225 (8%)
Query: 67 SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV--AMALLSRPG 124
+ N Y +A R A + R +L N++ T G + + + L
Sbjct: 49 THSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQN 108
Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PG 183
I P P + IYE +A F ++ LL E D + + V LVI+N P
Sbjct: 109 PTIAYPNPFYQIYEGAAKF----IKAKSLLXPLTKENDFTPSLNEKELQEVDLVILNSPN 164
Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP---FVPMGVFGSTV--PIL 238
NP G S + L + A K ++I DE Y + P + G+ +L
Sbjct: 165 NPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVL 224
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG 283
+ SLSKR PG R G F+ D +++E+ K + LG
Sbjct: 225 VIHSLSKRSSAPGLRSG-FIAGD-------SRLLEKYKAFRAYLG 261
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 43/247 (17%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F G P F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G ++ S SK I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQVCI 293
TF Q+ I
Sbjct: 297 TFNQLMI 303
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 29/173 (16%)
Query: 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV----RHFDLLPDK 157
+V + +G + I +RPGA + P PGF Y SA F +E D D+
Sbjct: 87 EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRADFTLDR 146
Query: 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVY 215
G + + A+ + + P NP GN++ + + A ++LV+ DE Y
Sbjct: 147 GAX-----LAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAY 201
Query: 216 GHLVFGDKPFVP------MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
+PF + FG+ + T+ L + G RLG +V DP
Sbjct: 202 -------QPFAQESWXSRLTDFGNLLVXRTVSKLG----LAGIRLG-YVAGDP 242
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 43/247 (17%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F G P F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G ++ S SK I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQVCI 293
TF Q+ I
Sbjct: 297 TFNQLMI 303
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 43/247 (17%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G ++ S SK I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQVCI 293
TF Q+ I
Sbjct: 297 TFNQLMI 303
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 35/243 (14%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPD------KGWEVDLDDIESLADQNT 174
N+LL P + ++ L ++ ++PD W+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVPMGVF 231
+ N NP GN + + +++ E A K L+I D+ Y L F F+ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQ 290
G ++ S SK I G R+G+ P ++ER+ + + P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 291 VCI 293
+ I
Sbjct: 301 LMI 303
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160
+ G + + + L+ P +LLP +P Y A R +R F L+P + E
Sbjct: 88 REALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSY--FGAARVASLRTF-LIPLR--E 142
Query: 161 VDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217
L D++++ + + L++ P NP G V + + ++ A K +I D Y
Sbjct: 143 DGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVD 202
Query: 218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
V+ + P+ + G+ ++ L SLSK + + G+RLG+ + ++
Sbjct: 203 QVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE 246
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 43/247 (17%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
N+LL P + ++ L ++ ++PD L DI S +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
NT + + N NP GN + + +++ E A K L+I D+ Y L F F+
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
M V G ++ S SK I G R+G+ P ++ER+ + + P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQVCI 293
TF Q+ I
Sbjct: 297 TFNQLMI 303
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 26/248 (10%)
Query: 26 QSVDDEKN-EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRR 84
+ EKN + K+ISL +GD T E ++GY G R
Sbjct: 59 RKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALRE 118
Query: 85 AIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAF 143
A+A +++F++ G I + M S+P + + P +P+Y ++
Sbjct: 119 AVASTFYGHA--GRAADEIFISDGSKCDIARIQMMFGSKP--TVAVQDPSYPVYVDTSVM 174
Query: 144 RHIEVRH----FDLL------PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193
+ H FD + PD + DL + T + +P NP G +
Sbjct: 175 MGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRA 229
Query: 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVP 250
L +L A K ++++ D Y + P P ++ G+ + S SK
Sbjct: 230 QLTELVNFARKNGSILVYDAAYALYI--SNPDCPKTIYEIPGADEVAIETCSFSKYAGFT 287
Query: 251 GWRLGWFV 258
G RLGW V
Sbjct: 288 GVRLGWTV 295
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 32/201 (15%)
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVTSGCTQAI-----DVAMALLSRPGAN 126
P L ++ + + +Y+ R++ P D+F G T A+ + ++ L + G
Sbjct: 136 PPRMLTVSEQIVRQYIVREMAGGAVPPESVDLFAVEGGTAAMAYIFESLRISGLLKAGDK 195
Query: 127 ILLPRPGF-PIYELSAAFRHIEVRHFDLL-------PDKGWEVDLDDIESLADQNTVALV 178
+ + P F P E+ E+ +DL PD GW+ +++ L D +
Sbjct: 196 VAIGMPVFTPYIEIP------ELAQYDLKEVPIHADPDNGWQYSDAELDKLKDPDVKIFF 249
Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLK--TLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
+NP NP + L ++ + + L++ D+VYG F D+ S P
Sbjct: 250 CVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYG--TFADE----FQSLFSVCP 303
Query: 237 ILTL--GSLSKRWIVPGWRLG 255
TL S SK + GWRLG
Sbjct: 304 RNTLLVYSFSKYFGATGWRLG 324
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPD------KGWEVDLDDIESLADQNT 174
N+LL P + ++ L ++ ++PD W+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVPMGVF 231
+ N NP GN + + +++ E A K L+I D+ Y L F F+ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQ 290
G + + + I G R+G+ P ++ER+ + + P+TF Q
Sbjct: 253 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 291 VCI 293
+ I
Sbjct: 301 LMI 303
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 73 YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
Y+P+AG+P L + I + + Y + D+ VTSG Q + ++ PG
Sbjct: 76 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 135
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPD------KGWEVDLDDIESLADQNT 174
N+LL P + ++ L ++ ++PD W+ + D +
Sbjct: 136 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 194
Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVPMGVF 231
+ N NP GN + + +++ E A K L+I D+ Y L F F+ M V
Sbjct: 195 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 254
Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQ 290
G + + + I G R+G+ P ++ER+ + + P+TF Q
Sbjct: 255 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 302
Query: 291 VCI 293
+ I
Sbjct: 303 LMI 305
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220
+DL +E + NP NP G VYS + + ++A A + VIAD++Y L +
Sbjct: 167 LDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRY 226
Query: 221 GDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLG 255
+ + + ++T+ S + G+RLG
Sbjct: 227 AGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 4/188 (2%)
Query: 73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPR 131
Y G ++AI ++ R L D V + G + + PG +LLP
Sbjct: 81 YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPD 140
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
PG+ Y + +L P + D ++S T + + P NP G+ +
Sbjct: 141 PGYTDYLAGVLLADGKPVPLNLEPPH-YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTAT 199
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFGSTVPILTLGSLSKRWIVP 250
+ + T ++ D YG F K P + G V I + SLSK +
Sbjct: 200 KEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAI-EIYSLSKGYNXS 258
Query: 251 GWRLGWFV 258
G+R+G+ V
Sbjct: 259 GFRVGFAV 266
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
+ +LLP+ ++ +D + T + + P NP GNV + + L KL AN+ +
Sbjct: 157 NIELLPEGQFKYHVDFEHLHIGEETGXICVSRPTNPTGNVITDEELXKLDRLANQHNIPL 216
Query: 210 IADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGWFVTTD 261
+ D YG PF P +F P I+ SLSK + PG R G + D
Sbjct: 217 VIDNAYG------VPF-PGIIFSEARPLWNPNIILCXSLSKLGL-PGSRCGIIIAND 265
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 73 YAPTAGLPLTRRAIAEY----LSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL 128
Y GLP ++ + + ++ D+P + V GC + VA L
Sbjct: 78 YPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSXQGCFVSFLVANRTHKNREYGTL 137
Query: 129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCG 187
PGF + +L + FDL +G ++ + +ES L +++ NP NP
Sbjct: 138 FIDPGFNLNKLQCRILGQKFESFDLFEYRGEKL-REKLESYLQTGQFCSIIYSNPNNPTW 196
Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVY 215
+ + L+ + E A K +VI D Y
Sbjct: 197 QCXTDEELRIIGELATKHDVIVIEDLAY 224
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 26/198 (13%)
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSGCTQAI-----DVAMALLSRPGAN 126
P L ++ + + +Y+ R++ P++ +F G T A+ + + L + G
Sbjct: 137 PPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDK 196
Query: 127 ILLPRPGF-PIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
+ + P F P E+ ++ +E + P W+ +++ L D +NP N
Sbjct: 197 VAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSN 256
Query: 185 PCGNVYSYQHLQKLAE--TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI----- 237
P + L+++ ++ +++ D+VYG F D F S I
Sbjct: 257 PPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFADD-------FQSLFAICPENT 307
Query: 238 LTLGSLSKRWIVPGWRLG 255
L + S SK + GWRLG
Sbjct: 308 LLVYSFSKYFGATGWRLG 325
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 82/198 (41%), Gaps = 26/198 (13%)
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSGCTQAI-----DVAMALLSRPGAN 126
P L ++ + + +Y+ R++ P++ +F G T A+ + + L + G
Sbjct: 137 PPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDK 196
Query: 127 ILLPRPGF-PIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
+ + P F P E+ ++ +E + P W+ +++ L D +NP N
Sbjct: 197 VAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSN 256
Query: 185 PCGNVYSYQHLQKLAE--TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI----- 237
P + L+++ ++ +++ D+VYG F D F S I
Sbjct: 257 PPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG--TFADD-------FQSLFAICPENT 307
Query: 238 LTLGSLSKRWIVPGWRLG 255
L + S SK + GWRLG
Sbjct: 308 LLVYSFSKYFGATGWRLG 325
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 16/193 (8%)
Query: 75 PTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSGCTQAI-----DVAMALLSRPGAN 126
P L ++ + + +Y+ R++ P++ +F G T A+ + + L + G
Sbjct: 137 PPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESMKVNGLLKAGDK 196
Query: 127 ILLPRPGF-PIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
+ + P F P E+ ++ +E + P W+ +++ L D +NP N
Sbjct: 197 VAIGMPVFTPYIEIPELAQYALEEVAINADPALNWQYPDSELDKLKDPAIKIFFCVNPSN 256
Query: 185 PCGNVYSYQHLQKLAE--TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242
P + L+++ + ++ +++ D+VYG G + + L + S
Sbjct: 257 PPSVKMDERSLERVRKIVAEHRPDLMILTDDVYGTFADGFQSLFAI----CPANTLLVYS 312
Query: 243 LSKRWIVPGWRLG 255
SK + GWRLG
Sbjct: 313 FSKYFGATGWRLG 325
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 63/162 (38%), Gaps = 33/162 (20%)
Query: 85 AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--------------ILLP 130
A+ + +R + LT ++ +T+G A L N ILLP
Sbjct: 91 ALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLP 150
Query: 131 RPGFPIYELSAAFRHIEVRHF-------DLLPDKGWE------VDLDDIE---SLADQNT 174
P Y + + H+E +HF D + G E VD + +E +L +
Sbjct: 151 LT--PEY-IGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRI 207
Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216
A+ P NP GNV + + LAE A + +I D YG
Sbjct: 208 GAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYG 249
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 28/179 (15%)
Query: 86 IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRH 145
I YL D L+ N+V V +G + I V M + R ++ P P + Y + A
Sbjct: 77 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAK--- 126
Query: 146 IEVRHFDLLPDKGWEVDLDDIESLADQNT---VALVIINPGNPCGNVYSYQHLQKLAETA 202
+ K EV L + + N + I NP NP G+V+ + ++++ +T
Sbjct: 127 -------AVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTG 179
Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
V DE Y F + +V + + + SK + + R+G+ V ++
Sbjct: 180 ----AFVALDEAYYE--FHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 230
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 28/179 (15%)
Query: 86 IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRH 145
I YL D L+ N+V V +G + I V M + R ++ P P + Y + A
Sbjct: 65 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAK--- 114
Query: 146 IEVRHFDLLPDKGWEVDLDDIESLADQNT---VALVIINPGNPCGNVYSYQHLQKLAETA 202
+ K EV L + + N + I NP NP G+V+ + ++++ +T
Sbjct: 115 -------AVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTG 167
Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
V DE Y F + +V + + + SK + + R+G+ V ++
Sbjct: 168 ----AFVALDEAYYE--FHGESYVDF--LKKYENLAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|3MC6|C Chain C, Crystal Structure Of Scdpl1
Length = 497
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185
I+ P ++ +A + +++RH +L P ++VDL ++ ++NTV LV P P
Sbjct: 160 EIIAPVTAHAGFDKAAYYFGMKLRHVELDPTT-YQVDLGKVKKFINKNTVLLVGSAPNFP 218
Query: 186 CGNVYSYQHLQKLAE 200
G + L K+A+
Sbjct: 219 HGIADDIEGLGKIAQ 233
>pdb|3MC6|A Chain A, Crystal Structure Of Scdpl1
Length = 497
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185
I+ P ++ +A + +++RH +L P ++VDL ++ ++NTV LV P P
Sbjct: 160 EIIAPVTAHAGFDKAAYYFGMKLRHVELDPTT-YQVDLGKVKKFINKNTVLLVGSAPNFP 218
Query: 186 CGNVYSYQHLQKLAE 200
G + L K+A+
Sbjct: 219 HGIADDIEGLGKIAQ 233
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 26/189 (13%)
Query: 69 KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANI 127
+ N Y P P R +AE+ S P D + + G + D A S
Sbjct: 44 RINRY-PFDAEPRVXRKLAEHFS-------CPEDNLXLVRGIDECFDRISAEFS--SXRF 93
Query: 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
+ PGF Y A + RHF++ +D +D+ ++ + V V+ NP NP G
Sbjct: 94 VTAWPGFDGYRARIAVSGL--RHFEIGLTDDLLLDPNDLAQVSRDDCV--VLANPSNPTG 149
Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV-FGSTVPILTLGSLSKR 246
S L +L + A KL + DE Y F G+ +G L S SK
Sbjct: 150 QALSAGELDQLRQRAGKL----LIDETYVDY----SSFRARGLAYGENE--LVFRSFSKS 199
Query: 247 WIVPGWRLG 255
+ + G RLG
Sbjct: 200 YGLAGLRLG 208
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L+ + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLMY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTLGSLS 244
MG+ +VP+ L ++
Sbjct: 182 AAEMGLVNESVPLAQLREVT 201
>pdb|2NXW|A Chain A, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2NXW|B Chain B, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2Q5J|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5J|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5L|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5L|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5O|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5O|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5Q|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
pdb|2Q5Q|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
Length = 565
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 156 DKGWEVDLDDIESLADQNTVALVIINPGNP----CGNVYSYQHLQKLAETANKLKTLVIA 211
D W VD D + + AD+ A+ + +P C V Y K+AE A +L V+
Sbjct: 198 DPAWPVDRDALAACADEVLAAMR--SATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVT 255
Query: 212 DEVYGHLVFGDKPFVPMGVF 231
G + D P P+G +
Sbjct: 256 -TFMGRGLLADAPTPPLGTY 274
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
+ I NP NP G+V+ + ++++ +T V DE Y F + +V
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKTG----AFVALDEAYYE--FHGESYVDF--LKKYEN 193
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTD 261
+ + + SK + + R+G+ V ++
Sbjct: 194 LAVIRTFSKAFSLAAQRVGYVVASE 218
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTLGSLS 244
MG+ +VP+ L ++
Sbjct: 182 AAEMGLVNESVPLAQLREVT 201
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTLGSLS 244
MG+ +VP+ L ++
Sbjct: 182 AAEMGLVNESVPLAQLREVT 201
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTLGSLS 244
MG+ +VP+ L ++
Sbjct: 182 AAEMGLVNESVPLAQLREVT 201
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINYGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTLGSLS 244
MG+ +VP+ L ++
Sbjct: 182 AAEMGLVNESVPLAQLREVT 201
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTLGSLS 244
MG+ +VP+ L ++
Sbjct: 182 AAEMGLVNESVPLAQLREVT 201
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTLGSLS 244
MG+ +VP+ L ++
Sbjct: 182 AAEMGLVNESVPLAQLREVT 201
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINYGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTLGSLS 244
MG+ +VP+ L ++
Sbjct: 182 AAEMGLVNESVPLAQLREVT 201
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
D+ AD+ T L IN G P GN+ S + +A+T ++L + FG +
Sbjct: 129 DLAICADEATFGLSEINWGIPPGNLVS----KAMADTVGHRQSLYY---IMTGKTFGGQK 181
Query: 225 FVPMGVFGSTVPILTLGSLS 244
MG+ +VP+ L ++
Sbjct: 182 AAEMGLVNESVPLAQLREVT 201
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,151,183
Number of Sequences: 62578
Number of extensions: 407684
Number of successful extensions: 1065
Number of sequences better than 100.0: 103
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 906
Number of HSP's gapped (non-prelim): 105
length of query: 343
length of database: 14,973,337
effective HSP length: 100
effective length of query: 243
effective length of database: 8,715,537
effective search space: 2117875491
effective search space used: 2117875491
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)